Your job contains 1 sequence.
>psy10021
MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDTTEALAAT
TAAVEGKLCKKLKKVLKSLVSSDVQENLLVADTKRAAYPSLGTTVLLYPYSWSGSSSNAA
AKHFHNSFVINIKKPKKSSSSSKHHHHATSKKNASVTHATPSVETGHTKPLRAKRKHQLK
LKRFKQTLCRRDFCSNTQILMKIILNRCVQLIGQSSTKNKGKMARMLAAKAALATRVDAL
GEDSSIELGTDHRAKLEIKLRLLEEGNLRRLSGTTKAKAKLEKYHGKRLEKKKFKTEFDA
AEETPATPDTSSSGKKKKKNKNLDTSIVKAEPEDEPAAADVSLSKKKKKKKTQDEEEPVE
EGGEEEEVSKKKKKKKKKDVEDETDPLNHVGLAHSLSRYKLKFSPDKVDTMIVQAVSLLD
DLDKELNNYMMRCREWYGWHFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVD
TMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNLKRNDNSTRDKTSASDLS
EILPEDVEEKVKEAAEISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVA
PNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHPASTVQIL
GAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKMGSYGWQPGSASRARVTP
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10021
(716 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
WB|WBGene00020915 - symbol:nol-5 species:6239 "Caenorhabd... 618 7.0e-95 3
UNIPROTKB|E1BUS2 - symbol:NOP58 "Uncharacterized protein"... 724 3.8e-93 2
FB|FBgn0026196 - symbol:nop5 "nop5" species:7227 "Drosoph... 692 7.0e-92 2
UNIPROTKB|F1N218 - symbol:NOP58 "Uncharacterized protein"... 679 2.7e-86 2
UNIPROTKB|I3LDD2 - symbol:NOP58 "Uncharacterized protein"... 676 4.4e-86 2
UNIPROTKB|Q9Y2X3 - symbol:NOP58 "Nucleolar protein 58" sp... 676 5.7e-86 2
MGI|MGI:1933184 - symbol:Nop58 "NOP58 ribonucleoprotein" ... 668 4.0e-85 2
RGD|620484 - symbol:Nop58 "NOP58 ribonucleoprotein" speci... 666 6.4e-85 2
POMBASE|SPAC23G3.06 - symbol:SPAC23G3.06 "U3 snoRNP prote... 655 1.6e-75 2
TAIR|locus:2096214 - symbol:AT3G05060 "AT3G05060" species... 612 1.4e-72 2
TAIR|locus:2181211 - symbol:AT5G27120 "AT5G27120" species... 603 1.1e-70 2
DICTYBASE|DDB_G0268098 - symbol:nop58 "nucleolar protein ... 614 1.8e-70 2
ASPGD|ASPL0000037939 - symbol:nop58 species:162425 "Emeri... 600 2.9e-68 2
UNIPROTKB|G4MPA1 - symbol:MGG_07008 "Nucleolar protein no... 598 2.0e-67 2
SGD|S000005837 - symbol:NOP58 "Protein involved in pre-rR... 608 2.7e-59 1
GENEDB_PFALCIPARUM|PF10_0085 - symbol:PF10_0085 "nucleola... 538 3.3e-59 2
UNIPROTKB|Q8IJV7 - symbol:PF10_0085 "Nucleolar protein NO... 538 3.3e-59 2
SGD|S000004187 - symbol:NOP56 "Nucleolar protein componen... 482 6.0e-50 2
CGD|CAL0000142 - symbol:SIK1 species:5476 "Candida albica... 478 1.6e-49 2
UNIPROTKB|Q5ACS3 - symbol:SIK1 "Putative uncharacterized ... 478 1.6e-49 2
POMBASE|SPBC646.10c - symbol:SPBC646.10c "U3 snoRNP prote... 486 2.0e-49 2
TAIR|locus:2205270 - symbol:NOP56 "homolog of nucleolar p... 475 1.8e-48 2
ASPGD|ASPL0000040023 - symbol:AN10352 species:162425 "Eme... 462 4.2e-47 2
TAIR|locus:2087755 - symbol:AT3G12860 species:3702 "Arabi... 468 5.3e-47 2
FB|FBgn0038964 - symbol:Nop56 "Nop56" species:7227 "Droso... 463 6.8e-47 2
UNIPROTKB|Q4KLK7 - symbol:Nol5a "RCG26515, isoform CRA_c"... 464 1.1e-46 2
UNIPROTKB|O00567 - symbol:NOP56 "Nucleolar protein 56" sp... 460 1.1e-46 2
MGI|MGI:1914384 - symbol:Nop56 "NOP56 ribonucleoprotein" ... 463 1.4e-46 2
UNIPROTKB|E2QU53 - symbol:NOP56 "Uncharacterized protein"... 460 2.3e-46 2
UNIPROTKB|F1MW06 - symbol:NOP56 "Nucleolar protein 56" sp... 457 4.7e-46 2
ZFIN|ZDB-GENE-040109-1 - symbol:nop56 "NOP56 ribonucleopr... 453 6.0e-46 2
UNIPROTKB|Q3SZ63 - symbol:NOP56 "Nucleolar protein 56" sp... 457 1.2e-45 2
DICTYBASE|DDB_G0285679 - symbol:nol5a "NOP5 family protei... 432 8.6e-45 2
RGD|1308892 - symbol:Nop56 "NOP56 ribonucleoprotein" spec... 464 5.0e-44 1
WB|WBGene00010627 - symbol:K07C5.4 species:6239 "Caenorha... 428 2.0e-43 2
UNIPROTKB|H9L0K4 - symbol:H9L0K4 "Uncharacterized protein... 453 7.3e-43 1
UNIPROTKB|G4N2E5 - symbol:MGG_07915 "Uncharacterized prot... 405 1.5e-41 2
UNIPROTKB|Q97ZH3 - symbol:SSO0939 "Pre mRNA splicing prot... 339 2.9e-30 1
UNIPROTKB|Q58105 - symbol:MJ0694 "Uncharacterized NOP5 fa... 299 6.0e-25 1
UNIPROTKB|E7EN72 - symbol:PRPF31 "U4/U6 small nuclear rib... 228 4.7e-24 2
UNIPROTKB|F1RNI3 - symbol:PRPF31 "Uncharacterized protein... 232 2.5e-20 3
MGI|MGI:1916238 - symbol:Prpf31 "PRP31 pre-mRNA processin... 232 5.1e-20 2
UNIPROTKB|E7ESA8 - symbol:PRPF31 "U4/U6 small nuclear rib... 228 8.0e-20 2
UNIPROTKB|Q5U5C5 - symbol:prpf31 "U4/U6 small nuclear rib... 227 9.2e-20 2
UNIPROTKB|E7EVX8 - symbol:PRPF31 "U4/U6 small nuclear rib... 228 1.4e-19 2
UNIPROTKB|E1BM48 - symbol:PRPF31 "Uncharacterized protein... 228 1.4e-19 2
UNIPROTKB|F1PKI0 - symbol:PRPF31 "Uncharacterized protein... 228 1.4e-19 2
UNIPROTKB|Q8WWY3 - symbol:PRPF31 "U4/U6 small nuclear rib... 228 1.4e-19 2
UNIPROTKB|Q6NVP6 - symbol:prpf31 "U4/U6 small nuclear rib... 227 1.5e-19 2
ZFIN|ZDB-GENE-040426-1561 - symbol:prpf31 "PRP31 pre-mRNA... 229 1.1e-18 2
UNIPROTKB|E7ESX0 - symbol:PRPF31 "U4/U6 small nuclear rib... 228 4.0e-18 1
UNIPROTKB|E7EU94 - symbol:PRPF31 "U4/U6 small nuclear rib... 228 4.0e-18 1
FB|FBgn0036487 - symbol:Prp31 species:7227 "Drosophila me... 204 3.5e-13 2
DICTYBASE|DDB_G0289595 - symbol:prpf31 "pre-mRNA processi... 197 1.1e-12 2
WB|WBGene00022458 - symbol:prp-31 species:6239 "Caenorhab... 177 1.2e-12 2
RGD|1305832 - symbol:Prpf31 "PRP31 pre-mRNA processing fa... 176 1.6e-12 1
GENEDB_PFALCIPARUM|PFD0450c - symbol:PFD0450c "pre-mrna s... 198 1.8e-12 1
UNIPROTKB|C0H4A0 - symbol:PFD0450c "Pre-mRNA splicing fac... 198 1.8e-12 1
POMBASE|SPBC119.13c - symbol:prp31 "U4/U6 x U5 tri-snRNP ... 191 2.8e-12 2
TAIR|locus:2195698 - symbol:emb1220 "AT1G60170" species:3... 187 1.2e-11 2
ASPGD|ASPL0000059636 - symbol:AN1260 species:162425 "Emer... 128 4.8e-05 2
SGD|S000003323 - symbol:PRP31 "Splicing factor" species:4... 122 0.00035 1
>WB|WBGene00020915 [details] [associations]
symbol:nol-5 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040019 "positive
regulation of embryonic development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] Pfam:PF01798
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040035 GO:GO:0040019 GO:GO:0040027
eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
KO:K14565 HOGENOM:HOG000196310 OMA:DAHEQLA
GeneTree:ENSGT00550000074998 EMBL:FO081759 PIR:T32941
RefSeq:NP_491134.1 HSSP:O28191 ProteinModelPortal:O45012 SMR:O45012
STRING:O45012 PaxDb:O45012 EnsemblMetazoa:W01B11.3.1
EnsemblMetazoa:W01B11.3.2 EnsemblMetazoa:W01B11.3.3 GeneID:171901
KEGG:cel:CELE_W01B11.3 UCSC:W01B11.3 CTD:171901 WormBase:W01B11.3
InParanoid:O45012 NextBio:873175 Uniprot:O45012
Length = 487
Score = 618 (222.6 bits), Expect = 7.0e-95, Sum P(3) = 7.0e-95
Identities = 133/251 (52%), Positives = 173/251 (68%)
Query: 400 KLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNVAFVKTIK 459
KL K+ +I + +SL D +N M R H +L + ++ + +
Sbjct: 85 KLAVGDAKLGNLIKEKLSLNCVHDSSINELMRGVRA----HIEDL---LAEHKEEMNAMN 137
Query: 460 TIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIV 519
+ +AHSL+RYK+KF+P+K+DTMIVQAVSLLDDLDKELNNY+MR REWYGWHFPELGK +
Sbjct: 138 -LAVAHSLARYKVKFNPEKIDTMIVQAVSLLDDLDKELNNYVMRVREWYGWHFPELGKTI 196
Query: 520 TDNLKR----NDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLC 575
D+ R +DLS ILPE+ ISMGT+ISD D+ +I LC
Sbjct: 197 QDHQAYAKIIKAIGMRQNCINTDLSSILPEELEEKVKEDAEISMGTDISDIDLIHIKGLC 256
Query: 576 DQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQI 635
DQV+E+S+YR QL+DYLK+RM A+APNLT+L+GELVGARL++ AGSL++LAK PAST+QI
Sbjct: 257 DQVIELSAYRAQLFDYLKNRMTALAPNLTVLLGELVGARLISHAGSLVSLAKAPASTIQI 316
Query: 636 LGAEKALFRSL 646
LGAEKALFR+L
Sbjct: 317 LGAEKALFRAL 327
Score = 310 (114.2 bits), Expect = 3.0e-55, Sum P(3) = 3.0e-55
Identities = 56/96 (58%), Positives = 75/96 (78%)
Query: 389 HVGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIV 448
++ +AHSL+RYK+KF+P+K+DTMIVQAVSLLDDLDKELNNY+MR REWYGWHFPELGK +
Sbjct: 137 NLAVAHSLARYKVKFNPEKIDTMIVQAVSLLDDLDKELNNYVMRVREWYGWHFPELGKTI 196
Query: 449 TDNVAFVKTIKTIGLAHSLSRYKLK-FSPDKVDTMI 483
D+ A+ K IK IG+ + L P++++ +
Sbjct: 197 QDHQAYAKIIKAIGMRQNCINTDLSSILPEELEEKV 232
Score = 219 (82.2 bits), Expect = 7.0e-95, Sum P(3) = 7.0e-95
Identities = 44/55 (80%), Positives = 50/55 (90%)
Query: 645 SLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKM 699
SL++LAK PAST+QILGAEKALFRALKTK+DTPKYGLIYH+QLI Q+ K KGKM
Sbjct: 302 SLVSLAKAPASTIQILGAEKALFRALKTKKDTPKYGLIYHAQLITQAPPKVKGKM 356
Score = 140 (54.3 bits), Expect = 7.0e-95, Sum P(3) = 7.0e-95
Identities = 30/66 (45%), Positives = 38/66 (57%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
MLVLFE AGYA FKL +EKKL+ DN++E F T + A + L+L F+KF
Sbjct: 1 MLVLFEVAAGYAVFKLSNEKKLKNVDNIWEEFSTAEKAQENLQLVSFKKFKTTAGAVEAT 60
Query: 61 XXXVEG 66
EG
Sbjct: 61 SEITEG 66
Score = 81 (33.6 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 30/99 (30%), Positives = 43/99 (43%)
Query: 210 QLIGQSSTKNKGXXXXXXXXXXXXXXXVDALGEDSSI-ELGTDHRAKLEIKXXXXXXXXX 268
QLI Q+ K KG +DAL ++S+ E+G + RA LE
Sbjct: 343 QLITQAPPKVKGKMARKLAAKCSLATRIDALSDESATNEIGIECRAALE------NVLRT 396
Query: 269 XXXSGTTKAKAKLEKYHGKRLEKKKFKTEFDAAEETPAT 307
G +K K+ H K E K E+DA+ +TPA+
Sbjct: 397 ESERGPSKNKSFGSHRHDK-YEFKSETYEYDASADTPAS 434
Score = 37 (18.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 278 KAKLEKYHGKRLEKKKFKTEFDAAEE 303
+A+ EK K+ EKK K + D+ EE
Sbjct: 463 EAEPEKKKKKK-EKKAKKADTDSDEE 487
>UNIPROTKB|E1BUS2 [details] [associations]
symbol:NOP58 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0070761 "pre-snoRNP complex" evidence=IEA]
Pfam:PF01798 GO:GO:0005737 GO:GO:0030515 GO:GO:0015030
GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
KO:K14565 CTD:51602 OMA:DAHEQLA GeneTree:ENSGT00550000074998
EMBL:AADN02019867 EMBL:AADN02019868 IPI:IPI00582637
RefSeq:XP_421942.1 UniGene:Gga.12235 PRIDE:E1BUS2
Ensembl:ENSGALT00000013776 GeneID:424087 KEGG:gga:424087
NextBio:20826466 Uniprot:E1BUS2
Length = 527
Score = 724 (259.9 bits), Expect = 3.8e-93, Sum P(2) = 3.8e-93
Identities = 142/191 (74%), Positives = 162/191 (84%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GLAHSLSRYKLKFSPDKVDTMIVQA+SLLDDLDKELNNY+MRCREWYGWHFPELGKI+T
Sbjct: 141 LGLAHSLSRYKLKFSPDKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIIT 200
Query: 521 DNLK-----RNDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLC 575
DNL R R+ S SD+S+ILPE+ ISMGTE+S++DI NI+ LC
Sbjct: 201 DNLTYCKCVRKVGDRRNFAS-SDVSDILPEEIEEDVKAAAEISMGTEVSEEDINNIIHLC 259
Query: 576 DQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQI 635
DQV+EIS YR QLYDYLK+RMMA+APNLT+++GELVGARL+A AGSLLNLAKHPASTVQI
Sbjct: 260 DQVIEISEYRTQLYDYLKNRMMAIAPNLTVMVGELVGARLIAHAGSLLNLAKHPASTVQI 319
Query: 636 LGAEKALFRSL 646
LGAEKALFR+L
Sbjct: 320 LGAEKALFRAL 330
Score = 356 (130.4 bits), Expect = 5.3e-73, Sum P(3) = 5.3e-73
Identities = 67/119 (56%), Positives = 91/119 (76%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GLAHSLSRYKLKFSPDKVDTMIVQA+SLLDDLDKELNNY+MRCREWYGWHFPELGKI+T
Sbjct: 141 LGLAHSLSRYKLKFSPDKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIIT 200
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLK-FSPDKVDTMIVQA--VSLLDDLDKE-LNNYMMRC 504
DN+ + K ++ +G + + + P++++ + A +S+ ++ +E +NN + C
Sbjct: 201 DNLTYCKCVRKVGDRRNFASSDVSDILPEEIEEDVKAAAEISMGTEVSEEDINNIIHLC 259
Score = 248 (92.4 bits), Expect = 5.3e-73, Sum P(3) = 5.3e-73
Identities = 50/67 (74%), Positives = 59/67 (88%)
Query: 634 QILGAEK-ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSS 692
+++GA A SLLNLAKHPASTVQILGAEKALFRALKTKRDTPK+GLIYH+ L+GQ++
Sbjct: 293 ELVGARLIAHAGSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKFGLIYHASLVGQTT 352
Query: 693 TKNKGKM 699
KNKGK+
Sbjct: 353 AKNKGKI 359
Score = 223 (83.6 bits), Expect = 3.8e-93, Sum P(2) = 3.8e-93
Identities = 46/94 (48%), Positives = 55/94 (58%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
MLVLFET AGYA FK+L+EKKLQE D+L++ F+TP+ ANK++KLKHFEKF D
Sbjct: 1 MLVLFETAAGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTTEALAAS 60
Query: 61 XXXVEGXXXXXXXXXXXXXXXXXXQENLLVADTK 94
VEG E L VAD K
Sbjct: 61 TALVEGKLSKNLKKILKKIVAKDAHEQLAVADAK 94
Score = 131 (51.2 bits), Expect = 4.9e-24, Sum P(3) = 4.9e-24
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 211 LIGQSSTKNKGXXXXXXXXXXXXXXXVDALGEDSSIELGTDHRAKLEIKXXXXXXXXXXX 270
L+GQ++ KNKG DALGED+S E+G ++R K+E +
Sbjct: 347 LVGQTTAKNKGKISRMLAAKTALTIRYDALGEDTSAEMGAENRLKVETRLRHLEERGIRR 406
Query: 271 XSGTTKAKAKLEKYHGK 287
SGT KA A+ +KY K
Sbjct: 407 ISGTGKALARADKYQNK 423
Score = 37 (18.1 bits), Expect = 4.9e-24, Sum P(3) = 4.9e-24
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 281 LEKYHGKRLEKKKFKTEFDAAEETPAT 307
++K K+ +KK+ + E + EE P +
Sbjct: 479 VKKKKKKKEKKKQAEEEEELTEEVPTS 505
>FB|FBgn0026196 [details] [associations]
symbol:nop5 "nop5" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01798 GO:GO:0005730 EMBL:AE014134 GO:GO:0006364
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 KO:K14565 OMA:DAHEQLA
GeneTree:ENSGT00550000074998 FlyBase:FBgn0026196 EMBL:AY061401
EMBL:FM245448 EMBL:FM245453 RefSeq:NP_477412.1 UniGene:Dm.3320
SMR:Q9VM69 IntAct:Q9VM69 MINT:MINT-335173 STRING:Q9VM69
EnsemblMetazoa:FBtr0079369 GeneID:33966 KEGG:dme:Dmel_CG10206
UCSC:CG10206-RA CTD:33966 InParanoid:Q9VM69 GenomeRNAi:33966
NextBio:786179 Uniprot:Q9VM69
Length = 511
Score = 692 (248.7 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
Identities = 134/194 (69%), Positives = 156/194 (80%)
Query: 457 TIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELG 516
T +GLAHSLSRYKLKFSPDK+DTMIVQA LLDDLDKELNNYMMR REWYGWHFPELG
Sbjct: 137 TAMALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLDKELNNYMMRAREWYGWHFPELG 196
Query: 517 KIVTDNLKRNDN----STRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENIL 572
KI+TDN+ TRD + SDLS+ILPED ISMGTEIS++D+ NI
Sbjct: 197 KIITDNIAFVKTIKLVGTRDNMATSDLSDILPEDVEEKVKEAAEISMGTEISEEDVLNIQ 256
Query: 573 LLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPAST 632
LCD+++ I+ YR LYDYLK+RMMA+APNLT+L+G+ VGARL+A AGSL+NLAKHP+ST
Sbjct: 257 CLCDEIISINDYRTHLYDYLKARMMAMAPNLTVLVGDTVGARLIAHAGSLINLAKHPSST 316
Query: 633 VQILGAEKALFRSL 646
VQILGAEKALFR+L
Sbjct: 317 VQILGAEKALFRAL 330
Score = 369 (135.0 bits), Expect = 1.7e-79, Sum P(3) = 1.7e-79
Identities = 73/121 (60%), Positives = 91/121 (75%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GLAHSLSRYKLKFSPDK+DTMIVQA LLDDLDKELNNYMMR REWYGWHFPELGKI+T
Sbjct: 141 LGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLDKELNNYMMRAREWYGWHFPELGKIIT 200
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLK-FSPDKVDTMIVQA--VSLLDDLDKE-LNNYMMRCR 505
DN+AFVKTIK +G +++ L P+ V+ + +A +S+ ++ +E + N C
Sbjct: 201 DNIAFVKTIKLVGTRDNMATSDLSDILPEDVEEKVKEAAEISMGTEISEEDVLNIQCLCD 260
Query: 506 E 506
E
Sbjct: 261 E 261
Score = 256 (95.2 bits), Expect = 1.7e-79, Sum P(3) = 1.7e-79
Identities = 59/88 (67%), Positives = 68/88 (77%)
Query: 613 ARLVAQAGSLLNLAKHPASTVQILGAEK-ALFRSLLNLAKHPASTVQILGAEKALFRALK 671
AR++A A +L L TV GA A SL+NLAKHP+STVQILGAEKALFRALK
Sbjct: 278 ARMMAMAPNLTVLV---GDTV---GARLIAHAGSLINLAKHPSSTVQILGAEKALFRALK 331
Query: 672 TKRDTPKYGLIYHSQLIGQSSTKNKGKM 699
TK+DTPKYGLIYH+QL+GQ+S KNKGKM
Sbjct: 332 TKKDTPKYGLIYHAQLVGQASQKNKGKM 359
Score = 243 (90.6 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
Identities = 49/94 (52%), Positives = 57/94 (60%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
M VL+ETPAGYA FKLLDEKKL++ DNLY+ F+TP+ ANK+LKLKHFEKF D
Sbjct: 1 MFVLYETPAGYAIFKLLDEKKLEQVDNLYQEFETPEKANKLLKLKHFEKFNDTTEALAAA 60
Query: 61 XXXVEGXXXXXXXXXXXXXXXXXXQENLLVADTK 94
VEG Q +LLVAD K
Sbjct: 61 TAAVEGKVAKPLKKTLKKLLVDDVQSSLLVADAK 94
Score = 155 (59.6 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 36/90 (40%), Positives = 45/90 (50%)
Query: 210 QLIGQSSTKNKGXXXXXXXXXXXXXXXVDALGEDSSIELGTDHRAKLEIKXXXXXXXXXX 269
QL+GQ+S KNKG VDA GE+++ ELG H+ KLE +
Sbjct: 346 QLVGQASQKNKGKMSRSLAAKASLATRVDAFGEEATFELGAAHKVKLESRLRLLEEGNLR 405
Query: 270 XXSGTTKAKAKLEKYHGKRLEKKKFKTEFD 299
SGT KAKAK EKY K E ++ E D
Sbjct: 406 KLSGTGKAKAKFEKYQAKS-EVFTYQPEAD 434
Score = 44 (20.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 276 KAKAKLEKYHGKRLEKKKFKTEFDAAEETPATPD 309
+A+ K EK K+ +KKK K E A E A P+
Sbjct: 463 EAEVKSEK---KKKKKKKQKDEEVEAVEEAAAPE 493
>UNIPROTKB|F1N218 [details] [associations]
symbol:NOP58 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=IEA]
Pfam:PF01798 GO:GO:0005737 GO:GO:0030515 GO:GO:0015030
GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
KO:K14565 CTD:51602 OMA:DAHEQLA GeneTree:ENSGT00550000074998
EMBL:DAAA02005606 EMBL:DAAA02005607 IPI:IPI00711083
RefSeq:NP_001179886.1 UniGene:Bt.45900 PRIDE:F1N218
Ensembl:ENSBTAT00000007254 GeneID:507155 KEGG:bta:507155
NextBio:20867927 Uniprot:F1N218
Length = 529
Score = 679 (244.1 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
Identities = 133/194 (68%), Positives = 158/194 (81%)
Query: 457 TIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELG 516
T +GLAHSLSRY+LKFS DKVDTMIVQA+SLLDDLDKELNNY+MRCREWYGWHFPELG
Sbjct: 136 TAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELG 195
Query: 517 KIVTDNLKR----NDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENIL 572
KI++DNL R +++ LSE+LPE+ ISMGTE+S++DI NIL
Sbjct: 196 KIISDNLTYCKCLQKVGDRKNYASAQLSELLPEEVEAEVKAAAEISMGTEVSEEDICNIL 255
Query: 573 LLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPAST 632
LC QV+EIS YR QLY+YL++RMMA+APN+T+++GELVGARL+A AGSLLNLAKH AST
Sbjct: 256 HLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAAST 315
Query: 633 VQILGAEKALFRSL 646
VQILGAEKALFR+L
Sbjct: 316 VQILGAEKALFRAL 329
Score = 339 (124.4 bits), Expect = 8.9e-67, Sum P(3) = 8.9e-67
Identities = 65/121 (53%), Positives = 92/121 (76%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GLAHSLSRY+LKFS DKVDTMIVQA+SLLDDLDKELNNY+MRCREWYGWHFPELGKI++
Sbjct: 140 LGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIIS 199
Query: 450 DNVAFVKTIKTIGLAHSLSRYKL-KFSPDKVDTMIVQA--VSLLDDLDKE-LNNYMMRCR 505
DN+ + K ++ +G + + +L + P++V+ + A +S+ ++ +E + N + C
Sbjct: 200 DNLTYCKCLQKVGDRKNYASAQLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCT 259
Query: 506 E 506
+
Sbjct: 260 Q 260
Score = 234 (87.4 bits), Expect = 8.9e-67, Sum P(3) = 8.9e-67
Identities = 48/67 (71%), Positives = 58/67 (86%)
Query: 634 QILGAEK-ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSS 692
+++GA A SLLNLAKH ASTVQILGAEKALFRALK++RDTPKYGLIYH+ L+GQ+S
Sbjct: 292 ELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTS 351
Query: 693 TKNKGKM 699
K+KGK+
Sbjct: 352 PKHKGKI 358
Score = 203 (76.5 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
