BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10034
(399 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328712780|ref|XP_001945803.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon
pisum]
Length = 489
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 294/497 (59%), Positives = 336/497 (67%), Gaps = 114/497 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRTEKGG+P+++R+NQ+ RFK+ LVD V+E D KWRQ R KADN NK KNLC
Sbjct: 1 MVLDLDLFRTEKGGNPDQIRENQRKRFKDPSLVDNVVEADGKWRQLRFKADNLNKLKNLC 60
Query: 61 SKVIGE--KMKAKEP----------VGDSSTLP--------------------------- 81
SK IGE K K +P V D+ T+
Sbjct: 61 SKTIGEKIKSKEPQPKDGGDVAADFVLDTITVDVLKPLSVEQIKKVRVLIDNALTQNDKD 120
Query: 82 ---------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVD 126
N LH SVP+SN+E+EN +V T GD V+K+YSH+DLI MIDGVD
Sbjct: 121 LLDVEKTRNDSFKEISNFLHESVPLSNDEEENAVVATVGDCTVKKRYSHIDLIHMIDGVD 180
Query: 127 SEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLA 186
++AG V+G RGY+LKGPAV LQ LVQ AL +W +KGY PLYTPFFMRKE+MQEVAQLA
Sbjct: 181 ADAGTTVSGTRGYYLKGPAVFLQSALVQEALRRWDDKGYKPLYTPFFMRKEIMQEVAQLA 240
Query: 187 QFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
QFDEELYKVIGKG EKVGD LD+KYLIATSEQPI A+HRD WLPEAS PIRYLG
Sbjct: 241 QFDEELYKVIGKGSEKVGDH-----NLDEKYLIATSEQPIAALHRDQWLPEASFPIRYLG 295
Query: 246 VSTCFRQE-------------------------------------------------DLT 256
VSTCFRQE DL
Sbjct: 296 VSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPFDNQSWILFDEMINNSRQFYDDL- 354
Query: 257 KSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK 316
IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK
Sbjct: 355 -GIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK 413
Query: 317 KMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 376
KMNEK+++VHMLNATACATTRVICAILET+QTETG+++P+ L+K++P Y + EIPFV
Sbjct: 414 KMNEKVDYVHMLNATACATTRVICAILETYQTETGIKVPEILKKYLPTRYQD---EIPFV 470
Query: 377 KTAPIDEEETKKQKKQK 393
K+APIDEE+TKKQK +K
Sbjct: 471 KSAPIDEEDTKKQKNKK 487
>gi|91086675|ref|XP_968460.1| PREDICTED: similar to seryl-tRNA synthetase [Tribolium castaneum]
Length = 499
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 283/501 (56%), Positives = 327/501 (65%), Gaps = 110/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGG+P+K+R++QK RFK+V LVDKV+E D WRQ RHKADN NKFKNLC
Sbjct: 1 MVLDLDLFRTDKGGNPDKIRESQKKRFKDVTLVDKVVEADTTWRQLRHKADNLNKFKNLC 60
Query: 61 SKVIGEKMKAKE-------PVGD------------------------------------- 76
SK IG+KMK KE PV D
Sbjct: 61 SKEIGDKMKKKEPQGDANDPVPDSLVAQLENLTAELLKPLTVNQIKKVRVLIDEAMVKND 120
Query: 77 ----------SSTLP--GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
S+ L GN LH SV +S++ED N + RT GD E RKKYSHVDLI MIDG
Sbjct: 121 AELLRTEKERSAALKEIGNLLHDSVVISDDEDNNKVERTFGDCEFRKKYSHVDLIHMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
VD+E GA ++GGRGYFL GPA+ L+ L+Q AL +KGY PLYTPFFMRKE+MQEVAQ
Sbjct: 181 VDTERGATISGGRGYFLTGPALFLEHALIQLALRMLHKKGYKPLYTPFFMRKEIMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKVIGKG + E E+++KYLIATSEQPI A HRD W+ E++LPI+Y
Sbjct: 241 LSQFDEELYKVIGKGSE----KAEDKEIEEKYLIATSEQPIAAFHRDEWISESALPIKYA 296
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+STCFRQ E+ K+
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPFDNKSWEMMDEMINNAEEFCKAL 356
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YR+VNIVSGALN+AAAKKLDLEAWFP SGAFRELVSCSNCLDYQ+RRLLVRYGQTKK
Sbjct: 357 QIPYRIVNIVSGALNNAAAKKLDLEAWFPASGAFRELVSCSNCLDYQARRLLVRYGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN ++VHMLNAT CATTRVICAILE HQTETGV++P L+ F+P Y EIPFVK
Sbjct: 417 MNAATDYVHMLNATMCATTRVICAILEVHQTETGVKVPPVLKDFLPEEYRE---EIPFVK 473
