Query psy10030
Match_columns 484
No_of_seqs 290 out of 878
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 16:05:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10030.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10030hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oc9_A UDP-N-acetylglucosamine 100.0 4E-107 2E-111 841.9 34.3 382 95-484 21-405 (405)
2 2yqc_A UDP-N-acetylglucosamine 100.0 1E-99 3E-104 809.4 33.8 403 74-483 68-486 (486)
3 1jv1_A Glcnac1P uridyltransfer 100.0 4E-98 1E-102 799.8 37.0 408 73-484 67-493 (505)
4 3ogz_A UDP-sugar pyrophosphory 100.0 2.1E-82 7.2E-87 681.1 26.8 380 39-446 47-476 (630)
5 3gue_A UTP-glucose-1-phosphate 100.0 1.8E-82 6.3E-87 667.7 19.3 349 51-434 24-392 (484)
6 3r3i_A UTP--glucose-1-phosphat 100.0 1.2E-80 4.2E-85 658.0 15.9 339 61-435 83-433 (528)
7 2oeg_A UTP-glucose-1-phosphate 100.0 3.2E-77 1.1E-81 635.7 13.5 370 51-460 24-419 (505)
8 2icy_A Probable UTP-glucose-1- 100.0 1.1E-73 3.8E-78 605.7 15.0 375 52-474 22-405 (469)
9 2i5k_A UTP--glucose-1-phosphat 100.0 1.8E-72 6.2E-77 599.5 19.6 366 69-484 60-434 (488)
10 3st8_A Bifunctional protein GL 99.7 8.8E-16 3E-20 164.2 16.3 253 108-445 11-272 (501)
11 4ecm_A Glucose-1-phosphate thy 99.3 1E-10 3.4E-15 114.9 16.2 181 107-348 22-206 (269)
12 3oam_A 3-deoxy-manno-octuloson 99.2 1.2E-10 4E-15 113.5 13.1 188 109-350 2-197 (252)
13 3juk_A UDP-glucose pyrophospho 99.1 4.7E-10 1.6E-14 110.4 13.7 197 110-348 3-217 (281)
14 1fxo_A Glucose-1-phosphate thy 99.1 1.1E-09 3.9E-14 109.1 13.9 181 109-349 2-187 (293)
15 1mc3_A Glucose-1-phosphate thy 99.1 1.7E-09 5.9E-14 108.0 15.0 179 110-348 4-187 (296)
16 3pnn_A Conserved domain protei 99.0 2.6E-09 9E-14 106.8 15.2 208 109-349 5-229 (303)
17 1lvw_A Glucose-1-phosphate thy 99.0 3E-09 1E-13 106.3 15.2 180 109-348 3-187 (295)
18 4fce_A Bifunctional protein GL 99.0 2.3E-08 7.7E-13 104.7 22.4 177 109-349 8-187 (459)
19 1tzf_A Glucose-1-phosphate cyt 99.0 4.2E-09 1.4E-13 101.8 14.2 189 110-345 3-199 (259)
20 3tqd_A 3-deoxy-manno-octuloson 98.9 6.4E-09 2.2E-13 101.9 13.5 185 109-350 9-206 (256)
21 2v0h_A Bifunctional protein GL 98.9 4.8E-08 1.7E-12 102.1 20.3 177 109-349 5-184 (456)
22 3k8d_A 3-deoxy-manno-octuloson 98.9 9E-09 3.1E-13 101.3 13.9 183 109-350 18-213 (264)
23 3oc9_A UDP-N-acetylglucosamine 98.9 5.4E-10 1.8E-14 115.8 3.6 96 15-114 21-137 (405)
24 3brk_X Glucose-1-phosphate ade 98.9 4.9E-08 1.7E-12 101.6 18.3 196 109-349 12-220 (420)
25 2qh5_A PMI, ALGA, mannose-6-ph 98.9 8.8E-09 3E-13 103.1 11.4 188 109-348 4-201 (308)
26 2e3d_A UTP--glucose-1-phosphat 98.9 2.1E-08 7.2E-13 99.7 13.8 183 109-348 8-228 (302)
27 4evw_A Nucleoside-diphosphate- 98.8 5E-09 1.7E-13 102.3 8.7 171 112-343 2-180 (255)
28 2yqc_A UDP-N-acetylglucosamine 98.8 7.6E-10 2.6E-14 117.8 1.8 53 5-57 79-131 (486)
29 1yp2_A Glucose-1-phosphate ade 98.8 4.8E-08 1.6E-12 102.4 15.3 207 109-349 20-244 (451)
30 2ux8_A Glucose-1-phosphate uri 98.8 2E-08 7E-13 99.6 11.2 186 108-349 13-227 (297)
31 1hm9_A GLMU, UDP-N-acetylgluco 98.8 8.1E-08 2.8E-12 100.9 14.8 180 110-349 12-193 (468)
32 1h7e_A 3-deoxy-manno-octuloson 98.8 1.3E-07 4.3E-12 90.7 14.9 174 109-349 2-187 (245)
33 3ogz_A UDP-sugar pyrophosphory 98.7 1.8E-09 6E-14 116.7 1.4 89 9-102 96-186 (630)
34 2pa4_A UTP-glucose-1-phosphate 98.7 4.3E-08 1.5E-12 98.7 10.9 185 110-349 13-229 (323)
35 4fcu_A 3-deoxy-manno-octuloson 98.7 2.2E-07 7.6E-12 90.7 15.0 180 110-349 2-197 (253)
36 1jv1_A Glcnac1P uridyltransfer 98.7 5.6E-09 1.9E-13 111.6 3.3 48 10-57 83-130 (505)
37 2y6p_A 3-deoxy-manno-octuloson 98.6 5.3E-07 1.8E-11 85.5 14.2 174 109-349 2-181 (234)
38 2x65_A Mannose-1-phosphate gua 98.6 1.2E-07 4.2E-12 96.2 10.2 184 110-347 2-202 (336)
39 1jyk_A LICC protein, CTP:phosp 98.6 3.5E-07 1.2E-11 88.9 12.6 167 109-349 25-194 (254)
40 1vic_A 3-deoxy-manno-octuloson 98.6 1.1E-06 3.6E-11 85.5 15.4 184 109-349 2-200 (262)
41 1ezi_A CMP-N-acetylneuraminic 98.4 3.7E-06 1.3E-10 79.7 14.4 130 109-290 4-138 (228)
42 1qwj_A Cytidine monophospho-N- 98.4 2.1E-06 7E-11 81.8 12.5 132 109-292 3-138 (229)
43 2cu2_A Putative mannose-1-phos 98.4 8.1E-07 2.8E-11 90.2 9.6 183 110-348 3-201 (337)
44 2waw_A MOBA relate protein; un 98.4 2.1E-06 7.1E-11 79.0 11.0 113 109-275 5-118 (199)
45 2ggo_A 401AA long hypothetical 98.4 5.4E-06 1.9E-10 85.1 15.2 166 111-348 2-171 (401)
46 3f1c_A Putative 2-C-methyl-D-e 98.3 2.6E-06 8.9E-11 82.2 11.1 66 109-187 3-70 (246)
47 2vsh_A TARI, 2-C-methyl-D-eryt 98.3 2.9E-06 9.8E-11 80.4 11.1 64 110-186 3-68 (236)
48 2wee_A MOBA-related protein; u 98.3 2.7E-06 9.3E-11 78.2 10.5 114 109-276 5-119 (197)
49 2xwl_A 2-C-methyl-D-erythritol 98.3 3E-06 1E-10 79.6 10.8 41 109-152 2-42 (223)
50 3rsb_A Adenosylcobinamide-phos 98.3 1.4E-06 4.7E-11 80.6 7.5 127 110-289 1-137 (196)
51 2xme_A CTP-inositol-1-phosphat 98.2 9E-06 3.1E-10 77.2 13.1 60 109-185 18-77 (232)
52 1vgw_A 4-diphosphocytidyl-2C-m 98.2 7.3E-06 2.5E-10 77.4 12.2 66 108-187 5-70 (231)
53 3q80_A 2-C-methyl-D-erythritol 98.2 3.9E-06 1.3E-10 80.7 10.3 128 108-291 6-141 (231)
54 1vpa_A 2-C-methyl-D-erythritol 98.2 3.7E-06 1.3E-10 79.8 8.7 41 109-152 13-53 (234)
55 3gue_A UTP-glucose-1-phosphate 98.2 2.5E-07 8.7E-12 97.6 0.5 92 20-118 69-173 (484)
56 3r3i_A UTP--glucose-1-phosphat 98.1 1.4E-07 4.8E-12 100.3 -2.5 73 12-88 110-187 (528)
57 1i52_A 4-diphosphocytidyl-2-C- 98.1 6.5E-06 2.2E-10 78.4 9.3 41 109-152 7-47 (236)
58 2yc3_A 2-C-methyl-D-erythritol 98.1 9.1E-06 3.1E-10 76.7 9.6 63 109-184 4-66 (228)
59 3ngw_A Molybdopterin-guanine d 98.1 2.4E-05 8.3E-10 73.9 12.0 37 110-151 1-37 (208)
60 3d5n_A Q97W15_sulso; NESG, SSR 98.0 7.8E-06 2.7E-10 76.1 7.8 38 109-151 2-39 (197)
61 1e5k_A Molybdopterin-guanine d 98.0 6E-05 2E-09 70.4 12.7 39 109-151 6-44 (201)
62 2e8b_A Probable molybdopterin- 97.8 2.8E-05 9.5E-10 72.5 7.0 38 109-151 14-51 (201)
63 1w55_A ISPD/ISPF bifunctional 97.7 0.00011 3.9E-09 75.4 9.5 40 109-151 3-42 (371)
64 2dpw_A Hypothetical protein TT 97.6 9.8E-05 3.4E-09 70.3 7.7 40 109-152 2-44 (232)
65 2icy_A Probable UTP-glucose-1- 97.5 2.6E-05 9E-10 82.5 2.8 38 16-55 68-105 (469)
66 2oeg_A UTP-glucose-1-phosphate 97.5 3.1E-05 1.1E-09 82.5 2.6 95 20-118 68-173 (505)
67 2px7_A 2-C-methyl-D-erythritol 97.3 0.00014 4.8E-09 69.5 3.7 37 109-149 25-61 (236)
68 2i5k_A UTP--glucose-1-phosphat 97.1 0.00014 4.8E-09 77.3 2.2 33 23-55 86-118 (488)
69 3q80_A 2-C-methyl-D-erythritol 92.2 0.068 2.3E-06 50.8 2.9 40 28-67 6-45 (231)
70 3st8_A Bifunctional protein GL 90.4 0.11 3.9E-06 54.7 2.7 40 27-66 10-49 (501)
71 3f1c_A Putative 2-C-methyl-D-e 90.1 0.12 4E-06 49.2 2.3 26 29-54 3-29 (246)
72 1vpa_A 2-C-methyl-D-erythritol 89.7 0.15 5.2E-06 47.5 2.7 27 28-54 12-38 (234)
73 1vgw_A 4-diphosphocytidyl-2C-m 89.5 0.14 4.8E-06 47.6 2.2 27 28-54 5-31 (231)
74 2xwl_A 2-C-methyl-D-erythritol 89.4 0.17 5.9E-06 46.6 2.8 25 30-54 3-27 (223)
75 1i52_A 4-diphosphocytidyl-2-C- 88.8 0.19 6.4E-06 47.1 2.6 26 29-54 7-32 (236)
76 2yc3_A 2-C-methyl-D-erythritol 88.3 0.18 6.1E-06 46.8 2.1 26 29-54 4-29 (228)
77 2px7_A 2-C-methyl-D-erythritol 87.9 0.2 6.9E-06 47.2 2.1 25 29-54 25-49 (236)
78 3d5n_A Q97W15_sulso; NESG, SSR 87.9 0.24 8.1E-06 45.3 2.6 24 30-55 3-26 (197)
79 1e5k_A Molybdopterin-guanine d 87.0 0.3 1E-05 44.9 2.7 25 29-54 6-30 (201)
80 2wee_A MOBA-related protein; u 85.4 0.32 1.1E-05 43.7 2.0 37 29-67 5-41 (197)
81 2waw_A MOBA relate protein; un 85.2 0.37 1.3E-05 43.3 2.3 37 29-67 5-41 (199)
82 2vsh_A TARI, 2-C-methyl-D-eryt 83.6 0.38 1.3E-05 44.6 1.7 26 29-54 2-28 (236)
83 1ezi_A CMP-N-acetylneuraminic 83.6 0.45 1.6E-05 44.1 2.2 32 30-64 5-36 (228)
84 2y6p_A 3-deoxy-manno-octuloson 81.6 0.64 2.2E-05 43.1 2.4 35 30-67 3-37 (234)
85 3ngw_A Molybdopterin-guanine d 81.4 0.61 2.1E-05 43.3 2.2 22 31-54 2-23 (208)
86 1jyk_A LICC protein, CTP:phosp 80.9 0.71 2.4E-05 44.0 2.5 26 29-54 25-53 (254)
87 2x65_A Mannose-1-phosphate gua 80.7 0.7 2.4E-05 46.2 2.5 37 31-67 3-44 (336)
88 2e8b_A Probable molybdopterin- 80.6 0.5 1.7E-05 43.3 1.3 25 29-55 14-38 (201)
89 4ecm_A Glucose-1-phosphate thy 79.6 0.9 3.1E-05 43.5 2.8 41 27-67 22-65 (269)
90 1tzf_A Glucose-1-phosphate cyt 79.6 0.72 2.5E-05 43.4 2.1 37 31-67 4-43 (259)
91 2xme_A CTP-inositol-1-phosphat 79.3 0.74 2.5E-05 42.8 2.0 25 29-54 18-42 (232)
92 1h7e_A 3-deoxy-manno-octuloson 79.2 0.86 2.9E-05 42.6 2.4 36 29-67 2-37 (245)
93 1w55_A ISPD/ISPF bifunctional 79.1 0.95 3.2E-05 46.1 2.9 39 29-67 3-41 (371)
94 4evw_A Nucleoside-diphosphate- 79.0 0.44 1.5E-05 45.6 0.3 36 32-67 2-40 (255)
95 4fce_A Bifunctional protein GL 79.0 0.88 3E-05 46.7 2.6 39 29-67 8-46 (459)
96 2v0h_A Bifunctional protein GL 78.9 0.97 3.3E-05 46.3 3.0 40 28-67 4-43 (456)
97 3juk_A UDP-glucose pyrophospho 77.0 1.2 4E-05 42.8 2.7 25 31-55 4-31 (281)
98 1lvw_A Glucose-1-phosphate thy 76.6 1.2 4E-05 43.7 2.6 25 31-55 5-32 (295)
99 1fxo_A Glucose-1-phosphate thy 75.5 0.94 3.2E-05 44.3 1.6 26 30-55 3-31 (293)
100 3rsb_A Adenosylcobinamide-phos 75.4 0.96 3.3E-05 40.7 1.5 35 32-67 3-37 (196)
101 2cu2_A Putative mannose-1-phos 75.1 1.4 4.7E-05 44.0 2.7 26 30-55 3-32 (337)
102 1mc3_A Glucose-1-phosphate thy 73.7 1.3 4.3E-05 43.5 2.0 25 31-55 5-32 (296)
103 1yp2_A Glucose-1-phosphate ade 71.9 1.4 4.8E-05 45.4 1.9 26 30-55 21-49 (451)
104 3oam_A 3-deoxy-manno-octuloson 71.7 1.8 6E-05 41.1 2.4 34 29-65 2-35 (252)
105 3brk_X Glucose-1-phosphate ade 71.3 1.7 5.7E-05 44.4 2.3 26 30-55 13-41 (420)
106 3pnn_A Conserved domain protei 70.6 1.8 6.3E-05 42.3 2.4 24 30-55 6-29 (303)
107 3tqd_A 3-deoxy-manno-octuloson 70.3 1.7 5.9E-05 41.7 2.0 33 29-64 9-41 (256)
108 2ux8_A Glucose-1-phosphate uri 69.3 2.3 7.9E-05 41.1 2.7 35 30-64 15-52 (297)
109 1vic_A 3-deoxy-manno-octuloson 68.6 2.1 7.2E-05 40.6 2.2 33 30-65 3-35 (262)
110 2pa4_A UTP-glucose-1-phosphate 67.9 2.4 8.3E-05 41.7 2.6 26 30-55 13-41 (323)
111 1hm9_A GLMU, UDP-N-acetylgluco 67.7 2.2 7.5E-05 43.9 2.3 36 32-67 14-49 (468)
112 2e3d_A UTP--glucose-1-phosphat 67.1 2.8 9.7E-05 40.6 2.9 26 30-55 9-37 (302)
113 2qh5_A PMI, ALGA, mannose-6-ph 66.1 2.3 7.8E-05 41.6 2.0 37 30-67 5-47 (308)
114 3k8d_A 3-deoxy-manno-octuloson 64.3 2.9 9.9E-05 40.3 2.3 32 21-55 9-41 (264)
115 1qwj_A Cytidine monophospho-N- 63.1 3.6 0.00012 38.1 2.6 23 29-54 3-25 (229)
116 4fcu_A 3-deoxy-manno-octuloson 55.0 5.5 0.00019 38.0 2.4 33 29-64 1-33 (253)
117 2ggo_A 401AA long hypothetical 53.2 5.7 0.00019 39.8 2.3 36 32-67 3-41 (401)
118 2dpw_A Hypothetical protein TT 52.1 6.2 0.00021 36.6 2.2 34 251-287 85-120 (232)
119 2z61_A Probable aspartate amin 20.0 2.1E+02 0.0071 27.3 7.2 32 248-279 153-184 (370)
No 1
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=100.00 E-value=4.4e-107 Score=841.94 Aligned_cols=382 Identities=39% Similarity=0.638 Sum_probs=366.9
Q ss_pred HHHHHhchhcccCCCEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHh-hCC-ccccEEEEe
Q psy10030 95 GKYRELGLKLISRGDVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEK-FGS-GCLPWFIMT 172 (484)
Q Consensus 95 ~~~~~~G~~~i~~gkvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~-~g~-~~ipl~iMt 172 (484)
.+|+++|+++|++||+|||+||||+|||||++.||+|+||++|+++||||+++++|+++|+++.++ +|. +.|||+|||
T Consensus 21 ~~~~~~Gl~~i~~gkvavvlLAGG~GTRLG~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMt 100 (405)
T 3oc9_A 21 KEHYYRGLELISQGKTALITPAGGQGSRLGFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWFLMT 100 (405)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSBCTTTTCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEE
T ss_pred HHHHHHHHHHHhcCceEEEEecCCCcccccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEe
Confidence 589999999999999999999999999999999999999999999999999999999999998765 443 789999999
Q ss_pred CCCCchHHHHHHHHcCCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeE
Q psy10030 173 SELTDRPTREYFERNGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKH 252 (484)
Q Consensus 173 S~~t~e~t~~~l~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~ 252 (484)
|++||+.|++||++|+|||++++||++|+|+++||+|.+|+++++++++++|+|+||||+|.+|.++|+|++|.++|++|
T Consensus 101 S~~t~e~t~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Giey 180 (405)
T 3oc9_A 101 NEETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKY 180 (405)
T ss_dssp CTTTHHHHHHHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCE
T ss_pred CCccHHHHHHHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCccccCCHHHHHHHHHcCCceEEEEEEccCCCcccceEEEECCeEEEEEeccCCcccccccccCCCcccccc
Q psy10030 253 IHVYCVDNILVKVGDPTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNVDGKHKIVEYSELGNCSVFETQDQTGRLKFNL 332 (484)
Q Consensus 253 i~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~ 332 (484)
++|+|+||+|++++||.|+|||++++++++++|++|++|+|++|+||++||+++||||+|++++ +++++.+|.+.|++
T Consensus 181 i~v~nvDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~dek~Gvl~~~dg~~~vvEysei~~e--~e~~~~~g~l~fn~ 258 (405)
T 3oc9_A 181 SVAHNVDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFKEEKVGVLVKEQERIKVVEYTELTDE--LNKQLSNGEFIYNC 258 (405)
T ss_dssp EEEECTTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEETTEEEEECGGGCCTT--TTCBCTTSCBSSCE
T ss_pred EEEEeCCCcccccCCHHHHHHHHHcCCCEEEEEEECCCCCCccceEEEECCeeEEEEEeeCCHH--HhhcCCCCceeecc
Confidence 9999999988999999999999999999999999999999999999999999999999999998 88899999999999
Q ss_pred cceeeeeecHHHHHHHhhccccchhhhhccCCCccCCCCCeecCCCCccchhhhhhhcccccCCceEEEEEecc-ccccc
Q psy10030 333 GSICNHYFSLECLQRMVKEDAALKFHMARKKIPCLDEQGISQRPNKPNGIKLEKFLFDAFPLCENLVAWEVTRD-EFSPL 411 (484)
Q Consensus 333 ~Ni~~~~~~l~~l~~~~~~~~~Lp~~~~~K~ip~~d~~g~~~~p~~pn~~klE~~i~D~~~~~~~~~~~~V~R~-~FsPv 411 (484)
+|||+|+|+++||++++ ...||+|+|.|||||+|++|+.+||++|||+|||+||||+|++++++.+++|+|+ ||+||
T Consensus 259 ~Ni~~h~fs~~fL~~i~--~~~l~~h~a~Kkip~~d~~g~~~~p~~~ngiklE~fifd~f~~~~~~~~~eV~R~~eF~Pl 336 (405)
T 3oc9_A 259 GHISINGYSTSFLEKAA--EYQLPYHIAKKKVPFVNEQGIVIHPSENNGIKKEIFFFDVFPLATKVSIFEIQRFIEFSAL 336 (405)
T ss_dssp EEEEEEEEEHHHHHHHT--TCCCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCSCEEEEECCHHHHCCBC
T ss_pred ceeEeeecCHHHHHHhh--hccCCcEEeccccCccCCCCCCcccCCcceeehHHHHHHHHHhccceEEEEEChHhcccce
Confidence 99999999999999998 4679999999999999999999999999999999999999999999999999999 99999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHcCcEEEcCCCCCeeEEEccceeeecCCccccccCcccCCCcccC
Q psy10030 412 KNSPLDSASDNPVTCCQAVHALHARWIETAGGVVVADETGNTVCEIAPRVSYEGEGLEERVKGKVLQTPLLLE 484 (484)
Q Consensus 412 Kn~~~~~~~ds~~ta~~~l~~~~~~~l~~~g~~~~~~~~~~~~ieisp~vsy~gE~l~~~~~~~~~~~p~~~~ 484 (484)
||+++. +.|||+|||++|+++|++||+++|++|. ++. +..|||||++||+||||++ ++|++|+.|++|+
T Consensus 337 Kn~~g~-~~dsp~tar~~l~~~~~~wl~~ag~~~~-~~~-~~~~Eispl~sy~ge~l~~-~~~~~~~~p~~~~ 405 (405)
T 3oc9_A 337 KNSLNE-SFDNVNTVKRDWYRLNIYYLKKAGAIVD-DSK-SPICEISFRKSFEEEGLKE-FKGKTIQLPFILQ 405 (405)
T ss_dssp CCCTTS-SSSSHHHHHHHHHHHHHHHHHHTTCEEE-CSS-CCCEEECTTTCSSSGGGGG-GTTCEEESCEEEC
T ss_pred ecCCCC-CCCCHHHHHHHHHHHHHHHHHHCCCEEc-CCC-CccEEeCcccccCccCccc-cCCcEecCccccC
Confidence 999988 7899999999999999999999999994 331 3579999999999999996 9999999999985
No 2
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=100.00 E-value=1e-99 Score=809.37 Aligned_cols=403 Identities=44% Similarity=0.787 Sum_probs=380.5
Q ss_pred ccccCCCCcccCCCCCChhhHHHHHHhchhcccCCCEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHH
Q psy10030 74 EVQVFPPNCLSGVNTVDASTLGKYRELGLKLISRGDVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKL 153 (484)
Q Consensus 74 ~~~p~~~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l 153 (484)
.++|+|+..+.++.+.+++++.+|++.|+++|++||++||+||||+|||||++.||+|+||++|+++||||+++++|+++
T Consensus 68 ~i~p~p~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLaGG~GTRLg~~~PK~l~~v~l~~gk~~l~~~~e~l~~~ 147 (486)
T 2yqc_A 68 NFTQLPNEQTASTLDLSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKI 147 (486)
T ss_dssp CEECCCGGGEEETTTSCHHHHHHHHHHHHHHHHTTCEEEEEEEESBCGGGTCSSBGGGCBCCCTTCCBHHHHHHHHHHHH
T ss_pred cccCCChhhccccccCChHHHHHHHHHHHHHHhhCCeEEEEEcCCccccCCCCCCCccceecCCCCCcHHHHHHHHHHHH
Confidence 48999988888888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhC--C-ccccEEEEeCCCCchHHHHHHHHcCCCCCCCCcEEEEEcCCccccccCC-cccccCCCcceeccCCC
Q psy10030 154 IEIAKEKFG--S-GCLPWFIMTSELTDRPTREYFERNGYFGLDPAHVIFFKQRSMPCFSLSG-EILLETRDRVARSPDGH 229 (484)
Q Consensus 154 ~~l~~~~~g--~-~~ipl~iMtS~~t~e~t~~~l~~~~~fgl~~~~v~~f~Q~~~P~~~~~g-~~~l~~~~~i~~~P~G~ 229 (484)
++++.+++| + +.|||+||||++||+.|++||++|+|||+++++|+||+|+++||++.+| ++++++++.++|+|+||
T Consensus 148 ~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~ 227 (486)
T 2yqc_A 148 EQLAQQYLKSTKKPIINWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGN 227 (486)
T ss_dssp HHHHHHHHTCSSCCCCEEEEEECGGGHHHHHHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCG
T ss_pred HHHhhhhcCCCcCCccCEEEEECCCCHHHHHHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCc
Confidence 998877777 3 8899999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred chHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCHHHHHHHHHcCCceEEEEEEccCCCcccceEEEE--CCeEEE
Q psy10030 230 GGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDPTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNV--DGKHKI 307 (484)
Q Consensus 230 Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~--~g~~~v 307 (484)
||+|.+|.++|+|++|.++|++|++|+|+||+|++++||.|+|||+.++++++++|++|++|+|++|++|++ +|+++|
T Consensus 228 Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~~~dg~~~v 307 (486)
T 2yqc_A 228 GGLYKALKDNGILDDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCV 307 (486)
T ss_dssp GGHHHHHHHTTHHHHHHHHTCCEEEEEETTBTTCCTTCHHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEETTTTEEEE
T ss_pred hHHHHHHHHcCcHHHHHhcCCeEEEEECCCCceeeccCHHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEEecCCCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred EEeccCCcccccccccCC--CcccccccceeeeeecHHHHHHHhhc-ccc---chhhhhccCCCccC-CCCCeecCCCCc
Q psy10030 308 VEYSELGNCSVFETQDQT--GRLKFNLGSICNHYFSLECLQRMVKE-DAA---LKFHMARKKIPCLD-EQGISQRPNKPN 380 (484)
Q Consensus 308 vEyse~~~e~~~~~~~~~--g~~~f~~~Ni~~~~~~l~~l~~~~~~-~~~---Lp~~~~~K~ip~~d-~~g~~~~p~~pn 380 (484)
|||+|++++ .++..+++ |.+.|+++|||||||++++|++++.. ... ||+|+|+|+|||+| ++|..++|++||
T Consensus 308 vEy~E~~~~-~~~~~~~~~~~~~~~~~~Ni~~~~~~l~~L~~~l~~~~~~~~~lp~~v~~Kki~~~d~~~g~~~~p~~pn 386 (486)
T 2yqc_A 308 IEYSEISQE-LANKKDPQDSSKLFLRAANIVNHYYSVEFLNKMIPKWISSQKYLPFHIAKKKIPSLNLENGEFYKPTEPN 386 (486)
T ss_dssp ECGGGSCHH-HHHCEETTEEEEESSCEEEEEEEEEEHHHHHHHHHHHTTCTTTSCCEEEEECCCEECTTTCCEECCSSCC
T ss_pred EEEecCCHH-HhhcccccccccccccceeEEEEEEeHHHHHHHHHhhcCcccCCcceEeccccCccccccCeeccCCCCC
Confidence 999999998 66666665 77889999999999999999994443 556 99999999999999 579999999999
Q ss_pred cchhhhhhhcccccCC--ceEEEEEecc-ccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHcCcEEEcCCCCCeeEEE
Q psy10030 381 GIKLEKFLFDAFPLCE--NLVAWEVTRD-EFSPLKNSPLDSASDNPVTCCQAVHALHARWIETAGGVVVADETGNTVCEI 457 (484)
Q Consensus 381 ~~klE~~i~D~~~~~~--~~~~~~V~R~-~FsPvKn~~~~~~~ds~~ta~~~l~~~~~~~l~~~g~~~~~~~~~~~~iei 457 (484)
|+|||+||||+|++++ ++++++|+|+ ||+||||+++. +.|||+|||.+||++|++||+++|+++ .++ ..|||
T Consensus 387 ~~klE~~~~d~~~~~~l~~~~~~~V~R~~~FsPvKn~~~~-~~dsp~ta~~~l~~~~~~~l~~aG~~~-~~~---~~~ei 461 (486)
T 2yqc_A 387 GIKLEQFIFDVFPSVELNKFGCLEVDRLDEFSPLKNADGA-KNDTPTTCRNHYLERSSKWVIQNGGVI-DNQ---GLVEV 461 (486)
T ss_dssp EEEEECCGGGGGGGSCGGGEEEEEECHHHHCCBCCSCTTS-SSSSHHHHHHHHHHHHHHHHHHTTCEE-CTT---CCCBC
T ss_pred eeeeeehHhhHHhhcccCceEEEEECcccceeeecCCCCC-CCCCHHHHHHHHHHHHHHHHHHCCCee-cCC---CcEEE
Confidence 9999999999999999 9999999997 99999999987 789999999999999999999999999 332 36999
Q ss_pred ccceeeecCCccccccCcccCCCccc
Q psy10030 458 APRVSYEGEGLEERVKGKVLQTPLLL 483 (484)
Q Consensus 458 sp~vsy~gE~l~~~~~~~~~~~p~~~ 483 (484)
||+|||+||||+ .++||+|+.|++|
T Consensus 462 sp~~sy~ge~l~-~~~~~~~~~~~~~ 486 (486)
T 2yqc_A 462 DSKTSYGGEGLE-FVNGKHFKNGDII 486 (486)
T ss_dssp CTTTCSSSTTCG-GGTTCEECTTCBC
T ss_pred cceeeECCCCch-hhcCccccCCccC
Confidence 999999999999 8899999999986
No 3
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=100.00 E-value=4e-98 Score=799.84 Aligned_cols=408 Identities=49% Similarity=0.893 Sum_probs=385.5
Q ss_pred cccccCCCCcccCCCCCChhhHHHHHHhchhcccCCCEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHH
Q psy10030 73 SEVQVFPPNCLSGVNTVDASTLGKYRELGLKLISRGDVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDK 152 (484)
Q Consensus 73 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~ 152 (484)
++++|+|+..+.++.+ +.+++.+|+++|+++|++||+++|+||||+|||||++.||+|+||++++++||||+++++|++
T Consensus 67 ~~i~p~p~~~~~~~~~-~~~~~~~~~~~Gl~~i~~~kvavViLAGG~GTRLg~~~PK~l~pv~~~~gk~~le~~~e~l~~ 145 (505)
T 1jv1_A 67 ARMEPVPREVLGSATR-DQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILK 145 (505)
T ss_dssp -CCBCCCGGGEEETTT-TGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHH
T ss_pred ccccCCChHhcccccC-ChHHHHHHHHHhHHhhccCceEEEEEcCCccccCCCCCCCccceeecCCCCcHHHHHHHHHHH
Confidence 4689999888887766 678889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCC-ccccEEEEeCCCCchHHHHHHHHcCCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCch
Q psy10030 153 LIEIAKEKFGS-GCLPWFIMTSELTDRPTREYFERNGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGG 231 (484)
Q Consensus 153 l~~l~~~~~g~-~~ipl~iMtS~~t~e~t~~~l~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Gg 231 (484)
+|+++.++||. +.+||+||||++||+.|++||++|++||+++++|++|+|+++||++.+|++++++++.++|+|+||||
T Consensus 146 lq~la~~~~G~~~~ip~vImtS~~t~e~t~~~f~~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG 225 (505)
T 1jv1_A 146 LQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGG 225 (505)
T ss_dssp HHHHHHHHHSSCCCCCEEEEECTTTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGG
T ss_pred HHHHHHHhcCCCccceEEEEecCCCHHHHHHHHHhhhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchH
Confidence 99999888886 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCHHHHHHHHHcCCceEEEEEEccCCCcccceEEEECCeEEEEEec
Q psy10030 232 LYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDPTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNVDGKHKIVEYS 311 (484)
Q Consensus 232 i~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~~g~~~vvEys 311 (484)
+|++|.++|++++|+++|++|++|+|+||+|++++||.++|||..++++++++|++|+.+++++|+||.++|++++|||+
T Consensus 226 ~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~~~e~~Gvl~~~dg~~~vvEy~ 305 (505)
T 1jv1_A 226 LYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYS 305 (505)
T ss_dssp HHHHHHHTTHHHHHHHTTCCEEEEEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEETTEEEEECGG
T ss_pred HHHHHHHcCcHHHHHhcCCCEEEEEECCccccccchHHHHHHHHHcCCCEEEEEEEccCCccCcceEEEECCeEEEEEEe
Confidence 99999999999999999999999999999989999999999999999999999999888999999999999999999999
Q ss_pred cCCcccccccccCCCcccccccceeeeeecHHHHHHHhhc-cccchhhhhccCCCccCCCCCeecCCCCccchhhhhhhc
Q psy10030 312 ELGNCSVFETQDQTGRLKFNLGSICNHYFSLECLQRMVKE-DAALKFHMARKKIPCLDEQGISQRPNKPNGIKLEKFLFD 390 (484)
Q Consensus 312 e~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~l~~~~~~-~~~Lp~~~~~K~ip~~d~~g~~~~p~~pn~~klE~~i~D 390 (484)
|++++ .++..+++|.+.|+++|||||||++++|+++.+. ...||+|+|+|++||+|++|+.++|++|||+|||+||||
T Consensus 306 E~p~~-~~~~~~~~g~~~~~~~N~~~~~f~l~~L~~i~~~~~~~l~~hv~~Kkip~~d~~g~~v~P~~pn~~klE~~i~d 384 (505)
T 1jv1_A 306 EISLA-TAQKRSSDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFD 384 (505)
T ss_dssp GSCHH-HHHCBCTTSSBSSCEEEEEEEEEEHHHHHHHHHTTGGGCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGG
T ss_pred eCCHH-HhhhcccccccccceeeEEEEEecHHHHHHHHHhhcccCCceecccccccccCCCCCcCCCCCCceeHHHHHHH
Confidence 99998 7677777888999999999999999999999875 678999999999999998899999999999999999999
Q ss_pred ccccCCceEEEEEecc-ccccccCCCCCCC-CCCHHHHHHHHHHHHHHHHHHcCcEEEcCCC---------------CCe
Q psy10030 391 AFPLCENLVAWEVTRD-EFSPLKNSPLDSA-SDNPVTCCQAVHALHARWIETAGGVVVADET---------------GNT 453 (484)
Q Consensus 391 ~~~~~~~~~~~~V~R~-~FsPvKn~~~~~~-~ds~~ta~~~l~~~~~~~l~~~g~~~~~~~~---------------~~~ 453 (484)
+|++++++++++|+|+ ||+||||+++. + .|||+|||++||++|++||+++|+++ .+++ .+.