Identities = 38/66 (57%), Positives = 48/66 (72%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
MLVLFET GYA FK+L+EKKLQE D+L++ F+TP+ ANK++KLKHFEKF D
Sbjct: 1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAF 60
Query: 61 XXXVEG 66
+EG
Sbjct: 61 TALMEG 66
Score = 135 (52.6 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 35/94 (37%), Positives = 44/94 (46%)
Query: 211 LIGQSSTKNKGXXXXXXXXXXXXXXXVDALGEDSSIELGTDHRAKLEIKXXXXXXXXXXX 270
L+GQ+S K+KG DA GEDSS +G ++RAKLE +
Sbjct: 346 LVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRK 405
Query: 271 XSGTTKAKAKLEKYHGKRLEKKKFKTEFDAAEET 304
SGT KA AK EKY K E K + D+ T
Sbjct: 406 ISGTGKALAKAEKYEHKS-EVKTYDPSGDSTLPT 438
Score = 41 (19.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 287 KRLEKKKFKTEFDAAEETPATPDTSSS 313
K+ +KKK E +EE P T +S
Sbjct: 488 KKKDKKKHVKEEPLSEEEPCTSTAVAS 514
>UNIPROTKB|I3LDD2 [details] [associations]
symbol:NOP58 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=IEA]
Pfam:PF01798 GO:GO:0005737 GO:GO:0030515 GO:GO:0015030
GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
OMA:DAHEQLA GeneTree:ENSGT00550000074998 EMBL:CU466450
Ensembl:ENSSSCT00000029321 Uniprot:I3LDD2
Length = 416
Score = 676 (243.0 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 132/190 (69%), Positives = 157/190 (82%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GLAHSLSRY+LKFS DKVDTMIVQA+SLLDDLDKELNNY+MRCREWYGWHFPELGKI++
Sbjct: 140 LGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIIS 199
Query: 521 DNLKR----NDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCD 576
DNL R +++ LSE+LPE+ ISMGTE+S++DI NIL LC
Sbjct: 200 DNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCT 259
Query: 577 QVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQIL 636
QV+EIS YR QLY+YL++RMMA+APN+T+++GELVGARL+A AGSLLNLAKH ASTVQIL
Sbjct: 260 QVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQIL 319
Query: 637 GAEKALFRSL 646
GAEKALFR+L
Sbjct: 320 GAEKALFRAL 329
Score = 343 (125.8 bits), Expect = 8.2e-73, Sum P(3) = 8.2e-73
Identities = 66/121 (54%), Positives = 92/121 (76%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GLAHSLSRY+LKFS DKVDTMIVQA+SLLDDLDKELNNY+MRCREWYGWHFPELGKI++
Sbjct: 140 LGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIIS 199
Query: 450 DNVAFVKTIKTIGLAHSLSRYKL-KFSPDKVDTMIVQA--VSLLDDLDKE-LNNYMMRCR 505
DN+ + K ++ +G + + KL + P++V+ + A +S+ ++ +E + N + C
Sbjct: 200 DNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCT 259
Query: 506 E 506
+
Sbjct: 260 Q 260
Score = 234 (87.4 bits), Expect = 8.2e-73, Sum P(3) = 8.2e-73
Identities = 48/67 (71%), Positives = 58/67 (86%)
Query: 634 QILGAEK-ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSS 692
+++GA A SLLNLAKH ASTVQILGAEKALFRALK++RDTPKYGLIYH+ L+GQ+S
Sbjct: 292 ELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTS 351
Query: 693 TKNKGKM 699
K+KGK+
Sbjct: 352 PKHKGKI 358
Score = 204 (76.9 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 39/66 (59%), Positives = 48/66 (72%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
MLVLFET GYA FK+L+EKKLQE D+L++ F+TP+ ANKV+KLKHFEKF D
Sbjct: 1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKVVKLKHFEKFQDTAEALAAF 60
Query: 61 XXXVEG 66
+EG
Sbjct: 61 TALMEG 66
Score = 95 (38.5 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 211 LIGQSSTKNKGXXXXXXXXXXXXXXXVDALGEDSSIELGTDHRAKLEIK 259
L+GQ+S K+KG DA GEDSS +G ++RAKLE +
Sbjct: 346 LVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEAR 394
>UNIPROTKB|Q9Y2X3 [details] [associations]
symbol:NOP58 "Nucleolar protein 58" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IDA;TAS] [GO:0016049
"cell growth" evidence=TAS] [GO:0006364 "rRNA processing"
evidence=TAS] [GO:0006608 "snRNP protein import into nucleus"
evidence=ISS] [GO:0030515 "snoRNA binding" evidence=IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=IDA] [GO:0031428 "box C/D snoRNP complex" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070761 "pre-snoRNP
complex" evidence=IDA] [GO:0015030 "Cajal body" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Pfam:PF01798 GO:GO:0005737 GO:GO:0016049
GO:GO:0030515 GO:GO:0015030 GO:GO:0070761 GO:GO:0006364
EMBL:AC064836 GO:GO:0031428 eggNOG:COG1498 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310
EMBL:AF123534 EMBL:AF263608 EMBL:BC032592 EMBL:BC009306
EMBL:AL117554 EMBL:AF161469 IPI:IPI00006379 PIR:T17299
RefSeq:NP_057018.1 UniGene:Hs.471104 ProteinModelPortal:Q9Y2X3
SMR:Q9Y2X3 IntAct:Q9Y2X3 STRING:Q9Y2X3 PhosphoSite:Q9Y2X3
DMDM:17380155 SWISS-2DPAGE:Q9Y2X3 PaxDb:Q9Y2X3 PeptideAtlas:Q9Y2X3
PRIDE:Q9Y2X3 DNASU:51602 Ensembl:ENST00000264279 GeneID:51602
KEGG:hsa:51602 UCSC:uc002uzb.3 CTD:51602 GeneCards:GC02P203130
HGNC:HGNC:29926 HPA:HPA018472 HPA:HPA021062 neXtProt:NX_Q9Y2X3
PharmGKB:PA164724092 InParanoid:Q9Y2X3 OMA:DAHEQLA
OrthoDB:EOG451DQQ PhylomeDB:Q9Y2X3 ChiTaRS:NOP58 GenomeRNAi:51602
NextBio:55479 ArrayExpress:Q9Y2X3 Bgee:Q9Y2X3 Genevestigator:Q9Y2X3
GermOnline:ENSG00000055044 GO:GO:0006608 Uniprot:Q9Y2X3
Length = 529
Score = 676 (243.0 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 132/190 (69%), Positives = 157/190 (82%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GLAHSLSRY+LKFS DKVDTMIVQA+SLLDDLDKELNNY+MRCREWYGWHFPELGKI++
Sbjct: 140 LGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIIS 199
Query: 521 DNLKR----NDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCD 576
DNL R +++ LSE+LPE+ ISMGTE+S++DI NIL LC
Sbjct: 200 DNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCT 259
Query: 577 QVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQIL 636
QV+EIS YR QLY+YL++RMMA+APN+T+++GELVGARL+A AGSLLNLAKH ASTVQIL
Sbjct: 260 QVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQIL 319
Query: 637 GAEKALFRSL 646
GAEKALFR+L
Sbjct: 320 GAEKALFRAL 329
Score = 343 (125.8 bits), Expect = 2.4e-67, Sum P(3) = 2.4e-67
Identities = 66/121 (54%), Positives = 92/121 (76%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GLAHSLSRY+LKFS DKVDTMIVQA+SLLDDLDKELNNY+MRCREWYGWHFPELGKI++
Sbjct: 140 LGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIIS 199
Query: 450 DNVAFVKTIKTIGLAHSLSRYKL-KFSPDKVDTMIVQA--VSLLDDLDKE-LNNYMMRCR 505
DN+ + K ++ +G + + KL + P++V+ + A +S+ ++ +E + N + C
Sbjct: 200 DNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCT 259
Query: 506 E 506
+
Sbjct: 260 Q 260
Score = 234 (87.4 bits), Expect = 2.4e-67, Sum P(3) = 2.4e-67
Identities = 48/67 (71%), Positives = 58/67 (86%)
Query: 634 QILGAEK-ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSS 692
+++GA A SLLNLAKH ASTVQILGAEKALFRALK++RDTPKYGLIYH+ L+GQ+S
Sbjct: 292 ELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTS 351
Query: 693 TKNKGKM 699
K+KGK+
Sbjct: 352 PKHKGKI 358
Score = 203 (76.5 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 38/66 (57%), Positives = 48/66 (72%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
MLVLFET GYA FK+L+EKKLQE D+L++ F+TP+ ANK++KLKHFEKF D
Sbjct: 1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAF 60
Query: 61 XXXVEG 66
+EG
Sbjct: 61 TALMEG 66
Score = 135 (52.6 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 35/94 (37%), Positives = 44/94 (46%)
Query: 211 LIGQSSTKNKGXXXXXXXXXXXXXXXVDALGEDSSIELGTDHRAKLEIKXXXXXXXXXXX 270
L+GQ+S K+KG DA GEDSS +G ++RAKLE +
Sbjct: 346 LVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRK 405
Query: 271 XSGTTKAKAKLEKYHGKRLEKKKFKTEFDAAEET 304
SGT KA AK EKY K E K + D+ T
Sbjct: 406 ISGTGKALAKTEKYEHKS-EVKTYDPSGDSTLPT 438
Score = 40 (19.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 18/77 (23%), Positives = 31/77 (40%)
Query: 237 VDALGEDSSIELGTDHRAKLEIKXXXXXXXXXXXXSGTTKAKAKLEKYHGKRLEKKKFKT 296
++ + ++ I +AK+++K T+ K K KR +KK K
Sbjct: 445 IEQVDKEDEITEKKAKKAKIKVKVEEEEEEKVAEEEETSVKKKK------KRGKKKHIKE 498
Query: 297 EFDAAEETPATPDTSSS 313
E +EE P T +S
Sbjct: 499 E-PLSEEEPCTSTAIAS 514
>MGI|MGI:1933184 [details] [associations]
symbol:Nop58 "NOP58 ribonucleoprotein" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO;IC] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0006608 "snRNP protein
import into nucleus" evidence=ISO] [GO:0015030 "Cajal body"
evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0030519 "snoRNP binding" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0070761 "pre-snoRNP complex"
evidence=ISO] MGI:MGI:1933184 Pfam:PF01798 GO:GO:0005737
GO:GO:0005730 GO:GO:0030515 GO:GO:0042254 GO:GO:0015030
GO:GO:0030519 GO:GO:0070761 GO:GO:0005732 eggNOG:COG1498
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K14565
HOGENOM:HOG000196310 CTD:51602 OMA:DAHEQLA OrthoDB:EOG451DQQ
ChiTaRS:NOP58 GO:GO:0006608 EMBL:AF053232 EMBL:AK044216
EMBL:AK133959 EMBL:AK134286 EMBL:BC076604 EMBL:BC085135
IPI:IPI00463468 RefSeq:NP_061356.2 UniGene:Mm.220367
ProteinModelPortal:Q6DFW4 SMR:Q6DFW4 IntAct:Q6DFW4 STRING:Q6DFW4
PhosphoSite:Q6DFW4 PaxDb:Q6DFW4 PRIDE:Q6DFW4
Ensembl:ENSMUST00000027174 GeneID:55989 KEGG:mmu:55989
UCSC:uc007bdy.1 GeneTree:ENSGT00550000074998 InParanoid:Q6DFW4
NextBio:311710 Bgee:Q6DFW4 CleanEx:MM_NOL5 Genevestigator:Q6DFW4
Uniprot:Q6DFW4
Length = 536
Score = 668 (240.2 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 133/191 (69%), Positives = 157/191 (82%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GLAHSLSRY+LKFS DKVDTMIVQA+SLLDDLDKELNNY+MRCREWYGWHFPELGKI++
Sbjct: 140 LGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIIS 199
Query: 521 DNLK-----RNDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLC 575
DNL + ++ SAS LSE L E+ ISMGTE+S++DI NIL LC
Sbjct: 200 DNLTYCKCLQKVGDRKNYASAS-LSEFLSEEVEAEVKAAAEISMGTEVSEEDICNILHLC 258
Query: 576 DQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQI 635
QV+EIS YR QLY+YL++RMMA+APN+T+++GELVGARL+A AGSLLNLAKH ASTVQI
Sbjct: 259 TQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQI 318
Query: 636 LGAEKALFRSL 646
LGAEKALFR+L
Sbjct: 319 LGAEKALFRAL 329
Score = 336 (123.3 bits), Expect = 1.5e-66, Sum P(3) = 1.5e-66
Identities = 65/121 (53%), Positives = 91/121 (75%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GLAHSLSRY+LKFS DKVDTMIVQA+SLLDDLDKELNNY+MRCREWYGWHFPELGKI++
Sbjct: 140 LGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIIS 199
Query: 450 DNVAFVKTIKTIGLAHSLSRYKL-KFSPDKVDTMIVQA--VSLLDDLDKE-LNNYMMRCR 505
DN+ + K ++ +G + + L +F ++V+ + A +S+ ++ +E + N + C
Sbjct: 200 DNLTYCKCLQKVGDRKNYASASLSEFLSEEVEAEVKAAAEISMGTEVSEEDICNILHLCT 259
Query: 506 E 506
+
Sbjct: 260 Q 260
Score = 237 (88.5 bits), Expect = 1.5e-66, Sum P(3) = 1.5e-66
Identities = 49/67 (73%), Positives = 58/67 (86%)
Query: 634 QILGAEK-ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSS 692
+++GA A SLLNLAKH ASTVQILGAEKALFRALK++RDTPKYGLIYH+ L+GQSS
Sbjct: 292 ELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQSS 351
Query: 693 TKNKGKM 699
K+KGK+
Sbjct: 352 PKHKGKI 358
Score = 203 (76.5 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 38/66 (57%), Positives = 48/66 (72%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
MLVLFET GYA FK+L+EKKLQE D+L++ F+TP+ ANK++KLKHFEKF D
Sbjct: 1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAF 60
Query: 61 XXXVEG 66
+EG
Sbjct: 61 TALMEG 66
Score = 136 (52.9 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 36/94 (38%), Positives = 44/94 (46%)
Query: 211 LIGQSSTKNKGXXXXXXXXXXXXXXXVDALGEDSSIELGTDHRAKLEIKXXXXXXXXXXX 270
L+GQSS K+KG DA GEDSS +G ++RAKLE +
Sbjct: 346 LVGQSSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGIENRAKLEARLRILEDRGIRK 405
Query: 271 XSGTTKAKAKLEKYHGKRLEKKKFKTEFDAAEET 304
SGT KA AK EKY K E K + D+ T
Sbjct: 406 ISGTGKALAKAEKYEHKS-EVKTYDPSGDSTLPT 438
Score = 39 (18.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 287 KRLEKKKFKTEFDAAEETPAT 307
K+ +KKK E +EE P T
Sbjct: 495 KKKDKKKHIKEEPLSEEEPCT 515
>RGD|620484 [details] [associations]
symbol:Nop58 "NOP58 ribonucleoprotein" species:10116 "Rattus
norvegicus" [GO:0000154 "rRNA modification" evidence=NAS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006608 "snRNP protein import into nucleus"
evidence=IDA] [GO:0008649 "rRNA methyltransferase activity"
evidence=NAS] [GO:0015030 "Cajal body" evidence=IEA;ISO]
[GO:0030515 "snoRNA binding" evidence=IEA;ISO] [GO:0030519 "snoRNP
binding" evidence=TAS] [GO:0031167 "rRNA methylation" evidence=NAS]
[GO:0051082 "unfolded protein binding" evidence=TAS] [GO:0070761
"pre-snoRNP complex" evidence=IEA;ISO] EMBL:AF194371 Pfam:PF01798
RGD:620484 GO:GO:0005737 GO:GO:0005730 GO:GO:0051082 GO:GO:0030515
GO:GO:0015030 GO:GO:0030519 GO:GO:0070761 GO:GO:0005732
GO:GO:0008649 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310 CTD:51602
GO:GO:0006608 GeneTree:ENSGT00550000074998 EMBL:AF069782
IPI:IPI00214536 RefSeq:NP_068522.1 UniGene:Rn.43930
ProteinModelPortal:Q9QZ86 STRING:Q9QZ86 PhosphoSite:Q9QZ86
PRIDE:Q9QZ86 Ensembl:ENSRNOT00000022676 GeneID:60373 KEGG:rno:60373
UCSC:RGD:620484 InParanoid:Q9QZ86 NextBio:612047
ArrayExpress:Q9QZ86 Genevestigator:Q9QZ86
GermOnline:ENSRNOG00000016486 Uniprot:Q9QZ86
Length = 534
Score = 666 (239.5 bits), Expect = 6.4e-85, Sum P(2) = 6.4e-85
Identities = 131/190 (68%), Positives = 155/190 (81%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GLAHSLSRY+LKFS DKVDTMIVQA+SLLDDLDKELNNY+MRCREWYGWHFPELGKI++
Sbjct: 140 LGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIIS 199
Query: 521 DNLKR----NDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCD 576
DNL R +++ LSE L E+ ISMGTE+S++DI NIL LC
Sbjct: 200 DNLTYCKCLQKVGDRKNYASATLSEFLSEEVEAEVKAAAEISMGTEVSEEDICNILHLCT 259
Query: 577 QVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQIL 636
QV+EIS YR QLY+YL++RMMA+APN+T+++GELVGARL+A AGSLLNLAKH ASTVQIL
Sbjct: 260 QVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQIL 319
Query: 637 GAEKALFRSL 646
GAEKALFR+L
Sbjct: 320 GAEKALFRAL 329
Score = 335 (123.0 bits), Expect = 4.0e-66, Sum P(3) = 4.0e-66
Identities = 65/121 (53%), Positives = 91/121 (75%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GLAHSLSRY+LKFS DKVDTMIVQA+SLLDDLDKELNNY+MRCREWYGWHFPELGKI++
Sbjct: 140 LGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIIS 199
Query: 450 DNVAFVKTIKTIGLAHSLSRYKL-KFSPDKVDTMIVQA--VSLLDDLDKE-LNNYMMRCR 505
DN+ + K ++ +G + + L +F ++V+ + A +S+ ++ +E + N + C
Sbjct: 200 DNLTYCKCLQKVGDRKNYASATLSEFLSEEVEAEVKAAAEISMGTEVSEEDICNILHLCT 259
Query: 506 E 506
+
Sbjct: 260 Q 260
Score = 234 (87.4 bits), Expect = 4.0e-66, Sum P(3) = 4.0e-66
Identities = 48/67 (71%), Positives = 58/67 (86%)
Query: 634 QILGAEK-ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSS 692
+++GA A SLLNLAKH ASTVQILGAEKALFRALK++RDTPKYGLIYH+ L+GQ+S
Sbjct: 292 ELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTS 351
Query: 693 TKNKGKM 699
K+KGK+
Sbjct: 352 PKHKGKI 358
Score = 203 (76.5 bits), Expect = 6.4e-85, Sum P(2) = 6.4e-85
Identities = 38/66 (57%), Positives = 48/66 (72%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
MLVLFET GYA FK+L+EKKLQE D+L++ F+TP+ ANK++KLKHFEKF D
Sbjct: 1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAF 60
Query: 61 XXXVEG 66
+EG
Sbjct: 61 TALMEG 66
Score = 134 (52.2 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 35/94 (37%), Positives = 44/94 (46%)
Query: 211 LIGQSSTKNKGXXXXXXXXXXXXXXXVDALGEDSSIELGTDHRAKLEIKXXXXXXXXXXX 270
L+GQ+S K+KG DA GEDSS +G ++RAKLE +
Sbjct: 346 LVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGAENRAKLEARLRILEDRGIRK 405
Query: 271 XSGTTKAKAKLEKYHGKRLEKKKFKTEFDAAEET 304
SGT KA AK EKY K E K + D+ T
Sbjct: 406 ISGTGKALAKAEKYEHKS-EVKTYDPSGDSTLPT 438
Score = 44 (20.5 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 15/71 (21%), Positives = 30/71 (42%)
Query: 237 VDALGEDSSIELGTDHRAKLEIKXXXXXXXXXXXXSGTTKAKAKLEKYHGKRLEKKKFKT 296
++ + ++ I +AK++IK + + ++K K+ +KKK
Sbjct: 445 IEEVDKEDEITEKKAKKAKIKIKAEVEEEMEEAEEEQVVEEEPTVKKK--KKKDKKKHIK 502
Query: 297 EFDAAEETPAT 307
E +EE P T
Sbjct: 503 EEPLSEEEPCT 513
>POMBASE|SPAC23G3.06 [details] [associations]
symbol:SPAC23G3.06 "U3 snoRNP protein Nop58 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0030515 "snoRNA binding"
evidence=ISM] [GO:0032040 "small-subunit processome" evidence=ISO]
PomBase:SPAC23G3.06 Pfam:PF01798 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0030515 GO:GO:0006364 GO:GO:0032040
eggNOG:COG1498 HOGENOM:HOG000196309 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 KO:K14565 OrthoDB:EOG4BZRB2
PIR:T50180 RefSeq:NP_593106.1 ProteinModelPortal:Q9P7S7
IntAct:Q9P7S7 STRING:Q9P7S7 EnsemblFungi:SPAC23G3.06.1
GeneID:2541814 KEGG:spo:SPAC23G3.06 OMA:SHILARY NextBio:20802902
Uniprot:Q9P7S7
Length = 508
Score = 655 (235.6 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 126/191 (65%), Positives = 155/191 (81%)
Query: 460 TIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIV 519
++GL+HSLSR+KLKFSPDKVDTMIVQA++LLDDLDKELN Y MR REWYGWHFPE+GKI+
Sbjct: 140 SLGLSHSLSRHKLKFSPDKVDTMIVQAIALLDDLDKELNTYAMRVREWYGWHFPEMGKII 199
Query: 520 TDNLKR----NDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLC 575
DNL R K S +D S+ILPE+ ISMGTEI+++D++NI++L
Sbjct: 200 QDNLAYARVIKAMGMRTKCSETDFSDILPEEIEATLKSAAEISMGTEITEEDLDNIVMLA 259
Query: 576 DQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQI 635
DQVLE++SYR QL +YL++RM A+APNLT L+GELVGARL+A AGSL+NLAK PAST+QI
Sbjct: 260 DQVLELASYRAQLSEYLRNRMQAIAPNLTALVGELVGARLIAHAGSLMNLAKQPASTIQI 319
Query: 636 LGAEKALFRSL 646
LGAEKALFR+L
Sbjct: 320 LGAEKALFRAL 330
Score = 330 (121.2 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 63/117 (53%), Positives = 87/117 (74%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL+HSLSR+KLKFSPDKVDTMIVQA++LLDDLDKELN Y MR REWYGWHFPE+GKI+
Sbjct: 141 LGLSHSLSRHKLKFSPDKVDTMIVQAIALLDDLDKELNTYAMRVREWYGWHFPEMGKIIQ 200
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLK-FSPDKVDTMIVQA--VSLLDDLDKE-LNNYMM 502
DN+A+ + IK +G+ S P++++ + A +S+ ++ +E L+N +M
Sbjct: 201 DNLAYARVIKAMGMRTKCSETDFSDILPEEIEATLKSAAEISMGTEITEEDLDNIVM 257
Score = 231 (86.4 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
Identities = 46/67 (68%), Positives = 57/67 (85%)
Query: 634 QILGAEK-ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSS 692
+++GA A SL+NLAK PAST+QILGAEKALFRALKTK TPKYGLIYH+ L+GQ++
Sbjct: 293 ELVGARLIAHAGSLMNLAKQPASTIQILGAEKALFRALKTKHSTPKYGLIYHASLVGQAN 352
Query: 693 TKNKGKM 699
+KNKGK+
Sbjct: 353 SKNKGKI 359
Score = 125 (49.1 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 33/94 (35%), Positives = 43/94 (45%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
M +L ET AGYA FK D K L++ D L E ++P+GA+ +LKL+ F KF