Query: 378 TAPIDEEETKKQKKQKEGMKK 398
API+ E TKK KKQKEGMKK
Sbjct: 474 PAPIEVEATKKSKKQKEGMKK 494
>gi|270010395|gb|EFA06843.1| hypothetical protein TcasGA2_TC009786 [Tribolium castaneum]
Length = 529
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 283/501 (56%), Positives = 327/501 (65%), Gaps = 110/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGG+P+K+R++QK RFK+V LVDKV+E D WRQ RHKADN NKFKNLC
Sbjct: 1 MVLDLDLFRTDKGGNPDKIRESQKKRFKDVTLVDKVVEADTTWRQLRHKADNLNKFKNLC 60
Query: 61 SKVIGEKMKAKE-------PVGD------------------------------------- 76
SK IG+KMK KE PV D
Sbjct: 61 SKEIGDKMKKKEPQGDANDPVPDSLVAQLENLTAELLKPLTVNQIKKVRVLIDEAMVKND 120
Query: 77 ----------SSTLP--GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
S+ L GN LH SV +S++ED N + RT GD E RKKYSHVDLI MIDG
Sbjct: 121 AELLRTEKERSAALKEIGNLLHDSVVISDDEDNNKVERTFGDCEFRKKYSHVDLIHMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
VD+E GA ++GGRGYFL GPA+ L+ L+Q AL +KGY PLYTPFFMRKE+MQEVAQ
Sbjct: 181 VDTERGATISGGRGYFLTGPALFLEHALIQLALRMLHKKGYKPLYTPFFMRKEIMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKVIGKG + E E+++KYLIATSEQPI A HRD W+ E++LPI+Y
Sbjct: 241 LSQFDEELYKVIGKGSEKA----EDKEIEEKYLIATSEQPIAAFHRDEWISESALPIKYA 296
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+STCFRQ E+ K+
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPFDNKSWEMMDEMINNAEEFCKAL 356
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YR+VNIVSGALN+AAAKKLDLEAWFP SGAFRELVSCSNCLDYQ+RRLLVRYGQTKK
Sbjct: 357 QIPYRIVNIVSGALNNAAAKKLDLEAWFPASGAFRELVSCSNCLDYQARRLLVRYGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN ++VHMLNAT CATTRVICAILE HQTETGV++P L+ F+P Y EIPFVK
Sbjct: 417 MNAATDYVHMLNATMCATTRVICAILEVHQTETGVKVPPVLKDFLPEEYRE---EIPFVK 473
Query: 378 TAPIDEEETKKQKKQKEGMKK 398
API+ E TKK KKQKEGMKK
Sbjct: 474 PAPIEVEATKKSKKQKEGMKK 494
>gi|157108382|ref|XP_001650201.1| seryl-tRNA synthetase [Aedes aegypti]
gi|108879307|gb|EAT43532.1| AAEL005037-PA [Aedes aegypti]
Length = 500
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 278/485 (57%), Positives = 316/485 (65%), Gaps = 110/485 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR++KG DP KVR NQ+ RFK+V LVD VIE D +WR+ R ADNFNK KNLC
Sbjct: 1 MVLDLDLFRSDKGHDPAKVRANQELRFKDVGLVDTVIEQDGEWRKCRFNADNFNKLKNLC 60
Query: 61 SKVIGEKMKAK-------EPVG------------------------------DSSTLP-- 81
SK IGEKMK K EPV DS+ +
Sbjct: 61 SKEIGEKMKKKEPQGAEDEPVPEAVATDLLGLKSEDLKALTVNQIKKVRGLIDSAMVENE 120
Query: 82 -----------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
GNHLH SVPVSN+EDEN + RT GD E + KYSHVDLI MIDG
Sbjct: 121 KKLSEAEAKRNSALREVGNHLHESVPVSNDEDENKVERTFGDCEKKLKYSHVDLIVMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
++ E GA+V+GGRGYFL GPAV L+ L+Q++L KGYTPLYTPFFMRKEVMQEVAQ
Sbjct: 181 MNGEKGAVVSGGRGYFLTGPAVFLEQALIQHSLHLLYGKGYTPLYTPFFMRKEVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKV+GKG + E+ D+KYLIATSEQPI A HRD W+PEASLPI+Y
Sbjct: 241 LSQFDEELYKVVGKGSE----KTEEGVSDEKYLIATSEQPIAAYHRDEWIPEASLPIKYA 296
Query: 245 GVSTCFRQE-----------------------DLTK------------------------ 257
G+STCFRQE LT
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSL 356
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YRVVNIVSGALNHAA+KKLDLEAWF GSGAFRELVSCSNCLDYQ+RRLLVRYGQTKK
Sbjct: 357 GIPYRVVNIVSGALNHAASKKLDLEAWFAGSGAFRELVSCSNCLDYQARRLLVRYGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN ++FVHMLNAT CATTRVICAILETHQTETGV++P+ L+K++P Y + EIPFVK
Sbjct: 417 MNAAVDFVHMLNATMCATTRVICAILETHQTETGVKVPEPLKKYMPEQYRD---EIPFVK 473
Query: 378 TAPID 382
APID
Sbjct: 474 PAPID 478