T Consensus 385 ~~~~~~~~~~~~V~R~~~FsPvKn~~~~-~~~dsp~ta~~~l~~~~~~~l~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~ 462 (505)
T 1jv1_A 385 IFQFAKKFVVYEVLREDEFSPLKNADSQ-NGKDNPTTARHALMSLHHCWVLNAGGHF-IDENGSRLPAIPRLKDANDVPI 462 (505)
T ss_dssp GGGGCSSEEEEEECHHHHCCBCCSCTTS-SSSSSHHHHHHHHHHHHHHHHHHTTCEE-BCTTCCBCCSSCCCCSTTCCCC
T ss_pred HHhhcCceEEEEECcccceeeccCCCCC-CCCCCHHHHHHHHHHHHHHHHHHCCCee-cccccccccccccccccccCCC
Confidence 9999999999999999 99999999987 5 79999999999999999999999999 3332 125
Q ss_pred eEEEccceeeecCCccccccCcccCCCcccC
Q psy10030 454 VCEIAPRVSYEGEGLEERVKGKVLQTPLLLE 484 (484)
Q Consensus 454 ~ieisp~vsy~gE~l~~~~~~~~~~~p~~~~ 484 (484)
.|||||++||+||||+++++||+|+.|++||
T Consensus 463 ~~Eisp~~sy~ge~l~~~~~~~~~~~~~~~~ 493 (505)
T 1jv1_A 463 QCEISPLISYAGEGLESYVADKEFHAPLIID 493 (505)
T ss_dssp CEEECTTTCSSSCSCHHHHTTCEECSSEEEE
T ss_pred eEEECCccccCCCCchHHhcCCccCCCceec
Confidence 7999999999999999999999999999885
No 4
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=100.00 E-value=2.1e-82 Score=681.07 Aligned_cols=380 Identities=19% Similarity=0.266 Sum_probs=329.0
Q ss_pred cccccCCCCCCccccccHHHHhhhhhhccc----cccccccccCCCCcccCCCCCChhhHHHHHHhchhcccCCCEEEEE
Q psy10030 39 QGTRLGADYPNRIESIKIQVYIGHGYQELS----GVQLSEVQVFPPNCLSGVNTVDASTLGKYRELGLKLISRGDVAVIV 114 (484)
Q Consensus 39 qg~~l~~~~pkg~~~i~~~~f~~~~~~~L~----ai~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvi 114 (484)
|-.+++.+||.|+..+ +.+..+.+. ....+.++|+|..+..+..+.+++++.+|+++|+++|+ |+|||+
T Consensus 47 qL~~~d~~~~~gl~~~-----~~~a~~~l~~~~~~~~~~~~~p~P~~~~~~~l~~~~~~~~~~~~~Gl~~i~--kvavvl 119 (630)
T 3ogz_A 47 DLYMFSNMYPGGVAQY-----IRNGHELLARESEEVDFAALEMPPLIFEAPSLHRRTAERTALENAGTAMLC--KTVFVL 119 (630)
T ss_dssp HHHHGGGTSTTHHHHH-----HHHHHHHHHHHTSCCCCSEEECCSCEEECCCTTCCCHHHHHHHHHHHHHGG--GEEEEE
T ss_pred HHHhhChhhhhhHHHH-----HHHHHHHhhccccCCcccccccCCCCCccccccCCHHHHHHHHHHhHHHHh--hceEEE
Confidence 4457888899888742 222222111 11235688887766666666678899999999999998 999999
Q ss_pred EcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcCCCCCCC
Q psy10030 115 LAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNGYFGLDP 194 (484)
Q Consensus 115 LaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~~fgl~~ 194 (484)
||||||||||+++||+++||++++++||||+++++|++ ++| +.|||+||||+.||++|++||++ ||+++
T Consensus 120 laGGlGTRLG~~~pK~~lpv~~~s~ks~lql~~e~i~~-------~~g-~~iPl~IMTS~~T~~~T~~~~~~---fgl~~ 188 (630)
T 3ogz_A 120 VAGGLGERLGYSSIKVSLPVETATNTTYLAYYLRWAQR-------VGG-KEVPFVIMTSDDTHDRTLQLLRE---LQLEV 188 (630)
T ss_dssp ECCCEEGGGTEEEEGGGSBSCTTTCCBHHHHHHHHHHH-------HHC-TTCCEEEEECTTTHHHHHHHHHH---TTCCC
T ss_pred ecCCcccccCCCCCcccceecCCCCCcHHHHHHHHHHH-------HhC-CCCcEEEEecccchHHHHHHHHH---hCCCc
Confidence 99999999999999999999999999999999999982 467 99999999999999999999999 99999
Q ss_pred CcEEEEEcCCccccc-cCCcccccCCCcceeccCCCchHhHHHhhcC------------------hHHHHHHcCCeEEEE
Q psy10030 195 AHVIFFKQRSMPCFS-LSGEILLETRDRVARSPDGHGGLYHALGATG------------------ILDTMHTRGIKHIHV 255 (484)
Q Consensus 195 ~~v~~f~Q~~~P~~~-~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G------------------~l~~l~~~G~~~i~v 255 (484)
+||+||+|+++||++ .+|+++++++++++|+|+||||+|.+|+++| +|++|+++|++|+||
T Consensus 189 ~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v 268 (630)
T 3ogz_A 189 PNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVF 268 (630)
T ss_dssp TTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEEE
T ss_pred ccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEE
Confidence 999999999999996 7799999999999999999999999999999 999999999999999
Q ss_pred EeCCCCccccCCHHHHHHHHHcCCceEEEEEEccCCCcccceEEEE---CCeE---EEEEeccCCcccccccccCCCc--
Q psy10030 256 YCVDNILVKVGDPTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNV---DGKH---KIVEYSELGNCSVFETQDQTGR-- 327 (484)
Q Consensus 256 ~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~---~g~~---~vvEyse~~~e~~~~~~~~~g~-- 327 (484)
+|+||+|++++||.||||+++++++|+++||+|+ |.|++|++|+. +|++ +||||+|++++ +++.++++|+
T Consensus 269 ~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~-p~E~vG~l~~~~~~dGk~~~v~vVEYsei~~~-~~~~~~~~g~~~ 346 (630)
T 3ogz_A 269 IQDTNAGATITIPISLALSAEHSLDMNFTCIPRV-PKEPIGLLCRTKKNSGDPWLVANVEYNVFAEV-SRALNKDGGDEV 346 (630)
T ss_dssp ECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCC-SSCSSCEEEEEESSTTSCCEEEEECHHHHHHH-HHHC--------
T ss_pred EccCCccccccCHHHhHHHHhcCCCEEEEEEECC-CCcceeeEEEEecCCCceeeeeEEEeccCCHh-HhhccCCCcccc
Confidence 9999999999999999999999999999999986 99999999985 8999 56999999999 8887777776
Q ss_pred -----ccccccceeeeeecHHHHHH-HhhccccchhhhhccCCCccCCCCCeecCCCCccchhhhhhhcccccCC----c
Q psy10030 328 -----LKFNLGSICNHYFSLECLQR-MVKEDAALKFHMARKKIPCLDEQGISQRPNKPNGIKLEKFLFDAFPLCE----N 397 (484)
Q Consensus 328 -----~~f~~~Ni~~~~~~l~~l~~-~~~~~~~Lp~~~~~K~ip~~d~~g~~~~p~~pn~~klE~~i~D~~~~~~----~ 397 (484)
+.|.+||||||||+|+.+.+ +.+....||+++|+| |.|.++..+ ++++||||||||++.+|+ +
T Consensus 347 ~~~~~~~~f~GNtNnl~~~L~a~~~~l~~~~~~ip~~vNpK---~~d~~~~~~----~~~~qLEt~m~d~~~~F~~~~~~ 419 (630)
T 3ogz_A 347 SDPTGFSPFPGSVNTLVFKLSSYVDRLRESHGIVPEFINPK---YSDETRRSF----KKPARIESLMQDIALLFSEDDYR 419 (630)
T ss_dssp ----CCCSSCEEEEEEEEEHHHHHHHHHHHTTCCCCEECCC---BSSSSSCCB----SSCBCEECCGGGGGGGCCTTTCC
T ss_pred ccccccccccccceeeeEEHHHHHHHHHhccCccceecCCc---ccCCccccc----CcchhhhhHHHHHHHhccccCcc
Confidence 67778899999999996554 444478899999999 667655443 567999999999776664 6
Q ss_pred eEEEEEeccccccccCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHcCcEEE
Q psy10030 398 LVAWEVTRDEFSPLKNSP---------LDSASDNPVTCCQAVHALHARWIETAGGVVV 446 (484)
Q Consensus 398 ~~~~~V~R~~FsPvKn~~---------~~~~~ds~~ta~~~l~~~~~~~l~~~g~~~~ 446 (484)
+++++|+|+||+||||+. +. +.|||+||+.|+|+++++||+++|+++.
T Consensus 420 v~~~~V~R~~F~PVKn~~~~a~~k~~~g~-~~~sp~t~~~dly~~~~~~L~~aG~~v~ 476 (630)
T 3ogz_A 420 VGGTVFERFSYQPVKNSLEEAAGLVAQGN-GAYCAATGEAAFYELQRRRLKAIGLPLF 476 (630)
T ss_dssp EEEEECCGGGCCBCCBCHHHHHHHHHTTC-CCCBHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred eeEEEECCCeeecccCChhHhhhhhccCC-CcCChHHHHHHHHHHHHHHHHHcCceec
Confidence 799999999999999998 55 6899999999999999999999999984
No 5
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=100.00 E-value=1.8e-82 Score=667.71 Aligned_cols=349 Identities=18% Similarity=0.227 Sum_probs=309.8
Q ss_pred cccccHHHHhhhhhhcc-----ccccccccccCCCCcccCCCCCChhhHHHHHHhchhcccCCCEEEEEEcCCCCccccc
Q psy10030 51 IESIKIQVYIGHGYQEL-----SGVQLSEVQVFPPNCLSGVNTVDASTLGKYRELGLKLISRGDVAVIVLAGGQGTRLGA 125 (484)
Q Consensus 51 ~~~i~~~~f~~~~~~~L-----~ai~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavviLaGG~GTRLG~ 125 (484)
+.+..+..| .++|.++ ..|+|++|+|+. .+.++.++... ..|+++|+ |+|||+||||||||||+
T Consensus 24 ~~~~~~~~f-~~~~~~~~~~~~~~i~~~~i~p~~--~~~~~~~l~~~------~~G~~~L~--kvavvlLaGGlGTRLG~ 92 (484)
T 3gue_A 24 VEEKCIHIF-LIQHALVRKGETGYIPEKSISPVE--SLPFLQGIETK------GENTALLR--QAVVLKLNGGLGTGMGL 92 (484)
T ss_dssp CCHHHHHHH-HHHHHHHHTTCCCCCCGGGCEECC--CCCBHHHHCCS------SCCHHHHT--TEEEEEEECCCCGGGTC
T ss_pred CCHHHHHHH-HHHHHHHhcCCCCccCHhhCCChh--ccCChhhcCCc------hHHHHHHh--hcEEEEEcCCcccccCC
Confidence 788888877 4444332 138999999986 34444332221 16899998 99999999999999999
Q ss_pred cCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcCCCCCCCCcEEEEEcCCc
Q psy10030 126 DYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNGYFGLDPAHVIFFKQRSM 205 (484)
Q Consensus 126 ~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~~fgl~~~~v~~f~Q~~~ 205 (484)
++|||++||+ +++||||++++||++++ ++|| +.|||+||||+.||++|++||++|+|||+++++|++|+|+++
T Consensus 93 ~~pKg~~~v~--sgksflql~~eqI~~l~----~~~~-~~iPl~IMTS~~T~~~T~~~~~k~~~Fgl~~~~v~~F~Q~~~ 165 (484)
T 3gue_A 93 NGPKSLLQVK--NGQTFLDFTALQLEHFR----QVRN-CNVPFMLMNSFSTSGETKNFLRKYPTLYEVFDSDIELMQNRV 165 (484)
T ss_dssp SSCGGGSEEE--TTEEHHHHHHHHHHHHH----HHHT-CCCCEEEEECTTTHHHHHHHGGGCHHHHTTCCCCCEEECCCE
T ss_pred CCCceeeecC--CCCcHHHHHHHHHHHHH----HHcC-CCceEEEECCcchhHHHHHHHHhCcccCCCccceEEEEeCce
Confidence 9999999996 99999999999999999 4577 999999999999999999999999999999999999999999
Q ss_pred cccccCCc--ccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCHHHHHHHHHcCCceEE
Q psy10030 206 PCFSLSGE--ILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDPTFLGYCVEQGAHCGV 283 (484)
Q Consensus 206 P~~~~~g~--~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~ 283 (484)
||++.+|+ ++++++++++|+|+||||+|.+|+++|+|++|+++|++|+||+|+|| |++++||.||||++++++++++
T Consensus 166 P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDN-L~a~~Dp~~lG~~~~~~~d~~~ 244 (484)
T 3gue_A 166 PKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDN-LGATLDVRLLDYMHEKQLGFLM 244 (484)
T ss_dssp ECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTC-TTCCCCHHHHHHHHHTTCSEEE
T ss_pred eeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCC-cccccCHHHHHHHHhcCCCEEE
Confidence 99999997 44677889999999999999999999999999999999999999999 6899999999999999999999
Q ss_pred EEEEccCCCcccceEEEE----------CCeEEEEEeccCCcccccccccCCCcccccccceeeeeecHHHHHHHhhc--
Q psy10030 284 KVVEKITPGESLGVLCNV----------DGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLECLQRMVKE-- 351 (484)
Q Consensus 284 ~vv~k~~~~e~~G~l~~~----------~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~l~~~~~~-- 351 (484)
|||+|+.++|++|++|++ +|+++++||+|+++++..++++.+|.+ ++|+||+|+++++|+++++.
T Consensus 245 kvv~Kt~~dekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~~f~~~~g~~---~FNtnNi~~~l~~l~~~l~~~~ 321 (484)
T 3gue_A 245 EVCRRTESDKKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDEDSFQNIAKHC---FFNTNNIWINLMELKKMMDEQL 321 (484)
T ss_dssp EEEECCTTCCSSEEEEEEC--------CCCEEEEEEGGGSCGGGHHHHTCTTTSC---EEEEEEEEEEHHHHHHHHHHTT
T ss_pred EEEECCCCCCceeEEEEEccccccccCCCCCEEEEEeccCCHHHHhhhcCCCCce---EeEeeeEEEEHHHHHHHHHhcc
Confidence 999999999999999998 999999999999999555578887755 45899999999999888875
Q ss_pred -cccchhhhhccCCCccCCCCCeecCCCCccchhhhhhhcccccCCceEEEEEeccccccccCCCCCCCCCCHHHHHHHH
Q psy10030 352 -DAALKFHMARKKIPCLDEQGISQRPNKPNGIKLEKFLFDAFPLCENLVAWEVTRDEFSPLKNSPLDSASDNPVTCCQAV 430 (484)
Q Consensus 352 -~~~Lp~~~~~K~ip~~d~~g~~~~p~~pn~~klE~~i~D~~~~~~~~~~~~V~R~~FsPvKn~~~~~~~ds~~ta~~~l 430 (484)
...||+|+|+|+++. .+|++||++|||+||||+|++++++.+++|+|+||+||||++ ++..+|+|+
T Consensus 322 g~~~Lp~~vn~K~id~-------~k~~~~~~iqlE~~~~d~~~~~~~~~~ieV~R~rF~PvKn~s------dLl~~~Sdl 388 (484)
T 3gue_A 322 GVLRLPVMRNPKTVNP-------QDSQSTKVYQLEVAMGAAISLFDRSEAVVVPRERFAPVKTCS------DLLALRSDA 388 (484)
T ss_dssp TCCCCCCEEEEEESST-------TCTTSCEEEEEECCGGGGGTTSSSEEEEECCGGGCCCCSSHH------HHHHHHSTT
T ss_pred CcCCCCcEeccceecC-------CCCCCCCEeehHHHHHHHHHhCCccEEEEEChhhccccccch------HHHHHhhhc
Confidence 346899999998843 367899999999999999999999999999999999999994 788999998
Q ss_pred HHHH
Q psy10030 431 HALH 434 (484)
Q Consensus 431 ~~~~ 434 (484)
|.++
T Consensus 389 y~l~ 392 (484)
T 3gue_A 389 YQVT 392 (484)
T ss_dssp EEEC
T ss_pred eecc
Confidence 8754
No 6
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=100.00 E-value=1.2e-80 Score=658.02 Aligned_cols=339 Identities=22% Similarity=0.305 Sum_probs=296.7
Q ss_pred hhhhhc-cccccccccccCCCCcccCCCCCChhhHHHHHHhchhcccCCCEEEEEEcCCCCccccccCCCccccccCCCC
Q psy10030 61 GHGYQE-LSGVQLSEVQVFPPNCLSGVNTVDASTLGKYRELGLKLISRGDVAVIVLAGGQGTRLGADYPKGMYNIGLPSG 139 (484)
Q Consensus 61 ~~~~~~-L~ai~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavviLaGG~GTRLG~~~PKg~~~i~l~~~ 139 (484)
.+++.. -..++|++|+|+|++.+.++.++ ..|+..+...+..+|+|||+||||||||||+++||+++|| +++
T Consensus 83 ~r~l~~~~~~~~~~~i~p~p~~~~~~~~~l-----~~~~~~~~~~~~l~kvavvlLaGGlGTRLG~~~PK~~i~V--~sg 155 (528)
T 3r3i_A 83 HRFLQEKGPSVDWGKIQRPPEDSIQPYEKI-----KARGLPDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIGV--RNE 155 (528)
T ss_dssp HHHHHC-------CCCCCCCTTTSEEHHHH-----TTSCCCCSSCTTCTTEEEEEECCCBCTTTTCSSBGGGSEE--ETT
T ss_pred HHHHhhccCCCCHHHCcCCCHHHccCHhhc-----CCccccchhhhhcCceEEEEeCCCCccccCCCCCccceec--CCC
Confidence 444432 23578999999999988877543 3344455566788999999999999999999999999998 799
Q ss_pred CcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcCCCCCCCCcEEEEEcCCccccccCCcccccC-
Q psy10030 140 KSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNGYFGLDPAHVIFFKQRSMPCFSLSGEILLET- 218 (484)
Q Consensus 140 ~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~- 218 (484)
+||||++++||++++ ++|| +.|||+||||++||++|++||++|+||| .+|++|+|+++||++.+|+++++.
T Consensus 156 ktflql~~eqI~~l~----~~~g-~~IPl~IMTS~~T~~~T~~~f~k~~~fg---~~V~~F~Q~~~P~i~~dg~l~l~~~ 227 (528)
T 3r3i_A 156 NTFLDLTVQQIEHLN----KTYN-TDVPLVLMNSFNTDEDTKKILQKYNHCR---VKIYTFNQSRYPRINKESLLPVAKD 227 (528)
T ss_dssp EEHHHHHHHHHHHHH----HHHT-CCCCEEEEECTTTHHHHHSSCGGGTTSS---CCEEEEECCCBCCEETTTCCCC---
T ss_pred CcHHHHHHHHHHHHH----HHhC-CCCCEEEEeccchhHHHHHHHHhcCccC---CCeEEEEeCCeeeEecCCceecccc
Confidence 999999999999998 5678 9999999999999999999999999998 579999999999999999999986
Q ss_pred -----CCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCHHHHHHHHHc----CCceEEEEEEcc
Q psy10030 219 -----RDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDPTFLGYCVEQ----GAHCGVKVVEKI 289 (484)
Q Consensus 219 -----~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp~~lg~~~~~----~~~~~~~vv~k~ 289 (484)
+++++|+|+||||+|.+|+++|+|++|.++|++|++|+|+||++++ +||.||||++.+ +++++++|++|+
T Consensus 228 ~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~-vDp~~Lg~~~~~~~~~~~d~~~kVv~Kt 306 (528)
T 3r3i_A 228 VSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGAT-VDLYILNHLMNPPNGKRCEFVMEVTNKT 306 (528)
T ss_dssp ----------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCC-CCHHHHHHHSSCSSSCCCSEEEEECCCC
T ss_pred cccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccc-cCHHHHHHHHhcccccCCcEEEEEeEcc
Confidence 7899999999999999999999999999999999999999999875 699999999998 999999999999
Q ss_pred CCCcccceEEEECCeEEEEEeccCCcccccccccCCCcccccccceeeeeecHHHHHHHhhc-cccchhhhhccCCCccC
Q psy10030 290 TPGESLGVLCNVDGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLECLQRMVKE-DAALKFHMARKKIPCLD 368 (484)
Q Consensus 290 ~~~e~~G~l~~~~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~l~~~~~~-~~~Lp~~~~~K~ip~~d 368 (484)
.|+|++|++|+++|++++|||+|+++++..+ .+|.+.|++||||||||+++||+++++. ...||+|+|+|++|
T Consensus 307 ~~dek~Gvl~~~dGk~~vvEyseip~e~~~~---~~g~~~f~~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd--- 380 (528)
T 3r3i_A 307 RADVKGGTLTQYEGKLRLVEIAQVPKAHVDE---FKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLD--- 380 (528)
T ss_dssp TTCCSSCEEECSSSSCEEECTTSSCGGGTTT---SSCSSSCCCCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCS---
T ss_pred ccCCcccEEEEECCeEEEEEecCCChhHhhc---cCCcccCCeEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccC---
Confidence 9999999999999999999999999994433 3567899999999999999999999987 67899999999875
Q ss_pred CCCCeecCCCCccchhhhhhhcccccCCceEEEEEeccccccccCCCCCCCCCCHHHHHHHHHHHHH
Q psy10030 369 EQGISQRPNKPNGIKLEKFLFDAFPLCENLVAWEVTRDEFSPLKNSPLDSASDNPVTCCQAVHALHA 435 (484)
Q Consensus 369 ~~g~~~~p~~pn~~klE~~i~D~~~~~~~~~~~~V~R~~FsPvKn~~~~~~~ds~~ta~~~l~~~~~ 435 (484)
.++|++|+|++|+|+|++++++.+++|+|+||+||||++ +....++|+|.+..
T Consensus 381 --------~~~~viqlEt~igd~i~~f~~~~~i~VpR~rF~PvKn~s------dLll~~Sdly~l~~ 433 (528)
T 3r3i_A 381 --------GGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTS------DLLLVMSNLYSLNA 433 (528)
T ss_dssp --------SSSCEEEEEBCSTTCSTTSSSCCCEECCGGGCCBCCSHH------HHHHHHSTTSEEET
T ss_pred --------CCCCEEEeHHHHHHHHHhccCcEEEEEehHHcccccchH------HHHHHhcceeEeeC
Confidence 268899999999999999999999999999999999995 78888999888653
No 7
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=100.00 E-value=3.2e-77 Score=635.75 Aligned_cols=370 Identities=18% Similarity=0.250 Sum_probs=325.1
Q ss_pred cccccHHHHhh---hhhhc-cccccccccccCCCCcccCCCCCChhhHHHHHHhchhcccCCCEEEEEEcCCCCcccccc
Q psy10030 51 IESIKIQVYIG---HGYQE-LSGVQLSEVQVFPPNCLSGVNTVDASTLGKYRELGLKLISRGDVAVIVLAGGQGTRLGAD 126 (484)
Q Consensus 51 ~~~i~~~~f~~---~~~~~-L~ai~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavviLaGG~GTRLG~~ 126 (484)
+.+.+++.|.. ++... -..++|++|+|+ +.+.++.++.. ..|+++|+ |++||+||||+|||||++
T Consensus 24 ~~~~~~~~f~~~~~~~~~~~~~~i~~~~i~p~--~~~~~~~~~~~-------~~g~~~l~--k~avViLAGGlGTRLg~~ 92 (505)
T 2oeg_A 24 VNEACIRTFIAQHVMVSKGETGSIPDSAIMPV--DSLDALDSLTI-------ECDNAVLQ--STVVLKLNGGLGTGMGLC 92 (505)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCCCCCGGGCBCC--CCCCBGGGCCC-------CCCHHHHH--TEEEEEEECCCCGGGTCC
T ss_pred CChHHHHHHHHHHHHHHhcCCCCcChhhcCCh--hhccChhhcch-------hHHHHHHh--cceEEEEcCCcccccCCC
Confidence 66777777632 22211 124788899998 55665554433 37999998 999999999999999999
Q ss_pred CCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHH-HcCCCCCCCCcEEEEEcCCc
Q psy10030 127 YPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFE-RNGYFGLDPAHVIFFKQRSM 205 (484)
Q Consensus 127 ~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~-~~~~fgl~~~~v~~f~Q~~~ 205 (484)
.||+|+||+ +++||||+++++|++++ .+|| +.|||+||||++||+.|++||+ +|++||+++++|++|+|+++
T Consensus 93 ~PK~llpV~--~gk~fLe~~ie~l~~~~----~~~g-~~ip~viMtS~~t~e~t~~~f~~~~~~fGl~~~~I~~f~Q~~~ 165 (505)
T 2oeg_A 93 DAKTLLEVK--DGKTFLDFTALQVQYLR----QHCS-EHLRFMLMDSFNTSASTKSFLKARYPWLYQVFDSEVELMQNQV 165 (505)
T ss_dssp SCGGGSEEE--TTEEHHHHHHHHHHHHH----HHTC-TTCEEEEEECHHHHHHHHHHHHHHCHHHHTTCCCCCEEECCCE
T ss_pred CCCcccccC--CCCcHHHHHHHHHHHHH----HhcC-CCcCEEEEeCCCCHHHHHHHHhhhhhccCCCccceEEEEEcCE
Confidence 999999996 79999999999999988 5567 8999999999999999999999 99999999999999999999
Q ss_pred cccccCC-ccc-ccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCHHHHHHHHHcCCceEE
Q psy10030 206 PCFSLSG-EIL-LETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDPTFLGYCVEQGAHCGV 283 (484)
Q Consensus 206 P~~~~~g-~~~-l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~ 283 (484)
||++.+| +++ ++.+..++|+|+||||+|.+|+++|++++|.++|++|++|+|+||+ ++.+||.++|||.++++++++
T Consensus 166 P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL-~~~~D~~llg~~~~~~ad~~~ 244 (505)
T 2oeg_A 166 PKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNL-GATIDKRVLAYMEKEKIDFLM 244 (505)
T ss_dssp ECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCT-TCCCCHHHHHHHHHHTCSEEE
T ss_pred EeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCcc-ccccCHHHHHHHHhcCCcEEE
Confidence 9999998 655 6777789999999999999999999999999999999999999996 788999999999999999999
Q ss_pred EEEEccCCCcccceEEE-------ECCe-------EEEEEeccCCcccccccccCCCcccccccceeeeeecHHHHHHHh
Q psy10030 284 KVVEKITPGESLGVLCN-------VDGK-------HKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLECLQRMV 349 (484)
Q Consensus 284 ~vv~k~~~~e~~G~l~~-------~~g~-------~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~l~~~~ 349 (484)
+|++|+.+++++|++|. .+|+ ++++||+|+++++..++ +|.+.|++||||||||+++||++++
T Consensus 245 ~v~~k~~~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~---~g~~~f~~~Ninn~~~~l~~l~~~~ 321 (505)
T 2oeg_A 245 EVCRRTESDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESF---QDINKYSFFNTNNLWIRLPVLLETM 321 (505)
T ss_dssp EEEECCTTCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHHH---HCTTTTCEEEEEEEEEEHHHHHHHH
T ss_pred EEEEecCCccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhcc---cCccccCeeEEEEEEEEHHHHHHHH
Confidence 99999999999999999 7999 99999999999944333 4678999999999999999999988
Q ss_pred hc---cccchhhhhccCCCccCCCCCeecCCCCccchhhhhhhcccccCCceEEEEEeccccccccCCCCCCCCCCHHHH
Q psy10030 350 KE---DAALKFHMARKKIPCLDEQGISQRPNKPNGIKLEKFLFDAFPLCENLVAWEVTRDEFSPLKNSPLDSASDNPVTC 426 (484)
Q Consensus 350 ~~---~~~Lp~~~~~K~ip~~d~~g~~~~p~~pn~~klE~~i~D~~~~~~~~~~~~V~R~~FsPvKn~~~~~~~ds~~ta 426 (484)
+. ...||+|+|+|++||.| |+.||++|||+||||+|++++++++++|+|+||+||||+ +++.++
T Consensus 322 ~~~~~~~~Lp~~vn~K~i~~~d-------~~~~~~~qlE~~~~d~~~~~~~~~~~~V~R~~FsPvKn~------~dl~~~ 388 (505)
T 2oeg_A 322 QEHGGTLPLPVIRNEKTVDSSN-------SASPKVYQLETAMGAAIAMFESASAIVVPRSRFAPVKTC------ADLLAL 388 (505)
T ss_dssp HHTTSSCCCCCEEEEEESSSSC-------TTSCEEEEEECCGGGGGGSCTTCEEEECCGGGCCCCSSH------HHHHHH
T ss_pred hhhcCccCCcceecccccCCCC-------CCCCCeEEEeEHHHHHHHhcCcceEEEeccceeecccCC------CCHHHH
Confidence 65 24689999999999875 678999999999999999999999999999999999997 599999
Q ss_pred HHHHHHHHH--HHHHHcCcEEEcCCCCCeeEEEccc
Q psy10030 427 CQAVHALHA--RWIETAGGVVVADETGNTVCEIAPR 460 (484)
Q Consensus 427 ~~~l~~~~~--~~l~~~g~~~~~~~~~~~~ieisp~ 460 (484)
|++||.+++ +|++ +|+++. . ...||++|.
T Consensus 389 ~sdly~~~~~~~~~~-~~~~~~---~-~p~i~l~p~ 419 (505)
T 2oeg_A 389 RSDAYVVTDDFRLVL-DDRCHG---H-PPVVDLDSA 419 (505)
T ss_dssp HSTTEEECTTCCEEE-CGGGTT---C-CCEEEECHH
T ss_pred HHHHHhhcCCceEEE-cccccC---c-CCeEEEChh
Confidence 999999998 7876 676541 1 235999998
No 8
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=100.00 E-value=1.1e-73 Score=605.74 Aligned_cols=375 Identities=20% Similarity=0.284 Sum_probs=319.9
Q ss_pred ccccHHHHhhhhhhcc-----ccccccccccCCCCcccCCCCCChhhHHHHHHhchhcccCCCEEEEEEcCCCCcccccc
Q psy10030 52 ESIKIQVYIGHGYQEL-----SGVQLSEVQVFPPNCLSGVNTVDASTLGKYRELGLKLISRGDVAVIVLAGGQGTRLGAD 126 (484)
Q Consensus 52 ~~i~~~~f~~~~~~~L-----~ai~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavviLaGG~GTRLG~~ 126 (484)
.+++++.| .+.++.. ..++|++++|+|+..+.++.+++.. .++++.|++++ +|+++|+||||+|||||++
T Consensus 22 ~~~~~~~f-~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~--~~~~~~g~~~l--~k~~vviLAGGlGTRLg~~ 96 (469)
T 2icy_A 22 SESEKSGF-ISLVSRYLSGEAQHIEWSKIQTPTDEIVVPYEKMTPV--SQDVAETKNLL--DKLVVLKLNGGLGTTMGCT 96 (469)
T ss_dssp CHHHHHHH-HHHHHHHC------CCGGGCBCCCTTTEEEGGGSCCC--CSCHHHHHHHH--TTEEEEEEECCBSGGGTCC
T ss_pred chhhHHHH-HHHHHHHHhccCCCCcccccccCCcccccChhhcccc--hhhHHHHHHhh--ccceEEEEcCCccccCCCC
Confidence 56677665 3333221 1368899999998888887665431 24567799987 7999999999999999999
Q ss_pred CCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcCCCCCCCCcEEEEEcCCcc
Q psy10030 127 YPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNGYFGLDPAHVIFFKQRSMP 206 (484)
Q Consensus 127 ~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~~fgl~~~~v~~f~Q~~~P 206 (484)
.||+|+|| ++++||||++++++++++ ++|| +.|||+||||++||+.|++||++|++||+ +|++|+|+++|
T Consensus 97 ~PK~llpv--~~gkp~Le~~i~~l~~~~----~~~G-~~ip~vimts~~t~e~t~~~f~~~~~fG~---~I~~f~Q~~~P 166 (469)
T 2icy_A 97 GPKSVIEV--RDGLTFLDLIVIQIENLN----NKYG-CKVPLVLMNSFNTHDDTHKIVEKYTNSNV---DIHTFNQSKYP 166 (469)
T ss_dssp SBGGGSEE--ETTEEHHHHHHHHHHHHH----HHHS-CCCCEEEEECTTTHHHHHHHHGGGTTSSS---CEEEEECCCEE
T ss_pred CCcccccc--CCCCCHHHHHHHHHHHHH----HhcC-CCccEEEEeCCCCHHHHHHHHHhcccCCc---eEEEEEeccee
Confidence 99999999 579999999999999987 5678 88999999999999999999999999997 59999999999
Q ss_pred ccccCCcccccCC---CcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCHHHHHHHHHcCCceEE
Q psy10030 207 CFSLSGEILLETR---DRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDPTFLGYCVEQGAHCGV 283 (484)
Q Consensus 207 ~~~~~g~~~l~~~---~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~ 283 (484)
|++.+|+++++.+ +.++|+|+||||+|++|.++|++++|.++|++|++|+|+||+ ++.+||.|+|||.++++++++
T Consensus 167 ~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL-~~~~d~~ll~~~~~~~a~~t~ 245 (469)
T 2icy_A 167 RVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNL-GAIVDLTILKHLIQNKNEYCM 245 (469)
T ss_dssp CEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBT-TCCCCHHHHHHHHHHTCSEEE
T ss_pred eEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcC-CcccCHHHHHHHHHcCCCeeE
Confidence 9999999999766 789999999999999999999999999999999999999996 788999999999999999999
Q ss_pred EEEEccCCCcccceEEEECCeEEEEEeccCCcccccccccCCCcccccccceeeeeecHHHHHHHhhc-cccchhhhhcc
Q psy10030 284 KVVEKITPGESLGVLCNVDGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLECLQRMVKE-DAALKFHMARK 362 (484)
Q Consensus 284 ~vv~k~~~~e~~G~l~~~~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~l~~~~~~-~~~Lp~~~~~K 362 (484)
+|++|+.|++++|++|..+|+.+++||+|+++++..++++. ..|+++|||+|||++++|+++.+. ...||+|+|+|
T Consensus 246 ~v~~k~~~~~~~Gvl~~~dg~~~vvE~~e~p~~~~~e~k~~---~~~~~~N~g~y~~~~~~L~~i~~~~~~~lp~~v~~K 322 (469)
T 2icy_A 246 EVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSI---EKFKIFNTNNLWVNLKAIKKLVEADALKMEIIPNPK 322 (469)
T ss_dssp EEEECCTTCCSSCEEEEETTEEEEECGGGSCGGGHHHHHSS---SSCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEE
T ss_pred EEEEeccCCCceeEEEEECCEEEEEEEeccChhhhhhhccc---cccceeeEEEEEEcHHHHHHHHhcccCCchhhccce
Confidence 99999999999999999999999999999998844343443 578889999999999999999876 57899999999
Q ss_pred CCCccCCCCCeecCCCCccchhhhhhhcccccCCceEEEEEeccccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q psy10030 363 KIPCLDEQGISQRPNKPNGIKLEKFLFDAFPLCENLVAWEVTRDEFSPLKNSPLDSASDNPVTCCQAVHALHARWIETAG 442 (484)
Q Consensus 363 ~ip~~d~~g~~~~p~~pn~~klE~~i~D~~~~~~~~~~~~V~R~~FsPvKn~~~~~~~ds~~ta~~~l~~~~~~~l~~~g 442 (484)
++ | .++++|||+||||+|++++++.+++|+|+||+||||+ +++.++++++|. ..+|
T Consensus 323 ~i---d---------~~~~~klE~~~~D~~~~~~~~~~~~V~R~~F~PvKn~------~dll~~~s~l~~------~~~g 378 (469)
T 2icy_A 323 EV---D---------GVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKAS------SDLLLVQSDLYT------LVDG 378 (469)
T ss_dssp EE---T---------TEEEECCBCCGGGGGGGSTTCEEEECCGGGCCBCCSH------HHHHHHHSTTEE------EETT
T ss_pred ec---C---------CCceEeehHhhHHHHHhcCCeEEEEechhHcCcCCCH------HHHHHHHHHHHH------HhcC
Confidence 77 3 2568999999999999999999999999999999998 366666666655 4445
Q ss_pred cEEEcCCCCCeeEEEccceeeecCCccccccC
Q psy10030 443 GVVVADETGNTVCEIAPRVSYEGEGLEERVKG 474 (484)
Q Consensus 443 ~~~~~~~~~~~~ieisp~vsy~gE~l~~~~~~ 474 (484)
..+ .++. -.+||+|+|||++| ++ .+..
