Query psy10024
Match_columns 69
No_of_seqs 114 out of 632
Neff 6.6
Searched_HMMs 46136
Date Fri Aug 16 15:55:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10024.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10024hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2052|consensus 99.7 1.2E-17 2.7E-22 122.2 4.4 62 1-62 449-510 (513)
2 KOG3653|consensus 99.5 1.2E-14 2.5E-19 107.2 2.8 60 1-60 449-508 (534)
3 KOG0192|consensus 99.2 5.9E-11 1.3E-15 84.8 5.5 52 5-61 258-309 (362)
4 KOG4257|consensus 98.8 8.2E-09 1.8E-13 79.5 4.6 49 5-58 604-652 (974)
5 KOG0197|consensus 98.7 1.3E-08 2.9E-13 75.2 4.9 48 6-58 417-464 (468)
6 PHA02988 hypothetical protein; 98.7 4.5E-08 9.7E-13 65.8 4.9 48 5-57 234-281 (283)
7 PF07714 Pkinase_Tyr: Protein 98.6 3.8E-08 8.2E-13 65.1 2.7 41 7-52 219-259 (259)
8 KOG0200|consensus 98.6 9.9E-08 2.1E-12 71.6 5.1 46 6-56 535-580 (609)
9 KOG1095|consensus 98.5 1.7E-07 3.7E-12 74.4 4.4 51 8-63 919-969 (1025)
10 cd05116 PTKc_Syk Catalytic dom 98.5 2E-07 4.2E-12 61.0 4.0 43 8-55 213-255 (257)
11 cd05064 PTKc_EphR_A10 Catalyti 98.4 3.2E-07 7E-12 60.5 4.6 43 8-55 223-265 (266)
12 cd05048 PTKc_Ror Catalytic Dom 98.4 2.9E-07 6.2E-12 60.7 3.6 33 23-55 251-283 (283)
13 cd05115 PTKc_Zap-70 Catalytic 98.4 4E-07 8.7E-12 59.9 4.0 45 7-56 212-256 (257)
14 KOG1026|consensus 98.3 6.9E-07 1.5E-11 69.3 4.3 39 22-60 729-767 (774)
15 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 98.3 7.2E-07 1.6E-11 58.9 3.8 33 23-55 251-283 (284)
16 cd05052 PTKc_Abl Catalytic dom 98.3 1.4E-06 3E-11 57.2 5.0 42 9-55 221-262 (263)
17 cd05102 PTKc_VEGFR3 Catalytic 98.3 1.2E-06 2.6E-11 59.6 4.8 36 23-58 302-337 (338)
18 cd05148 PTKc_Srm_Brk Catalytic 98.3 1.1E-06 2.4E-11 57.2 4.1 43 8-55 219-261 (261)
19 cd05058 PTKc_Met_Ron Catalytic 98.3 1.5E-06 3.3E-11 56.6 4.7 35 23-57 227-261 (262)
20 cd08228 STKc_Nek6 Catalytic do 98.3 1.2E-06 2.6E-11 57.2 4.2 34 23-56 233-266 (267)
21 cd05075 PTKc_Axl Catalytic dom 98.3 1.8E-06 4E-11 56.5 4.9 33 23-55 239-271 (272)
22 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.2 1.8E-06 3.8E-11 57.2 4.6 34 23-56 249-282 (283)
23 cd05111 PTK_HER3 Pseudokinase 98.2 2.7E-06 5.8E-11 56.6 4.9 47 7-58 225-271 (279)
24 cd05043 PTK_Ryk Pseudokinase d 98.2 3E-06 6.6E-11 55.9 5.0 36 23-58 244-279 (280)
25 cd05056 PTKc_FAK Catalytic dom 98.2 3.3E-06 7.2E-11 55.4 5.0 46 8-58 223-268 (270)
26 cd05091 PTKc_Ror2 Catalytic do 98.2 1.9E-06 4.2E-11 56.9 3.6 32 23-54 251-282 (283)
27 cd05107 PTKc_PDGFR_beta Cataly 98.2 2.2E-06 4.9E-11 61.2 3.9 44 8-56 357-400 (401)
28 KOG0196|consensus 98.1 2.5E-06 5.4E-11 66.9 3.8 50 6-60 847-896 (996)
29 cd05108 PTKc_EGFR Catalytic do 98.1 4E-06 8.6E-11 56.7 4.3 48 7-59 225-272 (316)
30 cd05114 PTKc_Tec_Rlk Catalytic 98.1 3.6E-06 7.8E-11 54.9 3.9 30 23-52 226-255 (256)
31 cd05053 PTKc_FGFR Catalytic do 98.1 5.7E-06 1.2E-10 54.9 4.9 34 23-56 259-292 (293)
32 KOG0194|consensus 98.1 3.8E-06 8.3E-11 62.4 4.3 51 5-60 375-425 (474)
33 cd08224 STKc_Nek6_Nek7 Catalyt 98.1 5.2E-06 1.1E-10 53.9 4.5 34 23-56 233-266 (267)
34 cd05045 PTKc_RET Catalytic dom 98.1 5.9E-06 1.3E-10 55.0 4.8 35 23-57 254-288 (290)
35 cd08229 STKc_Nek7 Catalytic do 98.1 6.3E-06 1.4E-10 53.8 4.7 34 23-56 233-266 (267)
36 cd05035 PTKc_Axl_like Catalyti 98.1 6E-06 1.3E-10 53.8 4.6 33 23-55 240-272 (273)
37 cd05033 PTKc_EphR Catalytic do 98.1 6.5E-06 1.4E-10 53.9 4.8 33 23-55 233-265 (266)
38 cd05089 PTKc_Tie1 Catalytic do 98.1 7.1E-06 1.5E-10 55.0 5.0 46 9-59 234-279 (297)
39 cd05094 PTKc_TrkC Catalytic do 98.1 7.8E-06 1.7E-10 54.5 5.0 36 23-58 250-285 (291)
40 cd05104 PTKc_Kit Catalytic dom 98.1 4.1E-06 8.9E-11 58.7 3.8 32 23-54 342-373 (375)
41 cd05039 PTKc_Csk_like Catalyti 98.1 4.7E-06 1E-10 54.2 3.7 42 9-55 215-256 (256)
42 cd05101 PTKc_FGFR2 Catalytic d 98.1 7.6E-06 1.6E-10 54.9 4.8 36 23-58 264-299 (304)
43 cd05103 PTKc_VEGFR2 Catalytic 98.1 5.8E-06 1.3E-10 56.9 4.3 46 8-58 297-342 (343)
44 cd05082 PTKc_Csk Catalytic dom 98.1 5.4E-06 1.2E-10 54.0 3.9 33 23-55 224-256 (256)
45 cd05105 PTKc_PDGFR_alpha Catal 98.1 4.4E-06 9.5E-11 59.6 3.7 45 8-57 355-399 (400)
46 cd05093 PTKc_TrkB Catalytic do 98.1 8.1E-06 1.7E-10 54.4 4.7 36 23-58 247-282 (288)
47 cd05106 PTKc_CSF-1R Catalytic 98.0 6.3E-06 1.4E-10 57.8 4.1 34 23-56 340-373 (374)
48 cd05098 PTKc_FGFR1 Catalytic d 98.0 8.7E-06 1.9E-10 54.8 4.6 46 8-58 257-302 (307)
49 cd05109 PTKc_HER2 Catalytic do 98.0 9.2E-06 2E-10 53.6 4.4 46 9-59 227-272 (279)
50 cd05038 PTKc_Jak_rpt2 Catalyti 98.0 9.1E-06 2E-10 53.2 4.3 33 23-55 251-283 (284)
51 cd05047 PTKc_Tie Catalytic dom 98.0 1.1E-05 2.3E-10 53.2 4.6 34 23-56 236-269 (270)
52 cd05060 PTKc_Syk_like Catalyti 98.0 8.6E-06 1.9E-10 53.1 4.1 34 23-56 223-256 (257)
53 cd05096 PTKc_DDR1 Catalytic do 98.0 5.2E-06 1.1E-10 55.7 3.1 31 23-53 273-303 (304)
54 cd05069 PTKc_Yes Catalytic dom 98.0 9.9E-06 2.2E-10 53.0 4.3 32 23-54 228-259 (260)
55 cd05067 PTKc_Lck_Blk Catalytic 98.0 8.3E-06 1.8E-10 53.3 3.9 32 23-54 228-259 (260)
56 cd05113 PTKc_Btk_Bmx Catalytic 98.0 9.2E-06 2E-10 53.3 4.0 40 8-52 216-255 (256)
57 cd05100 PTKc_FGFR3 Catalytic d 98.0 1.5E-05 3.2E-10 54.4 5.1 48 8-60 251-298 (334)
58 KOG4278|consensus 98.0 1.1E-05 2.4E-10 62.9 4.8 48 6-58 479-526 (1157)
59 cd05090 PTKc_Ror1 Catalytic do 98.0 8.7E-06 1.9E-10 53.9 3.8 32 23-54 251-282 (283)
60 cd05079 PTKc_Jak1_rpt2 Catalyt 98.0 1.5E-05 3.4E-10 52.8 4.9 33 23-55 251-283 (284)
61 cd05099 PTKc_FGFR4 Catalytic d 98.0 1.9E-05 4.2E-10 53.3 5.4 37 23-59 261-297 (314)
62 cd05070 PTKc_Fyn_Yrk Catalytic 98.0 1.2E-05 2.6E-10 52.5 4.2 32 23-54 228-259 (260)
63 cd05110 PTKc_HER4 Catalytic do 98.0 1.3E-05 2.9E-10 53.9 4.5 46 8-58 226-271 (303)
64 cd05083 PTKc_Chk Catalytic dom 98.0 1.1E-05 2.4E-10 52.5 3.9 32 23-54 222-253 (254)
65 cd05072 PTKc_Lyn Catalytic dom 98.0 1.2E-05 2.6E-10 52.4 4.2 33 23-55 229-261 (261)
66 cd05078 PTK_Jak2_Jak3_rpt1 Pse 98.0 7.5E-06 1.6E-10 53.6 3.2 29 24-52 229-257 (258)
67 cd05092 PTKc_TrkA Catalytic do 98.0 1.1E-05 2.3E-10 53.6 3.8 31 23-53 249-279 (280)
68 cd05068 PTKc_Frk_like Catalyti 98.0 1E-05 2.2E-10 52.8 3.7 33 23-55 229-261 (261)
69 cd05054 PTKc_VEGFR Catalytic d 97.9 1.6E-05 3.5E-10 54.9 4.8 35 23-57 301-335 (337)
70 cd05066 PTKc_EphR_A Catalytic 97.9 2E-05 4.4E-10 51.7 4.7 33 23-55 234-266 (267)
71 cd05087 PTKc_Aatyk1_Aatyk3 Cat 97.9 1.5E-05 3.3E-10 52.3 4.2 30 23-53 239-268 (269)
72 cd05032 PTKc_InsR_like Catalyt 97.9 1.3E-05 2.9E-10 52.5 3.9 40 9-53 237-276 (277)
73 cd05057 PTKc_EGFR_like Catalyt 97.9 2.5E-05 5.4E-10 51.6 5.2 38 23-60 236-273 (279)
74 cd05049 PTKc_Trk Catalytic dom 97.9 1.6E-05 3.4E-10 52.2 4.1 31 23-53 249-279 (280)
75 cd05044 PTKc_c-ros Catalytic d 97.9 1.8E-05 3.8E-10 51.7 4.2 31 23-53 238-268 (269)
76 KOG0199|consensus 97.9 1.6E-05 3.5E-10 62.3 4.6 41 7-52 329-369 (1039)
77 cd05050 PTKc_Musk Catalytic do 97.9 1.9E-05 4E-10 52.4 4.2 31 23-53 257-287 (288)
78 cd05074 PTKc_Tyro3 Catalytic d 97.9 2.4E-05 5.2E-10 51.2 4.6 33 23-55 240-272 (273)
79 cd05055 PTKc_PDGFR Catalytic d 97.9 2.7E-05 5.8E-10 52.6 4.8 33 23-55 269-301 (302)
80 KOG1023|consensus 97.9 1.3E-05 2.9E-10 59.7 3.3 47 10-59 182-228 (484)
81 cd05095 PTKc_DDR2 Catalytic do 97.9 1.5E-05 3.3E-10 53.2 3.3 31 23-53 265-295 (296)
82 cd05086 PTKc_Aatyk2 Catalytic 97.9 2.2E-05 4.7E-10 51.8 4.0 30 23-53 238-267 (268)
83 cd05085 PTKc_Fer Catalytic dom 97.9 2.9E-05 6.2E-10 50.2 4.4 40 9-53 210-249 (250)
84 cd05084 PTKc_Fes Catalytic dom 97.8 2.7E-05 5.9E-10 50.5 4.2 31 23-53 221-251 (252)
85 cd05065 PTKc_EphR_B Catalytic 97.8 3.1E-05 6.6E-10 50.8 4.5 33 23-55 236-268 (269)
86 cd05063 PTKc_EphR_A2 Catalytic 97.8 4.1E-05 8.9E-10 50.1 4.9 33 23-55 235-267 (268)
87 KOG1024|consensus 97.8 2.8E-05 6.1E-10 57.8 4.5 49 7-60 512-560 (563)
88 cd05034 PTKc_Src_like Catalyti 97.8 2.9E-05 6.3E-10 50.5 4.2 32 23-54 229-260 (261)
89 cd05036 PTKc_ALK_LTK Catalytic 97.8 2.4E-05 5.1E-10 51.8 3.8 31 23-53 246-276 (277)
90 cd05059 PTKc_Tec_like Catalyti 97.8 2.7E-05 6E-10 50.8 3.8 39 9-52 217-255 (256)
91 cd05112 PTKc_Itk Catalytic dom 97.8 3.7E-05 8.1E-10 49.8 4.3 30 23-52 226-255 (256)
92 cd08219 STKc_Nek3 Catalytic do 97.8 2.8E-05 6E-10 50.5 3.6 38 9-51 215-252 (255)
93 cd05088 PTKc_Tie2 Catalytic do 97.8 5.3E-05 1.2E-09 51.1 4.9 36 23-58 248-283 (303)
94 cd08528 STKc_Nek10 Catalytic d 97.8 4E-05 8.7E-10 50.1 4.1 31 23-53 238-268 (269)
95 cd05071 PTKc_Src Catalytic dom 97.8 5.4E-05 1.2E-09 49.7 4.7 34 23-56 228-261 (262)
96 cd05041 PTKc_Fes_like Catalyti 97.7 4.1E-05 9E-10 49.5 3.9 31 23-53 220-250 (251)
97 cd05076 PTK_Tyk2_rpt1 Pseudoki 97.7 2.4E-05 5.2E-10 52.1 2.7 30 24-53 245-274 (274)
98 cd08529 STKc_FA2-like Catalyti 97.7 4.1E-05 8.9E-10 49.4 3.7 37 9-50 216-252 (256)
99 cd00192 PTKc Catalytic domain 97.7 4.5E-05 9.7E-10 48.9 3.7 39 9-52 223-261 (262)
100 cd05097 PTKc_DDR_like Catalyti 97.7 3.6E-05 7.8E-10 51.4 3.4 31 23-53 264-294 (295)
101 cd05051 PTKc_DDR Catalytic dom 97.7 2.9E-05 6.3E-10 51.4 2.7 31 23-53 265-295 (296)
102 cd05077 PTK_Jak1_rpt1 Pseudoki 97.7 3.7E-05 7.9E-10 50.8 3.1 30 23-52 232-261 (262)
103 cd05073 PTKc_Hck Catalytic dom 97.7 7.3E-05 1.6E-09 48.9 4.3 33 23-55 228-260 (260)
104 smart00219 TyrKc Tyrosine kina 97.7 4.8E-05 1E-09 48.9 3.3 40 8-52 219-258 (258)
105 cd05062 PTKc_IGF-1R Catalytic 97.6 5.8E-05 1.3E-09 49.8 3.5 31 23-53 246-276 (277)
106 smart00750 KIND kinase non-cat 97.6 8.6E-05 1.9E-09 46.0 4.0 32 26-57 140-171 (176)
107 cd06628 STKc_MAPKKK_Byr2_like 97.6 7.3E-05 1.6E-09 48.7 3.5 37 9-50 227-263 (267)
108 cd06624 STKc_ASK Catalytic dom 97.6 8.3E-05 1.8E-09 48.7 3.7 28 23-50 237-264 (268)
109 cd05037 PTK_Jak_rpt1 Pseudokin 97.6 5.1E-05 1.1E-09 49.1 2.6 29 25-53 231-259 (259)
110 cd05061 PTKc_InsR Catalytic do 97.6 0.00012 2.6E-09 48.7 4.4 34 23-56 246-279 (288)
111 cd05042 PTKc_Aatyk Catalytic d 97.6 0.00012 2.7E-09 47.9 4.3 31 22-53 238-268 (269)
112 cd05040 PTKc_Ack_like Catalyti 97.6 0.00015 3.2E-09 47.1 4.4 31 23-53 226-256 (257)
113 cd06646 STKc_MAP4K5 Catalytic 97.6 7.3E-05 1.6E-09 48.9 2.9 29 23-51 237-265 (267)
114 KOG0193|consensus 97.6 0.00015 3.2E-09 55.7 5.0 41 22-62 620-660 (678)
115 cd08218 STKc_Nek1 Catalytic do 97.5 0.00011 2.3E-09 47.7 3.5 37 9-50 216-252 (256)
116 cd05046 PTK_CCK4 Pseudokinase 97.5 8.6E-05 1.9E-09 48.7 3.0 32 22-53 243-274 (275)
117 cd08220 STKc_Nek8 Catalytic do 97.5 0.00012 2.7E-09 47.2 3.5 28 23-50 225-252 (256)
118 cd06649 PKc_MEK2 Catalytic dom 97.5 0.00015 3.2E-09 49.7 3.9 28 23-50 273-300 (331)
119 cd06605 PKc_MAPKK Catalytic do 97.5 0.00015 3.2E-09 47.1 3.7 28 23-50 229-256 (265)
120 cd06625 STKc_MEKK3_like Cataly 97.5 0.00014 3E-09 47.2 3.5 36 10-50 224-259 (263)
121 cd06640 STKc_MST4 Catalytic do 97.5 0.00016 3.5E-09 47.8 3.8 29 23-51 225-253 (277)
122 KOG0195|consensus 97.5 8.7E-05 1.9E-09 53.5 2.6 47 5-56 401-447 (448)
123 PLN00113 leucine-rich repeat r 97.5 0.00015 3.2E-09 56.0 4.0 35 24-58 920-954 (968)
124 cd06616 PKc_MKK4 Catalytic dom 97.4 0.00019 4.2E-09 47.4 3.8 29 22-50 238-266 (288)
125 cd06636 STKc_MAP4K4_6 Catalyti 97.4 0.00015 3.3E-09 47.8 3.3 29 22-50 250-278 (282)
126 KOG4721|consensus 97.4 0.00019 4.2E-09 55.6 4.3 42 7-53 325-366 (904)
127 cd08225 STKc_Nek5 Catalytic do 97.4 0.00017 3.8E-09 46.5 3.5 28 23-50 226-253 (257)
128 cd08222 STKc_Nek11 Catalytic d 97.4 0.00022 4.8E-09 46.4 3.6 37 9-50 220-256 (260)
129 cd06631 STKc_YSK4 Catalytic do 97.4 0.00024 5.3E-09 46.3 3.7 37 9-50 225-261 (265)
130 cd06629 STKc_MAPKKK_Bck1_like 97.4 0.00025 5.5E-09 46.4 3.7 42 8-50 227-268 (272)
131 cd06642 STKc_STK25-YSK1 Cataly 97.4 0.0003 6.5E-09 46.4 4.0 28 23-50 225-252 (277)
132 cd08223 STKc_Nek4 Catalytic do 97.3 0.00029 6.2E-09 45.6 3.6 28 23-50 226-253 (257)
133 cd06632 STKc_MEKK1_plant Catal 97.3 0.00027 5.8E-09 45.5 3.5 37 9-50 218-254 (258)
134 cd06610 STKc_OSR1_SPAK Catalyt 97.3 0.00037 8E-09 45.1 4.1 29 22-50 235-263 (267)
135 cd06626 STKc_MEKK4 Catalytic d 97.3 0.00036 7.8E-09 45.2 3.9 39 9-50 222-260 (264)
136 cd06637 STKc_TNIK Catalytic do 97.3 0.00033 7.2E-09 45.7 3.5 28 23-50 241-268 (272)
137 cd06620 PKc_MAPKK_Byr1_like Ca 97.3 0.00028 6E-09 46.8 3.2 30 23-52 238-267 (284)
138 cd08215 STKc_Nek Catalytic dom 97.3 0.00036 7.8E-09 44.6 3.6 28 23-50 227-254 (258)
139 cd07846 STKc_CDKL2_3 Catalytic 97.3 0.00024 5.1E-09 46.7 2.8 28 23-50 255-282 (286)
140 cd06638 STKc_myosinIIIA Cataly 97.3 0.00028 6E-09 46.5 3.1 28 24-51 256-283 (286)
141 cd06607 STKc_TAO Catalytic dom 97.3 0.00028 6E-09 47.4 3.1 28 23-50 239-266 (307)
142 cd08217 STKc_Nek2 Catalytic do 97.3 0.00041 8.9E-09 44.6 3.7 28 23-50 234-261 (265)
143 cd06650 PKc_MEK1 Catalytic dom 97.2 0.00039 8.5E-09 47.7 3.8 28 23-50 271-298 (333)
144 cd06615 PKc_MEK Catalytic doma 97.2 0.00033 7.1E-09 47.3 3.3 29 23-51 259-287 (308)
145 cd06641 STKc_MST3 Catalytic do 97.2 0.00044 9.6E-09 45.6 3.9 28 23-50 225-252 (277)
146 cd06917 STKc_NAK1_like Catalyt 97.2 0.00042 9.1E-09 45.5 3.7 28 23-50 227-254 (277)
147 cd06617 PKc_MKK3_6 Catalytic d 97.2 0.00035 7.5E-09 45.9 3.1 28 23-50 233-260 (283)
148 PLN00034 mitogen-activated pro 97.2 0.00039 8.3E-09 48.0 3.5 28 23-50 300-327 (353)
149 cd06622 PKc_MAPKK_PBS2_like Ca 97.2 0.00046 1E-08 45.6 3.6 28 23-50 234-261 (286)
150 cd06612 STKc_MST1_2 Catalytic 97.2 0.00025 5.4E-09 45.7 2.3 28 23-50 225-252 (256)
151 cd06608 STKc_myosinIII_like Ca 97.2 0.00027 5.9E-09 45.8 2.4 28 23-50 244-271 (275)
152 cd06613 STKc_MAP4K3_like Catal 97.2 0.00032 6.8E-09 45.4 2.6 28 23-50 232-259 (262)
153 cd08221 STKc_Nek9 Catalytic do 97.2 0.00046 1E-08 44.7 3.3 29 23-51 225-253 (256)
154 cd06643 STKc_SLK Catalytic dom 97.2 0.00029 6.3E-09 46.5 2.4 28 23-50 234-261 (282)
155 cd06621 PKc_MAPKK_Pek1_like Ca 97.1 0.00051 1.1E-08 45.7 3.4 28 23-50 238-265 (287)
156 cd07833 STKc_CDKL Catalytic do 97.1 0.00029 6.4E-09 46.2 2.2 27 24-50 258-284 (288)
157 cd07861 STKc_CDK1_euk Catalyti 97.1 0.00032 6.9E-09 46.1 2.4 28 23-50 254-281 (285)
158 cd06634 STKc_TAO2 Catalytic do 97.1 0.00068 1.5E-08 45.8 4.0 28 23-50 239-266 (308)
159 cd06609 STKc_MST3_like Catalyt 97.1 0.00057 1.2E-08 44.9 3.5 28 23-50 223-250 (274)
160 cd05118 STKc_CMGC Catalytic do 97.1 0.00044 9.5E-09 45.2 2.9 28 23-50 252-279 (283)
161 cd06651 STKc_MEKK3 Catalytic d 97.1 0.00048 1E-08 45.2 2.9 35 10-50 226-260 (266)
162 cd05122 PKc_STE Catalytic doma 97.1 0.00036 7.9E-09 44.2 2.3 27 24-50 224-250 (253)
163 cd05583 STKc_MSK_N N-terminal 97.1 0.00046 9.9E-09 45.7 2.6 32 23-54 235-266 (288)
164 cd08216 PK_STRAD Pseudokinase 97.1 0.00054 1.2E-08 45.9 3.0 27 24-50 268-294 (314)
165 cd06606 STKc_MAPKKK Catalytic 97.0 0.00091 2E-08 42.6 3.7 37 9-50 220-256 (260)
166 cd08530 STKc_CNK2-like Catalyt 97.0 0.00077 1.7E-08 43.3 3.4 28 23-50 225-252 (256)
167 cd06627 STKc_Cdc7_like Catalyt 97.0 0.00068 1.5E-08 43.4 3.1 28 23-50 223-250 (254)
168 cd07847 STKc_CDKL1_4 Catalytic 97.0 0.00052 1.1E-08 45.0 2.6 28 23-50 255-282 (286)
169 cd07830 STKc_MAK_like Catalyti 97.0 0.00076 1.6E-08 44.3 3.2 27 24-50 253-279 (283)
170 cd06639 STKc_myosinIIIB Cataly 97.0 0.00091 2E-08 44.3 3.5 28 23-50 259-286 (291)
171 cd07838 STKc_CDK4_6_like Catal 97.0 0.00083 1.8E-08 44.0 3.1 27 24-50 257-283 (287)
172 cd08226 PK_STRAD_beta Pseudoki 97.0 0.00086 1.9E-08 45.6 3.3 27 23-49 280-306 (328)
173 smart00220 S_TKc Serine/Threon 97.0 0.0008 1.7E-08 42.2 2.9 28 23-50 213-240 (244)
174 cd07860 STKc_CDK2_3 Catalytic 96.9 0.00078 1.7E-08 44.3 2.8 28 23-50 253-280 (284)
175 PHA02882 putative serine/threo 96.9 0.00083 1.8E-08 45.1 2.9 30 23-52 264-293 (294)
176 cd06644 STKc_STK10_LOK Catalyt 96.9 0.00082 1.8E-08 44.7 2.8 28 23-50 241-268 (292)
177 cd07831 STKc_MOK Catalytic dom 96.9 0.00085 1.8E-08 43.9 2.8 28 23-50 251-278 (282)
178 PTZ00283 serine/threonine prot 96.9 0.0012 2.7E-08 48.4 3.9 37 9-50 260-296 (496)
179 cd06654 STKc_PAK1 Catalytic do 96.9 0.00087 1.9E-08 45.0 2.8 28 23-50 242-269 (296)
180 cd06618 PKc_MKK7 Catalytic dom 96.9 0.00073 1.6E-08 45.1 2.5 28 23-50 245-272 (296)
181 PF00069 Pkinase: Protein kina 96.9 0.00072 1.6E-08 43.6 2.3 27 24-50 230-256 (260)
182 cd06619 PKc_MKK5 Catalytic dom 96.9 0.0011 2.4E-08 43.9 3.2 28 23-50 225-252 (279)
183 cd07841 STKc_CDK7 Catalytic do 96.9 0.0013 2.8E-08 43.6 3.5 28 23-50 254-281 (298)
184 cd07839 STKc_CDK5 Catalytic do 96.9 0.00082 1.8E-08 44.2 2.4 28 23-50 253-280 (284)
185 cd07840 STKc_CDK9_like Catalyt 96.9 0.00099 2.1E-08 43.5 2.7 27 24-50 257-283 (287)
186 cd06647 STKc_PAK_I Catalytic d 96.8 0.00089 1.9E-08 44.9 2.5 28 23-50 241-268 (293)
187 KOG1025|consensus 96.8 0.0023 5.1E-08 51.3 5.0 49 7-60 914-962 (1177)
188 cd06611 STKc_SLK_like Catalyti 96.8 0.00089 1.9E-08 44.1 2.4 28 23-50 234-261 (280)
189 cd08227 PK_STRAD_alpha Pseudok 96.8 0.0009 1.9E-08 45.5 2.4 27 24-50 280-306 (327)
190 cd07835 STKc_CDK1_like Catalyt 96.8 0.00088 1.9E-08 44.1 2.3 28 23-50 252-279 (283)
191 cd06655 STKc_PAK2 Catalytic do 96.8 0.00097 2.1E-08 44.9 2.5 28 23-50 241-268 (296)
192 cd07865 STKc_CDK9 Catalytic do 96.8 0.0011 2.3E-08 44.0 2.6 26 25-50 281-306 (310)
193 cd07864 STKc_CDK12 Catalytic d 96.8 0.001 2.3E-08 44.1 2.6 28 23-50 271-298 (302)
194 cd05579 STKc_MAST_like Catalyt 96.8 0.00058 1.2E-08 43.9 1.3 30 24-53 227-256 (265)
195 cd07843 STKc_CDC2L1 Catalytic 96.8 0.0012 2.6E-08 43.8 2.6 27 24-50 263-289 (293)
196 cd05572 STKc_cGK_PKG Catalytic 96.8 0.0016 3.4E-08 42.4 3.2 37 9-50 210-251 (262)
197 cd07834 STKc_MAPK Catalytic do 96.8 0.001 2.2E-08 45.0 2.3 28 23-50 261-288 (330)
198 cd06623 PKc_MAPKK_plant_like C 96.8 0.0014 3E-08 42.3 2.8 28 23-50 228-255 (264)
199 cd06614 STKc_PAK Catalytic dom 96.7 0.0013 2.8E-08 43.5 2.6 28 23-50 242-269 (286)
200 cd06630 STKc_MEKK1 Catalytic d 96.7 0.0019 4E-08 42.0 3.2 28 23-50 236-263 (268)
201 cd06635 STKc_TAO1 Catalytic do 96.7 0.0023 5E-08 43.3 3.8 31 23-53 249-279 (317)
202 cd07859 STKc_TDY_MAPK_plant Ca 96.7 0.0015 3.2E-08 44.1 2.6 28 23-50 262-289 (338)
203 cd07829 STKc_CDK_like Catalyti 96.7 0.0018 3.8E-08 42.3 2.9 27 24-50 252-278 (282)
204 KOG1094|consensus 96.6 0.0028 6.2E-08 49.2 4.1 33 23-55 772-804 (807)
205 cd07852 STKc_MAPK15 Catalytic 96.6 0.002 4.4E-08 43.9 2.8 29 23-51 267-295 (337)
206 cd06645 STKc_MAP4K3 Catalytic 96.6 0.0024 5.1E-08 41.7 3.0 28 23-50 237-264 (267)
207 cd06648 STKc_PAK_II Catalytic 96.6 0.0017 3.7E-08 43.3 2.2 28 23-50 241-268 (285)
208 cd07837 STKc_CdkB_plant Cataly 96.5 0.0019 4.2E-08 42.7 2.4 28 23-50 263-290 (295)
209 cd05578 STKc_Yank1 Catalytic d 96.5 0.002 4.4E-08 41.8 2.4 32 10-46 217-248 (258)