Sbjct: 1 MFILTETAAGYAIFKAKD-KLLKKRDALIEDLKSPEGASNLLKLQSFAKFESTVDALDNV 59
Query: 61 XXXVEGXXXXXXXXXXXXXXXXXXQENLLVADTK 94
VEG L+VAD K
Sbjct: 60 SALVEGKVSSKLSSLLEGLSDSKSS-TLVVADPK 92
Score = 64 (27.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 211 LIGQSSTKNKGXXXXXXXXXXXXXXXVDALGEDSSIE--LGTDHRAKLE 257
L+GQ+++KNKG VDAL + + +G ++R ++E
Sbjct: 347 LVGQANSKNKGKIARVLATKAALSLRVDALSDKDTTNGNIGLENRIRVE 395
>TAIR|locus:2096214 [details] [associations]
symbol:AT3G05060 "AT3G05060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] Pfam:PF01798 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0042254
EMBL:AC009177 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310 OMA:DAHEQLA
ProtClustDB:CLSN2684456 EMBL:AF302491 EMBL:AF412080 IPI:IPI00543036
RefSeq:NP_187157.1 UniGene:At.16937 ProteinModelPortal:Q9MAB3
SMR:Q9MAB3 STRING:Q9MAB3 PaxDb:Q9MAB3 PRIDE:Q9MAB3
EnsemblPlants:AT3G05060.1 GeneID:819668 KEGG:ath:AT3G05060
TAIR:At3g05060 InParanoid:Q9MAB3 PhylomeDB:Q9MAB3
Genevestigator:Q9MAB3 Uniprot:Q9MAB3
Length = 533
Score = 612 (220.5 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 121/191 (63%), Positives = 148/191 (77%)
Query: 460 TIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIV 519
++GL+HSL+RYKLKFS DKVDTMI+QA+ LLDDLDKELN Y MR REWYGWHFPEL KI+
Sbjct: 138 SLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKII 197
Query: 520 TDNL--KRNDNSTRDKTSAS--DLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLC 575
+DN+ ++ ++ +A+ D SEIL ++ ISMGTE+SD D+ +I LC
Sbjct: 198 SDNILYAKSVKLMGNRVNAAKLDFSEILADEIEADLKDAAVISMGTEVSDLDLLHIRELC 257
Query: 576 DQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQI 635
DQVL +S YR QLYDYLKSRM +APNLT L+GELVGARL++ GSLLNL+K P STVQI
Sbjct: 258 DQVLSLSEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLSKQPGSTVQI 317
Query: 636 LGAEKALFRSL 646
LGAEKALFR+L
Sbjct: 318 LGAEKALFRAL 328
Score = 312 (114.9 bits), Expect = 3.4e-54, Sum P(3) = 3.4e-54
Identities = 63/117 (53%), Positives = 87/117 (74%)
Query: 386 PLNHVGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELG 445
P++ +GL+HSL+RYKLKFS DKVDTMI+QA+ LLDDLDKELN Y MR REWYGWHFPEL
Sbjct: 136 PMS-LGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELA 194
Query: 446 KIVTDNVAFVKTIKTIGLAHSLSRYKLKFSP---DKVDTMIVQA--VSL---LDDLD 494
KI++DN+ + K++K +G + ++ KL FS D+++ + A +S+ + DLD
Sbjct: 195 KIISDNILYAKSVKLMG--NRVNAAKLDFSEILADEIEADLKDAAVISMGTEVSDLD 249
Score = 213 (80.0 bits), Expect = 3.4e-54, Sum P(3) = 3.4e-54
Identities = 41/55 (74%), Positives = 49/55 (89%)
Query: 645 SLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKM 699
SLLNL+K P STVQILGAEKALFRALKTK TPKYGLI+H+ L+GQ++ K+KGK+
Sbjct: 303 SLLNLSKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASLVGQAAPKHKGKI 357
Score = 140 (54.3 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
+LVL+ET AG+A FK+ DE K+ ++L + F TP A K++KLK FEKF +
Sbjct: 2 VLVLYETAAGFALFKVKDEGKMANVEDLCKEFDTPDSARKMVKLKAFEKFDNTSEALEAV 61
Query: 61 XXXVEG 66
+EG
Sbjct: 62 AKLLEG 67
Score = 110 (43.8 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 211 LIGQSSTKNKGXXXXXXXXXXXXXXXVDALGEDSSIELGTDHRAKLEIKXXXXXXXXXXX 270
L+GQ++ K+KG VDALG+ +G ++RAKLE +
Sbjct: 345 LVGQAAPKHKGKISRSLAAKTVLAIRVDALGDSQDNTMGLENRAKLEARLRNLEGKDLGR 404
Query: 271 XSGTTKAKAKLEKYH 285
SG++K K K+E Y+
Sbjct: 405 LSGSSKGKPKIEVYN 419
Score = 46 (21.3 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 275 TKAKAKLEKYHGKRLEKKKFKTEFDAAEETPA 306
T+A ++ K K+ KKK K E + ETPA
Sbjct: 489 TEAVVEVAKEEKKK-NKKKRKHEEEETTETPA 519
Score = 42 (19.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 273 GTTKAKAKLEKYHGKRLEKKKFKTEFDAAEE 303
G T AK+ E+ K+ +KKK K E + EE
Sbjct: 445 GETSAKS--EEPSKKKDKKKKKKVEEEKPEE 473
>TAIR|locus:2181211 [details] [associations]
symbol:AT5G27120 "AT5G27120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
Pfam:PF01798 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005730 GO:GO:0042254 EMBL:AF007271 eggNOG:COG1498
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K14565
HOGENOM:HOG000196310 OMA:DLRTTPK EMBL:AF302490 EMBL:AY074281
EMBL:AY096684 EMBL:BT002060 IPI:IPI00520435 PIR:T01807
RefSeq:NP_198064.1 UniGene:At.10285 UniGene:At.55031
ProteinModelPortal:O04658 SMR:O04658 STRING:O04658 PaxDb:O04658
PRIDE:O04658 EnsemblPlants:AT5G27120.1 GeneID:832770
KEGG:ath:AT5G27120 TAIR:At5g27120 InParanoid:O04658
PhylomeDB:O04658 ProtClustDB:CLSN2684456 Genevestigator:O04658
Uniprot:O04658
Length = 533
Score = 603 (217.3 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 121/191 (63%), Positives = 146/191 (76%)
Query: 460 TIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIV 519
++GL+HSL+RYKLKFS DKVDTMI+QA+ LLDDLDKELN Y MR REW+GWHFPEL KIV
Sbjct: 137 SLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWFGWHFPELAKIV 196
Query: 520 TDNL--KRNDNSTRDKTSAS--DLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLC 575
DN+ + ++ +A+ D SEIL ++ ISMGTE+SD D+ +I LC
Sbjct: 197 QDNILYAKAVKLMGNRINAAKLDFSEILADEIEAELKEAAVISMGTEVSDLDLLHIRELC 256
Query: 576 DQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQI 635
DQVL ++ YR QLYDYLKSRM +APNLT L+GELVGARL++ GSLLNLAK P STVQI
Sbjct: 257 DQVLSLAEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLAKQPGSTVQI 316
Query: 636 LGAEKALFRSL 646
LGAEKALFR+L
Sbjct: 317 LGAEKALFRAL 327
Score = 310 (114.2 bits), Expect = 1.6e-53, Sum P(3) = 1.6e-53
Identities = 63/117 (53%), Positives = 86/117 (73%)
Query: 386 PLNHVGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELG 445
P++ +GL+HSL+RYKLKFS DKVDTMI+QA+ LLDDLDKELN Y MR REW+GWHFPEL
Sbjct: 135 PMS-LGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWFGWHFPELA 193
Query: 446 KIVTDNVAFVKTIKTIGLAHSLSRYKLKFSP---DKVDTMIVQA--VSL---LDDLD 494
KIV DN+ + K +K +G + ++ KL FS D+++ + +A +S+ + DLD
Sbjct: 194 KIVQDNILYAKAVKLMG--NRINAAKLDFSEILADEIEAELKEAAVISMGTEVSDLD 248
Score = 218 (81.8 bits), Expect = 1.6e-53, Sum P(3) = 1.6e-53
Identities = 42/55 (76%), Positives = 49/55 (89%)
Query: 645 SLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKM 699
SLLNLAK P STVQILGAEKALFRALKTK TPKYGLI+H+ ++GQ++ KNKGK+
Sbjct: 302 SLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASVVGQAAPKNKGKI 356
Score = 131 (51.2 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
ML+LFETP G+A FK+L+E KL ++L F T + A K++KL F+KF +
Sbjct: 1 MLILFETPGGFAIFKVLNEGKLSNVEDLGNEFSTAKLARKMVKLVAFDKFDNTAEALEAV 60
Query: 61 XXXVEG 66
+EG
Sbjct: 61 AKLLEG 66
Score = 104 (41.7 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 30/110 (27%), Positives = 46/110 (41%)
Query: 211 LIGQSSTKNKGXXXXXXXXXXXXXXXVDALGEDSSIELGTDHRAKLEIKXXXXXXXXXXX 270
++GQ++ KNKG DALG+ +G ++R KLE +
Sbjct: 344 VVGQAAPKNKGKISRSLAAKSVLAIRCDALGDSQDNTMGVENRLKLEARLRTLEGKDLGR 403
Query: 271 XSGTTKAKAKLEKYH--------GKRLEKKKFKTEFDAAEETPATPDTSS 312
SG+ K K K+E Y G K + T D+ +TP T D+ +
Sbjct: 404 LSGSAKGKPKIEVYDKDKKKGSGGLITPAKTYNTAADSLLQTP-TVDSEN 452
Score = 47 (21.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 278 KAKLEKYHGKRLEKKKFKTEFDAAEETPA 306
+AK E+ K+ KKK + E + AEE PA
Sbjct: 471 EAKTEEPSKKKSNKKKTEAEPETAEE-PA 498
>DICTYBASE|DDB_G0268098 [details] [associations]
symbol:nop58 "nucleolar protein 58" species:44689
"Dictyostelium discoideum" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0268098 Pfam:PF01798
GenomeReviews:CM000150_GR GO:GO:0005730 EMBL:AAFI02000003
GO:GO:0042254 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 RefSeq:XP_647549.1 ProteinModelPortal:Q55FI4
STRING:Q55FI4 PRIDE:Q55FI4 EnsemblProtists:DDB0305289
GeneID:8616357 KEGG:ddi:DDB_G0268098 KO:K14565 OMA:HTELTEY
Uniprot:Q55FI4
Length = 638
Score = 614 (221.2 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 139/289 (48%), Positives = 190/289 (65%)
Query: 395 SLSRY-KLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRC----REWYGWHFPELGKIVT 449
SLS + K +K++ ++ + S + K+ N + C +E +L +V
Sbjct: 72 SLSNFLKKNVVSEKLNEQLIVSDSKFGNAIKDALNIKVLCDDTTQELIRGIRLQLKSLVN 131
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYG 509
N + + +IGL+HS SRYKLKFSPDKVDTMIVQA+SLLDDL E+N Y MR REWYG
Sbjct: 132 ANEQDLNAM-SIGLSHSYSRYKLKFSPDKVDTMIVQAISLLDDLTTEINIYAMRAREWYG 190
Query: 510 WHFPELGKIVTDNLKRND--NSTRDKTSA--SDLSEILPEDXXXXXXXXXXISMGTEISD 565
WHFPELGK++T++ + + + ++ SA +D ++ILPE+ ISMGTEIS
Sbjct: 191 WHFPELGKLITNHTQYANAIKAMGNRKSAVDTDFTDILPEEVAEEVKEAAQISMGTEISP 250
Query: 566 DDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNL 625
+D+++I LCDQ L I +Y +L +YLKSRM A+APNLTIL+GE+VGARL+ +AGSL+NL
Sbjct: 251 EDLDHIFALCDQFLSIQAYHTELTEYLKSRMEAIAPNLTILVGEIVGARLICRAGSLMNL 310
Query: 626 AKHPASTVQILGAEKALFRSLLNLAKHPASTVQILGAEKALFRA-LKTK 673
AK+PAST+QILGAEKALFR+L KH ++ K + A LK K
Sbjct: 311 AKYPASTIQILGAEKALFRALKT--KHNTPKYGLIYNAKIVGEASLKNK 357
Score = 291 (107.5 bits), Expect = 3.1e-50, Sum P(3) = 3.1e-50
Identities = 51/73 (69%), Positives = 61/73 (83%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL+HS SRYKLKFSPDKVDTMIVQA+SLLDDL E+N Y MR REWYGWHFPELGK++T
Sbjct: 142 IGLSHSYSRYKLKFSPDKVDTMIVQAISLLDDLTTEINIYAMRAREWYGWHFPELGKLIT 201
Query: 450 DNVAFVKTIKTIG 462
++ + IK +G
Sbjct: 202 NHTQYANAIKAMG 214
Score = 230 (86.0 bits), Expect = 3.1e-50, Sum P(3) = 3.1e-50
Identities = 46/68 (67%), Positives = 61/68 (89%)
Query: 634 QILGAEKALFR--SLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQS 691
+I+GA + + R SL+NLAK+PAST+QILGAEKALFRALKTK +TPKYGLIY+++++G++
Sbjct: 294 EIVGA-RLICRAGSLMNLAKYPASTIQILGAEKALFRALKTKHNTPKYGLIYNAKIVGEA 352
Query: 692 STKNKGKM 699
S KNKGKM
Sbjct: 353 SLKNKGKM 360
Score = 118 (46.6 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEAD-NLYESFQTPQGANKVLKLKHFEKF 50
MLVLFET AG+A FK+LDE K++ ++ F+TP+ A+ + LK F KF
Sbjct: 1 MLVLFETSAGFALFKVLDEGKMKSKPVDINNFFETPEKASSFVSLKKFYKF 51
Score = 55 (24.4 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 210 QLIGQSSTKNKGXXXXXXXXXXXXXXXVDALGEDSSIELGTDHRAKLE 257
+++G++S KNKG DAL E S G ++ ++
Sbjct: 347 KIVGEASLKNKGKMSRVLAAKAALSARFDALCEVSDTSYGIAYKGAVD 394
Score = 53 (23.7 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 278 KAKLEKYHGKRLEKKKFKTEFDAAEETPATPD 309
K K E+ K+ EKK+ K + + EETP +
Sbjct: 526 KEKKEEKEDKKEEKKEKKDKKEKTEETPVAKE 557
Score = 45 (20.9 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 278 KAKLEKYHGKRLEKKKFKTEFDAAEETPATP 308
K K EK K +K++ K + D E+T TP
Sbjct: 523 KDKKEKKEEKEDKKEEKKEKKDKKEKTEETP 553
Score = 39 (18.8 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 276 KAKAKLEKYHGKRLEKKKFKTEFDAAEETPATPDTSSS 313
K + K EK K ++KK ++ D E+ SSS
Sbjct: 578 KKEKKEEKEEKKEKKEKKSSSKEDKKEKEEKKEKKSSS 615
Score = 39 (18.8 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 272 SGTTKAKA-KLEKYHGKRLEKKKFKTEFDAAEETPATPDTSSS 313
+ TT+ A K K + EK+ K E ++ ++ ++ D+ SS
Sbjct: 431 TNTTRDVATKSSKESSIKQEKQDVKMEEASSSDSDSSSDSDSS 473
>ASPGD|ASPL0000037939 [details] [associations]
symbol:nop58 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0031428 "box C/D
snoRNP complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
Pfam:PF01798 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0030686
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0031428 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 KO:K14565 RefSeq:XP_660771.1
ProteinModelPortal:Q5B8G3 STRING:Q5B8G3
EnsemblFungi:CADANIAT00009903 GeneID:2873782 KEGG:ani:AN3167.2
HOGENOM:HOG000196310 OMA:LNDNIAY OrthoDB:EOG4BZRB2 Uniprot:Q5B8G3
Length = 586
Score = 600 (216.3 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 118/191 (61%), Positives = 145/191 (75%)
Query: 460 TIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIV 519
++GL+HSL+R+KLKFSPDK+DTMIVQA+ LLDDLDKELNNY MR +EWYGWHFPEL KI+
Sbjct: 142 SLGLSHSLARHKLKFSPDKIDTMIVQAIGLLDDLDKELNNYAMRVKEWYGWHFPELAKIL 201
Query: 520 TDNLKRN----DNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLC 575
DN+ + R +DL+EILPE+ SMGTEIS+DD+ENI L
Sbjct: 202 NDNIAYSRLVLKMGMRSNFENADLAEILPEEIEAAVKAAADRSMGTEISEDDLENIQALA 261
Query: 576 DQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQI 635
+QV+ S YR QL Y+ +RM A+APNLT L+G+LVGARL+A AGSL NL+K PAST+QI
Sbjct: 262 EQVVGFSEYRSQLAGYITARMNAIAPNLTALVGDLVGARLIAHAGSLTNLSKSPASTLQI 321
Query: 636 LGAEKALFRSL 646
LGAEKALFR+L
Sbjct: 322 LGAEKALFRAL 332
Score = 308 (113.5 bits), Expect = 7.9e-52, Sum P(3) = 7.9e-52
Identities = 54/98 (55%), Positives = 75/98 (76%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL+HSL+R+KLKFSPDK+DTMIVQA+ LLDDLDKELNNY MR +EWYGWHFPEL KI+
Sbjct: 143 LGLSHSLARHKLKFSPDKIDTMIVQAIGLLDDLDKELNNYAMRVKEWYGWHFPELAKILN 202
Query: 450 DNVAFVKTIKTIGLAHSLSRYKL-KFSPDKVDTMIVQA 486
DN+A+ + + +G+ + L + P++++ + A
Sbjct: 203 DNIAYSRLVLKMGMRSNFENADLAEILPEEIEAAVKAA 240
Score = 229 (85.7 bits), Expect = 7.9e-52, Sum P(3) = 7.9e-52
Identities = 45/55 (81%), Positives = 50/55 (90%)
Query: 645 SLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKM 699
SL NL+K PAST+QILGAEKALFRALKTK DTPKYGLIYH+ LIGQ++ KNKGKM
Sbjct: 307 SLTNLSKSPASTLQILGAEKALFRALKTKHDTPKYGLIYHASLIGQATGKNKGKM 361
Score = 111 (44.1 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
+ +L ET AGYA K D KKL + D+L T +G + +LKLK F+KF
Sbjct: 3 LFILTETSAGYALLKAKD-KKLLKRDDLATEASTAEGVSNLLKLKSFQKFDSATAALEEV 61
Query: 61 XXXVEG 66
VEG
Sbjct: 62 ASVVEG 67
Score = 79 (32.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 32/108 (29%), Positives = 44/108 (40%)
Query: 211 LIGQSSTKNKGXXXXXXXXXXXXXXXVDALGE-DSSIE------LGTDHRAKLEIKXXXX 263
LIGQ++ KNKG VDAL E D + LGT+ R LE K
Sbjct: 349 LIGQATGKNKGKMARVLAAKASLGLRVDALAEWDDDVTEEDKAALGTEARFNLERKLAAL 408
Query: 264 XXXXXXXXS---GTTKAKAKLEKYHGKRLEKKKFKTEFDAAEETPATP 308
G A A+ K++ E +K+ + DA ++ ATP
Sbjct: 409 EGKPLKPRGVAIGPDGASAQPGKFNIN--EARKYNPDADAVDQDKATP 454
>UNIPROTKB|G4MPA1 [details] [associations]
symbol:MGG_07008 "Nucleolar protein nop-58" species:242507
"Magnaporthe oryzae 70-15" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030515 "snoRNA binding"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
Pfam:PF01798 GO:GO:0005730 GO:GO:0030515 EMBL:CM001231
GO:GO:0030686 GO:GO:0006364 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 GO:GO:0005732 GO:GO:0031428
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 KO:K14565
RefSeq:XP_003709766.1 ProteinModelPortal:G4MPA1
EnsemblFungi:MGG_07008T0 GeneID:2685181 KEGG:mgr:MGG_07008
Uniprot:G4MPA1
Length = 599
Score = 598 (215.6 bits), Expect = 2.0e-67, Sum P(2) = 2.0e-67
Identities = 120/195 (61%), Positives = 148/195 (75%)
Query: 456 KTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPEL 515
KT+ ++GL+HSLSR+KL+FS DKVD MI+QA++LLDDLDKELN Y MR +EWYGWHFPEL
Sbjct: 141 KTM-SLGLSHSLSRHKLRFSADKVDVMIIQAINLLDDLDKELNTYAMRVKEWYGWHFPEL 199
Query: 516 GKIVTDNLKRN----DNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENI 571
GKI+ DNL R + DLSEILPE+ +SMGTEIS++D+ENI
Sbjct: 200 GKILNDNLAYARVILTLGMRSNATKVDLSEILPEEIETAVKAAADLSMGTEISEEDLENI 259
Query: 572 LLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPAS 631
LL +QV+ S YR QL YL +RM A+AP+LT L+G LVGARL+A AGSL+NLAK+P S
Sbjct: 260 TLLAEQVVSYSEYRAQLSSYLDARMRAIAPSLTELVGFLVGARLIAHAGSLMNLAKNPGS 319
Query: 632 TVQILGAEKALFRSL 646
T+QILGAEKALFR+L
Sbjct: 320 TIQILGAEKALFRAL 334
Score = 317 (116.6 bits), Expect = 3.9e-52, Sum P(3) = 3.9e-52
Identities = 56/101 (55%), Positives = 79/101 (78%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL+HSLSR+KL+FS DKVD MI+QA++LLDDLDKELN Y MR +EWYGWHFPELGKI+
Sbjct: 145 LGLSHSLSRHKLRFSADKVDVMIIQAINLLDDLDKELNTYAMRVKEWYGWHFPELGKILN 204
Query: 450 DNVAFVKTIKTIGLAHSLSRYKL-KFSPDKVDTMIVQAVSL 489
DN+A+ + I T+G+ + ++ L + P++++T + A L
Sbjct: 205 DNLAYARVILTLGMRSNATKVDLSEILPEEIETAVKAAADL 245
Score = 228 (85.3 bits), Expect = 3.9e-52, Sum P(3) = 3.9e-52
Identities = 56/106 (52%), Positives = 73/106 (68%)
Query: 602 NLTILMGELVG-ARLVAQAGSLLNL---AKHPASTVQI---LGAEK-ALFRSLLNLAKHP 653
N+T+L ++V + AQ S L+ A P+ T + +GA A SL+NLAK+P
Sbjct: 258 NITLLAEQVVSYSEYRAQLSSYLDARMRAIAPSLTELVGFLVGARLIAHAGSLMNLAKNP 317
Query: 654 ASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKM 699
ST+QILGAEKALFRALKTK TPKYGLIYH+ L+GQ++ KNKGK+
Sbjct: 318 GSTIQILGAEKALFRALKTKHATPKYGLIYHASLVGQATGKNKGKI 363
Score = 105 (42.0 bits), Expect = 2.0e-67, Sum P(2) = 2.0e-67
Identities = 26/66 (39%), Positives = 33/66 (50%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXX 60
+L+L ET AGY FK D KKL AD+L T + N+ LKLK F K+
Sbjct: 3 LLILAETSAGYGLFKARD-KKLLSADDLESRLDTAEKINQELKLKEFVKWDSAAAAVGEI 61
Query: 61 XXXVEG 66
+EG
Sbjct: 62 GALLEG 67
>SGD|S000005837 [details] [associations]
symbol:NOP58 "Protein involved in pre-rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0031428 "box C/D snoRNP
complex" evidence=IDA;IPI] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
SGD:S000005837 Pfam:PF01798 EMBL:BK006948 GO:GO:0030686
GO:GO:0017069 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 EMBL:X90565
GO:GO:0000480 GO:GO:0031428 eggNOG:COG1498 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310
OrthoDB:EOG4BZRB2 GO:GO:0006608 GeneTree:ENSGT00550000074998
EMBL:AF056070 EMBL:Z75217 PIR:S58322 RefSeq:NP_014955.1
ProteinModelPortal:Q12499 SMR:Q12499 DIP:DIP-5843N IntAct:Q12499
MINT:MINT-658431 STRING:Q12499 PaxDb:Q12499 PeptideAtlas:Q12499
PRIDE:Q12499 EnsemblFungi:YOR310C GeneID:854487 KEGG:sce:YOR310C
CYGD:YOR310c OMA:DLRTTPK NextBio:976810 Genevestigator:Q12499
GermOnline:YOR310C Uniprot:Q12499
Length = 511
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 134/266 (50%), Positives = 179/266 (67%)
Query: 392 LAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDK-ELN-NYMMRC--REWYGW---HFPEL 444
++ L + + DK T+IV L + ++K LN N + + Y + PEL
Sbjct: 68 VSSQLEKLLEEIKKDKKSTLIVSETKLANAINKLGLNFNVVSDAVTLDIYRAIKEYLPEL 127
Query: 445 GKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRC 504
++DN + ++GLAHS+ R+KLKFS DKVD MI+QA++LLDDLDKELN Y MRC
Sbjct: 128 LPGMSDNDL---SKMSLGLAHSIGRHKLKFSADKVDVMIIQAIALLDDLDKELNTYAMRC 184
Query: 505 REWYGWHFPELGKIVTDNLKRN----DNSTRDKTSASDLSEILPEDXXXXXXXXXXISMG 560
+EWYGWHFPEL KIVTD++ R K S +DLSEILPE+ +SMG
Sbjct: 185 KEWYGWHFPELAKIVTDSVAYARIILTMGIRSKASETDLSEILPEEIEERVKTAAEVSMG 244
Query: 561 TEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAG 620
TEI+ D++NI L +Q++E ++YR QL +YL +RM A+APNLT L+GELVGARL+A +G
Sbjct: 245 TEITQTDLDNINALAEQIVEFAAYREQLSNYLSARMKAIAPNLTQLVGELVGARLIAHSG 304
Query: 621 SLLNLAKHPASTVQILGAEKALFRSL 646
SL++LAK PAST+QILGAEKALFR+L
Sbjct: 305 SLISLAKSPASTIQILGAEKALFRAL 330
Score = 316 (116.3 bits), Expect = 1.9e-50, Sum P(3) = 1.9e-50
Identities = 61/114 (53%), Positives = 85/114 (74%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GLAHS+ R+KLKFS DKVD MI+QA++LLDDLDKELN Y MRC+EWYGWHFPEL KIVT