T Consensus 379 ~~~-~~~~--~~~~~~P~v~l~~~-~~-~v~~ 405 (469)
T 2icy_A 379 FVT-RNKA--RTNPSNPSIELGPE-FK-KVAT 405 (469)
T ss_dssp EEE-ECTT--CCSSSCCEEEECGG-GC-SHHH
T ss_pred cEE-ecCc--ccCCCCCeEEcChh-hh-hHHH
Confidence 443 2211 14899999999998 76 4443
No 9
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-72 Score=599.49 Aligned_cols=366 Identities=20% Similarity=0.300 Sum_probs=312.2
Q ss_pred cccccccccCCCCcccCCCCCChhhHHHHHHhchhcccCCCEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHH
Q psy10030 69 GVQLSEVQVFPPNCLSGVNTVDASTLGKYRELGLKLISRGDVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAE 148 (484)
Q Consensus 69 ai~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~ 148 (484)
.++|++++|+|+..+.++.+++ .++ .|+ ++++|++||+||||+|||||++.||+|+|| ++|+||||++++
T Consensus 60 ~~~~~~i~p~~~~~~~~~~~~~-----~~~-~~~--~~~~k~avViLAGG~GTRmgs~~PK~l~~V--~~gk~~Le~~i~ 129 (488)
T 2i5k_A 60 TLEWDKIKSPNPDEVVKYEIIS-----QQP-ENV--SNLSKLAVLKLNGGLGTSMGCVGPKSVIEV--REGNTFLDLSVR 129 (488)
T ss_dssp SCCGGGEECCCTTTEEEHHHHH-----SSC-CCS--TTGGGEEEEEECCCBSGGGTCCSBSTTSCC--BTTBCHHHHHHH
T ss_pred CCcccccccCChhcccChhhcc-----cch-hhh--hhcCCceEEEEcCCCcccCCCCCCcccccc--CCCCcHHHHHHH
Confidence 4788999999887777654321 111 244 446799999999999999999999999999 669999999999
Q ss_pred HHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcCCCCCCCCcEEEEEcCCccccccCCcccccCCC---cceec
Q psy10030 149 KIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRD---RVARS 225 (484)
Q Consensus 149 ~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~---~i~~~ 225 (484)
++++++ ..+| +.|||+||||++|++.|++||+++++||+ +|++|.|+++||++.+|+++++.+. .++|+
T Consensus 130 ~i~~l~----~~~G-~~Ip~vImts~~t~e~t~~~~~~~~~fg~---~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~ 201 (488)
T 2i5k_A 130 QIEYLN----RQYD-SDVPLLLMNSFNTDKDTEHLIKKYSANRI---RIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWY 201 (488)
T ss_dssp HHHHHH----HHHT-CCCEEEEECCTTTHHHHHHHHGGGCSSSC---EEEEECCCCEECEETTTCCBSCSSSSSCTTSEE
T ss_pred HHHHhH----HhcC-CCccEEEEECCCCHHHHHHHHHhccccCc---eEEEEEeCccceEccccceeeccCCCCCceeee
Confidence 999886 5567 88999999999999999999999999996 5999999999999999999998664 68999
Q ss_pred cCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCHHHHHHHHHcCCceEEEEEEccCCCcccceEEEECCeE
Q psy10030 226 PDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDPTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNVDGKH 305 (484)
Q Consensus 226 P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~~g~~ 305 (484)
|+||||+|.+|..+|++++|.++|++|++|+|+|| |++..||.+||+|..++++++++++++++|++++|+||+.+|+.
T Consensus 202 P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDn-L~~~~d~~~L~~~~~~~a~~t~~v~~~~~p~~~yG~Iv~~dG~~ 280 (488)
T 2i5k_A 202 PPGHGDLFESLHVSGELDALIAQGREILFVSNGDN-LGATVDLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQV 280 (488)
T ss_dssp CCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTB-SSCCCCHHHHHHHHHSCCSEEEEEEECCGGGSSSCEEEEETTEE
T ss_pred cCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCc-CCCcccHHHHHHHHhcCCcEEEEEEEecCCCCceeEEEEECCcE
Confidence 99999999999999999999999999999999999 78899999999999999999999999999999999999999999
Q ss_pred EEEEeccCCcccccccccCCCcccccccceeeeeecHHHHHHHhhc-cccchhhhhccCCCccCCCCCeecCCCCccchh
Q psy10030 306 KIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLECLQRMVKE-DAALKFHMARKKIPCLDEQGISQRPNKPNGIKL 384 (484)
Q Consensus 306 ~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~l~~~~~~-~~~Lp~~~~~K~ip~~d~~g~~~~p~~pn~~kl 384 (484)
++|||+|+++++..++. +...|+.+|||+|||++++|+++++. ...||+|+|+|++|| |++ .++++||
T Consensus 281 ~iVE~~e~~~e~~~~~~---~~~~~~~~Ntgi~~f~~~~L~~~l~~~~~~lp~~v~~K~i~~-~~~-------~~~~~ql 349 (488)
T 2i5k_A 281 RLLEVAQVPKEHIDEFK---NIRKFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITR-DGH-------EINVLQL 349 (488)
T ss_dssp EEECGGGSCTTSHHHHT---CTTTCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEECCCC-------------CEECC
T ss_pred EEEEeccCCHHHHhhcc---cccccCEEEEEEEEEeHHHHHHHHhhccCCCcceecCccccC-CCC-------CCceEEe
Confidence 99999999998443332 34678899999999999999999876 678999999999998 643 3567999
Q ss_pred hhhhhcccccCCceEEEEEeccccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHcCcEEEcCCCCCeeEEEccceeee
Q psy10030 385 EKFLFDAFPLCENLVAWEVTRDEFSPLKNSPLDSASDNPVTCCQAVHALHARWIETAGGVVVADETGNTVCEIAPRVSYE 464 (484)
Q Consensus 385 E~~i~D~~~~~~~~~~~~V~R~~FsPvKn~~~~~~~ds~~ta~~~l~~~~~~~l~~~g~~~~~~~~~~~~ieisp~vsy~ 464 (484)
|+||||+|++++++.+++|+|+||+||||++ ++.++++++|. ..+|..+. +.. .|||+|+|||+
T Consensus 350 E~~~~d~~~~~~~~~~~~V~R~~F~PvKn~~------~ll~~~~~~~~------~~~g~~~~-~~~---~~e~~P~v~~~ 413 (488)
T 2i5k_A 350 ETACGAAIRHFDGAHGVVVPRSRFLPVKTCS------DLLLVKSDLFR------LEHGSLKL-DPS---RFGPNPLIKLG 413 (488)
T ss_dssp BCCGGGGGGGSSSCEEEEECGGGCCBCCSHH------HHHHHTSTTEE------EETTEEEE-CTT---CCSSCCEEEEC
T ss_pred eehhhhHHhhccCceEEEecccccccccCCc------cHHHHHHHHHH------HhcCcEee-cCC---cCCCCCeEEEC
Confidence 9999999999999999999999999999983 56666665554 44676652 321 28999999999
Q ss_pred cCCccccccCcc----cCC-CcccC
Q psy10030 465 GEGLEERVKGKV----LQT-PLLLE 484 (484)
Q Consensus 465 gE~l~~~~~~~~----~~~-p~~~~ 484 (484)
|+ +. ++++ |.+ |.+++
T Consensus 414 ~~-~~---~~~~~~~rf~~~p~i~~ 434 (488)
T 2i5k_A 414 SH-FK---KVSGFNARIPHIPKIVE 434 (488)
T ss_dssp GG-GS---SHHHHHHHCSSCCBCTT
T ss_pred Cc-cc---chhhHHhhcCCCccccc
Confidence 95 33 4554 766 77764
No 10
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.66 E-value=8.8e-16 Score=164.17 Aligned_cols=253 Identities=19% Similarity=0.186 Sum_probs=173.3
Q ss_pred CCEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHH-
Q psy10030 108 GDVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFER- 186 (484)
Q Consensus 108 gkvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~- 186 (484)
+.++|||||||+||||+...||.|+|| .|||++++.++.+.+ .| +--+++...+..+.++++|++
T Consensus 11 ~~~~vvILAaG~GtRm~~~~pK~l~pv---~gkp~i~~~l~~~~~--------~g---~~~i~vv~~~~~~~i~~~~~~~ 76 (501)
T 3st8_A 11 GDTAVLVLAAGPGTRMRSDTPKVLHTL---AGRSMLSHVLHAIAK--------LA---PQRLIVVLGHDHQRIAPLVGEL 76 (501)
T ss_dssp -CEEEEEEECSCCGGGCCSSCGGGCEE---TTEEHHHHHHHHHHH--------HC---CSEEEEEECTTHHHHHHHHHHH
T ss_pred CCceEEEECCcCcccCCCCCCHHHeEE---CChhHHHHHHHHHHh--------CC---CCEEEEEeCCCHHHHHHHHHHH
Confidence 579999999999999999999999999 999999999998864 34 555555567889999999986
Q ss_pred cCCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccC
Q psy10030 187 NGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVG 266 (484)
Q Consensus 187 ~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~ 266 (484)
.+.+|.+ |.+..|.. |.|+|++....... +.+.-...++|.++|.+|....
T Consensus 77 ~~~~~~~---i~~~~q~~---------------------~lGTa~Av~~a~~~-----l~~~~~~~~lvl~gd~~l~~~~ 127 (501)
T 3st8_A 77 ADTLGRT---IDVALQDR---------------------PLGTGHAVLCGLSA-----LPDDYAGNVVVTSGDTPLLDAD 127 (501)
T ss_dssp HHHHTSC---CEEEECSS---------------------CCCHHHHHHHHHTT-----SCTTCCSEEEEEETTCTTCCHH
T ss_pred HHhcCCc---EEEEEcCC---------------------CCCcHHHHHHHHHH-----hccccccceeeecCcceeecHH
Confidence 3345643 66666654 78999987754322 2222356889999999874322
Q ss_pred C-HHHHHHHHHcCCceEEEEEEccCCCcccceEEEE-CCe-EEEEEeccCCcccccccccCCCcccccccceeeeeecHH
Q psy10030 267 D-PTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNV-DGK-HKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLE 343 (484)
Q Consensus 267 D-p~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~-~g~-~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~ 343 (484)
+ -.++.+|...++++++.+++..+|. .+|++... +|+ ..++|..+.+++ . ..-+..|+..++|+-+
T Consensus 128 ~~~~l~~~h~~~~~~~ti~~~~~~dp~-~yG~i~~~~~g~v~~ivEk~~~~~~-~---------~~i~~in~Giy~f~~~ 196 (501)
T 3st8_A 128 TLADLIATHRAVSAAVTVLTTTLDDPF-GYGRILRTQDHEVMAIVEQTDATPS-Q---------REIREVNAGVYAFDIA 196 (501)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEECSCCT-TSCEEEECTTCCEEEEECGGGCCHH-H---------HHCCEEEEEEEEEEHH
T ss_pred HHHHHHHHHhhccccceEeeeccCCch-hccccccccceeEEeeccccCCChh-h---------ccceeeeceeeeecch
Confidence 1 1356788889999999999888775 67888764 565 468888777665 2 2334678999999999
Q ss_pred HHHHHhhccccchhhhhccCCCccCCCCCeecCCCCccchhhhhhhcccccC----CceEEEEEecc-ccccccCCCCCC
Q psy10030 344 CLQRMVKEDAALKFHMARKKIPCLDEQGISQRPNKPNGIKLEKFLFDAFPLC----ENLVAWEVTRD-EFSPLKNSPLDS 418 (484)
Q Consensus 344 ~l~~~~~~~~~Lp~~~~~K~ip~~d~~g~~~~p~~pn~~klE~~i~D~~~~~----~~~~~~~V~R~-~FsPvKn~~~~~ 418 (484)
.|+++... +... -.+-|.++.|++..+ ..+..+..+.+ +...+.+.
T Consensus 197 ~l~~~l~~---l~~~----------------------n~~~e~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~~---- 247 (501)
T 3st8_A 197 ALRSALSR---LSSN----------------------NAQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNR---- 247 (501)
T ss_dssp HHHHHHTT---CCCC----------------------STTCSCCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSSH----
T ss_pred hHHHhhhh---hccc----------------------ccccccchhhHHHHHHhcCceEEEEeccchhhhcccccH----
Confidence 99887632 2111 124555666665443 23444444444 33333222
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHcCcEE
Q psy10030 419 ASDNPVTCCQAVHALHARWIETAGGVV 445 (484)
Q Consensus 419 ~~ds~~ta~~~l~~~~~~~l~~~g~~~ 445 (484)
.....++..+..+..+.++..|+.+
T Consensus 248 --~~l~~~~~~~~~r~~~~~~~~gv~~ 272 (501)
T 3st8_A 248 --VQLAELASELNRRVVAAHQLAGVTV 272 (501)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred --HHHHHHHHHhhhhhhhhhcccCcee
Confidence 2445555666666666677789887
No 11
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=99.25 E-value=1e-10 Score=114.86 Aligned_cols=181 Identities=17% Similarity=0.176 Sum_probs=123.4
Q ss_pred CCCEEEEEEcCCCCccccc---cCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCC-chHHHH
Q psy10030 107 RGDVAVIVLAGGQGTRLGA---DYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELT-DRPTRE 182 (484)
Q Consensus 107 ~gkvavviLaGG~GTRLG~---~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t-~e~t~~ 182 (484)
..++.+||||||.||||+. +.||.++|+ .|+|++++.++.+.. .| +.-+++...+. .+.+.+
T Consensus 22 ~~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i---~g~pli~~~l~~l~~--------~g---~~~iivv~~~~~~~~~~~ 87 (269)
T 4ecm_A 22 SNAMKGIILAGGTGSRLYPITKVTNKHLLPV---GRYPMIYHAVYKLKQ--------CD---ITDIMIITGKEHMGDVVS 87 (269)
T ss_dssp --CEEEEEECCSCCGGGTTTTSSSCGGGSEE---TTEEHHHHHHHHHHH--------TT---CCEEEEEECTTTHHHHHH
T ss_pred ccCcEEEEECCCCccccccccCCCCceecEE---CCEEHHHHHHHHHHH--------CC---CCEEEEECChhhHHHHHH
Confidence 3468999999999999987 889999999 799999999998864 23 55555555543 477888
Q ss_pred HHHHcCCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCc
Q psy10030 183 YFERNGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNIL 262 (484)
Q Consensus 183 ~l~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l 262 (484)
++++...+|++ +.+..| ..+.|+|+.+.... +.+ +.++++|+++|+++
T Consensus 88 ~~~~~~~~~~~---i~~~~~---------------------~~~~G~~~al~~a~-----~~~---~~~~~lv~~~D~~~ 135 (269)
T 4ecm_A 88 FLGSGQEFGVS---FTYRVQ---------------------DKAGGIAQALGLCE-----DFV---GNDRMVVILGDNIF 135 (269)
T ss_dssp HHTTSGGGTCE---EEEEEC---------------------SSCCCHHHHHHTTH-----HHH---TTSEEEEEETTEEE
T ss_pred HHhhccccCce---EEEeeC---------------------CccCcHHHHHHHHH-----Hhc---CCCcEEEEeCCccC
Confidence 88765456643 332222 22567777665432 222 25899999999986
Q ss_pred cccCCHHHHHHHHHcCCceEEEEEEccCCCcccceEEEECCeEEEEEeccCCcccccccccCCCcccccccceeeeeecH
Q psy10030 263 VKVGDPTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNVDGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSL 342 (484)
Q Consensus 263 ~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l 342 (484)
. ..--.++..+.++++++++-+.+..+| .+.|++...+|+ ++++.+-+.. ......|++.++|+-
T Consensus 136 ~-~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~v~~d~g~--v~~~~ekp~~-----------~~~~~~~~Giy~~~~ 200 (269)
T 4ecm_A 136 S-DDIRPYVEEFTNQKEGAKVLLQSVDDP-ERFGVANIQNRK--IIEIEEKPKE-----------PKSSYAVTGIYLYDS 200 (269)
T ss_dssp S-SCSHHHHHHHHTSSSSEEEEEEECSCG-GGSEEEEEETTE--EEEEEESCSS-----------CSCSEEEEEEEEECT
T ss_pred c-cCHHHHHHHHHhcCCCeEEEEEECCCC-CCceEEEEcCCE--EEEEEECCCC-----------CCCcEEEEEEEEECH
Confidence 4 444557788888889988888877654 567888877765 3344333321 012367889999998
Q ss_pred HHHHHH
Q psy10030 343 ECLQRM 348 (484)
Q Consensus 343 ~~l~~~ 348 (484)
++++.+
T Consensus 201 ~~l~~l 206 (269)
T 4ecm_A 201 KVFSYI 206 (269)
T ss_dssp THHHHH
T ss_pred HHHHhh
Confidence 776544
No 12
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.19 E-value=1.2e-10 Score=113.52 Aligned_cols=188 Identities=16% Similarity=0.089 Sum_probs=119.4
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcC
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNG 188 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~ 188 (484)
|+.+||||||.||||+ ||.+.|| .|+|++++.++++.. .| +.-+++..+ ++.+.+++++
T Consensus 2 ~~~aiIlA~G~stRlp---~K~L~~i---~GkPli~~~l~~l~~--------~~---~~~ivVv~~--~~~i~~~~~~-- 60 (252)
T 3oam_A 2 SFTVVIPARYQSTRLP---GKPLADI---GGKPMIQWVYEQAMQ--------AG---ADRVIIATD--DERVEQAVQA-- 60 (252)
T ss_dssp CEEEEEECCCCCSSST---TGGGCEE---TTEEHHHHHHHHHHH--------TT---CSEEEEEES--CHHHHHHHHH--
T ss_pred ceEEEEecCcCCCCCC---CcceeeE---CCEEHHHHHHHHHHh--------CC---CCeEEEECC--HHHHHHHHHH--
Confidence 5789999999999995 7999999 899999999998864 23 333344433 6889999986
Q ss_pred CCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCH
Q psy10030 189 YFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDP 268 (484)
Q Consensus 189 ~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp 268 (484)
||.+ +.+..| ..|.|+|+++.++.. +...+.++++++++|+++....+-
T Consensus 61 -~g~~---v~~~~~---------------------~~~~Gt~~~~~~~~~------l~~~~~d~vlv~~gD~Pli~~~~i 109 (252)
T 3oam_A 61 -FGGV---VCMTSP---------------------NHQSGTERLAEVVAK------MAIPADHIVVNVQGDEPLIPPAII 109 (252)
T ss_dssp -TTCE---EEECCT---------------------TCCSHHHHHHHHHHH------TTCCTTSEEEECCTTCTTCCHHHH
T ss_pred -cCCE---EEEcCC---------------------CCCCcHHHHHHHHHh------cCcCCCCEEEEEeCCeeecCHHHH
Confidence 5532 321111 236889987765532 211256899999999987422221
Q ss_pred -HHHHHHHHcCCceEEEEEEccCCCcc----cceEEEE-CCeEEEEEeccCCcccccccccCC-C-cccccccceeeeee
Q psy10030 269 -TFLGYCVEQGAHCGVKVVEKITPGES----LGVLCNV-DGKHKIVEYSELGNCSVFETQDQT-G-RLKFNLGSICNHYF 340 (484)
Q Consensus 269 -~~lg~~~~~~~~~~~~vv~k~~~~e~----~G~l~~~-~g~~~vvEyse~~~e~~~~~~~~~-g-~~~f~~~Ni~~~~~ 340 (484)
.++..+.++++++++-+++..+|.+. +|.++.. +|+ ++.+++-+-.+.++..... . ...-+..|++.+.|
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~d~~g~--v~~fsr~~i~~~~~~~~~~~~~~~~~~~~n~GiY~~ 187 (252)
T 3oam_A 110 RQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGY--ALYFSRATIPWDRDNFAKADKAIVQPLLRHIGIYAY 187 (252)
T ss_dssp HHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEECTTSB--EEEEESSCSSCCHHHHHSSSCCCCSCEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEECCCCe--EEEEeCCCCCCCCCccccccccccccceEEEEEEEc
Confidence 24555666788898888887655432 2666553 564 4556653211011100000 0 01124679999999
Q ss_pred cHHHHHHHhh
Q psy10030 341 SLECLQRMVK 350 (484)
Q Consensus 341 ~l~~l~~~~~ 350 (484)
+-++|++..+
T Consensus 188 ~~~~l~~~~~ 197 (252)
T 3oam_A 188 RAGFINTYLD 197 (252)
T ss_dssp ETTHHHHHHH
T ss_pred CHHHHHHHHc
Confidence 9999988764
No 13
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=99.12 E-value=4.7e-10 Score=110.45 Aligned_cols=197 Identities=17% Similarity=0.143 Sum_probs=115.5
Q ss_pred EEEEEEcCCCCccccc---cCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHH
Q psy10030 110 VAVIVLAGGQGTRLGA---DYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFER 186 (484)
Q Consensus 110 vavviLaGG~GTRLG~---~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~ 186 (484)
+.+||||||.||||+. ..||.++|| .|+|++++.++.+.. .| +.-+++...+..+.+.++|.+
T Consensus 3 ~~avIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~--------~g---i~~i~vv~~~~~~~i~~~~~~ 68 (281)
T 3juk_A 3 KKCLFPAAGYGTRFLPITKTIPKEMLPI---VDKPLIQYAVEEAME--------AG---CEVMAIVTGRNKRSLEDYFDT 68 (281)
T ss_dssp CEEEEECCSCCGGGTTGGGTSCGGGCBS---SSSBHHHHHHHHHHH--------HT---CCEEEEEECTTHHHHHHHTSC
T ss_pred eEEEEECCcCCcccCccccCCCcccceE---CCEEHHHHHHHHHHh--------CC---CCEEEEEecCCHHHHHHHHhc
Confidence 5689999999999987 899999999 799999999998864 24 556666667778899988865
Q ss_pred cCCCCCCCCcEEEEEcCCc---cccc---cCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCC
Q psy10030 187 NGYFGLDPAHVIFFKQRSM---PCFS---LSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDN 260 (484)
Q Consensus 187 ~~~fgl~~~~v~~f~Q~~~---P~~~---~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN 260 (484)
...+ +. .+ -..+.. ..+. ...++. ......|.|+|+.+.... +.+ +-++++|.++|+
T Consensus 69 ~~~l--~~-~l--~~~~~~~~~~~~~~~~~~~~i~----~~~~~~~~Gt~~al~~a~-----~~l---~~~~~lv~~~D~ 131 (281)
T 3juk_A 69 SYEI--EH-QI--QGTNKENALKSIRNIIEKCCFS----YVRQKQMKGLGHAILTGE-----ALI---GNEPFAVILADD 131 (281)
T ss_dssp CC-------------CCHHHHHHHHHHHHHHCEEE----EEECSSCCCHHHHHHHTH-----HHH---CSSCEEEECTTE
T ss_pred chhh--hh-hh--hcccchhhhhhhhccccCccEE----EEecCCCCCcHHHHHHHH-----HHc---CCCCEEEEeCCe
Confidence 4221 10 00 000000 0000 000000 111223678888766432 222 347899999999
Q ss_pred CccccC-----CHHHHHHHHHcCCceEEEEEEcc-CCCcccceEEEE---CCeEEEEEeccCCcccccccccCCCccccc
Q psy10030 261 ILVKVG-----DPTFLGYCVEQGAHCGVKVVEKI-TPGESLGVLCNV---DGKHKIVEYSELGNCSVFETQDQTGRLKFN 331 (484)
Q Consensus 261 ~l~~~~-----Dp~~lg~~~~~~~~~~~~vv~k~-~~~e~~G~l~~~---~g~~~vvEyse~~~e~~~~~~~~~g~~~f~ 331 (484)
++ ... --.++.++.+.++ .++.+.... .+..+.|++... +|-.+|.++.|-+.... ..-+
T Consensus 132 ~~-~~~~~~~~l~~l~~~~~~~~~-~~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~~---------~~~~ 200 (281)
T 3juk_A 132 LC-ISHDHPSVLKQMTSLYQKYQC-SIVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQED---------APSN 200 (281)
T ss_dssp EE-ECTTSCCHHHHHHHHHHHHCS-CEEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTT---------CSCS
T ss_pred ec-cCccchHHHHHHHHHHHHcCC-CEEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCCC---------CCcc
Confidence 54 332 2336667766666 333333221 234577888765 66445555555443200 0123
Q ss_pred ccceeeeeecHHHHHHH
Q psy10030 332 LGSICNHYFSLECLQRM 348 (484)
Q Consensus 332 ~~Ni~~~~~~l~~l~~~ 348 (484)
..|++.++|+-+.++.+
T Consensus 201 ~~~~GiYi~~~~~l~~l 217 (281)
T 3juk_A 201 LAVIGRYILTPDIFEIL 217 (281)
T ss_dssp EEEEEEEEECTTHHHHH
T ss_pred eeEEEEEEECHHHHHHH
Confidence 56889999998776544
No 14
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.07 E-value=1.1e-09 Score=109.07 Aligned_cols=181 Identities=20% Similarity=0.232 Sum_probs=117.5
Q ss_pred CEEEEEEcCCCCcccc---ccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccE-EEEeCCCCchHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLG---ADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPW-FIMTSELTDRPTREYF 184 (484)
Q Consensus 109 kvavviLaGG~GTRLG---~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl-~iMtS~~t~e~t~~~l 184 (484)
++.+||||||.||||+ .+.||.++|| .|+|++++.++.+.. .| +.- +|.|+.+..+.+.+++
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi---~gkpli~~~l~~l~~--------~g---i~~I~vv~~~~~~~~i~~~l 67 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPV---YDKPMIYYPLSTLML--------AG---IREILIISTPQDTPRFQQLL 67 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEE---TTEETTHHHHHHHHH--------TT---CCEEEEEECTTTHHHHHHHH
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeE---CCEeHHHHHHHHHHH--------CC---CCEEEEEeccccHHHHHHHH
Confidence 4678999999999998 3689999999 899999999888853 23 444 4456677778888888
Q ss_pred HHcCCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccc
Q psy10030 185 ERNGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVK 264 (484)
Q Consensus 185 ~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~ 264 (484)
.+...+|++ +.+..|+ .|.|+++.+....+ .+ +-+.++++++||++..
T Consensus 68 ~~g~~~g~~---i~~~~~~---------------------~~~G~~~al~~a~~-----~i---~~~~~~lv~gD~~~~~ 115 (293)
T 1fxo_A 68 GDGSNWGLD---LQYAVQP---------------------SPDGLAQAFLIGES-----FI---GNDLSALVLGDNLYYG 115 (293)
T ss_dssp TTSGGGTCE---EEEEECS---------------------SCCCGGGHHHHTHH-----HH---TTSEEEEEETTEEEEC
T ss_pred hcccccCce---EEEeeCC---------------------CCCCHHHHHHHHHH-----Hh---CCCCEEEEECChhccC
Confidence 765445643 3322222 37788887764322 22 2356677779999754
Q ss_pred cCCHHHHHHHHHcCCceEEEEEEccCCCcccceEEEE-CCeEEEEEeccCCcccccccccCCCcccccccceeeeeecHH
Q psy10030 265 VGDPTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNV-DGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLE 343 (484)
Q Consensus 265 ~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~-~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~ 343 (484)
..-..++..+.+++.+.++-+++..+| ++.|++... +|+. +.+.+-|.. - .-++.|++.++|+-+
T Consensus 116 ~~l~~~l~~~~~~~~~~~v~~~~v~dp-~~~g~v~~d~~g~v--~~~~ekp~~-~----------~s~~~~~Giy~~~~~ 181 (293)
T 1fxo_A 116 HDFHELLGSASQRQTGASVFAYHVLDP-ERYGVVEFDQGGKA--ISLEEKPLE-P----------KSNYAVTGLYFYDQQ 181 (293)
T ss_dssp TTHHHHHHHHHTCCSSEEEEEEECSCG-GGSEEEEECTTSCE--EEEEESCSS-C----------SSSEEEEEEEEECTT
T ss_pred ccHHHHHHHHHhcCCCcEEEEEECCCc-ccCcEEEECCCCcE--EEEEECCCC-C----------CCCeEEEEEEEEcHH
Confidence 222335666655666777767766655 578887654 4543 333332221 0 113678888999987
Q ss_pred HHHHHh
Q psy10030 344 CLQRMV 349 (484)
Q Consensus 344 ~l~~~~ 349 (484)
.++.+.
T Consensus 182 ~l~~~~ 187 (293)
T 1fxo_A 182 VVDIAR 187 (293)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765543
No 15
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.06 E-value=1.7e-09 Score=108.03 Aligned_cols=179 Identities=20% Similarity=0.208 Sum_probs=116.9
Q ss_pred EEEEEEcCCCCcccc---ccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCcccc-EEEEeCCCCchHHHHHHH
Q psy10030 110 VAVIVLAGGQGTRLG---ADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLP-WFIMTSELTDRPTREYFE 185 (484)
Q Consensus 110 vavviLaGG~GTRLG---~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ip-l~iMtS~~t~e~t~~~l~ 185 (484)
+.+||||||.||||+ .+.||.++|| .|+|++++.++.+.. .| +. ++|.|+.+..+.+.+++.
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi---~gkpli~~~l~~l~~--------~g---i~~I~vv~~~~~~~~i~~~l~ 69 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPITRGVSKQLLPI---YDKPMIYYPLSVLML--------AG---IREILIITTPEDKGYFQRLLG 69 (296)
T ss_dssp CEEEEECCCCCGGGHHHHTTSCGGGSEE---TTEETTHHHHHHHHH--------TT---CCEEEEEECTTTHHHHHHHHT
T ss_pred cEEEEECCCCCCcCCcccCCCCceeeEE---CCeeHHHHHHHHHHh--------CC---CCcEEEEechhHHHHHHHHHh
Confidence 568999999999998 4789999999 899999999888753 23 44 444566677788888887
Q ss_pred HcCCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCcccc
Q psy10030 186 RNGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKV 265 (484)
Q Consensus 186 ~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~ 265 (484)
+...+|++ +.+..|. .|.|+++.+..... .+ +-+.++++++||++...
T Consensus 70 ~g~~~g~~---i~~~~~~---------------------~~~G~~~al~~a~~-----~i---~~~~~~lv~gD~~~~~~ 117 (296)
T 1mc3_A 70 DGSEFGIQ---LEYAEQP---------------------SPDGLAQAFIIGET-----FL---NGEPSCLVLGDNIFFGQ 117 (296)
T ss_dssp TSGGGTCE---EEEEECS---------------------SCCCSTHHHHHTHH-----HH---TTSCEEEEETTEEEECS
T ss_pred cccccCce---EEEeccC---------------------CCCCHHHHHHHHHH-----Hh---CCCCEEEEECCcccccc
Confidence 65445643 3332332 36788877654321 22 22445556699997543
Q ss_pred CCHHHHHHHHHcCCceEEEEEEccCCCcccceEEEE-CCeEEEEEeccCCcccccccccCCCcccccccceeeeeecHHH
Q psy10030 266 GDPTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNV-DGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLEC 344 (484)
Q Consensus 266 ~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~-~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~ 344 (484)
.-..++..+.+.+.+.++-+++..+| +++|++... +| .++.+.+-|.. - .-++.|++.++|+-++
T Consensus 118 ~l~~~l~~~~~~~~~~~v~~~~v~dp-~~yg~v~~d~~g--~v~~~~ekp~~-~----------~s~~~~~Giy~~~~~~ 183 (296)
T 1mc3_A 118 GFSPKLRHVAARTEGATVFGYQVMDP-ERFGVVEFDDNF--RAISLEEKPKQ-P----------KSNWAVTGLYFYDSKV 183 (296)
T ss_dssp SCHHHHHHHTTCCSSEEEEEEECSCC-SSSBBCEEETTE--EEEECCBSCSS-C----------SCSEEEEEEEECCTHH
T ss_pred CHHHHHHHHHHcCCCCEEEEEECCCc-ccCCEEEECCCC--cEEEEEECCCC-C----------CCCEEEEEEEEEcHHH
Confidence 34456666655566677666776666 478887654 33 34555443321 0 1136788899999887
Q ss_pred HHHH
Q psy10030 345 LQRM 348 (484)
Q Consensus 345 l~~~ 348 (484)
++.+
T Consensus 184 l~~~ 187 (296)
T 1mc3_A 184 VEYA 187 (296)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 16
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.04 E-value=2.6e-09 Score=106.82 Aligned_cols=208 Identities=14% Similarity=0.087 Sum_probs=125.3
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCC-chHHHHHHHHc
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELT-DRPTREYFERN 187 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t-~e~t~~~l~~~ 187 (484)
++.+||||||+||||+. ||.++|++ +.|+|++++.++.+.. .| +.-+++...+. .+.+.++|.+.
T Consensus 5 ~~~~vIlAaG~g~R~~~--~K~l~~ig-~~g~pli~~~l~~~~~--------~~---~~~i~vv~~~~~~~~~~~~~~~~ 70 (303)
T 3pnn_A 5 KPTLFVLAAGMGSRYGS--LKQLDGIG-PGGDTIMDYSVYDAIR--------AG---FGRLVFVIRHSFEKEFREKILTK 70 (303)
T ss_dssp CCEEEEECTTCBCTTSS--BCCCCCCS-TTSCCHHHHHHHHHHH--------HT---CCEEEEEECGGGHHHHHHHTHHH
T ss_pred ceEEEEECCCCcccCCC--CceEeEcC-CCCeeHHHHHHHHHHH--------CC---CCeEEEEcCchHHHHHHHHHHHH
Confidence 46889999999999986 89999983 2589999999988754 23 54454445555 58899999875
Q ss_pred CCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccC-
Q psy10030 188 GYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVG- 266 (484)
Q Consensus 188 ~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~- 266 (484)
..++. ++.+..|+..- +.....+... ...|.|+|+.+...... + -+.++|+++|++. ...