210 cd06656 STKc_PAK3 Catalytic do 96.5 0.002 4.3E-08 43.3 2.4 28 23-50 241-268 (297)
211 cd07858 STKc_TEY_MAPK_plant Ca 96.5 0.0022 4.7E-08 43.9 2.4 29 23-51 263-291 (337)
212 cd05123 STKc_AGC Catalytic dom 96.5 0.0027 5.9E-08 40.7 2.7 25 23-47 216-240 (250)
213 cd07849 STKc_ERK1_2_like Catal 96.5 0.0021 4.5E-08 43.9 2.2 28 24-51 265-292 (336)
214 cd05611 STKc_Rim15_like Cataly 96.4 0.0013 2.7E-08 42.8 1.1 31 23-53 220-250 (260)
215 cd06633 STKc_TAO3 Catalytic do 96.4 0.0032 6.9E-08 42.6 3.1 28 23-50 245-272 (313)
216 cd07855 STKc_ERK5 Catalytic do 96.4 0.0029 6.3E-08 43.2 2.5 28 23-50 266-293 (334)
217 cd07870 STKc_PFTAIRE2 Catalyti 96.4 0.0042 9.2E-08 41.1 3.2 27 23-49 260-286 (291)
218 cd07851 STKc_p38 Catalytic dom 96.4 0.003 6.5E-08 43.4 2.5 27 24-50 271-297 (343)
219 PTZ00267 NIMA-related protein 96.3 0.0046 9.9E-08 44.9 3.6 28 23-50 295-322 (478)
220 cd07862 STKc_CDK6 Catalytic do 96.3 0.0029 6.4E-08 41.8 2.3 28 23-50 259-286 (290)
221 cd07879 STKc_p38delta_MAPK13 C 96.3 0.0031 6.8E-08 43.3 2.4 27 23-49 269-295 (342)
222 PHA03209 serine/threonine kina 96.3 0.0028 6E-08 44.0 2.1 26 24-49 324-349 (357)
223 cd05609 STKc_MAST Catalytic do 96.3 0.0022 4.7E-08 43.1 1.5 32 23-54 242-273 (305)
224 cd06658 STKc_PAK5 Catalytic do 96.3 0.0035 7.6E-08 42.1 2.5 28 23-50 244-271 (292)
225 cd07832 STKc_CCRK Catalytic do 96.3 0.0047 1E-07 40.5 3.0 28 23-50 254-281 (286)
226 cd05581 STKc_PDK1 Catalytic do 96.3 0.0026 5.6E-08 41.4 1.7 27 23-49 245-275 (280)
227 cd07848 STKc_CDKL5 Catalytic d 96.3 0.0042 9.1E-08 41.0 2.8 28 23-50 256-283 (287)
228 cd07842 STKc_CDK8_like Catalyt 96.2 0.0043 9.4E-08 41.3 2.7 27 24-50 286-312 (316)
229 cd07856 STKc_Sty1_Hog1 Catalyt 96.2 0.0043 9.3E-08 42.5 2.7 28 23-50 260-287 (328)
230 cd07836 STKc_Pho85 Catalytic d 96.2 0.0042 9.1E-08 40.7 2.4 27 24-50 254-280 (284)
231 cd00180 PKc Catalytic domain o 96.1 0.0045 9.8E-08 37.5 2.3 27 25-51 188-214 (215)
232 cd06659 STKc_PAK6 Catalytic do 96.1 0.0055 1.2E-07 41.2 2.9 28 23-50 243-270 (297)
233 cd05605 STKc_GRK4_like Catalyt 96.1 0.0038 8.3E-08 41.6 2.0 27 23-49 228-259 (285)
234 cd07854 STKc_MAPK4_6 Catalytic 96.0 0.006 1.3E-07 41.9 2.6 27 23-49 272-298 (342)
235 PTZ00036 glycogen synthase kin 95.9 0.0041 8.8E-08 44.8 1.6 27 23-49 323-349 (440)
236 cd07857 STKc_MPK1 Catalytic do 95.9 0.0084 1.8E-07 40.8 3.1 27 23-49 264-290 (332)
237 cd07876 STKc_JNK2 Catalytic do 95.9 0.0075 1.6E-07 41.6 2.7 27 24-50 288-314 (359)
238 cd06657 STKc_PAK4 Catalytic do 95.9 0.0077 1.7E-07 40.5 2.7 28 23-50 242-269 (292)
239 cd05574 STKc_phototropin_like 95.9 0.01 2.2E-07 39.9 3.2 27 23-49 257-283 (316)
240 cd07850 STKc_JNK Catalytic dom 95.8 0.0089 1.9E-07 41.1 2.7 28 23-50 283-310 (353)
241 cd07874 STKc_JNK3 Catalytic do 95.7 0.0093 2E-07 41.0 2.7 27 24-50 284-310 (355)
242 KOG2345|consensus 95.6 0.022 4.7E-07 40.4 4.2 37 20-56 265-301 (302)
243 cd07863 STKc_CDK4 Catalytic do 95.6 0.012 2.7E-07 38.7 2.8 28 23-50 257-284 (288)
244 cd05570 STKc_PKC Catalytic dom 95.5 0.011 2.3E-07 40.2 2.4 27 23-49 219-250 (318)
245 cd07866 STKc_BUR1 Catalytic do 95.5 0.013 2.8E-07 38.8 2.7 25 25-49 282-306 (311)
246 PLN00009 cyclin-dependent kina 95.5 0.013 2.8E-07 38.9 2.7 28 23-50 256-283 (294)
247 cd05607 STKc_GRK7 Catalytic do 95.5 0.0058 1.3E-07 40.6 0.9 30 23-52 222-251 (277)
248 cd07873 STKc_PCTAIRE1 Catalyti 95.5 0.013 2.7E-07 39.2 2.5 28 23-50 258-285 (301)
249 PTZ00024 cyclin-dependent prot 95.5 0.012 2.6E-07 40.0 2.4 27 24-50 286-312 (335)
250 PHA03207 serine/threonine kina 95.4 0.013 2.9E-07 41.2 2.6 28 23-50 347-374 (392)
251 cd05577 STKc_GRK Catalytic dom 95.4 0.019 4E-07 37.9 3.1 25 23-47 221-245 (277)
252 cd05582 STKc_RSK_N N-terminal 95.4 0.0087 1.9E-07 40.5 1.5 25 23-47 221-245 (318)
253 cd07869 STKc_PFTAIRE1 Catalyti 95.4 0.013 2.9E-07 39.2 2.4 28 23-50 260-287 (303)
254 cd05614 STKc_MSK2_N N-terminal 95.4 0.018 3.9E-07 39.1 3.0 27 23-49 234-265 (332)
255 cd05592 STKc_nPKC_theta_delta 95.3 0.015 3.3E-07 39.6 2.5 36 9-49 210-246 (316)
256 cd07845 STKc_CDK10 Catalytic d 95.3 0.016 3.4E-07 38.9 2.5 27 24-50 263-289 (309)
257 cd07867 STKc_CDC2L6 Catalytic 95.3 0.019 4.1E-07 38.4 2.8 26 25-50 288-313 (317)
258 cd06652 STKc_MEKK2 Catalytic d 95.2 0.023 5E-07 37.0 3.1 26 24-50 235-260 (265)
259 PHA03212 serine/threonine kina 95.2 0.018 3.8E-07 40.9 2.6 28 23-50 348-375 (391)
260 cd07872 STKc_PCTAIRE2 Catalyti 95.2 0.017 3.6E-07 38.9 2.4 28 23-50 258-285 (309)
261 cd07853 STKc_NLK Catalytic dom 95.2 0.018 3.8E-07 40.0 2.6 28 23-50 260-287 (372)
262 cd05630 STKc_GRK6 Catalytic do 95.1 0.012 2.5E-07 39.3 1.5 28 23-50 228-260 (285)
263 cd05585 STKc_YPK1_like Catalyt 95.1 0.012 2.6E-07 39.8 1.6 27 23-49 216-242 (312)
264 cd05580 STKc_PKA Catalytic dom 95.1 0.022 4.8E-07 37.8 2.8 34 11-49 214-252 (290)
265 cd07844 STKc_PCTAIRE_like Cata 95.1 0.022 4.7E-07 37.7 2.7 26 25-50 262-287 (291)
266 cd05631 STKc_GRK4 Catalytic do 95.1 0.014 3.1E-07 38.8 1.8 28 23-50 228-260 (285)
267 KOG1989|consensus 94.9 0.052 1.1E-06 42.7 4.6 37 22-58 278-314 (738)
268 cd07868 STKc_CDK8 Catalytic do 94.8 0.03 6.4E-07 37.6 2.9 26 25-50 288-313 (317)
269 cd05633 STKc_GRK3 Catalytic do 94.8 0.026 5.6E-07 37.5 2.5 28 23-50 222-254 (279)
270 cd05632 STKc_GRK5 Catalytic do 94.8 0.019 4.1E-07 38.2 1.9 28 23-50 228-260 (285)
271 cd05571 STKc_PKB Catalytic dom 94.8 0.029 6.4E-07 38.2 2.8 27 23-49 218-249 (323)
272 cd07878 STKc_p38beta_MAPK11 Ca 94.7 0.029 6.3E-07 38.3 2.6 26 25-50 272-297 (343)
273 cd06653 STKc_MEKK3_like_1 Cata 94.7 0.05 1.1E-06 35.5 3.6 35 9-49 225-259 (264)
274 cd05620 STKc_nPKC_delta Cataly 94.6 0.026 5.7E-07 38.4 2.3 27 23-49 219-246 (316)
275 PTZ00263 protein kinase A cata 94.5 0.036 7.7E-07 37.9 2.7 22 23-44 238-259 (329)
276 PHA03211 serine/threonine kina 94.3 0.04 8.8E-07 40.4 2.7 26 25-50 429-454 (461)
277 KOG0198|consensus 94.2 0.06 1.3E-06 38.3 3.4 37 10-51 240-276 (313)
278 cd05613 STKc_MSK1_N N-terminal 94.2 0.048 1E-06 36.1 2.7 22 23-44 235-256 (290)
279 cd05576 STKc_RPK118_like Catal 94.2 0.038 8.3E-07 35.8 2.2 24 23-46 201-224 (237)
280 cd05612 STKc_PRKX_like Catalyt 94.0 0.051 1.1E-06 36.3 2.6 26 24-49 222-252 (291)
281 cd05618 STKc_aPKC_iota Catalyt 94.0 0.054 1.2E-06 37.1 2.8 23 23-45 228-250 (329)
282 cd05619 STKc_nPKC_theta Cataly 94.0 0.043 9.3E-07 37.4 2.3 27 23-49 219-246 (316)
283 cd07875 STKc_JNK1 Catalytic do 94.0 0.058 1.3E-06 37.2 2.9 26 25-50 292-317 (364)
284 PTZ00284 protein kinase; Provi 94.0 0.053 1.1E-06 39.1 2.8 42 25-66 412-456 (467)
285 PTZ00266 NIMA-related protein 94.0 0.052 1.1E-06 44.0 2.9 27 23-49 267-293 (1021)
286 cd05608 STKc_GRK1 Catalytic do 93.9 0.04 8.7E-07 36.6 1.9 23 23-45 224-246 (280)
287 cd05584 STKc_p70S6K Catalytic 93.9 0.065 1.4E-06 36.5 2.9 28 23-50 223-255 (323)
288 cd05589 STKc_PKN Catalytic dom 93.8 0.071 1.5E-06 36.2 3.1 22 23-44 224-245 (324)
289 cd07877 STKc_p38alpha_MAPK14 C 93.6 0.071 1.5E-06 36.7 2.8 28 23-50 272-299 (345)
290 PHA03390 pk1 serine/threonine- 93.5 0.053 1.1E-06 35.8 1.9 27 23-49 233-260 (267)
291 KOG0201|consensus 93.5 0.15 3.3E-06 38.2 4.4 29 22-50 234-262 (467)
292 cd05600 STKc_Sid2p_Dbf2p Catal 93.3 0.071 1.5E-06 36.3 2.4 28 23-50 229-256 (333)
293 cd05588 STKc_aPKC Catalytic do 93.0 0.1 2.2E-06 35.7 2.8 23 23-45 228-250 (329)
294 cd05595 STKc_PKB_beta Catalyti 93.0 0.072 1.6E-06 36.3 2.0 28 23-50 218-250 (323)
295 cd05601 STKc_CRIK Catalytic do 93.0 0.076 1.7E-06 36.0 2.1 26 23-49 236-261 (330)
296 cd05594 STKc_PKB_alpha Catalyt 93.0 0.09 1.9E-06 35.7 2.5 28 23-50 219-251 (325)
297 cd07871 STKc_PCTAIRE3 Catalyti 92.9 0.11 2.5E-06 34.5 2.9 27 23-49 257-283 (288)
298 cd05593 STKc_PKB_gamma Catalyt 92.8 0.11 2.4E-06 35.5 2.7 28 23-50 218-250 (328)
299 cd05590 STKc_nPKC_eta Catalyti 92.7 0.097 2.1E-06 35.6 2.4 24 23-46 219-242 (320)
300 cd05606 STKc_beta_ARK Catalyti 92.7 0.13 2.8E-06 34.1 2.9 28 23-50 222-254 (278)
301 cd07880 STKc_p38gamma_MAPK12 C 92.6 0.11 2.4E-06 35.7 2.6 27 23-49 270-296 (343)
302 cd05573 STKc_ROCK_NDR_like Cat 92.6 0.095 2.1E-06 35.6 2.1 27 23-50 257-284 (350)
303 cd05587 STKc_cPKC Catalytic do 92.5 0.1 2.2E-06 35.5 2.2 23 23-45 224-246 (324)
304 KOG0582|consensus 92.1 0.14 3E-06 38.7 2.7 28 23-50 265-292 (516)
305 cd05586 STKc_Sck1_like Catalyt 91.1 0.2 4.4E-06 34.0 2.5 23 23-45 221-243 (330)
306 PLN00181 protein SPA1-RELATED; 91.0 0.22 4.7E-06 38.5 2.8 24 26-49 240-263 (793)
307 KOG0579|consensus 90.7 0.16 3.4E-06 40.6 1.8 30 15-49 258-287 (1187)
308 cd05610 STKc_MASTL Catalytic d 90.6 0.21 4.6E-06 38.1 2.4 28 23-50 606-633 (669)
309 KOG0581|consensus 90.5 0.38 8.2E-06 35.2 3.5 38 8-49 296-333 (364)
310 cd05591 STKc_nPKC_epsilon Cata 90.4 0.19 4.2E-06 34.0 1.9 27 23-49 219-252 (321)
311 cd05617 STKc_aPKC_zeta Catalyt 90.0 0.31 6.8E-06 33.2 2.7 23 23-45 226-248 (327)
312 PHA03210 serine/threonine kina 88.8 0.31 6.8E-06 35.8 2.1 28 23-50 426-453 (501)
313 KOG1187|consensus 88.6 0.87 1.9E-05 32.6 4.2 35 23-57 320-354 (361)
314 KOG0589|consensus 88.3 0.59 1.3E-05 34.8 3.2 35 12-51 224-258 (426)
315 PRK13184 pknD serine/threonine 88.2 0.62 1.3E-05 37.7 3.4 36 23-58 257-293 (932)
316 KOG0596|consensus 87.8 0.46 9.9E-06 37.0 2.4 24 26-49 602-625 (677)
317 cd05575 STKc_SGK Catalytic dom 87.5 0.52 1.1E-05 32.0 2.4 24 23-46 219-242 (323)
318 KOG0661|consensus 86.9 0.64 1.4E-05 35.5 2.7 28 23-50 263-290 (538)
319 cd05602 STKc_SGK1 Catalytic do 86.8 0.24 5.2E-06 33.6 0.4 26 23-48 219-244 (325)
320 PTZ00426 cAMP-dependent protei 85.0 0.67 1.5E-05 32.1 1.9 27 24-50 252-283 (340)
321 cd05603 STKc_SGK2 Catalytic do 84.1 0.8 1.7E-05 31.0 2.0 24 23-46 219-242 (321)
322 KOG4645|consensus 83.7 0.73 1.6E-05 38.9 1.9 40 6-50 1454-1493(1509)
323 cd05616 STKc_cPKC_beta Catalyt 83.3 1 2.2E-05 30.6 2.2 23 23-45 224-246 (323)
324 PLN03225 Serine/threonine-prot 82.1 1.4 3E-05 33.3 2.7 24 27-50 426-449 (566)
325 cd05615 STKc_cPKC_alpha Cataly 80.6 1.5 3.1E-05 29.9 2.2 23 23-45 224-246 (323)
326 cd00059 FH Forkhead (FH), also 80.1 4 8.8E-05 23.4 3.7 29 27-55 6-34 (78)
327 KOG0591|consensus 78.6 2.4 5.2E-05 30.9 2.8 34 8-45 242-275 (375)
328 KOG4279|consensus 78.2 2.4 5.1E-05 34.6 2.9 38 7-49 793-830 (1226)
329 KOG0578|consensus 77.5 3 6.4E-05 32.2 3.2 40 7-49 482-521 (550)
330 cd05604 STKc_SGK3 Catalytic do 75.9 1 2.2E-05 30.6 0.3 24 23-46 219-242 (325)
331 smart00339 FH FORKHEAD. FORKHE 74.8 6.8 0.00015 22.9 3.7 30 27-56 6-35 (89)
332 KOG1035|consensus 74.2 2.7 5.8E-05 35.4 2.3 46 2-49 820-869 (1351)
333 PF14756 Pdase_C33_assoc: Pept 74.1 9.2 0.0002 24.3 4.3 34 25-58 76-110 (147)
334 KOG0671|consensus 73.8 3.5 7.7E-05 30.7 2.7 29 21-49 376-404 (415)
335 cd05626 STKc_LATS2 Catalytic d 73.8 5.1 0.00011 27.9 3.4 28 23-50 275-304 (381)
336 KOG1027|consensus 69.7 6.8 0.00015 31.9 3.6 35 26-60 742-785 (903)
337 PF00250 Fork_head: Fork head 69.0 7.1 0.00015 23.1 2.9 29 27-55 6-34 (96)
338 KOG0575|consensus 69.0 4.8 0.0001 31.3 2.6 25 25-49 243-267 (592)
339 KOG0615|consensus 68.7 5.9 0.00013 30.0 2.9 39 9-49 397-435 (475)
340 cd05596 STKc_ROCK Catalytic do 66.8 5.3 0.00012 27.9 2.3 28 23-50 274-303 (370)
341 KOG0603|consensus 66.4 5.8 0.00013 31.0 2.6 27 23-49 535-561 (612)
342 KOG0593|consensus 65.4 7.9 0.00017 28.6 3.0 27 23-49 256-282 (396)
343 KOG0583|consensus 63.2 13 0.00029 26.7 3.8 42 11-57 239-280 (370)
344 COG3084 Uncharacterized protei 62.6 16 0.00035 21.5 3.4 33 23-60 5-37 (88)
345 KOG0599|consensus 62.6 6.2 0.00013 28.9 2.0 32 16-49 250-281 (411)
346 cd05599 STKc_NDR_like Catalyti 59.4 12 0.00025 25.7 2.9 27 23-50 266-295 (364)
347 cd05624 STKc_MRCK_beta Catalyt 56.3 16 0.00035 24.8 3.2 40 9-50 224-265 (331)
348 KOG0659|consensus 55.8 11 0.00023 27.3 2.2 28 23-50 253-280 (318)
349 KOG4158|consensus 53.6 19 0.00041 27.7 3.3 40 8-52 472-511 (598)
350 cd05628 STKc_NDR1 Catalytic do 52.8 19 0.00041 24.8 3.1 28 23-50 263-292 (363)
351 KOG0592|consensus 51.5 20 0.00044 28.0 3.2 28 23-50 310-337 (604)
352 cd05623 STKc_MRCK_alpha Cataly 49.8 24 0.00051 24.0 3.2 41 9-51 224-266 (332)
353 KOG0033|consensus 49.3 17 0.00036 26.4 2.3 31 17-49 235-265 (355)
354 KOG0032|consensus 47.6 27 0.00058 25.4 3.3 28 23-50 265-292 (382)
355 cd05598 STKc_LATS Catalytic do 47.0 14 0.00031 25.5 1.7 26 23-49 271-299 (376)
356 KOG0667|consensus 46.9 18 0.0004 28.2 2.4 27 23-49 474-500 (586)
357 PF11852 DUF3372: Domain of un 44.4 23 0.00051 23.3 2.3 40 14-58 11-50 (168)
358 cd05597 STKc_DMPK_like Catalyt 42.9 41 0.0009 22.8 3.5 28 23-50 236-265 (331)
359 COG4248 Uncharacterized protei 42.2 81 0.0017 24.7 5.1 48 15-62 258-307 (637)
360 PF06288 DUF1040: Protein of u 40.3 38 0.00082 20.1 2.6 30 24-58 6-35 (86)
361 PF08769 Spo0A_C: Sporulation 39.6 57 0.0012 19.6 3.4 32 23-54 57-103 (106)
362 COG1490 Dtd D-Tyr-tRNAtyr deac 38.2 37 0.0008 22.0 2.5 29 6-34 85-113 (145)
363 PRK05273 D-tyrosyl-tRNA(Tyr) d 37.3 33 0.00071 22.1 2.2 29 6-34 85-113 (147)
364 KOG0584|consensus 36.9 36 0.00078 26.9 2.6 25 25-50 271-295 (632)
365 cd05621 STKc_ROCK2 Catalytic d 36.8 54 0.0012 22.9 3.4 28 23-50 274-303 (370)
366 PF04433 SWIRM: SWIRM domain; 36.8 20 0.00043 20.3 1.0 30 24-53 35-64 (86)
367 PTZ00120 D-tyrosyl-tRNA(Tyr) d 36.8 33 0.00071 22.3 2.1 31 6-36 85-115 (154)
368 PF13220 DUF4028: Protein of u 35.9 42 0.00091 18.5 2.2 21 38-58 37-57 (65)
369 TIGR00256 D-tyrosyl-tRNA(Tyr) 35.6 37 0.0008 21.8 2.2 29 6-34 85-113 (145)
370 PF00718 Polyoma_coat: Polyoma 35.5 12 0.00026 26.8 -0.0 9 33-41 185-193 (297)
371 PF05136 Phage_portal_2: Phage 35.4 63 0.0014 23.0 3.6 48 5-53 53-107 (355)
372 KOG0577|consensus 33.4 65 0.0014 26.2 3.6 38 8-49 239-276 (948)
373 KOG0660|consensus 32.9 33 0.00071 25.3 1.8 27 23-49 282-308 (359)
374 KOG0983|consensus 32.6 65 0.0014 23.7 3.2 39 8-49 309-347 (391)
375 PHA02614 Major capsid protein 32.1 16 0.00035 26.8 0.2 9 33-41 203-211 (363)
376 COG0510 ycfN Thiamine kinase a 31.4 64 0.0014 22.2 3.0 41 25-65 111-151 (269)
377 PF14611 SLS: Mitochondrial in 31.1 31 0.00067 22.5 1.3 18 26-43 5-22 (210)
378 cd05625 STKc_LATS1 Catalytic d 30.3 62 0.0013 22.4 2.8 26 23-49 275-303 (382)
379 cd00563 Dtyr_deacylase D-Tyros 30.0 49 0.0011 21.3 2.1 28 7-34 86-113 (145)
380 PF08247 ENOD40: ENOD40 protei 29.9 8.2 0.00018 14.9 -0.9 8 31-38 1-8 (12)
381 KOG0030|consensus 29.7 25 0.00054 22.9 0.7 28 41-68 64-91 (152)
382 cd00383 trans_reg_C Effector d 29.4 1E+02 0.0023 16.8 3.6 32 27-60 45-76 (95)
383 smart00054 EFh EF-hand, calciu 28.9 50 0.0011 12.9 2.7 19 36-54 10-28 (29)
384 PF08976 DUF1880: Domain of un 28.9 19 0.0004 22.6 0.0 25 12-36 94-118 (118)
385 PRK12482 flagellar motor prote 28.9 57 0.0012 23.1 2.4 20 38-57 266-285 (287)
386 KOG0658|consensus 28.4 54 0.0012 24.3 2.3 28 22-49 277-304 (364)
387 PF07910 Peptidase_C78: Peptid 25.6 59 0.0013 22.0 2.0 21 22-42 55-77 (218)
388 KOG0574|consensus 25.6 24 0.00051 26.3 0.1 27 24-50 256-282 (502)
389 KOG1167|consensus 24.7 68 0.0015 24.2 2.3 27 23-49 353-379 (418)
390 PF04458 DUF505: Protein of un 24.6 1.1E+02 0.0024 24.1 3.5 28 25-52 290-320 (591)
391 TIGR01204 bioW 6-carboxyhexano 23.4 32 0.00069 23.9 0.4 9 33-41 171-179 (232)
392 PF00486 Trans_reg_C: Transcri 23.3 1.3E+02 0.0028 15.8 3.9 32 27-60 27-58 (77)
393 PF03744 BioW: 6-carboxyhexano 23.2 33 0.00071 23.9 0.4 8 33-40 178-185 (239)
394 COG3327 PaaX Phenylacetic acid 22.6 45 0.00099 23.8 1.0 17 24-40 164-180 (291)
395 KOG0484|consensus 22.4 51 0.0011 20.6 1.1 19 50-68 27-45 (125)
396 cd06397 PB1_UP1 Uncharacterize 22.4 58 0.0013 19.2 1.3 25 42-66 19-46 (82)
397 PRK01322 6-carboxyhexanoate--C 22.2 35 0.00076 23.8 0.4 10 32-41 177-186 (242)
398 COG4064 MtrG Tetrahydromethano 21.7 66 0.0014 18.5 1.4 19 44-62 16-34 (75)
399 smart00862 Trans_reg_C Transcr 21.4 1.4E+02 0.0031 15.6 3.7 30 27-56 27-58 (78)
400 KOG0588|consensus 21.2 1E+02 0.0022 25.0 2.8 28 23-50 235-262 (786)
401 COG3382 Solo B3/4 domain (OB-f 21.2 2E+02 0.0044 19.9 3.9 35 19-54 58-93 (229)
402 KOG0585|consensus 21.2 60 0.0013 25.3 1.4 30 23-52 344-373 (576)
403 PF14788 EF-hand_10: EF hand; 21.1 51 0.0011 17.6 0.8 16 42-57 1-16 (51)
404 KOG0580|consensus 21.1 1.4E+02 0.0031 21.3 3.2 35 11-50 238-272 (281)
405 cd06395 PB1_Map2k5 PB1 domain 20.7 1.2E+02 0.0026 18.0 2.4 32 35-66 15-48 (91)
406 smart00707 RPEL Repeat in Dros 20.6 65 0.0014 14.9 1.0 11 40-50 8-18 (26)
407 cd06403 PB1_Par6 The PB1 domai 20.5 1E+02 0.0022 18.1 2.0 33 35-67 14-49 (80)
408 PF13206 VSG_B: Trypanosomal V 20.3 1.6E+02 0.0034 20.3 3.3 33 22-55 235-267 (351)
409 cd05622 STKc_ROCK1 Catalytic d 20.2 1.5E+02 0.0032 20.7 3.2 27 23-50 274-303 (371)
410 PF02526 GBP_repeat: Glycophor 20.0 27 0.00058 17.4 -0.4 24 29-53 8-31 (38)
No 1
>KOG2052|consensus
Probab=99.70 E-value=1.2e-17 Score=122.24 Aligned_cols=62 Identities=53% Similarity=0.978 Sum_probs=58.8
Q ss_pred CceeeecCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcccC
Q psy10024 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQAV 62 (69)
Q Consensus 1 M~~~Vv~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~~~ 62 (69)
|++|||.+++||.||+.|.+++.+..+.+||++||++||.+|+||.+|+|+|.++.+..+++
T Consensus 449 MrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~ek~ 510 (513)
T KOG2052|consen 449 MRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSDEKI 510 (513)
T ss_pred HhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcChhhh
Confidence 89999999999999999999999999999999999999999999999999999998765544
No 2
>KOG3653|consensus
Probab=99.49 E-value=1.2e-14 Score=107.24 Aligned_cols=60 Identities=27% Similarity=0.544 Sum_probs=56.9
Q ss_pred CceeeecCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcc
Q psy10024 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60 (69)
Q Consensus 1 M~~~Vv~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~ 60 (69)
|+.+||.++.||.||..|..|.....|.++|++|||+||++|+||.++.+|+..+....+
T Consensus 449 mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 449 MQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 788999999999999999999999999999999999999999999999999999876654
No 3
>KOG0192|consensus
Probab=99.16 E-value=5.9e-11 Score=84.80 Aligned_cols=52 Identities=27% Similarity=0.514 Sum_probs=46.5
Q ss_pred eecCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhccc
Q psy10024 5 VCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQA 61 (69)
Q Consensus 5 Vv~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~~ 61 (69)
|+..+.||.||.. ++..+..||++||+.||+.||+|.+|...|+.+......