Sbjct: 141 LGLAHSIGRHKLKFSADKVDVMIIQAIALLDDLDKELNTYAMRCKEWYGWHFPELAKIVT 200
Query: 450 DNVAFVKTIKTIGLAHSLSRYKL-KFSPDKVDTMIVQA--VSLLDDLDK-ELNN 499
D+VA+ + I T+G+ S L + P++++ + A VS+ ++ + +L+N
Sbjct: 201 DSVAYARIILTMGIRSKASETDLSEILPEEIEERVKTAAEVSMGTEITQTDLDN 254
Score = 227 (85.0 bits), Expect = 1.9e-50, Sum P(3) = 1.9e-50
Identities = 51/94 (54%), Positives = 67/94 (71%)
Query: 607 MGELVGARLVAQAGSLLNLAKHPASTVQILGAEK-ALFRSLLNLAKHPASTVQILGAEKA 665
+ + AR+ A A +L L +++GA A SL++LAK PAST+QILGAEKA
Sbjct: 272 LSNYLSARMKAIAPNLTQLVG------ELVGARLIAHSGSLISLAKSPASTIQILGAEKA 325
Query: 666 LFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKM 699
LFRALKTK DTPKYGL+YH+ L+GQ++ KNKGK+
Sbjct: 326 LFRALKTKHDTPKYGLLYHASLVGQATGKNKGKI 359
Score = 82 (33.9 bits), Expect = 1.9e-50, Sum P(3) = 1.9e-50
Identities = 28/101 (27%), Positives = 40/101 (39%)
Query: 3 VLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFIDXXXXXXXXXX 62
VL ET AGYA K D KK+ ++ +L + + K K+ F KF
Sbjct: 4 VLTETSAGYALLKASD-KKIYKSSSLIQDLDSSDKVLKEFKIAAFSKFNSAANALEEANS 62
Query: 63 XVEGXXXXXXXXXXXXXXXXXXQENLLVADTKRA-AYPSLG 102
+EG + L+V++TK A A LG
Sbjct: 63 IIEGKVSSQLEKLLEEIKKDK-KSTLIVSETKLANAINKLG 102
>GENEDB_PFALCIPARUM|PF10_0085 [details] [associations]
symbol:PF10_0085 "nucleolar protein NOP5,
putative" species:5833 "Plasmodium falciparum" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] Pfam:PF01798
GO:GO:0003723 EMBL:AE014185 GO:GO:0006364 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 KO:K14565 HOGENOM:HOG000196310 OMA:DLRTTPK
HSSP:O28191 RefSeq:XP_001347370.1 ProteinModelPortal:Q8IJV7
PRIDE:Q8IJV7 EnsemblProtists:PF10_0085:mRNA GeneID:810243
KEGG:pfa:PF10_0085 EuPathDB:PlasmoDB:PF3D7_1008800
ProtClustDB:CLSZ2432650 Uniprot:Q8IJV7
Length = 469
Score = 538 (194.4 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 117/219 (53%), Positives = 151/219 (68%)
Query: 440 HFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNN 499
H EL +V N K +K + L+HSL+R+KLKFS DKVD MIVQAV LL+DLDKE+N
Sbjct: 125 HLYEL--LVGVNEEDSKLLK-LSLSHSLNRFKLKFSADKVDVMIVQAVGLLEDLDKEINV 181
Query: 500 YMMRCREWYGWHFPELGKIVTDNLKRNDNST-----RDKTSASDLSEILPEDXXXXXXXX 554
+ MR +EWYGWHFPELGK++TDN K R+ +L E E+
Sbjct: 182 FSMRLKEWYGWHFPELGKVITDN-KIYAKCVKLIGFRNNAKNVNLLEETTEEIQKEIKQL 240
Query: 555 XXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGAR 614
ISMGTEI DDD+ I L D++LE++ YR L YLK RM ++APNLT L+G+LVGA+
Sbjct: 241 AEISMGTEIEDDDLNCINELADRLLELTDYRESLATYLKYRMNSIAPNLTYLVGDLVGAK 300
Query: 615 LVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHP 653
L+A+AGSL++LAKHP+ST+QILG+EKALFR+L +K P
Sbjct: 301 LIAKAGSLMSLAKHPSSTLQILGSEKALFRALKTKSKTP 339
Score = 286 (105.7 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 56/113 (49%), Positives = 80/113 (70%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+ L+HSL+R+KLKFS DKVD MIVQAV LL+DLDKE+N + MR +EWYGWHFPELGK++T
Sbjct: 143 LSLSHSLNRFKLKFSADKVDVMIVQAVGLLEDLDKEINVFSMRLKEWYGWHFPELGKVIT 202
Query: 450 DNVAFVKTIKTIGLAHSLSRYKL-KFSPDKVDTMIVQA--VSLLDDL-DKELN 498
DN + K +K IG ++ L + + +++ I Q +S+ ++ D +LN
Sbjct: 203 DNKIYAKCVKLIGFRNNAKNVNLLEETTEEIQKEIKQLAEISMGTEIEDDDLN 255
Score = 209 (78.6 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 635 ILGAEK-ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSST 693
++GA+ A SL++LAKHP+ST+QILG+EKALFRALKTK TPKYGLIYH+ L+GQ++
Sbjct: 296 LVGAKLIAKAGSLMSLAKHPSSTLQILGSEKALFRALKTKSKTPKYGLIYHATLVGQTAP 355
Query: 694 KNKGKM 699
K KG++
Sbjct: 356 KLKGRI 361
Score = 87 (35.7 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEAD--NLYESFQTPQGANKVLKLKHFEKF 50
ML+L ET AGY FK+ + KL E+D ++ + F T + A K + L F KF
Sbjct: 1 MLILVETAAGYGLFKV-ENSKLIESDVKDIEKCFVTSEEARKNVSLYSFSKF 51
>UNIPROTKB|Q8IJV7 [details] [associations]
symbol:PF10_0085 "Nucleolar protein NOP5, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006364 "rRNA processing" evidence=ISS] Pfam:PF01798
GO:GO:0003723 EMBL:AE014185 GO:GO:0006364 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 KO:K14565 HOGENOM:HOG000196310 OMA:DLRTTPK
HSSP:O28191 RefSeq:XP_001347370.1 ProteinModelPortal:Q8IJV7
PRIDE:Q8IJV7 EnsemblProtists:PF10_0085:mRNA GeneID:810243
KEGG:pfa:PF10_0085 EuPathDB:PlasmoDB:PF3D7_1008800
ProtClustDB:CLSZ2432650 Uniprot:Q8IJV7
Length = 469
Score = 538 (194.4 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 117/219 (53%), Positives = 151/219 (68%)
Query: 440 HFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNN 499
H EL +V N K +K + L+HSL+R+KLKFS DKVD MIVQAV LL+DLDKE+N
Sbjct: 125 HLYEL--LVGVNEEDSKLLK-LSLSHSLNRFKLKFSADKVDVMIVQAVGLLEDLDKEINV 181
Query: 500 YMMRCREWYGWHFPELGKIVTDNLKRNDNST-----RDKTSASDLSEILPEDXXXXXXXX 554
+ MR +EWYGWHFPELGK++TDN K R+ +L E E+
Sbjct: 182 FSMRLKEWYGWHFPELGKVITDN-KIYAKCVKLIGFRNNAKNVNLLEETTEEIQKEIKQL 240
Query: 555 XXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGAR 614
ISMGTEI DDD+ I L D++LE++ YR L YLK RM ++APNLT L+G+LVGA+
Sbjct: 241 AEISMGTEIEDDDLNCINELADRLLELTDYRESLATYLKYRMNSIAPNLTYLVGDLVGAK 300
Query: 615 LVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHP 653
L+A+AGSL++LAKHP+ST+QILG+EKALFR+L +K P
Sbjct: 301 LIAKAGSLMSLAKHPSSTLQILGSEKALFRALKTKSKTP 339
Score = 286 (105.7 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 56/113 (49%), Positives = 80/113 (70%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+ L+HSL+R+KLKFS DKVD MIVQAV LL+DLDKE+N + MR +EWYGWHFPELGK++T
Sbjct: 143 LSLSHSLNRFKLKFSADKVDVMIVQAVGLLEDLDKEINVFSMRLKEWYGWHFPELGKVIT 202
Query: 450 DNVAFVKTIKTIGLAHSLSRYKL-KFSPDKVDTMIVQA--VSLLDDL-DKELN 498
DN + K +K IG ++ L + + +++ I Q +S+ ++ D +LN
Sbjct: 203 DNKIYAKCVKLIGFRNNAKNVNLLEETTEEIQKEIKQLAEISMGTEIEDDDLN 255
Score = 209 (78.6 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 635 ILGAEK-ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSST 693
++GA+ A SL++LAKHP+ST+QILG+EKALFRALKTK TPKYGLIYH+ L+GQ++
Sbjct: 296 LVGAKLIAKAGSLMSLAKHPSSTLQILGSEKALFRALKTKSKTPKYGLIYHATLVGQTAP 355
Query: 694 KNKGKM 699
K KG++
Sbjct: 356 KLKGRI 361
Score = 87 (35.7 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEAD--NLYESFQTPQGANKVLKLKHFEKF 50
ML+L ET AGY FK+ + KL E+D ++ + F T + A K + L F KF
Sbjct: 1 MLILVETAAGYGLFKV-ENSKLIESDVKDIEKCFVTSEEARKNVSLYSFSKF 51
>SGD|S000004187 [details] [associations]
symbol:NOP56 "Nucleolar protein component of the box C/D
snoRNP complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0031428
"box C/D snoRNP complex" evidence=IDA;IPI] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0000154 "rRNA modification"
evidence=TAS] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] SGD:S000004187
Pfam:PF01798 EMBL:BK006945 GO:GO:0030686 GO:GO:0032040 EMBL:U14913
GO:GO:0000154 GO:GO:0031428 eggNOG:COG1498 HOGENOM:HOG000196309
KO:K14564 InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 OMA:QEAPQEN
GeneTree:ENSGT00550000075068 OrthoDB:EOG42FWS6 EMBL:U20237
PIR:S48550 RefSeq:NP_013298.1 ProteinModelPortal:Q12460 SMR:Q12460
DIP:DIP-4405N IntAct:Q12460 MINT:MINT-525679 STRING:Q12460
PaxDb:Q12460 PeptideAtlas:Q12460 EnsemblFungi:YLR197W GeneID:850894
KEGG:sce:YLR197W CYGD:YLR197w NextBio:967272 Genevestigator:Q12460
GermOnline:YLR197W Uniprot:Q12460
Length = 504
Score = 482 (174.7 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 100/202 (49%), Positives = 133/202 (65%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL H+ SR K+KFS K D I+QA++LLD LDK++N + MR +EWYGWHFPEL K+V
Sbjct: 152 LGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVP 211
Query: 521 DN-------LKRNDNSTRDKTSASDLSEILPEDXXXXXXXX--XXISMGTEISDDDIENI 571
DN L D ++ + S DL+ +L ED ISMG +IS+ D+EN+
Sbjct: 212 DNYTFAKLVLFIKDKASLNDDSLHDLAALLNEDSGIAQRVIDNARISMGQDISETDMENV 271
Query: 572 LLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPAS 631
+ +V ++ YR QLYDYL +M VAPNL+ L+GE++GARL++ AGSL NL+K AS
Sbjct: 272 CVFAQRVASLADYRRQLYDYLCEKMHTVAPNLSELIGEVIGARLISHAGSLTNLSKQAAS 331
Query: 632 TVQILGAEKALFRSLLNLAKHP 653
TVQILGAEKALFR+L P
Sbjct: 332 TVQILGAEKALFRALKTKGNTP 353
Score = 227 (85.0 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 39/69 (56%), Positives = 51/69 (73%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL H+ SR K+KFS K D I+QA++LLD LDK++N + MR +EWYGWHFPEL K+V
Sbjct: 152 LGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVP 211
Query: 450 DNVAFVKTI 458
DN F K +
Sbjct: 212 DNYTFAKLV 220
Score = 55 (24.4 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 3 VLFETPAGYAFFKLLDEKKLQEAD 26
+LFE P GYA FK+ KLQ+ D
Sbjct: 7 LLFEEPTGYAVFKV----KLQQDD 26
>CGD|CAL0000142 [details] [associations]
symbol:SIK1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0031428 "box C/D snoRNP complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] CGD:CAL0000142
Pfam:PF01798 EMBL:AACQ01000032 GO:GO:0032040 eggNOG:COG1498
HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 RefSeq:XP_719331.1 ProteinModelPortal:Q5ACS3
STRING:Q5ACS3 GeneID:3638925 KEGG:cal:CaO19.7569 Uniprot:Q5ACS3
Length = 516
Score = 478 (173.3 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 100/202 (49%), Positives = 133/202 (65%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL H+ SR K+KFS K D I+QA++LLD LDK++N + MR +EWYGWHFPEL KIV
Sbjct: 151 LGLGHAFSRAKVKFSVQKNDNHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKIVP 210
Query: 521 DNLK--RNDNSTRDKTSASD-----LSEILPEDXXXXXXXX--XXISMGTEISDDDIENI 571
DN + S +DK S +D ++ IL +D ISMG +IS+ D++N+
Sbjct: 211 DNYSYAKLALSIKDKASLTDDSLHDVAAILNDDSGLAQRVIDNAKISMGQDISEQDMDNV 270
Query: 572 LLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPAS 631
+ +V+ + YR QLY YL +M VAPNL+ L+GE+VGARL++ AGSL NL+K AS
Sbjct: 271 ITFAQRVVNLYEYRQQLYKYLTDKMHTVAPNLSTLIGEVVGARLISHAGSLTNLSKQAAS 330
Query: 632 TVQILGAEKALFRSLLNLAKHP 653
TVQILGAEKALFR+L P
Sbjct: 331 TVQILGAEKALFRALKTKGNTP 352
Score = 227 (85.0 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 40/72 (55%), Positives = 53/72 (73%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL H+ SR K+KFS K D I+QA++LLD LDK++N + MR +EWYGWHFPEL KIV
Sbjct: 151 LGLGHAFSRAKVKFSVQKNDNHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKIVP 210
Query: 450 DNVAFVKTIKTI 461
DN ++ K +I
Sbjct: 211 DNYSYAKLALSI 222
Score = 55 (24.4 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 3 VLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFID 52
+LFE GY FK+L +Q+ D S + + AN + K F K ++
Sbjct: 7 LLFEEATGYGIFKVL----IQQDDIASRSKEVQEAANDLSK---FSKMVE 49
>UNIPROTKB|Q5ACS3 [details] [associations]
symbol:SIK1 "Putative uncharacterized protein SIK1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] CGD:CAL0000142 Pfam:PF01798
EMBL:AACQ01000032 GO:GO:0032040 eggNOG:COG1498 HOGENOM:HOG000196309
KO:K14564 InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 RefSeq:XP_719331.1
ProteinModelPortal:Q5ACS3 STRING:Q5ACS3 GeneID:3638925
KEGG:cal:CaO19.7569 Uniprot:Q5ACS3
Length = 516
Score = 478 (173.3 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 100/202 (49%), Positives = 133/202 (65%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL H+ SR K+KFS K D I+QA++LLD LDK++N + MR +EWYGWHFPEL KIV
Sbjct: 151 LGLGHAFSRAKVKFSVQKNDNHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKIVP 210
Query: 521 DNLK--RNDNSTRDKTSASD-----LSEILPEDXXXXXXXX--XXISMGTEISDDDIENI 571
DN + S +DK S +D ++ IL +D ISMG +IS+ D++N+
Sbjct: 211 DNYSYAKLALSIKDKASLTDDSLHDVAAILNDDSGLAQRVIDNAKISMGQDISEQDMDNV 270
Query: 572 LLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPAS 631
+ +V+ + YR QLY YL +M VAPNL+ L+GE+VGARL++ AGSL NL+K AS
Sbjct: 271 ITFAQRVVNLYEYRQQLYKYLTDKMHTVAPNLSTLIGEVVGARLISHAGSLTNLSKQAAS 330
Query: 632 TVQILGAEKALFRSLLNLAKHP 653
TVQILGAEKALFR+L P
Sbjct: 331 TVQILGAEKALFRALKTKGNTP 352
Score = 227 (85.0 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 40/72 (55%), Positives = 53/72 (73%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL H+ SR K+KFS K D I+QA++LLD LDK++N + MR +EWYGWHFPEL KIV
Sbjct: 151 LGLGHAFSRAKVKFSVQKNDNHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKIVP 210
Query: 450 DNVAFVKTIKTI 461
DN ++ K +I
Sbjct: 211 DNYSYAKLALSI 222
Score = 55 (24.4 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 3 VLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFID 52
+LFE GY FK+L +Q+ D S + + AN + K F K ++
Sbjct: 7 LLFEEATGYGIFKVL----IQQDDIASRSKEVQEAANDLSK---FSKMVE 49
>POMBASE|SPBC646.10c [details] [associations]
symbol:SPBC646.10c "U3 snoRNP protein Nop56 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO;IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISO]
Pfam:PF01798 PomBase:SPBC646.10c GO:GO:0005730 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0030532 GO:GO:0005732
eggNOG:COG1498 HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 PIR:T40586 RefSeq:NP_595368.1
ProteinModelPortal:O94514 IntAct:O94514 STRING:O94514
EnsemblFungi:SPBC646.10c.1 GeneID:2541087 KEGG:spo:SPBC646.10c
OMA:QQLHEYI OrthoDB:EOG42FWS6 NextBio:20802200 Uniprot:O94514
Length = 497
Score = 486 (176.1 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 99/202 (49%), Positives = 137/202 (67%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL HS SR K+KF+ ++ D MI+QA+++LD LDK++N + MR +EWY WHFPEL KIV
Sbjct: 148 LGLGHSYSRAKVKFNVNRNDNMIIQAIAILDQLDKDINTFAMRMKEWYSWHFPELSKIVG 207
Query: 521 DNLKR-------NDNSTRDKTSASDLSEILPEDXXXXXXXXXX--ISMGTEISDDDIENI 571
DN K D +T + DL+ ++ +D +SMG +IS+ D+ENI
Sbjct: 208 DNYKYAVIVTLVGDKTTINDEMLHDLAAVVDDDKDIAQSIINAGKVSMGQDISEIDLENI 267
Query: 572 LLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPAS 631
L ++V+++S+YR QL++YL +M VAPNL L+GE+VGARL++ AGSL NL+K PAS
Sbjct: 268 LSFAERVIKLSNYRKQLHNYLVQKMNVVAPNLAELIGEMVGARLISHAGSLTNLSKCPAS 327
Query: 632 TVQILGAEKALFRSLLNLAKHP 653
TVQILGAEKALFR+L P
Sbjct: 328 TVQILGAEKALFRALKTRGNTP 349
Score = 221 (82.9 bits), Expect = 5.6e-33, Sum P(3) = 5.6e-33
Identities = 37/73 (50%), Positives = 53/73 (72%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL HS SR K+KF+ ++ D MI+QA+++LD LDK++N + MR +EWY WHFPEL KIV
Sbjct: 148 LGLGHSYSRAKVKFNVNRNDNMIIQAIAILDQLDKDINTFAMRMKEWYSWHFPELSKIVG 207
Query: 450 DNVAFVKTIKTIG 462
DN + + +G
Sbjct: 208 DNYKYAVIVTLVG 220
Score = 209 (78.6 bits), Expect = 5.6e-33, Sum P(3) = 5.6e-33
Identities = 40/58 (68%), Positives = 49/58 (84%)
Query: 645 SLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKMGSY 702
SL NL+K PASTVQILGAEKALFRALKT+ +TPKYG+IYHS IG++ KNKG++ +
Sbjct: 317 SLTNLSKCPASTVQILGAEKALFRALKTRGNTPKYGIIYHSSFIGKAGAKNKGRISRF 374
Score = 46 (21.3 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 3 VLFETPAGYAFFKLLDEKKLQ-EADNLYESFQTPQGANKVLKLKHFEKF 50
+L+E+ GY+ F ++ ++ + + S Q KV++L+ F F
Sbjct: 5 LLYESATGYSLFDVVGADQIAAKTKEVQLSLQDISKFGKVVQLRSFIPF 53
>TAIR|locus:2205270 [details] [associations]
symbol:NOP56 "homolog of nucleolar protein NOP56"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] Pfam:PF01798 EMBL:CP002684
GO:GO:0009506 GO:GO:0005618 GO:GO:0005730 UniGene:At.48973
EMBL:AC009894 HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 HSSP:O28191 ProtClustDB:CLSN2682875 EMBL:AF302492
EMBL:AY039541 EMBL:AY102151 EMBL:AY087080 IPI:IPI00548989
PIR:D96602 RefSeq:NP_176007.1 UniGene:At.22033
ProteinModelPortal:Q9SGT7 SMR:Q9SGT7 IntAct:Q9SGT7 STRING:Q9SGT7
PRIDE:Q9SGT7 EnsemblPlants:AT1G56110.1 GeneID:842063
KEGG:ath:AT1G56110 TAIR:At1g56110 InParanoid:Q9SGT7 OMA:GSHITEA
PhylomeDB:Q9SGT7 Genevestigator:Q9SGT7 Uniprot:Q9SGT7
Length = 522
Score = 475 (172.3 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 97/201 (48%), Positives = 136/201 (67%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GLAHS SR K+KF+ ++VD M++QA+ +LD LDK++N++ MR REWY WHFPEL KIV
Sbjct: 149 LGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTLDKDINSFAMRVREWYSWHFPELVKIVN 208
Query: 521 DNL--KRNDNSTRDKTSASD-----LSEIL-PEDXXXXXXXXXXISMGTEISDDDIENIL 572
DN R DK+ ++ L+E+L ED SMG+++S D+ N+
Sbjct: 209 DNYLYARVSKMIDDKSKLTEDHIPMLTEVLGDEDKAKEVIEAGKASMGSDLSPLDLINVQ 268
Query: 573 LLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPAST 632
+V++++ YR +LYDYL ++M +APNL L+GE+VGARL++ AGSL NLAK P+ST
Sbjct: 269 TFAQKVMDLADYRKKLYDYLVTKMSDIAPNLAALIGEMVGARLISHAGSLTNLAKCPSST 328
Query: 633 VQILGAEKALFRSLLNLAKHP 653
+QILGAEKALFR+L P
Sbjct: 329 LQILGAEKALFRALKTRGNTP 349
Score = 232 (86.7 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 40/74 (54%), Positives = 56/74 (75%)
Query: 388 NHVGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKI 447
+ +GLAHS SR K+KF+ ++VD M++QA+ +LD LDK++N++ MR REWY WHFPEL KI
Sbjct: 147 SQLGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTLDKDINSFAMRVREWYSWHFPELVKI 206
Query: 448 VTDNVAFVKTIKTI 461
V DN + + K I
Sbjct: 207 VNDNYLYARVSKMI 220
Score = 48 (22.0 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 1 MLVLFETPAGYAFFKL--LDEKKLQEADNLYESFQTPQGANKVLKLKHFEKF 50
M V++E+ +GY F++ LDE Q + + S +V++L F F
Sbjct: 3 MYVIYESSSGYGLFEVHGLDEIG-QNTEAVRTSVSDLSRFGRVVQLTAFHPF 53
>ASPGD|ASPL0000040023 [details] [associations]
symbol:AN10352 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0031428 "box C/D
snoRNP complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006364 "rRNA processing" evidence=IEA]
Pfam:PF01798 EMBL:BN001306 GO:GO:0030686 GO:GO:0006364
GO:GO:0032040 GO:GO:0031428 HOGENOM:HOG000196309 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 OMA:QEAPQEN EnsemblFungi:CADANIAT00010009
Uniprot:C8VIQ3
Length = 510
Score = 462 (167.7 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 94/202 (46%), Positives = 130/202 (64%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL H+ SR K+KFS + D I+QA+++LD LDK +N + MR REWY WHFPEL KIV+
Sbjct: 152 LGLGHAYSRAKVKFSVQRDDNHIIQAIAILDQLDKAINTFSMRVREWYSWHFPELIKIVS 211
Query: 521 DNLKR-------NDNSTRDKTSASDLSEILPEDXXXXXXXXXXI--SMGTEISDDDIENI 571
DN + D T + D++ ++ +D SMG +IS+ D+EN+
Sbjct: 212 DNQRYAQLALFIKDKKTLTDENLHDIAALVEDDEGVAQSIIDAAKRSMGQDISESDMENV 271
Query: 572 LLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPAS 631
+ +V+ +S YR L+ YL S+M VAPNL L+G++VGARL++ AGSL NL+K+PAS
Sbjct: 272 ISFAQRVVSLSKYRKSLHSYLVSKMNVVAPNLAALIGDIVGARLISHAGSLTNLSKYPAS 331
Query: 632 TVQILGAEKALFRSLLNLAKHP 653
TVQILGAEKALFR+L P
Sbjct: 332 TVQILGAEKALFRALKTKGNTP 353
Score = 206 (77.6 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL H+ SR K+KFS + D I+QA+++LD LDK +N + MR REWY WHFPEL KIV+
Sbjct: 152 LGLGHAYSRAKVKFSVQRDDNHIIQAIAILDQLDKAINTFSMRVREWYSWHFPELIKIVS 211
Query: 450 DN------VAFVKTIKTI 461
DN F+K KT+
Sbjct: 212 DNQRYAQLALFIKDKKTL 229