T Consensus 71 ~~~~~---~i~~~~~~~~~-~~~~~~~~~~-----~~~~~Gt~~al~~a~~~-----i----~~~~lV~~gD~l~-~~~~ 131 (303)
T 3pnn_A 71 YEGRI---PVELVFQELDR-LPEGFSCPEG-----REKPWGTNHAVLMGRDA-----I----REPFAVINADDFY-GRNG 131 (303)
T ss_dssp HTTTS---CEEEEECCTTC-CCTTCCCCTT-----CCSCCCHHHHHHTTTTT-----C----CSCEEEEESSCBC-CHHH
T ss_pred hccCC---cEEEEeccccc-cccccccccc-----ccccCCcHHHHHHHHHh-----c----CCCEEEEECCeec-CHHH
Confidence 43443 47777776321 1111111111 12478999887765432 1 2567899999964 211
Q ss_pred CHHHHHHHHH---cCCceEEEEEEccCCCccc-----ceEEEE-CCeE-EEEEeccCCccc-ccccccCCCc----cccc
Q psy10030 267 DPTFLGYCVE---QGAHCGVKVVEKITPGESL-----GVLCNV-DGKH-KIVEYSELGNCS-VFETQDQTGR----LKFN 331 (484)
Q Consensus 267 Dp~~lg~~~~---~~~~~~~~vv~k~~~~e~~-----G~l~~~-~g~~-~vvEyse~~~e~-~~~~~~~~g~----~~f~ 331 (484)
--.++.++.+ .++++++-+.+..+|-... |++... +|+. .++|-.+.+.+. .....+.+|. ..-+
T Consensus 132 ~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~G~v~~d~~g~v~~i~Ekp~~~~~~~~~~~~~~~g~~~~~~~~~ 211 (303)
T 3pnn_A 132 FEVLARKLMTLEGKQGEYCMVGYRVGNTLSESGGVSRGVCQVDEKHLLTGVVERTGIERTDGTISFRDETGKICTLAEDA 211 (303)
T ss_dssp HHHHHHHHHTTTTCSSEEEEEEEEGGGSCBTTBCEEEEEEEECTTSBEEEEEEEEEEEEETTEEEEECTTSCEEEECTTC
T ss_pred HHHHHHHHHHhccccCceEEEEEECCCccCccCceeeeeEeeCCCCcEEEEEECCCCccccccccccccccccccCCCCC
Confidence 1226677664 5688888888777662334 455444 5653 355554432110 0001111221 0124
Q ss_pred ccceeeeeecHHHHHHHh
Q psy10030 332 LGSICNHYFSLECLQRMV 349 (484)
Q Consensus 332 ~~Ni~~~~~~l~~l~~~~ 349 (484)
..|++.++|+-++++.+.
T Consensus 212 ~i~~GiY~f~~~~~~~l~ 229 (303)
T 3pnn_A 212 PVSMNMWGFTPDYFDYSE 229 (303)
T ss_dssp EEEEEEEEECTHHHHHHH
T ss_pred EEEEEEEEECHHHHHHHH
Confidence 678899999988776654
No 17
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.03 E-value=3e-09 Score=106.27 Aligned_cols=180 Identities=18% Similarity=0.174 Sum_probs=114.2
Q ss_pred CEEEEEEcCCCCcccc---ccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCcccc-EEEEeCCCCchHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLG---ADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLP-WFIMTSELTDRPTREYF 184 (484)
Q Consensus 109 kvavviLaGG~GTRLG---~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ip-l~iMtS~~t~e~t~~~l 184 (484)
.+.+||||||.||||+ .+.||.++|| .|+|++++.++.+.. .| +. ++|.|+.+..+.+.+++
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi---~gkpli~~~l~~l~~--------~g---i~~Iivv~~~~~~~~i~~~l 68 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPITRAVSKQLLPI---YDKPMIYYPLSVLML--------AG---IRDILIISTPRDLPLYRDLL 68 (295)
T ss_dssp SCEEEEECCCCCSTTTTTTTSSCGGGSEE---TTEETTHHHHHHHHH--------TT---CCEEEEEECTTTHHHHHHHH
T ss_pred ceEEEEECCCCCCccccccCCCCceecEE---CCeeHHHHHHHHHHH--------CC---CCeEEEEeccchHHHHHHHh
Confidence 3678999999999998 4789999999 899999999888853 23 44 34456667778888888
Q ss_pred HHcCCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccc
Q psy10030 185 ERNGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVK 264 (484)
Q Consensus 185 ~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~ 264 (484)
.+...+|++ +.+..|. .|.|+++.+..... .+ +-+.+.++++||++..
T Consensus 69 ~~g~~~g~~---i~~~~~~---------------------~~~G~~~al~~a~~-----~i---~~~~~~lv~gD~~~~~ 116 (295)
T 1lvw_A 69 GDGSQFGVR---FSYRVQE---------------------EPRGIADAFIVGKD-----FI---GDSKVALVLGDNVFYG 116 (295)
T ss_dssp TTSGGGTSE---EEEEECS---------------------SCCCGGGHHHHTHH-----HH---TTSCEEEEETTCCEEC
T ss_pred hhccccCce---EEEeeCC---------------------CCCChHHHHHHHHH-----Hh---CCCcEEEEECCccccC
Confidence 764445643 3322222 26788887664322 22 2234555569999754
Q ss_pred cCCHHHHHHHHHcCCceEEEEEEccCCCcccceEEEE-CCeEEEEEeccCCcccccccccCCCcccccccceeeeeecHH
Q psy10030 265 VGDPTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNV-DGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLE 343 (484)
Q Consensus 265 ~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~-~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~ 343 (484)
..-..++..+.+.+.+.++-+++..+|. +.|++... +|+. +.+.+-|.. - .-++.|++.++|+-+
T Consensus 117 ~~l~~~l~~~~~~~~~~~v~~~~v~dp~-~~g~v~~d~~g~v--~~~~ekp~~-~----------~s~~~~~Giy~f~~~ 182 (295)
T 1lvw_A 117 HRFSEILRRAASLEDGAVIFGYYVRDPR-PFGVVEFDSEGRV--ISIEEKPSR-P----------KSNYVVPGLYFYDNQ 182 (295)
T ss_dssp TTHHHHHHHHHTCCSSEEEEEEECSCCT-TSEEEEECTTSBE--EEEEESCSS-C----------SCSEECCSEEEECTT
T ss_pred cCHHHHHHHHHHcCCCcEEEEEECCCcc-cCCEEEECCCCcE--EEEEECCCC-C----------CCCEEEEEeEEEcHH
Confidence 2223356666555666766677766664 68877644 4543 333332211 0 113567888899987
Q ss_pred HHHHH
Q psy10030 344 CLQRM 348 (484)
Q Consensus 344 ~l~~~ 348 (484)
.++.+
T Consensus 183 ~l~~~ 187 (295)
T 1lvw_A 183 VVEIA 187 (295)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
No 18
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.02 E-value=2.3e-08 Score=104.69 Aligned_cols=177 Identities=19% Similarity=0.213 Sum_probs=113.3
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcC
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNG 188 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~ 188 (484)
++.+|+||||.||||+.+.||.++|+ .|+|++++.++.++.. | +.-+++...+.++.+.+++++.
T Consensus 8 ~~~aiIlA~G~g~Rl~~~~pK~l~~i---~g~pli~~~l~~l~~~--------~---~~~i~vv~~~~~~~i~~~~~~~- 72 (459)
T 4fce_A 8 SMSVVILAAGKGTRMYSDLPKVLHPL---AGKPMVQHVIDAAMKL--------G---AQHVHLVYGHGGELLKKTLADP- 72 (459)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHHHH--------T---CSCEEEEESSCHHHHHHHC----
T ss_pred cceEEEECCCCCccCCCCCCcccCee---CCeeHHHHHHHHHHhC--------C---CCcEEEEeCCCHHHHHHHhccC-
Confidence 68999999999999999899999999 8999999999988642 2 4444444455577888777642
Q ss_pred CCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCH
Q psy10030 189 YFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDP 268 (484)
Q Consensus 189 ~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp 268 (484)
+ +.+..| ..+.|+++.+.+..+. + ...+++++++.|.++. ++
T Consensus 73 --~-----~~~v~~---------------------~~~~g~~~~i~~~~~~-----~--~~~~~~lv~~~D~P~i---~~ 114 (459)
T 4fce_A 73 --S-----LNWVLQ---------------------AEQLGTGHAMQQAAPH-----F--ADDEDILMLYGDVPLI---SV 114 (459)
T ss_dssp ---------CEEEC---------------------SSCCCHHHHHHHHGGG-----S--CTTSEEEEEETTCTTC---CH
T ss_pred --C-----cEEEeC---------------------CCCCCcHHHHHHHHHh-----c--CCCCcEEEEeCCcccC---CH
Confidence 2 222222 1245665544433221 1 1358999999999863 45
Q ss_pred HHHHHHHH--cCCceEEEEEEccCCCcccceEEEECCeEE-EEEeccCCcccccccccCCCcccccccceeeeeecHHHH
Q psy10030 269 TFLGYCVE--QGAHCGVKVVEKITPGESLGVLCNVDGKHK-IVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLECL 345 (484)
Q Consensus 269 ~~lg~~~~--~~~~~~~~vv~k~~~~e~~G~l~~~~g~~~-vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~l 345 (484)
..+..+.+ ...+.++-+++..++ .+.|.+...+|+.. ++|-....++ . ......|++.++|+-+++
T Consensus 115 ~~i~~l~~~~~~~~~~~~~~~~~~~-~~~g~v~~~~g~v~~~~ek~~~~~~-~---------~~~~~~~~Giy~~~~~~l 183 (459)
T 4fce_A 115 DTLQRLLAAKPEGGIGLLTVKLDNP-SGYGRIVRENGDVVGIVEHKDASDA-Q---------REINEINTGILVANGRDL 183 (459)
T ss_dssp HHHHHHHHHCCTTSEEEEEEECSCC-TTSCEEEEETTEEEEEECGGGCCTT-G---------GGCCEEEEEEEEEEHHHH
T ss_pred HHHHHHHHHHhhCCEEEEEEecCCC-CcccEEEeCCCcEEEEEECCCCChH-H---------hhccEEEEEEEEEEHHHH
Confidence 55554443 246677777777665 46788877777532 3333222221 0 112367889999999988
Q ss_pred HHHh
Q psy10030 346 QRMV 349 (484)
Q Consensus 346 ~~~~ 349 (484)
.+++
T Consensus 184 ~~~l 187 (459)
T 4fce_A 184 KRWL 187 (459)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 19
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=98.99 E-value=4.2e-09 Score=101.81 Aligned_cols=189 Identities=17% Similarity=0.207 Sum_probs=109.7
Q ss_pred EEEEEEcCCCCccccc---cCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHH
Q psy10030 110 VAVIVLAGGQGTRLGA---DYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFER 186 (484)
Q Consensus 110 vavviLaGG~GTRLG~---~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~ 186 (484)
+.+||||||.||||+. +.||.++|+ .|+|++++.++++.+ .| +.-+++...+.++.+.+++.+
T Consensus 3 ~~avIlAaG~gtRl~~lt~~~pK~l~~i---~gkpli~~~l~~l~~--------~g---~~~i~vv~~~~~~~i~~~~~~ 68 (259)
T 1tzf_A 3 SKAVILAGGLGTRLSEETIVKPKPMVEI---GGKPILWHIMKMYSV--------HG---IKDFIICCGYKGYVIKEYFAN 68 (259)
T ss_dssp CEEEEEECSCC--------CCCGGGCEE---TTEEHHHHHHHHHHH--------TT---CCEEEEEECTTHHHHHHHHHT
T ss_pred cEEEEECCCCcccCCCccCCCCccccEE---CCEEHHHHHHHHHHH--------CC---CCEEEEEcccCHHHHHHHHhh
Confidence 5689999999999986 679999999 799999999888864 23 544455555667889999976
Q ss_pred cCCCCCCCCcEEEEEcCC-ccccccCCcccccCCCcc----eeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCC
Q psy10030 187 NGYFGLDPAHVIFFKQRS-MPCFSLSGEILLETRDRV----ARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNI 261 (484)
Q Consensus 187 ~~~fgl~~~~v~~f~Q~~-~P~~~~~g~~~l~~~~~i----~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~ 261 (484)
+..++ .++.+..|+. +=.+... ..++.+ ...+.|+|+.+...... + . +.++++|.++|++
T Consensus 69 ~~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~gt~~al~~a~~~-----~-~-~~~~~lv~~~D~~ 133 (259)
T 1tzf_A 69 YFLHM---SDVTFHMAENRMEVHHKR-----VEPWNVTLVDTGDSSMTGGRLKRVAEY-----V-K-DDEAFLFTYGDGV 133 (259)
T ss_dssp HHHHH---SCEEEEGGGTEEEETTCC-----CCCCEEEEEECCSSCCHHHHHHHTGGG-----T-T-TSSCEEEEETTEE
T ss_pred ccccc---ccccccccccceeeeecc-----ccccceeeeecccccCcHHHHHHHHHh-----c-C-CCCcEEEEECCEe
Confidence 42110 1133333321 0000000 011111 12367898877654432 1 1 3478899999996
Q ss_pred ccccCCHHHHHHHHHcCCceEEEEEEccCCCcccceEEEECCeEEEEEeccCCcccccccccCCCcccccccceeeeeec
Q psy10030 262 LVKVGDPTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNVDGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFS 341 (484)
Q Consensus 262 l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~ 341 (484)
. ...-..++.++...++++++..+ . +...+|.+...+|+ ++++.|-+.. . ....|++.++|+
T Consensus 134 ~-~~~~~~~~~~~~~~~~~~t~~~~--~-~~~~~g~v~~~~g~--v~~~~ekp~~-~-----------~~~~~~Giy~~~ 195 (259)
T 1tzf_A 134 A-DLDIKATIDFHKAHGKKATLTAT--F-PPGRFGALDIQAGQ--VRSFQEKPKG-D-----------GAMINGGFFVLN 195 (259)
T ss_dssp E-CCCHHHHHHHHHHHCCSEEEEEE--C-CCCCSEEEEEETTE--EEEEEESCSC-C-----------SCCEECCCEEEC
T ss_pred c-ccCHHHHHHHHHHhCCeEEEEEe--c-CCCCccEEEEcCCE--EEEEEecCCC-C-----------CceEEEEEEEeC
Confidence 4 32223467777777887765433 2 33467877766664 4455443321 0 125677888888
Q ss_pred HHHH
Q psy10030 342 LECL 345 (484)
Q Consensus 342 l~~l 345 (484)
-+++
T Consensus 196 ~~~l 199 (259)
T 1tzf_A 196 PSVI 199 (259)
T ss_dssp GGGG
T ss_pred HHHH
Confidence 7654
No 20
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=98.94 E-value=6.4e-09 Score=101.86 Aligned_cols=185 Identities=18% Similarity=0.131 Sum_probs=111.4
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcC
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNG 188 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~ 188 (484)
++.+||||||.||||+ ||.+.|| .|||++++.+++++. .| +.-++..++ ++.+.+++++
T Consensus 9 ~~~aIIlA~G~stRl~---~K~L~~i---~GkPli~~~l~~l~~--------~~---i~~VvVvt~--~~~i~~~~~~-- 67 (256)
T 3tqd_A 9 EFRVIIPARFDSTRLP---GKALVDI---AGKPMIQHVYESAIK--------SG---AEEVVIATD--DKRIRQVAED-- 67 (256)
T ss_dssp CCEEEEECCCC---CT---TGGGCEE---TTEEHHHHHHHHHHH--------TT---CSEEEEEES--CHHHHHHHHH--
T ss_pred CceEEEEcCCCCCCCC---CCCeeeE---CCchHHHHHHHHHHh--------CC---CCEEEEECC--HHHHHHHHHH--
Confidence 5789999999999997 8999999 899999999998864 23 433333333 5888888876
Q ss_pred CCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCH
Q psy10030 189 YFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDP 268 (484)
Q Consensus 189 ~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp 268 (484)
||.+ +.+-. ...|.|++.+..++.. +...+.++++++++|+++. +|
T Consensus 68 -~g~~---v~~~~---------------------~~~~~Gt~~i~~a~~~------l~~~~~d~vlv~~gD~Pli---~~ 113 (256)
T 3tqd_A 68 -FGAV---VCMTS---------------------SDHQSGTERIAEAAVA------LGFEDDEIIVCLQGDEPLI---PP 113 (256)
T ss_dssp -TTCE---EEECC---------------------TTCCSHHHHHHHHHHH------TTCCTTCEEEEECTTCCCC---CH
T ss_pred -cCCe---EEEeC---------------------CCCCCcHHHHHHHHHH------hCcCCCCEEEEEeCCcccC---CH
Confidence 5633 21101 1235677776655432 2112578999999999974 45
Q ss_pred HHH----HHHHHc-CCceEEEEEEccCCC-----cccceEEEECCeEEEEEeccCCcccccccccC--C-Ccccccccce
Q psy10030 269 TFL----GYCVEQ-GAHCGVKVVEKITPG-----ESLGVLCNVDGKHKIVEYSELGNCSVFETQDQ--T-GRLKFNLGSI 335 (484)
Q Consensus 269 ~~l----g~~~~~-~~~~~~~vv~k~~~~-----e~~G~l~~~~g~~~vvEyse~~~e~~~~~~~~--~-g~~~f~~~Ni 335 (484)
..+ ..+.++ ++++++-+++-.++. ..+++++..+|+ ++.+++-+-...++.... . ....-.+.|+
T Consensus 114 ~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~--~l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~ 191 (256)
T 3tqd_A 114 DAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNY--ALYFSHAPIPWGRDTFSDKENLQLNGSHYRHV 191 (256)
T ss_dssp HHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSB--EEEEESSCSSCCTTTTTCGGGCCCSSCCEEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCE--EeEEecCCCCCCCcccccccccccCCcceEEE
Confidence 443 444443 567777777653221 135666655675 455555332101110000 0 0001236899
Q ss_pred eeeeecHHHHHHHhh
Q psy10030 336 CNHYFSLECLQRMVK 350 (484)
Q Consensus 336 ~~~~~~l~~l~~~~~ 350 (484)
+.+.|+-++|++..+
T Consensus 192 GiY~y~~~~l~~~~~ 206 (256)
T 3tqd_A 192 GIYAYRVGFLEEYLS 206 (256)
T ss_dssp EEEEEEHHHHHHHHH
T ss_pred EEEEcCHHHHHHHHh
Confidence 999999999999874
No 21
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=98.93 E-value=4.8e-08 Score=102.08 Aligned_cols=177 Identities=18% Similarity=0.201 Sum_probs=110.2
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcC
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNG 188 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~ 188 (484)
++.+|+||||.||||+.+.||.++|+ .|+|++++.++++.. .| +.-+++...+..+.+.+++.++
T Consensus 5 ~~~aiIlA~G~g~Rl~~~~pK~l~~i---~gkpli~~~l~~l~~--------~~---~~~iivv~~~~~~~i~~~~~~~- 69 (456)
T 2v0h_A 5 ALSAVILAAGKGTRMYSDLPKVLHTI---AGKPMVKHVIDTAHQ--------LG---SENIHLIYGHGGDLMRTHLANE- 69 (456)
T ss_dssp CEEEEEECCCCCGGGCSSSCGGGSEE---TTEEHHHHHHHHHHH--------TT---CSCEEEEECTTHHHHHHHTTTC-
T ss_pred cceEEEECCCCCcccCCCCCccccEE---CCccHHHHHHHHHHh--------CC---CCcEEEEeCCCHHHHHHHhhcC-
Confidence 68899999999999998889999999 899999999988864 23 4444444455567777776542
Q ss_pred CCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCH
Q psy10030 189 YFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDP 268 (484)
Q Consensus 189 ~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp 268 (484)
+ +.+..| ..+.|+++.+....+. + ...+++++++.|+++. ++
T Consensus 70 --~-----~~~v~~---------------------~~~~g~~~~~~~~~~~-----~--~~~~~vlv~~~D~P~i---~~ 111 (456)
T 2v0h_A 70 --Q-----VNWVLQ---------------------TEQLGTAHAVQQAAPF-----F--KDNENIVVLYGDAPLI---TK 111 (456)
T ss_dssp --C-----CEEEEC---------------------SCCCCHHHHHHHHGGG-----C--CTTSEEEEEETTCTTC---CH
T ss_pred --C-----cEEEeC---------------------CCCCCcHHHHHHHHHh-----c--CCCCeEEEEcCCccee---CH
Confidence 2 222221 1245666544433221 1 1257999999999863 34
Q ss_pred HHHHHHHHc--CCceEEEEEEccCCCcccceEEEECCeE-EEEEeccCCcccccccccCCCcccccccceeeeeecHHHH
Q psy10030 269 TFLGYCVEQ--GAHCGVKVVEKITPGESLGVLCNVDGKH-KIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLECL 345 (484)
Q Consensus 269 ~~lg~~~~~--~~~~~~~vv~k~~~~e~~G~l~~~~g~~-~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~l 345 (484)
..+..+.+. ..++++-+++..+| ...|.+...+|+. .++|..+..+. . ......|++.+.|+.+.|
T Consensus 112 ~~i~~l~~~~~~~~~~~~~~~~~~~-~~~g~v~~~~g~v~~~~ek~~~~~~-~---------~~~~~~~~Giy~~~~~~l 180 (456)
T 2v0h_A 112 ETLEKLIEAKPENGIALLTVNLDNP-TGYGRIIRENGNVVAIVEQKDANAE-Q---------LNIKEVNTGVMVSDGASF 180 (456)
T ss_dssp HHHHHHHHHCCTTSEEEEEEECSSC-TTSCEEEEETTEEEEEECTTTCCHH-H---------HTCCEEEEEEEEEEHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEeecCCC-CccceEEEcCCcEEEEEECCCCChh-H---------hcCcEEEEEEEEEEHHHH
Confidence 444433321 25666666666655 3467776556653 23343222211 0 012357888899999877
Q ss_pred HHHh
Q psy10030 346 QRMV 349 (484)
Q Consensus 346 ~~~~ 349 (484)
.+..
T Consensus 181 ~~~l 184 (456)
T 2v0h_A 181 KKWL 184 (456)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6655
No 22
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=98.93 E-value=9e-09 Score=101.26 Aligned_cols=183 Identities=16% Similarity=0.109 Sum_probs=116.7
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCcccc-EEEEeCCCCchHHHHHHHHc
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLP-WFIMTSELTDRPTREYFERN 187 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ip-l~iMtS~~t~e~t~~~l~~~ 187 (484)
++.+||||||.||||+ +|.+.|+ .|+|++++.++++.. .| +. ++|.| + ++.+.+++++
T Consensus 18 ~~~aIIlA~G~stRlp---~K~L~~i---~GkPmi~~~l~~l~~--------~~---i~~IvV~t-~--~~~i~~~~~~- 76 (264)
T 3k8d_A 18 SFVVIIPARYASTRLP---GKPLVDI---NGKPMIVHVLERARE--------SG---AERIIVAT-D--HEDVARAVEA- 76 (264)
T ss_dssp CCEEEEECCSCCSSST---TGGGCEE---TTEEHHHHHHHHHHH--------TT---CSEEEEEE-S--CHHHHHHHHH-
T ss_pred ceEEEEEcCCCCCCCC---CcceeeE---CCeEHHHHHHHHHHh--------CC---CCEEEEEC-C--HHHHHHHHHH-
Confidence 5789999999999994 5999999 999999999998864 23 33 34444 3 6788888876
Q ss_pred CCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCC
Q psy10030 188 GYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGD 267 (484)
Q Consensus 188 ~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~D 267 (484)
||.. +.+-.| ..|.|++++..++. .+...+.++++++++|+++. +
T Consensus 77 --~g~~---v~~~~~---------------------~~~~Gt~~i~~~~~------~l~~~~~d~vlv~~gD~Pli---~ 121 (264)
T 3k8d_A 77 --AGGE---VCMTRA---------------------DHQSGTERLAEVVE------KCAFSDDTVIVNVQGDEPMI---P 121 (264)
T ss_dssp --TTCE---EEECCT---------------------TCCSHHHHHHHHHH------HHTCCTTCEEEEECTTCTTC---C
T ss_pred --cCCE---EEEecC---------------------CCCCCHHHHHHHHH------HhccCCCCEEEEEcCCcccC---C
Confidence 5532 211011 23678887665542 22213578999999999974 4
Q ss_pred HHH----HHHHHHcCCceEEEEEEccCCCc-----ccceEEEECCeEEEEEeccCCc-cccccccc--CCCcccccccce
Q psy10030 268 PTF----LGYCVEQGAHCGVKVVEKITPGE-----SLGVLCNVDGKHKIVEYSELGN-CSVFETQD--QTGRLKFNLGSI 335 (484)
Q Consensus 268 p~~----lg~~~~~~~~~~~~vv~k~~~~e-----~~G~l~~~~g~~~vvEyse~~~-e~~~~~~~--~~g~~~f~~~Ni 335 (484)
|.. +..+.+.++++++-+++-.++.+ .++++...+|+ ++.+++-+. . .++... ..-...-...|+
T Consensus 122 ~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~~g~--~l~fsr~~ip~-~r~~~~~~~~~~~~~~~~~~ 198 (264)
T 3k8d_A 122 ATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGY--ALYFSRATIPW-DRDRFAEGLETVGDNFLRHL 198 (264)
T ss_dssp HHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEEECTTSB--EEEEESSCCSC-CHHHHHHCSSCCCSCCEEEC
T ss_pred HHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEEECCCCe--EEEEecCCCCC-CCccccccccccCCcceEEE
Confidence 544 44445567889988887664432 23555444564 556666432 2 111000 000001236799
Q ss_pred eeeeecHHHHHHHhh
Q psy10030 336 CNHYFSLECLQRMVK 350 (484)
Q Consensus 336 ~~~~~~l~~l~~~~~ 350 (484)
+.+.|+-++|++...
T Consensus 199 GiY~y~~~~l~~~~~ 213 (264)
T 3k8d_A 199 GIYGYRAGFIRRYVN 213 (264)
T ss_dssp SEEEEEHHHHHHHHH
T ss_pred EEEEECHHHHHHHHh
Confidence 999999999998864
No 23
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=98.89 E-value=5.4e-10 Score=115.84 Aligned_cols=96 Identities=26% Similarity=0.376 Sum_probs=65.0
Q ss_pred HHHHHHHHhhhccCCeeeeeecCCcccccCCCCCCccccccHHHHhhhhhhccccccccc------------cccCCCCc
Q psy10030 15 GKYRELGLKLISRGDVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQELSGVQLSE------------VQVFPPNC 82 (484)
Q Consensus 15 ~~~~~~g~~~~~~~~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L~ai~~~~------------~~p~~~~~ 82 (484)
.+|++.|+++|++|+|||++||||||||||.++||||++|+++ .++.+.++...+..+ -..+|+..
T Consensus 21 ~~~~~~Gl~~i~~gkvavvlLAGG~GTRLG~~~PK~~~~Vgl~--~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~I 98 (405)
T 3oc9_A 21 KEHYYRGLELISQGKTALITPAGGQGSRLGFEHPKGMFVLPFE--IPKSIFQMTSERLLRLQELASEYSHQKNVMIHWFL 98 (405)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSBCTTTTCCSBGGGCEECSS--SCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEE
T ss_pred HHHHHHHHHHHhcCceEEEEecCCCcccccCCCCCccccccCC--CCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEEE
Confidence 4899999999999999999999999999999999999999886 234333333222111 13567777
Q ss_pred ccCCCCCChhhHHHHHHh----chh-----cccCCCEEEEE
Q psy10030 83 LSGVNTVDASTLGKYREL----GLK-----LISRGDVAVIV 114 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~----G~~-----~i~~gkvavvi 114 (484)
|.+..+ .+...++-+. |++ .+.++++.++-
T Consensus 99 MtS~~t--~e~t~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~ 137 (405)
T 3oc9_A 99 MTNEET--IEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVD 137 (405)
T ss_dssp EECTTT--HHHHHHHHHHTGGGGSCTTSEEEEECCEEECBC
T ss_pred EeCCcc--HHHHHHHHHhCcccCCCccceEEEeeCceeEEe
Confidence 776543 3444444433 442 23455555553
No 24
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.88 E-value=4.9e-08 Score=101.59 Aligned_cols=196 Identities=17% Similarity=0.218 Sum_probs=122.6
Q ss_pred CEEEEEEcCCCCcccc---ccCCCccccccCCCCC-cHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLG---ADYPKGMYNIGLPSGK-SLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYF 184 (484)
Q Consensus 109 kvavviLaGG~GTRLG---~~~PKg~~~i~l~~~~-s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l 184 (484)
++.+||||||.||||+ .+.||.++|+ .|+ |++++.++++.. .| +.-+++...+.++.+.+++
T Consensus 12 ~~~avILAaG~gtRl~plT~~~pK~llpi---~gk~pli~~~l~~l~~--------~g---i~~i~vv~~~~~~~i~~~~ 77 (420)
T 3brk_X 12 DAMAYVLAGGRGSRLKELTDRRAKPAVYF---GGKARIIDFALSNALN--------SG---IRRIGVATQYKAHSLIRHL 77 (420)
T ss_dssp GEEEEEEECCCCGGGGGGGSSSCGGGSEE---TTTEETHHHHHHHHHH--------TT---CCEEEEEECTTCHHHHHHH
T ss_pred ceEEEEEcCCCCCccchhhcCCccccccc---CCCCcHHHHHHHHHHh--------CC---CCeEEEEeCCChHHHHHHH
Confidence 5789999999999998 6789999999 899 999999998864 23 5555556667788999999
Q ss_pred HHcCCCCCCC----CcEEEEEcCCccccccCCcccccCCCcceecc---CCCchHhHHHhhcChHHHHHHcCCeEEEEEe
Q psy10030 185 ERNGYFGLDP----AHVIFFKQRSMPCFSLSGEILLETRDRVARSP---DGHGGLYHALGATGILDTMHTRGIKHIHVYC 257 (484)
Q Consensus 185 ~~~~~fgl~~----~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P---~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~ 257 (484)
++. |+++. ..+.+. . .......| .|+++.+... ++.+...+.++++|++
T Consensus 78 ~~~--~~~~~~~~~~~v~i~----------------~-~~~~~~~~~~~~Gt~~al~~a-----~~~l~~~~~~~~lv~~ 133 (420)
T 3brk_X 78 QRG--WDFFRPERNESFDIL----------------P-ASQRVSETQWYEGTADAVYQN-----IDIIEPYAPEYMVILA 133 (420)
T ss_dssp HHH--SCCCCGGGTCEEEEE----------------C-CC-------CCCCHHHHHHTT-----HHHHHHHCCSEEEEEE
T ss_pred hhh--hccccccccCCEEEe----------------C-ccccccCCccccCCHHHHHHH-----HHHHHhcCCCEEEEec
Confidence 875 45431 112110 0 00000013 6777766532 2334333568999999
Q ss_pred CCCCccccCCHHHHHHHHHcCCceEEEEEEcc-CCCcccceEEEE-CCeEEEEEeccCCcccccccccCCCcccccccce
Q psy10030 258 VDNILVKVGDPTFLGYCVEQGAHCGVKVVEKI-TPGESLGVLCNV-DGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSI 335 (484)
Q Consensus 258 vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~-~~~e~~G~l~~~-~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni 335 (484)
.|++. ...--.++..+.++++++++-+.+.. .+....|++... +|+ ++++.|-+.. ..+..+. ......|+
T Consensus 134 ~D~~~-~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~~g~--v~~~~ekp~~-~~~~~~~---~~~~~~~~ 206 (420)
T 3brk_X 134 GDHIY-KMDYEYMLQQHVDSGADVTIGCLEVPRMEATGFGVMHVNEKDE--IIDFIEKPAD-PPGIPGN---EGFALASM 206 (420)
T ss_dssp SSCEE-CBCTHHHHHHHHHTTCSEEEEEEEEETTGGGGSEEEEECTTSB--EEEEEESCSS-CCCBTTB---TTEEEEEE
T ss_pred ccEEE-chHHHHHHHHHHHcCCeEEEEEeecCccccCcccEEEECCCCc--EEEeEeCCCc-ccccccc---ccceEEee
Confidence 99964 33334577888888888877666542 123467887654 454 3444443322 1111111 11246789
Q ss_pred eeeeecHHHHHHHh
Q psy10030 336 CNHYFSLECLQRMV 349 (484)
Q Consensus 336 ~~~~~~l~~l~~~~ 349 (484)
+.++|+-++|.+.+
T Consensus 207 Giy~~~~~~l~~~l 220 (420)
T 3brk_X 207 GIYVFHTKFLMEAV 220 (420)
T ss_dssp EEEEEEHHHHHHHH
T ss_pred eeEEEeHHHHHHHH
Confidence 99999998876655
No 25
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=98.86 E-value=8.8e-09 Score=103.12 Aligned_cols=188 Identities=15% Similarity=0.116 Sum_probs=104.6
Q ss_pred CEEEEEEcCCCCccccc----cCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccc-cEEEEeCCCCchHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGA----DYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCL-PWFIMTSELTDRPTREY 183 (484)
Q Consensus 109 kvavviLaGG~GTRLG~----~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~i-pl~iMtS~~t~e~t~~~ 183 (484)
++.+||||||.||||+. +.||.++|+ ..|+|++++.++++.. . + .++|.|.....+.+.++
T Consensus 4 ~~~avIlAgG~gtRl~plt~~~~pK~ll~i--~gg~pli~~~l~~l~~-----------~-~~~i~vv~~~~~~~~i~~~ 69 (308)
T 2qh5_A 4 KIKNILLSGGSGKRLWPLSRSLYPKQFLKL--FDHKSLFELSFKRNAS-----------L-VDETLIVCNEKHYFLALEE 69 (308)
T ss_dssp CEEEEEECC-------------CCGGGCTT--BTTBCHHHHHHHHHHT-----------T-CSEEEEEEEGGGHHHHHHH
T ss_pred ccEEEEEcCCCCccCCccCCCCCCCEEEEC--CCCCCHHHHHHHHHHc-----------c-CCCEEEEEChhHHHHHHHH
Confidence 57889999999999962 579999998 2389999999888853 2 3 34555554434677788
Q ss_pred HHHcCCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCcc
Q psy10030 184 FERNGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILV 263 (484)
Q Consensus 184 l~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~ 263 (484)
++++ +|++ ++.+..| ..|.|+|+.+...... + ..-++++|+++|+++.
T Consensus 70 ~~~~--~~~~--~~~~i~~---------------------~~~~gt~~al~~a~~~-----l--~~~~~~lv~~~D~~~~ 117 (308)
T 2qh5_A 70 IKNE--IKNK--SVGFLLE---------------------SLSKNTANAIALSALM-----S--DKEDLLIVTPSDHLIK 117 (308)
T ss_dssp TTTT--CSSC--EEEEEEE---------------------SSCCCHHHHHHHHHHT-----S--CTTSEEEEEESSCBCC
T ss_pred HHHh--hCCC--ccEEEeC---------------------CCCCChHHHHHHHHHH-----h--CCCCeEEEEcCCcccc
Confidence 7653 4542 2332222 2367888886654321 1 1245799999999852
Q ss_pred ccC-CHHHHHH---HHHcCCceEEEEEEccCCCcccceEEEE-CCeEEEEEeccCCcccccccccCCCcccccccceeee
Q psy10030 264 KVG-DPTFLGY---CVEQGAHCGVKVVEKITPGESLGVLCNV-DGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNH 338 (484)
Q Consensus 264 ~~~-Dp~~lg~---~~~~~~~~~~~vv~k~~~~e~~G~l~~~-~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~ 338 (484)
... --.++.. +.+++.++++.+.+. .+....|++... +|+ |+++.|-|....++.....| -...|++.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~-~~~~~~g~i~~d~~~~--V~~~~Ekp~~~~~~~~~~~g---~~~~n~Giy 191 (308)
T 2qh5_A 118 DLQAYENAIKKAIDLAQKGFLVTFGVSID-KPNTEFGYIESPNGLD--VKRFIEKPSLDKAIEFQKSG---GFYFNSGMF 191 (308)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEECS-SCCTTSEEEECSSSSB--CSEEEESCCHHHHHHHHHHC---CEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEEecC-CCCCCceEEEECCCCE--EEEEEECCChHHHHHHhhcC---CeEEEeEEE
Confidence 111 1124444 445677777666654 355678888643 343 33343333220111000011 136789999
Q ss_pred eecHHHHHHH
Q psy10030 339 YFSLECLQRM 348 (484)
Q Consensus 339 ~~~l~~l~~~ 348 (484)
+|+.+++.+.