T Consensus 258 v~~~~~Rp~~p~~-----~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 258 VVVGGLRPPIPKE-----CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred HHhcCCCCCCCcc-----CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 5678999999985 667899999999999999999999999999999876553
No 4
>KOG4257|consensus
Probab=98.77 E-value=8.2e-09 Score=79.46 Aligned_cols=49 Identities=18% Similarity=0.326 Sum_probs=44.1
Q ss_pred eecCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 5 VCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 5 Vv~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
+.++|.|++.|++ |++.|.-||..||+.+|..||+|.+|+..|+.+..+
T Consensus 604 ~iEnGeRlP~P~n-----CPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe 652 (974)
T KOG4257|consen 604 HIENGERLPCPPN-----CPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE 652 (974)
T ss_pred EecCCCCCCCCCC-----CChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence 3578999999996 667899999999999999999999999999988764
No 5
>KOG0197|consensus
Probab=98.75 E-value=1.3e-08 Score=75.16 Aligned_cols=48 Identities=21% Similarity=0.344 Sum_probs=42.7
Q ss_pred ecCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 6 CLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 6 v~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
+.+|+|-+=|+. |+..+.+||.+||+.+|+.||||..+...|+.+...
T Consensus 417 le~GyRlp~P~~-----CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 417 LERGYRLPRPEG-----CPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred HhccCcCCCCCC-----CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 568999999986 667899999999999999999999999999988764
No 6
>PHA02988 hypothetical protein; Provisional
Probab=98.66 E-value=4.5e-08 Score=65.81 Aligned_cols=48 Identities=13% Similarity=0.077 Sum_probs=40.3
Q ss_pred eecCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHh
Q psy10024 5 VCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIIL 57 (69)
Q Consensus 5 Vv~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~ 57 (69)
++..+.||++|.. ++..+.++|+.||+.||+.||||.+|.+.|+.++.
T Consensus 234 i~~~~~~~~~~~~-----~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 234 IINKNNSLKLPLD-----CPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHhcCCCCCCCCc-----CcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 3446678887743 55789999999999999999999999999998864
No 7
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=98.58 E-value=3.8e-08 Score=65.09 Aligned_cols=41 Identities=22% Similarity=0.430 Sum_probs=31.7
Q ss_pred cCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 7 LDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 7 ~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
.++.|+.++.. ++..+.++|.+||+.||+.||||.+|.++|
T Consensus 219 ~~~~~~~~~~~-----~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 219 KQGQRLPIPDN-----CPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HTTEETTSBTT-----SBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccccceeccc-----hhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 45677777764 456799999999999999999999999886
No 8
>KOG0200|consensus
Probab=98.57 E-value=9.9e-08 Score=71.65 Aligned_cols=46 Identities=17% Similarity=0.290 Sum_probs=40.3
Q ss_pred ecCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 6 CLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 6 v~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
..+|.|+.-|.. +..++..+|..||+.+|+.||+|.++++.|..+.
T Consensus 535 l~~G~r~~~P~~-----c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 535 LKEGNRMEQPEH-----CSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred HhcCCCCCCCCC-----CCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 357899999986 4457889999999999999999999999999854
No 9
>KOG1095|consensus
Probab=98.47 E-value=1.7e-07 Score=74.36 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=42.1
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcccCC
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQAVS 63 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~~~~ 63 (69)
+|-|-..|.. |+..+.+||.+||.++|+.||+|..|.+++..+.+...-..
T Consensus 919 ~ggRL~~P~~-----CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~ 969 (1025)
T KOG1095|consen 919 EGGRLDPPSY-----CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTI 969 (1025)
T ss_pred hCCccCCCCC-----CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCc
Confidence 3448888876 55678899999999999999999999999998877655433
No 10
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.47 E-value=2e-07 Score=61.01 Aligned_cols=43 Identities=19% Similarity=0.289 Sum_probs=36.2
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
++.+|++|.. ++..+.++|..||+.||+.|||+..|.+.|.+.
T Consensus 213 ~~~~~~~~~~-----~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 213 SGERMECPQR-----CPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCCCCC-----CCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 4556676653 456899999999999999999999999999875
No 11
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=98.45 E-value=3.2e-07 Score=60.49 Aligned_cols=43 Identities=23% Similarity=0.495 Sum_probs=35.5
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
++.++++|.. ++..+.+++.+||+.+|+.|||+.+|.+.|+++
T Consensus 223 ~~~~~~~~~~-----~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 223 DGFRLPAPRN-----CPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCCC-----CCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 4455555543 556899999999999999999999999999875
No 12
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.41 E-value=2.9e-07 Score=60.72 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=30.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
++..+.+|+.+||+.||..|||+.+|.+.|+++
T Consensus 251 ~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 251 CPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 567899999999999999999999999999763
No 13
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.39 E-value=4e-07 Score=59.89 Aligned_cols=45 Identities=16% Similarity=0.315 Sum_probs=37.3
Q ss_pred cCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 7 LDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 7 ~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
..+.++.+|+. +...+.++|.+||..||+.|||+.+|.+.|+.+.
T Consensus 212 ~~~~~~~~~~~-----~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 212 EQGKRLDCPAE-----CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred HCCCCCCCCCC-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 34566776653 4578999999999999999999999999998753
No 14
>KOG1026|consensus
Probab=98.32 E-value=6.9e-07 Score=69.35 Aligned_cols=39 Identities=21% Similarity=0.355 Sum_probs=35.1
Q ss_pred ccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcc
Q psy10024 22 KDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60 (69)
Q Consensus 22 ~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~ 60 (69)
.++..+.+||.+||+.+|..||||.+|..+|+.+.....
T Consensus 729 ~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 729 NCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred CCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 478899999999999999999999999999999876543
No 15
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=98.31 E-value=7.2e-07 Score=58.95 Aligned_cols=33 Identities=24% Similarity=0.480 Sum_probs=30.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
++..+.+|+.+||+.+|+.|||+.+|.+.|+.+
T Consensus 251 ~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 251 CPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 456899999999999999999999999999875
No 16
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=98.30 E-value=1.4e-06 Score=57.16 Aligned_cols=42 Identities=21% Similarity=0.405 Sum_probs=34.8
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
+.++.+|.. ++..+.+++.+||+.||+.||||.++.+.|+.+
T Consensus 221 ~~~~~~~~~-----~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 221 GYRMERPEG-----CPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCC-----CCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 345555543 557899999999999999999999999999875
No 17
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=98.30 E-value=1.2e-06 Score=59.63 Aligned_cols=36 Identities=19% Similarity=0.431 Sum_probs=32.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
....+.+||..||+.||+.|||+.+|.+.|+++..+
T Consensus 302 ~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 302 ATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 456799999999999999999999999999988653
No 18
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=98.28 E-value=1.1e-06 Score=57.22 Aligned_cols=43 Identities=28% Similarity=0.498 Sum_probs=35.0
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
.+.|++.+. ..+..+.++|..||..||+.|||+.+|.+.|+.+
T Consensus 219 ~~~~~~~~~-----~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 219 AGYRMPCPA-----KCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred hCCcCCCCC-----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 345665554 3557899999999999999999999999999863
No 19
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.28 E-value=1.5e-06 Score=56.57 Aligned_cols=35 Identities=26% Similarity=0.471 Sum_probs=31.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHh
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIIL 57 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~ 57 (69)
.+..+.++|..||+.+|+.|||+.+|.+.|+++..
T Consensus 227 ~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 227 CPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 45679999999999999999999999999998764
No 20
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=98.27 E-value=1.2e-06 Score=57.18 Aligned_cols=34 Identities=15% Similarity=0.279 Sum_probs=30.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
....+.++|..||+.+|+.||||.+|.+.|+.+.
T Consensus 233 ~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 233 YSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred cCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 4467999999999999999999999999998864
No 21
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.27 E-value=1.8e-06 Score=56.46 Aligned_cols=33 Identities=18% Similarity=0.412 Sum_probs=30.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
.+..+.++|.+||+.||+.|||+.+|.+.|+++
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 239 CLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 456799999999999999999999999999874
No 22
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.25 E-value=1.8e-06 Score=57.18 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=31.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
.+..+.+++..||+.||+.|||+.+|...|+.+.
T Consensus 249 ~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 249 CPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 4578999999999999999999999999998875
No 23
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.21 E-value=2.7e-06 Score=56.55 Aligned_cols=47 Identities=21% Similarity=0.265 Sum_probs=37.5
Q ss_pred cCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 7 LDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 7 ~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
..+.+++.+.. +...+..++.+||+.||+.|||+.++.+.|..+...
T Consensus 225 ~~~~~~~~~~~-----~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 225 EKGERLAQPQI-----CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HCCCcCCCCCC-----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 34556665543 446789999999999999999999999999887653
No 24
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.21 E-value=3e-06 Score=55.87 Aligned_cols=36 Identities=14% Similarity=0.306 Sum_probs=32.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
++..+.+++..||..||+.|||+.++...|+.+.+.
T Consensus 244 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 244 CPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 456899999999999999999999999999988653
No 25
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=98.19 E-value=3.3e-06 Score=55.41 Aligned_cols=46 Identities=20% Similarity=0.408 Sum_probs=38.1
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
.+.++++|+. ++..+.++|.+||..+|+.|||+.++.+.|.++..+
T Consensus 223 ~~~~~~~~~~-----~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 223 NGERLPMPPN-----CPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred cCCcCCCCCC-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 3456666543 456899999999999999999999999999998654
No 26
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.18 E-value=1.9e-06 Score=56.88 Aligned_cols=32 Identities=25% Similarity=0.483 Sum_probs=29.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIAS 54 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~ 54 (69)
++..+.+++.+||+.+|+.||||.+|..+|++
T Consensus 251 ~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 251 CPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 56789999999999999999999999999874
No 27
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=98.16 E-value=2.2e-06 Score=61.21 Aligned_cols=44 Identities=23% Similarity=0.435 Sum_probs=36.8
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
.+.||.+|.. +...+.+|+..||+.+|+.||||.+|.+.|+++.
T Consensus 357 ~~~~~~~p~~-----~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 357 RGYRMAKPAH-----ASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred cCCCCCCCCC-----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 4567766653 4468999999999999999999999999998864
No 28
>KOG0196|consensus
Probab=98.12 E-value=2.5e-06 Score=66.93 Aligned_cols=50 Identities=20% Similarity=0.325 Sum_probs=42.5
Q ss_pred ecCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcc
Q psy10024 6 CLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60 (69)
Q Consensus 6 v~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~ 60 (69)
+++|+|-+=|- +|+..|-+||.+||+.|=..||+|.+|+..|++|...-+
T Consensus 847 Ie~gyRLPpPm-----DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 847 IEQGYRLPPPM-----DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred HHhccCCCCCC-----CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 35677766664 378899999999999999999999999999999987644
No 29
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=98.12 E-value=4e-06 Score=56.74 Aligned_cols=48 Identities=21% Similarity=0.211 Sum_probs=38.3
Q ss_pred cCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhc
Q psy10024 7 LDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSD 59 (69)
Q Consensus 7 ~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~ 59 (69)
..+.+++.|+. +...+.++|..||..||+.||||.+|...|..+....
T Consensus 225 ~~~~~~~~~~~-----~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 225 EKGERLPQPPI-----CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred hCCCCCCCCCC-----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 34556665543 4467999999999999999999999999999886543
No 30
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=98.12 E-value=3.6e-06 Score=54.86 Aligned_cols=30 Identities=27% Similarity=0.525 Sum_probs=27.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
....+.+++..||+.||+.||||.+|...|
T Consensus 226 ~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 226 ASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 346799999999999999999999998876
No 31
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=98.12 E-value=5.7e-06 Score=54.88 Aligned_cols=34 Identities=21% Similarity=0.563 Sum_probs=30.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
....+.+|+.+||+.||+.|||+.+|.+.|+.+.
T Consensus 259 ~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 259 CTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 4568999999999999999999999999998764
No 32
>KOG0194|consensus
Probab=98.11 E-value=3.8e-06 Score=62.37 Aligned_cols=51 Identities=25% Similarity=0.496 Sum_probs=45.1
Q ss_pred eecCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcc
Q psy10024 5 VCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60 (69)
Q Consensus 5 Vv~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~ 60 (69)
|+.++.|.++|.. .+..+..+|.+||..||+.||||.+|.+.|+.+.....
T Consensus 375 I~~~~~r~~~~~~-----~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 375 IVKNGYRMPIPSK-----TPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred HHhcCccCCCCCC-----CHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 4568999999984 67899999999999999999999999999999887654
No 33
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=98.11 E-value=5.2e-06 Score=53.93 Aligned_cols=34 Identities=12% Similarity=0.198 Sum_probs=30.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
....+.++|..||+.+|+.||||.+|.+.|++++
T Consensus 233 ~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 233 YSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred cCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 4457999999999999999999999999998875
No 34
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.10 E-value=5.9e-06 Score=54.97 Aligned_cols=35 Identities=23% Similarity=0.471 Sum_probs=32.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHh
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIIL 57 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~ 57 (69)
....+.+++..||+.||+.|||+.+|.+.|+++..
T Consensus 254 ~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 254 CSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 45689999999999999999999999999999864
No 35
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=98.10 E-value=6.3e-06 Score=53.79 Aligned_cols=34 Identities=12% Similarity=0.183 Sum_probs=31.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
....+.+++..||+.||+.|||+.+|.+.++++.
T Consensus 233 ~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 233 YSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 5568999999999999999999999999999875
No 36
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.10 E-value=6e-06 Score=53.82 Aligned_cols=33 Identities=24% Similarity=0.566 Sum_probs=30.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
....+.+++.+||+.||++|||+.+|.+.|+++
T Consensus 240 ~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 240 CLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 456899999999999999999999999999875
No 37
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=98.09 E-value=6.5e-06 Score=53.91 Aligned_cols=33 Identities=24% Similarity=0.475 Sum_probs=30.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
.+..+.+++..||+.+|+.|||+.+|.+.|+++
T Consensus 233 ~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 233 CPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 457899999999999999999999999999875
No 38
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=98.09 E-value=7.1e-06 Score=54.96 Aligned_cols=46 Identities=20% Similarity=0.374 Sum_probs=37.0
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhc
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSD 59 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~ 59 (69)
+.++.+|.. +...+.+++..||+.+|..|||+.+|.+.|..+....
T Consensus 234 ~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 234 GYRMEKPRN-----CDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CCCCCCCCC-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 345555543 4567999999999999999999999999999887643
No 39
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.08 E-value=7.8e-06 Score=54.51 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=32.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
.+..+.+++..||+.||++|||+.+|.+.|.++...
T Consensus 250 ~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 250 CPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 456899999999999999999999999999998664
No 40
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=98.08 E-value=4.1e-06 Score=58.67 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=29.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIAS 54 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~ 54 (69)
.+..+.+||..||+.||++||||.+|.+.|++
T Consensus 342 ~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 342 APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 34689999999999999999999999999886
No 41
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=98.07 E-value=4.7e-06 Score=54.22 Aligned_cols=42 Identities=29% Similarity=0.478 Sum_probs=33.7
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
+.++.+|.. .+..+.+++.+||..+|+.|||+.++.+.|+++
T Consensus 215 ~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 215 GYRMEAPEG-----CPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred CCCCCCccC-----CCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 345555532 457899999999999999999999999998753
No 42
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.07 E-value=7.6e-06 Score=54.89 Aligned_cols=36 Identities=19% Similarity=0.492 Sum_probs=32.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
+...+.+++.+||+.+|+.|||+.+|.+.|.++...
T Consensus 264 ~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 264 CTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 557899999999999999999999999999998764
No 43
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=98.06 E-value=5.8e-06 Score=56.90 Aligned_cols=46 Identities=17% Similarity=0.410 Sum_probs=36.8
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
++.++.+|.. ..+.+.++|..||+.||+.|||+.+|.+.|+.+.+.
T Consensus 297 ~~~~~~~~~~-----~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 297 EGTRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred ccCCCCCCCC-----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 4455555542 345799999999999999999999999999988653
No 44
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.06 E-value=5.4e-06 Score=54.04 Aligned_cols=33 Identities=27% Similarity=0.626 Sum_probs=29.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
++..+.+++.+||+.+|+.|||+.++.+.|+.+
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 224 CPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 557899999999999999999999999988753
No 45
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=98.06 E-value=4.4e-06 Score=59.64 Aligned_cols=45 Identities=27% Similarity=0.524 Sum_probs=36.6
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHh
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIIL 57 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~ 57 (69)
.+.+++.+.. .+..+.++|..||+.||+.||||.+|.+.|.++..
T Consensus 355 ~~~~~~~~~~-----~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 355 SGYRMAKPDH-----ATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred cCCCCCCCcc-----CCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 3445555543 45689999999999999999999999999998754
No 46
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=98.06 E-value=8.1e-06 Score=54.37 Aligned_cols=36 Identities=17% Similarity=0.277 Sum_probs=32.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
.+..+.+|+.+||+.||..|||+.+|.+.|+++...
T Consensus 247 ~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 247 CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 456899999999999999999999999999998854
No 47
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=98.04 E-value=6.3e-06 Score=57.79 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=31.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
.+..+.++|..||+.||++|||+.+|.+.|+++.
T Consensus 340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 340 APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 3568999999999999999999999999998864
No 48
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.03 E-value=8.7e-06 Score=54.78 Aligned_cols=46 Identities=22% Similarity=0.452 Sum_probs=37.8
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
.+.++.+|.. ....+.+|+.+||+.+|+.|||+.+|.+.|.++...
T Consensus 257 ~~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 257 EGHRMDKPSN-----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred cCCCCCCCCc-----CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 3455555543 456899999999999999999999999999998765
No 49
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.02 E-value=9.2e-06 Score=53.64 Aligned_cols=46 Identities=20% Similarity=0.240 Sum_probs=37.1
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhc
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSD 59 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~ 59 (69)
+.+++.+.. +...+.+++..||+.||+.|||+.++.+.|..+....
T Consensus 227 ~~~~~~~~~-----~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 227 GERLPQPPI-----CTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CCcCCCCcc-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 445555442 4567999999999999999999999999998886554
No 50
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.01 E-value=9.1e-06 Score=53.21 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=30.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
++..+.+++..||+.+|+.|||+.+|.+.|+++
T Consensus 251 ~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 251 CPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 446899999999999999999999999999875
No 51
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.01 E-value=1.1e-05 Score=53.21 Aligned_cols=34 Identities=21% Similarity=0.450 Sum_probs=30.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
....+.+|+.+||+.||..|||+.+|.+.|.++.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 4568999999999999999999999999998864
No 52
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.01 E-value=8.6e-06 Score=53.10 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=30.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
+...+.++|..||..||+.|||+.+|.+.|.++.
T Consensus 223 ~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 223 CPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 4568999999999999999999999999998764
No 53
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=98.01 E-value=5.2e-06 Score=55.69 Aligned_cols=31 Identities=19% Similarity=0.391 Sum_probs=28.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
++..+.+||..||+.||+.|||+.+|.+.|+
T Consensus 273 ~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 273 CPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 5678999999999999999999999988875
No 54
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.00 E-value=9.9e-06 Score=53.00 Aligned_cols=32 Identities=22% Similarity=0.363 Sum_probs=29.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIAS 54 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~ 54 (69)
.+..+.+++.+||+.||+.|||+.+|.+.|++
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 228 CPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 45789999999999999999999999998875
No 55
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=98.00 E-value=8.3e-06 Score=53.27 Aligned_cols=32 Identities=19% Similarity=0.410 Sum_probs=29.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIAS 54 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~ 54 (69)
.+..+.+++..||+.+|+.|||+.++...|+.
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 228 CPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 45689999999999999999999999998875
No 56
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.99 E-value=9.2e-06 Score=53.26 Aligned_cols=40 Identities=30% Similarity=0.460 Sum_probs=31.9
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
++.|+..+.. ....+.+++..||+.||+.|||+.+|.+.|
T Consensus 216 ~~~~~~~~~~-----~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 216 QGLRLYRPHL-----ASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred cCCCCCCCCC-----CCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 3455555543 346899999999999999999999998765
No 57
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.99 E-value=1.5e-05 Score=54.43 Aligned_cols=48 Identities=25% Similarity=0.477 Sum_probs=38.3
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcc
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~ 60 (69)
.+.++.++.. ....+.+++.+||+.+|+.|||+.+|.+.|.++.....
T Consensus 251 ~~~~~~~~~~-----~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 251 EGHRMDKPAN-----CTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred cCCCCCCCCC-----CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 3455555542 45689999999999999999999999999999875543
No 58
>KOG4278|consensus
Probab=97.98 E-value=1.1e-05 Score=62.93 Aligned_cols=48 Identities=21% Similarity=0.330 Sum_probs=42.1
Q ss_pred ecCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 6 CLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 6 v~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
.++|+|-.-|.. |++.+.+||..||+-+|..||+|.+|-..++.+...
T Consensus 479 LEkgyRM~~PeG-----CPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 479 LEKGYRMDGPEG-----CPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred HhccccccCCCC-----CCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 357888888874 778899999999999999999999999999988655
No 59
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.98 E-value=8.7e-06 Score=53.88 Aligned_cols=32 Identities=25% Similarity=0.431 Sum_probs=29.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIAS 54 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~ 54 (69)
++..+.++|..||+.||+.||++.+|.+.|++
T Consensus 251 ~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 251 CPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 56789999999999999999999999998864
No 60
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.97 E-value=1.5e-05 Score=52.80 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=30.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
+...+.+++.+||+.||+.|||+.+|.+.|+.+
T Consensus 251 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 251 CPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 557899999999999999999999999998875
No 61
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.97 E-value=1.9e-05 Score=53.32 Aligned_cols=37 Identities=27% Similarity=0.554 Sum_probs=33.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhc
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIILSD 59 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~ 59 (69)
++..+.+++.+||+.||+.|||+.++.+.|.++....
T Consensus 261 ~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 261 CTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 4568999999999999999999999999999987653
No 62
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.97 E-value=1.2e-05 Score=52.52 Aligned_cols=32 Identities=19% Similarity=0.337 Sum_probs=29.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIAS 54 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~ 54 (69)
.+..+.+++..||+.||+.|||+.++.+.|+.
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 228 CPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 55789999999999999999999999988864
No 63
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=97.96 E-value=1.3e-05 Score=53.87 Aligned_cols=46 Identities=20% Similarity=0.262 Sum_probs=36.6
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
.+.+++.++. ....+.+++..||..+|+.|||+.++.+.|..+...
T Consensus 226 ~~~~~~~~~~-----~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 226 KGERLPQPPI-----CTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CCCCCCCCCC-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 3445555443 345789999999999999999999999999987654
No 64
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.96 E-value=1.1e-05 Score=52.52 Aligned_cols=32 Identities=19% Similarity=0.437 Sum_probs=28.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIAS 54 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~ 54 (69)
.+..+.+++.+||+.+|+.|||+.+|.+.|++
T Consensus 222 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 222 CPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 55789999999999999999999999988753
No 65
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.96 E-value=1.2e-05 Score=52.39 Aligned_cols=33 Identities=24% Similarity=0.434 Sum_probs=29.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
.+..+.+++..||+.+|+.|||+.+|.+.|+++
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 229 CPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 557899999999999999999999999998763
No 66
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=97.96 E-value=7.5e-06 Score=53.63 Aligned_cols=29 Identities=14% Similarity=0.256 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
...+.+||..||+.||+.|||+.+|.+.|
T Consensus 229 ~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 229 WTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 35799999999999999999999999876
No 67
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.95 E-value=1.1e-05 Score=53.59 Aligned_cols=31 Identities=26% Similarity=0.338 Sum_probs=28.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
++..+.+++..||+.||++|||+.+|.+.|+
T Consensus 249 ~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 249 CPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 5678999999999999999999999999886
No 68
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.95 E-value=1e-05 Score=52.83 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=29.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
.+..+.+++..||+.+|+.|||+.+|.+.|+.+
T Consensus 229 ~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 229 CPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 457899999999999999999999999999753
No 69
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.95 E-value=1.6e-05 Score=54.87 Aligned_cols=35 Identities=20% Similarity=0.455 Sum_probs=31.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHh
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIIL 57 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~ 57 (69)
....+.+++..||+.+|++|||+.+|.+.|+.+..
T Consensus 301 ~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 301 ATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 45689999999999999999999999999998765
No 70
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.93 E-value=2e-05 Score=51.71 Aligned_cols=33 Identities=18% Similarity=0.390 Sum_probs=30.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
++..+.+++..||+.+|+.|||+.+|.+.|+++
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 234 CPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 456899999999999999999999999998874
No 71
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=97.93 E-value=1.5e-05 Score=52.34 Aligned_cols=30 Identities=23% Similarity=0.410 Sum_probs=26.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
....+.++|+.|| .+|+.||||.+|.+.|+
T Consensus 239 ~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 239 LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 4567899999999 58999999999998774
No 72
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=97.92 E-value=1.3e-05 Score=52.49 Aligned_cols=40 Identities=25% Similarity=0.435 Sum_probs=32.9
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
+.++.+|.. .+..+.++|+.||..+|+.|||+.+|...|+
T Consensus 237 ~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 237 GGHLDLPEN-----CPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCCC-----CCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 445566654 3568999999999999999999999998875
No 73
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=97.92 E-value=2.5e-05 Score=51.56 Aligned_cols=38 Identities=21% Similarity=0.323 Sum_probs=33.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcc
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~ 60 (69)
....+.+++.+||..||..|||+.++.++|+++.....
T Consensus 236 ~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 236 CTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 34578999999999999999999999999999866533
No 74
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.92 E-value=1.6e-05 Score=52.24 Aligned_cols=31 Identities=23% Similarity=0.311 Sum_probs=28.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.+..+.+++..||+.||+.|||+.+|.+.|+
T Consensus 249 ~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 249 CPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 5568999999999999999999999999885
No 75
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=97.91 E-value=1.8e-05 Score=51.72 Aligned_cols=31 Identities=26% Similarity=0.533 Sum_probs=28.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.+..+.++|+.||..+|+.|||+.+|.+.|.
T Consensus 238 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 238 CPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred chHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 5578999999999999999999999998875
No 76
>KOG0199|consensus
Probab=97.91 E-value=1.6e-05 Score=62.29 Aligned_cols=41 Identities=24% Similarity=0.380 Sum_probs=35.2
Q ss_pred cCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 7 LDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 7 ~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
.+|.|-+-|+. |.+.+..+|.+||.++|+.||||..|++.+
T Consensus 329 D~~erLpRPk~-----csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 329 DAGERLPRPKY-----CSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred cccccCCCCCC-----ChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 46788877774 778999999999999999999999998544
No 77
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.90 E-value=1.9e-05 Score=52.40 Aligned_cols=31 Identities=19% Similarity=0.477 Sum_probs=28.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.+..+.++|..||+.||+.||||.+|.+.|+
T Consensus 257 ~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 257 CPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 4578999999999999999999999999886
No 78
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=97.89 E-value=2.4e-05 Score=51.18 Aligned_cols=33 Identities=27% Similarity=0.604 Sum_probs=30.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
.+..+.+++.+||+.+|+.|||+.++.+.|+++
T Consensus 240 ~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 240 CLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 456899999999999999999999999999875
No 79
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=97.88 E-value=2.7e-05 Score=52.57 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=30.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
....+.+++..||+.+|+.|||+.++.+.|.++
T Consensus 269 ~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 269 APAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 356899999999999999999999999999874
No 80
>KOG1023|consensus
Probab=97.86 E-value=1.3e-05 Score=59.66 Aligned_cols=47 Identities=21% Similarity=0.412 Sum_probs=38.1
Q ss_pred CCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhc
Q psy10024 10 IRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSD 59 (69)
Q Consensus 10 ~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~ 59 (69)
.||.+.. .+...+.+..++++||.++|+.||++.+|...++.+....