Score = 48 (22.0 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 3 VLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLK 43
+LFE P GY+ FK+ K NL E +G N + K
Sbjct: 5 LLFEGPMGYSLFKVA-HKGDAVGHNLKE---VQEGVNDLAK 41
>TAIR|locus:2087755 [details] [associations]
symbol:AT3G12860 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0006606 "protein import into
nucleus" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0042991 "transcription factor
import into nucleus" evidence=RCA] Pfam:PF01798 EMBL:CP002686
GO:GO:0003676 GO:GO:0030529 EMBL:AB024033 HOGENOM:HOG000196309
KO:K14564 InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 OMA:QEAPQEN HSSP:O28191
IPI:IPI00527919 RefSeq:NP_187892.2 UniGene:At.53283
ProteinModelPortal:Q9LTV0 SMR:Q9LTV0 STRING:Q9LTV0 PRIDE:Q9LTV0
EnsemblPlants:AT3G12860.1 GeneID:820468 KEGG:ath:AT3G12860
TAIR:At3g12860 InParanoid:Q9LTV0 PhylomeDB:Q9LTV0
ProtClustDB:CLSN2682875 ArrayExpress:Q9LTV0 Genevestigator:Q9LTV0
Uniprot:Q9LTV0
Length = 499
Score = 468 (169.8 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 97/201 (48%), Positives = 134/201 (66%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GLAHS SR K+KF+ ++VD M++QA+ +LD LDK++N++ MR REWY WHFPEL KIV
Sbjct: 149 LGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTLDKDINSFAMRVREWYSWHFPELVKIVN 208
Query: 521 DNL--KRNDNSTRDKTSASD-----LSEIL-PEDXXXXXXXXXXISMGTEISDDDIENIL 572
DN + DK+ S+ L+E L ED SMG ++S D+ N+
Sbjct: 209 DNYLYAKVSKIIVDKSKLSEEHIPMLTEALGDEDKAREVIEAGKASMGQDLSPVDLINVQ 268
Query: 573 LLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPAST 632
+V++++ YR +LYDYL ++M +APNL L+GE+VGARL++ AGSL NLAK P+ST
Sbjct: 269 TFAQRVMDLADYRKKLYDYLVTKMSDIAPNLAALIGEMVGARLISHAGSLTNLAKCPSST 328
Query: 633 VQILGAEKALFRSLLNLAKHP 653
+QILGAEKALFR+L P
Sbjct: 329 LQILGAEKALFRALKTRGNTP 349
Score = 234 (87.4 bits), Expect = 6.7e-34, Sum P(3) = 6.7e-34
Identities = 41/72 (56%), Positives = 55/72 (76%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GLAHS SR K+KF+ ++VD M++QA+ +LD LDK++N++ MR REWY WHFPEL KIV
Sbjct: 149 LGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTLDKDINSFAMRVREWYSWHFPELVKIVN 208
Query: 450 DNVAFVKTIKTI 461
DN + K K I
Sbjct: 209 DNYLYAKVSKII 220
Score = 208 (78.3 bits), Expect = 6.7e-34, Sum P(3) = 6.7e-34
Identities = 40/58 (68%), Positives = 50/58 (86%)
Query: 645 SLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKMGSY 702
SL NLAK P+ST+QILGAEKALFRALKT+ +TPKYGLI+HS IG++S KNKG++ +
Sbjct: 317 SLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARF 374
Score = 41 (19.5 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 3 VLFETPAGYAFFKLLDEKKL-QEADNLYESFQTPQGANKVLKLKHFEKF 50
+L E+P+GY F+ ++ Q + + S +V++L F F
Sbjct: 5 LLSESPSGYGLFEGHGSDEIGQNTEAVRSSVSDLSRFGRVVQLTAFHPF 53
>FB|FBgn0038964 [details] [associations]
symbol:Nop56 "Nop56" species:7227 "Drosophila melanogaster"
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS;NAS] [GO:0022008
"neurogenesis" evidence=IMP] Pfam:PF01798 GO:GO:0022008
eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
EMBL:BT001613 ProteinModelPortal:Q8IGT5 SMR:Q8IGT5 STRING:Q8IGT5
PaxDb:Q8IGT5 PRIDE:Q8IGT5 FlyBase:FBgn0038964 InParanoid:Q8IGT5
OrthoDB:EOG4V6WZ4 ArrayExpress:Q8IGT5 Bgee:Q8IGT5 Uniprot:Q8IGT5
Length = 496
Score = 463 (168.0 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 106/225 (47%), Positives = 144/225 (64%)
Query: 439 WHFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELN 498
+HF +L K TD A V + GL HS SR K+KF+ + D MI+Q+++LLD LDK++N
Sbjct: 128 FHFAKLVKGFTDKSAGVAQL---GLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVN 184
Query: 499 NYMMRCREWYGWHFPELGKIVTDN---------LKRNDNSTRDKTSASDLSEILPEDXXX 549
+ MR REWY +HFPEL KIV DN +K N T+D+ DL +I+ +
Sbjct: 185 TFSMRIREWYSYHFPELVKIVPDNYMFAKAAKFIKDRKNLTQDQLE--DLEKIVMDSAKA 242
Query: 550 XXXXXXX-ISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMG 608
+SMG +IS D+ NI L ++V+++S YR +L YL ++M VAPNL L+G
Sbjct: 243 QAIIGAAKMSMGMDISIVDLMNIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIG 302
Query: 609 ELVGARLVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHP 653
+ VGARL++ AGSL NLAK+PASTVQILGAEKALFR+L + P
Sbjct: 303 DQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSNTP 347
Score = 356 (130.4 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 91/246 (36%), Positives = 132/246 (53%)
Query: 458 IKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGK 517
+ +GL HS SR K+KF+ + D MI+Q+++LLD LDK++N + MR REWY +HFPEL K
Sbjct: 144 VAQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVK 203
Query: 518 IVTDNLKRNDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQ 577
IV DN + K +L++ ED + + + + D
Sbjct: 204 IVPDNYMFAKAAKFIK-DRKNLTQDQLEDLEKIVMDSAKAQAIIGAAKMSMGMDISIVDL 262
Query: 578 V-LEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQIL 636
+ +E+ + R + ++ N L+ + + + Q G+ L H S
Sbjct: 263 MNIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGDQVGA--RLISHAGS----- 315
Query: 637 GAEKALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNK 696
L NLAK+PASTVQILGAEKALFRALKT+ +TPKYGLIYHS IG++ KNK
Sbjct: 316 ---------LTNLAKYPASTVQILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGLKNK 366
Query: 697 GKMGSY 702
G++ +
Sbjct: 367 GRISRF 372
Score = 221 (82.9 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 46/100 (46%), Positives = 67/100 (67%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL HS SR K+KF+ + D MI+Q+++LLD LDK++N + MR REWY +HFPEL KIV
Sbjct: 147 LGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVKIVP 206
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLKFSPDKV--DTMIVQAV 487
DN F K K I +L++ +L+ +K+ D+ QA+
Sbjct: 207 DNYMFAKAAKFIKDRKNLTQDQLE-DLEKIVMDSAKAQAI 245
Score = 45 (20.9 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 1 MLVLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGA-NKVLKLKHFEKF 50
+ VL+E AG++ F + + +++ ES T N ++KL F F
Sbjct: 4 LYVLYEHAAGFSLFSVKEFEEVSMFLPQVESSVTDLAKFNSIVKLAGFAPF 54
>UNIPROTKB|Q4KLK7 [details] [associations]
symbol:Nol5a "RCG26515, isoform CRA_c" species:10116
"Rattus norvegicus" [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
[GO:0070761 "pre-snoRNP complex" evidence=IEA] Pfam:PF01798
RGD:1308892 GO:GO:0030515 GO:GO:0070761 EMBL:CH473949 GO:GO:0005732
CTD:10528 eggNOG:COG1498 HOGENOM:HOG000196309 KO:K14564
OrthoDB:EOG41G342 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075068 EMBL:BC099149 IPI:IPI00357923
RefSeq:NP_001020903.1 UniGene:Rn.145204 STRING:Q4KLK7
Ensembl:ENSRNOT00000009564 GeneID:362214 KEGG:rno:362214
HOVERGEN:HBG007270 InParanoid:Q4KLK7 NextBio:679052
Genevestigator:Q4KLK7 Uniprot:Q4KLK7
Length = 588
Score = 464 (168.4 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 106/222 (47%), Positives = 142/222 (63%)
Query: 440 HFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNN 499
HF L K +TD ++ K +GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N
Sbjct: 128 HFHNLVKGLTD-LSACKA--QLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINT 184
Query: 500 YMMRCREWYGWHFPELGKIVTDN-----LKRNDNSTRD--KTSASDLSEILPEDXXXXXX 552
+ MR REWYG+HFPEL KI+ DN L + + R+ + L EI +
Sbjct: 185 FSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEEKLEKLEEITMDGAKAKAI 244
Query: 553 XXXX-ISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELV 611
SMG +IS D+ NI +V+ +S YR L++YL+S+M VAP+L+ L+GE V
Sbjct: 245 LDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHNYLRSKMSQVAPSLSALIGEAV 304
Query: 612 GARLVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHP 653
GARL+A AGSL NLAK+PASTVQILGAEKALFR+L P
Sbjct: 305 GARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
Score = 377 (137.8 bits), Expect = 2.5e-33, Sum P(2) = 2.5e-33
Identities = 96/242 (39%), Positives = 136/242 (56%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KI+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 205
Query: 521 DNLKRNDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLE 580
DN + + +L+E E + S + + D ++
Sbjct: 206 DNATYC-RLAQFIGNRRELNEEKLEKLEEITMDGAKAKAILDASRSSMGMDISAID-LIN 263
Query: 581 ISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
I S+ ++ + R ++ L M + V L A G + A + G
Sbjct: 264 IESFSSRVVSLSEYRQ-SLHNYLRSKMSQ-VAPSLSALIGEAVG-----ARLIAHAG--- 313
Query: 641 ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKMG 700
SL NLAK+PASTVQILGAEKALFRALKT+ +TPKYGLI+HS IG+++ KNKG++
Sbjct: 314 ----SLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRIS 369
Query: 701 SY 702
Y
Sbjct: 370 RY 371
Score = 241 (89.9 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 46/102 (45%), Positives = 70/102 (68%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KI+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 205
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLD 491
DN + + + IG L+ KL+ +++ +A ++LD
Sbjct: 206 DNATYCRLAQFIGNRRELNEEKLE-KLEEITMDGAKAKAILD 246
Score = 42 (19.8 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 3 VLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFI 51
VLFE GYA L K+++E S PQ VL L F +
Sbjct: 6 VLFEHAVGYALLAL---KEVEEI-----SLLLPQVEECVLNLGKFHNVV 46
>UNIPROTKB|O00567 [details] [associations]
symbol:NOP56 "Nucleolar protein 56" species:9606 "Homo
sapiens" [GO:0008219 "cell death" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005730 "nucleolus" evidence=TAS] [GO:0006364 "rRNA processing"
evidence=TAS] [GO:0030515 "snoRNA binding" evidence=IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=IDA] [GO:0031428 "box C/D snoRNP complex" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070761 "pre-snoRNP
complex" evidence=IDA] Reactome:REACT_17015 Pfam:PF01798
GO:GO:0005737 GO:GO:0008219 GO:GO:0030515 GO:GO:0070761
GO:GO:0006364 GO:GO:0031428 EMBL:AL049712 CTD:10528 eggNOG:COG1498
HOGENOM:HOG000196309 KO:K14564 OrthoDB:EOG41G342 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 EMBL:Y12065 EMBL:BC104791
EMBL:BC104793 IPI:IPI00411937 RefSeq:NP_006383.2 UniGene:Hs.376064
ProteinModelPortal:O00567 SMR:O00567 IntAct:O00567 STRING:O00567
PhosphoSite:O00567 SWISS-2DPAGE:O00567 PaxDb:O00567 PRIDE:O00567
Ensembl:ENST00000329276 GeneID:10528 KEGG:hsa:10528 UCSC:uc002wgh.3
GeneCards:GC20P002698 HGNC:HGNC:15911 HPA:HPA049918 MIM:614153
MIM:614154 neXtProt:NX_O00567 Orphanet:276198 PharmGKB:PA164724063
InParanoid:O00567 OMA:QEAPQEN PhylomeDB:O00567 ChiTaRS:NOP56
GenomeRNAi:10528 NextBio:39942 ArrayExpress:O00567 Bgee:O00567
Genevestigator:O00567 GermOnline:ENSG00000101361 Uniprot:O00567
Length = 594
Score = 460 (167.0 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 105/222 (47%), Positives = 141/222 (63%)
Query: 440 HFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNN 499
HF L K +TD ++ K +GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N
Sbjct: 128 HFHNLVKGLTD-LSACKA--QLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINT 184
Query: 500 YMMRCREWYGWHFPELGKIVTDN-----LKRNDNSTRD--KTSASDLSEILPEDXXXXXX 552
+ MR REWYG+HFPEL KI+ DN L + + R+ + L E+ +
Sbjct: 185 FSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEDKLEKLEELTMDGAKAKAI 244
Query: 553 XXXX-ISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELV 611
SMG +IS D+ NI +V+ +S YR L+ YL+S+M VAP+L+ L+GE V
Sbjct: 245 LDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAV 304
Query: 612 GARLVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHP 653
GARL+A AGSL NLAK+PASTVQILGAEKALFR+L P
Sbjct: 305 GARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
Score = 378 (138.1 bits), Expect = 8.1e-34, Sum P(2) = 8.1e-34
Identities = 96/242 (39%), Positives = 136/242 (56%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KI+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 205
Query: 521 DNLKRNDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLE 580
DN + + +L+E E + S + + D ++
Sbjct: 206 DNATYC-RLAQFIGNRRELNEDKLEKLEELTMDGAKAKAILDASRSSMGMDISAID-LIN 263
Query: 581 ISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
I S+ ++ + R ++ L M + V L A G + A + G
Sbjct: 264 IESFSSRVVSLSEYRQ-SLHTYLRSKMSQ-VAPSLSALIGEAVG-----ARLIAHAG--- 313
Query: 641 ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKMG 700
SL NLAK+PASTVQILGAEKALFRALKT+ +TPKYGLI+HS IG+++ KNKG++
Sbjct: 314 ----SLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRIS 369
Query: 701 SY 702
Y
Sbjct: 370 RY 371
Score = 239 (89.2 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 43/84 (51%), Positives = 61/84 (72%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KI+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 205
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLK 473
DN + + + IG L+ KL+
Sbjct: 206 DNATYCRLAQFIGNRRELNEDKLE 229
Score = 46 (21.3 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 3 VLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFI 51
VLFE GYA L K+++E S PQ VL L F +
Sbjct: 6 VLFEHAVGYALLAL---KEVEEI-----SLLQPQVEESVLNLGKFHSIV 46
>MGI|MGI:1914384 [details] [associations]
symbol:Nop56 "NOP56 ribonucleoprotein" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030515 "snoRNA binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070761 "pre-snoRNP
complex" evidence=ISO] Reactome:REACT_93132 MGI:MGI:1914384
Pfam:PF01798 GO:GO:0005737 GO:GO:0005730 GO:GO:0030515
GO:GO:0042254 GO:GO:0070761 GO:GO:0005732 CTD:10528 eggNOG:COG1498
HOGENOM:HOG000196309 KO:K14564 OrthoDB:EOG41G342 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 OMA:QEAPQEN ChiTaRS:NOP56
EMBL:AK009799 EMBL:AK011481 EMBL:AK077795 EMBL:AK150258
EMBL:BC002231 EMBL:BC021355 IPI:IPI00318048 RefSeq:NP_077155.2
UniGene:Mm.29363 ProteinModelPortal:Q9D6Z1 SMR:Q9D6Z1 IntAct:Q9D6Z1
STRING:Q9D6Z1 PhosphoSite:Q9D6Z1 PaxDb:Q9D6Z1 PRIDE:Q9D6Z1
Ensembl:ENSMUST00000103198 GeneID:67134 KEGG:mmu:67134
GeneTree:ENSGT00550000075068 InParanoid:Q9D6Z1 NextBio:323680
Bgee:Q9D6Z1 CleanEx:MM_NOL5A Genevestigator:Q9D6Z1
GermOnline:ENSMUSG00000027405 Uniprot:Q9D6Z1
Length = 580
Score = 463 (168.0 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 107/222 (48%), Positives = 141/222 (63%)
Query: 440 HFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNN 499
HF L K +TD ++ K +GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N
Sbjct: 128 HFHNLVKGLTD-LSACKA--QLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINT 184
Query: 500 YMMRCREWYGWHFPELGKIVTDN-----LKRNDNSTRD--KTSASDLSEILPEDXXXXXX 552
+ MR REWYG+HFPEL KIV DN L + + R+ + L EI +
Sbjct: 185 FSMRVREWYGYHFPELVKIVNDNATYCRLAQFIGNRRELNEEKLEKLEEITMDGAKAKAI 244
Query: 553 XXXX-ISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELV 611
SMG +IS D+ NI +V+ +S YR L+ YL+S+M VAP+L+ L+GE V
Sbjct: 245 LDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAV 304
Query: 612 GARLVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHP 653
GARL+A AGSL NLAK+PASTVQILGAEKALFR+L P
Sbjct: 305 GARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
Score = 379 (138.5 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 97/242 (40%), Positives = 136/242 (56%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KIV
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIVN 205
Query: 521 DNLKRNDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLE 580
DN + + +L+E E + S + + D ++
Sbjct: 206 DNATYC-RLAQFIGNRRELNEEKLEKLEEITMDGAKAKAILDASRSSMGMDISAID-LIN 263
Query: 581 ISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
I S+ ++ + R ++ L M + V L A G + A + G
Sbjct: 264 IESFSSRVVSLSEYRQ-SLHTYLRSKMSQ-VAPSLSALIGEAVG-----ARLIAHAG--- 313
Query: 641 ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKMG 700
SL NLAK+PASTVQILGAEKALFRALKT+ +TPKYGLI+HS IG+++ KNKG++
Sbjct: 314 ----SLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRIS 369
Query: 701 SY 702
Y
Sbjct: 370 RY 371
Score = 242 (90.2 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 47/102 (46%), Positives = 70/102 (68%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KIV
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIVN 205
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLD 491
DN + + + IG L+ KL+ +++ +A ++LD
Sbjct: 206 DNATYCRLAQFIGNRRELNEEKLE-KLEEITMDGAKAKAILD 246
Score = 42 (19.8 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 3 VLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFI 51
VLFE GYA L K+++E S PQ VL L F +
Sbjct: 6 VLFEHAVGYALLAL---KEVEEI-----SLLLPQVEECVLNLGKFHNVV 46
>UNIPROTKB|E2QU53 [details] [associations]
symbol:NOP56 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070761 "pre-snoRNP complex" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=IEA] Pfam:PF01798
GO:GO:0030515 GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 OMA:QEAPQEN GeneTree:ENSGT00550000075068
EMBL:AAEX03013839 Ensembl:ENSCAFT00000010731 Uniprot:E2QU53
Length = 597
Score = 460 (167.0 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 105/222 (47%), Positives = 141/222 (63%)
Query: 440 HFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNN 499
HF L K +TD ++ K +GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N
Sbjct: 128 HFHNLVKGLTD-LSACKA--QLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINT 184
Query: 500 YMMRCREWYGWHFPELGKIVTDN-----LKRNDNSTRD--KTSASDLSEILPEDXXXXXX 552
+ MR REWYG+HFPEL KI+ DN L + + R+ + L E+ +
Sbjct: 185 FSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEEKLEKLEELTMDGAKAKAI 244
Query: 553 XXXX-ISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELV 611
SMG +IS D+ NI +V+ +S YR L+ YL+S+M VAP+L+ L+GE V
Sbjct: 245 LDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAV 304
Query: 612 GARLVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHP 653
GARL+A AGSL NLAK+PASTVQILGAEKALFR+L P
Sbjct: 305 GARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
Score = 240 (89.5 bits), Expect = 2.1e-35, Sum P(3) = 2.1e-35
Identities = 43/84 (51%), Positives = 61/84 (72%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KI+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 205
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLK 473
DN + + + IG L+ KL+
Sbjct: 206 DNATYCRLAQFIGNRRELNEEKLE 229
Score = 219 (82.2 bits), Expect = 2.1e-35, Sum P(3) = 2.1e-35
Identities = 42/58 (72%), Positives = 51/58 (87%)
Query: 645 SLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKMGSY 702
SL NLAK+PASTVQILGAEKALFRALKT+ +TPKYGLI+HS IG+++ KNKG++ Y
Sbjct: 314 SLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRY 371
Score = 43 (20.2 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 3 VLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFI 51
VLFE GYA L K+++E S PQ VL L F +