T Consensus 192 ~~~~~~ll~~ 201 (308)
T 2qh5_A 192 VFQAGVFLDE 201 (308)
T ss_dssp EEEHHHHHHH
T ss_pred EEEHHHHHHH
Confidence 9998865333
No 26
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=98.85 E-value=2.1e-08 Score=99.66 Aligned_cols=183 Identities=17% Similarity=0.166 Sum_probs=112.2
Q ss_pred CEEEEEEcCCCCccccc---cCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGA---DYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFE 185 (484)
Q Consensus 109 kvavviLaGG~GTRLG~---~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~ 185 (484)
.+.+||||||.||||+. +.||.++|| .|+|++++.++++.. .| +.-+++...+..+.+.+++.
T Consensus 8 ~~~avIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~--------~g---i~~i~vv~~~~~~~i~~~~~ 73 (302)
T 2e3d_A 8 VKKAVIPVAGLGTRMLPATKAIPKEMLPL---VDKPLIQYVVNECIA--------AG---ITEIVLVTHSSKNSIENHFD 73 (302)
T ss_dssp CCEEEEECCSCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHH--------TT---CCEEEEEECGGGHHHHHHHS
T ss_pred ccEEEEECCcCcccCCccccCCCceeeEE---CCeEHHHHHHHHHHH--------CC---CCEEEEEeCCCHHHHHHHHh
Confidence 46789999999999985 679999999 899999999988863 23 44444444556788888886
Q ss_pred HcC----------------------CCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHH
Q psy10030 186 RNG----------------------YFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILD 243 (484)
Q Consensus 186 ~~~----------------------~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~ 243 (484)
+.. .+|. +|.+.. ...|.|+|+.+.....
T Consensus 74 ~~~~l~~~l~~~~~~~~l~~~~~~~~~~~---~i~~~~---------------------~~~~~Gt~~al~~a~~----- 124 (302)
T 2e3d_A 74 TSFELEAMLEKRVKRQLLDEVQSICPPHV---TIMQVR---------------------QGLAKGLGHAVLCAHP----- 124 (302)
T ss_dssp CCHHHHHHHC----CHHHHHHHHTSCTTC---EEEEEE---------------------CSSCCCHHHHHHHTHH-----
T ss_pred cchhhhhhhhhccchhhhhhhhhccccCc---ceEEee---------------------CCccCCHHHHHHHHHH-----
Confidence 410 0111 121111 1236788886664322
Q ss_pred HHHHcCCeEEEEEeCCCCccc---cC---CH-HHHHHHHHcCCceEEEEEEccCCCcccceEEE-----ECC-eEEEEEe
Q psy10030 244 TMHTRGIKHIHVYCVDNILVK---VG---DP-TFLGYCVEQGAHCGVKVVEKITPGESLGVLCN-----VDG-KHKIVEY 310 (484)
Q Consensus 244 ~l~~~G~~~i~v~~vDN~l~~---~~---Dp-~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~-----~~g-~~~vvEy 310 (484)
.+ +-++++|+++|+++.. .. +. .++..+.+.++ +++-+.+. .+...+|++.. .+| -..+..+
T Consensus 125 ~~---~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~-~~~~~yg~v~~~~~~~~~g~~~~v~~~ 199 (302)
T 2e3d_A 125 VV---GDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH-SQIMVEPV-ADVTAYGVVDCKGVELAPGESVPMVGV 199 (302)
T ss_dssp HH---CSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC-EEEEEEEC-SCGGGSEEEECTTCCCCTTCEEEECEE
T ss_pred Hc---CCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC-cEEEEEEc-cCCCCccEEEecccccCCCCceeEEEE
Confidence 22 2368999999999621 12 22 35666766666 54444444 35567888764 345 2244444
Q ss_pred ccCCcccccccccCCCcccccccceeeeeecHHHHHHH
Q psy10030 311 SELGNCSVFETQDQTGRLKFNLGSICNHYFSLECLQRM 348 (484)
Q Consensus 311 se~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~l~~~ 348 (484)
.|-+.... . .-...|++.++|+-++++.+
T Consensus 200 ~ekp~~~~-----~----~~~~~~~Giyi~~~~~l~~l 228 (302)
T 2e3d_A 200 VEKPKADV-----A----PSNLAIVGRYVLSADIWPLL 228 (302)
T ss_dssp EESCCTTT-----C----SCSEEEEEEEEECTTHHHHH
T ss_pred EECCCCCc-----c----ccceEEEEEEEECHHHHHHH
Confidence 44332100 0 11356888999998766544
No 27
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=98.85 E-value=5e-09 Score=102.29 Aligned_cols=171 Identities=15% Similarity=0.142 Sum_probs=103.0
Q ss_pred EEEEcCCCCccccc---cCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHc-
Q psy10030 112 VIVLAGGQGTRLGA---DYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERN- 187 (484)
Q Consensus 112 vviLaGG~GTRLG~---~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~- 187 (484)
+||||||+||||+. +.||.|+|| .|+|++++.++.+.. ..| +.-+++...+.++ +.++++++
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv---~gkpli~~~l~~l~~-------~~g---i~~iivv~~~~~~-~~~~~~~~~ 67 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEA---HGQTLFEHSVNSFAA-------YFA---STPFLFIVRNVYD-TAVFVREKA 67 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEE---TTEEHHHHHHGGGGG-------GTT---TSCEEEEEESSTT-HHHHHHHHH
T ss_pred EEEEcCCCCcccccCCCCCCccccEE---CCeEHHHHHHHHHhc-------cCC---CceEEEEECchhh-hHHHHHHHH
Confidence 68999999999964 789999999 899999999988753 124 4443333345555 66666553
Q ss_pred CCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHH---cCCeEEEEEeCCCCccc
Q psy10030 188 GYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHT---RGIKHIHVYCVDNILVK 264 (484)
Q Consensus 188 ~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~---~G~~~i~v~~vDN~l~~ 264 (484)
..+|.+... .+..| ..|.|+|+....... .+.+ .+-+.++|+++|++...
T Consensus 68 ~~~~~~~~~-~~~~~---------------------~~~~Gt~~av~~a~~-----~l~~~~~~~~~~~lV~~gD~l~~~ 120 (255)
T 4evw_A 68 TQLGIKQFY-IAELH---------------------TETRGQAETVTLGLE-----ELAKQGVDYQGSITVFNIDTFRPN 120 (255)
T ss_dssp HHHTCSSEE-EEEES---------------------SCCSSHHHHHHHHHH-----HHHHTTCCCCSCEEECCTTEECTT
T ss_pred HHcCCCCce-EEEeC---------------------CCCCCHHHHHHHHHH-----HHhhcccCCCCcEEEEeCCEEEec
Confidence 123432111 22223 236899887775432 2321 24566999999996421
Q ss_pred cCCHHHHHHHHHcCCceEEEEEEccCCCcccceEEEE-CCeEEEEEeccCCcccccccccCCCcccccccceeeeeecHH
Q psy10030 265 VGDPTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNV-DGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLE 343 (484)
Q Consensus 265 ~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~-~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~ 343 (484)
...+.+ ..+.+.++-+.+..+| ++|++... +|-.+|+++.|-.+. -+..|+..++|+-.
T Consensus 121 ~~~~~~-----~~~~~~~i~~~~~~~p--~yG~v~~d~~g~~~V~~i~EK~~~-------------s~~~~~GiY~f~~~ 180 (255)
T 4evw_A 121 FVFPDI-----SQHSDGYLEVFQGGGD--NWSFAKPEHAGSTKVIQTAEKNPI-------------SDLCSTGLYHFNRK 180 (255)
T ss_dssp CCCCGG-----GGSSSEEEEEEECCSS--CSCEEEESSTTCCBEEEEESSSCS-------------SSEEEEEEEEESCH
T ss_pred chhHHH-----hhcCCcEEEEEecCCC--ceeEEEECCCCCeEEEEEEeccCc-------------cCcEEEeEEEECcH
Confidence 111222 3567777666665544 78988765 452234444332111 03578889999864
No 28
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=98.81 E-value=7.6e-10 Score=117.82 Aligned_cols=53 Identities=42% Similarity=0.698 Sum_probs=48.0
Q ss_pred CCCCCChhHHHHHHHHHHhhhccCCeeeeeecCCcccccCCCCCCccccccHH
Q psy10030 5 GVNTVDASTLGKYRELGLKLISRGDVAVIVLAGGQGTRLGADYPNRIESIKIQ 57 (484)
Q Consensus 5 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~aggqg~~l~~~~pkg~~~i~~~ 57 (484)
+..+++++.+.+|++.|+++|++||+||++||||||||||.+.||+|++|+++
T Consensus 79 ~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLaGG~GTRLg~~~PK~l~~v~l~ 131 (486)
T 2yqc_A 79 STLDLSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELP 131 (486)
T ss_dssp ETTTSCHHHHHHHHHHHHHHHHTTCEEEEEEEESBCGGGTCSSBGGGCBCCCT
T ss_pred ccccCChHHHHHHHHHHHHHHhhCCeEEEEEcCCccccCCCCCCCccceecCC
Confidence 34455678889999999999999999999999999999999999999999864
No 29
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.81 E-value=4.8e-08 Score=102.43 Aligned_cols=207 Identities=13% Similarity=0.164 Sum_probs=114.6
Q ss_pred CEEEEEEcCCCCcccc---ccCCCccccccCCCCC-cHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLG---ADYPKGMYNIGLPSGK-SLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYF 184 (484)
Q Consensus 109 kvavviLaGG~GTRLG---~~~PKg~~~i~l~~~~-s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l 184 (484)
++.+|+||||.||||+ .+.||.|+|+ .|+ |++++.++++.. .| +.-+++...+.++.+.+++
T Consensus 20 ~~~avILAaG~gtRl~plT~~~pK~llpi---~g~~pli~~~l~~l~~--------~g---~~~i~vv~~~~~~~i~~~~ 85 (451)
T 1yp2_A 20 SVLGIILGGGAGTRLYPLTKKRAKPAVPL---GANYRLIDIPVSNCLN--------SN---ISKIYVLTQFNSASLNRHL 85 (451)
T ss_dssp HEEEEEC------CCTTTTTTSCGGGCEE---TTTEETTHHHHHHHHH--------TT---CCEEEEEESCCCHHHHHHH
T ss_pred ceEEEEECCCCCCcccchhcCCcceeeEE---CCcceeHHHHHHHHHH--------CC---CCEEEEEeccCHHHHHHHH
Confidence 3779999999999998 5789999999 798 999999888864 34 5555555567788899998
Q ss_pred HHcCCCC--CCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCc
Q psy10030 185 ERNGYFG--LDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNIL 262 (484)
Q Consensus 185 ~~~~~fg--l~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l 262 (484)
.+. +| +.+ ++.++.+..+..+ ....-...+.|+|+.+.... +.+...+.++++|+++|++.
T Consensus 86 ~~~--~~~~~~~----~~~~~~v~i~~~~------~~~~~~~~~~Gt~~al~~a~-----~~~~~~~~~~~lv~~~D~~~ 148 (451)
T 1yp2_A 86 SRA--YASNMGG----YKNEGFVEVLAAQ------QSPENPDWFQGTADAVRQYL-----WLFEEHTVLEYLILAGDHLY 148 (451)
T ss_dssp HHH--CC------------CCEEEEEESC------SSTTSCCCCCSHHHHHHHTH-----HHHTTSCCSEEEEECSCEEC
T ss_pred hhh--hhccccc----ccccCcEEEeccc------ccccccccccCcHHHHHHHH-----HHHHhcCCCeEEEecCcEEE
Confidence 763 22 110 0011111111000 00000122468877666432 23322346899999999963
Q ss_pred cccCCHHHHHHHHHcCCceEEEEEEcc-CCCcccceEEEE-CCeEEEEEeccCCcccccc-c------ccCC---Ccccc
Q psy10030 263 VKVGDPTFLGYCVEQGAHCGVKVVEKI-TPGESLGVLCNV-DGKHKIVEYSELGNCSVFE-T------QDQT---GRLKF 330 (484)
Q Consensus 263 ~~~~Dp~~lg~~~~~~~~~~~~vv~k~-~~~e~~G~l~~~-~g~~~vvEyse~~~e~~~~-~------~~~~---g~~~f 330 (484)
...-..++.++.++++++++-+.+.. .+....|++... +| +++++.|-+....+. + .... .....
T Consensus 149 -~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~~~--~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~ 225 (451)
T 1yp2_A 149 -RMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEG--RIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMP 225 (451)
T ss_dssp -CCCHHHHHHHHHHTTCSEEEEEEEECHHHHTTSEEEEECTTS--BEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCC
T ss_pred -cCCHHHHHHHHHHcCCcEEEEEEEcChhhcccCCEEEECCCC--CEEEEEECCCchhhccccccccccccccccccCCc
Confidence 33223477888888888877655542 122467877654 34 445555544320000 0 0000 00012
Q ss_pred cccceeeeeecHHHHHHHh
Q psy10030 331 NLGSICNHYFSLECLQRMV 349 (484)
Q Consensus 331 ~~~Ni~~~~~~l~~l~~~~ 349 (484)
...|++.++|+-+.|.+++
T Consensus 226 ~~~~~Giy~~~~~~l~~~l 244 (451)
T 1yp2_A 226 FIASMGIYVISKDVMLNLL 244 (451)
T ss_dssp EEEEEEEEEEEHHHHHHHH
T ss_pred ceEEeeEEEEcHHHHHHHH
Confidence 3678999999999886655
No 30
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=98.79 E-value=2e-08 Score=99.61 Aligned_cols=186 Identities=15% Similarity=0.154 Sum_probs=103.0
Q ss_pred CCEEEEEEcCCCCccccc---cCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHH
Q psy10030 108 GDVAVIVLAGGQGTRLGA---DYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYF 184 (484)
Q Consensus 108 gkvavviLaGG~GTRLG~---~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l 184 (484)
..+.+||||||.||||+. ..||.++|+ .|+|++++.++++.. .| +.-+++...+..+.+.+++
T Consensus 13 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~--------~g---~~~i~vv~~~~~~~i~~~~ 78 (297)
T 2ux8_A 13 PLRKAVFPVAGLGTRFLPATKAMPKEMLPV---VDRPLIQYAVDEAVE--------AG---IEQMIFVTGRGKSALEDHF 78 (297)
T ss_dssp CCCEEEEEECCCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHH--------TT---CCEEEEEECTTCHHHHHHT
T ss_pred CccEEEEECCCCccccCccccCCCceeeeE---CCeEHHHHHHHHHHh--------CC---CCEEEEEeCCCHHHHHHHH
Confidence 357889999999999975 779999999 799999999988863 23 5555555566688888887
Q ss_pred HHcC-------------------C-CCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHH
Q psy10030 185 ERNG-------------------Y-FGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDT 244 (484)
Q Consensus 185 ~~~~-------------------~-fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~ 244 (484)
.+.. . +|+ ++.+.. ...|.|+|+.+.... +.
T Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~~~~~g~---~i~~~~---------------------~~~~~Gt~~al~~a~-----~~ 129 (297)
T 2ux8_A 79 DIAYELEATMAARGKSLDVLDGTRLKPG---NIAYVR---------------------QQEPMGLGHAVWCAR-----DI 129 (297)
T ss_dssp SCCHHHHHHHHTTTCCGGGGTTSCCSTT---SEEEEE---------------------CCSCCCHHHHHHTTH-----HH
T ss_pred hhhhhhhhhhhhccchhhhhhhcccCCC---ceEEEe---------------------CCCCCChHHHHHHHH-----HH
Confidence 5410 0 111 122111 123678888766432 22
Q ss_pred HHHcCCeEEEEEeCCCCccc-cCC-HHHHHHHHHcCCceEEEEEEcc-CCCcccceEEEE---CCeEEEEEeccCCcccc
Q psy10030 245 MHTRGIKHIHVYCVDNILVK-VGD-PTFLGYCVEQGAHCGVKVVEKI-TPGESLGVLCNV---DGKHKIVEYSELGNCSV 318 (484)
Q Consensus 245 l~~~G~~~i~v~~vDN~l~~-~~D-p~~lg~~~~~~~~~~~~vv~k~-~~~e~~G~l~~~---~g~~~vvEyse~~~e~~ 318 (484)
+ +-++++|+++|+++.. ..+ -.++..+.+.++ .++.+.+.. .+..++|++... +|...+.++.|-+....
T Consensus 130 ~---~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~ 205 (297)
T 2ux8_A 130 V---GDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG-NLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGT 205 (297)
T ss_dssp H---CSSCEEEECTTEEEESSSCHHHHHHHHHHHHCS-EEEEEC-----------CCCCCCBCSSEEEC-----------
T ss_pred c---CCCcEEEEeCCeecCCChHHHHHHHHHHHhcCC-CEEEEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCC
Confidence 2 2478999999999521 122 235666666665 333232221 123467776532 33234444444332100
Q ss_pred cccccCCCcccccccceeeeeecHHHHHHHh
Q psy10030 319 FETQDQTGRLKFNLGSICNHYFSLECLQRMV 349 (484)
Q Consensus 319 ~~~~~~~g~~~f~~~Ni~~~~~~l~~l~~~~ 349 (484)
. .-...|++.++|+-++++.+.
T Consensus 206 -----~----~~~~~~~Giyi~~~~~l~~l~ 227 (297)
T 2ux8_A 206 -----A----PSNLSVIGRYILQPEVMRILE 227 (297)
T ss_dssp ------------CCCEEEEEEECTHHHHHHH
T ss_pred -----C----CccEEEEEEEEECHHHHHHHH
Confidence 0 113578899999988765543
No 31
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=98.75 E-value=8.1e-08 Score=100.89 Aligned_cols=180 Identities=16% Similarity=0.163 Sum_probs=112.2
Q ss_pred EEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcCC
Q psy10030 110 VAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNGY 189 (484)
Q Consensus 110 vavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~~ 189 (484)
-.+|+||||.||||+.+.||.++|+ .|+|++++.++++.. .| +.-+++...+..+.+.+++.+
T Consensus 12 ~~~vIlAaG~g~R~~~~~pK~l~~i---~gkpli~~~l~~l~~--------~g---~~~iivv~~~~~~~i~~~~~~--- 74 (468)
T 1hm9_A 12 NFAIILAAGKGTRMKSDLPKVLHKV---AGISMLEHVFRSVGA--------IQ---PEKTVTVVGHKAELVEEVLAG--- 74 (468)
T ss_dssp EEEEEECCCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHHT--------TC---CSEEEEEECTTHHHHHHSSSS---
T ss_pred CcEEEEcCCCCccCCCCCCcEeeEE---CCccHHHHHHHHHHh--------cC---CCCEEEEECCCHHHHHHHhCC---
Confidence 4578999999999998889999999 899999999988853 23 544555555555655554432
Q ss_pred CCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCH-
Q psy10030 190 FGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDP- 268 (484)
Q Consensus 190 fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp- 268 (484)
.+.+..| ..+.|+++.+.... +.+ ....++++|++.|.++....+.
T Consensus 75 ------~i~~v~~---------------------~~~~G~~~sl~~a~-----~~~-~~~~~~vlv~~~D~P~i~~~~i~ 121 (468)
T 1hm9_A 75 ------QTEFVTQ---------------------SEQLGTGHAVMMTE-----PIL-EGLSGHTLVIAGDTPLITGESLK 121 (468)
T ss_dssp ------SSEEEEC---------------------SSCCCHHHHHHTTH-----HHH-TTCCSEEEEEETTCTTCCHHHHH
T ss_pred ------CcEEEeC---------------------CccCChHHHHHHHH-----HHh-ccCCCeEEEEeCCccccCHHHHH
Confidence 1222111 12457776655322 223 2225899999999986432222
Q ss_pred HHHHHHHHcCCceEEEEEEccCCCcccceEEEE-CCeEEEEEeccCCcccccccccCCCcccccccceeeeeecHHHHHH
Q psy10030 269 TFLGYCVEQGAHCGVKVVEKITPGESLGVLCNV-DGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLECLQR 347 (484)
Q Consensus 269 ~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~-~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~l~~ 347 (484)
.++..+.+.++++++-+.+..+| ...|.+... +|+ ++++.+-+.. ..+. ......|+..++|+.++|.+
T Consensus 122 ~l~~~~~~~~~~~~i~~~~~~~~-~~~g~v~~d~~g~--v~~~~ek~~~-~~~~------~~~~~~~~Giy~f~~~~l~~ 191 (468)
T 1hm9_A 122 NLIDFHINHKNVATILTAETDNP-FGYGRIVRNDNAE--VLRIVEQKDA-TDFE------KQIKEINTGTYVFDNERLFE 191 (468)
T ss_dssp HHHHHHHHTTCSEEEEEEECSCC-TTSCEEEECTTCC--EEEEECTTTC-CTTG------GGCCEEEEEEEEEEHHHHHH
T ss_pred HHHHHHHhcCCcEEEEEeccCCC-CceeEEEECCCCC--EEEEEECCCC-ChHH------hcCeEEEEEEEEEEHHHHHH
Confidence 24556666788888877777655 357877654 443 4444443321 0000 11236788899999987765
Q ss_pred Hh
Q psy10030 348 MV 349 (484)
Q Consensus 348 ~~ 349 (484)
.+
T Consensus 192 ~l 193 (468)
T 1hm9_A 192 AL 193 (468)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 32
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=98.75 E-value=1.3e-07 Score=90.66 Aligned_cols=174 Identities=14% Similarity=0.122 Sum_probs=104.8
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcC
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNG 188 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~ 188 (484)
++.+||||||.||||+ ||.+.|+ .|+|++++.+++++. .| ..-.+++.|. + +.+.++++++
T Consensus 2 ~~~aiIlA~G~~~R~~---~K~l~~i---~g~pli~~~i~~~~~--------~~-~~~~ivvv~~-~--~~i~~~~~~~- 62 (245)
T 1h7e_A 2 KAVIVIPARYGSSRLP---GKPLLDI---VGKPMIQHVYERALQ--------VA-GVAEVWVATD-D--PRVEQAVQAF- 62 (245)
T ss_dssp CEEEEEECCSCCSSST---TGGGCEE---TTEEHHHHHHHHHHT--------CT-TCCEEEEEES-C--HHHHHHHHHT-
T ss_pred CeEEEEEcCCcCCCCC---CCccccc---CCchHHHHHHHHHHh--------CC-CCCeEEEECC-c--HHHHHHHHHc-
Confidence 5789999999999996 9999999 899999999888853 22 1124455553 3 7788888763
Q ss_pred CCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCH
Q psy10030 189 YFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDP 268 (484)
Q Consensus 189 ~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp 268 (484)
|+. + +. . + ...+.|+++++.++.. .+.++++|+++|+++. ++
T Consensus 63 --~~~---~--~~---------------~-~---~~~~~g~~~~~~~~~~---------~~~~~~lv~~~D~P~~---~~ 104 (245)
T 1h7e_A 63 --GGK---A--IM---------------T-R---NDHESGTDRLVEVMHK---------VEADIYINLQGDEPMI---RP 104 (245)
T ss_dssp --TCE---E--EE---------------C-C---SCCSSHHHHHHHHHHH---------SCCSEEEECCTTCTTC---CH
T ss_pred --CCe---E--Ee---------------C-C---CccCCcHHHHHHHHHh---------CCCCEEEEEcCCcCcC---CH
Confidence 421 2 11 0 0 1124566666665432 2468999999999973 34
Q ss_pred H----HHHHHHHc-CCceEEEEEEccCCC-----cccceEEEECCeEEEEEecc--CCcccccccccCCCccccccccee
Q psy10030 269 T----FLGYCVEQ-GAHCGVKVVEKITPG-----ESLGVLCNVDGKHKIVEYSE--LGNCSVFETQDQTGRLKFNLGSIC 336 (484)
Q Consensus 269 ~----~lg~~~~~-~~~~~~~vv~k~~~~-----e~~G~l~~~~g~~~vvEyse--~~~e~~~~~~~~~g~~~f~~~Ni~ 336 (484)
. ++..+... ++++++-+++. ++. ..++++...+|+. +.+++ .+.. ++ + + ..-...|++
T Consensus 105 ~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~--r~--~-~--~~~~~~~~g 174 (245)
T 1h7e_A 105 RDVETLLQGMRDDPALPVATLCHAI-SAAEAAEPSTVKVVVNTRQDA--LYFSRSPIPYP--RN--A-E--KARYLKHVG 174 (245)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEEEEE-CHHHHTCTTSCEEEECTTCBE--EEEESSCSSCC--TT--G-G--GCCEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEEeecC-CHHHhcCCCCcEEEECCCCcE--EEeecCCCCCC--cc--c-c--cCceeEEEE
Confidence 4 34444455 67777766665 221 1233333345643 33333 1211 11 0 0 000245888
Q ss_pred eeeecHHHHHHHh
Q psy10030 337 NHYFSLECLQRMV 349 (484)
Q Consensus 337 ~~~~~l~~l~~~~ 349 (484)
.++|+.++|.+..
T Consensus 175 ~y~~~~~~l~~~~ 187 (245)
T 1h7e_A 175 IYAYRRDVLQNYS 187 (245)
T ss_dssp EEEEEHHHHHHGG
T ss_pred EEEcCHHHHHHHH
Confidence 9999998887654
No 33
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=98.73 E-value=1.8e-09 Score=116.69 Aligned_cols=89 Identities=20% Similarity=0.238 Sum_probs=65.5
Q ss_pred CChhHHHHHHHHHHhhhccCCeeeeeecCCcccccCCCCCCccccccHHHHhhhhhhcccccccccc--ccCCCCcccCC
Q psy10030 9 VDASTLGKYRELGLKLISRGDVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQELSGVQLSEV--QVFPPNCLSGV 86 (484)
Q Consensus 9 ~~~~~~~~~~~~g~~~~~~~~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L~ai~~~~~--~p~~~~~~~~~ 86 (484)
.+++++.+|++.|+++|+ ++||++||||||||||.++||++++++++ .++++.++...+..+. .++|+..|.+.
T Consensus 96 ~~~~~~~~~~~~Gl~~i~--kvavvllaGGlGTRLG~~~pK~~lpv~~~--s~ks~lql~~e~i~~~~g~~iPl~IMTS~ 171 (630)
T 3ogz_A 96 RRTAERTALENAGTAMLC--KTVFVLVAGGLGERLGYSSIKVSLPVETA--TNTTYLAYYLRWAQRVGGKEVPFVIMTSD 171 (630)
T ss_dssp CCCHHHHHHHHHHHHHGG--GEEEEEECCCEEGGGTEEEEGGGSBSCTT--TCCBHHHHHHHHHHHHHCTTCCEEEEECT
T ss_pred CCHHHHHHHHHHhHHHHh--hceEEEecCCcccccCCCCCcccceecCC--CCCcHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 367889999999999998 99999999999999999999999999875 3454444443222222 46788888887
Q ss_pred CCCChhhHHHHHHhch
Q psy10030 87 NTVDASTLGKYRELGL 102 (484)
Q Consensus 87 ~~~~~~~~~~~~~~G~ 102 (484)
.+ ..+..+-+++-|+
T Consensus 172 ~T-~~~T~~~~~~fgl 186 (630)
T 3ogz_A 172 DT-HDRTLQLLRELQL 186 (630)
T ss_dssp TT-HHHHHHHHHHTTC
T ss_pred cc-hHHHHHHHHHhCC
Confidence 54 2333344555454
No 34
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.71 E-value=4.3e-08 Score=98.74 Aligned_cols=185 Identities=16% Similarity=0.155 Sum_probs=109.4
Q ss_pred EEEEEEcCCCCccccc---cCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHH
Q psy10030 110 VAVIVLAGGQGTRLGA---DYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFER 186 (484)
Q Consensus 110 vavviLaGG~GTRLG~---~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~ 186 (484)
+.+||||||.||||+. +.||.++|| .|+|++++.++++.. .| +.-+++...+..+.+.+++..
T Consensus 13 ~~aVIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~--------~g---i~~iivv~~~~~~~i~~~~~~ 78 (323)
T 2pa4_A 13 KTVVVPAAGLGTRFLPATKTVPKELLPV---VDTPGIELIAAEAAE--------LG---ATRLAIITAPNKAGVLAHFER 78 (323)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEE---TTEEHHHHHHHHHHH--------TT---CCEEEEEECTTCHHHHHTTSC
T ss_pred eEEEEECCCCccccCccccCCCceeeeE---CCEEHHHHHHHHHHh--------CC---CCEEEEEecCcHHHHHHHHhc
Confidence 6789999999999975 789999999 799999999988863 23 545555556667777776642
Q ss_pred cCC---------------------CCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHH
Q psy10030 187 NGY---------------------FGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTM 245 (484)
Q Consensus 187 ~~~---------------------fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l 245 (484)
... +|+ +|.+..| ..|.|+|+.+...... +
T Consensus 79 ~~~~~~~l~~~~~~~~~~~~~~~~~g~---~i~~~~~---------------------~~~~Gt~~al~~a~~~-----l 129 (323)
T 2pa4_A 79 SSELEETLMERGKTDQVEIIRRAADLI---KAVPVTQ---------------------DKPLGLGHAVGLAESV-----L 129 (323)
T ss_dssp CHHHHHHHHHTTCHHHHHHTTHHHHHC---EEEEEEC---------------------SSCCCHHHHHHTTGGG-----S
T ss_pred cchhhhhhhccchhhhhhhhhccccCc---ceEEEeC---------------------CccCCcHHHHHHHHHH-----h
Confidence 100 111 1222111 1256888877654321 1
Q ss_pred HHcCCeEEEEEeCCCCccc-cCCH-HHHHHHHHcCCceEEEEEEcc-CCCcccceEEEE----CCe-EEEEEeccCCccc
Q psy10030 246 HTRGIKHIHVYCVDNILVK-VGDP-TFLGYCVEQGAHCGVKVVEKI-TPGESLGVLCNV----DGK-HKIVEYSELGNCS 317 (484)
Q Consensus 246 ~~~G~~~i~v~~vDN~l~~-~~Dp-~~lg~~~~~~~~~~~~vv~k~-~~~e~~G~l~~~----~g~-~~vvEyse~~~e~ 317 (484)
..+.++++|+++|+++ . ..+. .++.++.+.++ .++-+.+.. .+....|++... ++. ..|+.+.+-+...
T Consensus 130 -~~~~d~~lv~~~D~~~-~~~~~l~~l~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~ 206 (323)
T 2pa4_A 130 -DDDEDVVAVMLPDDLV-LPTGVMERMAQVRAEFGG-SVLCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIE 206 (323)
T ss_dssp -CSSCCEEEEECTTEEE-ESSCHHHHHHHHHHTTCS-EEEEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEEESCCTT
T ss_pred -cCCCCeEEEEeCCccc-CchHHHHHHHHHHHhcCC-cEEEEEEecccccCCccEEEeCCcccCCCceeEEEEEECCCCc
Confidence 1234569999999997 3 2222 35566655554 333333321 123467877643 332 3455555543210
Q ss_pred ccccccCCCcccccccceeeeeecHHHHHHHh
Q psy10030 318 VFETQDQTGRLKFNLGSICNHYFSLECLQRMV 349 (484)
Q Consensus 318 ~~~~~~~~g~~~f~~~Ni~~~~~~l~~l~~~~ 349 (484)
. . .-...|++.++|+-++++.+.
T Consensus 207 ~-----~----~~~~~~~GiY~~~~~~~~~l~ 229 (323)
T 2pa4_A 207 D-----A----PSRLAATGRYLLDRKIFDALR 229 (323)
T ss_dssp T-----C----SCSEEEEEEEEEETHHHHHHH
T ss_pred c-----c----cccEEEEEEEEECHHHHHHHH
Confidence 1 0 113568889999988765553
No 35
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=98.70 E-value=2.2e-07 Score=90.69 Aligned_cols=180 Identities=13% Similarity=0.101 Sum_probs=107.8
Q ss_pred EEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHH-HHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcC
Q psy10030 110 VAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQA-EKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNG 188 (484)
Q Consensus 110 vavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~-~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~ 188 (484)
..+||||||.||||+ +|.+.++ .|+|++++.+ +++++ .+ +.-+++.++ ++.+.+++++
T Consensus 2 ~~aiIlA~G~stR~~---~K~L~~i---~GkPli~~~i~~~~~~--------~~---~~~vvVvt~--~~~i~~~~~~-- 60 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP---GKPLLLI---HDRPMILRVVDQAKKV--------EG---FDDLCVATD--DERIAEICRA-- 60 (253)
T ss_dssp EEEEEECCSCCTTST---TGGGSEE---TTEEHHHHHHHHHHTC--------TT---CCEEEEEES--CHHHHHHHHT--
T ss_pred eEEEEEeCCCCCCCC---CCceeeE---CCeEhHHHHHHHHHHh--------cC---CCEEEEECC--HHHHHHHHHH--
Confidence 468999999999997 5999999 9999999999 87742 22 444444443 5888888865
Q ss_pred CCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCH
Q psy10030 189 YFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDP 268 (484)
Q Consensus 189 ~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp 268 (484)
||.+ +.+-.| ..+.|++.+..++ +.+...+.++++++++|++|. +|
T Consensus 61 -~g~~---v~~~~~---------------------~~~~Gt~~i~~a~------~~~~~~~~d~vlv~~gD~Pli---~~ 106 (253)
T 4fcu_A 61 -EGVD---VVLTSA---------------------DHPSGTDRLSEVA------RIKGWDADDIIVNVQGDEPLL---PA 106 (253)
T ss_dssp -TTCC---EEECCT---------------------TCCCHHHHHHHHH------HHHTCCTTCEEEECCTTCTTC---CH
T ss_pred -cCCe---EEEeCC---------------------CCCChHHHHHHHH------HhcCcCCCCEEEEEeCCcccC---CH
Confidence 5543 210001 1244554444443 223222568999999999974 45
Q ss_pred HHH----HHHHHc-CCceEEEEEEc------cCCCcccceEEEECCeEEEEEecc--CCcccccccccCCCc--cccccc
Q psy10030 269 TFL----GYCVEQ-GAHCGVKVVEK------ITPGESLGVLCNVDGKHKIVEYSE--LGNCSVFETQDQTGR--LKFNLG 333 (484)
Q Consensus 269 ~~l----g~~~~~-~~~~~~~vv~k------~~~~e~~G~l~~~~g~~~vvEyse--~~~e~~~~~~~~~g~--~~f~~~ 333 (484)
..+ ..+.+. +..+++-+++- .+|.. +++++..+|+. +-+++ +|.. ++....+.. ......
T Consensus 107 ~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~-~kvv~d~~g~~--l~fsr~~ip~~--r~~~~~~~~~~~~~~~~ 181 (253)
T 4fcu_A 107 QLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSI-VKVVMSKQNEA--LYFSRATIPYD--RDGAKRDEPTLHTQAFR 181 (253)
T ss_dssp HHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTS-CEEEECTTSBE--EEEESSCCSCC--TTTSSSSSCCCCSCCEE
T ss_pred HHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCc-cEEEECCCCeE--EEecCCCCCCC--CCcccccccccccceeE
Confidence 544 334444 35666666652 34543 56666556753 33444 3322 111000000 011245
Q ss_pred ceeeeeecHHHHHHHh
Q psy10030 334 SICNHYFSLECLQRMV 349 (484)
Q Consensus 334 Ni~~~~~~l~~l~~~~ 349 (484)
|++.+.|+.++|++..