T Consensus 182 ~rP~i~~---~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 182 FRPSIEL---LNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred cCcchhh---hhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 4555543 2356668999999999999999999999999999887754
No 81
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.86 E-value=1.5e-05 Score=53.22 Aligned_cols=31 Identities=29% Similarity=0.489 Sum_probs=28.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
++..+.++|..||+.||+.|||+.+|.+.|+
T Consensus 265 ~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 265 CPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 4578999999999999999999999999886
No 82
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=97.85 E-value=2.2e-05 Score=51.79 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=26.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
....+.++++.|| .+|++||||.+|.+.|.
T Consensus 238 ~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 238 YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 4567899999999 67999999999988774
No 83
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=97.85 E-value=2.9e-05 Score=50.22 Aligned_cols=40 Identities=30% Similarity=0.489 Sum_probs=32.5
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
+.|+.++.. .+..+.+++..||+.+|+.|||+.++.+.|.
T Consensus 210 ~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 210 GYRMSCPQK-----CPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCCCCC-----CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 445555442 5578999999999999999999999998874
No 84
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=97.84 E-value=2.7e-05 Score=50.49 Aligned_cols=31 Identities=19% Similarity=0.451 Sum_probs=28.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.+..+.+++..||+.||++|||+.++.+.|+
T Consensus 221 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 221 CPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 4568999999999999999999999998875
No 85
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.84 E-value=3.1e-05 Score=50.80 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=29.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
++..+.+++..||..+|+.|||+.+|...|+++
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 236 CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 456899999999999999999999999988764
No 86
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.83 E-value=4.1e-05 Score=50.06 Aligned_cols=33 Identities=21% Similarity=0.445 Sum_probs=30.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
.+..+.+++..||..+|+.||++.+|.+.|+++
T Consensus 235 ~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 235 CPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 567899999999999999999999999999875
No 87
>KOG1024|consensus
Probab=97.83 E-value=2.8e-05 Score=57.80 Aligned_cols=49 Identities=18% Similarity=0.268 Sum_probs=43.4
Q ss_pred cCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcc
Q psy10024 7 LDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60 (69)
Q Consensus 7 ~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~ 60 (69)
.+|+|-.-|.+ |+.+|..+|.=||.-.|+.||+|.++..-|+.+..++.
T Consensus 512 kdGyRlaQP~N-----CPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt 560 (563)
T KOG1024|consen 512 KDGYRLAQPFN-----CPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLT 560 (563)
T ss_pred hccceecCCCC-----CcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHh
Confidence 57889888876 56689999999999999999999999999999887654
No 88
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.83 E-value=2.9e-05 Score=50.48 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=29.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIAS 54 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~ 54 (69)
.+..+.+++.+||..+|++||||.++...|+.
T Consensus 229 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 229 CPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 45689999999999999999999999988875
No 89
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.83 E-value=2.4e-05 Score=51.75 Aligned_cols=31 Identities=29% Similarity=0.501 Sum_probs=28.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.+..+.++|+.||..||+.|||+.+|.+.|.
T Consensus 246 ~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 246 CPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 4568999999999999999999999998875
No 90
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.81 E-value=2.7e-05 Score=50.79 Aligned_cols=39 Identities=23% Similarity=0.368 Sum_probs=31.6
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
+.++..|.. .+..+.+++..||..+|+.|||+.+|.+.|
T Consensus 217 ~~~~~~~~~-----~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 217 GYRLYRPKL-----APTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCcCCCCCC-----CCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 445555542 567899999999999999999999998876
No 91
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.80 E-value=3.7e-05 Score=49.84 Aligned_cols=30 Identities=23% Similarity=0.488 Sum_probs=27.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
....+.+|+..||+.+|+.|||+.++.+.|
T Consensus 226 ~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 346799999999999999999999998876
No 92
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.79 E-value=2.8e-05 Score=50.55 Aligned_cols=38 Identities=13% Similarity=0.182 Sum_probs=29.8
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKT 51 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~ 51 (69)
+.++++|.. ....+.++|.+||+.||+.||||.+|..+
T Consensus 215 ~~~~~~~~~-----~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 215 GSYKPLPSH-----YSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCCCcc-----cCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 445555543 34578999999999999999999998754
No 93
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.78 E-value=5.3e-05 Score=51.06 Aligned_cols=36 Identities=19% Similarity=0.401 Sum_probs=31.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
....+.+|+..||+.+|+.|||+.++...|..+...
T Consensus 248 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 248 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 456899999999999999999999999999887544
No 94
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=97.77 E-value=4e-05 Score=50.13 Aligned_cols=31 Identities=26% Similarity=0.445 Sum_probs=27.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
....+.++|..||+.||+.|||+.++...++
T Consensus 238 ~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 238 YSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 4568999999999999999999999988764
No 95
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.77 E-value=5.4e-05 Score=49.75 Aligned_cols=34 Identities=18% Similarity=0.339 Sum_probs=30.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
.+..+.+++..||+.||+.|||+.++.+.|+.+.
T Consensus 228 ~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 228 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 5678999999999999999999999999998754
No 96
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.75 E-value=4.1e-05 Score=49.50 Aligned_cols=31 Identities=19% Similarity=0.404 Sum_probs=28.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.+..+.++|..||..+|++|||+.++.+.|+
T Consensus 220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 5578999999999999999999999998875
No 97
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=97.74 E-value=2.4e-05 Score=52.06 Aligned_cols=30 Identities=17% Similarity=0.310 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
...+.++|..||+.+|+.||||.+|.+.|+
T Consensus 245 ~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 245 CKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 357999999999999999999999988773
No 98
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=97.74 E-value=4.1e-05 Score=49.43 Aligned_cols=37 Identities=11% Similarity=0.331 Sum_probs=29.9
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
+.+|.++.. ....+.++++.||+.+|+.||++.+|.+
T Consensus 216 ~~~~~~~~~-----~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 216 GVFPPVSQM-----YSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CCCCCCccc-----cCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 455666542 4568999999999999999999999865
No 99
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.72 E-value=4.5e-05 Score=48.94 Aligned_cols=39 Identities=21% Similarity=0.350 Sum_probs=31.6
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
+.++.+|.. ++..+.+++..||..||+.|||+.++.+.|
T Consensus 223 ~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 223 GYRLPKPEY-----CPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred CCCCCCCcc-----CChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 445555543 456899999999999999999999998876
No 100
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.72 E-value=3.6e-05 Score=51.41 Aligned_cols=31 Identities=29% Similarity=0.469 Sum_probs=28.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.+..+.+|+..||+.||+.|||+.+|.+.|.
T Consensus 264 ~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 264 CPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 4578999999999999999999999988875
No 101
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.70 E-value=2.9e-05 Score=51.44 Aligned_cols=31 Identities=26% Similarity=0.408 Sum_probs=28.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.+..+.+++..||+.||+.|||+.+|.+.|+
T Consensus 265 ~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 265 CPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 4468999999999999999999999988775
No 102
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=97.70 E-value=3.7e-05 Score=50.77 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=26.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
....+.+||..||+.||++||||.+|...+
T Consensus 232 ~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 232 SCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 456799999999999999999999997765
No 103
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.67 E-value=7.3e-05 Score=48.87 Aligned_cols=33 Identities=24% Similarity=0.413 Sum_probs=29.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
.+..+.+++..||+.||+.|||+.++.+.|+.+
T Consensus 228 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 228 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred CCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 456899999999999999999999999988753
No 104
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.67 E-value=4.8e-05 Score=48.93 Aligned_cols=40 Identities=23% Similarity=0.398 Sum_probs=31.2
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
.+.++.++.. .+..+.++++.||..||+.|||+.++.+.|
T Consensus 219 ~~~~~~~~~~-----~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 219 KGYRLPKPEN-----CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred cCCCCCCCCc-----CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 3445555543 557899999999999999999999998653
No 105
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.64 E-value=5.8e-05 Score=49.77 Aligned_cols=31 Identities=26% Similarity=0.546 Sum_probs=28.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.+..+.+++..||+.||+.|||+.++.+.|+
T Consensus 246 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 246 CPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 4568999999999999999999999998875
No 106
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=97.64 E-value=8.6e-05 Score=46.02 Aligned_cols=32 Identities=13% Similarity=0.128 Sum_probs=28.9
Q ss_pred HHHHHHHHhcccCCCCCCcHHHHHHHHHHHHh
Q psy10024 26 LVLKIMQECWYPVATARPTALRIKKTIASIIL 57 (69)
Q Consensus 26 ~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~ 57 (69)
.+.++|..||+.||+.|||+.++.+.+..+..
T Consensus 140 ~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 140 SFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred hHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 58999999999999999999999998877654
No 107
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.61 E-value=7.3e-05 Score=48.75 Aligned_cols=37 Identities=22% Similarity=0.324 Sum_probs=30.4
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
+.+|.+|.. ....+.++|+.||+.||+.|||+.+|.+
T Consensus 227 ~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 NASPEIPSN-----ISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred cCCCcCCcc-----cCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 456677654 4567999999999999999999999864
No 108
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.60 E-value=8.3e-05 Score=48.71 Aligned_cols=28 Identities=14% Similarity=0.208 Sum_probs=24.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++++||+.+|+.||||.+|..
T Consensus 237 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 237 LSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred cCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 4567999999999999999999999864
No 109
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=97.59 E-value=5.1e-05 Score=49.07 Aligned_cols=29 Identities=21% Similarity=0.478 Sum_probs=26.7
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
..+.++|..||+.+|+.||||.+|.+.|+
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 231 AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 68999999999999999999999998773
No 110
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.59 E-value=0.00012 Score=48.71 Aligned_cols=34 Identities=26% Similarity=0.395 Sum_probs=30.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
.+..+.+++..||+.||+.|||+.++.+.|++..
T Consensus 246 ~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 246 CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 4578999999999999999999999998888753
No 111
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=97.58 E-value=0.00012 Score=47.93 Aligned_cols=31 Identities=29% Similarity=0.478 Sum_probs=26.7
Q ss_pred ccHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 22 KDLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 22 ~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.....+.+++..|| .||+.|||+.+|.+.|.
T Consensus 238 ~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 238 KYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 35677899999999 59999999999998873
No 112
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=97.56 E-value=0.00015 Score=47.06 Aligned_cols=31 Identities=19% Similarity=0.455 Sum_probs=28.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.+..+.+++.+||+.+|+.|||+.+|...|.
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 226 CPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 4578999999999999999999999998874
No 113
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.55 E-value=7.3e-05 Score=48.86 Aligned_cols=29 Identities=17% Similarity=0.070 Sum_probs=25.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKT 51 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~ 51 (69)
....+.++|+.||+.||+.|||+.+|.+.
T Consensus 237 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 237 WSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred cCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 45789999999999999999999998753
No 114
>KOG0193|consensus
Probab=97.55 E-value=0.00015 Score=55.70 Aligned_cols=41 Identities=12% Similarity=0.306 Sum_probs=36.5
Q ss_pred ccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcccC
Q psy10024 22 KDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQAV 62 (69)
Q Consensus 22 ~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~~~ 62 (69)
.++.++.+|+.+||..+++.||+|.+|...|..+...+-++
T Consensus 620 ~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki 660 (678)
T KOG0193|consen 620 NCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKI 660 (678)
T ss_pred cCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhccccc
Confidence 57889999999999999999999999999999988765443
No 115
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=97.54 E-value=0.00011 Score=47.68 Aligned_cols=37 Identities=11% Similarity=0.132 Sum_probs=29.7
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
+.+|+++.. ....+.++|..||+.+|+.||++.+|.+
T Consensus 216 ~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 216 GSYPPVSSH-----YSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CCCCCCccc-----CCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 445555543 4467999999999999999999999975
No 116
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.53 E-value=8.6e-05 Score=48.71 Aligned_cols=32 Identities=19% Similarity=0.397 Sum_probs=29.2
Q ss_pred ccHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 22 KDLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 22 ~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
..+..+.+++..||..||+.|||+.++.+.|.
T Consensus 243 ~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 243 GCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 46678999999999999999999999998875
No 117
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.50 E-value=0.00012 Score=47.15 Aligned_cols=28 Identities=11% Similarity=0.013 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||+.||+.|||+.++..
T Consensus 225 ~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 225 YSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 4567999999999999999999999864
No 118
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.49 E-value=0.00015 Score=49.65 Aligned_cols=28 Identities=7% Similarity=0.046 Sum_probs=25.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||..||+.|||+.+|.+
T Consensus 273 ~~~~l~~li~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 273 FTPDFQEFVNKCLIKNPAERADLKMLMN 300 (331)
T ss_pred ccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 5568999999999999999999999964
No 119
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.48 E-value=0.00015 Score=47.14 Aligned_cols=28 Identities=11% Similarity=0.077 Sum_probs=24.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||..||++|||+.++..
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 229 FSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred cCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 4567999999999999999999999863
No 120
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.48 E-value=0.00014 Score=47.21 Aligned_cols=36 Identities=17% Similarity=0.297 Sum_probs=28.9
Q ss_pred CCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 10 IRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 10 ~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.++.+|.. ....+.++|..||+.+|+.|||+.++.+
T Consensus 224 ~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 224 TNPQLPSH-----VSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred CCCCCCcc-----CCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 34555543 5568999999999999999999999865
No 121
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=97.47 E-value=0.00016 Score=47.77 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=25.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKT 51 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~ 51 (69)
.+..+.+++..||+.+|+.|||+.+|.+.
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 225 FSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 56789999999999999999999999643
No 122
>KOG0195|consensus
Probab=97.47 E-value=8.7e-05 Score=53.46 Aligned_cols=47 Identities=23% Similarity=0.334 Sum_probs=41.4
Q ss_pred eecCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 5 VCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 5 Vv~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
|+-+|+|+.||+... ..+.+||.=|-++||-+||.|..|.-.|+++.
T Consensus 401 ialeglrv~ippgis-----~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 401 IALEGLRVHIPPGIS-----RHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred hhhccccccCCCCcc-----HHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 456899999999744 45899999999999999999999999999874
No 123
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=97.46 E-value=0.00015 Score=56.01 Aligned_cols=35 Identities=31% Similarity=0.326 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
...+.+++..||+.||+.||||.+|.+.|+++...
T Consensus 920 ~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 920 IVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred HHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 44677899999999999999999999999998664
No 124
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=97.44 E-value=0.00019 Score=47.43 Aligned_cols=29 Identities=10% Similarity=0.158 Sum_probs=26.2
Q ss_pred ccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 22 KDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 22 ~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.....+.+||..||+.||+.|||+.+|.+
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 238 EFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 36678999999999999999999999875
No 125
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=97.44 E-value=0.00015 Score=47.79 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=25.7
Q ss_pred ccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 22 KDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 22 ~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
..+..+.++|..||+.||+.|||+.+|.+
T Consensus 250 ~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 250 KWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 35678999999999999999999999854
No 126
>KOG4721|consensus
Probab=97.43 E-value=0.00019 Score=55.57 Aligned_cols=42 Identities=14% Similarity=0.350 Sum_probs=34.2
Q ss_pred cCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 7 LDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 7 ~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.+.+--+.|.. ++.+|.-||++||...|-+||||.+|..-|+
T Consensus 325 sNsL~LpvPst-----cP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 325 SNSLHLPVPST-----CPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred CCcccccCccc-----CchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 34445566664 6778999999999999999999999987765
No 127
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.43 E-value=0.00017 Score=46.49 Aligned_cols=28 Identities=14% Similarity=0.127 Sum_probs=25.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++.+||+.+|++|||+.+|.+
T Consensus 226 ~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 226 FSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 4567999999999999999999999864
No 128
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=97.39 E-value=0.00022 Score=46.41 Aligned_cols=37 Identities=24% Similarity=0.313 Sum_probs=29.1
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
+..|.++. .....+.++|..||+.||++|||+.+|.+
T Consensus 220 ~~~~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 220 GPTPSLPE-----TYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred CCCCCCcc-----hhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 44555543 24568999999999999999999999864
No 129
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.37 E-value=0.00024 Score=46.30 Aligned_cols=37 Identities=19% Similarity=0.423 Sum_probs=29.3
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
+..|.++.. ....+.++|++||+.+|+.|||+.++..
T Consensus 225 ~~~~~~~~~-----~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 225 GLMPRLPDS-----FSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCCCCCC-----CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 345555543 4567999999999999999999998853
No 130
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.36 E-value=0.00025 Score=46.41 Aligned_cols=42 Identities=21% Similarity=0.356 Sum_probs=31.9
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.+.++.++.... ...+..+.++|..||+.+|+.|||+.+|..
T Consensus 227 ~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 227 KRSAPPIPPDVS-MNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cccCCcCCcccc-ccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 344666665432 235678999999999999999999998864
No 131
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.36 E-value=0.0003 Score=46.37 Aligned_cols=28 Identities=21% Similarity=0.240 Sum_probs=25.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||+.+|+.|||+.+|.+
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 225 YSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 4567999999999999999999999976
No 132
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.33 E-value=0.00029 Score=45.59 Aligned_cols=28 Identities=11% Similarity=0.058 Sum_probs=25.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||+.||+.|||+.++.+
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 226 YSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred cCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 5568999999999999999999999864
No 133
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.33 E-value=0.00027 Score=45.53 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=29.2
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
+.+|.+++. ....+.+++..||+.+|+.|||+.++..
T Consensus 218 ~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 218 KELPPIPDH-----LSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ccCCCcCCC-----cCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 345555543 4568999999999999999999999864
No 134
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.32 E-value=0.00037 Score=45.08 Aligned_cols=29 Identities=28% Similarity=0.300 Sum_probs=25.7
Q ss_pred ccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 22 KDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 22 ~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.....+.+++..||..||+.|||+.+|.+
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 235 KYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 35678999999999999999999999864
No 135
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.31 E-value=0.00036 Score=45.18 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=30.3
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
+.+|.+|.. ..+...+.+++..||+.+|++|||+.+|..
T Consensus 222 ~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 222 GHKPPIPDS---LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCCCCCcc---cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 456666653 123567899999999999999999998853
No 136
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=97.28 E-value=0.00033 Score=45.74 Aligned_cols=28 Identities=18% Similarity=0.255 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+||..||..||+.|||+.+|.+
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 241 WSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 4568999999999999999999998864
No 137
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.27 E-value=0.00028 Score=46.77 Aligned_cols=30 Identities=17% Similarity=0.165 Sum_probs=26.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
.+..+.+|+..||+.||+.|||+.+|.+..
T Consensus 238 ~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 238 FPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred cCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 557899999999999999999999998653
No 138
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.27 E-value=0.00036 Score=44.60 Aligned_cols=28 Identities=11% Similarity=0.083 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++++.||+.+|+.|||+.++.+
T Consensus 227 ~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 227 YSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 4567999999999999999999999864
No 139
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.27 E-value=0.00024 Score=46.75 Aligned_cols=28 Identities=21% Similarity=0.344 Sum_probs=24.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||+.+|+.|||+.+|.+
T Consensus 255 ~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 255 LSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 4567999999999999999999998864
No 140
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.27 E-value=0.00028 Score=46.54 Aligned_cols=28 Identities=14% Similarity=0.207 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKKT 51 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~ 51 (69)
...+..+|..||+.||++||||.+|.+.
T Consensus 256 ~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 256 SNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 4579999999999999999999998753
No 141
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.26 E-value=0.00028 Score=47.45 Aligned_cols=28 Identities=14% Similarity=0.281 Sum_probs=25.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|++||+.||+.|||+.+|..
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 239 WSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred hCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 4467999999999999999999999965
No 142
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.25 E-value=0.00041 Score=44.61 Aligned_cols=28 Identities=7% Similarity=0.071 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||+.+|+.|||+.+|.+
T Consensus 234 ~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 234 YSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 3467999999999999999999999865
No 143
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.25 E-value=0.00039 Score=47.74 Aligned_cols=28 Identities=7% Similarity=0.027 Sum_probs=24.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||+.|||+.++.+
T Consensus 271 ~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 271 FGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred cCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 4467999999999999999999999953
No 144
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.24 E-value=0.00033 Score=47.32 Aligned_cols=29 Identities=10% Similarity=0.104 Sum_probs=25.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKT 51 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~ 51 (69)
....+.++|..||..||+.||||.+|.+.
T Consensus 259 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 259 FSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 45679999999999999999999998754
No 145
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.24 E-value=0.00044 Score=45.64 Aligned_cols=28 Identities=21% Similarity=0.292 Sum_probs=25.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.+..+.+++..||+.+|+.||++.++.+
T Consensus 225 ~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 225 YSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 4568999999999999999999999987
No 146
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.24 E-value=0.00042 Score=45.47 Aligned_cols=28 Identities=18% Similarity=0.201 Sum_probs=25.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.+..+.++|..||+.||+.|||+.++.+
T Consensus 227 ~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 227 YSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 5678999999999999999999999975
No 147
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.22 E-value=0.00035 Score=45.90 Aligned_cols=28 Identities=11% Similarity=0.094 Sum_probs=25.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.+..+.++|..||..+|+.|||+.+|.+
T Consensus 233 ~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 233 FSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 4578999999999999999999999875
No 148
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.21 E-value=0.00039 Score=47.97 Aligned_cols=28 Identities=11% Similarity=0.139 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+||..||+.||+.|||+.+|.+
T Consensus 300 ~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 300 ASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 4568999999999999999999999875
No 149
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.21 E-value=0.00046 Score=45.57 Aligned_cols=28 Identities=14% Similarity=0.252 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.+|+.|||+.++..
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 234 YSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 4568999999999999999999999875
No 150
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.20 E-value=0.00025 Score=45.73 Aligned_cols=28 Identities=14% Similarity=0.249 Sum_probs=24.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||+.|||+.+|.+
T Consensus 225 ~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 225 WSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred cCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 3467999999999999999999998864
No 151
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.19 E-value=0.00027 Score=45.79 Aligned_cols=28 Identities=14% Similarity=0.119 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|++||+.||+.|||+.++.+
T Consensus 244 ~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 244 WSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred cCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 4468999999999999999999999864
No 152
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.18 E-value=0.00032 Score=45.40 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=24.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|+.||..||+.|||+.+|.+
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 232 WSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 4567999999999999999999998864
No 153
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.18 E-value=0.00046 Score=44.69 Aligned_cols=29 Identities=14% Similarity=0.123 Sum_probs=26.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKT 51 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~ 51 (69)
....+.++|..||..+|+.|||+.++.+.
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 225 YSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 56789999999999999999999998764
No 154
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.17 E-value=0.00029 Score=46.54 Aligned_cols=28 Identities=14% Similarity=0.094 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||++|||+.+|.+
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 234 WSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 4568999999999999999999998853
No 155
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.15 E-value=0.00051 Score=45.66 Aligned_cols=28 Identities=18% Similarity=0.216 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||+.|||+.+|.+
T Consensus 238 ~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 238 WSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred hHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 4568999999999999999999999875
No 156
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.14 E-value=0.00029 Score=46.24 Aligned_cols=27 Identities=15% Similarity=0.167 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.++|+.||+.+|+.|||+.+|.+
T Consensus 258 ~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 258 SSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred chHHHHHHHHHhccCchhcccHHHHhc
Confidence 577999999999999999999998864
No 157
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.14 E-value=0.00032 Score=46.12 Aligned_cols=28 Identities=11% Similarity=-0.059 Sum_probs=24.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...++.++|++||+.||+.|||+.+|.+
T Consensus 254 ~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 254 LDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred CCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 4567889999999999999999998864
No 158
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=97.14 E-value=0.00068 Score=45.77 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.+|+.|||+.++.+
T Consensus 239 ~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 239 WSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred ccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 4567999999999999999999998864
No 159
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.13 E-value=0.00057 Score=44.88 Aligned_cols=28 Identities=18% Similarity=0.179 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||..||++|||+.++.+
T Consensus 223 ~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 223 FSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred cCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 5678999999999999999999999964
No 160
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=97.13 E-value=0.00044 Score=45.21 Aligned_cols=28 Identities=14% Similarity=-0.007 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|.+||+.||..|||+.++..
T Consensus 252 ~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 252 ASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 4567999999999999999999999864
No 161
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=97.11 E-value=0.00048 Score=45.15 Aligned_cols=35 Identities=20% Similarity=0.408 Sum_probs=26.2
Q ss_pred CCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 10 IRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 10 ~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.+|.+|.. ....+..++ .||..+|++||||.+|.+
T Consensus 226 ~~~~~~~~-----~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 226 TNPQLPSH-----ISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCCCCchh-----cCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 34555542 345678888 799999999999999854
No 162
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.10 E-value=0.00036 Score=44.24 Aligned_cols=27 Identities=22% Similarity=0.327 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.+++..||+.||+.|||+.++.+
T Consensus 224 ~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 224 SDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 567999999999999999999998864
No 163
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=97.08 E-value=0.00046 Score=45.73 Aligned_cols=32 Identities=9% Similarity=-0.142 Sum_probs=27.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIAS 54 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~ 54 (69)
....+.+++.+||+.||+.|||+..+.+.|+.
T Consensus 235 ~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 235 MSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred cCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 34678999999999999999999988876654
No 164
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=97.08 E-value=0.00054 Score=45.91 Aligned_cols=27 Identities=15% Similarity=0.265 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.++|..||..||+.|||+.++.+
T Consensus 268 ~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 268 SEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred HHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 356888999999999999999999864
No 165
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.05 E-value=0.00091 Score=42.56 Aligned_cols=37 Identities=22% Similarity=0.334 Sum_probs=29.5
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
+..+.+|..+ ...+.+++..||+.||+.|||+.++.+
T Consensus 220 ~~~~~~~~~~-----~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 220 GEPPEIPEHL-----SEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCCcCCCccc-----CHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 3455556543 468999999999999999999999864
No 166
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=97.04 E-value=0.00077 Score=43.34 Aligned_cols=28 Identities=11% Similarity=0.055 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||..+|+.|||+.++.+
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 225 YSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred hCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 4467999999999999999999998864
No 167
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.03 E-value=0.00068 Score=43.45 Aligned_cols=28 Identities=21% Similarity=0.298 Sum_probs=24.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+..++..||+.+|+.|||+.++..
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 223 ISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 4578999999999999999999998863
No 168
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=97.03 E-value=0.00052 Score=45.02 Aligned_cols=28 Identities=14% Similarity=0.131 Sum_probs=24.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||+.||+.|||+.++.+
T Consensus 255 ~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 255 ISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 3567899999999999999999998853
No 169
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=97.01 E-value=0.00076 Score=44.28 Aligned_cols=27 Identities=15% Similarity=0.135 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.++++.||..||+.|||+.+|..
T Consensus 253 ~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 253 SPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred CHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 467999999999999999999998864
No 170
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.00 E-value=0.00091 Score=44.35 Aligned_cols=28 Identities=14% Similarity=0.199 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||+.|||+.+|..
T Consensus 259 ~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 259 WCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred cCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 4467999999999999999999999864
No 171
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=96.97 E-value=0.00083 Score=43.98 Aligned_cols=27 Identities=11% Similarity=0.036 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.+++++||+.||++|||+.++..
T Consensus 257 ~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 257 CEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 467789999999999999999998863
No 172
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=96.97 E-value=0.00086 Score=45.63 Aligned_cols=27 Identities=15% Similarity=0.176 Sum_probs=24.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
....+.+||..||..||+.|||+.++.
T Consensus 280 ~~~~~~~li~~~l~~dP~~Rpta~e~l 306 (328)
T cd08226 280 FSPAFQNLVELCLQQDPEKRPSASSLL 306 (328)
T ss_pred hhHHHHHHHHHHccCCcccCCCHHHHh
Confidence 456789999999999999999999996
No 173
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=96.96 E-value=0.0008 Score=42.23 Aligned_cols=28 Identities=11% Similarity=-0.078 Sum_probs=25.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||..+|+.|||+.++.+
T Consensus 213 ~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 213 ISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred CCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 5568999999999999999999999875
No 174
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=96.93 E-value=0.00078 Score=44.34 Aligned_cols=28 Identities=7% Similarity=-0.217 Sum_probs=24.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|.+||+.||+.|||+.++.+
T Consensus 253 ~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 253 LDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred CCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 3457889999999999999999998863
No 175
>PHA02882 putative serine/threonine kinase; Provisional
Probab=96.93 E-value=0.00083 Score=45.14 Aligned_cols=30 Identities=7% Similarity=0.021 Sum_probs=27.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
.+..+.++|+.||..+|++||++.+|++.|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 264 ANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred CCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 457899999999999999999999999876
No 176
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=96.93 E-value=0.00082 Score=44.69 Aligned_cols=28 Identities=11% Similarity=0.071 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||++|||+.+|.+
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 241 WSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred cCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 4467999999999999999999999864
No 177
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=96.92 E-value=0.00085 Score=43.92 Aligned_cols=28 Identities=14% Similarity=-0.002 Sum_probs=25.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||+.|||+.++..
T Consensus 251 ~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 251 ASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 4578999999999999999999998864
No 178
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=96.91 E-value=0.0012 Score=48.38 Aligned_cols=37 Identities=11% Similarity=0.100 Sum_probs=29.3
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
+.++++|+. ....+.+|+..||+.||+.|||+.++..