Sbjct: 6 VLFEHAVGYALLAL---KEVEEI-----SLLLPQVEECVLNLGKFHNIV 46
>UNIPROTKB|F1MW06 [details] [associations]
symbol:NOP56 "Nucleolar protein 56" species:9913 "Bos
taurus" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=IEA] Pfam:PF01798
IPI:IPI00712128 UniGene:Bt.49005 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 OMA:QEAPQEN GeneTree:ENSGT00550000075068
EMBL:DAAA02036191 Ensembl:ENSBTAT00000025042 Uniprot:F1MW06
Length = 596
Score = 457 (165.9 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 106/222 (47%), Positives = 140/222 (63%)
Query: 440 HFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNN 499
HF L K +TD ++ K +GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N
Sbjct: 128 HFHNLVKGLTD-LSACKA--QLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINT 184
Query: 500 YMMRCREWYGWHFPELGKIVTDNLK--RNDN--STRDKTSASDLSEI--LPEDXXXXXXX 553
+ MR REWYG+HFPEL KI+ DN R R + + L ++ L D
Sbjct: 185 FSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRKELNEEKLEKLEELTMDAAKAKAI 244
Query: 554 --XXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELV 611
SMG +IS D+ NI +V+ +S YR L+ YL+S+M VAP+L+ L+GE V
Sbjct: 245 LDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAV 304
Query: 612 GARLVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHP 653
GARL+A AGSL NLAK+PASTVQILGAEKALFR+L P
Sbjct: 305 GARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
Score = 380 (138.8 bits), Expect = 9.1e-34, Sum P(2) = 9.1e-34
Identities = 96/242 (39%), Positives = 136/242 (56%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KI+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 205
Query: 521 DNLKRNDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLE 580
DN + + +L+E E + S + + D ++
Sbjct: 206 DNATYC-RLAQFIGNRKELNEEKLEKLEELTMDAAKAKAILDASRSSMGMDISAID-LIN 263
Query: 581 ISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
I S+ ++ + R ++ L M + V L A G + A + G
Sbjct: 264 IESFSSRVVSLSEYRQ-SLHTYLRSKMSQ-VAPSLSALIGEAVG-----ARLIAHAG--- 313
Query: 641 ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKMG 700
SL NLAK+PASTVQILGAEKALFRALKT+ +TPKYGLI+HS IG+++ KNKG++
Sbjct: 314 ----SLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRIS 369
Query: 701 SY 702
Y
Sbjct: 370 RY 371
Score = 241 (89.9 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 46/102 (45%), Positives = 70/102 (68%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KI+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 205
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLD 491
DN + + + IG L+ KL+ +++ +A ++LD
Sbjct: 206 DNATYCRLAQFIGNRKELNEEKLE-KLEELTMDAAKAKAILD 246
Score = 43 (20.2 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 3 VLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFI 51
VLFE GYA L K+++E S PQ VL L F +
Sbjct: 6 VLFEHAVGYALLAL---KEVEEI-----SLLLPQVEECVLNLGKFHNIV 46
>ZFIN|ZDB-GENE-040109-1 [details] [associations]
symbol:nop56 "NOP56 ribonucleoprotein homolog"
species:7955 "Danio rerio" [GO:0007507 "heart development"
evidence=IMP] Pfam:PF01798 ZFIN:ZDB-GENE-040109-1 GO:GO:0007507
HOGENOM:HOG000196309 OrthoDB:EOG41G342 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 GeneTree:ENSGT00550000075068 HOVERGEN:HBG007270
EMBL:CT027620 EMBL:AY648814 IPI:IPI00932106 UniGene:Dr.76899
STRING:Q6DRE5 Ensembl:ENSDART00000114524 InParanoid:Q6DRE5
OMA:LINIECF Uniprot:Q6DRE5
Length = 548
Score = 453 (164.5 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 102/222 (45%), Positives = 139/222 (62%)
Query: 440 HFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNN 499
HF L K +T A + +GL HS SR K+KF+ ++ D MI+Q+++LLD LDK++N
Sbjct: 129 HFHSLVKGLTAQAA---SKAQLGLGHSYSRAKVKFNVNRADNMIIQSIALLDQLDKDINT 185
Query: 500 YMMRCREWYGWHFPELGKIVTDN---LKRNDNSTRDKTSASDLSEILPEDXXXXXXXXXX 556
+ MR REWYG+HFPEL KIV+DN K K + ++ E + E
Sbjct: 186 FSMRVREWYGYHFPELIKIVSDNSTYCKLAKLIGNRKELSEEMLEAMEEITMDSAKAQAI 245
Query: 557 I-----SMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELV 611
+ SMG +IS D+ NI +V+ ++ YR +L +YL+S+M VAPNL L+GE+V
Sbjct: 246 LDASRSSMGMDISPIDLINIECFSSRVVSLTDYRQELQEYLRSKMGQVAPNLAALIGEVV 305
Query: 612 GARLVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHP 653
GARL++ AGSL NLAK+PASTVQILGAEKALFR+L P
Sbjct: 306 GARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 347
Score = 384 (140.2 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 96/242 (39%), Positives = 136/242 (56%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL HS SR K+KF+ ++ D MI+Q+++LLD LDK++N + MR REWYG+HFPEL KIV+
Sbjct: 147 LGLGHSYSRAKVKFNVNRADNMIIQSIALLDQLDKDINTFSMRVREWYGYHFPELIKIVS 206
Query: 521 DNLKRNDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLE 580
DN + + +LSE + E + S + + D ++
Sbjct: 207 DN-STYCKLAKLIGNRKELSEEMLEAMEEITMDSAKAQAILDASRSSMGMDISPID-LIN 264
Query: 581 ISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
I + ++ R + L MG+ V L A G ++ A + G
Sbjct: 265 IECFSSRVVSLTDYRQ-ELQEYLRSKMGQ-VAPNLAALIGEVVG-----ARLISHAG--- 314
Query: 641 ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKMG 700
SL NLAK+PASTVQILGAEKALFRALKT+ +TPKYGLI+HS IG+++ KNKG++
Sbjct: 315 ----SLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRIS 370
Query: 701 SY 702
Y
Sbjct: 371 RY 372
Score = 241 (89.9 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 47/102 (46%), Positives = 70/102 (68%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL HS SR K+KF+ ++ D MI+Q+++LLD LDK++N + MR REWYG+HFPEL KIV+
Sbjct: 147 LGLGHSYSRAKVKFNVNRADNMIIQSIALLDQLDKDINTFSMRVREWYGYHFPELIKIVS 206
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLD 491
DN + K K IG LS L+ + +++ +A ++LD
Sbjct: 207 DNSTYCKLAKLIGNRKELSEEMLE-AMEEITMDSAKAQAILD 247
Score = 46 (21.3 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 3 VLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFI 51
VLFE AGYA LL K+++E L PQ VL + F +
Sbjct: 6 VLFEHAAGYA---LLAVKEVEEIGMLL-----PQVEESVLNVGKFSSVV 46
>UNIPROTKB|Q3SZ63 [details] [associations]
symbol:NOP56 "Nucleolar protein 56" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] Pfam:PF01798 GO:GO:0005737 GO:GO:0005730
GO:GO:0042254 EMBL:BC103114 IPI:IPI00712128 RefSeq:NP_001028794.1
UniGene:Bt.49005 ProteinModelPortal:Q3SZ63 STRING:Q3SZ63
PRIDE:Q3SZ63 GeneID:404165 KEGG:bta:404165 CTD:10528 eggNOG:COG1498
HOGENOM:HOG000196309 InParanoid:Q3SZ63 KO:K14564 OrthoDB:EOG41G342
NextBio:20817597 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 Uniprot:Q3SZ63
Length = 596
Score = 457 (165.9 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 106/222 (47%), Positives = 140/222 (63%)
Query: 440 HFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNN 499
HF L K +TD ++ K +GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N
Sbjct: 128 HFHNLVKGLTD-LSACKA--QLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINT 184
Query: 500 YMMRCREWYGWHFPELGKIVTDNLK--RNDN--STRDKTSASDLSEI--LPEDXXXXXXX 553
+ MR REWYG+HFPEL KI+ DN R R + + L ++ L D
Sbjct: 185 FSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRKELNEEKLEKLEELTMDAAKAKAI 244
Query: 554 --XXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELV 611
SMG +IS D+ NI +V+ +S YR L+ YL+S+M VAP+L+ L+GE V
Sbjct: 245 LDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAV 304
Query: 612 GARLVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHP 653
GARL+A AGSL NLAK+PASTVQILGAEKALFR+L P
Sbjct: 305 GARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
Score = 380 (138.8 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 96/242 (39%), Positives = 136/242 (56%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KI+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 205
Query: 521 DNLKRNDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLE 580
DN + + +L+E E + S + + D ++
Sbjct: 206 DNATYC-RLAQFIGNRKELNEEKLEKLEELTMDAAKAKAILDASRSSMGMDISAID-LIN 263
Query: 581 ISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
I S+ ++ + R ++ L M + V L A G + A + G
Sbjct: 264 IESFSSRVVSLSEYRQ-SLHTYLRSKMSQ-VAPSLSALIGEAVG-----ARLIAHAG--- 313
Query: 641 ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKMG 700
SL NLAK+PASTVQILGAEKALFRALKT+ +TPKYGLI+HS IG+++ KNKG++
Sbjct: 314 ----SLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRIS 369
Query: 701 SY 702
Y
Sbjct: 370 RY 371
Score = 241 (89.9 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 46/102 (45%), Positives = 70/102 (68%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KI+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 205
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLD 491
DN + + + IG L+ KL+ +++ +A ++LD
Sbjct: 206 DNATYCRLAQFIGNRKELNEEKLE-KLEELTMDAAKAKAILD 246
Score = 39 (18.8 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 3 VLFETPAGYAFFKLLDEKKLQEADNLYESFQTPQGANKVLKLKHFEKFI 51
VLFE GYA L K+++E L PQ VL L F +
Sbjct: 6 VLFEHAVGYALLAL---KEVEEIILLL-----PQVEECVLNLGKFHNIV 46
>DICTYBASE|DDB_G0285679 [details] [associations]
symbol:nol5a "NOP5 family protein" species:44689
"Dictyostelium discoideum" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0285679 Pfam:PF01798 GO:GO:0005730
GenomeReviews:CM000153_GR EMBL:AAFI02000079 GO:GO:0006364
GO:GO:0005732 eggNOG:COG1498 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 RefSeq:XP_638211.1
ProteinModelPortal:Q54MT2 STRING:Q54MT2 PRIDE:Q54MT2
EnsemblProtists:DDB0237576 GeneID:8625259 KEGG:ddi:DDB_G0285679
OMA:DSMVNDT ProtClustDB:CLSZ2430191 Uniprot:Q54MT2
Length = 540
Score = 432 (157.1 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 91/202 (45%), Positives = 126/202 (62%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL HS SR K+KF+ KVD MI+Q++ LL+ LDK+LN + MR REWY WHFPEL KI+
Sbjct: 144 LGLGHSYSRSKVKFNVHKVDNMIIQSICLLEQLDKDLNTFFMRLREWYSWHFPELLKIIE 203
Query: 521 DNL------KRNDNSTR-DKTSASDLSEILP--EDXXXXXXXXXXISMGTEISDDDIENI 571
+ K N + S ++ EIL E SMG +IS D+ +
Sbjct: 204 SQVHFAKLAKLIQNKKNLTEESLDEIKEILEDNESLAKDVLSAAKASMGGDISQIDLVTV 263
Query: 572 LLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPAS 631
+ D+V+ + YR L YL +M +APNL+ L+G+ +GA+L+++AGSL +LAK+PAS
Sbjct: 264 MHFADRVISLDEYRTNLTQYLAKKMQDIAPNLSALVGDRIGAKLISRAGSLTSLAKYPAS 323
Query: 632 TVQILGAEKALFRSLLNLAKHP 653
TVQILGAEKALFR++ K P
Sbjct: 324 TVQILGAEKALFRAMKVRGKTP 345
Score = 227 (85.0 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 47/104 (45%), Positives = 64/104 (61%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL HS SR K+KF+ KVD MI+Q++ LL+ LDK+LN + MR REWY WHFPEL KI+
Sbjct: 144 LGLGHSYSRSKVKFNVHKVDNMIIQSICLLEQLDKDLNTFFMRLREWYSWHFPELLKIIE 203
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDL 493
V F K K I +L+ L D++ ++ SL D+
Sbjct: 204 SQVHFAKLAKLIQNKKNLTEESL----DEIKEILEDNESLAKDV 243
Score = 56 (24.8 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 3 VLFETPAGYAFFKLLDEKKLQE-ADNLYESFQTPQGANKVLKL 44
+LFET G+ F+L + + E D + +S Q +KV K+
Sbjct: 5 ILFETATGFNIFQLSGMESIAEFTDQVQKSMQDFSKFSKVCKM 47
>RGD|1308892 [details] [associations]
symbol:Nop56 "NOP56 ribonucleoprotein" species:10116 "Rattus
norvegicus" [GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0070761 "pre-snoRNP complex" evidence=ISO] Pfam:PF01798
RGD:1308892 GO:GO:0030515 GO:GO:0070761 GO:GO:0005732
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
IPI:IPI00357923 UniGene:Rn.145204 HOVERGEN:HBG007270 EMBL:BC086568
ProteinModelPortal:Q5RJN5 STRING:Q5RJN5 UCSC:RGD:1308892
InParanoid:Q5RJN5 ArrayExpress:Q5RJN5 Genevestigator:Q5RJN5
Uniprot:Q5RJN5
Length = 499
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 106/222 (47%), Positives = 142/222 (63%)
Query: 440 HFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNN 499
HF L K +TD ++ K +GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N
Sbjct: 39 HFHNLVKGLTD-LSACKA--QLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINT 95
Query: 500 YMMRCREWYGWHFPELGKIVTDN-----LKRNDNSTRD--KTSASDLSEILPEDXXXXXX 552
+ MR REWYG+HFPEL KI+ DN L + + R+ + L EI +
Sbjct: 96 FSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEEKLEKLEEITMDGAKAKAI 155
Query: 553 XXXX-ISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELV 611
SMG +IS D+ NI +V+ +S YR L++YL+S+M VAP+L+ L+GE V
Sbjct: 156 LDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHNYLRSKMSQVAPSLSALIGEAV 215
Query: 612 GARLVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHP 653
GARL+A AGSL NLAK+PASTVQILGAEKALFR+L P
Sbjct: 216 GARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 257
Score = 377 (137.8 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 96/242 (39%), Positives = 136/242 (56%)
Query: 461 IGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 520
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KI+
Sbjct: 57 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 116
Query: 521 DNLKRNDNSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLE 580
DN + + +L+E E + S + + D ++
Sbjct: 117 DNATYC-RLAQFIGNRRELNEEKLEKLEEITMDGAKAKAILDASRSSMGMDISAID-LIN 174
Query: 581 ISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
I S+ ++ + R ++ L M + V L A G + A + G
Sbjct: 175 IESFSSRVVSLSEYRQ-SLHNYLRSKMSQ-VAPSLSALIGEAVG-----ARLIAHAG--- 224
Query: 641 ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTKNKGKMG 700
SL NLAK+PASTVQILGAEKALFRALKT+ +TPKYGLI+HS IG+++ KNKG++
Sbjct: 225 ----SLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRIS 280
Query: 701 SY 702
Y
Sbjct: 281 RY 282
Score = 241 (89.9 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 46/102 (45%), Positives = 70/102 (68%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KI+
Sbjct: 57 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 116
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLD 491
DN + + + IG L+ KL+ +++ +A ++LD
Sbjct: 117 DNATYCRLAQFIGNRRELNEEKLE-KLEEITMDGAKAKAILD 157
>WB|WBGene00010627 [details] [associations]
symbol:K07C5.4 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] Pfam:PF01798 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040018 GO:GO:0040035 EMBL:Z71181
eggNOG:COG1498 HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 GeneTree:ENSGT00550000075068
OMA:QQLHEYI PIR:T23405 RefSeq:NP_505660.1 ProteinModelPortal:Q21276
SMR:Q21276 STRING:Q21276 PaxDb:Q21276 EnsemblMetazoa:K07C5.4.1
EnsemblMetazoa:K07C5.4.2 GeneID:179442 KEGG:cel:CELE_K07C5.4
UCSC:K07C5.4 CTD:179442 WormBase:K07C5.4 InParanoid:Q21276
NextBio:905416 Uniprot:Q21276
Length = 486
Score = 428 (155.7 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 98/225 (43%), Positives = 138/225 (61%)
Query: 440 HFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNN 499
HF L K + + + K + L HS SR K+KF +VD M++Q+++LLD LDK++N
Sbjct: 131 HFERLAKNLPHH-SLSKA--QLSLGHSYSRSKVKFDVHRVDNMVIQSIALLDQLDKDINL 187
Query: 500 YMMRCREWYGWHFPELGKIVTDNLKRNDNST----RDKTSASD-----LSEILPEDXXXX 550
+ MR REWY +H+PEL ++ D K + + R+K + ++ + EIL D
Sbjct: 188 FGMRIREWYSYHYPELFRLAPDQYKYSRLAVAILDRNKMAENENLENEILEILDNDSEKT 247
Query: 551 XXX--XXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMG 608
SMG +ISD D+ENI +V + YR QL++Y+K RM AP+L+ L+G
Sbjct: 248 AQIIEAARTSMGMDISDLDLENIKRFAARVSSLMEYRQQLHEYIKDRMDHCAPSLSALIG 307
Query: 609 ELVGARLVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHP 653
E VGARL++ AGSL NLAK+PASTVQILGAEKALFR+L + P
Sbjct: 308 EQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSNTP 352
Score = 180 (68.4 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 43/136 (31%), Positives = 75/136 (55%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+ L HS SR K+KF +VD M++Q+++LLD LDK++N + MR REWY +H+PEL ++
Sbjct: 149 LSLGHSYSRSKVKFDVHRVDNMVIQSIALLDQLDKDINLFGMRIREWYSYHYPELFRLAP 208
Query: 450 DNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYG 509
D + + I L R K+ + + ++ I++ +LD+ ++ + R G
Sbjct: 209 DQYKYSRLAVAI-----LDRNKMAEN-ENLENEILE---ILDNDSEKTAQIIEAARTSMG 259
Query: 510 WHFPELGKIVTDNLKR 525
+L +N+KR
Sbjct: 260 MDISDLD---LENIKR 272
Score = 47 (21.6 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 3 VLFETPAGYAFFKL--LDEKKL--QEADNLY-ESFQTPQGANKVLKLKHFEKF 50
VL+E AGYA K+ D+ L QE D + + ++ Q +++L F+ F
Sbjct: 8 VLYEHAAGYALMKIKEFDDAGLILQEVDAAHADGYKFSQ----IVELASFDPF 56
>UNIPROTKB|H9L0K4 [details] [associations]
symbol:H9L0K4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
[GO:0070761 "pre-snoRNP complex" evidence=IEA] Pfam:PF01798
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075068 EMBL:AADN02044049 EMBL:AADN02044050
EMBL:AADN02044051 Ensembl:ENSGALT00000023411 Uniprot:H9L0K4
Length = 486
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 104/216 (48%), Positives = 139/216 (64%)
Query: 440 HFPELGKIVTDNVAFVKTIKTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNN 499
HF L K +T A + +GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N
Sbjct: 101 HFHALVKGLTAQSA---SKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINT 157
Query: 500 YMMRCREWYGWHFPELGKIVTDNLKRNDNSTRDKTSASDLSEILPEDXXXXXXXXXX-IS 558
+ MR REWYG+HFPEL KIV++N T + S L EI+ + S
Sbjct: 158 FSMRVREWYGYHFPELIKIVSENY------TEE--SLEGLEEIVMDGAKAQAILEASRSS 209
Query: 559 MGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQ 618
MG +IS D+ NI +V+ +S YR L +YL+S+M VAP+L+ L+GE+VGARL++
Sbjct: 210 MGMDISPIDLINIESFSSRVISLSEYRKGLQEYLRSKMSQVAPSLSALIGEVVGARLISH 269
Query: 619 AGSLLNLAKHPASTVQILGAEKALFRSLLNLAKHPA 654
AGSL NLAK+PASTVQILGAEKALFR + PA
Sbjct: 270 AGSLTNLAKYPASTVQILGAEKALFRYRCGVVALPA 305
Score = 217 (81.4 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 38/62 (61%), Positives = 52/62 (83%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL HS SR K+KF+ ++VD MI+Q++SLLD LDK++N + MR REWYG+HFPEL KIV+
Sbjct: 119 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELIKIVS 178
Query: 450 DN 451
+N
Sbjct: 179 EN 180
Score = 104 (41.7 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 22/24 (91%), Positives = 23/24 (95%)
Query: 645 SLLNLAKHPASTVQILGAEKALFR 668
SL NLAK+PASTVQILGAEKALFR
Sbjct: 272 SLTNLAKYPASTVQILGAEKALFR 295
>UNIPROTKB|G4N2E5 [details] [associations]
symbol:MGG_07915 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0000154 "rRNA modification"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISS] [GO:0031428 "box
C/D snoRNP complex" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] Pfam:PF01798 EMBL:CM001233 GO:GO:0030686
GO:GO:0032040 GO:GO:0030490 GO:GO:0000154 GO:GO:0031428 KO:K14564
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 RefSeq:XP_003713157.1
ProteinModelPortal:G4N2E5 EnsemblFungi:MGG_07915T0 GeneID:2683842
KEGG:mgr:MGG_07915 Uniprot:G4N2E5
Length = 514