T Consensus 182 ~~GiY~f~~~~l~~~~ 197 (253)
T 4fcu_A 182 HLGLYAYRVSLLQEYV 197 (253)
T ss_dssp EEEEEEEEHHHHHHHT
T ss_pred EEEEEEeCHHHHHHHH
Confidence 9999999999999876
No 36
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=98.68 E-value=5.6e-09 Score=111.62 Aligned_cols=48 Identities=44% Similarity=0.724 Sum_probs=45.0
Q ss_pred ChhHHHHHHHHHHhhhccCCeeeeeecCCcccccCCCCCCccccccHH
Q psy10030 10 DASTLGKYRELGLKLISRGDVAVIVLAGGQGTRLGADYPNRIESIKIQ 57 (484)
Q Consensus 10 ~~~~~~~~~~~g~~~~~~~~~~~~~~aggqg~~l~~~~pkg~~~i~~~ 57 (484)
+++.+.+|+++|+++|+.||+||++||||||||||.+.||+|++|+++
T Consensus 83 ~~~~~~~~~~~Gl~~i~~~kvavViLAGG~GTRLg~~~PK~l~pv~~~ 130 (505)
T 1jv1_A 83 DQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLP 130 (505)
T ss_dssp TGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGGGCCCCCT
T ss_pred ChHHHHHHHHHhHHhhccCceEEEEEcCCccccCCCCCCCccceeecC
Confidence 567788999999999999999999999999999999999999999764
No 37
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=98.60 E-value=5.3e-07 Score=85.54 Aligned_cols=174 Identities=20% Similarity=0.142 Sum_probs=100.5
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccc-cEEEEeCCCCchHHHHHHHHc
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCL-PWFIMTSELTDRPTREYFERN 187 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~i-pl~iMtS~~t~e~t~~~l~~~ 187 (484)
++.+||||||.||||+ ||.+.|+ .|+|++++.++++.. . + .++|.| .+ +.+.++++++
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~l~~i---~g~pli~~~l~~~~~-----------~-~~~i~v~~-~~--~~i~~~~~~~ 60 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK---EKPLKNL---LGKPLIRWVVEGLVK-----------T-GERVILAT-DS--ERVKEVVEDL 60 (234)
T ss_dssp CEEEEEECCSCCTTTT---TGGGCEE---TTEEHHHHHHHHHHT-----------T-TSCEEEEE-SC--HHHHHHHTTT
T ss_pred ceEEEEEcCCCCCCCC---CCcceeE---CCEEHHHHHHHHHHH-----------h-CCEEEEEC-Ch--HHHHHHHHhc
Confidence 4788999999999998 9999999 899999999888853 2 3 344444 33 6777777541
Q ss_pred CCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCC
Q psy10030 188 GYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGD 267 (484)
Q Consensus 188 ~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~D 267 (484)
. ++ +... ...+.|+++++.++.. .+.++++++++|+++....+
T Consensus 61 ----~---~~--~~~~-------------------~~~~~g~~~~~~~~~~---------~~~~~vlv~~~D~P~~~~~~ 103 (234)
T 2y6p_A 61 ----C---EV--FLTP-------------------SDLPSGSDRVLYVVRD---------LDVDLIINYQGDEPFVYEED 103 (234)
T ss_dssp ----S---EE--EECC-------------------TTCCSHHHHHHHHHTT---------CCCSEEEECCTTCCCCCHHH
T ss_pred ----e---EE--EECC-------------------cccccchHHHHHHHHh---------CCCCEEEEecCCcCcCCHHH
Confidence 1 12 1100 1125677777655432 24689999999998642111
Q ss_pred H-HHHHHHHHcCCceEEEEEEcc----CCCcccceEEEECCeEEEEEeccCCcccccccccCCCcccccccceeeeeecH
Q psy10030 268 P-TFLGYCVEQGAHCGVKVVEKI----TPGESLGVLCNVDGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSL 342 (484)
Q Consensus 268 p-~~lg~~~~~~~~~~~~vv~k~----~~~e~~G~l~~~~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l 342 (484)
- .++..+.+.+ +..+-+.... +| ..++++...+|+ ++.+.+-+....++..+ ... ..|.+.++|+.
T Consensus 104 i~~l~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~g~--v~~~~e~~~~~~~~~~~----~~~-~~~~giy~~~~ 174 (234)
T 2y6p_A 104 IKLIFRELEKGE-RVVTLARKDKEAYERP-EDVKVVLDREGY--ALYFSRSPIPYFRKNDT----FYP-LKHVGIYGFRK 174 (234)
T ss_dssp HHHHHHHHHHTC-SEEEEEEECSGGGGCT-TSCEEEECTTSB--EEEEESSCCSCCSSCCS----SCC-EEEEEEEEEEH
T ss_pred HHHHHHHHHhCC-CeEEEecCCHHHhcCC-CceEEEEcCCCC--EeeeecCCCCccccccc----cee-eEEEEEEEcCH
Confidence 1 2344555555 4433333321 23 234543333554 33444322110011000 111 34889999999
Q ss_pred HHHHHHh
Q psy10030 343 ECLQRMV 349 (484)
Q Consensus 343 ~~l~~~~ 349 (484)
+.+.++.
T Consensus 175 ~~l~~~~ 181 (234)
T 2y6p_A 175 ETLMEFG 181 (234)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887765
No 38
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=98.59 E-value=1.2e-07 Score=96.23 Aligned_cols=184 Identities=16% Similarity=0.172 Sum_probs=106.9
Q ss_pred EEEEEEcCCCCcccc----ccCCCccccccCCCC-CcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHH
Q psy10030 110 VAVIVLAGGQGTRLG----ADYPKGMYNIGLPSG-KSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYF 184 (484)
Q Consensus 110 vavviLaGG~GTRLG----~~~PKg~~~i~l~~~-~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l 184 (484)
+.+||||||.||||+ ...||.++|+ .| +|++++.++++..+ .| . -..+|.|.....+.+.+++
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l---~g~~pli~~~l~~l~~~-------~~-~-~~iivvt~~~~~~~i~~~l 69 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKL---FGNKSLMRWTFERVLEE-------MD-P-KDVIVVTHKDYVERTKKEL 69 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCC---BTTBCHHHHHHHHHHTT-------CC-G-GGEEEEEEGGGHHHHHHHC
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEEC---CCCCcHHHHHHHHHhcc-------CC-C-CcEEEEcChHHHHHHHHHh
Confidence 457899999999997 4589999999 67 99999999888531 12 1 1345555443334555555
Q ss_pred HHcCCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccc
Q psy10030 185 ERNGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVK 264 (484)
Q Consensus 185 ~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~ 264 (484)
.+.. ..++ + .+..|.|+|+........ . ..-++++|++.|.++.
T Consensus 70 ~~~~-----~~~i-----------------i------~e~~~~gta~ai~~a~~~------~-~~~~~~lvl~~D~~~~- 113 (336)
T 2x65_A 70 PELP-----DENI-----------------I------AEPMKKNTAPACFIGTKL------A-DDDEPVLVLPADHRIP- 113 (336)
T ss_dssp TTSC-----GGGE-----------------E------EESSCCCHHHHHHHHHTT------S-CTTCEEEEEETTCBCC-
T ss_pred hccc-----cceE-----------------E------eCCCCCCcHHHHHHHHHh------h-CCCCEEEEEcCCceec-
Confidence 4321 0111 1 122356888766543321 1 2247899999999863
Q ss_pred cCCHH--------HHHHHHHcCCceEEEEEEccCCCcccceEEEEC----CeEEEEEeccCCcccccccccCCCcccccc
Q psy10030 265 VGDPT--------FLGYCVEQGAHCGVKVVEKITPGESLGVLCNVD----GKHKIVEYSELGNCSVFETQDQTGRLKFNL 332 (484)
Q Consensus 265 ~~Dp~--------~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~~----g~~~vvEyse~~~e~~~~~~~~~g~~~f~~ 332 (484)
++. ++.++.+.+..+++-+.+ ..|...+|.+...+ +-..|..+.|-|....++..-..|. .+
T Consensus 114 --~~~~~~~~l~~~~~~~~~~~~~vt~~i~p-~~~~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a~~~~~~g~---y~ 187 (336)
T 2x65_A 114 --DTKKFWKTVKKALDALEKYDGLFTFGIVP-TRPETGYGYIEIGEELEEGVHKVAQFREKPDLETAKKFVESGR---FL 187 (336)
T ss_dssp --CHHHHHHHHHHHHHHHHHHCSEEEEEECC-CSCCSSSEEEEEEEEEETTEEEEEEEEESCCHHHHHHHHHHTC---EE
T ss_pred --cHHHHHHHHHHHHHHHHhcCCeEEEEeec-ccCCCCceEEEECCccCCCccEEEEEEECCChHHHHHHHhcCC---eE
Confidence 332 122344446666665444 44666788886432 1145555666554312111001121 26
Q ss_pred cceeeeeecHHHHHH
Q psy10030 333 GSICNHYFSLECLQR 347 (484)
Q Consensus 333 ~Ni~~~~~~l~~l~~ 347 (484)
.|++.++|+.+.+.+
T Consensus 188 ~n~Giy~~~~~~ll~ 202 (336)
T 2x65_A 188 WNSGMFLWKAREFIE 202 (336)
T ss_dssp EEEEEEEEEHHHHHH
T ss_pred EEeeeEEEEHHHHHH
Confidence 789999999987743
No 39
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=98.58 E-value=3.5e-07 Score=88.90 Aligned_cols=167 Identities=17% Similarity=0.144 Sum_probs=94.8
Q ss_pred CEEEEEEcCCCCcccc---ccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLG---ADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFE 185 (484)
Q Consensus 109 kvavviLaGG~GTRLG---~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~ 185 (484)
++.+||||||.||||+ .+.||.++|+ .|+|++++.++++.. .| +.-+++...+..+.+..+.+
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i---~gkpli~~~l~~l~~--------~g---~~~i~vv~~~~~~~i~~~~~ 90 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQV---NQKPLIEYQIEFLKE--------KG---INDIIIIVGYLKEQFDYLKE 90 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHH--------TT---CCCEEEEECTTGGGGTHHHH
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeE---CCEEHHHHHHHHHHH--------CC---CCeEEEEeCCcHHHHHHHHH
Confidence 5789999999999998 4789999999 899999999988864 23 33333344455666766554
Q ss_pred HcCCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCcccc
Q psy10030 186 RNGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKV 265 (484)
Q Consensus 186 ~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~ 265 (484)
+ +| +.+..+.. +.+.|+++.+...... + +.++|+++|+++..
T Consensus 91 ~---~~-----~~iv~~~~-------------------~~~~g~~~al~~a~~~-----~-----~~~lv~~~D~~~~~- 132 (254)
T 1jyk_A 91 K---YG-----VRLVFNDK-------------------YADYNNFYSLYLVKEE-----L-----ANSYVIDADNYLFK- 132 (254)
T ss_dssp H---HC-----CEEEECTT-------------------TTTSCTHHHHHTTGGG-----C-----TTEEEEETTEEESS-
T ss_pred h---CC-----cEEEECCC-------------------ccCCCcHHHHHHHHHH-----C-----CCEEEEeCCcccCH-
Confidence 3 23 22222211 1245665544432221 1 23789999998743
Q ss_pred CCHHHHHHHHHcCCceEEEEEEccCCCcccceEEEECCeEEEEEeccCCcccccccccCCCcccccccceeeeeecHHHH
Q psy10030 266 GDPTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNVDGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLECL 345 (484)
Q Consensus 266 ~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~l 345 (484)
+. +-.+.+.+..++ +...+|...+|++...+|+ ++.+.+- +. ..+.|++.++|+-+++
T Consensus 133 -~~--~~~~~~~~~~~t---~~~~~~~~~~~v~~d~~g~--v~~~~e~-~~-------------~~~~~~Giy~~~~~~~ 190 (254)
T 1jyk_A 133 -NM--FRNDLTRSTYFS---VYREDCTNEWFLVYGDDYK--VQDIIVD-SK-------------AGRILSGVSFWDAPTA 190 (254)
T ss_dssp -CC--CCSCCCSEEEEE---CEESSCSSCCEEEECTTCB--EEEEECC-CS-------------SEEBCCSEEEECHHHH
T ss_pred -HH--HHHHHhCCceEE---EEcccCCCCeEEEECCCCe--EEEEEEC-CC-------------CCcEEEEEEEEcHHHH
Confidence 21 211122222222 2233454456655333454 3333331 11 1357888889987765
Q ss_pred HHHh
Q psy10030 346 QRMV 349 (484)
Q Consensus 346 ~~~~ 349 (484)
+.+.
T Consensus 191 ~~l~ 194 (254)
T 1jyk_A 191 EKIV 194 (254)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 40
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=98.56 E-value=1.1e-06 Score=85.50 Aligned_cols=184 Identities=16% Similarity=0.094 Sum_probs=105.6
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcC
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNG 188 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~ 188 (484)
++.+||||||.||||+ +|.+.|+ .|+|++++.++++.. .| . -.+++.|. ++.+.+++++
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~l~~~---~gkpli~~~l~~l~~--------~~-~-~~ivvv~~---~~~i~~~~~~-- 60 (262)
T 1vic_A 2 SFTVIIPARFASSRLP---GKPLADI---KGKPMIQHVFEKALQ--------SG-A-SRVIIATD---NENVADVAKS-- 60 (262)
T ss_dssp CCEEEEECCCCCSSST---TGGGCEE---TTEEHHHHHHHHHHH--------TT-C-SEEEEEES---CHHHHHHHHH--
T ss_pred CcEEEEEcCCCCCCCC---CCccccC---CCeEHHHHHHHHHHh--------CC-C-ceEEEECC---cHHHHHHHHh--
Confidence 4678999999999996 5999999 899999999988864 23 2 23455453 3667888875
Q ss_pred CCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCH
Q psy10030 189 YFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDP 268 (484)
Q Consensus 189 ~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp 268 (484)
+|.. ++.+. ...+.|+|.+... +..+...+.++++|+++|+++....+-
T Consensus 61 -~~~~-----~~~~~-------------------~~~~~g~~~~~~~------~~~l~~~~~~~vlv~~~D~P~i~~~~i 109 (262)
T 1vic_A 61 -FGAE-----VCMTS-------------------VNHNSGTERLAEV------VEKLAIPDNEIIVNIQGDEPLIPPVIV 109 (262)
T ss_dssp -TTCE-----EEECC-------------------CSSCCHHHHHHHH------HHHTTCCTTCEEEECCTTCTTCCHHHH
T ss_pred -cCCE-----EEECC-------------------ccccCChHHHHHH------HHHhccCCCCEEEEEeCCcCccCHHHH
Confidence 3422 12211 1124556533222 222222356899999999987432211
Q ss_pred -HHHHHHHHcCCceEEEEEEccCC----CcccceEE-EECCeEEEEEecc--CCcccccccc-------cCCCccccccc
Q psy10030 269 -TFLGYCVEQGAHCGVKVVEKITP----GESLGVLC-NVDGKHKIVEYSE--LGNCSVFETQ-------DQTGRLKFNLG 333 (484)
Q Consensus 269 -~~lg~~~~~~~~~~~~vv~k~~~----~e~~G~l~-~~~g~~~vvEyse--~~~e~~~~~~-------~~~g~~~f~~~ 333 (484)
.++..+.+.++++++-+++..++ ...++.++ ..+|+. +.+++ ++.. ++.. ..+- ......
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v--~~f~~~~~~~~--r~~~~~~~~~~~~~~-p~~~~~ 184 (262)
T 1vic_A 110 RQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLTDKDGYV--LYFSRSVIPYD--RDQFMNLQDVQKVQL-SDAYLR 184 (262)
T ss_dssp HHHHHHHHHHTCSEEEEEEECCCHHHHTCTTSCEEEECTTSBE--EEEESSCSSCC--HHHHTTCSCGGGCCC-CTTCEE
T ss_pred HHHHHHHHhcCCCEEEEEEecCCHHHhcCCCceEEEECCCCCE--eeeecCCCCcC--Ccccccccccccccc-ccceEE
Confidence 24455556678887777776543 11223333 335553 33333 2211 1100 0000 111246
Q ss_pred ceeeeeecHHHHHHHh
Q psy10030 334 SICNHYFSLECLQRMV 349 (484)
Q Consensus 334 Ni~~~~~~l~~l~~~~ 349 (484)
|++.++|+.+++..+.
T Consensus 185 ~~giy~~~~~~l~~~~ 200 (262)
T 1vic_A 185 HIGIYAYRAGFIKQYV 200 (262)
T ss_dssp EEEEEEEEHHHHHHHH
T ss_pred EEEEEEeeHHHHHHHH
Confidence 8999999998887754
No 41
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=98.41 E-value=3.7e-06 Score=79.67 Aligned_cols=130 Identities=13% Similarity=0.122 Sum_probs=79.1
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccc-cEEEEeCCCCchHHHHHHHHc
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCL-PWFIMTSELTDRPTREYFERN 187 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~i-pl~iMtS~~t~e~t~~~l~~~ 187 (484)
++.+||||||.||||+ ||.+.|+ .|+|++++.++++++. + .+ .++|.| . ++.+.+++++
T Consensus 4 ~~~aiIlA~G~g~R~~---~K~l~~i---~gkpll~~~l~~~~~~--------~--~~~~ivvv~-~--~~~i~~~~~~- 63 (228)
T 1ezi_A 4 QNIAVILARQNSKGLP---LKNLRKM---NGISLLGHTINAAISS--------K--CFDRIIVST-D--GGLIAEEAKN- 63 (228)
T ss_dssp EEEEEEECCSSCSSST---TTTTCEE---TTEEHHHHHHHHHHHH--------C--CCSEEEEEE-S--CHHHHHHHHH-
T ss_pred ceEEEEecCCCCCCCC---Cccccee---CCcCHHHHHHHHHHhC--------C--CCCEEEEEC-C--CHHHHHHHHH-
Confidence 4789999999999998 9999999 8999999999988642 2 13 344545 3 4667778765
Q ss_pred CCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCC
Q psy10030 188 GYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGD 267 (484)
Q Consensus 188 ~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~D 267 (484)
+|.. + +.+.. . . +.|..|...++... ++.+ ....++++++++|+++. +
T Consensus 64 --~~~~---~--~~~~~----------------~--~-~~~~~g~~~sv~~~--l~~~-~~~~d~vlv~~~D~P~~---~ 111 (228)
T 1ezi_A 64 --FGVE---V--VLRPA----------------E--L-ASDTASSISGVIHA--LETI-GSNSGTVTLLQPTSPLR---T 111 (228)
T ss_dssp --TTCE---E--EECCC-------------------------CHHHHHHHHH--HHHH-TCCSEEEEECCTTCTTC---C
T ss_pred --cCCE---E--EeCch----------------H--H-cCCCCChHHHHHHH--HHHh-CCCCCEEEEEcCCCCcC---C
Confidence 3432 2 21110 0 0 11222222222211 1222 23468999999999973 5
Q ss_pred HHHHHHHHH----cCCceEEEEEEccC
Q psy10030 268 PTFLGYCVE----QGAHCGVKVVEKIT 290 (484)
Q Consensus 268 p~~lg~~~~----~~~~~~~~vv~k~~ 290 (484)
+..+.-.++ .++++++-+++..+
T Consensus 112 ~~~i~~l~~~~~~~~~~~~~~~~~~~~ 138 (228)
T 1ezi_A 112 GAHIREAFSLFDEKIKGSVVSACPMEH 138 (228)
T ss_dssp HHHHHHHHTTCCTTTCCCEEEEEECSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEEecCC
Confidence 555544433 35677777777664
No 42
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=98.40 E-value=2.1e-06 Score=81.84 Aligned_cols=132 Identities=16% Similarity=0.150 Sum_probs=80.6
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcC
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNG 188 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~ 188 (484)
++.+||||||.||||+ +|.+.|+ .|+|++++.++++++. + .--.+++.| .++.+.+++++
T Consensus 3 ~~~aiIlA~G~s~R~~---~K~l~~i---~Gkpli~~~i~~~~~~--------~-~~~~ivv~~---~~~~i~~~~~~-- 62 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP---LKNIKRL---AGVPLIGWVLRAALDA--------G-VFQSVWVST---DHDEIENVAKQ-- 62 (229)
T ss_dssp CEEEEEECCSCCSSSS---CTTTSEE---TTEEHHHHHHHHHHHH--------T-CCSEEEEEE---SCHHHHHHHHH--
T ss_pred cEEEEEEcCCCCCCCC---CcccceE---CCEEHHHHHHHHHHhC--------C-CcCEEEEEC---ChHHHHHHHHH--
Confidence 5789999999999996 5999999 8999999999988642 2 111344444 35778888876
Q ss_pred CCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCH
Q psy10030 189 YFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGDP 268 (484)
Q Consensus 189 ~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp 268 (484)
+|.. ++.+..- .....+.|++.+..++.. + .+.++++++++|+++. ++
T Consensus 63 -~g~~-----~~~~~~~---------------~~~~~~~~~~~v~~al~~------~--~~~d~vlv~~~D~Pli---~~ 110 (229)
T 1qwj_A 63 -FGAQ-----VHRRSSE---------------TSKDSSTSLDAIVEFLNY------H--NEVDIVGNIQATSPCL---HP 110 (229)
T ss_dssp -TTCE-----EEECCGG---------------GSSTTCCHHHHHHHHHTT------C--TTCSEEEEECTTCTTC---CH
T ss_pred -cCCE-----EEeChhh---------------hcCCCCcHHHHHHHHHHh------c--CCCCEEEEecCCCCcC---CH
Confidence 3532 2322210 000011222333443322 1 2568999999999974 44
Q ss_pred HH----HHHHHHcCCceEEEEEEccCCC
Q psy10030 269 TF----LGYCVEQGAHCGVKVVEKITPG 292 (484)
Q Consensus 269 ~~----lg~~~~~~~~~~~~vv~k~~~~ 292 (484)
.. +..+...+++..+.+++..+|.
T Consensus 111 ~~i~~l~~~~~~~~~~~~~~~~~~~~p~ 138 (229)
T 1qwj_A 111 TDLQKVAEMIREEGYDSVFSVVRRHQFR 138 (229)
T ss_dssp HHHHHHHHHHHSSCCSEEEEEEEECCCE
T ss_pred HHHHHHHHHHHhCCCCEEEEEeeccChh
Confidence 43 4444456777666565444453
No 43
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=98.38 E-value=8.1e-07 Score=90.22 Aligned_cols=183 Identities=17% Similarity=0.155 Sum_probs=103.7
Q ss_pred EEEEEEcCCCCcccc----ccCCCccccccCCCC-CcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHH
Q psy10030 110 VAVIVLAGGQGTRLG----ADYPKGMYNIGLPSG-KSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYF 184 (484)
Q Consensus 110 vavviLaGG~GTRLG----~~~PKg~~~i~l~~~-~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l 184 (484)
+.+||||||.||||. ...||.++|+ .| +|++++.++++..+ .| . -..+|.|.....+.+.++
T Consensus 3 m~~VILAgG~GtRl~Pls~~~~pK~ll~l---~G~~pli~~~l~~l~~~-------~~-~-~~iiVvt~~~~~~~i~~~- 69 (337)
T 2cu2_A 3 TYALVMAGGRGERLWPLSREDRPKPFLPL---FEGKTLLEATLERLAPL-------VP-P-ERTLLAVRRDQEAVARPY- 69 (337)
T ss_dssp EEEEEECCCCCGGGTTTCBTTBCGGGCBC---GGGCBHHHHHHHHHTTT-------SC-G-GGEEEEEEGGGHHHHGGG-
T ss_pred eEEEEEcCCCcccCCccCCCCCCceEEEc---CCCChHHHHHHHHHhCc-------CC-C-CCEEEEcChHHHHHHHHH-
Confidence 678999999999996 4679999999 67 99999999888532 02 1 134455543222233222
Q ss_pred HHcCCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccc
Q psy10030 185 ERNGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVK 264 (484)
Q Consensus 185 ~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~ 264 (484)
++ ...+ .++..|.|+|........ +.. ..+-++++|++.|.++
T Consensus 70 -----l~--~~~~-----------------------i~e~~~~gta~ai~~a~~---l~~--~~~~~~~lvl~~D~~~-- 112 (337)
T 2cu2_A 70 -----AD--GIRL-----------------------LLEPLGRDTAGAVLLGVA---EAL--KEGAERLLVLPADHYV-- 112 (337)
T ss_dssp -----CS--SSEE-----------------------EEESSCCHHHHHHHHHHH---HHH--HHTCSEEEEEESSCEE--
T ss_pred -----hc--cCce-----------------------EecCCCCCcHHHHHHHHH---Hhc--cCCCCEEEEEECCccC--
Confidence 22 0011 112235677776554332 211 1236789999999986
Q ss_pred cCCHHH----HHHHH---HcCCceEEEEEEccCCCcccceEEEEC---CeEEEEEeccCCcccccccccCCCcccccccc
Q psy10030 265 VGDPTF----LGYCV---EQGAHCGVKVVEKITPGESLGVLCNVD---GKHKIVEYSELGNCSVFETQDQTGRLKFNLGS 334 (484)
Q Consensus 265 ~~Dp~~----lg~~~---~~~~~~~~~vv~k~~~~e~~G~l~~~~---g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~N 334 (484)
.++.. +..+. ..+..+++-+.+.. |...+|.+...+ +-..|..+.|-|....++..-..| ...|
T Consensus 113 -~~~~~~~~~l~~~~~~~~~~~~vt~~i~p~~-~~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~~~~~g----~~~n 186 (337)
T 2cu2_A 113 -GDDEAYREALATMLEAAEEGFVVALGLRPTR-PETEYGYIRLGPREGAWYRGEGFVEKPSYAEALEYIRKG----YVWN 186 (337)
T ss_dssp -SCHHHHHHHHHHHHHHCCTTCEEEEEECCSS-CCSSSCEEEEEEEETTEEEEEEEECCCCHHHHHHHHHTT----CEEE
T ss_pred -CCHHHHHHHHHHHHHHHHcCCeEEEeeccCC-CCCCceEEEECCcccccCeEEEEEeCCChHHHHHHhhcC----CEEE
Confidence 34432 22111 23555655555543 666789886432 114566666655431211100112 2678
Q ss_pred eeeeeecHHHH-HHH
Q psy10030 335 ICNHYFSLECL-QRM 348 (484)
Q Consensus 335 i~~~~~~l~~l-~~~ 348 (484)
.+.++|+.+.+ +.+
T Consensus 187 ~Giy~f~~~~ll~~l 201 (337)
T 2cu2_A 187 GGVFAFAPATMAELF 201 (337)
T ss_dssp EEEEEECHHHHHHHH
T ss_pred EEEEEEeHHHHHHHH
Confidence 99999999876 444
No 44
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=98.36 E-value=2.1e-06 Score=79.04 Aligned_cols=113 Identities=21% Similarity=0.194 Sum_probs=71.2
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcC
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNG 188 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~ 188 (484)
++.+||||||.||||| .||.+.++ .|+|++++.++++.. .+ +.-+++.+.+..+.+.+++++
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~---~g~pli~~~l~~l~~--------~~---~~~i~vv~~~~~~~~~~~~~~-- 66 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG--TPKQLLPL---GDTTLLGATLAMARR--------CP---FDQLIVTLGGAADEVLEKVEL-- 66 (199)
T ss_dssp CEEEEEEESSCCTTTT--SCGGGCEE---TTEEHHHHHHHHHHT--------SS---CSEEEEEECTTHHHHHHHSCC--
T ss_pred ceEEEEECCCCCCCCC--CCEEeCEe---CccCHHHHHHHHHHh--------CC---CCcEEEEeCCCHHHHHHHhcc--
Confidence 5889999999999998 79999999 899999999888853 22 433444444445566555533
Q ss_pred CCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCc-hHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCC
Q psy10030 189 YFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHG-GLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGD 267 (484)
Q Consensus 189 ~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~G-gi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~D 267 (484)
+|+. + +.+. ..+.|.+ +++.++... ..+.++++|+++|.++. +
T Consensus 67 -~~~~---~--~~~~--------------------~~~~g~~~~i~~al~~~-------~~~~~~vlv~~~D~P~~---~ 110 (199)
T 2waw_A 67 -DGLD---I--VLVD--------------------DAGLGCSSSLKSALTWV-------DPTAEGIVLMLGDQPGI---T 110 (199)
T ss_dssp -TTSE---E--EECC--------------------CCCTTCCCHHHHHHHTS-------CTTCSEEEEEETTCTTC---C
T ss_pred -CCCE---E--EECC--------------------CcccCHHHHHHHHHHhh-------hccCCeEEEEeCCcccC---C
Confidence 3321 2 1110 1124533 445444321 12578999999999963 4
Q ss_pred HHHHHHHH
Q psy10030 268 PTFLGYCV 275 (484)
Q Consensus 268 p~~lg~~~ 275 (484)
+..+....
T Consensus 111 ~~~i~~l~ 118 (199)
T 2waw_A 111 ASAVASLI 118 (199)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55554443
No 45
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=98.35 E-value=5.4e-06 Score=85.12 Aligned_cols=166 Identities=19% Similarity=0.208 Sum_probs=102.0
Q ss_pred EEEEEcCCCCcccc---ccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHc
Q psy10030 111 AVIVLAGGQGTRLG---ADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERN 187 (484)
Q Consensus 111 avviLaGG~GTRLG---~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~ 187 (484)
.+|+||||.||||+ ...||.++|+ .|+|++++.++++.+ .| +.-+++...+. +.+++++.
T Consensus 2 ~aiIlA~G~g~R~~plt~~~~K~ll~i---~g~pli~~~l~~l~~--------~~---~~~i~vv~~~~---i~~~~~~~ 64 (401)
T 2ggo_A 2 KAFILAAGSGERLEPITHTRPKAFVPI---LSKPLIEYQIEYLRK--------CG---IRDITVIVSSK---NKEYFEKK 64 (401)
T ss_dssp EEEEECCCCCGGGTTGGGTSCGGGCEE---TTEEHHHHHHHHHHH--------TT---CCEEEEEECGG---GHHHHHHH
T ss_pred eEEEEcCcCccccCcccCCCCcceeeE---CCEeHHHHHHHHHHH--------CC---CCEEEEEeCHH---HHHHhhcc
Confidence 47999999999997 3689999999 899999999998864 23 44344333332 77788764
Q ss_pred CCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCC
Q psy10030 188 GYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGD 267 (484)
Q Consensus 188 ~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~D 267 (484)
.. .+.+..+.. .|.|.++.+....+ .++++|.+.|.++. +
T Consensus 65 ~~------~i~~~~~~~--------------------~~~g~~~~l~~~~~-----------~~~~lv~~~D~~~~---~ 104 (401)
T 2ggo_A 65 LK------EISIVTQKD--------------------DIKGTGAAILSAKF-----------NDEALIIYGDLFFS---N 104 (401)
T ss_dssp CT------TCEEEECCT--------------------TCCBSTTTGGGCCC-----------SSEEEEEETTEEES---C
T ss_pred CC------cEEEEeCCC--------------------CCCChHHHHHHhcc-----------CCCEEEEeCccccc---c
Confidence 21 232222110 14566655543321 47889999999852 3
Q ss_pred HHHHHHHHHcCCceEEEEEEccCCCcccceEEEE-CCeEEEEEeccCCcccccccccCCCcccccccceeeeeecHHHHH
Q psy10030 268 PTFLGYCVEQGAHCGVKVVEKITPGESLGVLCNV-DGKHKIVEYSELGNCSVFETQDQTGRLKFNLGSICNHYFSLECLQ 346 (484)
Q Consensus 268 p~~lg~~~~~~~~~~~~vv~k~~~~e~~G~l~~~-~g~~~vvEyse~~~e~~~~~~~~~g~~~f~~~Ni~~~~~~l~~l~ 346 (484)
+..+..+.+ ..+.++-+.+..++ .+.|.+... +|+ +.++.+-+.. - .....|++.++|+-+.++
T Consensus 105 ~~~~~~l~~-~~~~~i~~~~~~~~-~~~~~v~~~~~g~--v~~~~ek~~~-~----------~~~~~~~Giy~~~~~~~~ 169 (401)
T 2ggo_A 105 EKEICNIIT-LKENAIIGVKVSNP-KDYGVLVLDNQNN--LSKIIEKPEI-P----------PSNLINAGIYKLNSDIFT 169 (401)
T ss_dssp SHHHHHHTT-CSSEEEEEEECSCC-SSSCEEEECTTSS--EEEEECSCSS-C----------SCSEEEEEEEEEETHHHH
T ss_pred HHHHHHHHH-hcCCEEEEEEcCCC-cceeEEEECCCCe--EEEEEECCCC-C----------CCcEEEEEEEEEcHHHHH
Confidence 455555544 56676666665544 356776644 343 3444432221 0 113567778889988775
Q ss_pred HH
Q psy10030 347 RM 348 (484)
Q Consensus 347 ~~ 348 (484)
.+
T Consensus 170 ~l 171 (401)
T 2ggo_A 170 YL 171 (401)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 46
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=98.32 E-value=2.6e-06 Score=82.16 Aligned_cols=66 Identities=23% Similarity=0.332 Sum_probs=42.9
Q ss_pred CEEEEEEcCCCCccccc-cCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCcccc-EEEEeCCCCchHHHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGA-DYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLP-WFIMTSELTDRPTREYFER 186 (484)
Q Consensus 109 kvavviLaGG~GTRLG~-~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ip-l~iMtS~~t~e~t~~~l~~ 186 (484)
++.+||||||.|||||. +.||.++++ .|+|++++.++.+.. .+ .+. ++|.++....+.+.+.+++
T Consensus 3 ~~~aIIlAaG~g~Rm~~~~~pK~l~~l---~Gkpll~~~l~~~~~--------~~--~~~~ivvv~~~~~~~~~~~~~~~ 69 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGNVSMPKQFLPL---NGKPIIVHTVEKFIL--------NT--RFDKILISSPKEWMNHAEDNIKK 69 (246)
T ss_dssp CEEEEEECC-----C-CSSCCGGGSEE---TTEEHHHHHHHHHHT--------CT--TCSEEEEEECGGGHHHHHHHHHH
T ss_pred ccEEEEECCccccccCCCCCCCeEEEE---CCeeHHHHHHHHHHc--------CC--CCCEEEEEeCHHHHHHHHHHHHH
Confidence 57899999999999998 889999999 899999999888753 11 143 4455544433346666666
Q ss_pred c
Q psy10030 187 N 187 (484)
Q Consensus 187 ~ 187 (484)
+
T Consensus 70 ~ 70 (246)
T 3f1c_A 70 Y 70 (246)
T ss_dssp H
T ss_pred h
Confidence 4
No 47
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=98.31 E-value=2.9e-06 Score=80.35 Aligned_cols=64 Identities=19% Similarity=0.295 Sum_probs=39.1
Q ss_pred EEEEEEcCCCCccccc-cCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccc-cEEEEeCCCCchHHHHHHHH
Q psy10030 110 VAVIVLAGGQGTRLGA-DYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCL-PWFIMTSELTDRPTREYFER 186 (484)
Q Consensus 110 vavviLaGG~GTRLG~-~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~i-pl~iMtS~~t~e~t~~~l~~ 186 (484)
+.+||||||.|||||. +.||.++|+ .|+|++++.++++.. .+ .+ .++|.|.....+.+.+++++
T Consensus 3 ~~~iIlA~G~g~R~~~~~~~K~l~~i---~g~pli~~~l~~l~~--------~~--~~~~i~vv~~~~~~~~~~~~~~~ 68 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGISNLPKQFLEL---GDRPILIHTIEKFVL--------EP--SIEKIVVGVHGDWVSHAEDLVDK 68 (236)
T ss_dssp EEEEEEEC-----------CGGGSEE---TTEEHHHHHHHHHHT--------CT--TCCCEEEEECGGGHHHHHHHHHH
T ss_pred eEEEEeCCccccccCCCCCCCeeeee---CCccHHHHHHHHHHc--------CC--CCCeEEEEeCHHHHHHHHHHHHh
Confidence 6789999999999996 679999999 799999999888753 11 13 34555544333667888765
No 48
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=98.30 E-value=2.7e-06 Score=78.22 Aligned_cols=114 Identities=21% Similarity=0.241 Sum_probs=69.9
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcC
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNG 188 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~ 188 (484)
++.+||||||.||||| .||.++|+ .|+|++++.++++.. .+ +.-+++.+.+..+.+.+++.+
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~---~g~pll~~~l~~l~~--------~~---~~~i~vv~~~~~~~~~~~~~~-- 66 (197)
T 2wee_A 5 QITGVVLAAGRSNRLG--TPKQLLPY---RDTTVLGATLDVARQ--------AG---FDQLILTLGGAASAVRAAMAL-- 66 (197)
T ss_dssp EEEEEEEECCCCTTTS--SCGGGSEE---TTEEHHHHHHHHHHH--------TT---CSEEEEEECTTHHHHHHHSCC--
T ss_pred ceEEEEECCCCcccCC--CCeEcCee---CCccHHHHHHHHHHh--------cC---CCcEEEEeCCCHHHHHHHhcc--
Confidence 5789999999999997 79999999 899999999888864 22 433344444445566555532
Q ss_pred CCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCch-HhHHHhhcChHHHHHHcCCeEEEEEeCCCCccccCC
Q psy10030 189 YFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGG-LYHALGATGILDTMHTRGIKHIHVYCVDNILVKVGD 267 (484)
Q Consensus 189 ~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Gg-i~~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~D 267 (484)
+|+. + +.+. ..+.|.++ ++.++... ..+.++++|+.+|.++ .+
T Consensus 67 -~~~~---~--~~~~--------------------~~~~g~~~~i~~al~~~-------~~~~~~vlv~~~D~P~---~~ 110 (197)
T 2wee_A 67 -DGTD---V--VVVE--------------------DVERGCAASLRVALARV-------HPRATGIVLMLGDQPQ---VA 110 (197)
T ss_dssp -TTSE---E--EECC------------------------CCHHHHHHHHTTS-------CTTEEEEEEEETTCTT---CC
T ss_pred -CCCE---E--EECC--------------------CcccCHHHHHHHHHHHh-------cccCCeEEEEeCCcCC---CC
Confidence 2321 1 1110 01235444 33333221 1246899999999986 35
Q ss_pred HHHHHHHHH
Q psy10030 268 PTFLGYCVE 276 (484)
Q Consensus 268 p~~lg~~~~ 276 (484)
+..+....+
T Consensus 111 ~~~i~~l~~ 119 (197)
T 2wee_A 111 PATLRRIID 119 (197)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 665554443
No 49
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=98.30 E-value=3e-06 Score=79.64 Aligned_cols=41 Identities=27% Similarity=0.461 Sum_probs=37.1
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDK 152 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~ 152 (484)
++.+||||||.||||+.+.||.++|+ .|+|++++.++++..
