BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10024
(69 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 77.0 bits (188), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
MRKVVC ++RP IPNRW +C+ L ++ KIM+ECWY AR TALRIKKT++ +
Sbjct: 267 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 321
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 77.0 bits (188), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
MRKVVC ++RP IPNRW +C+ L ++ KIM+ECWY AR TALRIKKT++ +
Sbjct: 280 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 77.0 bits (188), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
MRKVVC ++RP IPNRW +C+ L ++ KIM+ECWY AR TALRIKKT++ +
Sbjct: 244 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 298
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 77.0 bits (188), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
MRKVVC ++RP IPNRW +C+ L ++ KIM+ECWY AR TALRIKKT++ +
Sbjct: 247 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 301
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
MRKVVC ++RP IPNRW +C+ L ++ KIM+ECWY AR TALRIKKT++ +
Sbjct: 242 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 296
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 76.6 bits (187), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
MRKVVC ++RP IPNRW +C+ L ++ KIM+ECWY AR TALRIKKT++ +
Sbjct: 241 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 71.6 bits (174), Expect = 9e-14, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
MRKVVC+DQ RP IPNRW + L + K+M+ECWY +AR TALRIKKT+ I
Sbjct: 275 MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 329
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
MRKVVC+DQ RP IPNRW + L + K+M+ECWY +AR TALRIKKT+ I
Sbjct: 246 MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
MRKVVC+DQ RP IPNRW + L + K+M+ECWY +AR TALRIKKT+ I
Sbjct: 246 MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
M+KVVC+DQ P IPNR A L + ++M+ECWYP +AR TALRIKKT+ I
Sbjct: 246 MKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKI 300
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
MR++VC+ ++RP+ PNRW + + L + K+M ECW +R TALR+KKT+A +
Sbjct: 275 MREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 30.4 bits (67), Expect = 0.28, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTA 45
M++VV + RP + + W + ++ + ++ECW A AR +A
Sbjct: 262 MQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA 306
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 28.9 bits (63), Expect = 0.68, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
+++VV ++RP I + W L + ++ECW A AR +A +++ ++ I
Sbjct: 254 LQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSAGCVEERVSLI 308
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASI 55
V +M+ CW+ A RPT L++++ + I
Sbjct: 415 VYDVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASI 55
V ++M+ CW+ A RP+ L++++ + I
Sbjct: 234 VYEVMKNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASI 55
V ++M+ CW+ A RP+ L++++ + I
Sbjct: 243 VYEVMKNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASI 55
V ++M+ CW+ A RP+ L++++ + I
Sbjct: 228 VYEVMKNCWHLDAAMRPSFLQLREQLEHI 256
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 269 EVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 269 EVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 273 EVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 268 EVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 327 EVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 268 EVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 266 EVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 26.6 bits (57), Expect = 3.3, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 266 EVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 26.6 bits (57), Expect = 3.4, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 268 EVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 26.6 bits (57), Expect = 3.4, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 286 EVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 267 EVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 263 EVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 268 EVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3PFM|A Chain A, Crystal Structure Of A Eal Domain Of Ggdef Domain
Protein From Pseudomonas Fluorescens Pf
Length = 243
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 18 WHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQAVSYP 65
WH D L + Q + PV AR T L + + S +L +Q + P
Sbjct: 8 WHRLLDRALSEQHFQLYFQPVVAARDTHLVLHYKVLSRLLDEQGQTIP 55
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 260 EVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 26.6 bits (57), Expect = 3.6, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 267 EVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 26.6 bits (57), Expect = 3.6, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 265 EVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 26.6 bits (57), Expect = 3.9, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 29 KIMQECWYPVATARPTALRIKKTIASI 55
++M +CW+P A RP+ + I++I
Sbjct: 287 EVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 30 IMQECWYPVATARPTALRIKKTIASIILSDQAVSYPDV 67
+M++CW+ V + RPT ++ + + I+ Y D+
Sbjct: 284 MMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLDL 321
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 30 IMQECWYPVATARPTALRIKKTIASII 56
+M++CW+ V + RPT ++ + + I+
Sbjct: 325 MMRDCWHAVPSQRPTFKQLVEDLDRIV 351
>pdb|4EIY|A Chain A, Crystal Structure Of The Chimeric Protein Of A2aar-Bril In
Complex With Zm241385 At 1.8a Resolution
Length = 447
Score = 25.8 bits (55), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 7 LDQIRPAIPNRWHACKDLHLVLKIMQECWYPV 38
L++ R + HA K L +++ + CW P+
Sbjct: 339 LERARSTLQKEVHAAKSLAIIVGLFALCWLPL 370
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 25.4 bits (54), Expect = 8.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 30 IMQECWYPVATARPTALRIKKTIASIILSDQAVSYPDV 67
+M++CW+ V + RPT ++ + + I+ Y D+
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDL 328
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 25.4 bits (54), Expect = 8.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 30 IMQECWYPVATARPTALRIKKTIASIILSDQAVSYPDV 67
+M++CW+ V + RPT ++ + + I+ Y D+
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDL 328
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.327 0.136 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,794,908
Number of Sequences: 62578
Number of extensions: 45367
Number of successful extensions: 277
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 237
Number of HSP's gapped (non-prelim): 41
length of query: 69
length of database: 14,973,337
effective HSP length: 39
effective length of query: 30
effective length of database: 12,532,795
effective search space: 375983850
effective search space used: 375983850
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 45 (21.9 bits)