Score = 405 (147.6 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 89/203 (43%), Positives = 124/203 (61%)
Query: 460 TIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIV 519
++GL H+ SR K+KF+ + D I+Q ++ LD LDK +N MR REWYGWHFPEL KIV
Sbjct: 154 SLGLGHAYSRNKVKFNVHRNDNHIIQQIATLDALDKGINAGCMRVREWYGWHFPELIKIV 213
Query: 520 TDN-------LKRNDNSTRDKTSASDLSEILPEDXXXXXXX--XXXISMGTEISDDDIEN 570
+DN L + D + D++ +L ED +SMG +IS+ D+E
Sbjct: 214 SDNVTYARLVLLIGNKKELDDSKLHDIAAVLDEDGDKAQAIIDAAKVSMGQDISEPDVEM 273
Query: 571 ILLLCDQVLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPA 630
+ V ++++YR L + L S+M VAPNL ++G V ARL++ AGSL NL+K+PA
Sbjct: 274 VKSFATSVSKMAAYRKVLAESLDSKMGIVAPNLQCILGTPVAARLISHAGSLTNLSKYPA 333
Query: 631 STVQILGAEKALFRSLLNLAKHP 653
ST+QILGAEKALFR+L P
Sbjct: 334 STLQILGAEKALFRALKTKGNTP 356
Score = 209 (78.6 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 41/83 (49%), Positives = 54/83 (65%)
Query: 390 VGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT 449
+GL H+ SR K+KF+ + D I+Q ++ LD LDK +N MR REWYGWHFPEL KIV+
Sbjct: 155 LGLGHAYSRNKVKFNVHRNDNHIIQQIATLDALDKGINAGCMRVREWYGWHFPELIKIVS 214
Query: 450 DNVAFVKTIKTIGLAHSLSRYKL 472
DNV + + + IG L KL
Sbjct: 215 DNVTYARLVLLIGNKKELDDSKL 237
Score = 52 (23.4 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 3 VLFETPAGYAFFKLLDE 19
+L ETPAGYA F+++ +
Sbjct: 7 LLHETPAGYAIFEVVHQ 23
>UNIPROTKB|Q97ZH3 [details] [associations]
symbol:SSO0939 "Pre mRNA splicing protein" species:273057
"Sulfolobus solfataricus P2" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF01798 EMBL:AE006641 GenomeReviews:AE006641_GR
PDB:3ID5 PDB:3ID6 PDB:3PLA PDBsum:3ID5 PDBsum:3ID6 PDBsum:3PLA
eggNOG:COG1498 KO:K14564 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 ProtClustDB:PRK14552 PIR:H90244
RefSeq:NP_342425.1 PDB:3ICX PDBsum:3ICX ProteinModelPortal:Q97ZH3
DIP:DIP-48938N IntAct:Q97ZH3 GeneID:1455182 KEGG:sso:SSO0939
HOGENOM:HOG000227188 OMA:FLPASTI EvolutionaryTrace:Q97ZH3
Uniprot:Q97ZH3
Length = 412
Score = 339 (124.4 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 77/196 (39%), Positives = 119/196 (60%)
Query: 463 LAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDN 522
L+ +R KL+ + K D + +QAV +DD+DK +N + R REWY HFPEL K++ D+
Sbjct: 120 LSLEYTRRKLRSAAQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDH 179
Query: 523 LKRNDNSTR--DK--TSASDLSEI-LPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQ 577
+ +R D+ + L E+ E S+G +IS+DD+ + ++ +
Sbjct: 180 EEYATIVSRFGDRGFLTIDSLKELGFNEQRINRILDAAKKSIGADISEDDLSAMRMIANT 239
Query: 578 VLEISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILG 637
+L++ + R L +YL+ M VAPN+T L+G +GARL++ AGSL LAK PAST+Q+LG
Sbjct: 240 ILDLYNIRRNLNNYLEGVMKEVAPNVTALVGPALGARLLSIAGSLDELAKMPASTIQVLG 299
Query: 638 AEKALFRSLLNLAKHP 653
AEKALFR+L + + P
Sbjct: 300 AEKALFRALRSGGRPP 315
Score = 147 (56.8 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 392 LAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDN 451
L+ +R KL+ + K D + +QAV +DD+DK +N + R REWY HFPEL K++ D+
Sbjct: 120 LSLEYTRRKLRSAAQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDH 179
Query: 452 VAFVKTIKTIG 462
+ + G
Sbjct: 180 EEYATIVSRFG 190
Score = 134 (52.2 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 636 LGAEK-ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTK 694
LGA ++ SL LAK PAST+Q+LGAEKALFRAL++ PK+G+I+ I S
Sbjct: 273 LGARLLSIAGSLDELAKMPASTIQVLGAEKALFRALRSGGRPPKHGIIFQYPAIHTSPRW 332
Query: 695 NKGKM 699
+GK+
Sbjct: 333 QRGKI 337
Score = 40 (19.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 404 SPDKVDTMIVQAVSLLD--DLDKELNNYM 430
S D + M + A ++LD ++ + LNNY+
Sbjct: 226 SEDDLSAMRMIANTILDLYNIRRNLNNYL 254
>UNIPROTKB|Q58105 [details] [associations]
symbol:MJ0694 "Uncharacterized NOP5 family protein MJ0694"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0005515
"protein binding" evidence=IPI] Pfam:PF01798 EMBL:L77117
GenomeReviews:L77117_GR eggNOG:COG1498 KO:K14564 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358
PIR:F64386 RefSeq:NP_247678.1 PDB:3T7Z PDBsum:3T7Z
ProteinModelPortal:Q58105 IntAct:Q58105 GeneID:1451561
KEGG:mja:MJ_0694 OMA:KYPNPPK ProtClustDB:PRK14552 Uniprot:Q58105
Length = 414
Score = 299 (110.3 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 71/184 (38%), Positives = 100/184 (54%)
Query: 467 LSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNLKRN 526
L++ +K + D +I+Q + DLDK LN R REWY +FPEL +V +
Sbjct: 110 LTKKVIKSYAQQKDKIIIQVAEAISDLDKTLNLLSERLREWYSLYFPELDHLVNKHEVYA 169
Query: 527 DNST----RDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEIS 582
+ T R + S L +ILP SMG E+ D D++ I+ +++ +
Sbjct: 170 NLITKLGKRKNFTKSQLKKILPSKLAGKIAEAAKNSMGGELEDYDLDVIVKFAEEINHLY 229
Query: 583 SYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEKAL 642
R +LY+YL+ M APN+T L G +GARL+ AG L LAK PAST+Q+LGAEKAL
Sbjct: 230 EKRKELYNYLEKLMNEEAPNITKLAGVSLGARLIGLAGGLEKLAKMPASTIQVLGAEKAL 289
Query: 643 FRSL 646
F L
Sbjct: 290 FAHL 293
Score = 135 (52.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 396 LSRYKLKFSPDKVDTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNVAFV 455
L++ +K + D +I+Q + DLDK LN R REWY +FPEL +V + +
Sbjct: 110 LTKKVIKSYAQQKDKIIIQVAEAISDLDKTLNLLSERLREWYSLYFPELDHLVNKHEVYA 169
Query: 456 KTIKTIGLAHSLSRYKLK-FSPDKVDTMIVQAVSLLDDLDKELNNY 500
I +G + ++ +LK P K+ I +A + + EL +Y
Sbjct: 170 NLITKLGKRKNFTKSQLKKILPSKLAGKIAEAAK--NSMGGELEDY 213
Score = 130 (50.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 32/65 (49%), Positives = 41/65 (63%)
Query: 636 LGAEK-ALFRSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQSSTK 694
LGA L L LAK PAST+Q+LGAEKALF L+ + PK+G+IY+ LI S
Sbjct: 258 LGARLIGLAGGLEKLAKMPASTIQVLGAEKALFAHLRMGVEPPKHGIIYNHPLIQGSPHW 317
Query: 695 NKGKM 699
+GK+
Sbjct: 318 QRGKI 322
>UNIPROTKB|E7EN72 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PANTHER:PTHR13904 IPI:IPI00167198 HGNC:HGNC:15446
ProteinModelPortal:E7EN72 SMR:E7EN72 PRIDE:E7EN72
Ensembl:ENST00000445811 ArrayExpress:E7EN72 Bgee:E7EN72
Uniprot:E7EN72
Length = 284
Score = 228 (85.3 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A +L +++ ELN R+ Y FPEL +V + L K NS +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
+L +IL + G ++S++++E + CD LE+++ + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA + +LGA++
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
Score = 83 (34.3 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 411 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNVAFVKTIKTIGLAHSLSRY 470
+IV A +L +++ ELN R+ Y FPEL +V + + +++T+K +G +SL +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELG--NSLDKC 149
Query: 471 K 471
K
Sbjct: 150 K 150
Score = 79 (32.9 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L NL+K PA + +LGA++ + P G IYHS ++
Sbjct: 238 LTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIV 280
>UNIPROTKB|F1RNI3 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0070990 "snRNP
binding" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0015030 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 GO:GO:0070990
EMBL:FP476135 RefSeq:XP_003127461.2 Ensembl:ENSSSCT00000003624
GeneID:100520791 KEGG:ssc:100520791 Uniprot:F1RNI3
Length = 499
Score = 232 (86.7 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A +L +++ ELN R+ Y FPEL +V + L K NS +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
+L +IL + G ++SD+++E + CD LE+++ + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA + +LGA++
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
Score = 79 (32.9 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L NL+K PA + +LGA++ + P G IYHS ++
Sbjct: 238 LTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIV 280
Score = 41 (19.5 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 280 KLEKYHGKRLEKKKFKTEFDAAEETPATPDTSS 312
K+E+Y K+ + + +AA E P D ++
Sbjct: 66 KIEEYISKQADAAEVMGPVEAAPEYPVIVDANN 98
>MGI|MGI:1916238 [details] [associations]
symbol:Prpf31 "PRP31 pre-mRNA processing factor 31 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=ISO;ISA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal body"
evidence=ISA] [GO:0016607 "nuclear speck" evidence=ISA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0043021
"ribonucleoprotein complex binding" evidence=ISA] [GO:0046540
"U4/U6 x U5 tri-snRNP complex" evidence=ISA] [GO:0070990 "snRNP
binding" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR027105 MGI:MGI:1916238 Pfam:PF01798 GO:GO:0016607
GO:GO:0005681 GO:GO:0000244 GO:GO:0003723 GO:GO:0015030
GO:GO:0043021 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
EMBL:AC130680 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 CTD:26121
GeneTree:ENSGT00550000075069 HOVERGEN:HBG082193 KO:K12844
OMA:VESDPEY OrthoDB:EOG4W6NW1 InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 GO:GO:0070990 EMBL:AY040823 EMBL:AK005294
EMBL:AK033190 EMBL:AK033283 EMBL:AK044398 EMBL:AK044457
EMBL:AK051260 EMBL:CT010189 EMBL:BC018376 EMBL:BC057877
EMBL:BC061461 IPI:IPI00331424 IPI:IPI00459791 IPI:IPI00625183
IPI:IPI00742282 IPI:IPI00742413 RefSeq:NP_001153186.1
RefSeq:NP_081604.3 UniGene:Mm.246863 ProteinModelPortal:Q8CCF0
SMR:Q8CCF0 STRING:Q8CCF0 PhosphoSite:Q8CCF0 PaxDb:Q8CCF0
PRIDE:Q8CCF0 DNASU:68988 Ensembl:ENSMUST00000008517
Ensembl:ENSMUST00000108636 Ensembl:ENSMUST00000179769 GeneID:68988
KEGG:mmu:68988 UCSC:uc009evi.2 UCSC:uc012ewf.1 InParanoid:Q8CCF0
NextBio:328355 Bgee:Q8CCF0 Genevestigator:Q8CCF0
GermOnline:ENSMUSG00000008373 Uniprot:Q8CCF0
Length = 499
Score = 232 (86.7 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A +L +++ ELN R+ Y FPEL +V + L K NS +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
+L +IL + G ++SD+++E + CD LE+++ + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA + +LGA++
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
Score = 79 (32.9 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L NL+K PA + +LGA++ + P G IYHS ++
Sbjct: 238 LTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIV 280
>UNIPROTKB|E7ESA8 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 IPI:IPI00738596
HGNC:HGNC:15446 ProteinModelPortal:E7ESA8 SMR:E7ESA8 PRIDE:E7ESA8
Ensembl:ENST00000419967 UCSC:uc010yek.1 ArrayExpress:E7ESA8
Bgee:E7ESA8 Uniprot:E7ESA8
Length = 450
Score = 228 (85.3 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A +L +++ ELN R+ Y FPEL +V + L K NS +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
+L +IL + G ++S++++E + CD LE+++ + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA + +LGA++
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
Score = 79 (32.9 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L NL+K PA + +LGA++ + P G IYHS ++
Sbjct: 238 LTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIV 280
>UNIPROTKB|Q5U5C5 [details] [associations]
symbol:prpf31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:8355 "Xenopus laevis" [GO:0071339 "MLL1 complex"
evidence=ISS] InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380
GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 GO:GO:0071339
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 CTD:26121 HOVERGEN:HBG082193 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 EMBL:BC084759
RefSeq:NP_001088437.1 UniGene:Xl.48511 ProteinModelPortal:Q5U5C5
SMR:Q5U5C5 GeneID:495301 KEGG:xla:495301 Xenbase:XB-GENE-865857
Uniprot:Q5U5C5
Length = 498
Score = 227 (85.0 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNLK-----RNDNSTRDKTSA 536
+IV A +L +++ ELN R+ Y FPEL +V + L + + DK
Sbjct: 91 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNNLDKCKN 150
Query: 537 SD-LSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
++ L +IL + G +++D+++E I CD LE++ + ++Y+Y++SR
Sbjct: 151 NENLQQILTNATIMVVSVTASTTQGQQLTDEELERIEEACDMALELNQSKHRIYEYVESR 210
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA V +LGA++
Sbjct: 211 MSFIAPNLSIIVGASTAAKIMGIAGGLTNLSKMPACNVMLLGAQR 255
Score = 82 (33.9 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L NL+K PA V +LGA++ + P G IYHS+++
Sbjct: 237 LTNLSKMPACNVMLLGAQRKTLTGFSSTSVLPHTGYIYHSEIV 279
>UNIPROTKB|E7EVX8 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 HGNC:HGNC:15446
IPI:IPI00657721 ProteinModelPortal:E7EVX8 SMR:E7EVX8 PRIDE:E7EVX8
Ensembl:ENST00000391755 ArrayExpress:E7EVX8 Bgee:E7EVX8
Uniprot:E7EVX8
Length = 493
Score = 228 (85.3 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A +L +++ ELN R+ Y FPEL +V + L K NS +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
+L +IL + G ++S++++E + CD LE+++ + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA + +LGA++
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
Score = 79 (32.9 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L NL+K PA + +LGA++ + P G IYHS ++
Sbjct: 238 LTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIV 280
>UNIPROTKB|E1BM48 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0070990 "snRNP
binding" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0015030 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
CTD:26121 GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 GO:GO:0070990
EMBL:DAAA02047818 IPI:IPI00691365 RefSeq:NP_001193214.1
UniGene:Bt.5160 Ensembl:ENSBTAT00000010198 GeneID:513577
KEGG:bta:513577 NextBio:20870922 Uniprot:E1BM48
Length = 499
Score = 228 (85.3 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A +L +++ ELN R+ Y FPEL +V + L K NS +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
+L +IL + G ++S++++E + CD LE+++ + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA + +LGA++
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
Score = 79 (32.9 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L NL+K PA + +LGA++ + P G IYHS ++
Sbjct: 238 LTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIV 280
>UNIPROTKB|F1PKI0 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0070990 "snRNP binding" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA] [GO:0005687
"U4 snRNP" evidence=IEA] [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] InterPro:IPR027105 Pfam:PF01798
GO:GO:0016607 GO:GO:0000244 GO:GO:0015030 GO:GO:0071339
GO:GO:0046540 GO:GO:0005687 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 CTD:26121 GeneTree:ENSGT00550000075069
KO:K12844 OMA:VESDPEY InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 GO:GO:0070990 EMBL:AAEX03000741 RefSeq:XP_850917.1
Ensembl:ENSCAFT00000004264 GeneID:476389 KEGG:cfa:476389
Uniprot:F1PKI0
Length = 499
Score = 228 (85.3 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A +L +++ ELN R+ Y FPEL +V + L K NS +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
+L +IL + G ++S++++E + CD LE+++ + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA + +LGA++
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
Score = 79 (32.9 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L NL+K PA + +LGA++ + P G IYHS ++
Sbjct: 238 LTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIV 280
>UNIPROTKB|Q8WWY3 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IMP;IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0015030 "Cajal body"
evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IDA] [GO:0046540
"U4/U6 x U5 tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070990 "snRNP binding" evidence=IPI] [GO:0005690
"U4atac snRNP" evidence=TAS] [GO:0005687 "U4 snRNP" evidence=IDA]
[GO:0005684 "U2-type spliceosomal complex" evidence=IC]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0003723 Orphanet:791 GO:GO:0015030 GO:GO:0071339
GO:GO:0046540 GO:GO:0005684 GO:GO:0005687 EMBL:AC012314 PDB:2OZB
PDB:3SIU PDB:3SIV PDBsum:2OZB PDBsum:3SIU PDBsum:3SIV
eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 CTD:26121 HOVERGEN:HBG082193
KO:K12844 OMA:VESDPEY OrthoDB:EOG4W6NW1 InterPro:IPR019175
PANTHER:PTHR13904 Pfam:PF09785 EMBL:AY040822 EMBL:AF308303
EMBL:AL050369 EMBL:AK098547 EMBL:BC117389 IPI:IPI00167198
IPI:IPI00292000 IPI:IPI00738596 RefSeq:NP_056444.3
UniGene:Hs.515598 ProteinModelPortal:Q8WWY3 SMR:Q8WWY3
IntAct:Q8WWY3 STRING:Q8WWY3 PhosphoSite:Q8WWY3 DMDM:90101442
PaxDb:Q8WWY3 PRIDE:Q8WWY3 DNASU:26121 Ensembl:ENST00000321030
Ensembl:ENST00000571534 Ensembl:ENST00000571610
Ensembl:ENST00000572776 Ensembl:ENST00000574214
Ensembl:ENST00000576100 Ensembl:ENST00000576581
Ensembl:ENST00000576817 Ensembl:ENST00000576989 GeneID:26121
KEGG:hsa:26121 UCSC:uc002qdh.2 GeneCards:GC19P054618
H-InvDB:HIX0027609 H-InvDB:HIX0137464 HGNC:HGNC:15446 HPA:HPA041939
MIM:600138 MIM:606419 neXtProt:NX_Q8WWY3 PharmGKB:PA33814
HOGENOM:HOG000207983 InParanoid:Q8WWY3 PhylomeDB:Q8WWY3
EvolutionaryTrace:Q8WWY3 GenomeRNAi:26121 NextBio:48131
ArrayExpress:Q8WWY3 Bgee:Q8WWY3 CleanEx:HS_PRPF31
Genevestigator:Q8WWY3 GermOnline:ENSG00000105618 GO:GO:0005690
GO:GO:0070990 Uniprot:Q8WWY3
Length = 499
Score = 228 (85.3 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A +L +++ ELN R+ Y FPEL +V + L K NS +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
+L +IL + G ++S++++E + CD LE+++ + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA + +LGA++
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
Score = 79 (32.9 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L NL+K PA + +LGA++ + P G IYHS ++
Sbjct: 238 LTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIV 280
>UNIPROTKB|Q6NVP6 [details] [associations]
symbol:prpf31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0071339 "MLL1
complex" evidence=ISS] InterPro:IPR027105 Pfam:PF01798
GO:GO:0005681 GO:GO:0003723 GO:GO:0060041 GO:GO:0000398
GO:GO:0071339 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 CTD:26121
GeneTree:ENSGT00550000075069 HOVERGEN:HBG082193 KO:K12844
OrthoDB:EOG4W6NW1 InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 EMBL:BC067959 RefSeq:NP_998859.1
UniGene:Str.66282 ProteinModelPortal:Q6NVP6 SMR:Q6NVP6
STRING:Q6NVP6 Ensembl:ENSXETT00000023852 GeneID:407890
KEGG:xtr:407890 Xenbase:XB-GENE-489336 InParanoid:Q6NVP6
OMA:ESTEGKX Bgee:Q6NVP6 Uniprot:Q6NVP6
Length = 498
Score = 227 (85.0 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNLK-----RNDNSTRDKTSA 536
+IV A +L +++ ELN R+ Y FPEL +V + L + + DK
Sbjct: 91 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNNLDKCKN 150
Query: 537 SD-LSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
++ L +IL + G +++D+++E I CD LE++ + ++Y+Y++SR
Sbjct: 151 NENLQQILTNATIMVVSVTASTTQGQQLTDEELERIEEACDMALELNQSKHRIYEYVESR 210
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA V +LGA++