T Consensus 2 ~~~~vIlA~G~g~R~~~~~~K~l~~~---~g~pli~~~l~~l~~ 42 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLRAGRPKAFVTL---GGTPLLEHALSGLRA 42 (223)
T ss_dssp CEEEEEECCCCCGGGTSSSCGGGSEE---TTEEHHHHHHHHHHH
T ss_pred ceEEEEECCccCcccCCCCCCeeeEE---CCeEHHHHHHHHHhc
Confidence 47899999999999997789999999 799999999988864
No 50
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=98.27 E-value=1.4e-06 Score=80.61 Aligned_cols=127 Identities=17% Similarity=0.271 Sum_probs=73.8
Q ss_pred EEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHcCC
Q psy10030 110 VAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERNGY 189 (484)
Q Consensus 110 vavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~~~ 189 (484)
+.+||||||.|||||. .||.+.|+ .|+|++++.+++++. .+ +.-+++...+.++.+.+++++.
T Consensus 1 m~aiIlA~G~s~R~~~-~~K~l~~~---~g~pli~~~l~~l~~--------~~---~~~v~vv~~~~~~~i~~~~~~~-- 63 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG-VEKPLIKL---CGRCLIDYVVSPLLK--------SK---VNNIFIATSPNTPKTKEYINSA-- 63 (196)
T ss_dssp CEEEEEC----CGGGG-SCGGGCEE---TTEEHHHHHHHHHHS--------SS---CCCEEEECCTTCHHHHHHHHHH--
T ss_pred CEEEEECCCCCCcCCC-CCccEEEE---CCEEHHHHHHHHHHH--------CC---CCEEEEEeCCChHHHHHHHHhh--
Confidence 3579999999999987 89999999 899999999998853 22 4444444455578899999874
Q ss_pred CCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCCchHh-HHHhhcChHHHHHHcCCeEEEEEeCCCCccccCCH
Q psy10030 190 FGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGHGGLY-HALGATGILDTMHTRGIKHIHVYCVDNILVKVGDP 268 (484)
Q Consensus 190 fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~-~~L~~~G~l~~l~~~G~~~i~v~~vDN~l~~~~Dp 268 (484)
++.. ..+.++. ....|.++.+ .++.. . .++++++++|.++. ++
T Consensus 64 ~~~~-~~~~~~~----------------------~~~~g~~~si~~al~~---------~-~~~vlv~~~D~P~i---~~ 107 (196)
T 3rsb_A 64 YKDY-KNIVVID----------------------TSGKGYIEDLNECIGY---------F-SEPFLVVSSDLINL---KS 107 (196)
T ss_dssp TTTT-TEEEE------------------------------CCCCCTTTTT---------C-SSCEEEEETTEESC---CH
T ss_pred ccCC-CCEEEEE----------------------CCCCCcHHHHHHHHHh---------C-CCCEEEEeCCcccC---CH
Confidence 2221 1232111 1123443333 32221 1 57899999999874 34
Q ss_pred HH----HHHHHH-----cCCceEEEEEEcc
Q psy10030 269 TF----LGYCVE-----QGAHCGVKVVEKI 289 (484)
Q Consensus 269 ~~----lg~~~~-----~~~~~~~~vv~k~ 289 (484)
.. +..+.+ .+.+..+-+++..
T Consensus 108 ~~i~~l~~~~~~~~~~~~~~~~~~~~~p~~ 137 (196)
T 3rsb_A 108 KIINSIVDYFYCIKAKTPDVEALAVMIPKE 137 (196)
T ss_dssp HHHHHHHHHHHHHHTTCC--CEEEEEEETT
T ss_pred HHHHHHHHHHHhhhcccCCCceEEEEEEcc
Confidence 43 344444 4566667677665
No 51
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=98.25 E-value=9e-06 Score=77.25 Aligned_cols=60 Identities=23% Similarity=0.357 Sum_probs=39.9
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFE 185 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~ 185 (484)
++.+|+||||.|||||.. ||.++|+ .|+|++++.++++.. . +.-+++.. +.++.+.+++.
T Consensus 18 ~~~~iIlA~G~g~R~~~~-~K~l~~i---~g~pli~~~l~~l~~-----------~-~~~i~vv~-~~~~~~~~~~~ 77 (232)
T 2xme_A 18 LMKAVILAAGLGTRLGGV-PKPLVRV---GGCEIILRTMKLLSP-----------H-VSEFIIVA-SRYADDIDAFL 77 (232)
T ss_dssp CEEEEEEECC------CC-CGGGCEE---TTEEHHHHHHHHHGG-----------G-EEEEEEEE-STTHHHHHHHH
T ss_pred cceEEEECCcCcCcCCCC-CcEEeEE---CCEEHHHHHHHHHHH-----------h-CCEEEEEe-CChHHHHHHHH
Confidence 588999999999999754 9999999 899999999887753 2 33333344 56667777664
No 52
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=98.24 E-value=7.3e-06 Score=77.45 Aligned_cols=66 Identities=18% Similarity=0.288 Sum_probs=40.6
Q ss_pred CCEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHHHHc
Q psy10030 108 GDVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYFERN 187 (484)
Q Consensus 108 gkvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l~~~ 187 (484)
.++.+||||||.|||||.+.||.++++ .|+|++++.++++... + .+.-+++.+.+.++.+.+ +.++
T Consensus 5 ~~~~aiIlA~G~g~R~~~~~~K~l~~~---~gkpli~~~l~~l~~~--------~--~~~~ivvv~~~~~~~~~~-~~~~ 70 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGADKPKQYVEI---GSKTVLEHVLGIFERH--------E--AVDLTVVVVSPEDTFADK-VQTA 70 (231)
T ss_dssp CCEEEEEECC----------CCSCCEE---TTEEHHHHHHHHHHTC--------T--TCCEEEEECCTTCSTHHH-HHHH
T ss_pred CceEEEEEcccccccCCCCCCceEeEE---CCeEHHHHHHHHHHcC--------C--CCCeEEEEECccHHHHHH-HHhc
Confidence 368899999999999997789999999 7999999999888631 1 144455555555566766 6553
No 53
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=98.24 E-value=3.9e-06 Score=80.69 Aligned_cols=128 Identities=21% Similarity=0.311 Sum_probs=81.5
Q ss_pred CCEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCcccc-EEEEeCCCCchHHHHHHHH
Q psy10030 108 GDVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLP-WFIMTSELTDRPTREYFER 186 (484)
Q Consensus 108 gkvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ip-l~iMtS~~t~e~t~~~l~~ 186 (484)
+++++||||||.|||||.+.||.+.++ .|+|++++.++.+++. + .+. .++.++....+.+.+++..
T Consensus 6 ~~~~aIIlAaG~g~Rmg~~~~K~l~~l---~Gkpll~~~l~~~~~~--------~--~~~~ivVv~~~~~~~~~~~~~~~ 72 (231)
T 3q80_A 6 GEVVAIVPAAGSGERLAVGVPKAFYQL---DGQTLIERAVDGLLDS--------G--VVDTVVVAVPADRTDEARQILGH 72 (231)
T ss_dssp CCEEEEEECCCCCTTTCSSSCGGGCEE---TTEEHHHHHHHHHHHT--------S--CCCEEEEEECGGGHHHHHHHHGG
T ss_pred CceEEEEECCCCCccCCCCCCceEEEE---CCeEHHHHHHHHHHhC--------C--CCCeEEEECChHHHHHHHHHhcC
Confidence 368999999999999999899999999 8999999999988641 1 133 4454544333555555432
Q ss_pred cCCCCCCCCcEEEEEcCCccccccCCcccccCCCcceeccCCC---chHhHHHhhcChHHHHHH-cCCeEEEEEeCCCCc
Q psy10030 187 NGYFGLDPAHVIFFKQRSMPCFSLSGEILLETRDRVARSPDGH---GGLYHALGATGILDTMHT-RGIKHIHVYCVDNIL 262 (484)
Q Consensus 187 ~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~---Ggi~~~L~~~G~l~~l~~-~G~~~i~v~~vDN~l 262 (484)
.+. ..+.|. .+++.+|... .. ...++++|+.+|.++
T Consensus 73 ---------~v~-------------------------~v~gg~~r~~sv~~gl~~~------~~~~~~d~Vlv~~~d~Pl 112 (231)
T 3q80_A 73 ---------RAM-------------------------IVAGGSNRTDTVNLALTVL------SGTAEPEFVLVHDAARAL 112 (231)
T ss_dssp ---------GCE-------------------------EEECCSSHHHHHHHHHGGG------C---CCSEEEECCTTCTT
T ss_pred ---------CeE-------------------------EEcCCCchHHHHHHHHHHh------hhcCCCCEEEEEcCCcCC
Confidence 111 112232 2344444321 11 135899999999997
Q ss_pred cccCCHHHHHHHHH---cCCceEEEEEEccCC
Q psy10030 263 VKVGDPTFLGYCVE---QGAHCGVKVVEKITP 291 (484)
Q Consensus 263 ~~~~Dp~~lg~~~~---~~~~~~~~vv~k~~~ 291 (484)
..|..+..+++ .+.+.++-+++-.++
T Consensus 113 ---i~~~~i~~li~~~~~~~~~~i~~~p~~dt 141 (231)
T 3q80_A 113 ---TPPALVARVVEALRDGYAAVVPVLPLSDT 141 (231)
T ss_dssp ---CCHHHHHHHHHHHHTTCSEEEEEECCSSC
T ss_pred ---CCHHHHHHHHHHHhhcCCeEEEEEeccCC
Confidence 45766655433 236777777766544
No 54
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=98.18 E-value=3.7e-06 Score=79.76 Aligned_cols=41 Identities=32% Similarity=0.544 Sum_probs=37.3
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDK 152 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~ 152 (484)
.+.+||||||.|||||.+.||.+.|+ .|+|++++.+++++.
T Consensus 13 ~~~aiILAaG~s~Rm~~~~~K~l~~i---~Gkpli~~~i~~l~~ 53 (234)
T 1vpa_A 13 MNVAILLAAGKGERMSENVPKQFLEI---EGRMLFEYPLSTFLK 53 (234)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGCEE---TTEETTHHHHHHHHH
T ss_pred cCeEEEEcCcchhhcCCCCCceEEEE---CCeEHHHHHHHHHHc
Confidence 57899999999999997789999999 899999999988864
No 55
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.18 E-value=2.5e-07 Score=97.56 Aligned_cols=92 Identities=22% Similarity=0.268 Sum_probs=63.4
Q ss_pred HHHhhhccCCeeeeeecCCcccccCCCCCCccccccHHHHhhhhhhcccccccccc-----ccCCCCcccCCCCCChhhH
Q psy10030 20 LGLKLISRGDVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQELSGVQLSEV-----QVFPPNCLSGVNTVDASTL 94 (484)
Q Consensus 20 ~g~~~~~~~~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L~ai~~~~~-----~p~~~~~~~~~~~~~~~~~ 94 (484)
.|+++|+ ||||++||||||||||.++|||++++. .++++.++...+...+ .++|+..|.|..+. .+..
T Consensus 69 ~G~~~L~--kvavvlLaGGlGTRLG~~~pKg~~~v~----sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T~-~~T~ 141 (484)
T 3gue_A 69 ENTALLR--QAVVLKLNGGLGTGMGLNGPKSLLQVK----NGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFSTS-GETK 141 (484)
T ss_dssp CCHHHHT--TEEEEEEECCCCGGGTCSSCGGGSEEE----TTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTH-HHHH
T ss_pred HHHHHHh--hcEEEEEcCCcccccCCCCCceeeecC----CCCcHHHHHHHHHHHHHHHcCCCceEEEECCcchh-HHHH
Confidence 5888998 899999999999999999999999996 3555555544333332 46788888887542 2222
Q ss_pred HHHH---Hhch-----hcccCCCEEEEEEcCC
Q psy10030 95 GKYR---ELGL-----KLISRGDVAVIVLAGG 118 (484)
Q Consensus 95 ~~~~---~~G~-----~~i~~gkvavviLaGG 118 (484)
+-++ .-|+ ..+.|+++.++-..|+
T Consensus 142 ~~~~k~~~Fgl~~~~v~~F~Q~~~P~i~~dg~ 173 (484)
T 3gue_A 142 NFLRKYPTLYEVFDSDIELMQNRVPKIRQDNF 173 (484)
T ss_dssp HHGGGCHHHHTTCCCCCEEECCCEECEETTTC
T ss_pred HHHHhCcccCCCccceEEEEeCceeeEecCCC
Confidence 2222 2243 3456788888777665
No 56
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.14 E-value=1.4e-07 Score=100.31 Aligned_cols=73 Identities=18% Similarity=0.252 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHhhhccCCeeeeeecCCcccccCCCCCCccccccHHHHhhhhhhcccccccccc-----ccCCCCcccCC
Q psy10030 12 STLGKYRELGLKLISRGDVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQELSGVQLSEV-----QVFPPNCLSGV 86 (484)
Q Consensus 12 ~~~~~~~~~g~~~~~~~~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L~ai~~~~~-----~p~~~~~~~~~ 86 (484)
+.+..|++.+...++.+||||++||||||||||.++|||++++. .++++.++.+.+...+ .++|+..|.+.
T Consensus 110 ~~l~~~~~~~~~~~~l~kvavvlLaGGlGTRLG~~~PK~~i~V~----sgktflql~~eqI~~l~~~~g~~IPl~IMTS~ 185 (528)
T 3r3i_A 110 EKIKARGLPDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIGVR----NENTFLDLTVQQIEHLNKTYNTDVPLVLMNSF 185 (528)
T ss_dssp HHHTTSCCCCSSCTTCTTEEEEEECCCBCTTTTCSSBGGGSEEE----TTEEHHHHHHHHHHHHHHHHTCCCCEEEEECT
T ss_pred hhcCCccccchhhhhcCceEEEEeCCCCccccCCCCCccceecC----CCCcHHHHHHHHHHHHHHHhCCCCCEEEEecc
Confidence 34456776676788999999999999999999999999999873 3454545444333333 35788888876
Q ss_pred CC
Q psy10030 87 NT 88 (484)
Q Consensus 87 ~~ 88 (484)
.+
T Consensus 186 ~T 187 (528)
T 3r3i_A 186 NT 187 (528)
T ss_dssp TT
T ss_pred ch
Confidence 43
No 57
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=98.13 E-value=6.5e-06 Score=78.37 Aligned_cols=41 Identities=24% Similarity=0.463 Sum_probs=37.1
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDK 152 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~ 152 (484)
++.+||||||.|||||.+.||.++++ .|+|++++.++++..
T Consensus 7 ~~~~iIlA~G~g~R~~~~~~K~l~~i---~g~pll~~~i~~l~~ 47 (236)
T 1i52_A 7 DVCAVVPAAGFGRRMQTECPKQYLSI---GNQTILEHSVHALLA 47 (236)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHHT
T ss_pred ceeEEEECCcCccccCCCCCcceeeE---CCEEHHHHHHHHHHh
Confidence 58899999999999997789999999 799999999888853
No 58
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=98.10 E-value=9.1e-06 Score=76.72 Aligned_cols=63 Identities=24% Similarity=0.338 Sum_probs=41.6
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHHHHHHHHHHhhCCccccEEEEeCCCCchHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDKLIEIAKEKFGSGCLPWFIMTSELTDRPTREYF 184 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~l~~l~~~~~g~~~ipl~iMtS~~t~e~t~~~l 184 (484)
++.+||||||.|||||.+.||.+.|+ .|+|++++.++++... .+ +.-++....+.++.+.+.+
T Consensus 4 ~~~aiIlAaG~g~R~~~~~~K~l~~i---~g~pli~~~l~~l~~~-------~~---~~~ivvv~~~~~~~~~~~~ 66 (228)
T 2yc3_A 4 SVSVILLAGGQGKRMKMSMPKQYIPL---LGQPIALYSFFTFSRM-------PE---VKEIVVVCDPFFRDIFEEY 66 (228)
T ss_dssp CEEEEEECCCCC-------CGGGSEE---TTEEHHHHHHHHHHHC-------TT---EEEEEEECCGGGHHHHHTT
T ss_pred ceEEEEECCccccccCCCCCccEeEE---CCEEHHHHHHHHHHcC-------CC---CCeEEEEEChHHHHHHHHH
Confidence 58899999999999997789999999 8999999999888641 02 5555555565555554433
No 59
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=98.08 E-value=2.4e-05 Score=73.87 Aligned_cols=37 Identities=38% Similarity=0.552 Sum_probs=33.7
Q ss_pred EEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHH
Q psy10030 110 VAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKID 151 (484)
Q Consensus 110 vavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~ 151 (484)
|.+||||||.||||| .||.++++ .|+|++++.++.+.
T Consensus 1 m~aiILAgG~s~Rmg--~~K~ll~~---~G~pli~~~~~~l~ 37 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG--MEKTEVML---CGKKLIEWVLEKYS 37 (208)
T ss_dssp CEEEEECCCCCTTTT--SCGGGCEE---TTEEHHHHHHHHHT
T ss_pred CEEEEECCCchhhCC--CCCcccEE---CCeeHHHHHHHHhc
Confidence 468999999999999 79999999 89999999988874
No 60
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=98.05 E-value=7.8e-06 Score=76.11 Aligned_cols=38 Identities=26% Similarity=0.476 Sum_probs=34.0
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKID 151 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~ 151 (484)
++.+||||||.|||||. ||.++++ .|+|++++.++++.
T Consensus 2 ~~~~iIlAgG~g~Rmg~--~K~l~~i---~g~pll~~~l~~l~ 39 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFGG--DKLLAKI---DNTPIIMRTIRIYG 39 (197)
T ss_dssp CEEEEEECSCCTTCCCS--SGGGSBS---SSSBHHHHHHHHTT
T ss_pred ceEEEEECCcCcccCCC--CeeeCEe---CceEHHHHHHHHHH
Confidence 47889999999999984 9999999 89999999888774
No 61
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=97.99 E-value=6e-05 Score=70.40 Aligned_cols=39 Identities=36% Similarity=0.677 Sum_probs=35.5
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKID 151 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~ 151 (484)
++.+||||||.||||| ..||.++++ .|+|++++.++.+.
T Consensus 6 ~~~~iILAgG~s~Rmg-~~~K~ll~i---~G~pli~~~l~~l~ 44 (201)
T 1e5k_A 6 TITGVVLAGGKARRMG-GVDKGLLEL---NGKPLWQHVADALM 44 (201)
T ss_dssp SEEEEEECCCCCSSSC-SSCGGGSEE---TTEEHHHHHHHHHH
T ss_pred cceEEEEcCCCCCcCC-CCCCceeeE---CceeHHHHHHHHHH
Confidence 5889999999999998 579999999 89999999988875
No 62
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=97.81 E-value=2.8e-05 Score=72.55 Aligned_cols=38 Identities=34% Similarity=0.490 Sum_probs=34.6
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKID 151 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~ 151 (484)
++.+||||||.||||| .||.++|+ .|+|++++.++++.
T Consensus 14 ~~~~iILA~G~g~Rmg--~~K~ll~i---~g~pll~~~l~~l~ 51 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRFG--EDKLLYEI---KGKKVIERVYETAK 51 (201)
T ss_dssp CCEEEEEEESSCCCCS--TTHHHHHH---HHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCccCC--CCcccceE---CceEHHHHHHHHHH
Confidence 4789999999999998 79999999 79999999988875
No 63
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=97.67 E-value=0.00011 Score=75.45 Aligned_cols=40 Identities=20% Similarity=0.468 Sum_probs=36.7
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEKID 151 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~ 151 (484)
++.+||||||.|||||.+.||.+.++ .|+|++++.+++++
T Consensus 3 ki~aIILAaG~ssRmg~~~pK~ll~l---~GkPLi~~~l~~l~ 42 (371)
T 1w55_A 3 EMSLIMLAAGNSTRFNTKVKKQFLRL---GNDPLWLYATKNLS 42 (371)
T ss_dssp CEEEEEECCSCCTTTCSSSCGGGCEE---BTEEHHHHHHHHHH
T ss_pred ccEEEEECCCCCccCCCCCCcceEEE---CCeEHHHHHHHHHH
Confidence 57899999999999997789999999 89999999988885
No 64
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=97.62 E-value=9.8e-05 Score=70.28 Aligned_cols=40 Identities=28% Similarity=0.426 Sum_probs=32.9
Q ss_pred CEEEEEEcCCC---CccccccCCCccccccCCCCCcHHHHHHHHHHH
Q psy10030 109 DVAVIVLAGGQ---GTRLGADYPKGMYNIGLPSGKSLFQIQAEKIDK 152 (484)
Q Consensus 109 kvavviLaGG~---GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~i~~ 152 (484)
++.+||||||. |+||| ..||.++|+ .|+|++++.++++..
T Consensus 2 ~~~~vIlAaG~tRl~~r~~-~~~K~l~~i---~g~pll~~~l~~l~~ 44 (232)
T 2dpw_A 2 RPSAIVLAGGKEAWAERFG-VGSKALVPY---RGRPMVEWVLEALYA 44 (232)
T ss_dssp CCEEEEECCCBCSGGGTTT-CSBGGGSEE---TTEETHHHHHHHHHH
T ss_pred ceeEEEECCCCCccccccC-CCCceeeEE---CCEEHHHHHHHHHHh
Confidence 46789999999 44444 369999999 899999999988864
No 65
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=97.55 E-value=2.6e-05 Score=82.49 Aligned_cols=38 Identities=24% Similarity=0.440 Sum_probs=34.8
Q ss_pred HHHHHHHhhhccCCeeeeeecCCcccccCCCCCCcccccc
Q psy10030 16 KYRELGLKLISRGDVAVIVLAGGQGTRLGADYPNRIESIK 55 (484)
Q Consensus 16 ~~~~~g~~~~~~~~~~~~~~aggqg~~l~~~~pkg~~~i~ 55 (484)
+|++.|++++ +++||++||||||||||.+.||+|.++.
T Consensus 68 ~~~~~g~~~l--~k~~vviLAGGlGTRLg~~~PK~llpv~ 105 (469)
T 2icy_A 68 QDVAETKNLL--DKLVVLKLNGGLGTTMGCTGPKSVIEVR 105 (469)
T ss_dssp SCHHHHHHHH--TTEEEEEEECCBSGGGTCCSBGGGSEEE
T ss_pred hhHHHHHHhh--ccceEEEEcCCccccCCCCCCccccccC
Confidence 5677899988 9999999999999999999999999884
No 66
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=97.50 E-value=3.1e-05 Score=82.51 Aligned_cols=95 Identities=14% Similarity=0.133 Sum_probs=56.9
Q ss_pred HHHhhhccCCeeeeeecCCcccccCCCCCCcccccc-HHHHhhhhhhccccccccccccCCCCcccCCCCCChhhHHHHH
Q psy10030 20 LGLKLISRGDVAVIVLAGGQGTRLGADYPNRIESIK-IQVYIGHGYQELSGVQLSEVQVFPPNCLSGVNTVDASTLGKYR 98 (484)
Q Consensus 20 ~g~~~~~~~~~~~~~~aggqg~~l~~~~pkg~~~i~-~~~f~~~~~~~L~ai~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 98 (484)
.|+++|+ ++||++||||||||||.+.||+|++|+ =..|+.....++.......=.++|+..+.+..+ .+...++-
T Consensus 68 ~g~~~l~--k~avViLAGGlGTRLg~~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t--~e~t~~~f 143 (505)
T 2oeg_A 68 CDNAVLQ--STVVLKLNGGLGTGMGLCDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFNT--SASTKSFL 143 (505)
T ss_dssp CCHHHHH--TEEEEEEECCCCGGGTCCSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEECHHH--HHHHHHHH
T ss_pred HHHHHHh--cceEEEEcCCcccccCCCCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCcCEEEEeCCCC--HHHHHHHH
Confidence 6999999 999999999999999999999999998 111222222222221111002345555655421 23333332
Q ss_pred -----Hhchh-----cccCCCEEEEEEcCC
Q psy10030 99 -----ELGLK-----LISRGDVAVIVLAGG 118 (484)
Q Consensus 99 -----~~G~~-----~i~~gkvavviLaGG 118 (484)
.-|++ .+.++++.++-..|+
T Consensus 144 ~~~~~~fGl~~~~I~~f~Q~~~P~~~~~~~ 173 (505)
T 2oeg_A 144 KARYPWLYQVFDSEVELMQNQVPKILQDTL 173 (505)
T ss_dssp HHHCHHHHTTCCCCCEEECCCEECEETTTC
T ss_pred hhhhhccCCCccceEEEEEcCEEeEecCCC
Confidence 24652 256777777766553
No 67
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=97.25 E-value=0.00014 Score=69.46 Aligned_cols=37 Identities=32% Similarity=0.691 Sum_probs=27.2
Q ss_pred CEEEEEEcCCCCccccccCCCccccccCCCCCcHHHHHHHH
Q psy10030 109 DVAVIVLAGGQGTRLGADYPKGMYNIGLPSGKSLFQIQAEK 149 (484)
Q Consensus 109 kvavviLaGG~GTRLG~~~PKg~~~i~l~~~~s~l~l~~~~ 149 (484)
++.+||||||.|||||.+ ||.++++ .|+|++++.+++
T Consensus 25 ~~~aiILAgG~s~Rm~~~-~K~l~~i---~gkpli~~~l~~ 61 (236)
T 2px7_A 25 EVSVLIPAAGNGLRLGRG-PKAFLQV---GGRTLLEWTLAA 61 (236)
T ss_dssp CCEEEEECCC-------C-CGGGCBC---SSSBHHHHHHHH
T ss_pred ceEEEEEcCCCCccCCCC-CCeEEEE---CCEEHHHHHHHh
Confidence 578999999999999976 9999999 899999998877
No 68
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=97.11 E-value=0.00014 Score=77.28 Aligned_cols=33 Identities=27% Similarity=0.515 Sum_probs=30.4
Q ss_pred hhhccCCeeeeeecCCcccccCCCCCCcccccc
Q psy10030 23 KLISRGDVAVIVLAGGQGTRLGADYPNRIESIK 55 (484)
Q Consensus 23 ~~~~~~~~~~~~~aggqg~~l~~~~pkg~~~i~ 55 (484)
..++.+++||++||||||||||.+.||+|++|.
T Consensus 86 ~~~~~~k~avViLAGG~GTRmgs~~PK~l~~V~ 118 (488)
T 2i5k_A 86 NVSNLSKLAVLKLNGGLGTSMGCVGPKSVIEVR 118 (488)
T ss_dssp CSTTGGGEEEEEECCCBSGGGTCCSBSTTSCCB
T ss_pred hhhhcCCceEEEEcCCCcccCCCCCCccccccC
Confidence 466789999999999999999999999999984
No 69
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=92.19 E-value=0.068 Score=50.84 Aligned_cols=40 Identities=33% Similarity=0.481 Sum_probs=30.7
Q ss_pred CCeeeeeecCCcccccCCCCCCccccccHHHHhhhhhhcc
Q psy10030 28 GDVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 28 ~~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L 67 (484)
|++++++||||+|||+|.+.||.+.+++=.-++.+.+..+
T Consensus 6 ~~~~aIIlAaG~g~Rmg~~~~K~l~~l~Gkpll~~~l~~~ 45 (231)
T 3q80_A 6 GEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGL 45 (231)
T ss_dssp CCEEEEEECCCCCTTTCSSSCGGGCEETTEEHHHHHHHHH
T ss_pred CceEEEEECCCCCccCCCCCCceEEEECCeEHHHHHHHHH
Confidence 4788999999999999999999999884322445544433
No 70
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=90.35 E-value=0.11 Score=54.67 Aligned_cols=40 Identities=35% Similarity=0.597 Sum_probs=29.6
Q ss_pred cCCeeeeeecCCcccccCCCCCCccccccHHHHhhhhhhc
Q psy10030 27 RGDVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQE 66 (484)
Q Consensus 27 ~~~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~ 66 (484)
.+..||++||||+||||...-||-|.+++=.-++.+.+..
