RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10024
(69 letters)
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 303
Score = 46.4 bits (109), Expect = 2e-08
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASI 55
MRKVVC ++RP IPNRW +C+ L ++ KIM+ECWY AR TALRIKKT++ +
Sbjct: 241 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET
{Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 26.7 bits (58), Expect = 0.18
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASIILSDQAVSYPDV 67
+ ++M +CW+P A RP+ + I++I + Y V
Sbjct: 263 LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 303
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 276
Score = 26.1 bits (57), Expect = 0.28
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 1 MRKVVCLDQIRPAIPNRWHACKDLHLVLKIMQECWYPVATARPTALRIKKTIASIILS 58
+ +V + P + C + ++M EC RP +I +I + S
Sbjct: 218 IIFMVGRGYLSPDLSKVRSNCPKA--MKRLMAECLKKKRDERPLFPQILASIELLARS 273
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 262
Score = 25.4 bits (55), Expect = 0.59
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASI 55
V ++M+ CW+ A RP+ L++++ + I
Sbjct: 229 VYEVMKNCWHLDAAMRPSFLQLREQLEHI 257
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 273
Score = 25.1 bits (54), Expect = 0.63
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASIILSDQA 61
+ +M +CW + RP +K +++I+ ++A
Sbjct: 238 LYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 272
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 299
Score = 24.4 bits (52), Expect = 1.2
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASII 56
+ +M++CW+ V + RPT ++ + + I+
Sbjct: 266 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 299
Score = 24.3 bits (52), Expect = 1.3
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASII 56
+ ++M +CW RP +I T+ +I
Sbjct: 262 LHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 291
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 287
Score = 24.3 bits (52), Expect = 1.3
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASII 56
V ++M+ CW + RP+ I + ++
Sbjct: 245 VYELMRACWQWNPSDRPSFAEIHQAFETMF 274
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo
sapiens) [TaxId: 9606]}
Length = 263
Score = 24.3 bits (52), Expect = 1.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASII 56
V +IM CW RP R+ + +A I
Sbjct: 231 VYQIMNHCWKERPEDRPAFSRLLRQLAEIA 260
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor
receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Length = 299
Score = 24.1 bits (51), Expect = 1.8
Identities = 6/30 (20%), Positives = 17/30 (56%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASII 56
+ + M +CW+ + RPT + + + +++
Sbjct: 266 MYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 23.9 bits (51), Expect = 1.9
Identities = 7/35 (20%), Positives = 16/35 (45%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASIILSDQA 61
+ +M +CW RP L +++ + + S +
Sbjct: 241 LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 275
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 308
Score = 23.7 bits (50), Expect = 2.2
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASII 56
+ ++M+ CW RP+ L I +I +
Sbjct: 264 LFELMRMCWQYNPKMRPSFLEIISSIKEEM 293
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 283
Score = 23.6 bits (50), Expect = 2.3
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASII 56
+ ++M +CW RP I + +I
Sbjct: 242 IYQLMMQCWQQERARRPKFADIVSILDKLI 271
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 309
Score = 23.6 bits (50), Expect = 2.4
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASII 56
V +M++CW RP+ +I ++ ++
Sbjct: 255 VYDLMRQCWREKPYERPSFAQILVSLNRML 284
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 311
Score = 23.6 bits (50), Expect = 2.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASII 56
+ IM+ CW RPT +I + I I
Sbjct: 277 MYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 272
Score = 23.1 bits (49), Expect = 3.4
Identities = 6/32 (18%), Positives = 14/32 (43%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASIILS 58
+ ++M+ CW RPT ++ + +
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 301
Score = 23.3 bits (49), Expect = 3.6
Identities = 6/29 (20%), Positives = 14/29 (48%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASI 55
+ +M+ CW + RP+ I + + +
Sbjct: 271 LYNLMRLCWSKLPADRPSFCSIHRILQRM 299
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 273
Score = 22.8 bits (48), Expect = 4.9
Identities = 6/26 (23%), Positives = 13/26 (50%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTI 52
+ +M +CW RPT + ++ +
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 317
Score = 22.4 bits (47), Expect = 5.8
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60
V IM +CW A +RP + + + Q
Sbjct: 242 VYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 275
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 22.4 bits (47), Expect = 6.3
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASIILSDQ 60
+ +M +CW RPT ++ + S +
Sbjct: 243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 276
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 258
Score = 22.3 bits (47), Expect = 7.6
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIASI 55
V IM CW+ A RPT + I +
Sbjct: 230 VYTIMYSCWHEKADERPTFKILLSNILDV 258
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens)
[TaxId: 9606]}
Length = 325
Score = 22.0 bits (46), Expect = 7.8
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 27 VLKIMQECWYPVATARPTALRIKKTIAS 54
+ IMQ CW + RP+ + +
Sbjct: 296 IYIIMQSCWAFDSRKRPSFPNLTSFLGC 323
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.327 0.136 0.439
Gapped
Lambda K H
0.267 0.0465 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 262,390
Number of extensions: 8899
Number of successful extensions: 42
Number of sequences better than 10.0: 1
Number of HSP's gapped: 42
Number of HSP's successfully gapped: 22
Length of query: 69
Length of database: 2,407,596
Length adjustment: 37
Effective length of query: 32
Effective length of database: 1,899,586
Effective search space: 60786752
Effective search space used: 60786752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.5 bits)