Sbjct: 211 MSFIAPNLSIIVGASTAAKIMGIAGGLTNLSKMPACNVMLLGAQR 255
Score = 80 (33.2 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L NL+K PA V +LGA++ + P G IYHS ++
Sbjct: 237 LTNLSKMPACNVMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIV 279
>ZFIN|ZDB-GENE-040426-1561 [details] [associations]
symbol:prpf31 "PRP31 pre-mRNA processing factor 31
homolog (yeast)" species:7955 "Danio rerio" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;IMP] [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IMP] [GO:0071339 "MLL1
complex" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR027105 Pfam:PF01798
ZFIN:ZDB-GENE-040426-1561 GO:GO:0005681 GO:GO:0003723 GO:GO:0060041
GO:GO:0000398 GO:GO:0071339 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358
EMBL:BC055531 IPI:IPI00508030 RefSeq:NP_956798.1 UniGene:Dr.76439
ProteinModelPortal:Q7SXM7 SMR:Q7SXM7 STRING:Q7SXM7 PRIDE:Q7SXM7
Ensembl:ENSDART00000137029 GeneID:393476 KEGG:dre:393476 CTD:26121
GeneTree:ENSGT00550000075069 HOGENOM:HOG000202033
HOVERGEN:HBG082193 InParanoid:Q7SXM7 KO:K12844 OMA:VESDPEY
OrthoDB:EOG4W6NW1 NextBio:20814506 ArrayExpress:Q7SXM7 Bgee:Q7SXM7
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 Uniprot:Q7SXM7
Length = 508
Score = 229 (85.7 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 52/165 (31%), Positives = 88/165 (53%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A +L ++D ELN R+ Y FPEL +V + L K N+ +
Sbjct: 103 LIVAANNLTVEIDNELNIIHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNNLEKCKN 162
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
L +IL + GT + DD+++ + CD LE++ + ++Y+Y++SR
Sbjct: 163 NETLQQILTNATIMVVSVTASTTQGTMLGDDELQRLEEACDMALELNQSKHRIYEYVESR 222
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA + +LGA++
Sbjct: 223 MSFIAPNLSIIVGASTAAKIMGVAGGLTNLSKMPACNLMLLGAQR 267
Score = 70 (29.7 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L NL+K PA + +LGA++ + P G IYH ++
Sbjct: 249 LTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVV 291
>UNIPROTKB|E7ESX0 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PANTHER:PTHR13904 HGNC:HGNC:15446 IPI:IPI00657783
ProteinModelPortal:E7ESX0 SMR:E7ESX0 PRIDE:E7ESX0
Ensembl:ENST00000445124 ArrayExpress:E7ESX0 Bgee:E7ESX0
Uniprot:E7ESX0
Length = 276
Score = 228 (85.3 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A +L +++ ELN R+ Y FPEL +V + L K NS +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
+L +IL + G ++S++++E + CD LE+++ + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA + +LGA++
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
>UNIPROTKB|E7EU94 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PANTHER:PTHR13904 HGNC:HGNC:15446 IPI:IPI00657750
ProteinModelPortal:E7EU94 SMR:E7EU94 PRIDE:E7EU94
Ensembl:ENST00000447810 ArrayExpress:E7EU94 Bgee:E7EU94
Uniprot:E7EU94
Length = 261
Score = 228 (85.3 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A +L +++ ELN R+ Y FPEL +V + L K NS +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
+L +IL + G ++S++++E + CD LE+++ + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL+I++G A+++ AG L NL+K PA + +LGA++
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
>FB|FBgn0036487 [details] [associations]
symbol:Prp31 species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS] [GO:0000244 "assembly
of spliceosomal tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR027105 Pfam:PF01798 EMBL:AE014296 GO:GO:0022008
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 HSSP:O28191
EMBL:AY051928 RefSeq:NP_648756.1 UniGene:Dm.9673 SMR:Q9VUM1
STRING:Q9VUM1 EnsemblMetazoa:FBtr0075642 GeneID:39655
KEGG:dme:Dmel_CG6876 UCSC:CG6876-RA CTD:39655 FlyBase:FBgn0036487
InParanoid:Q9VUM1 OrthoDB:EOG4JWSVZ GenomeRNAi:39655 NextBio:814716
Uniprot:Q9VUM1
Length = 501
Score = 204 (76.9 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 47/165 (28%), Positives = 85/165 (51%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A ++ D+D E++ +E Y FPEL ++ + K N +
Sbjct: 100 LIVDANAIAVDIDNEISIVHKFTKEKYQKRFPELDSLIVGEIEYLLAVKELGNDLDQVKN 159
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
L IL + + GT ++ + I C+ +E+++++ ++Y+Y++SR
Sbjct: 160 NEKLQAILTQATIMIVSVTASTTQGTMLTPAEKAKIDEACEMAIELNNFKSKIYEYVESR 219
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M +APNL++++G A+L+ AG L L+K PA VQ+LGA+K
Sbjct: 220 MTFIAPNLSMIVGASTAAKLLGIAGGLSKLSKMPACNVQVLGAQK 264
Score = 44 (20.5 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 16 LLDEKKLQEADNLYESFQTPQGANKVLKLKHFEK 49
LL EK + A NL + T Q ++ KL+ E+
Sbjct: 34 LLAEKLAKPAPNLMDVDVTVQSVRELCKLRDSER 67
>DICTYBASE|DDB_G0289595 [details] [associations]
symbol:prpf31 "pre-mRNA processing factor 31"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA;ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IEA;ISS] [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=IEA] InterPro:IPR027105
dictyBase:DDB_G0289595 Pfam:PF01798 GenomeReviews:CM000154_GR
GO:GO:0000398 GO:GO:0046540 EMBL:AAFI02000146 eggNOG:COG1498
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 OMA:RDHYSIR
RefSeq:XP_002649103.1 EnsemblProtists:DDB0304959 GeneID:8627218
KEGG:ddi:DDB_G0289595 ProtClustDB:CLSZ2735590 Uniprot:C7G068
Length = 460
Score = 197 (74.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 51/180 (28%), Positives = 88/180 (48%)
Query: 466 SLSRYKLKFSPDKVD-TMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNLK 524
SL +K D + +IV+ + ++ E+ RE Y FPEL V + L
Sbjct: 56 SLPEKGVKTGQDSEEHKLIVECNQMAQEIQHEIYLIHKFVRERYSKKFPELESSVQNPLD 115
Query: 525 RNDNSTRDKTSAS----DLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLE 580
+ R K L+++LP+ + G ++ +++ ++ CD LE
Sbjct: 116 YINCVKRIKNENDLINVQLNDLLPKSTIMVLLVTLSSTAGKNLTQEELMRVIDACDMGLE 175
Query: 581 ISSYRGQLYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
+ ++ + YL+SRM +APNL++LMG + ++L+ AGS+ LA PA +Q LGA+K
Sbjct: 176 LDLHKKNILHYLESRMTYIAPNLSVLMGSSIASKLIGIAGSIQQLANIPAGHLQTLGADK 235
Score = 45 (20.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 645 SLLNLAKHPASTVQILGAEK-AL--FRALKTKRDTPKYGLIYHSQLI 688
S+ LA PA +Q LGA+K AL F + ++ + GLI ++
Sbjct: 216 SIQQLANIPAGHLQTLGADKKALAGFSGMSNRKF--QMGLISQCDIV 260
>WB|WBGene00022458 [details] [associations]
symbol:prp-31 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR027105 Pfam:PF01798
GO:GO:0009792 GO:GO:0002009 GO:GO:0016477 GO:GO:0008406
GO:GO:0018996 GO:GO:0042127 EMBL:FO080728 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 GO:GO:0001703 eggNOG:COG1498
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 RefSeq:NP_491527.1 ProteinModelPortal:Q9N592
SMR:Q9N592 STRING:Q9N592 PaxDb:Q9N592 EnsemblMetazoa:Y110A7A.8
GeneID:172146 KEGG:cel:CELE_Y110A7A.8 UCSC:Y110A7A.8.2 CTD:172146
WormBase:Y110A7A.8 InParanoid:Q9N592 NextBio:874215 Uniprot:Q9N592
Length = 504
Score = 177 (67.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 60/233 (25%), Positives = 104/233 (44%)
Query: 419 LDDLDKELNNYMMRCREWYGWHFPELGKIVTDN--VAFVKTIKTIGLAHSLSRYKLKFSP 476
LDD +E M ++ H ++ K+ + +A VK ++ + L K+ +P
Sbjct: 37 LDDDIEEATEEPMDTTKYASVH--DVAKLARSDEYLALVKQLE-VELKRPQDEVKVT-AP 92
Query: 477 DKVDT---MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRND 527
+ D +IV+ + D+D E+N R+ Y FPEL +V + L +
Sbjct: 93 LEADPQYKLIVKLSHVAADIDNEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLLG 152
Query: 528 NSTRDKTSASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQ 587
N K L IL + G ++ +++E ++ C+ ++ R +
Sbjct: 153 NEINSKVVKEQLGGILDASTCMVVSVTVSTTQGVKLEPNELETVMDACNLAAQLHVNRLE 212
Query: 588 LYDYLKSRMMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
++ ++ RM +APNL L+G A LV+QAG L LA P+ VQ+LG K
Sbjct: 213 MHQLVEWRMALIAPNLVALLGSTTTAHLVSQAGGLSPLATMPSCNVQVLGKTK 265
Score = 68 (29.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 649 LAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLIGQS--STKNK 696
LA P+ VQ+LG K T P +G IY QL+ + KNK
Sbjct: 250 LATMPSCNVQVLGKTKKNLIGFSTVSTNPHHGFIYFHQLVQKMPPDLKNK 299
>RGD|1305832 [details] [associations]
symbol:Prpf31 "PRP31 pre-mRNA processing factor 31 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000244
"assembly of spliceosomal tri-snRNP" evidence=IEA;ISO] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005687 "U4 snRNP" evidence=ISO]
[GO:0015030 "Cajal body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=ISO] [GO:0043021 "ribonucleoprotein complex binding"
evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA;ISO] [GO:0070990 "snRNP binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR027105
Pfam:PF01798 RGD:1305832 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PANTHER:PTHR13904 EMBL:AC103574
IPI:IPI00948419 Ensembl:ENSRNOT00000064433 UCSC:RGD:1305832
ArrayExpress:F1M5K0 Uniprot:F1M5K0
Length = 195
Score = 176 (67.0 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 41/143 (28%), Positives = 76/143 (53%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV A +L +++ ELN R+ Y FPEL +V + L K NS +
Sbjct: 40 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 99
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
+L +IL + G ++SD+++E + CD LE+++ + ++Y+Y++SR
Sbjct: 100 NENLQQILTNATIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESR 159
Query: 596 MMAVAPNLTILMGELVGARLVAQ 618
M +APNL+I++G A+++ +
Sbjct: 160 MSFIAPNLSIIIGASTAAKIMGE 182
>GENEDB_PFALCIPARUM|PFD0450c [details] [associations]
symbol:PFD0450c "pre-mrna splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380
GO:GO:0005681 EMBL:AL844503 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 KO:K12844 InterPro:IPR019175
PANTHER:PTHR13904 Pfam:PF09785 HOGENOM:HOG000207983
RefSeq:XP_002808648.1 EnsemblProtists:PFD0450c:mRNA GeneID:812409
KEGG:pfa:PFD0450c EuPathDB:PlasmoDB:PF3D7_0409100
ProtClustDB:CLSZ2433500 Uniprot:C0H4A0
Length = 534
Score = 198 (74.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 50/177 (28%), Positives = 94/177 (53%)
Query: 480 DTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNLKRND--NSTRDKTSAS 537
D MI + + + +D E+ N ++ Y FPEL IV ++ N R++
Sbjct: 152 DVMIEKCMETILKIDTEILNIHKYVKDIYSTKFPELDSIVYSPVEYISVVNKIRNEVDLK 211
Query: 538 --DLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
D S+ILP ++ G + D+ ++N + C++ ++++ YR + YL+S+
Sbjct: 212 NIDFSDILPNTTVMAITVASSMTTGICLPDNLLKNCISFCNEGIQLNEYRNIILLYLESK 271
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGA-EKALFRSLLNLAK 651
M +APN+T+L+G + ARL++ GSL NL+ + + ++ + +K+LF L N+ K
Sbjct: 272 MFYLAPNVTMLLGSSLTARLISAVGSLKNLSIISSQNLIVIASTKKSLF-GLSNVHK 327
>UNIPROTKB|C0H4A0 [details] [associations]
symbol:PFD0450c "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380 GO:GO:0005681
EMBL:AL844503 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
SMART:SM00931 KO:K12844 InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 HOGENOM:HOG000207983 RefSeq:XP_002808648.1
EnsemblProtists:PFD0450c:mRNA GeneID:812409 KEGG:pfa:PFD0450c
EuPathDB:PlasmoDB:PF3D7_0409100 ProtClustDB:CLSZ2433500
Uniprot:C0H4A0
Length = 534
Score = 198 (74.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 50/177 (28%), Positives = 94/177 (53%)
Query: 480 DTMIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNLKRND--NSTRDKTSAS 537
D MI + + + +D E+ N ++ Y FPEL IV ++ N R++
Sbjct: 152 DVMIEKCMETILKIDTEILNIHKYVKDIYSTKFPELDSIVYSPVEYISVVNKIRNEVDLK 211
Query: 538 --DLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
D S+ILP ++ G + D+ ++N + C++ ++++ YR + YL+S+
Sbjct: 212 NIDFSDILPNTTVMAITVASSMTTGICLPDNLLKNCISFCNEGIQLNEYRNIILLYLESK 271
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGA-EKALFRSLLNLAK 651
M +APN+T+L+G + ARL++ GSL NL+ + + ++ + +K+LF L N+ K
Sbjct: 272 MFYLAPNVTMLLGSSLTARLISAVGSLKNLSIISSQNLIVIASTKKSLF-GLSNVHK 327
>POMBASE|SPBC119.13c [details] [associations]
symbol:prp31 "U4/U6 x U5 tri-snRNP complex subunit
Prp31" species:4896 "Schizosaccharomyces pombe" [GO:0000244
"assembly of spliceosomal tri-snRNP" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0007126
"meiosis" evidence=NAS] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] InterPro:IPR027105 PomBase:SPBC119.13c
Pfam:PF01798 GO:GO:0007126 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0005681 GO:GO:0000244 GO:GO:0003723 GO:GO:0046540
GO:GO:0045292 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 PIR:T39311 RefSeq:NP_595294.1
ProteinModelPortal:O42904 IntAct:O42904 STRING:O42904
EnsemblFungi:SPBC119.13c.1 GeneID:2540045 KEGG:spo:SPBC119.13c
OMA:RDHYSIR OrthoDB:EOG4ZCXDV NextBio:20801182 Uniprot:O42904
Length = 518
Score = 191 (72.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 43/162 (26%), Positives = 77/162 (47%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVT---DNLKRNDNSTRDKTSASD 538
+IV + S+ ++D E+ +EWY FPEL +V D K + D ++
Sbjct: 119 LIVDSNSIAMEIDDEILRLHRLVKEWYHDRFPELSSLVLNAFDYCKTVSSLLNDLDNSKT 178
Query: 539 LSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMA 598
LP ++G + D+ I+N+ C+ + ++ + ++ +Y++SR+
Sbjct: 179 KLSFLPSATVMVIATTATTTVGKPLPDEMIKNVKNCCEAIQQLGEEKQKIIEYVQSRISV 238
Query: 599 VAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
VAPNL+ ++G A L+ AG L L K PA + LG +
Sbjct: 239 VAPNLSAVVGSTTAANLIGIAGGLTRLGKFPACNLPALGKRR 280
Score = 50 (22.7 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L L K PA + LG + + + YG +Y S+++
Sbjct: 262 LTRLGKFPACNLPALGKRRLTTIGINNPAVSGDYGFLYMSEIV 304
>TAIR|locus:2195698 [details] [associations]
symbol:emb1220 "AT1G60170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009793 "embryo development ending in
seed dormancy" evidence=NAS] InterPro:IPR027105 Pfam:PF01798
EMBL:CP002684 GO:GO:0003676 GO:GO:0030529 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 EMBL:AY080777
EMBL:AY117155 EMBL:AY084782 IPI:IPI00547292 RefSeq:NP_564754.1
UniGene:At.21797 ProteinModelPortal:Q8RXN6 SMR:Q8RXN6 STRING:Q8RXN6
PRIDE:Q8RXN6 EnsemblPlants:AT1G60170.1 GeneID:842312
KEGG:ath:AT1G60170 TAIR:At1g60170 InParanoid:Q8RXN6
PhylomeDB:Q8RXN6 ProtClustDB:CLSN2688931 ArrayExpress:Q8RXN6
Genevestigator:Q8RXN6 Uniprot:Q8RXN6
Length = 485
Score = 187 (70.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 47/165 (28%), Positives = 87/165 (52%)
Query: 482 MIVQAVSLLDDLDKELNNYMMRCREWYGWHFPELGKIVTDNL------KRNDNSTRDKTS 535
+IV L D++ E+ ++ Y F EL +V + K+ N T +
Sbjct: 95 LIVDCNQLSVDIENEIVIVHNFIKDKYKLKFQELESLVHHPIDYACVVKKIGNET--DLA 152
Query: 536 ASDLSEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSR 595
DL+++LP + G+ + +D ++ +L CD+ L++ S R ++ ++++S+
Sbjct: 153 LVDLADLLPSAIIMVVSVTALTTKGSALPEDVLQKVLEACDRALDLDSARKKVLEFVESK 212
Query: 596 MMAVAPNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
M ++APNL+ ++G V A+L+ AG L LAK PA VQ+LG ++
Sbjct: 213 MGSIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQVLGHKR 257
Score = 47 (21.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 649 LAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQL 687
LAK PA VQ+LG ++ + + G + +++
Sbjct: 242 LAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEI 280
>ASPGD|ASPL0000059636 [details] [associations]
symbol:AN1260 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:BN001308
EMBL:AACD01000017 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 OMA:RDHYSIR OrthoDB:EOG4ZCXDV
RefSeq:XP_658864.1 ProteinModelPortal:Q5BDX0 STRING:Q5BDX0
EnsemblFungi:CADANIAT00001363 GeneID:2877039 KEGG:ani:AN1260.2
Uniprot:Q5BDX0
Length = 521
Score = 128 (50.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 42/161 (26%), Positives = 74/161 (45%)
Query: 496 ELNNYMMRCREWYGWHFPELGKIVTDNLK--------RNDNSTRDK---TSASD-----L 539
EL R+ Y FPEL +VT+++ +N T K TSA + L
Sbjct: 56 ELTRLHKSLRDHYSIRFPELETLVTNSIDYAKTVAILKNGPLTDIKALSTSADNMVGVPL 115
Query: 540 SEILPEDXXXXXXXXXXISMGTEISDDDIENILLLCDQVLEISSYRGQLYDYLKSRMMAV 599
IL + G E+++ +++ ++ C+++L++ R L +++ M +
Sbjct: 116 KSILDGPTLMVVAVEGTTTRGREMTEAELKVVMDTCERILKLDRERTALTQSIQANMNQI 175
Query: 600 APNLTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEK 640
APNL L+G A+ + Q G L LAK PA + G+++
Sbjct: 176 APNLAALVGPETAAQFLNQTGGLRELAKIPACNLGAQGSKR 216
Score = 47 (21.6 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 646 LLNLAKHPASTVQILGAEKALFRALKTKRDTPKYGLIYHSQLI 688
L LAK PA + G+++ T G +Y+S+LI
Sbjct: 198 LRELAKIPACNLGAQGSKRKDGLGFATNTSIRSQGFLYNSELI 240
>SGD|S000003323 [details] [associations]
symbol:PRP31 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000387 "spliceosomal snRNP assembly" evidence=IMP;IDA]
[GO:0046540 "U4/U6 x U5 tri-snRNP complex" evidence=IEA;IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IPI]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR027105
SGD:S000003323 Pfam:PF01798 GO:GO:0005739 EMBL:BK006941
GO:GO:0005681 GO:GO:0003723 GO:GO:0000387 GO:GO:0046540
eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
PROSITE:PS51358 GeneTree:ENSGT00550000075069 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 OrthoDB:EOG4ZCXDV
EMBL:U31970 EMBL:Z72876 EMBL:AY723814 PIR:S64386 RefSeq:NP_011605.1
ProteinModelPortal:P49704 SMR:P49704 DIP:DIP-5355N IntAct:P49704
MINT:MINT-493013 STRING:P49704 PaxDb:P49704 EnsemblFungi:YGR091W
GeneID:852983 KEGG:sce:YGR091W CYGD:YGR091w HOGENOM:HOG000000957
OMA:HRISEAN NextBio:972794 Genevestigator:P49704 GermOnline:YGR091W
Uniprot:P49704
Length = 494
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 50/227 (22%), Positives = 97/227 (42%)
Query: 441 FPELGKIVTDNVAFVKTI----KTIGLAHSLSRYKLKFSPDKVDTMIVQAVSLLDDLDKE 496
F L I D ++ +T K + L L + ++ F K+ + + L+ K
Sbjct: 54 FRTLALISPDRLSLSETAQILPKIVDLKRILQQQEIDFI--KLLPFFNEIIPLIKSNIKL 111
Query: 497 LNNYMMRCREWYGWHFPELGKIVTDNLKRN------DNSTRDKTSASDLSEILPEDXXXX 550
++N+++ Y FPEL ++ L+ + +N K + +L L
Sbjct: 112 MHNFLISL---YSRRFPELSSLIPSPLQYSKVISILENENYSKNESDELFFHLENKAKLT 168
Query: 551 XXXXXXISMGTEISDDDIENI-LLLCDQVLEISSYRGQLY-------DYLKSRMMAVAPN 602
++M + S + E + + Q+LE +S L+ Y+ S++ +APN
Sbjct: 169 REQILVLTMSMKTSFKNKEPLDIKTRTQILEANSILENLWKLQEDIGQYIASKISIIAPN 228
Query: 603 LTILMGELVGARLVAQAGSLLNLAKHPASTVQILGAEKALFRSLLNL 649
+ L+G + A+L+A AG +L ++ P+ + +G K L L L
Sbjct: 229 VCFLVGPEIAAQLIAHAGGVLEFSRIPSCNIASIGKNKHLSHELHTL 275
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 716 571 0.00080 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 62
No. of states in DFA: 614 (65 KB)
Total size of DFA: 288 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.55u 0.12s 41.67t Elapsed: 00:00:03
Total cpu time: 41.57u 0.12s 41.69t Elapsed: 00:00:03
Start: Thu Aug 15 11:37:09 2013 End: Thu Aug 15 11:37:12 2013