T Consensus 10 ~~~~~vvILAaG~GtRm~~~~pK~l~pv~gkp~i~~~l~~ 49 (501)
T 3st8_A 10 PGDTAVLVLAAGPGTRMRSDTPKVLHTLAGRSMLSHVLHA 49 (501)
T ss_dssp --CEEEEEEECSCCGGGCCSSCGGGCEETTEEHHHHHHHH
T ss_pred CCCceEEEECCcCcccCCCCCCHHHeEECChhHHHHHHHH
Confidence 4789999999999999999999999987532234554433
No 71
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=90.15 E-value=0.12 Score=49.21 Aligned_cols=26 Identities=35% Similarity=0.690 Sum_probs=17.0
Q ss_pred CeeeeeecCCcccccCC-CCCCccccc
Q psy10030 29 DVAVIVLAGGQGTRLGA-DYPNRIESI 54 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~-~~pkg~~~i 54 (484)
++.+++||||+|||++. +.||.+.++
T Consensus 3 ~~~aIIlAaG~g~Rm~~~~~pK~l~~l 29 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGNVSMPKQFLPL 29 (246)
T ss_dssp CEEEEEECC-----C-CSSCCGGGSEE
T ss_pred ccEEEEECCccccccCCCCCCCeEEEE
Confidence 56788899999999998 889999976
No 72
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=89.67 E-value=0.15 Score=47.51 Aligned_cols=27 Identities=30% Similarity=0.522 Sum_probs=23.0
Q ss_pred CCeeeeeecCCcccccCCCCCCccccc
Q psy10030 28 GDVAVIVLAGGQGTRLGADYPNRIESI 54 (484)
Q Consensus 28 ~~~~~~~~aggqg~~l~~~~pkg~~~i 54 (484)
-+..+++||||.|||+|.+.||.+.++
T Consensus 12 ~~~~aiILAaG~s~Rm~~~~~K~l~~i 38 (234)
T 1vpa_A 12 HMNVAILLAAGKGERMSENVPKQFLEI 38 (234)
T ss_dssp CCEEEEEEECCCCGGGCCSSCGGGCEE
T ss_pred ccCeEEEEcCcchhhcCCCCCceEEEE
Confidence 467788899999999997789988865
No 73
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=89.46 E-value=0.14 Score=47.58 Aligned_cols=27 Identities=33% Similarity=0.546 Sum_probs=13.7
Q ss_pred CCeeeeeecCCcccccCCCCCCccccc
Q psy10030 28 GDVAVIVLAGGQGTRLGADYPNRIESI 54 (484)
Q Consensus 28 ~~~~~~~~aggqg~~l~~~~pkg~~~i 54 (484)
.++.+++||||.|||++.+.||.+.++
T Consensus 5 ~~~~aiIlA~G~g~R~~~~~~K~l~~~ 31 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGADKPKQYVEI 31 (231)
T ss_dssp CCEEEEEECC----------CCSCCEE
T ss_pred CceEEEEEcccccccCCCCCCceEeEE
Confidence 456778899999999997789999876
No 74
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=89.40 E-value=0.17 Score=46.59 Aligned_cols=25 Identities=32% Similarity=0.537 Sum_probs=21.4
Q ss_pred eeeeeecCCcccccCCCCCCccccc
Q psy10030 30 VAVIVLAGGQGTRLGADYPNRIESI 54 (484)
Q Consensus 30 ~~~~~~aggqg~~l~~~~pkg~~~i 54 (484)
+.+++||||+|||++...||.+.++
T Consensus 3 ~~~vIlA~G~g~R~~~~~~K~l~~~ 27 (223)
T 2xwl_A 3 TVAVVPAAGSGERLRAGRPKAFVTL 27 (223)
T ss_dssp EEEEEECCCCCGGGTSSSCGGGSEE
T ss_pred eEEEEECCccCcccCCCCCCeeeEE
Confidence 5677899999999997789998876
No 75
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=88.84 E-value=0.19 Score=47.06 Aligned_cols=26 Identities=38% Similarity=0.617 Sum_probs=22.1
Q ss_pred CeeeeeecCCcccccCCCCCCccccc
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESI 54 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i 54 (484)
++.+++||||.|||+|.+.||.+.++
T Consensus 7 ~~~~iIlA~G~g~R~~~~~~K~l~~i 32 (236)
T 1i52_A 7 DVCAVVPAAGFGRRMQTECPKQYLSI 32 (236)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGSEE
T ss_pred ceeEEEECCcCccccCCCCCcceeeE
Confidence 46778899999999997789998876
No 76
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=88.32 E-value=0.18 Score=46.81 Aligned_cols=26 Identities=42% Similarity=0.755 Sum_probs=15.7
Q ss_pred CeeeeeecCCcccccCCCCCCccccc
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESI 54 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i 54 (484)
++.+++||||.|||++.+.||.+.++
T Consensus 4 ~~~aiIlAaG~g~R~~~~~~K~l~~i 29 (228)
T 2yc3_A 4 SVSVILLAGGQGKRMKMSMPKQYIPL 29 (228)
T ss_dssp CEEEEEECCCCC-------CGGGSEE
T ss_pred ceEEEEECCccccccCCCCCccEeEE
Confidence 46678899999999997778988876
No 77
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=87.88 E-value=0.2 Score=47.22 Aligned_cols=25 Identities=36% Similarity=0.717 Sum_probs=14.5
Q ss_pred CeeeeeecCCcccccCCCCCCccccc
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESI 54 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i 54 (484)
++.+++||||.|||++.+ ||.+.++
T Consensus 25 ~~~aiILAgG~s~Rm~~~-~K~l~~i 49 (236)
T 2px7_A 25 EVSVLIPAAGNGLRLGRG-PKAFLQV 49 (236)
T ss_dssp CCEEEEECCC-------C-CGGGCBC
T ss_pred ceEEEEEcCCCCccCCCC-CCeEEEE
Confidence 467788999999999976 8888865
No 78
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=87.87 E-value=0.24 Score=45.35 Aligned_cols=24 Identities=38% Similarity=0.765 Sum_probs=20.1
Q ss_pred eeeeeecCCcccccCCCCCCcccccc
Q psy10030 30 VAVIVLAGGQGTRLGADYPNRIESIK 55 (484)
Q Consensus 30 ~~~~~~aggqg~~l~~~~pkg~~~i~ 55 (484)
+.+++||||+|||+|. ||.+.+++
T Consensus 3 ~~~iIlAgG~g~Rmg~--~K~l~~i~ 26 (197)
T 3d5n_A 3 IGVIILAAGEGKRFGG--DKLLAKID 26 (197)
T ss_dssp EEEEEECSCCTTCCCS--SGGGSBSS
T ss_pred eEEEEECCcCcccCCC--CeeeCEeC
Confidence 5678899999999984 89888763
No 79
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=87.01 E-value=0.3 Score=44.95 Aligned_cols=25 Identities=28% Similarity=0.581 Sum_probs=20.8
Q ss_pred CeeeeeecCCcccccCCCCCCccccc
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESI 54 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i 54 (484)
++.+++||||+|+|+| +.||.+.++
T Consensus 6 ~~~~iILAgG~s~Rmg-~~~K~ll~i 30 (201)
T 1e5k_A 6 TITGVVLAGGKARRMG-GVDKGLLEL 30 (201)
T ss_dssp SEEEEEECCCCCSSSC-SSCGGGSEE
T ss_pred cceEEEEcCCCCCcCC-CCCCceeeE
Confidence 4677889999999998 578888865
No 80
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=85.37 E-value=0.32 Score=43.71 Aligned_cols=37 Identities=24% Similarity=0.450 Sum_probs=25.9
Q ss_pred CeeeeeecCCcccccCCCCCCccccccHHHHhhhhhhcc
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L 67 (484)
++.+++||||.|||+| .||.+.+++=..++.+.+..+
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~~g~pll~~~l~~l 41 (197)
T 2wee_A 5 QITGVVLAAGRSNRLG--TPKQLLPYRDTTVLGATLDVA 41 (197)
T ss_dssp EEEEEEEECCCCTTTS--SCGGGSEETTEEHHHHHHHHH
T ss_pred ceEEEEECCCCcccCC--CCeEcCeeCCccHHHHHHHHH
Confidence 4667889999999997 899999874222345544333
No 81
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=85.19 E-value=0.37 Score=43.29 Aligned_cols=37 Identities=27% Similarity=0.403 Sum_probs=26.0
Q ss_pred CeeeeeecCCcccccCCCCCCccccccHHHHhhhhhhcc
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L 67 (484)
++.+++||||.|||+| .||.+.+++=..++.+.+..+
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~~g~pli~~~l~~l 41 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG--TPKQLLPLGDTTLLGATLAMA 41 (199)
T ss_dssp CEEEEEEESSCCTTTT--SCGGGCEETTEEHHHHHHHHH
T ss_pred ceEEEEECCCCCCCCC--CCEEeCEeCccCHHHHHHHHH
Confidence 4667889999999998 799999875222345544333
No 82
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=83.60 E-value=0.38 Score=44.60 Aligned_cols=26 Identities=35% Similarity=0.666 Sum_probs=12.3
Q ss_pred CeeeeeecCCcccccCC-CCCCccccc
Q psy10030 29 DVAVIVLAGGQGTRLGA-DYPNRIESI 54 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~-~~pkg~~~i 54 (484)
++.+++||||.|||++. ..||.+.++
T Consensus 2 m~~~iIlA~G~g~R~~~~~~~K~l~~i 28 (236)
T 2vsh_A 2 MIYAGILAGGTGTRMGISNLPKQFLEL 28 (236)
T ss_dssp CEEEEEEEC-----------CGGGSEE
T ss_pred ceEEEEeCCccccccCCCCCCCeeeee
Confidence 45678899999999985 568888765
No 83
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=83.58 E-value=0.45 Score=44.12 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=23.7
Q ss_pred eeeeeecCCcccccCCCCCCccccccHHHHhhhhh
Q psy10030 30 VAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGY 64 (484)
Q Consensus 30 ~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~ 64 (484)
+.+++||||.|||++ ||.+.+++=.-++.+.+
T Consensus 5 ~~aiIlA~G~g~R~~---~K~l~~i~gkpll~~~l 36 (228)
T 1ezi_A 5 NIAVILARQNSKGLP---LKNLRKMNGISLLGHTI 36 (228)
T ss_dssp EEEEEECCSSCSSST---TTTTCEETTEEHHHHHH
T ss_pred eEEEEecCCCCCCCC---CcccceeCCcCHHHHHH
Confidence 667889999999998 99999874222344444
No 84
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=81.60 E-value=0.64 Score=43.08 Aligned_cols=35 Identities=26% Similarity=0.173 Sum_probs=24.9
Q ss_pred eeeeeecCCcccccCCCCCCccccccHHHHhhhhhhcc
Q psy10030 30 VAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 30 ~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L 67 (484)
+.++++|||.|||++ ||.+.+++=.-++.+.+..+
T Consensus 3 ~~aiIlA~G~g~R~~---~K~l~~i~g~pli~~~l~~~ 37 (234)
T 2y6p_A 3 RAVIIPARLGSTRLK---EKPLKNLLGKPLIRWVVEGL 37 (234)
T ss_dssp EEEEEECCSCCTTTT---TGGGCEETTEEHHHHHHHHH
T ss_pred eEEEEEcCCCCCCCC---CCcceeECCEEHHHHHHHHH
Confidence 567889999999998 99999874322445544333
No 85
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=81.42 E-value=0.61 Score=43.31 Aligned_cols=22 Identities=36% Similarity=0.585 Sum_probs=18.6
Q ss_pred eeeeecCCcccccCCCCCCccccc
Q psy10030 31 AVIVLAGGQGTRLGADYPNRIESI 54 (484)
Q Consensus 31 ~~~~~aggqg~~l~~~~pkg~~~i 54 (484)
.+++||||+|+|+| .||.+.++
T Consensus 2 ~aiILAgG~s~Rmg--~~K~ll~~ 23 (208)
T 3ngw_A 2 KVAVLVGGVGRRIG--MEKTEVML 23 (208)
T ss_dssp EEEEECCCCCTTTT--SCGGGCEE
T ss_pred EEEEECCCchhhCC--CCCcccEE
Confidence 45678999999998 78998876
No 86
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=80.90 E-value=0.71 Score=43.96 Aligned_cols=26 Identities=38% Similarity=0.653 Sum_probs=21.5
Q ss_pred CeeeeeecCCcccccC---CCCCCccccc
Q psy10030 29 DVAVIVLAGGQGTRLG---ADYPNRIESI 54 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~---~~~pkg~~~i 54 (484)
++.+++||||.||||+ ...||.+.++
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i 53 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQV 53 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEE
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeE
Confidence 4566779999999998 5789999876
No 87
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=80.70 E-value=0.7 Score=46.23 Aligned_cols=37 Identities=19% Similarity=0.433 Sum_probs=25.6
Q ss_pred eeeeecCCcccccC----CCCCCccccccH-HHHhhhhhhcc
Q psy10030 31 AVIVLAGGQGTRLG----ADYPNRIESIKI-QVYIGHGYQEL 67 (484)
Q Consensus 31 ~~~~~aggqg~~l~----~~~pkg~~~i~~-~~f~~~~~~~L 67 (484)
.+++||||.||||+ ..+||.+.+++= ..++.+.+..+
T Consensus 3 ~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l 44 (336)
T 2x65_A 3 KALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERV 44 (336)
T ss_dssp EEEEECCCBCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHH
T ss_pred EEEEECCCCCccCCCCcCCCCCceEEECCCCCcHHHHHHHHH
Confidence 35669999999998 679999999832 22345544333
No 88
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=80.55 E-value=0.5 Score=43.26 Aligned_cols=25 Identities=36% Similarity=0.478 Sum_probs=20.6
Q ss_pred CeeeeeecCCcccccCCCCCCcccccc
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESIK 55 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i~ 55 (484)
++.+++||||+|||+| .||.+.+++
T Consensus 14 ~~~~iILA~G~g~Rmg--~~K~ll~i~ 38 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRFG--EDKLLYEIK 38 (201)
T ss_dssp CCEEEEEEESSCCCCS--TTHHHHHHH
T ss_pred CceEEEECCCCCccCC--CCcccceEC
Confidence 3567889999999998 789888763
No 89
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=79.60 E-value=0.9 Score=43.49 Aligned_cols=41 Identities=27% Similarity=0.314 Sum_probs=28.0
Q ss_pred cCCeeeeeecCCcccccCC---CCCCccccccHHHHhhhhhhcc
Q psy10030 27 RGDVAVIVLAGGQGTRLGA---DYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 27 ~~~~~~~~~aggqg~~l~~---~~pkg~~~i~~~~f~~~~~~~L 67 (484)
+.+..+++||||.|||++. ..||.+.+++=.-++.+.+..+
T Consensus 22 ~~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~pli~~~l~~l 65 (269)
T 4ecm_A 22 SNAMKGIILAGGTGSRLYPITKVTNKHLLPVGRYPMIYHAVYKL 65 (269)
T ss_dssp --CEEEEEECCSCCGGGTTTTSSSCGGGSEETTEEHHHHHHHHH
T ss_pred ccCcEEEEECCCCccccccccCCCCceecEECCEEHHHHHHHHH
Confidence 3456777899999999987 8999999985222344544333
No 90
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=79.58 E-value=0.72 Score=43.41 Aligned_cols=37 Identities=30% Similarity=0.383 Sum_probs=21.0
Q ss_pred eeeeecCCcccccCC---CCCCccccccHHHHhhhhhhcc
Q psy10030 31 AVIVLAGGQGTRLGA---DYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 31 ~~~~~aggqg~~l~~---~~pkg~~~i~~~~f~~~~~~~L 67 (484)
.+++||||.||||+. +.||.+.+++=.-++.+.+..+
T Consensus 4 ~avIlAaG~gtRl~~lt~~~pK~l~~i~gkpli~~~l~~l 43 (259)
T 1tzf_A 4 KAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMY 43 (259)
T ss_dssp EEEEEECSCC--------CCCGGGCEETTEEHHHHHHHHH
T ss_pred EEEEECCCCcccCCCccCCCCccccEECCEEHHHHHHHHH
Confidence 456689999999986 6799999884222344544333
No 91
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=79.34 E-value=0.74 Score=42.83 Aligned_cols=25 Identities=36% Similarity=0.650 Sum_probs=14.7
Q ss_pred CeeeeeecCCcccccCCCCCCccccc
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESI 54 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i 54 (484)
++.+++||||.|||++.. ||.+.++
T Consensus 18 ~~~~iIlA~G~g~R~~~~-~K~l~~i 42 (232)
T 2xme_A 18 LMKAVILAAGLGTRLGGV-PKPLVRV 42 (232)
T ss_dssp CEEEEEEECC------CC-CGGGCEE
T ss_pred cceEEEECCcCcCcCCCC-CcEEeEE
Confidence 366778999999999754 8988876
No 92
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=79.24 E-value=0.86 Score=42.58 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=25.1
Q ss_pred CeeeeeecCCcccccCCCCCCccccccHHHHhhhhhhcc
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L 67 (484)
++.+++||||.|||++ ||.+.+++=.-++.+.+..+
T Consensus 2 ~~~aiIlA~G~~~R~~---~K~l~~i~g~pli~~~i~~~ 37 (245)
T 1h7e_A 2 KAVIVIPARYGSSRLP---GKPLLDIVGKPMIQHVYERA 37 (245)
T ss_dssp CEEEEEECCSCCSSST---TGGGCEETTEEHHHHHHHHH
T ss_pred CeEEEEEcCCcCCCCC---CCcccccCCchHHHHHHHHH
Confidence 3567889999999996 99999874222345544333
No 93
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=79.13 E-value=0.95 Score=46.11 Aligned_cols=39 Identities=18% Similarity=0.269 Sum_probs=28.2
Q ss_pred CeeeeeecCCcccccCCCCCCccccccHHHHhhhhhhcc
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L 67 (484)
++++++||||+|||++.+.||.+.+++=.-++.+.+..+
T Consensus 3 ki~aIILAaG~ssRmg~~~pK~ll~l~GkPLi~~~l~~l 41 (371)
T 1w55_A 3 EMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNL 41 (371)
T ss_dssp CEEEEEECCSCCTTTCSSSCGGGCEEBTEEHHHHHHHHH
T ss_pred ccEEEEECCCCCccCCCCCCcceEEECCeEHHHHHHHHH
Confidence 366788999999999988899999874222345544333
No 94
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=78.99 E-value=0.44 Score=45.60 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=24.9
Q ss_pred eeeecCCcccccC---CCCCCccccccHHHHhhhhhhcc
Q psy10030 32 VIVLAGGQGTRLG---ADYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 32 ~~~~aggqg~~l~---~~~pkg~~~i~~~~f~~~~~~~L 67 (484)
+++||||.||||. .+.||.+.+++=.-++.+.+..+
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gkpli~~~l~~l 40 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQTLFEHSVNSF 40 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTEEHHHHHHGGG
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCeEHHHHHHHHH
Confidence 5779999999985 37899999984322445544333
No 95
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=78.98 E-value=0.88 Score=46.71 Aligned_cols=39 Identities=26% Similarity=0.491 Sum_probs=29.0
Q ss_pred CeeeeeecCCcccccCCCCCCccccccHHHHhhhhhhcc
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L 67 (484)
++.+++||||+|||++...||.+.+++=.-++.+.+..+
T Consensus 8 ~~~aiIlA~G~g~Rl~~~~pK~l~~i~g~pli~~~l~~l 46 (459)
T 4fce_A 8 SMSVVILAAGKGTRMYSDLPKVLHPLAGKPMVQHVIDAA 46 (459)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGSEETTEEHHHHHHHHH
T ss_pred cceEEEECCCCCccCCCCCCcccCeeCCeeHHHHHHHHH
Confidence 577888999999999999999999875322445544433
No 96
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=78.90 E-value=0.97 Score=46.33 Aligned_cols=40 Identities=25% Similarity=0.455 Sum_probs=28.7
Q ss_pred CCeeeeeecCCcccccCCCCCCccccccHHHHhhhhhhcc
Q psy10030 28 GDVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 28 ~~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L 67 (484)
-++.+++||||.||||+...||.+.+++=.-++.+.+..+
T Consensus 4 ~~~~aiIlA~G~g~Rl~~~~pK~l~~i~gkpli~~~l~~l 43 (456)
T 2v0h_A 4 KALSAVILAAGKGTRMYSDLPKVLHTIAGKPMVKHVIDTA 43 (456)
T ss_dssp CCEEEEEECCCCCGGGCSSSCGGGSEETTEEHHHHHHHHH
T ss_pred CcceEEEECCCCCcccCCCCCccccEECCccHHHHHHHHH
Confidence 3567788999999999988999999874222345544333
No 97
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=77.00 E-value=1.2 Score=42.77 Aligned_cols=25 Identities=28% Similarity=0.404 Sum_probs=20.9
Q ss_pred eeeeecCCcccccCC---CCCCcccccc
Q psy10030 31 AVIVLAGGQGTRLGA---DYPNRIESIK 55 (484)
Q Consensus 31 ~~~~~aggqg~~l~~---~~pkg~~~i~ 55 (484)
.+++||||.||||+. ..||.+.+++
T Consensus 4 ~avIlAaG~gtRl~plt~~~pK~ll~i~ 31 (281)
T 3juk_A 4 KCLFPAAGYGTRFLPITKTIPKEMLPIV 31 (281)
T ss_dssp EEEEECCSCCGGGTTGGGTSCGGGCBSS
T ss_pred EEEEECCcCCcccCccccCCCcccceEC
Confidence 456789999999987 8899998874
No 98
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=76.59 E-value=1.2 Score=43.68 Aligned_cols=25 Identities=44% Similarity=0.538 Sum_probs=20.9
Q ss_pred eeeeecCCcccccC---CCCCCcccccc
Q psy10030 31 AVIVLAGGQGTRLG---ADYPNRIESIK 55 (484)
Q Consensus 31 ~~~~~aggqg~~l~---~~~pkg~~~i~ 55 (484)
.+++||||.||||+ ...||.+.+++
T Consensus 5 ~aIILAgG~GtRl~plT~~~pK~llpi~ 32 (295)
T 1lvw_A 5 KGIVLAGGSGTRLYPITRAVSKQLLPIY 32 (295)
T ss_dssp EEEEECCCCCSTTTTTTTSSCGGGSEET
T ss_pred EEEEECCCCCCccccccCCCCceecEEC
Confidence 45669999999998 67899999874
No 99
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=75.47 E-value=0.94 Score=44.25 Aligned_cols=26 Identities=35% Similarity=0.507 Sum_probs=21.2
Q ss_pred eeeeeecCCcccccC---CCCCCcccccc
Q psy10030 30 VAVIVLAGGQGTRLG---ADYPNRIESIK 55 (484)
Q Consensus 30 ~~~~~~aggqg~~l~---~~~pkg~~~i~ 55 (484)
..+++||||.||||+ ...||.+.+++
T Consensus 3 ~~aIILAgG~gtRl~plT~~~pK~llpi~ 31 (293)
T 1fxo_A 3 RKGIILAGGSGTRLHPATLAISKQLLPVY 31 (293)
T ss_dssp EEEEEECCCCCTTTTTHHHHSCGGGSEET
T ss_pred ceEEEECCCCCCcCccccCCCCceeCeEC
Confidence 345678999999998 46899999874
No 100
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=75.39 E-value=0.96 Score=40.72 Aligned_cols=35 Identities=26% Similarity=0.442 Sum_probs=20.9
Q ss_pred eeeecCCcccccCCCCCCccccccHHHHhhhhhhcc
Q psy10030 32 VIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 32 ~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L 67 (484)
+++||||.|||++. .||.+.+++=.-++.+.+..+
T Consensus 3 aiIlA~G~s~R~~~-~~K~l~~~~g~pli~~~l~~l 37 (196)
T 3rsb_A 3 ALIMAGGKGTRMGG-VEKPLIKLCGRCLIDYVVSPL 37 (196)
T ss_dssp EEEEC----CGGGG-SCGGGCEETTEEHHHHHHHHH
T ss_pred EEEECCCCCCcCCC-CCccEEEECCEEHHHHHHHHH
Confidence 56799999999987 899999874222445544433
No 101
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=75.10 E-value=1.4 Score=44.04 Aligned_cols=26 Identities=35% Similarity=0.561 Sum_probs=21.6
Q ss_pred eeeeeecCCcccccC----CCCCCcccccc
Q psy10030 30 VAVIVLAGGQGTRLG----ADYPNRIESIK 55 (484)
Q Consensus 30 ~~~~~~aggqg~~l~----~~~pkg~~~i~ 55 (484)
..+++||||.||||. ..+||.+.+++
T Consensus 3 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~ 32 (337)
T 2cu2_A 3 TYALVMAGGRGERLWPLSREDRPKPFLPLF 32 (337)
T ss_dssp EEEEEECCCCCGGGTTTCBTTBCGGGCBCG
T ss_pred eEEEEEcCCCcccCCccCCCCCCceEEEcC
Confidence 345679999999996 67999999983
No 102
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=73.69 E-value=1.3 Score=43.45 Aligned_cols=25 Identities=40% Similarity=0.574 Sum_probs=21.0
Q ss_pred eeeeecCCcccccC---CCCCCcccccc
Q psy10030 31 AVIVLAGGQGTRLG---ADYPNRIESIK 55 (484)
Q Consensus 31 ~~~~~aggqg~~l~---~~~pkg~~~i~ 55 (484)
.+++||||.||||+ ...||.+.+++
T Consensus 5 ~aIILAgG~GtRl~plT~~~pK~llpi~ 32 (296)
T 1mc3_A 5 KGIILAGGSGTRLHPITRGVSKQLLPIY 32 (296)
T ss_dssp EEEEECCCCCGGGHHHHTTSCGGGSEET
T ss_pred EEEEECCCCCCcCCcccCCCCceeeEEC
Confidence 35669999999998 68899999874
No 103
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=71.90 E-value=1.4 Score=45.36 Aligned_cols=26 Identities=35% Similarity=0.452 Sum_probs=16.4
Q ss_pred eeeeeecCCcccccC---CCCCCcccccc
Q psy10030 30 VAVIVLAGGQGTRLG---ADYPNRIESIK 55 (484)
Q Consensus 30 ~~~~~~aggqg~~l~---~~~pkg~~~i~ 55 (484)
+.+++||||.||||+ ...||.+.+++
T Consensus 21 ~~avILAaG~gtRl~plT~~~pK~llpi~ 49 (451)
T 1yp2_A 21 VLGIILGGGAGTRLYPLTKKRAKPAVPLG 49 (451)
T ss_dssp EEEEEC------CCTTTTTTSCGGGCEET
T ss_pred eEEEEECCCCCCcccchhcCCcceeeEEC
Confidence 556779999999998 67899999885
No 104
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=71.68 E-value=1.8 Score=41.12 Aligned_cols=34 Identities=26% Similarity=0.261 Sum_probs=23.8
Q ss_pred CeeeeeecCCcccccCCCCCCccccccHHHHhhhhhh
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQ 65 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~ 65 (484)
++.++++|||.||||+ ||-+.+++=.-++.+.+.
T Consensus 2 ~~~aiIlA~G~stRlp---~K~L~~i~GkPli~~~l~ 35 (252)
T 3oam_A 2 SFTVVIPARYQSTRLP---GKPLADIGGKPMIQWVYE 35 (252)
T ss_dssp CEEEEEECCCCCSSST---TGGGCEETTEEHHHHHHH
T ss_pred ceEEEEecCcCCCCCC---CcceeeECCEEHHHHHHH
Confidence 4678889999999994 799988742223444443
No 105
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=71.32 E-value=1.7 Score=44.41 Aligned_cols=26 Identities=31% Similarity=0.413 Sum_probs=22.2
Q ss_pred eeeeeecCCcccccC---CCCCCcccccc
Q psy10030 30 VAVIVLAGGQGTRLG---ADYPNRIESIK 55 (484)
Q Consensus 30 ~~~~~~aggqg~~l~---~~~pkg~~~i~ 55 (484)
+.+++||||.||||+ ...||.+.+++
T Consensus 13 ~~avILAaG~gtRl~plT~~~pK~llpi~ 41 (420)
T 3brk_X 13 AMAYVLAGGRGSRLKELTDRRAKPAVYFG 41 (420)
T ss_dssp EEEEEEECCCCGGGGGGGSSSCGGGSEET
T ss_pred eEEEEEcCCCCCccchhhcCCcccccccC
Confidence 456778999999998 78999999885
No 106
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=70.61 E-value=1.8 Score=42.25 Aligned_cols=24 Identities=33% Similarity=0.650 Sum_probs=20.3
Q ss_pred eeeeeecCCcccccCCCCCCcccccc
Q psy10030 30 VAVIVLAGGQGTRLGADYPNRIESIK 55 (484)
Q Consensus 30 ~~~~~~aggqg~~l~~~~pkg~~~i~ 55 (484)
+.+++||||+|||++. ||.+.+++
T Consensus 6 ~~~vIlAaG~g~R~~~--~K~l~~ig 29 (303)
T 3pnn_A 6 PTLFVLAAGMGSRYGS--LKQLDGIG 29 (303)
T ss_dssp CEEEEECTTCBCTTSS--BCCCCCCS
T ss_pred eEEEEECCCCcccCCC--CceEeEcC
Confidence 4567799999999986 89999983
No 107
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=70.26 E-value=1.7 Score=41.66 Aligned_cols=33 Identities=30% Similarity=0.300 Sum_probs=20.7
Q ss_pred CeeeeeecCCcccccCCCCCCccccccHHHHhhhhh
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGY 64 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~ 64 (484)
++.++++|||.||||+ ||.+.+++=.-++.+.+
T Consensus 9 ~~~aIIlA~G~stRl~---~K~L~~i~GkPli~~~l 41 (256)
T 3tqd_A 9 EFRVIIPARFDSTRLP---GKALVDIAGKPMIQHVY 41 (256)
T ss_dssp CCEEEEECCCC---CT---TGGGCEETTEEHHHHHH
T ss_pred CceEEEEcCCCCCCCC---CCCeeeECCchHHHHHH
Confidence 4677889999999997 89998874222334444
No 108
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=69.29 E-value=2.3 Score=41.14 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=24.1
Q ss_pred eeeeeecCCcccccCC---CCCCccccccHHHHhhhhh
Q psy10030 30 VAVIVLAGGQGTRLGA---DYPNRIESIKIQVYIGHGY 64 (484)
Q Consensus 30 ~~~~~~aggqg~~l~~---~~pkg~~~i~~~~f~~~~~ 64 (484)
..+++||||.||||.. ..||.+.+++=.-++.+.+
T Consensus 15 ~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l 52 (297)
T 2ux8_A 15 RKAVFPVAGLGTRFLPATKAMPKEMLPVVDRPLIQYAV 52 (297)
T ss_dssp CEEEEEECCCCGGGTTTTSSSCGGGCEETTEEHHHHHH
T ss_pred cEEEEECCCCccccCccccCCCceeeeECCeEHHHHHH
Confidence 3456688999999975 7899999874222334433
No 109
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=68.60 E-value=2.1 Score=40.55 Aligned_cols=33 Identities=27% Similarity=0.307 Sum_probs=22.5
Q ss_pred eeeeeecCCcccccCCCCCCccccccHHHHhhhhhh
Q psy10030 30 VAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQ 65 (484)
Q Consensus 30 ~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~ 65 (484)
+.+++||||.|||++ +|.+.+++=.-++.+.+.
T Consensus 3 ~~aiIlA~G~g~R~~---~K~l~~~~gkpli~~~l~ 35 (262)
T 1vic_A 3 FTVIIPARFASSRLP---GKPLADIKGKPMIQHVFE 35 (262)
T ss_dssp CEEEEECCCCCSSST---TGGGCEETTEEHHHHHHH
T ss_pred cEEEEEcCCCCCCCC---CCccccCCCeEHHHHHHH
Confidence 566789999999996 598888742223344443
No 110
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=67.86 E-value=2.4 Score=41.69 Aligned_cols=26 Identities=31% Similarity=0.457 Sum_probs=21.1
Q ss_pred eeeeeecCCcccccCC---CCCCcccccc
Q psy10030 30 VAVIVLAGGQGTRLGA---DYPNRIESIK 55 (484)
Q Consensus 30 ~~~~~~aggqg~~l~~---~~pkg~~~i~ 55 (484)
..+++||||.||||+. ..||.+.+++
T Consensus 13 ~~aVIlAaG~gtRl~plt~~~pK~ll~i~ 41 (323)
T 2pa4_A 13 KTVVVPAAGLGTRFLPATKTVPKELLPVV 41 (323)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEET
T ss_pred eEEEEECCCCccccCccccCCCceeeeEC
Confidence 3456789999999975 7899999874
No 111
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=67.68 E-value=2.2 Score=43.93 Aligned_cols=36 Identities=28% Similarity=0.571 Sum_probs=25.7
Q ss_pred eeeecCCcccccCCCCCCccccccHHHHhhhhhhcc
Q psy10030 32 VIVLAGGQGTRLGADYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 32 ~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~~~L 67 (484)
+++||||.||||+...||.+.+++=.-++.+.+..+
T Consensus 14 ~vIlAaG~g~R~~~~~pK~l~~i~gkpli~~~l~~l 49 (468)
T 1hm9_A 14 AIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSV 49 (468)
T ss_dssp EEEECCCCCGGGCCSSCGGGSEETTEEHHHHHHHHH
T ss_pred EEEEcCCCCccCCCCCCcEeeEECCccHHHHHHHHH
Confidence 566889999999988999999874322445544333
No 112
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=67.11 E-value=2.8 Score=40.55 Aligned_cols=26 Identities=19% Similarity=0.373 Sum_probs=21.0
Q ss_pred eeeeeecCCcccccCC---CCCCcccccc
Q psy10030 30 VAVIVLAGGQGTRLGA---DYPNRIESIK 55 (484)
Q Consensus 30 ~~~~~~aggqg~~l~~---~~pkg~~~i~ 55 (484)
..+++||||.||||+. ..||.+.+++
T Consensus 9 ~~avIlAaG~gtRl~plt~~~pK~ll~i~ 37 (302)
T 2e3d_A 9 KKAVIPVAGLGTRMLPATKAIPKEMLPLV 37 (302)
T ss_dssp CEEEEECCSCCGGGTTTTSSSCGGGCEET
T ss_pred cEEEEECCcCcccCCccccCCCceeeEEC
Confidence 4566789999999975 6799999874
No 113
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=66.13 E-value=2.3 Score=41.61 Aligned_cols=37 Identities=24% Similarity=0.448 Sum_probs=18.4
Q ss_pred eeeeeecCCcccccC--C--CCCCcccccc--HHHHhhhhhhcc
Q psy10030 30 VAVIVLAGGQGTRLG--A--DYPNRIESIK--IQVYIGHGYQEL 67 (484)
Q Consensus 30 ~~~~~~aggqg~~l~--~--~~pkg~~~i~--~~~f~~~~~~~L 67 (484)
+.+++||||.||||. . ..||.+.+++ -+ ++.+.+..+
T Consensus 5 ~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~p-li~~~l~~l 47 (308)
T 2qh5_A 5 IKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHKS-LFELSFKRN 47 (308)
T ss_dssp EEEEEECC-------------CCGGGCTTBTTBC-HHHHHHHHH
T ss_pred cEEEEEcCCCCccCCccCCCCCCCEEEECCCCCC-HHHHHHHHH
Confidence 456679999999995 2 6899999983 33 345544443
No 114
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=64.27 E-value=2.9 Score=40.25 Aligned_cols=32 Identities=28% Similarity=0.248 Sum_probs=19.4
Q ss_pred HHhhhccC-CeeeeeecCCcccccCCCCCCcccccc
Q psy10030 21 GLKLISRG-DVAVIVLAGGQGTRLGADYPNRIESIK 55 (484)
Q Consensus 21 g~~~~~~~-~~~~~~~aggqg~~l~~~~pkg~~~i~ 55 (484)
|+--+... ++.+++||||+||||+ +|.+.+++
T Consensus 9 ~~~~~~~~M~~~aIIlA~G~stRlp---~K~L~~i~ 41 (264)
T 3k8d_A 9 GLVPRGSHMSFVVIIPARYASTRLP---GKPLVDIN 41 (264)
T ss_dssp ---------CCEEEEECCSCCSSST---TGGGCEET
T ss_pred CcccCCCCCceEEEEEcCCCCCCCC---CcceeeEC
Confidence 44333333 4778889999999994 48888764
No 115
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=63.13 E-value=3.6 Score=38.11 Aligned_cols=23 Identities=26% Similarity=0.424 Sum_probs=18.7
Q ss_pred CeeeeeecCCcccccCCCCCCccccc
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESI 54 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i 54 (484)
++.+++||||.|||++ +|.+.++
T Consensus 3 ~~~aiIlA~G~s~R~~---~K~l~~i 25 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP---LKNIKRL 25 (229)
T ss_dssp CEEEEEECCSCCSSSS---CTTTSEE
T ss_pred cEEEEEEcCCCCCCCC---CcccceE
Confidence 4677889999999995 4877765
No 116
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=55.03 E-value=5.5 Score=37.96 Aligned_cols=33 Identities=15% Similarity=-0.006 Sum_probs=23.3
Q ss_pred CeeeeeecCCcccccCCCCCCccccccHHHHhhhhh
Q psy10030 29 DVAVIVLAGGQGTRLGADYPNRIESIKIQVYIGHGY 64 (484)
Q Consensus 29 ~~~~~~~aggqg~~l~~~~pkg~~~i~~~~f~~~~~ 64 (484)
|..++++|+|.|||++ +|.+.+++=.-++.+.+
T Consensus 1 M~~aiIlA~G~stR~~---~K~L~~i~GkPli~~~i 33 (253)
T 4fcu_A 1 MKHIVIPARFSSSRLP---GKPLLLIHDRPMILRVV 33 (253)
T ss_dssp CEEEEEECCSCCTTST---TGGGSEETTEEHHHHHH
T ss_pred CeEEEEEeCCCCCCCC---CCceeeECCeEhHHHHH
Confidence 4567889999999997 58888774322445544
No 117
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=53.19 E-value=5.7 Score=39.83 Aligned_cols=36 Identities=28% Similarity=0.363 Sum_probs=25.3
Q ss_pred eeeecCCcccccC---CCCCCccccccHHHHhhhhhhcc
Q psy10030 32 VIVLAGGQGTRLG---ADYPNRIESIKIQVYIGHGYQEL 67 (484)
Q Consensus 32 ~~~~aggqg~~l~---~~~pkg~~~i~~~~f~~~~~~~L 67 (484)
+++||||+|||++ ...||.+.+++=.-++.+.+..+
T Consensus 3 aiIlA~G~g~R~~plt~~~~K~ll~i~g~pli~~~l~~l 41 (401)
T 2ggo_A 3 AFILAAGSGERLEPITHTRPKAFVPILSKPLIEYQIEYL 41 (401)
T ss_dssp EEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHH
T ss_pred EEEEcCcCccccCcccCCCCcceeeECCEeHHHHHHHHH
Confidence 5679999999996 47899999874322445544444
No 118
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=52.07 E-value=6.2 Score=36.58 Aligned_cols=34 Identities=12% Similarity=0.024 Sum_probs=22.2
Q ss_pred eEEEEEeCCCCccccCCHHHHHHHH--HcCCceEEEEEE
Q psy10030 251 KHIHVYCVDNILVKVGDPTFLGYCV--EQGAHCGVKVVE 287 (484)
Q Consensus 251 ~~i~v~~vDN~l~~~~Dp~~lg~~~--~~~~~~~~~vv~ 287 (484)
++++|+++|+++. ++..+.... ..+.++++-+++
T Consensus 85 ~~~lv~~~D~P~~---~~~~i~~l~~~~~~~~~~~~~~~ 120 (232)
T 2dpw_A 85 GRVLVATGDIPHL---TEEAVRFVLDKAPEAALVYPIVP 120 (232)
T ss_dssp SEEEEEETTCTTC---CHHHHHHHHHHCCSCSEEEEEEE
T ss_pred CCEEEEeCCcccC---CHHHHHHHHhcCCCCCEEEEEee
Confidence 7899999999863 444443333 345666666665
No 119
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=20.05 E-value=2.1e+02 Score=27.33 Aligned_cols=32 Identities=22% Similarity=0.140 Sum_probs=23.0
Q ss_pred cCCeEEEEEeCCCCccccCCHHHHHHHHHcCC
Q psy10030 248 RGIKHIHVYCVDNILVKVGDPTFLGYCVEQGA 279 (484)
Q Consensus 248 ~G~~~i~v~~vDN~l~~~~Dp~~lg~~~~~~~ 279 (484)
...+-+++.+..|+.+.+.++.+..++.+.++
T Consensus 153 ~~~~~v~~~~p~nptG~~~~~~l~~~~~~~~~ 184 (370)
T 2z61_A 153 DKTKAIIINSPSNPLGEVIDREIYEFAYENIP 184 (370)
T ss_dssp SSEEEEEEESSCTTTCCCCCHHHHHHHHHHCS
T ss_pred cCceEEEEcCCCCCcCcccCHHHHHHHHHcCC
Confidence 35677888889999888888774455555554
Done!