T Consensus 260 ~~~~~~~~~-----~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 260 GRYDPLPPS-----ISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CCCCCCCCC-----CCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 334455543 4568999999999999999999999864
No 179
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.90 E-value=0.00087 Score=45.00 Aligned_cols=28 Identities=11% Similarity=0.109 Sum_probs=25.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||+.|||+.+|..
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred cCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 4567999999999999999999999875
No 180
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=96.90 E-value=0.00073 Score=45.10 Aligned_cols=28 Identities=11% Similarity=0.030 Sum_probs=25.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||+.|||+.+|..
T Consensus 245 ~~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 245 FSPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 4578999999999999999999999864
No 181
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=96.89 E-value=0.00072 Score=43.58 Aligned_cols=27 Identities=15% Similarity=0.178 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.+++..||+.||+.|||+.++.+
T Consensus 230 ~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 230 SEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 478999999999999999999999864
No 182
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=96.89 E-value=0.0011 Score=43.90 Aligned_cols=28 Identities=11% Similarity=0.228 Sum_probs=24.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||++|||+.++.+
T Consensus 225 ~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 225 FSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred CCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 4567999999999999999999999864
No 183
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=96.88 E-value=0.0013 Score=43.64 Aligned_cols=28 Identities=18% Similarity=0.046 Sum_probs=25.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|+.||..||+.|||+.+|.+
T Consensus 254 ~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 254 ASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred ccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 3567899999999999999999999976
No 184
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=96.87 E-value=0.00082 Score=44.23 Aligned_cols=28 Identities=11% Similarity=-0.123 Sum_probs=24.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++++.||+.||++|||+.++.+
T Consensus 253 ~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 253 LNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 4467889999999999999999998864
No 185
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=96.86 E-value=0.00099 Score=43.51 Aligned_cols=27 Identities=11% Similarity=-0.023 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.++++.||+.||+.|||+.++.+
T Consensus 257 ~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 257 DPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 567899999999999999999998864
No 186
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=96.84 E-value=0.00089 Score=44.89 Aligned_cols=28 Identities=11% Similarity=0.110 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|++||+.+|+.||||.+|..
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 241 LSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 4567999999999999999999999864
No 187
>KOG1025|consensus
Probab=96.83 E-value=0.0023 Score=51.28 Aligned_cols=49 Identities=22% Similarity=0.274 Sum_probs=41.4
Q ss_pred cCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcc
Q psy10024 7 LDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60 (69)
Q Consensus 7 ~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~ 60 (69)
..|.|-+-|+. +.-++..+|-+||..|+..||+|.++...++++.+...
T Consensus 914 e~geRLsqPpi-----CtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 914 EKGERLSQPPI-----CTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred hccccCCCCCC-----ccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 46778777776 45678999999999999999999999999999876644
No 188
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=96.83 E-value=0.00089 Score=44.08 Aligned_cols=28 Identities=21% Similarity=0.240 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.+|+.|||+.+|.+
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 234 WSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 4467999999999999999999999864
No 189
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=96.83 E-value=0.0009 Score=45.53 Aligned_cols=27 Identities=19% Similarity=0.295 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.++++.||+.||+.|||+.++.+
T Consensus 280 ~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 280 SPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred CHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 457899999999999999999999964
No 190
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=96.82 E-value=0.00088 Score=44.07 Aligned_cols=28 Identities=11% Similarity=-0.113 Sum_probs=24.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++.+||+.||++|||+.+|.+
T Consensus 252 ~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 252 LDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 4467899999999999999999998863
No 191
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.81 E-value=0.00097 Score=44.86 Aligned_cols=28 Identities=11% Similarity=0.107 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||..||+.|||+.+|.+
T Consensus 241 ~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 241 LSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 5567999999999999999999999863
No 192
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=96.80 E-value=0.0011 Score=44.03 Aligned_cols=26 Identities=12% Similarity=-0.008 Sum_probs=22.9
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
..+.++|..||..||++|||+.++.+
T Consensus 281 ~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 281 PHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHHHHHHHHhcCChhhccCHHHHhc
Confidence 46779999999999999999998853
No 193
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=96.80 E-value=0.001 Score=44.10 Aligned_cols=28 Identities=14% Similarity=-0.027 Sum_probs=25.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.+..+.+++..||+.||+.|||+.+|..
T Consensus 271 ~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 271 IPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 4578999999999999999999998864
No 194
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=96.80 E-value=0.00058 Score=43.93 Aligned_cols=30 Identities=13% Similarity=0.131 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
...+..++++||+.+|+.|||+..|.+.|+
T Consensus 227 ~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 227 SDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred CHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 578999999999999999999977766554
No 195
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=96.77 E-value=0.0012 Score=43.84 Aligned_cols=27 Identities=11% Similarity=-0.061 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.++|+.||+.||+.|||+.++..
T Consensus 263 ~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 263 SDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ChHHHHHHHHHhccCccccCCHHHHhc
Confidence 567899999999999999999999864
No 196
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=96.77 E-value=0.0016 Score=42.41 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=28.3
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCc-----HHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPT-----ALRIKK 50 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt-----~~~I~~ 50 (69)
..++.+|... ...+.++|.+||+.||+.||| +.++.+
T Consensus 210 ~~~~~~~~~~-----~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 210 NGKLEFPNYI-----DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CCCCCCCccc-----CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 3456666542 467999999999999999999 666643
No 197
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=96.76 E-value=0.001 Score=44.97 Aligned_cols=28 Identities=11% Similarity=-0.041 Sum_probs=25.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|+.||+.+|+.|||+.++..
T Consensus 261 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 261 ASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 4567899999999999999999999975
No 198
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=96.76 E-value=0.0014 Score=42.34 Aligned_cols=28 Identities=14% Similarity=0.178 Sum_probs=25.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++++.||+.+|+.|||+.++.+
T Consensus 228 ~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 228 FSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 5578999999999999999999999975
No 199
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=96.73 E-value=0.0013 Score=43.49 Aligned_cols=28 Identities=14% Similarity=0.181 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.+..+.++|..||+.+|..|||+.+|..
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 242 WSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 4568999999999999999999999964
No 200
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=96.71 E-value=0.0019 Score=42.01 Aligned_cols=28 Identities=14% Similarity=0.116 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||+.+|+.|||+.++.+
T Consensus 236 ~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 236 LSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred hCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 4467999999999999999999999864
No 201
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=96.71 E-value=0.0023 Score=43.33 Aligned_cols=31 Identities=16% Similarity=0.264 Sum_probs=26.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
....+.++|.+||+.+|..|||+.+|.+.+-
T Consensus 249 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 249 WSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred ccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 4567999999999999999999999987543
No 202
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=96.69 E-value=0.0015 Score=44.15 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=24.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||+.||+.|||+.++.+
T Consensus 262 ~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 262 ADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred CChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 4467899999999999999999999874
No 203
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=96.67 E-value=0.0018 Score=42.30 Aligned_cols=27 Identities=11% Similarity=-0.052 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.+++..||..||+.|||+.++..
T Consensus 252 ~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 252 DPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 467999999999999999999999864
No 204
>KOG1094|consensus
Probab=96.63 E-value=0.0028 Score=49.22 Aligned_cols=33 Identities=15% Similarity=0.309 Sum_probs=29.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
++.++.+||..||.-|.++||||.++..-|...
T Consensus 772 cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 772 CPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 456788999999999999999999998887654
No 205
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=96.58 E-value=0.002 Score=43.88 Aligned_cols=29 Identities=14% Similarity=0.013 Sum_probs=25.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKT 51 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~ 51 (69)
....+.++|..||+.||++|||+.++...
T Consensus 267 ~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 267 ASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred CCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 45679999999999999999999999853
No 206
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=96.57 E-value=0.0024 Score=41.69 Aligned_cols=28 Identities=14% Similarity=0.087 Sum_probs=24.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||..||+.|||+.+|.+
T Consensus 237 ~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 237 WSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 4567899999999999999999998764
No 207
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=96.55 E-value=0.0017 Score=43.28 Aligned_cols=28 Identities=11% Similarity=0.018 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.+|+.|||+.++.+
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 5578999999999999999999998864
No 208
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=96.53 E-value=0.0019 Score=42.69 Aligned_cols=28 Identities=14% Similarity=-0.089 Sum_probs=24.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||+.|||+.++..
T Consensus 263 ~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 263 LSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred cCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 4567999999999999999999998853
No 209
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=96.53 E-value=0.002 Score=41.81 Aligned_cols=32 Identities=9% Similarity=0.080 Sum_probs=26.0
Q ss_pred CCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHH
Q psy10024 10 IRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTAL 46 (69)
Q Consensus 10 ~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~ 46 (69)
.++.+|..+ +..+.++|+.||+.||..||++.
T Consensus 217 ~~~~~~~~~-----~~~~~~~i~~~l~~~p~~R~~~~ 248 (258)
T cd05578 217 ADVLYPATW-----STEAIDAINKLLERDPQKRLGDN 248 (258)
T ss_pred ccccCcccC-----cHHHHHHHHHHccCChhHcCCcc
Confidence 455666553 36799999999999999999994
No 210
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.53 E-value=0.002 Score=43.29 Aligned_cols=28 Identities=11% Similarity=0.097 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||..||+.|||+.+|.+
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 241 LSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 4467899999999999999999999975
No 211
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=96.46 E-value=0.0022 Score=43.88 Aligned_cols=29 Identities=10% Similarity=0.028 Sum_probs=25.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKT 51 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~ 51 (69)
....+.++|+.||+.||+.|||+.++.+-
T Consensus 263 ~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 263 ANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred CCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 45678999999999999999999998754
No 212
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=96.46 E-value=0.0027 Score=40.72 Aligned_cols=25 Identities=8% Similarity=-0.195 Sum_probs=22.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALR 47 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~ 47 (69)
.+..+.++|+.||..||+.|||+..
T Consensus 216 ~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 216 LSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCHHHHHHHHHHhcCCHhhCCCccc
Confidence 3567999999999999999999954
No 213
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=96.46 E-value=0.0021 Score=43.91 Aligned_cols=28 Identities=11% Similarity=-0.070 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKKT 51 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~ 51 (69)
...+.++|..||+.||++|||+.++.+.
T Consensus 265 ~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 265 DPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 3568899999999999999999998754
No 214
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=96.45 E-value=0.0013 Score=42.83 Aligned_cols=31 Identities=6% Similarity=-0.081 Sum_probs=26.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
.+..+.+++++||+.||+.|||+..+.+.|+
T Consensus 220 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 220 CSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred CCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 4578999999999999999998877766543
No 215
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=96.44 E-value=0.0032 Score=42.65 Aligned_cols=28 Identities=11% Similarity=0.215 Sum_probs=24.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||+.+|+.|||+.++..
T Consensus 245 ~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 245 WTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 3457999999999999999999999874
No 216
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=96.37 E-value=0.0029 Score=43.15 Aligned_cols=28 Identities=11% Similarity=-0.021 Sum_probs=25.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||+.+|+.|||+.++..
T Consensus 266 ~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 266 ASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 4578999999999999999999998764
No 217
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=96.36 E-value=0.0042 Score=41.13 Aligned_cols=27 Identities=7% Similarity=-0.081 Sum_probs=24.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
....+.+++..|+..||++|||+.++.
T Consensus 260 ~~~~~~~ll~~~l~~dp~~R~t~~~~l 286 (291)
T cd07870 260 RPPKAEDLASQMLMMFPKDRISAQDAL 286 (291)
T ss_pred CChHHHHHHHHHhCcCcccCcCHHHHh
Confidence 356789999999999999999998875
No 218
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=96.35 E-value=0.003 Score=43.40 Aligned_cols=27 Identities=15% Similarity=0.085 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.++|..||+.||+.|||+.+|..
T Consensus 271 s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 271 NPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred CHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 467899999999999999999999853
No 219
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=96.35 E-value=0.0046 Score=44.90 Aligned_cols=28 Identities=11% Similarity=0.061 Sum_probs=24.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||+.|||+.++..
T Consensus 295 ~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 295 VSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 4467999999999999999999998853
No 220
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=96.31 E-value=0.0029 Score=41.80 Aligned_cols=28 Identities=14% Similarity=0.042 Sum_probs=24.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+|+..|+..||+.|||+.++.+
T Consensus 259 ~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 259 IDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 4467889999999999999999999863
No 221
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=96.30 E-value=0.0031 Score=43.28 Aligned_cols=27 Identities=11% Similarity=-0.004 Sum_probs=24.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
....+.++|..||+.||++|||+.++.
T Consensus 269 ~~~~~~~li~~~l~~dP~~R~~~~e~l 295 (342)
T cd07879 269 ASPQAVDLLEKMLELDVDKRLTATEAL 295 (342)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 345688999999999999999999997
No 222
>PHA03209 serine/threonine kinase US3; Provisional
Probab=96.29 E-value=0.0028 Score=44.01 Aligned_cols=26 Identities=19% Similarity=-0.040 Sum_probs=22.6
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
...+..||..||+.||++|||+.++.
T Consensus 324 ~~~~~~li~~mL~~dP~~Rpta~e~l 349 (357)
T PHA03209 324 PIDGEFLVHKMLTFDAAMRPSAEEIL 349 (357)
T ss_pred CchHHHHHHHHHcCCcccCcCHHHHh
Confidence 34567799999999999999999885
No 223
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=96.28 E-value=0.0022 Score=43.07 Aligned_cols=32 Identities=3% Similarity=-0.231 Sum_probs=26.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIAS 54 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~ 54 (69)
.+..+.++|+.||+.||+.|||+..+.+.|+.
T Consensus 242 ~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 242 LPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred CCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 56779999999999999999997666655553
No 224
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=96.27 E-value=0.0035 Score=42.07 Aligned_cols=28 Identities=11% Similarity=0.050 Sum_probs=25.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+..+++.||..||..|||+.+|.+
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 4567899999999999999999999975
No 225
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=96.26 E-value=0.0047 Score=40.45 Aligned_cols=28 Identities=11% Similarity=0.026 Sum_probs=24.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++++.|++.||+.|||+.++..
T Consensus 254 ~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 254 ASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred ccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 3478999999999999999999998854
No 226
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=96.26 E-value=0.0026 Score=41.38 Aligned_cols=27 Identities=7% Similarity=-0.119 Sum_probs=23.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcH----HHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTA----LRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~----~~I~ 49 (69)
.++.+.++++.||+.||+.|||+ .++.
T Consensus 245 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll 275 (280)
T cd05581 245 FPPDAKDLIEKLLVLDPQDRLGVNEGYDELK 275 (280)
T ss_pred cCHHHHHHHHHHhcCCHhhCCCcccCHHHHh
Confidence 34679999999999999999999 6664
No 227
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=96.26 E-value=0.0042 Score=40.99 Aligned_cols=28 Identities=14% Similarity=0.014 Sum_probs=24.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+||..|++.||+.|||+.++.+
T Consensus 256 ~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 256 LSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 3457999999999999999999998753
No 228
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=96.23 E-value=0.0043 Score=41.28 Aligned_cols=27 Identities=15% Similarity=-0.045 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.+++..|++.||+.|||+.++..
T Consensus 286 ~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 286 DSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 356889999999999999999998863
No 229
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=96.21 E-value=0.0043 Score=42.53 Aligned_cols=28 Identities=7% Similarity=-0.035 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|+.||+.+|++|||+.++..
T Consensus 260 ~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 260 ADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 4468999999999999999999998854
No 230
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=96.16 E-value=0.0042 Score=40.75 Aligned_cols=27 Identities=11% Similarity=-0.009 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.+++..||+.||+.|||+.+|.+
T Consensus 254 ~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 254 DPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 457889999999999999999998863
No 231
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=96.15 E-value=0.0045 Score=37.51 Aligned_cols=27 Identities=15% Similarity=0.182 Sum_probs=24.4
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHHHH
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIKKT 51 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~~~ 51 (69)
..+.+++..|++.||+.|||+.++.+.
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 578999999999999999999988764
No 232
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=96.14 E-value=0.0055 Score=41.22 Aligned_cols=28 Identities=11% Similarity=0.058 Sum_probs=25.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|.+||+.+|+.|||+.++..
T Consensus 243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 243 ISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 4567999999999999999999999876
No 233
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=96.11 E-value=0.0038 Score=41.57 Aligned_cols=27 Identities=15% Similarity=-0.074 Sum_probs=23.6
Q ss_pred cHHHHHHHHHHhcccCCCCCC-----cHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARP-----TALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rp-----t~~~I~ 49 (69)
....+.+||..||+.||+.|| ++.++.
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~ 259 (285)
T cd05605 228 FSEAARSICRQLLTKDPGFRLGCRGEGAEEVK 259 (285)
T ss_pred cCHHHHHHHHHHccCCHHHhcCCCCCCHHHHh
Confidence 456799999999999999999 777874
No 234
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=95.99 E-value=0.006 Score=41.89 Aligned_cols=27 Identities=15% Similarity=-0.075 Sum_probs=24.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
....+.++|..||..||+.|||+.++.
T Consensus 272 ~~~~~~~li~~~L~~dP~~R~t~~ell 298 (342)
T cd07854 272 VNPEALDFLEQILTFNPMDRLTAEEAL 298 (342)
T ss_pred CCHHHHHHHHHHhCCCchhccCHHHHh
Confidence 345788999999999999999999986
No 235
>PTZ00036 glycogen synthase kinase; Provisional
Probab=95.93 E-value=0.0041 Score=44.81 Aligned_cols=27 Identities=4% Similarity=-0.038 Sum_probs=24.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
.+..+.+||..||..||+.|||+.++.
T Consensus 323 ~~~~~~~li~~~L~~dP~~R~ta~e~l 349 (440)
T PTZ00036 323 TPDDAINFISQFLKYEPLKRLNPIEAL 349 (440)
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 446799999999999999999999986
No 236
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=95.92 E-value=0.0084 Score=40.84 Aligned_cols=27 Identities=15% Similarity=0.032 Sum_probs=24.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
....+.+++..|++.||+.|||+.++.
T Consensus 264 ~~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 264 ANPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred CCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 346799999999999999999999985
No 237
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=95.88 E-value=0.0075 Score=41.59 Aligned_cols=27 Identities=4% Similarity=-0.073 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.+||..||+.||+.|||+.++..
T Consensus 288 ~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 288 TSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred chhHHHHHHHHhccCcccCCCHHHHhc
Confidence 356899999999999999999999965
No 238
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=95.87 E-value=0.0077 Score=40.47 Aligned_cols=28 Identities=14% Similarity=0.027 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..||+.||..|||+.++..
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 4568999999999999999999999875
No 239
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=95.86 E-value=0.01 Score=39.86 Aligned_cols=27 Identities=7% Similarity=-0.074 Sum_probs=22.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
.+..+.++++.||+.||+.|||+....
T Consensus 257 ~~~~~~~li~~~l~~~p~~R~s~~~~~ 283 (316)
T cd05574 257 VSSSARDLIRKLLVKDPSKRLGSKRGA 283 (316)
T ss_pred cCHHHHHHHHHHccCCHhHCCCchhhH
Confidence 567899999999999999999944333
No 240
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=95.77 E-value=0.0089 Score=41.12 Aligned_cols=28 Identities=4% Similarity=-0.086 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||+.||+.|||+.++..
T Consensus 283 ~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 283 KASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred chhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 4557899999999999999999999963
No 241
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=95.75 E-value=0.0093 Score=40.97 Aligned_cols=27 Identities=4% Similarity=-0.079 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.+||..|+..||+.|||+.++.+
T Consensus 284 ~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 284 ASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred chHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 457899999999999999999999875
No 242
>KOG2345|consensus
Probab=95.61 E-value=0.022 Score=40.38 Aligned_cols=37 Identities=11% Similarity=0.200 Sum_probs=33.2
Q ss_pred cCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 20 ACKDLHLVLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 20 ~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
++...+.+.++++.|-..||..|||..++...++.+.
T Consensus 265 ~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 265 SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 4567889999999999999999999999999988764
No 243
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=95.59 E-value=0.012 Score=38.68 Aligned_cols=28 Identities=14% Similarity=-0.025 Sum_probs=24.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+|+..|.+.||+.|||+.++..
T Consensus 257 ~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 257 IEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 4567899999999999999999998863
No 244
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=95.54 E-value=0.011 Score=40.24 Aligned_cols=27 Identities=15% Similarity=-0.010 Sum_probs=23.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcH-----HHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTA-----LRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~-----~~I~ 49 (69)
....+.+||+.||+.||+.|||+ .++.
T Consensus 219 ~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll 250 (318)
T cd05570 219 LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIK 250 (318)
T ss_pred CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHh
Confidence 44679999999999999999999 6664
No 245
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=95.53 E-value=0.013 Score=38.79 Aligned_cols=25 Identities=16% Similarity=-0.064 Sum_probs=22.9
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
..+.+++..|+..||++|||+.++.
T Consensus 282 ~~~~~~i~~~l~~~p~~R~t~~ell 306 (311)
T cd07866 282 PEGLDLLSKLLSLDPYKRLTASDAL 306 (311)
T ss_pred hhHHHHHHHHcccCcccCcCHHHHh
Confidence 5788999999999999999998875
No 246
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=95.51 E-value=0.013 Score=38.86 Aligned_cols=28 Identities=11% Similarity=-0.090 Sum_probs=24.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..|++.||+.|||+.++.+
T Consensus 256 ~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 256 LEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred CChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 4467899999999999999999999874
No 247
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=95.48 E-value=0.0058 Score=40.55 Aligned_cols=30 Identities=7% Similarity=-0.196 Sum_probs=25.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
....+.+||..||+.||+.|||+.++.+.+
T Consensus 222 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 222 FTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred CCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 456799999999999999999997765433
No 248
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=95.46 E-value=0.013 Score=39.22 Aligned_cols=28 Identities=11% Similarity=-0.159 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+||..|++.||.+|||+.+|..
T Consensus 258 ~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 258 LDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 4567899999999999999999999864
No 249
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=95.45 E-value=0.012 Score=39.95 Aligned_cols=27 Identities=15% Similarity=0.015 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.+++..||+.+|+.|||+.++..
T Consensus 286 ~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 286 SDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred ChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 457889999999999999999999874
No 250
>PHA03207 serine/threonine kinase US3; Provisional
Probab=95.41 E-value=0.013 Score=41.16 Aligned_cols=28 Identities=18% Similarity=-0.020 Sum_probs=24.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+..+|..|+..||+.|||+.++..
T Consensus 347 ~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 347 MHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred cchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 4567889999999999999999999864
No 251
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=95.41 E-value=0.019 Score=37.87 Aligned_cols=25 Identities=4% Similarity=-0.229 Sum_probs=20.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALR 47 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~ 47 (69)
....+.++|+.||+.||++||++.+
T Consensus 221 ~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 221 FSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred CCHHHHHHHHHHccCChhHccCCCc
Confidence 3567999999999999999994444
No 252
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=95.38 E-value=0.0087 Score=40.52 Aligned_cols=25 Identities=8% Similarity=-0.109 Sum_probs=21.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALR 47 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~ 47 (69)
....+.+|++.||+.||+.|||+.+
T Consensus 221 ~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 221 LSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 4567899999999999999999665
No 253
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=95.37 E-value=0.013 Score=39.19 Aligned_cols=28 Identities=7% Similarity=-0.068 Sum_probs=24.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+|+..|++.||++|||+.++.+
T Consensus 260 ~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 260 YVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred CChHHHHHHHHHhccCchhccCHHHHhc
Confidence 3456889999999999999999998853
No 254
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=95.36 E-value=0.018 Score=39.14 Aligned_cols=27 Identities=15% Similarity=-0.039 Sum_probs=22.5
Q ss_pred cHHHHHHHHHHhcccCCCCCC-----cHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARP-----TALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rp-----t~~~I~ 49 (69)
....+.+++..||+.||+.|| ++.++.
T Consensus 234 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l 265 (332)
T cd05614 234 IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIK 265 (332)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHH
Confidence 446789999999999999999 555664
No 255
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=95.32 E-value=0.015 Score=39.57 Aligned_cols=36 Identities=17% Similarity=0.104 Sum_probs=27.2
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHH-HHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTAL-RIK 49 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~-~I~ 49 (69)
+.+|.+|.. ....+.+++..||+.||+.||++. ++.
T Consensus 210 ~~~~~~~~~-----~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 210 NDRPHFPRW-----ISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred cCCCCCCCC-----CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 345666653 445789999999999999999875 443
No 256
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=95.28 E-value=0.016 Score=38.89 Aligned_cols=27 Identities=15% Similarity=0.006 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.++|..|++.||+.|||+.++..
T Consensus 263 ~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 263 SEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 456789999999999999999999874
No 257
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=95.26 E-value=0.019 Score=38.39 Aligned_cols=26 Identities=19% Similarity=0.086 Sum_probs=23.0
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
..+.+|+..|...||..|||+.++.+
T Consensus 288 ~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 288 SKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred hHHHHHHHHHhccCcccccCHHHHhc
Confidence 45788999999999999999998853
No 258
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=95.21 E-value=0.023 Score=37.02 Aligned_cols=26 Identities=15% Similarity=0.222 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+..++.+||. +|++|||+.+|.+
T Consensus 235 ~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 235 SDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 3568889999995 9999999998864
No 259
>PHA03212 serine/threonine kinase US3; Provisional
Probab=95.18 E-value=0.018 Score=40.94 Aligned_cols=28 Identities=14% Similarity=-0.077 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.+..+.+||..|++.||+.|||+.++.+
T Consensus 348 ~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 348 LPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 4567999999999999999999999864
No 260
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=95.18 E-value=0.017 Score=38.86 Aligned_cols=28 Identities=11% Similarity=-0.073 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+|+.+|+..||.+|||+.++.+
T Consensus 258 ~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 258 LDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 4457889999999999999999999875
No 261
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=95.17 E-value=0.018 Score=40.00 Aligned_cols=28 Identities=11% Similarity=-0.005 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+||..|++.||+.|||+.++..
T Consensus 260 ~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 260 ATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred CCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 3567899999999999999999999864
No 262
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=95.13 E-value=0.012 Score=39.32 Aligned_cols=28 Identities=11% Similarity=-0.101 Sum_probs=24.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCc-----HHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPT-----ALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt-----~~~I~~ 50 (69)
....+.+|+..||+.||+.||| +.++.+
T Consensus 228 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 228 FSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 4567999999999999999999 777764
No 263
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=95.11 E-value=0.012 Score=39.82 Aligned_cols=27 Identities=7% Similarity=-0.248 Sum_probs=21.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
....+.+++..||+.||+.|||+..+.
T Consensus 216 ~~~~~~~li~~~L~~dp~~R~~~~~~~ 242 (312)
T cd05585 216 FDRDAKDLLIGLLSRDPTRRLGYNGAQ 242 (312)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCHH
Confidence 456799999999999999998754433
No 264
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=95.09 E-value=0.022 Score=37.81 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=25.8
Q ss_pred CCCCCCCCccCccHHHHHHHHHHhcccCCCCCC-----cHHHHH
Q psy10024 11 RPAIPNRWHACKDLHLVLKIMQECWYPVATARP-----TALRIK 49 (69)
Q Consensus 11 RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rp-----t~~~I~ 49 (69)
++.+|..+ ...+.++++.||..||+.|+ ++.++.
T Consensus 214 ~~~~~~~~-----~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 214 KVRFPSFF-----SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred CccCCccC-----CHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 45566543 46799999999999999999 555554
No 265
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=95.08 E-value=0.022 Score=37.66 Aligned_cols=26 Identities=12% Similarity=-0.102 Sum_probs=23.2
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
..+.+++..|++.||+.|||+.++..
T Consensus 262 ~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 262 PHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhHHHHHHHHhccCcccccCHHHHhc
Confidence 57789999999999999999998753
No 266
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=95.07 E-value=0.014 Score=38.84 Aligned_cols=28 Identities=14% Similarity=-0.077 Sum_probs=23.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCc-----HHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPT-----ALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt-----~~~I~~ 50 (69)
....+.+|+..||+.||++||| +.++.+
T Consensus 228 ~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 228 FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 5568999999999999999997 677754
No 267
>KOG1989|consensus
Probab=94.89 E-value=0.052 Score=42.70 Aligned_cols=37 Identities=11% Similarity=0.182 Sum_probs=33.3
Q ss_pred ccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 22 KDLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 22 ~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
+....|..||..|-+.||+.||+..+|...+-+|...
T Consensus 278 ~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 278 NYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred cHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 3667899999999999999999999999999888765
No 268
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=94.85 E-value=0.03 Score=37.61 Aligned_cols=26 Identities=12% Similarity=0.047 Sum_probs=22.9
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
..+.+||..|...||+.|||+.++.+
T Consensus 288 ~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 288 SKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred hHHHHHHHHHhccCcccCCCHHHHhc
Confidence 35788999999999999999999853
No 269
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=94.83 E-value=0.026 Score=37.53 Aligned_cols=28 Identities=11% Similarity=-0.006 Sum_probs=23.6
Q ss_pred cHHHHHHHHHHhcccCCCCCC-----cHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARP-----TALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rp-----t~~~I~~ 50 (69)
....+.++|..||+.||+.|| |+.++.+
T Consensus 222 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 222 FSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred cCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 456899999999999999999 5777654
No 270
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=94.83 E-value=0.019 Score=38.24 Aligned_cols=28 Identities=14% Similarity=-0.081 Sum_probs=23.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCc-----HHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPT-----ALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt-----~~~I~~ 50 (69)
....+.+|+..||+.||+.||| +.++..
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 228 FSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred CCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 4567899999999999999999 666654
No 271
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=94.77 E-value=0.029 Score=38.17 Aligned_cols=27 Identities=11% Similarity=-0.111 Sum_probs=23.7
Q ss_pred cHHHHHHHHHHhcccCCCCCC-----cHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARP-----TALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rp-----t~~~I~ 49 (69)
....+.+++..||+.||+.|| ++.++.
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll 249 (323)
T cd05571 218 LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIM 249 (323)
T ss_pred CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHH
Confidence 456799999999999999999 788875
No 272
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=94.71 E-value=0.029 Score=38.28 Aligned_cols=26 Identities=12% Similarity=0.112 Sum_probs=23.3
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
+.+.+|+..|+..||+.|||+.++..
T Consensus 272 ~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 272 PLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 45789999999999999999999873
No 273
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=94.70 E-value=0.05 Score=35.48 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=27.1
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
+.+|.+|+. ....+.+++++||. +|..|||+.++.
T Consensus 225 ~~~~~~p~~-----~~~~~~~~i~~~l~-~~~~r~~~~~~~ 259 (264)
T cd06653 225 PTKPMLPDG-----VSDACRDFLKQIFV-EEKRRPTAEFLL 259 (264)
T ss_pred CCCCCCCcc-----cCHHHHHHHHHHhc-CcccCccHHHHh
Confidence 345666653 45679999999999 579999999764
No 274
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=94.65 E-value=0.026 Score=38.36 Aligned_cols=27 Identities=15% Similarity=0.099 Sum_probs=22.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHH-HHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTAL-RIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~-~I~ 49 (69)
....+.++|+.||+.||+.|||+. ++.
T Consensus 219 ~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 219 ITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 345789999999999999999974 554
No 275
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=94.53 E-value=0.036 Score=37.92 Aligned_cols=22 Identities=9% Similarity=-0.189 Sum_probs=19.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCc
Q psy10024 23 DLHLVLKIMQECWYPVATARPT 44 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt 44 (69)
....+.+|+..||+.||+.||+
T Consensus 238 ~~~~~~~li~~~L~~dP~~R~~ 259 (329)
T PTZ00263 238 FDGRARDLVKGLLQTDHTKRLG 259 (329)
T ss_pred CCHHHHHHHHHHhhcCHHHcCC
Confidence 3457899999999999999997
No 276
>PHA03211 serine/threonine kinase US3; Provisional
Probab=94.27 E-value=0.04 Score=40.43 Aligned_cols=26 Identities=15% Similarity=0.073 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
..+.+||..|+..||.+|||+.++.+
T Consensus 429 ~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 429 LDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred chHHHHHHHHcccChhhCcCHHHHhh
Confidence 46889999999999999999999864
No 277
>KOG0198|consensus
Probab=94.24 E-value=0.06 Score=38.33 Aligned_cols=37 Identities=22% Similarity=0.354 Sum_probs=29.9
Q ss_pred CCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHH
Q psy10024 10 IRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKT 51 (69)
Q Consensus 10 ~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~ 51 (69)
.=|.||+. ......+.+..|-..||+.||||.++.+-
T Consensus 240 ~~P~ip~~-----ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 240 SLPEIPDS-----LSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred CCCCCCcc-----cCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 44677765 44578999999999999999999998653
No 278
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=94.21 E-value=0.048 Score=36.07 Aligned_cols=22 Identities=18% Similarity=0.027 Sum_probs=19.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCc
Q psy10024 23 DLHLVLKIMQECWYPVATARPT 44 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt 44 (69)
....+.++++.||+.||+.||+
T Consensus 235 ~~~~~~~ll~~~l~~~p~~R~~ 256 (290)
T cd05613 235 MSALAKDIIQRLLMKDPKKRLG 256 (290)
T ss_pred CCHHHHHHHHHHhcCCHHHhcC
Confidence 4567899999999999999984
No 279
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=94.17 E-value=0.038 Score=35.81 Aligned_cols=24 Identities=17% Similarity=-0.097 Sum_probs=21.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTAL 46 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~ 46 (69)
....+.++|..||+.||+.|||+.
T Consensus 201 ~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 201 VSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred CCHHHHHHHHHHccCCHHHhcCCC
Confidence 446789999999999999999973
No 280
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=94.04 E-value=0.051 Score=36.34 Aligned_cols=26 Identities=15% Similarity=-0.003 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhcccCCCCCCc-----HHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPT-----ALRIK 49 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt-----~~~I~ 49 (69)
...+.+||+.||..||..||+ +.++.
T Consensus 222 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l 252 (291)
T cd05612 222 DLYAKDLIKKLLVVDRTRRLGNMKNGADDVK 252 (291)
T ss_pred CHHHHHHHHHHcCCCHHHccCCccCCHHHHh
Confidence 457899999999999999996 66664
No 281
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=94.04 E-value=0.054 Score=37.10 Aligned_cols=23 Identities=4% Similarity=-0.110 Sum_probs=20.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTA 45 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~ 45 (69)
....+.++|..||+.||+.|||+
T Consensus 228 ~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 228 LSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCHHHHHHHHHHhcCCHHHcCCC
Confidence 44678999999999999999995
No 282
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=94.02 E-value=0.043 Score=37.40 Aligned_cols=27 Identities=11% Similarity=0.015 Sum_probs=22.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHH-HHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTAL-RIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~-~I~ 49 (69)
....+.+++..||+.||+.||++. +++
T Consensus 219 ~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 219 LTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred CCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 345789999999999999999996 553
No 283
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=94.00 E-value=0.058 Score=37.22 Aligned_cols=26 Identities=8% Similarity=-0.028 Sum_probs=23.5
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
..+.+|+..|...||..|||+.++.+
T Consensus 292 ~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 292 SQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 46889999999999999999999864
No 284
>PTZ00284 protein kinase; Provisional
Probab=93.98 E-value=0.053 Score=39.06 Aligned_cols=42 Identities=17% Similarity=0.171 Sum_probs=30.2
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHHH--HHHHHHhh-cccCCCCc
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIKK--TIASIILS-DQAVSYPD 66 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~~--~L~~l~~~-~~~~~~~~ 66 (69)
..+.+||..|...||+.|||+.++.+ -+.+.... ...-+|.|
T Consensus 412 ~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~~~~~~~~~~ 456 (467)
T PTZ00284 412 DLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPECRQHPNYPD 456 (467)
T ss_pred HHHHHHHHHhCCcChhhCCCHHHHhcCccccccCCccccCCCCCC
Confidence 45779999999999999999999975 44443332 23455554
No 285
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=93.95 E-value=0.052 Score=44.01 Aligned_cols=27 Identities=19% Similarity=0.183 Sum_probs=24.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
....+.+||..||+.+|+.||||.++.
T Consensus 267 ~S~eL~dLI~~~L~~dPeeRPSa~QlL 293 (1021)
T PTZ00266 267 KSKELNILIKNLLNLSAKERPSALQCL 293 (1021)
T ss_pred CCHHHHHHHHHHhcCChhHCcCHHHHh
Confidence 456799999999999999999999987
No 286
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=93.91 E-value=0.04 Score=36.55 Aligned_cols=23 Identities=4% Similarity=-0.275 Sum_probs=20.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTA 45 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~ 45 (69)
....+.+++..||+.||+.||++
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~ 246 (280)
T cd05608 224 FSPASKSFCEALLAKDPEKRLGF 246 (280)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCC
Confidence 55689999999999999999944
No 287
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=93.88 E-value=0.065 Score=36.48 Aligned_cols=28 Identities=7% Similarity=0.023 Sum_probs=23.5
Q ss_pred cHHHHHHHHHHhcccCCCCCC-----cHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARP-----TALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rp-----t~~~I~~ 50 (69)
....+.++|..||+.||+.|| ++.++..
T Consensus 223 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 223 LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 345789999999999999999 7777654
No 288
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=93.83 E-value=0.071 Score=36.22 Aligned_cols=22 Identities=14% Similarity=-0.017 Sum_probs=19.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCc
Q psy10024 23 DLHLVLKIMQECWYPVATARPT 44 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt 44 (69)
....+.+++..||+.||+.||+
T Consensus 224 ~~~~~~~li~~~L~~dP~~R~~ 245 (324)
T cd05589 224 LSREAISIMRRLLRRNPERRLG 245 (324)
T ss_pred CCHHHHHHHHHHhhcCHhHcCC
Confidence 4567899999999999999994
No 289
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=93.64 E-value=0.071 Score=36.67 Aligned_cols=28 Identities=14% Similarity=0.089 Sum_probs=24.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.++|..|++.||+.|||+.++..
T Consensus 272 ~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 272 ANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred CCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 3457899999999999999999998863
No 290
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=93.52 E-value=0.053 Score=35.82 Aligned_cols=27 Identities=15% Similarity=-0.167 Sum_probs=23.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCc-HHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPT-ALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt-~~~I~ 49 (69)
....+.++|..||+.||++||+ +.++.
T Consensus 233 ~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 233 VSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred cCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 5578999999999999999996 57765
No 291
>KOG0201|consensus
Probab=93.46 E-value=0.15 Score=38.22 Aligned_cols=29 Identities=17% Similarity=0.180 Sum_probs=25.4
Q ss_pred ccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 22 KDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 22 ~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.+...+.+.|.-|-+.||+.||||.++.+
T Consensus 234 ~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 234 DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 45567999999999999999999998853
No 292
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=93.31 E-value=0.071 Score=36.29 Aligned_cols=28 Identities=7% Similarity=-0.099 Sum_probs=24.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||..+|+.|||+.++.+
T Consensus 229 ~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 229 LSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred cCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 3567999999999999999999999874
No 293
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=93.03 E-value=0.1 Score=35.70 Aligned_cols=23 Identities=4% Similarity=-0.138 Sum_probs=20.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTA 45 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~ 45 (69)
....+.+++..|++.||..|+|+
T Consensus 228 ~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 228 LSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred CCHHHHHHHHHHhccCHHHcCCC
Confidence 44578999999999999999983
No 294
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=92.99 E-value=0.072 Score=36.34 Aligned_cols=28 Identities=7% Similarity=-0.103 Sum_probs=23.7
Q ss_pred cHHHHHHHHHHhcccCCCCCC-----cHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARP-----TALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rp-----t~~~I~~ 50 (69)
....+.++|..||+.||+.|| ++.++.+
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 218 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 456899999999999999998 7777653
No 295
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=92.98 E-value=0.076 Score=36.03 Aligned_cols=26 Identities=12% Similarity=-0.089 Sum_probs=23.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
....+.+|++.|+. ||+.|||+.++.
T Consensus 236 ~~~~~~~li~~ll~-~p~~R~t~~~l~ 261 (330)
T cd05601 236 VSSDFLDLIQSLLC-GQKERLGYEGLC 261 (330)
T ss_pred CCHHHHHHHHHHcc-ChhhCCCHHHHh
Confidence 45689999999997 999999999886
No 296
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=92.97 E-value=0.09 Score=35.74 Aligned_cols=28 Identities=11% Similarity=-0.084 Sum_probs=24.0
Q ss_pred cHHHHHHHHHHhcccCCCCCC-----cHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARP-----TALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rp-----t~~~I~~ 50 (69)
....+.++++.||+.||+.|+ ++.++.+
T Consensus 219 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 219 LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 456799999999999999997 8888753
No 297
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=92.95 E-value=0.11 Score=34.50 Aligned_cols=27 Identities=7% Similarity=-0.145 Sum_probs=23.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
......+|+..|...||.+|||+.++.
T Consensus 257 ~~~~~~dll~~mL~~dp~~R~t~~~~l 283 (288)
T cd07871 257 LDTDGIDLLSSLLLYETKSRISAEAAL 283 (288)
T ss_pred CCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 345788999999999999999999985
No 298
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=92.78 E-value=0.11 Score=35.50 Aligned_cols=28 Identities=11% Similarity=-0.062 Sum_probs=24.1
Q ss_pred cHHHHHHHHHHhcccCCCCCC-----cHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARP-----TALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rp-----t~~~I~~ 50 (69)
....+.+++..|+..||+.|+ |+.++.+
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 218 LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 446799999999999999997 8888864
No 299
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=92.73 E-value=0.097 Score=35.64 Aligned_cols=24 Identities=17% Similarity=0.055 Sum_probs=21.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTAL 46 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~ 46 (69)
....+.+++..|++.||+.|||+.
T Consensus 219 ~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 219 LSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred CCHHHHHHHHHHcccCHHHCCCCC
Confidence 446789999999999999999983
No 300
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=92.72 E-value=0.13 Score=34.06 Aligned_cols=28 Identities=11% Similarity=-0.021 Sum_probs=24.5
Q ss_pred cHHHHHHHHHHhcccCCCCCC-----cHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARP-----TALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rp-----t~~~I~~ 50 (69)
....+.+++.+|+..+|+.|| |+.++.+
T Consensus 222 ~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 222 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 346799999999999999999 8888864
No 301
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=92.65 E-value=0.11 Score=35.69 Aligned_cols=27 Identities=19% Similarity=0.124 Sum_probs=24.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
....+.+++..|.+.||+.|||+.++.
T Consensus 270 ~~~~~~~li~~~l~~dP~~R~t~~~~l 296 (343)
T cd07880 270 ANPLAVNVLEKMLVLDAESRITAAEAL 296 (343)
T ss_pred CChHHHHHHHHHcCCChhhCCCHHHHh
Confidence 445789999999999999999999987
No 302
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=92.55 E-value=0.095 Score=35.60 Aligned_cols=27 Identities=11% Similarity=-0.047 Sum_probs=23.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCc-HHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPT-ALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt-~~~I~~ 50 (69)
....+.++|..|+. ||..||+ +.++.+
T Consensus 257 ~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 257 VSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred CCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 45789999999997 9999999 999875
No 303
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=92.48 E-value=0.1 Score=35.48 Aligned_cols=23 Identities=9% Similarity=-0.097 Sum_probs=20.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTA 45 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~ 45 (69)
....+.+++..||+.||..|+++
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 224 LSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCHHHHHHHHHHhhcCHHHcCCC
Confidence 45678999999999999999986
No 304
>KOG0582|consensus
Probab=92.13 E-value=0.14 Score=38.74 Aligned_cols=28 Identities=21% Similarity=0.267 Sum_probs=24.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..|-..||++||||.++.+
T Consensus 265 ~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 265 FSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred hcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 5568899999999999999999999853
No 305
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=91.14 E-value=0.2 Score=34.00 Aligned_cols=23 Identities=9% Similarity=-0.181 Sum_probs=19.9
Q ss_pred cHHHHHHHHHHhcccCCCCCCcH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTA 45 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~ 45 (69)
....+.++++.||+.||..||++
T Consensus 221 ~~~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 221 LSDEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred CCHHHHHHHHHHcCCCHHHCCCC
Confidence 45678999999999999999953
No 306
>PLN00181 protein SPA1-RELATED; Provisional
Probab=91.03 E-value=0.22 Score=38.49 Aligned_cols=24 Identities=13% Similarity=0.069 Sum_probs=21.5
Q ss_pred HHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 26 LVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 26 ~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
....++..||+.||..|||+.+|.
T Consensus 240 ~~~~~~~~~L~~~P~~Rps~~eil 263 (793)
T PLN00181 240 KEASFCLWLLHPEPSCRPSMSELL 263 (793)
T ss_pred HHHHHHHHhCCCChhhCcChHHHh
Confidence 456888999999999999999985
No 307
>KOG0579|consensus
Probab=90.72 E-value=0.16 Score=40.62 Aligned_cols=30 Identities=20% Similarity=0.524 Sum_probs=26.3
Q ss_pred CCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 15 PNRWHACKDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 15 p~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
|..|.. .+++.+..|-..||.+||++.++.
T Consensus 258 PS~Ws~-----~F~DfLk~cL~Knp~~Rp~aaqll 287 (1187)
T KOG0579|consen 258 PSHWSR-----SFSDFLKRCLVKNPRNRPPAAQLL 287 (1187)
T ss_pred cchhhh-----HHHHHHHHHHhcCCccCCCHHHHh
Confidence 666654 699999999999999999999985
No 308
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=90.61 E-value=0.21 Score=38.10 Aligned_cols=28 Identities=11% Similarity=-0.111 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
....+.+++..||..||+.||||.++..
T Consensus 606 ~~~~~~~~l~~lL~~dP~~R~ta~e~l~ 633 (669)
T cd05610 606 LSVNAQNAIEILLTMDPTKRAGLKELKQ 633 (669)
T ss_pred CCHHHHHHHHHHcccChhHCcCHHHHHh
Confidence 4567889999999999999999999975
No 309
>KOG0581|consensus
Probab=90.45 E-value=0.38 Score=35.20 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=31.1
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
.+.=|.+|.. .+.+++...+..|-..||.+|||+.++.
T Consensus 296 ~~ppP~lP~~----~fS~ef~~FV~~CL~Kdp~~R~s~~qLl 333 (364)
T KOG0581|consen 296 DEPPPRLPEG----EFSPEFRSFVSCCLRKDPSERPSAKQLL 333 (364)
T ss_pred cCCCCCCCcc----cCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 4556677765 3456899999999999999999999985
No 310
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=90.44 E-value=0.19 Score=34.04 Aligned_cols=27 Identities=15% Similarity=0.000 Sum_probs=22.8
Q ss_pred cHHHHHHHHHHhcccCCCCCC-------cHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARP-------TALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rp-------t~~~I~ 49 (69)
....+.+++..|++.||+.|| ++.++.
T Consensus 219 ~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~ 252 (321)
T cd05591 219 LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIK 252 (321)
T ss_pred CCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHh
Confidence 346799999999999999999 666665
No 311
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=90.02 E-value=0.31 Score=33.25 Aligned_cols=23 Identities=4% Similarity=-0.130 Sum_probs=20.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTA 45 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~ 45 (69)
....+.+++..|++.||+.|+++
T Consensus 226 ~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 226 LSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCHHHHHHHHHHhccCHHHcCCC
Confidence 34678999999999999999984
No 312
>PHA03210 serine/threonine kinase US3; Provisional
Probab=88.82 E-value=0.31 Score=35.77 Aligned_cols=28 Identities=11% Similarity=-0.213 Sum_probs=24.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.+..+.+++..|-..||..|||+.++..
T Consensus 426 ~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 426 LPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred CChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 4456788899999999999999999963
No 313
>KOG1187|consensus
Probab=88.58 E-value=0.87 Score=32.60 Aligned_cols=35 Identities=20% Similarity=0.436 Sum_probs=30.0
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHh
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIIL 57 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~ 57 (69)
....+..+...|=+.+|..||++.+|.+.|+.+..
T Consensus 320 ~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 320 EVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 55668889999999999999999999998866543
No 314
>KOG0589|consensus
Probab=88.27 E-value=0.59 Score=34.80 Aligned_cols=35 Identities=14% Similarity=0.242 Sum_probs=29.1
Q ss_pred CCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHH
Q psy10024 12 PAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKT 51 (69)
Q Consensus 12 P~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~ 51 (69)
.++|.. ...+|..||+.|-..+|+.|||+.++...
T Consensus 224 ~Plp~~-----ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 SPLPSM-----YSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCCcc-----ccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 455554 44579999999999999999999999866
No 315
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=88.15 E-value=0.62 Score=37.68 Aligned_cols=36 Identities=8% Similarity=0.052 Sum_probs=29.0
Q ss_pred cHHHHHHHHHHhcccCCCCCC-cHHHHHHHHHHHHhh
Q psy10024 23 DLHLVLKIMQECWYPVATARP-TALRIKKTIASIILS 58 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rp-t~~~I~~~L~~l~~~ 58 (69)
.+..+.+++..||+.||+.|| ++.++.+.|+.+...
T Consensus 257 iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 257 IPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 557899999999999999996 566677777776543
No 316
>KOG0596|consensus
Probab=87.81 E-value=0.46 Score=37.02 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=21.5
Q ss_pred HHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 26 LVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 26 ~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
++.++|..|-.-||..|||--++.
T Consensus 602 ~li~~mK~CL~rdPkkR~si~eLL 625 (677)
T KOG0596|consen 602 ELIDVMKCCLARDPKKRWSIPELL 625 (677)
T ss_pred HHHHHHHHHHhcCcccCCCcHHHh
Confidence 399999999999999999987764
No 317
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=87.47 E-value=0.52 Score=31.95 Aligned_cols=24 Identities=13% Similarity=-0.126 Sum_probs=21.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTAL 46 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~ 46 (69)
....+.++++.|++.||+.||++.
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 219 ISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCHHHHHHHHHHhhcCHHhCCCCC
Confidence 356799999999999999999985
No 318
>KOG0661|consensus
Probab=86.85 E-value=0.64 Score=35.49 Aligned_cols=28 Identities=14% Similarity=0.048 Sum_probs=24.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+..+||.+|-.-||+.||||.+..+
T Consensus 263 ~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 263 ASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred cCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 5678899999999999999999998753
No 319
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=86.78 E-value=0.24 Score=33.64 Aligned_cols=26 Identities=12% Similarity=-0.118 Sum_probs=22.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRI 48 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I 48 (69)
....+.++++.|++.||+.||++.+.
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (325)
T cd05602 219 ITNSARHLLEGLLQKDRTKRLGAKDD 244 (325)
T ss_pred CCHHHHHHHHHHcccCHHHCCCCCCC
Confidence 45679999999999999999998743
No 320
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=85.02 E-value=0.67 Score=32.07 Aligned_cols=27 Identities=19% Similarity=0.057 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhcccCCCCCC-----cHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARP-----TALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rp-----t~~~I~~ 50 (69)
...+.++|..|++.||+.|+ |+.++++
T Consensus 252 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 252 DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 45689999999999999995 7887754
No 321
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=84.10 E-value=0.8 Score=30.95 Aligned_cols=24 Identities=8% Similarity=-0.121 Sum_probs=20.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTAL 46 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~ 46 (69)
....+.+++..|++.||..||++.
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 219 KTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCHHHHHHHHHHccCCHhhcCCCC
Confidence 345789999999999999999864
No 322
>KOG4645|consensus
Probab=83.68 E-value=0.73 Score=38.87 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=31.3
Q ss_pred ecCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 6 CLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 6 v~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
|..|.-|.||.+.. .+=.+-++.|-.+||+.|-++.++.+
T Consensus 1454 V~~gh~Pq~P~~ls-----~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1454 VAAGHKPQIPERLS-----SEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HhccCCCCCchhhh-----HhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 45688899998733 34477899999999999988886643
No 323
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=83.29 E-value=1 Score=30.58 Aligned_cols=23 Identities=9% Similarity=-0.119 Sum_probs=20.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTA 45 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~ 45 (69)
....+.+|+..|++.||+.|+++
T Consensus 224 ~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 224 MSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCHHHHHHHHHHcccCHHhcCCC
Confidence 45678999999999999999985
No 324
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=82.09 E-value=1.4 Score=33.33 Aligned_cols=24 Identities=8% Similarity=-0.061 Sum_probs=21.5
Q ss_pred HHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 27 VLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 27 l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
..+|+..|-..||+.|||+.++.+
T Consensus 426 ~~dLi~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 426 GWELLKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred HHHHHHHHccCCcccCCCHHHHhC
Confidence 458999999999999999999864
No 325
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=80.61 E-value=1.5 Score=29.90 Aligned_cols=23 Identities=9% Similarity=-0.089 Sum_probs=20.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTA 45 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~ 45 (69)
....+.+++..|++.||+.|+++
T Consensus 224 ~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 224 LSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCHHHHHHHHHHcccCHhhCCCC
Confidence 34578999999999999999985
No 326
>cd00059 FH Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as monomers, are also found in the Hepatocyte nuclear factor (HNF) proteins, which provide tissue-specific gene regulation. The structure contains 2 flexible loops or "wings" in the C-terminal region, hence the term winged helix.
Probab=80.09 E-value=4 Score=23.43 Aligned_cols=29 Identities=17% Similarity=0.027 Sum_probs=26.1
Q ss_pred HHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 27 VLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 27 l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
+..||...-...|+.+.|..+|.+-+..-
T Consensus 6 Y~~LI~~Ai~~sp~~~lTL~eIy~~I~~~ 34 (78)
T cd00059 6 YSALIAMAIQSSPEKRLTLSEIYKWISDN 34 (78)
T ss_pred HHHHHHHHHHhCCCCCeeHHHHHHHHHHh
Confidence 78899999999999999999999988764
No 327
>KOG0591|consensus
Probab=78.65 E-value=2.4 Score=30.95 Aligned_cols=34 Identities=15% Similarity=0.267 Sum_probs=25.7
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcH
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTA 45 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~ 45 (69)
+|-=|++|.. -....+.+||.-|-+.||+.||+-
T Consensus 242 qgd~~~~p~~----~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 242 QGDYPPLPDE----HYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred cCCCCCCcHH----HhhhHHHHHHHHHccCCcccCCCc
Confidence 4555666632 244579999999999999999983
No 328
>KOG4279|consensus
Probab=78.21 E-value=2.4 Score=34.58 Aligned_cols=38 Identities=21% Similarity=0.427 Sum_probs=28.4
Q ss_pred cCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 7 LDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 7 ~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
..+.-|+||.. ...+-...|-.|...||..||+|.++.
T Consensus 793 myKvHP~iPee-----lsaeak~FilrcFepd~~~R~sA~~LL 830 (1226)
T KOG4279|consen 793 MYKVHPPIPEE-----LSAEAKNFILRCFEPDPCDRPSAKDLL 830 (1226)
T ss_pred ceecCCCCcHH-----HHHHHHHHHHHHcCCCcccCccHHHhc
Confidence 34555666654 334456789999999999999999875
No 329
>KOG0578|consensus
Probab=77.45 E-value=3 Score=32.17 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=32.0
Q ss_pred cCCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 7 LDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 7 ~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
..+-+|.|.. .+.....|.+.+..|-..|+++|+||.++.
T Consensus 482 a~ng~P~lk~---~~klS~~~kdFL~~cL~~dv~~RasA~eLL 521 (550)
T KOG0578|consen 482 ATNGTPKLKN---PEKLSPELKDFLDRCLVVDVEQRASAKELL 521 (550)
T ss_pred hhcCCCCcCC---ccccCHHHHHHHHHHhhcchhcCCCHHHHh
Confidence 3455676654 234667899999999999999999999985
No 330
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=75.89 E-value=1 Score=30.61 Aligned_cols=24 Identities=17% Similarity=-0.025 Sum_probs=20.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTAL 46 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~ 46 (69)
....+.+++..|+..||+.||++.
T Consensus 219 ~~~~~~~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 219 ASLTAWSILEELLEKDRQRRLGAK 242 (325)
T ss_pred CCHHHHHHHHHHhccCHHhcCCCC
Confidence 345788999999999999999875
No 331
>smart00339 FH FORKHEAD. FORKHEAD, also known as a "winged helix"
Probab=74.80 E-value=6.8 Score=22.95 Aligned_cols=30 Identities=17% Similarity=0.099 Sum_probs=25.8
Q ss_pred HHHHHHHhcccCCCCCCcHHHHHHHHHHHH
Q psy10024 27 VLKIMQECWYPVATARPTALRIKKTIASII 56 (69)
Q Consensus 27 l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~ 56 (69)
++.||...-...|+.++|..+|.+-++...
T Consensus 6 Y~~lI~~ai~~sp~~~ltl~~Iy~~I~~~~ 35 (89)
T smart00339 6 YIALIAMAILSSPDKRLTLSEIYKWIEDNF 35 (89)
T ss_pred HHHHHHHHHHhCCCCCeeHHHHHHHHHHhC
Confidence 788888888889999999999999887643
No 332
>KOG1035|consensus
Probab=74.17 E-value=2.7 Score=35.40 Aligned_cols=46 Identities=15% Similarity=0.237 Sum_probs=30.5
Q ss_pred ceeeecCCC-CCCCCCC---CccCccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 2 RKVVCLDQI-RPAIPNR---WHACKDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 2 ~~~Vv~~~~-RP~ip~~---~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
.++.+-.++ ++.||.. |. +-.+.=+.+|+-.-++||++||||.++.
T Consensus 820 ERa~iL~~LR~g~iP~~~~f~~--~~~~~e~slI~~Ll~hdP~kRPtA~eLL 869 (1351)
T KOG1035|consen 820 ERASILTNLRKGSIPEPADFFD--PEHPEEASLIRWLLSHDPSKRPTATELL 869 (1351)
T ss_pred HHHHHHHhcccCCCCCCccccc--ccchHHHHHHHHHhcCCCccCCCHHHHh
Confidence 334444455 4566654 32 2233457788888999999999999885
No 333
>PF14756 Pdase_C33_assoc: Peptidase_C33-associated domain
Probab=74.12 E-value=9.2 Score=24.35 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=27.8
Q ss_pred HHHHHHHHH-hcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 25 HLVLKIMQE-CWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 25 ~~l~~Lm~~-CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
-.|.++|++ |-++|-.+|-|-.+|...++.....
T Consensus 76 islcqvie~ccc~qnktnr~tpeeva~kidqYlrg 110 (147)
T PF14756_consen 76 ISLCQVIEECCCSQNKTNRATPEEVAAKIDQYLRG 110 (147)
T ss_pred HHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhc
Confidence 356778888 4789999999999999988876554
No 334
>KOG0671|consensus
Probab=73.80 E-value=3.5 Score=30.72 Aligned_cols=29 Identities=7% Similarity=-0.093 Sum_probs=25.3
Q ss_pred CccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 21 CKDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 21 ~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
+.-...|.+||+..-..||++|+|+.++.
T Consensus 376 d~e~~~LfDLl~~mL~fDP~~RiTl~EAL 404 (415)
T KOG0671|consen 376 DLEHVQLFDLLRRMLEFDPARRITLREAL 404 (415)
T ss_pred cHHHhHHHHHHHHHHccCccccccHHHHh
Confidence 34556799999999999999999999875
No 335
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=73.78 E-value=5.1 Score=27.90 Aligned_cols=28 Identities=18% Similarity=0.106 Sum_probs=22.9
Q ss_pred cHHHHHHHHHH--hcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQE--CWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~--CW~~dP~~Rpt~~~I~~ 50 (69)
......+||.. |+..++..|+|+.+|+.
T Consensus 275 ~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 275 LSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred CCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 44678889988 77888888999999964
No 336
>KOG1027|consensus
Probab=69.70 E-value=6.8 Score=31.88 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=28.8
Q ss_pred HHHHHHHHhcccCCCCCCcHHHHH---------HHHHHHHhhcc
Q psy10024 26 LVLKIMQECWYPVATARPTALRIK---------KTIASIILSDQ 60 (69)
Q Consensus 26 ~l~~Lm~~CW~~dP~~Rpt~~~I~---------~~L~~l~~~~~ 60 (69)
+=.+||.+.-+.+|..||||.+|. ++|.-|+.-.+
T Consensus 742 eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ekrL~Fl~dvSD 785 (903)
T KOG1027|consen 742 EAKDLISRMLNPDPQLRPSATDVLNHPLFWDSEKRLSFLRDVSD 785 (903)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHhCCCccCChHHHHHHHHhhhh
Confidence 567899999999999999999995 67776665433
No 337
>PF00250 Fork_head: Fork head domain; InterPro: IPR001766 The fork head protein of Drosophila melanogaster, a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors []. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [, , ]. The fork head domain binds B-DNA as a monomer [], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2UZK_A 2K86_A 1JXS_A 2C6Y_A 2A3S_A 2D2W_A 2KIU_A 1VTN_C 2A07_J 2AS5_F ....
Probab=68.98 E-value=7.1 Score=23.14 Aligned_cols=29 Identities=14% Similarity=0.024 Sum_probs=25.7
Q ss_pred HHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 27 VLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 27 l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
+..||...-...|+.++|..+|.+-+..-
T Consensus 6 Y~~LI~~Ai~~sp~~~Ltl~eIy~~i~~~ 34 (96)
T PF00250_consen 6 YATLIAMAILSSPDKRLTLSEIYEWIEEN 34 (96)
T ss_dssp HHHHHHHHHHTSTTSEBEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCccHHHHHHHHHHh
Confidence 78888888888999999999999988764
No 338
>KOG0575|consensus
Probab=68.95 E-value=4.8 Score=31.32 Aligned_cols=25 Identities=12% Similarity=0.216 Sum_probs=22.3
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
..=.+||...-+.||+.|||+.+|.
T Consensus 243 ~~A~dLI~~lL~~~P~~Rpsl~~vL 267 (592)
T KOG0575|consen 243 AEAKDLIRKLLRPNPSERPSLDEVL 267 (592)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHh
Confidence 3457899999999999999999996
No 339
>KOG0615|consensus
Probab=68.74 E-value=5.9 Score=30.00 Aligned_cols=39 Identities=15% Similarity=0.076 Sum_probs=30.7
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
|.=+-.|+.|.. +.++-..||...-.-||++|||+.+..
T Consensus 397 G~y~f~p~~w~~--Iseea~dlI~~mL~VdP~~R~s~~eaL 435 (475)
T KOG0615|consen 397 GRYAFGPLQWDR--ISEEALDLINWMLVVDPENRPSADEAL 435 (475)
T ss_pred CcccccChhhhh--hhHHHHHHHHHhhEeCcccCcCHHHHh
Confidence 444455666753 667788999999999999999999874
No 340
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=66.81 E-value=5.3 Score=27.86 Aligned_cols=28 Identities=11% Similarity=-0.065 Sum_probs=24.2
Q ss_pred cHHHHHHHHHHhcccCCCC--CCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATA--RPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~--Rpt~~~I~~ 50 (69)
....+.+||..|...+|.. |+|+.++.+
T Consensus 274 ~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 274 ISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 4578999999999999987 999999853
No 341
>KOG0603|consensus
Probab=66.37 E-value=5.8 Score=31.00 Aligned_cols=27 Identities=15% Similarity=-0.056 Sum_probs=23.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
+...-++|++.|-+-||..|||+.+|.
T Consensus 535 vS~~AKdLl~~LL~~dP~~Rl~~~~i~ 561 (612)
T KOG0603|consen 535 VSDEAKDLLQQLLQVDPALRLGADEIG 561 (612)
T ss_pred cCHHHHHHHHHhccCChhhCcChhhhc
Confidence 445678999999999999999999985
No 342
>KOG0593|consensus
Probab=65.44 E-value=7.9 Score=28.57 Aligned_cols=27 Identities=11% Similarity=0.235 Sum_probs=23.3
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
....+.++|..|-+.||+.|+|-.++.
T Consensus 256 ~s~~~ld~~k~cL~~dP~~R~sc~qll 282 (396)
T KOG0593|consen 256 ISNVLLDLLKKCLKMDPDDRLSCEQLL 282 (396)
T ss_pred chHHHHHHHHHHhcCCccccccHHHHh
Confidence 455788999999999999999987764
No 343
>KOG0583|consensus
Probab=63.18 E-value=13 Score=26.70 Aligned_cols=42 Identities=17% Similarity=0.084 Sum_probs=31.3
Q ss_pred CCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHh
Q psy10024 11 RPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIIL 57 (69)
Q Consensus 11 RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~ 57 (69)
+..+|.... ..+...|+..|-..||..|+|..+|. .-.-++.
T Consensus 239 ~~~~p~~~~----S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~~ 280 (370)
T KOG0583|consen 239 EFKIPSYLL----SPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQK 280 (370)
T ss_pred CccCCCCcC----CHHHHHHHHHHcCCCcccCCCHHHHh-hChhhcc
Confidence 345565321 45789999999999999999999998 4444443
No 344
>COG3084 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.61 E-value=16 Score=21.46 Aligned_cols=33 Identities=15% Similarity=0.352 Sum_probs=23.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcc
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~ 60 (69)
-..++.+|++--|+.+|+ ..+.+.|.++..+..
T Consensus 5 rlnevlellqp~w~k~~d-----lnl~q~lqkla~eag 37 (88)
T COG3084 5 RLNEVIELLQPAWQKEPD-----LNLLQFLQKLAKESG 37 (88)
T ss_pred HHHHHHHHhhHHhccCCC-----ccHHHHHHHHHHHhc
Confidence 356788999999999998 345566666665543
No 345
>KOG0599|consensus
Probab=62.59 E-value=6.2 Score=28.90 Aligned_cols=32 Identities=19% Similarity=0.091 Sum_probs=26.4
Q ss_pred CCCccCccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 16 NRWHACKDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 16 ~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
+.|.+ ......+||.+|-.-||++|.|+.+..
T Consensus 250 peWad--is~~~KdLIsrlLqVdp~~Ritake~L 281 (411)
T KOG0599|consen 250 PEWAD--ISATVKDLISRLLQVDPTKRITAKEAL 281 (411)
T ss_pred cchhh--ccccHHHHHHHHHeeCchhcccHHHHh
Confidence 44654 456789999999999999999999875
No 346
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=59.42 E-value=12 Score=25.69 Aligned_cols=27 Identities=15% Similarity=-0.015 Sum_probs=21.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCc---HHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPT---ALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt---~~~I~~ 50 (69)
....+.++|..|.. +|..|++ +.++.+
T Consensus 266 ~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 266 LSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 45688999999996 9999998 666643
No 347
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=56.27 E-value=16 Score=24.81 Aligned_cols=40 Identities=13% Similarity=0.040 Sum_probs=26.1
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCCC--CCcHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVATA--RPTALRIKK 50 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~--Rpt~~~I~~ 50 (69)
+.|+.+|+.+. .....+.+++..|...++.. |+++.++++
T Consensus 224 ~~~~~~p~~~~--~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 224 EERFQFPSHIT--DVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred CCcccCCCccc--cCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 44566666543 25678999999999865543 456766653
No 348
>KOG0659|consensus
Probab=55.79 E-value=11 Score=27.30 Aligned_cols=28 Identities=18% Similarity=0.037 Sum_probs=24.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.....-+||...|..||-+|+|+.+..+
T Consensus 253 as~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 253 ASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred ccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 4456789999999999999999998754
No 349
>KOG4158|consensus
Probab=53.60 E-value=19 Score=27.70 Aligned_cols=40 Identities=13% Similarity=0.162 Sum_probs=31.3
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
+.+=|++|+. +++.+.+|+.+--..||++|++..-....|
T Consensus 472 e~qLPalp~~-----vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 472 ESQLPALPSR-----VPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred hhhCCCCccc-----CChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 4456888875 667899999999999999999976544333
No 350
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=52.82 E-value=19 Score=24.84 Aligned_cols=28 Identities=14% Similarity=0.169 Sum_probs=20.0
Q ss_pred cHHHHHHHHHH--hcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQE--CWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~--CW~~dP~~Rpt~~~I~~ 50 (69)
......+++.. |+..++..||++.+|++
T Consensus 263 ~s~~~~~li~~l~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 263 ISEKAKDLILRFCCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCHHHHHHHHHHcCChhhcCCCCCHHHHhC
Confidence 34567777776 65566677899999975
No 351
>KOG0592|consensus
Probab=51.54 E-value=20 Score=28.04 Aligned_cols=28 Identities=14% Similarity=0.039 Sum_probs=24.5
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
.++..++|++.--.-||..|+|..+|+.
T Consensus 310 fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 310 FPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred CCHHHHHHHHHHHccCccccccHHHHhh
Confidence 4567899999999999999999988864
No 352
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=49.85 E-value=24 Score=23.98 Aligned_cols=41 Identities=7% Similarity=0.001 Sum_probs=25.7
Q ss_pred CCCCCCCCCCccCccHHHHHHHHHHhcccCCC--CCCcHHHHHHH
Q psy10024 9 QIRPAIPNRWHACKDLHLVLKIMQECWYPVAT--ARPTALRIKKT 51 (69)
Q Consensus 9 ~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~--~Rpt~~~I~~~ 51 (69)
+.+..+|..+. .+...+.+||..|-..++. .|+|+.++++-
T Consensus 224 ~~~~~~p~~~~--~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 224 KERFQFPAQVT--DVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CccccCCCccc--cCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 34555555432 2456889999998755443 36788887643
No 353
>KOG0033|consensus
Probab=49.27 E-value=17 Score=26.36 Aligned_cols=31 Identities=13% Similarity=0.065 Sum_probs=25.8
Q ss_pred CCccCccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 17 RWHACKDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 17 ~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
.|++ +.++-..|+++.-..||..|.|+.+..
T Consensus 235 ~w~~--is~~Ak~LvrrML~~dP~kRIta~EAL 265 (355)
T KOG0033|consen 235 EWDT--VTPEAKSLIRRMLTVNPKKRITADEAL 265 (355)
T ss_pred ccCc--CCHHHHHHHHHHhccChhhhccHHHHh
Confidence 5654 557789999999999999999998763
No 354
>KOG0032|consensus
Probab=47.60 E-value=27 Score=25.40 Aligned_cols=28 Identities=11% Similarity=-0.099 Sum_probs=25.4
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
......+++..+-..||..|+|+.++.+
T Consensus 265 is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 265 ISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred cCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 4578899999999999999999999876
No 355
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=46.97 E-value=14 Score=25.48 Aligned_cols=26 Identities=19% Similarity=-0.065 Sum_probs=21.1
Q ss_pred cHHHHHHHHHHhcccCCCCCC---cHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARP---TALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rp---t~~~I~ 49 (69)
....+.+++..|+ .+|+.|+ |+.++.
T Consensus 271 ~s~~~~~li~~l~-~~p~~R~~~~t~~ell 299 (376)
T cd05598 271 LSREASDLILRLC-CGAEDRLGKNGADEIK 299 (376)
T ss_pred CCHHHHHHHHHHh-cCHhhcCCCCCHHHHh
Confidence 4567888998887 4999999 788875
No 356
>KOG0667|consensus
Probab=46.92 E-value=18 Score=28.19 Aligned_cols=27 Identities=19% Similarity=0.222 Sum_probs=23.8
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
.-..+.+++..|-+-||..|+|+.+..
T Consensus 474 ~~~~F~dflk~~L~~dP~~R~tp~qal 500 (586)
T KOG0667|consen 474 DDKLFIDFLKRCLEWDPAERITPAQAL 500 (586)
T ss_pred cHHHHHHHHHHHhccCchhcCCHHHHh
Confidence 345789999999999999999999875
No 357
>PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyse alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. ; PDB: 2Y4S_A 2FH8_A 2FH6_A 2Y5E_A 2FHC_A 2FHB_A 2FHF_A 2FGZ_A.
Probab=44.38 E-value=23 Score=23.29 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=23.5
Q ss_pred CCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 14 IPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 14 ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
+|+.+.+..-...+..|+ .||..+|+..+|....+.++..
T Consensus 11 LP~~~kn~~~W~~i~~ll-----~d~~~kP~~~~I~~a~~~f~el 50 (168)
T PF11852_consen 11 LPPADKNGDNWPLIRPLL-----ADPALKPSPADIAAASAYFQEL 50 (168)
T ss_dssp ---HHHHGGGHHHHHHHH-----CTCCGS--HHHHHHHHHHHHHH
T ss_pred CCcccccccchhhhhhhc-----cCCccCCCHHHHHHHHHHHHHH
Confidence 455444444555666677 8999999999997665554433
No 358
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=42.87 E-value=41 Score=22.82 Aligned_cols=28 Identities=7% Similarity=-0.065 Sum_probs=19.2
Q ss_pred cHHHHHHHHHHhc--ccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECW--YPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW--~~dP~~Rpt~~~I~~ 50 (69)
....+.++|+.|- ..++..|+++.++.+
T Consensus 236 ~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 236 VSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred CCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 4567899999865 444445778877754
No 359
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=42.15 E-value=81 Score=24.69 Aligned_cols=48 Identities=21% Similarity=0.157 Sum_probs=38.4
Q ss_pred CCCCccCccHHHHHHHHHHhccc--CCCCCCcHHHHHHHHHHHHhhcccC
Q psy10024 15 PNRWHACKDLHLVLKIMQECWYP--VATARPTALRIKKTIASIILSDQAV 62 (69)
Q Consensus 15 p~~~~~~~~~~~l~~Lm~~CW~~--dP~~Rpt~~~I~~~L~~l~~~~~~~ 62 (69)
|..|+-.-.++.+..|..+|... +++-|||+..-...|..+..++.++
T Consensus 258 P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C 307 (637)
T COG4248 258 PRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKC 307 (637)
T ss_pred CCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhh
Confidence 34465555778999999999975 4678999999999999998887644
No 360
>PF06288 DUF1040: Protein of unknown function (DUF1040); InterPro: IPR009383 This family consists of several bacterial YihD proteins of unknown function [].; PDB: 2KO6_A.
Probab=40.34 E-value=38 Score=20.09 Aligned_cols=30 Identities=13% Similarity=0.347 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhh
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
..++.+|++.-|+.+|+-+ +.+.|.++..+
T Consensus 6 ~nELLELL~p~Wqk~pDLn-----L~Q~LqkLa~e 35 (86)
T PF06288_consen 6 LNELLELLQPAWQKEPDLN-----LMQFLQKLAQE 35 (86)
T ss_dssp HHHHHHHTHHHHHSSTTS------HHHHHHHHHHH
T ss_pred HHHHHHHhhHHHhcCCccc-----HHHHHHHHHHh
Confidence 4578899999999999965 44555555544
No 361
>PF08769 Spo0A_C: Sporulation initiation factor Spo0A C terminal; InterPro: IPR014879 The response regulator Spo0A is comprised of a phophoacceptor domain and a transcription activation domain. This domain corresponds to the transcription activation domain and forms an alpha helical structure comprising of 6 alpha helices. The structure contains a helix-turn-helix and binds DNA [, ]. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0005509 calcium ion binding, 0006355 regulation of transcription, DNA-dependent, 0042173 regulation of sporulation resulting in formation of a cellular spore, 0005737 cytoplasm; PDB: 1FC3_C 1LQ1_D.
Probab=39.62 E-value=57 Score=19.62 Aligned_cols=32 Identities=13% Similarity=0.221 Sum_probs=21.9
Q ss_pred cHHHHHHHHHHhcc-cCC--------------CCCCcHHHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWY-PVA--------------TARPTALRIKKTIAS 54 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~-~dP--------------~~Rpt~~~I~~~L~~ 54 (69)
+...++-.|+-||. .|+ ..|||-.+....+..
T Consensus 57 VERaIR~aI~~~w~~g~~~~l~~i~g~~~~~~~~kPTnsEFI~~~~~ 103 (106)
T PF08769_consen 57 VERAIRHAIEVAWTRGNPELLEKIFGYTINEEKGKPTNSEFIAMLAD 103 (106)
T ss_dssp HHHHHHHHHHHHHHCS-CCCCHHCC-HHHHT-SS---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHhCCCcccCCCCCCHHHHHHHHHH
Confidence 56678889999999 555 589999998877654
No 362
>COG1490 Dtd D-Tyr-tRNAtyr deacylase [Translation, ribosomal structure and biogenesis]
Probab=38.25 E-value=37 Score=22.01 Aligned_cols=29 Identities=10% Similarity=0.007 Sum_probs=16.7
Q ss_pred ecCCCCCCCCCCCccCccHHHHHHHHHHh
Q psy10024 6 CLDQIRPAIPNRWHACKDLHLVLKIMQEC 34 (69)
Q Consensus 6 v~~~~RP~ip~~~~~~~~~~~l~~Lm~~C 34 (69)
+.+|.||+|...-+.+..-+.|....+.|
T Consensus 85 t~kG~RPsFs~aa~p~~A~~lYe~f~~~l 113 (145)
T COG1490 85 TKKGRRPSFSKAAKPDQAEELYEYFVELL 113 (145)
T ss_pred ccCCCCCCccccCChHHHHHHHHHHHHHH
Confidence 46799999988755443333333333333
No 363
>PRK05273 D-tyrosyl-tRNA(Tyr) deacylase; Provisional
Probab=37.34 E-value=33 Score=22.13 Aligned_cols=29 Identities=10% Similarity=-0.026 Sum_probs=18.2
Q ss_pred ecCCCCCCCCCCCccCccHHHHHHHHHHh
Q psy10024 6 CLDQIRPAIPNRWHACKDLHLVLKIMQEC 34 (69)
Q Consensus 6 v~~~~RP~ip~~~~~~~~~~~l~~Lm~~C 34 (69)
+.+|.||.|....+.+..-+.|...+++|
T Consensus 85 ~~KG~rP~F~~a~~~~~A~~ly~~f~~~l 113 (147)
T PRK05273 85 TRKGRRPSFSAAAPPEEAEPLYDYFVEAL 113 (147)
T ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHH
Confidence 35789999998766554444444444444
No 364
>KOG0584|consensus
Probab=36.85 E-value=36 Score=26.89 Aligned_cols=25 Identities=20% Similarity=0.311 Sum_probs=22.6
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
+++.++|+.|-.. .+.|||+.++.+
T Consensus 271 Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 271 PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 5799999999999 999999999864
No 365
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=36.80 E-value=54 Score=22.92 Aligned_cols=28 Identities=11% Similarity=-0.034 Sum_probs=20.9
Q ss_pred cHHHHHHHHHHhcccCCCC--CCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATA--RPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~--Rpt~~~I~~ 50 (69)
....+.+++..|...++.. |+|+.++++
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 274 ISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred CCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 4567889999998755543 889988865
No 366
>PF04433 SWIRM: SWIRM domain; InterPro: IPR007526 The SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in eukaryotic chromosomal proteins. It is named after the proteins SWI3, RSC8 and MOIRA in which it was first recognised. This domain is predicted to mediate protein-protein interactions in the assembly of chromatin-protein complexes. The SWIRM domain can be linked to different domains, such as the ZZ-type zinc finger (IPR000433 from INTERPRO), the Myb DNA-binding domain (IPR001005 from INTERPRO), the HORMA domain (IPR003511 from INTERPRO), the amino-oxidase domain, the chromo domain (IPR000953 from INTERPRO), and the JAB1/PAD1 domain.; GO: 0005515 protein binding; PDB: 2Z3Y_A 2UXN_A 2Y48_A 2HKO_A 2XAF_A 2X0L_A 2XAJ_A 2UXX_A 2V1D_A 2L3D_A ....
Probab=36.79 E-value=20 Score=20.28 Aligned_cols=30 Identities=13% Similarity=0.100 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
--.++..|-..|..+|....|+.+.++.+.
T Consensus 35 Yl~iRn~il~~w~~n~~~~lt~~~~~~~i~ 64 (86)
T PF04433_consen 35 YLKIRNTILAEWRKNPNKYLTKTDARKLIK 64 (86)
T ss_dssp HHHHHHHHHHHHHHHTTS---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCCcccHHHHHHHcc
Confidence 345778899999999999999999987766
No 367
>PTZ00120 D-tyrosyl-tRNA(Tyr) deacylase; Provisional
Probab=36.77 E-value=33 Score=22.32 Aligned_cols=31 Identities=13% Similarity=0.027 Sum_probs=19.5
Q ss_pred ecCCCCCCCCCCCccCccHHHHHHHHHHhcc
Q psy10024 6 CLDQIRPAIPNRWHACKDLHLVLKIMQECWY 36 (69)
Q Consensus 6 v~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~ 36 (69)
+.+|.||+|...-+.....+.|...++.|-.
T Consensus 85 ~~KG~RPsF~~aa~~~~A~~Ly~~f~~~l~~ 115 (154)
T PTZ00120 85 VKKGNKPDFHLAMSPEDALPLYNKFVEKFKK 115 (154)
T ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHh
Confidence 3579999998776555444455555555543
No 368
>PF13220 DUF4028: Protein of unknown function (DUF4028)
Probab=35.91 E-value=42 Score=18.51 Aligned_cols=21 Identities=24% Similarity=0.126 Sum_probs=15.0
Q ss_pred CCCCCCcHHHHHHHHHHHHhh
Q psy10024 38 VATARPTALRIKKTIASIILS 58 (69)
Q Consensus 38 dP~~Rpt~~~I~~~L~~l~~~ 58 (69)
.--.||||.++.+.-+.-..+
T Consensus 37 eelgrptfkevekdwkenres 57 (65)
T PF13220_consen 37 EELGRPTFKEVEKDWKENRES 57 (65)
T ss_pred hhhCCCcHHHHHHHHHHhhhh
Confidence 345799999998877664433
No 369
>TIGR00256 D-tyrosyl-tRNA(Tyr) deacylase. This homodimeric enzyme appears able to cleave any D-amino acid (and glycine, which does not have distinct D/L forms) from charged tRNA. The name reflects characterization with respect to D-Tyr on tRNA(Tyr) as established in the literature, but substrate specificity seems much broader.
Probab=35.63 E-value=37 Score=21.84 Aligned_cols=29 Identities=14% Similarity=0.212 Sum_probs=17.5
Q ss_pred ecCCCCCCCCCCCccCccHHHHHHHHHHh
Q psy10024 6 CLDQIRPAIPNRWHACKDLHLVLKIMQEC 34 (69)
Q Consensus 6 v~~~~RP~ip~~~~~~~~~~~l~~Lm~~C 34 (69)
+.+|.||.|...-+.....+.|....+.|
T Consensus 85 ~~KG~rPsF~~a~~~~~A~~ly~~fv~~l 113 (145)
T TIGR00256 85 TKKGMRPSFSKGASPDRAEELYEYFVELC 113 (145)
T ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHH
Confidence 34799999998765544444444444443
No 370
>PF00718 Polyoma_coat: Polyomavirus coat protein This family is a subset of the SCOP family; InterPro: IPR000662 This entry represents the major capsid protein VP1 (viral protein 1) from Polyomaviruses, such as Murine polyomavirus (strain P16 small-plaque) (MPyV) []. Polyomaviruses are dsDNA viruses with no RNA stage in their life cycle. The virus capsid is composed of 72 icosahedral units, each of which is composed of five copies of VP1. The virus attaches to the cell surface by recognition of oligosaccharides terminating in alpha(2,3)-linked sialic acid. The capsid protein VP1 forms a pentamer. The complete capsid is composed of 72 VP1 pentamers, with a minor capsid protein, VP2 or VP3, inserted into the centre of each pentamer like a hairpin. This structure restricts the exposure of internal proteins during viral entry. Polyomavirus coat assembly is rigorously controlled by chaperone-mediated assembly. During viral infection, the heat shock chaperone hsc70 binds VP1 and co-localises it in the nucleus, thereby regulating capsid assembly [].; GO: 0005198 structural molecule activity, 0019028 viral capsid; PDB: 3NXG_C 3NXD_D 1CN3_C 1SID_D 1VPS_B 1SIE_A 1VPN_A 3S7V_F 3S7X_A 3BWQ_C ....
Probab=35.50 E-value=12 Score=26.80 Aligned_cols=9 Identities=44% Similarity=1.291 Sum_probs=7.0
Q ss_pred HhcccCCCC
Q psy10024 33 ECWYPVATA 41 (69)
Q Consensus 33 ~CW~~dP~~ 41 (69)
|||..||++
T Consensus 185 E~W~PDPsk 193 (297)
T PF00718_consen 185 ECWCPDPSK 193 (297)
T ss_dssp TTEEE-TTS
T ss_pred EEECCCCCc
Confidence 899999975
No 371
>PF05136 Phage_portal_2: Phage portal protein, lambda family ; InterPro: IPR006429 This entry is represented by Bacteriophage lambda, GpB, portal protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This group of sequences represent one of several distantly related families of phage portal protein. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage head (capsid) and the tail proteins. It functions as a dodecamer of a single polypeptide of average mol. wt. of 40-90 kDa. ; GO: 0003677 DNA binding, 0019028 viral capsid
Probab=35.43 E-value=63 Score=22.95 Aligned_cols=48 Identities=15% Similarity=0.146 Sum_probs=33.5
Q ss_pred eecCCCCCCCCCCCccCccHHHHHHHHHHhc-------ccCCCCCCcHHHHHHHHH
Q psy10024 5 VCLDQIRPAIPNRWHACKDLHLVLKIMQECW-------YPVATARPTALRIKKTIA 53 (69)
Q Consensus 5 Vv~~~~RP~ip~~~~~~~~~~~l~~Lm~~CW-------~~dP~~Rpt~~~I~~~L~ 53 (69)
||-.|.+|.-...+... ....+.+.|++.| ..|.+.|.||..+....-
T Consensus 53 vVG~Gi~~~~~~~~~~~-~~~~~~~~ie~~w~~wa~~~~~D~~g~~~f~~lq~l~~ 107 (355)
T PF05136_consen 53 VVGTGIRPQSKPDARGL-EDEELNREIEDLWREWAESPNCDAEGRLDFYGLQRLAV 107 (355)
T ss_pred cccceEEEeecCCcccc-hhHHHHHHHHHHHHHHhcCCCcCcCCCcCHHHHHHHHH
Confidence 45578888744333221 3467888999987 668899999999876543
No 372
>KOG0577|consensus
Probab=33.36 E-value=65 Score=26.20 Aligned_cols=38 Identities=13% Similarity=0.277 Sum_probs=29.1
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
++.=|.++. +.....+...+..|-..-|..|||..++.
T Consensus 239 QNesPtLqs----~eWS~~F~~Fvd~CLqKipqeRptse~ll 276 (948)
T KOG0577|consen 239 QNESPTLQS----NEWSDYFRNFVDSCLQKIPQERPTSEELL 276 (948)
T ss_pred hcCCCCCCC----chhHHHHHHHHHHHHhhCcccCCcHHHHh
Confidence 444455553 34556799999999999999999998764
No 373
>KOG0660|consensus
Probab=32.92 E-value=33 Score=25.31 Aligned_cols=27 Identities=15% Similarity=0.049 Sum_probs=23.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
..+.-.+|++..-.-||.+|+|+.+..
T Consensus 282 a~p~AidLlekmL~fdP~kRita~eAL 308 (359)
T KOG0660|consen 282 ANPLAIDLLEKMLVFDPKKRITAEEAL 308 (359)
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHh
Confidence 345678899999999999999999875
No 374
>KOG0983|consensus
Probab=32.63 E-value=65 Score=23.74 Aligned_cols=39 Identities=13% Similarity=0.210 Sum_probs=30.0
Q ss_pred CCCCCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 8 DQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 8 ~~~RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
+.+=|.+|..- ...+.+.+++..|-..|+..||-..++.
T Consensus 309 n~ePP~L~~~~---gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll 347 (391)
T KOG0983|consen 309 NEEPPLLPGHM---GFSPDFQSFVKDCLTKDHRKRPKYNKLL 347 (391)
T ss_pred hcCCCCCCccc---CcCHHHHHHHHHHhhcCcccCcchHHHh
Confidence 34446666531 2667899999999999999999987764
No 375
>PHA02614 Major capsid protein VP1; Provisional
Probab=32.14 E-value=16 Score=26.84 Aligned_cols=9 Identities=44% Similarity=1.291 Sum_probs=8.0
Q ss_pred HhcccCCCC
Q psy10024 33 ECWYPVATA 41 (69)
Q Consensus 33 ~CW~~dP~~ 41 (69)
|||..||++
T Consensus 203 E~W~PDPsk 211 (363)
T PHA02614 203 ECWCPDPSK 211 (363)
T ss_pred EeECCCCCc
Confidence 899999975
No 376
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=31.40 E-value=64 Score=22.19 Aligned_cols=41 Identities=10% Similarity=0.058 Sum_probs=35.7
Q ss_pred HHHHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcccCCCC
Q psy10024 25 HLVLKIMQECWYPVATARPTALRIKKTIASIILSDQAVSYP 65 (69)
Q Consensus 25 ~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~~~~~~ 65 (69)
..+..+++++|+.++..|=+-..+.+.+..++......+-+
T Consensus 111 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 151 (269)
T COG0510 111 IEPKDYLELLWQQNSRAYRDNHLLRKKLKELRRALEEVPKD 151 (269)
T ss_pred hhHHHHHHHHHhhchHHhhhhHHHHHHHHHHHHHhhhcCCC
Confidence 67899999999999999999999999999998887765544
No 377
>PF14611 SLS: Mitochondrial inner-membrane-bound regulator
Probab=31.13 E-value=31 Score=22.48 Aligned_cols=18 Identities=22% Similarity=0.654 Sum_probs=13.5
Q ss_pred HHHHHHHHhcccCCCCCC
Q psy10024 26 LVLKIMQECWYPVATARP 43 (69)
Q Consensus 26 ~l~~Lm~~CW~~dP~~Rp 43 (69)
....||++||.-....-.
T Consensus 5 l~~~Il~d~W~l~v~e~v 22 (210)
T PF14611_consen 5 LAERILRDCWNLEVSEEV 22 (210)
T ss_pred HHHHHHHHhcCCccccee
Confidence 456799999998766544
No 378
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=30.32 E-value=62 Score=22.39 Aligned_cols=26 Identities=15% Similarity=-0.073 Sum_probs=17.7
Q ss_pred cHHHHHHHHHHhcccCCCCCCc---HHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPT---ALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt---~~~I~ 49 (69)
......+++..+ ..+|+.|++ +.+|+
T Consensus 275 ~s~~~~~li~~l-~~~p~~R~~~~~~~ei~ 303 (382)
T cd05625 275 LSPEASDLIIKL-CRGPEDRLGKNGADEIK 303 (382)
T ss_pred CCHHHHHHHHHH-ccCHhHcCCCCCHHHHh
Confidence 344666766664 359999998 77665
No 379
>cd00563 Dtyr_deacylase D-Tyrosyl-tRNAtyr deacylases; a class of tRNA-dependent hydrolases which are capable of hydrolyzing the ester bond of D-Tyrosyl-tRNA reducing the level of cellular D-Tyrosine while recycling the peptidyl-tRNA; found in bacteria and in eukaryotes but not in archea; beta barrel-like fold structure; forms homodimers in which two surface cavities serve as the active site for tRNA binding
Probab=30.00 E-value=49 Score=21.25 Aligned_cols=28 Identities=14% Similarity=0.008 Sum_probs=16.7
Q ss_pred cCCCCCCCCCCCccCccHHHHHHHHHHh
Q psy10024 7 LDQIRPAIPNRWHACKDLHLVLKIMQEC 34 (69)
Q Consensus 7 ~~~~RP~ip~~~~~~~~~~~l~~Lm~~C 34 (69)
.+|.||.|...-+.....+.|...+++|
T Consensus 86 ~KG~rP~F~~a~~~e~A~~ly~~fv~~l 113 (145)
T cd00563 86 KKGRRPSFSAAAPPDKAEPLYESFVELL 113 (145)
T ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHH
Confidence 4789999998755444333444444433
No 380
>PF08247 ENOD40: ENOD40 protein; InterPro: IPR013186 The soybean early nodulin 40 (ENOD40) mRNA contains two short overlapping ORFs; in vitro translation yields two peptides of 12 and 24 amino acids []. The putative role of the ENOD40 genes has been in favour of organogenesis, such as induction of the cortical cell divisions that lead to initiation of nodule primordia, in developing lateral roots and embryonic tissues. This supports the hypothesis for a role of ENOD40 in lateral organ development [].
Probab=29.86 E-value=8.2 Score=14.89 Aligned_cols=8 Identities=38% Similarity=1.066 Sum_probs=4.9
Q ss_pred HHHhcccC
Q psy10024 31 MQECWYPV 38 (69)
Q Consensus 31 m~~CW~~d 38 (69)
|+-||+..
T Consensus 1 m~l~wqks 8 (12)
T PF08247_consen 1 MELCWQKS 8 (12)
T ss_pred CceeEeee
Confidence 45688753
No 381
>KOG0030|consensus
Probab=29.70 E-value=25 Score=22.92 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=23.3
Q ss_pred CCCcHHHHHHHHHHHHhhcccCCCCccC
Q psy10024 41 ARPTALRIKKTIASIILSDQAVSYPDVI 68 (69)
Q Consensus 41 ~Rpt~~~I~~~L~~l~~~~~~~~~~~~~ 68 (69)
+|.+|..+.-.+..+........|+|.+
T Consensus 64 ~rl~FE~fLpm~q~vaknk~q~t~edfv 91 (152)
T KOG0030|consen 64 KRLDFEEFLPMYQQVAKNKDQGTYEDFV 91 (152)
T ss_pred hhhhHHHHHHHHHHHHhccccCcHHHHH
Confidence 7899999999998888887777777754
No 382
>cd00383 trans_reg_C Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase and a response regulator. The former autophosphorylates in a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. The C-terminal effector domain contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunite of RNA polymerase.
Probab=29.41 E-value=1e+02 Score=16.78 Aligned_cols=32 Identities=6% Similarity=0.070 Sum_probs=18.2
Q ss_pred HHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcc
Q psy10024 27 VLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60 (69)
Q Consensus 27 l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~ 60 (69)
-.+|++.+|..+++ .+...+...+.+|...+.
T Consensus 45 ~~~l~~~lw~~~~~--~~~~~l~~~I~rLRkkl~ 76 (95)
T cd00383 45 REQLLEAVWGDDYD--VDDRTVDVHISRLRKKLE 76 (95)
T ss_pred HHHHHHHhcCCCCC--CCcccHHHHHHHHHHHhc
Confidence 56799999987762 233334444444444443
No 383
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=28.93 E-value=50 Score=12.93 Aligned_cols=19 Identities=5% Similarity=-0.050 Sum_probs=13.1
Q ss_pred ccCCCCCCcHHHHHHHHHH
Q psy10024 36 YPVATARPTALRIKKTIAS 54 (69)
Q Consensus 36 ~~dP~~Rpt~~~I~~~L~~ 54 (69)
+.+.+.+.++.++...+.+
T Consensus 10 d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 10 DKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CCCCCCcEeHHHHHHHHHh
Confidence 6666777888777666554
No 384
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=28.87 E-value=19 Score=22.61 Aligned_cols=25 Identities=24% Similarity=0.368 Sum_probs=0.0
Q ss_pred CCCCCCCccCccHHHHHHHHHHhcc
Q psy10024 12 PAIPNRWHACKDLHLVLKIMQECWY 36 (69)
Q Consensus 12 P~ip~~~~~~~~~~~l~~Lm~~CW~ 36 (69)
|..|+--...++...|.+.|+.||.
T Consensus 94 ~~~pPLqNcE~IEskLRK~iQg~Wr 118 (118)
T PF08976_consen 94 PGTPPLQNCEPIESKLRKKIQGCWR 118 (118)
T ss_dssp -------------------------
T ss_pred CCCCCCcccHHHHHHHHHHHHhhcC
Confidence 3333333344677889999999994
No 385
>PRK12482 flagellar motor protein MotA; Provisional
Probab=28.87 E-value=57 Score=23.13 Aligned_cols=20 Identities=20% Similarity=0.263 Sum_probs=16.2
Q ss_pred CCCCCCcHHHHHHHHHHHHh
Q psy10024 38 VATARPTALRIKKTIASIIL 57 (69)
Q Consensus 38 dP~~Rpt~~~I~~~L~~l~~ 57 (69)
.++.||||.++-+.++.+.+
T Consensus 266 ~~~~~p~f~e~e~~~~~~~~ 285 (287)
T PRK12482 266 PLDNKPTFATLDSWINAMIT 285 (287)
T ss_pred CCccCCCHHHHHHHHHHhhc
Confidence 45789999999999887643
No 386
>KOG0658|consensus
Probab=28.38 E-value=54 Score=24.25 Aligned_cols=28 Identities=14% Similarity=0.051 Sum_probs=25.2
Q ss_pred ccHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 22 KDLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 22 ~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
..+++..+++.++-..+|+.|.|+.++.
T Consensus 277 ~~~~d~~dll~~~L~Y~P~~R~~~~~~l 304 (364)
T KOG0658|consen 277 RLPPDALDLLSKLLQYSPSKRLSALEAL 304 (364)
T ss_pred CCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence 4667899999999999999999998875
No 387
>PF07910 Peptidase_C78: Peptidase family C78; InterPro: IPR012462 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry contains UfSP1 and UfSP2, which are cysteine peptidases required for the processing and activation of Ubiquitin fold modifier 1 (Ufm1, IPR005375 from INTERPRO) and for its release from conjugated cellular proteins. UfSP1 and UfSP2 are 217 aa and 461 aa respectively [, ]. The peptidases belong to MEROPS peptidase family C78, clan CA. The UfSP2 family have an N-terminal extension with one or more zinc finger domains of the C2H2 type (IPR007087 from INTERPRO), which have been shown to be involved in protein:protein interaction. UfSP2 is present in most, if not all, multi-cellular organisms including plants, nematodes, flies, and mammals, whereas UfSP1 is not present in plants and nematodes []. ; PDB: 3OQC_B 2Z84_A.
Probab=25.63 E-value=59 Score=22.01 Aligned_cols=21 Identities=10% Similarity=0.294 Sum_probs=14.0
Q ss_pred ccHHHHHHHHHHhccc--CCCCC
Q psy10024 22 KDLHLVLKIMQECWYP--VATAR 42 (69)
Q Consensus 22 ~~~~~l~~Lm~~CW~~--dP~~R 42 (69)
|....|.++|++.|+. ||..|
T Consensus 55 Psi~~iQ~~le~awdkG~d~~G~ 77 (218)
T PF07910_consen 55 PSIREIQQWLEEAWDKGFDPQGA 77 (218)
T ss_dssp --HHHHHHHHHHCTSS---C---
T ss_pred CCHHHHHHHHHHHHhhcCCcccc
Confidence 4567899999999999 99666
No 388
>KOG0574|consensus
Probab=25.60 E-value=24 Score=26.34 Aligned_cols=27 Identities=22% Similarity=0.305 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 24 LHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
...+.+.++.|--.+|+.|-||.++.+
T Consensus 256 S~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 256 SSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 346889999999999999999998753
No 389
>KOG1167|consensus
Probab=24.67 E-value=68 Score=24.17 Aligned_cols=27 Identities=22% Similarity=0.186 Sum_probs=23.6
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIK 49 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~ 49 (69)
.+....+|+..|-+-||.+|-||.+..
T Consensus 353 ~~~~~~dlLdk~le~np~kRitAEeAL 379 (418)
T KOG1167|consen 353 FPALLLDLLDKCLELNPQKRITAEDAL 379 (418)
T ss_pred ccHHHHHHHHHHccCChhhcccHHHHh
Confidence 345788999999999999999998875
No 390
>PF04458 DUF505: Protein of unknown function (DUF505); InterPro: IPR007548 This is a family of uncharacterised prokaryotic proteins.
Probab=24.60 E-value=1.1e+02 Score=24.07 Aligned_cols=28 Identities=29% Similarity=0.399 Sum_probs=22.6
Q ss_pred HHHHHHHHHhc---ccCCCCCCcHHHHHHHH
Q psy10024 25 HLVLKIMQECW---YPVATARPTALRIKKTI 52 (69)
Q Consensus 25 ~~l~~Lm~~CW---~~dP~~Rpt~~~I~~~L 52 (69)
..+-+.|.+-| ..||+-.||+.+|++.|
T Consensus 290 ~evLk~I~~lwkk~e~nPe~~PT~~eI~~~l 320 (591)
T PF04458_consen 290 VEVLKAIDHLWKKHETNPEELPTFKEIKREL 320 (591)
T ss_pred HHHHHHHHHHHhhccCCcccCCCHHHHHHHH
Confidence 45666777777 67899999999999855
No 391
>TIGR01204 bioW 6-carboxyhexanoate--CoA ligase. Alternate name: pimeloyl-CoA synthase.
Probab=23.36 E-value=32 Score=23.87 Aligned_cols=9 Identities=22% Similarity=0.575 Sum_probs=7.2
Q ss_pred HhcccCCCC
Q psy10024 33 ECWYPVATA 41 (69)
Q Consensus 33 ~CW~~dP~~ 41 (69)
-||+.||+-
T Consensus 171 lC~SDDP~Y 179 (232)
T TIGR01204 171 LCWSDDPDY 179 (232)
T ss_pred EEecCCCCC
Confidence 499999973
No 392
>PF00486 Trans_reg_C: Transcriptional regulatory protein, C terminal; InterPro: IPR001867 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain that is almost always found associated with the response regulator receiver domain (see IPR001789 from INTERPRO). It may play a role in DNA binding [].; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2K4J_A 2JPB_A 1ODD_A 1OPC_A 1KGS_A 2PMU_E 2JZY_A 1GXP_B 1QQI_A 2Z33_A ....
Probab=23.27 E-value=1.3e+02 Score=15.77 Aligned_cols=32 Identities=6% Similarity=0.083 Sum_probs=19.6
Q ss_pred HHHHHHHhcccCCCCCCcHHHHHHHHHHHHhhcc
Q psy10024 27 VLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60 (69)
Q Consensus 27 l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l~~~~~ 60 (69)
-.+|++..|..+. -.+-..+...+..|...+.
T Consensus 27 ~~~l~~~~w~~~~--~~~~~~l~~~I~rLR~kL~ 58 (77)
T PF00486_consen 27 REELIEALWGDEE--DVSDNSLDVHISRLRKKLE 58 (77)
T ss_dssp HHHHHHHHTSSSS--TTCTHHHHHHHHHHHHHHH
T ss_pred HHHhCChhhhccc--ccchhhHHHHHHHHHHHHh
Confidence 4689999999998 3333444444444444443
No 393
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=23.15 E-value=33 Score=23.88 Aligned_cols=8 Identities=25% Similarity=0.738 Sum_probs=6.8
Q ss_pred HhcccCCC
Q psy10024 33 ECWYPVAT 40 (69)
Q Consensus 33 ~CW~~dP~ 40 (69)
-||+.||+
T Consensus 178 LC~SDDP~ 185 (239)
T PF03744_consen 178 LCWSDDPD 185 (239)
T ss_pred EEecCCCC
Confidence 39999997
No 394
>COG3327 PaaX Phenylacetic acid-responsive transcriptional repressor [Transcription]
Probab=22.58 E-value=45 Score=23.82 Aligned_cols=17 Identities=18% Similarity=0.327 Sum_probs=13.5
Q ss_pred HHHHHHHHHHhcccCCC
Q psy10024 24 LHLVLKIMQECWYPVAT 40 (69)
Q Consensus 24 ~~~l~~Lm~~CW~~dP~ 40 (69)
..+...++++||+-++-
T Consensus 164 ~~epk~l~e~CWdL~e~ 180 (291)
T COG3327 164 LGEPKALAEKCWDLSEW 180 (291)
T ss_pred hhchHHHHHHhcCchHH
Confidence 34678999999998753
No 395
>KOG0484|consensus
Probab=22.44 E-value=51 Score=20.58 Aligned_cols=19 Identities=16% Similarity=0.294 Sum_probs=14.6
Q ss_pred HHHHHHHhhcccCCCCccC
Q psy10024 50 KTIASIILSDQAVSYPDVI 68 (69)
Q Consensus 50 ~~L~~l~~~~~~~~~~~~~ 68 (69)
..|++|.....-.+|+||.
T Consensus 27 ~QLkELErvF~ETHYPDIY 45 (125)
T KOG0484|consen 27 AQLKELERVFAETHYPDIY 45 (125)
T ss_pred HHHHHHHHHHHhhcCCcch
Confidence 4566777777788999985
No 396
>cd06397 PB1_UP1 Uncharacterized protein 1. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions.
Probab=22.43 E-value=58 Score=19.17 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=16.6
Q ss_pred CCcHHHHHHHHHHHHhhcc---cCCCCc
Q psy10024 42 RPTALRIKKTIASIILSDQ---AVSYPD 66 (69)
Q Consensus 42 Rpt~~~I~~~L~~l~~~~~---~~~~~~ 66 (69)
=||+..+.++|..|..-.. .++|.|
T Consensus 19 ~pt~~~L~~kl~~Lf~lp~~~~~vtYiD 46 (82)
T cd06397 19 IPTWEALASKLENLYNLPEIKVGVTYID 46 (82)
T ss_pred CccHHHHHHHHHHHhCCChhHeEEEEEc
Confidence 4788888888888775542 444543
No 397
>PRK01322 6-carboxyhexanoate--CoA ligase; Provisional
Probab=22.18 E-value=35 Score=23.81 Aligned_cols=10 Identities=20% Similarity=0.574 Sum_probs=7.7
Q ss_pred HHhcccCCCC
Q psy10024 32 QECWYPVATA 41 (69)
Q Consensus 32 ~~CW~~dP~~ 41 (69)
+-||+.||+-
T Consensus 177 ElC~SDDP~Y 186 (242)
T PRK01322 177 ELCWSDDPDY 186 (242)
T ss_pred EEEecCCCCC
Confidence 4599999973
No 398
>COG4064 MtrG Tetrahydromethanopterin S-methyltransferase, subunit G [Coenzyme metabolism]
Probab=21.70 E-value=66 Score=18.54 Aligned_cols=19 Identities=21% Similarity=0.071 Sum_probs=13.6
Q ss_pred cHHHHHHHHHHHHhhcccC
Q psy10024 44 TALRIKKTIASIILSDQAV 62 (69)
Q Consensus 44 t~~~I~~~L~~l~~~~~~~ 62 (69)
.|.++.++|+++....++.
T Consensus 16 dfne~~kRLdeieekvef~ 34 (75)
T COG4064 16 DFNEIHKRLDEIEEKVEFV 34 (75)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 3678888888887765543
No 399
>smart00862 Trans_reg_C Transcriptional regulatory protein, C terminal. This domain is almost always found associated with the response regulator receiver domain. It may play a role in DNA binding.
Probab=21.45 E-value=1.4e+02 Score=15.55 Aligned_cols=30 Identities=7% Similarity=0.029 Sum_probs=18.6
Q ss_pred HHHHHHHhcccCC--CCCCcHHHHHHHHHHHH
Q psy10024 27 VLKIMQECWYPVA--TARPTALRIKKTIASII 56 (69)
Q Consensus 27 l~~Lm~~CW~~dP--~~Rpt~~~I~~~L~~l~ 56 (69)
-.+|+..+|..++ ..+-+......+|.+..
T Consensus 27 ~~~l~~~lw~~~~~~~~~~~l~~~i~~LR~~l 58 (78)
T smart00862 27 REELLEAVWGDDDDDVDDNTLDVHISRLRKKL 58 (78)
T ss_pred HHHHHHHHcCCCCCCCccchHHHHHHHHHHHH
Confidence 5788999998764 34444555555555444
No 400
>KOG0588|consensus
Probab=21.23 E-value=1e+02 Score=24.99 Aligned_cols=28 Identities=14% Similarity=-0.012 Sum_probs=25.2
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
+..+-..|+...-+-||+.|.|..+|.+
T Consensus 235 Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 235 ISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred CCHHHHHHHHHHhccCccccccHHHHhh
Confidence 5567899999999999999999999975
No 401
>COG3382 Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]
Probab=21.20 E-value=2e+02 Score=19.93 Aligned_cols=35 Identities=11% Similarity=0.009 Sum_probs=27.6
Q ss_pred ccCccHHHHHHHHHHhcccCCC-CCCcHHHHHHHHHH
Q psy10024 19 HACKDLHLVLKIMQECWYPVAT-ARPTALRIKKTIAS 54 (69)
Q Consensus 19 ~~~~~~~~l~~Lm~~CW~~dP~-~Rpt~~~I~~~L~~ 54 (69)
..++....+++... -...+|+ .|||+..+.+++.+
T Consensus 58 ~d~p~v~awr~~y~-~~g~kp~k~r~S~EALlrRv~k 93 (229)
T COG3382 58 SDEPVVKAWRDAYW-RFGIKPTKTRPSAEALLRRVLK 93 (229)
T ss_pred ccchHHHHHHHHHH-HhCCCcCCCCCcHHHHHHHHHc
Confidence 34566777777775 5678999 99999999999875
No 402
>KOG0585|consensus
Probab=21.17 E-value=60 Score=25.32 Aligned_cols=30 Identities=13% Similarity=-0.090 Sum_probs=26.1
Q ss_pred cHHHHHHHHHHhcccCCCCCCcHHHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATARPTALRIKKTI 52 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L 52 (69)
..+.+.+||...-+.||+.|.|..+|++-.
T Consensus 344 ~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 344 INEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred ccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 456899999999999999999999997543
No 403
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=21.13 E-value=51 Score=17.63 Aligned_cols=16 Identities=13% Similarity=0.200 Sum_probs=12.0
Q ss_pred CCcHHHHHHHHHHHHh
Q psy10024 42 RPTALRIKKTIASIIL 57 (69)
Q Consensus 42 Rpt~~~I~~~L~~l~~ 57 (69)
|.||.+|+.-|+.+.-
T Consensus 1 kmsf~Evk~lLk~~NI 16 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNI 16 (51)
T ss_dssp EBEHHHHHHHHHHTT-
T ss_pred CCCHHHHHHHHHHHcc
Confidence 5688999988887653
No 404
>KOG0580|consensus
Probab=21.05 E-value=1.4e+02 Score=21.30 Aligned_cols=35 Identities=6% Similarity=-0.030 Sum_probs=27.8
Q ss_pred CCCCCCCCccCccHHHHHHHHHHhcccCCCCCCcHHHHHH
Q psy10024 11 RPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKK 50 (69)
Q Consensus 11 RP~ip~~~~~~~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~ 50 (69)
|-.+|++ +..+-++||..|--.+|..|.+-.+++.
T Consensus 238 ~~~~p~~-----is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 238 DLKFPST-----ISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred cccCCcc-----cChhHHHHHHHHhccCccccccHHHHhh
Confidence 4445654 4457899999999999999999988864
No 405
>cd06395 PB1_Map2k5 PB1 domain is essential part of the mitogen-activated protein kinase kinase 5 (Map2k5, alias MEK5) one of the key member of the signaling kinases cascade which involved in angiogenesis and early cardiovascular development. The PB1 domain of Map2k5 interacts with the PB1 domain of another members of kinase cascade MEKK2 (or MEKK3). A canonical PB1-PB1 interaction, involving heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The Map2k5 protein contains a type I PB1 domain.
Probab=20.73 E-value=1.2e+02 Score=18.05 Aligned_cols=32 Identities=16% Similarity=0.281 Sum_probs=20.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhcc--cCCCCc
Q psy10024 35 WYPVATARPTALRIKKTIASIILSDQ--AVSYPD 66 (69)
Q Consensus 35 W~~dP~~Rpt~~~I~~~L~~l~~~~~--~~~~~~ 66 (69)
|.-++-.-++|.++...+........ +..|+|
T Consensus 15 w~V~~~~~L~F~DvL~~I~~vlp~aT~tAFeYED 48 (91)
T cd06395 15 WTVQSGPQLLFRDVLDVIGQVLPEATTTAFEYED 48 (91)
T ss_pred ccccCcccccHHHHHHHHHHhcccccccceeecc
Confidence 66666677788888877777665543 444444
No 406
>smart00707 RPEL Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2.
Probab=20.58 E-value=65 Score=14.88 Aligned_cols=11 Identities=27% Similarity=0.555 Sum_probs=8.0
Q ss_pred CCCCcHHHHHH
Q psy10024 40 TARPTALRIKK 50 (69)
Q Consensus 40 ~~Rpt~~~I~~ 50 (69)
+.||+..++.+
T Consensus 8 ~~RP~~eeLv~ 18 (26)
T smart00707 8 SQRPTREELEE 18 (26)
T ss_pred HcCCCHHHHHH
Confidence 46888887765
No 407
>cd06403 PB1_Par6 The PB1 domain is an essential part of Par6 protein which in complex with Par3 and aPKC proteins is crucial for establishment of apical-basal polarity of animal cells. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The
Probab=20.51 E-value=1e+02 Score=18.09 Aligned_cols=33 Identities=9% Similarity=0.019 Sum_probs=22.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhhcc---cCCCCcc
Q psy10024 35 WYPVATARPTALRIKKTIASIILSDQ---AVSYPDV 67 (69)
Q Consensus 35 W~~dP~~Rpt~~~I~~~L~~l~~~~~---~~~~~~~ 67 (69)
|+-+...-++|.+..+.+..+..-.+ .+.|+|.
T Consensus 14 Fsl~r~~~~~f~ef~~ll~~lH~l~~~~f~i~Y~D~ 49 (80)
T cd06403 14 FSLDRNKPGKFEDFYKLLEHLHHIPNVDFLIGYTDP 49 (80)
T ss_pred EEeccccCcCHHHHHHHHHHHhCCCCCcEEEEEeCC
Confidence 45566677889888888888764432 5556553
No 408
>PF13206 VSG_B: Trypanosomal VSG domain
Probab=20.27 E-value=1.6e+02 Score=20.27 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=29.4
Q ss_pred ccHHHHHHHHHHhcccCCCCCCcHHHHHHHHHHH
Q psy10024 22 KDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55 (69)
Q Consensus 22 ~~~~~l~~Lm~~CW~~dP~~Rpt~~~I~~~L~~l 55 (69)
.....+..|...| ...+...+|+..|...|..+
T Consensus 235 ~~~~~w~~i~~~C-~~~~~~~~t~~~l~~al~~f 267 (351)
T PF13206_consen 235 DAKTAWKKIKKKC-PKKRKTKLTAAELEAALAAF 267 (351)
T ss_pred cHHHHHHHHHhCC-CCcCCCCCCchhHHHHHHHH
Confidence 4567888999999 99999999999999999877
No 409
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=20.19 E-value=1.5e+02 Score=20.65 Aligned_cols=27 Identities=11% Similarity=-0.034 Sum_probs=20.3
Q ss_pred cHHHHHHHHHHhcccCCCC---CCcHHHHHH
Q psy10024 23 DLHLVLKIMQECWYPVATA---RPTALRIKK 50 (69)
Q Consensus 23 ~~~~l~~Lm~~CW~~dP~~---Rpt~~~I~~ 50 (69)
....+.++|..|-. +|.. |+++.+|++
T Consensus 274 ~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 274 ISKEAKNLICAFLT-DREVRLGRNGVEEIKR 303 (371)
T ss_pred CCHHHHHHHHHHcC-ChhhhcCCCCHHHHhc
Confidence 55678999999997 4444 678888765
No 410
>PF02526 GBP_repeat: Glycophorin-binding protein; InterPro: IPR003681 The glycophorin-binding protein contains a tandem repeat. The repeated sequence determines the binding domain for an erythrocyte receptor binding protein of Plasmodium falciparum, the malarial parasite []. Erythrocyte invasion by the malarial merozoite is a receptor-mediated process, an obligatory step in the development of the parasite. The P. falciparum protein binds to the erythrocyte receptor glycophorin.
Probab=20.02 E-value=27 Score=17.45 Aligned_cols=24 Identities=13% Similarity=0.160 Sum_probs=15.3
Q ss_pred HHHHHhcccCCCCCCcHHHHHHHHH
Q psy10024 29 KIMQECWYPVATARPTALRIKKTIA 53 (69)
Q Consensus 29 ~Lm~~CW~~dP~~Rpt~~~I~~~L~ 53 (69)
++| .-|..||+-|-...-+.+.|.
T Consensus 8 qim-k~yaadpeyrkh~~v~yqil~ 31 (38)
T PF02526_consen 8 QIM-KAYAADPEYRKHLNVLYQILT 31 (38)
T ss_pred HHH-HHHhcCHHHHHHHHHHHHHHc
Confidence 344 679999988765555555443
Done!