>gi|383854318|ref|XP_003702668.1| PREDICTED: serine--tRNA ligase, cytoplasmic-like [Megachile
rotundata]
Length = 534
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 270/487 (55%), Positives = 313/487 (64%), Gaps = 109/487 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLD+FR +KG DP+K+R+NQ++RFK V+LVD VIE D WRQ RHKADN NK KN+C
Sbjct: 42 MVLDLDIFRKDKGFDPDKIRENQRNRFKEVKLVDTVIEKDKIWRQLRHKADNLNKLKNVC 101
Query: 61 SKVIGEKMKAKEPV-GD--------------------SSTLP------------------ 81
SK IGEKMK KE V GD S T+P
Sbjct: 102 SKEIGEKMKKKEAVDGDDTVSKDILENLDNLIPDNLKSLTVPQIKTIRSFIDDAIRKNDK 161
Query: 82 ----------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
GN LH SVP+SN+E+EN I RT GD +K+YSHVDLI MIDG+
Sbjct: 162 DLISTEFERNLALKEVGNILHESVPISNDEEENKIERTWGDCTQKKRYSHVDLIHMIDGI 221
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G ++GGRGYFL GPAV LQ L+QYAL + KGY PLYTPFFMRK+VMQEVAQL
Sbjct: 222 DGERGTNISGGRGYFLMGPAVFLQHALIQYALRQLFSKGYKPLYTPFFMRKDVMQEVAQL 281
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D E+++KYLIATSEQPI A HR+ W+PE +LPI+Y G
Sbjct: 282 SQFDEELYKVIGKGSEHNDDK----EIEEKYLIATSEQPIAAFHRNEWIPENTLPIKYAG 337
Query: 246 VSTCFRQE-----------------------------------------------DLTKS 258
+STCFRQE T
Sbjct: 338 LSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPFDNKSWQMMEEMISNAEEFYKTLE 397
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YR+VNIVSGALN+AA+KKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTKKM
Sbjct: 398 IPYRIVNIVSGALNNAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKM 457
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N ++VHMLNAT CA TRVICAILE HQT+TG++IP+ L +F+P Y EIPFVK
Sbjct: 458 NASTDYVHMLNATMCAVTRVICAILEVHQTDTGIKIPNILAEFMPVEY---RTEIPFVKP 514
Query: 379 APIDEEE 385
APIDE E
Sbjct: 515 APIDETE 521
>gi|357606091|gb|EHJ64911.1| hypothetical protein KGM_16833 [Danaus plexippus]
Length = 494
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 273/488 (55%), Positives = 312/488 (63%), Gaps = 112/488 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +K GDPEK+R+NQ+ RFK+V LVD V+E D WR+ RH ADN NK KN+C
Sbjct: 1 MVLDLDLFRADKDGDPEKIRENQRKRFKDVALVDTVVEQDTLWRKLRHDADNLNKLKNVC 60
Query: 61 SKVIGEKMKAKEPVGDSST------------LPGNHLHP--------------------- 87
SK IG+KMK+KEPVG L G L P
Sbjct: 61 SKEIGQKMKSKEPVGAEDEAVPQEIADNLIYLTGEQLRPLTVNQIKKVRVMIDEAIMKNE 120
Query: 88 -----------------------SVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
SVPV ++ED N + RT GD R+KYSHVDLI MIDG
Sbjct: 121 QALVAAEKTRSAALREVGNHLHESVPVDDDEDHNAVERTFGDCSFRQKYSHVDLICMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+D E GA V+GGRGY+LKGPAV L+ LVQ +L +E+GYTPLYTPFFM+KEVMQEVAQ
Sbjct: 181 MDGERGAAVSGGRGYYLKGPAVFLEQALVQLSLRMLLERGYTPLYTPFFMKKEVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRY 243
LAQFDEELYKVIGKG E GDSA +++KYLIATSEQPI A HRD WLPEASLPI+Y
Sbjct: 241 LAQFDEELYKVIGKGSENKGDSA-----VEEKYLIATSEQPIAAYHRDEWLPEASLPIKY 295
Query: 244 LGVSTCFRQ---------------------------------------------EDLTKS 258
G+STCFRQ ED +S
Sbjct: 296 AGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWVMMEEMIKNAEDFYQS 355
Query: 259 --IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK 316
I YRVVNIVSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNCL+YQ+RRLLVRYGQTK
Sbjct: 356 LGIPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTK 415
Query: 317 KMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 376
KMN E+VHMLNAT CATTRVICAILE +QTE GV++P+ L+ ++P Y IPFV
Sbjct: 416 KMNAATEYVHMLNATMCATTRVICAILEVNQTEEGVKVPEALKLWMPEQYQE---LIPFV 472
Query: 377 KTAPIDEE 384
K APID E
Sbjct: 473 KPAPIDLE 480
>gi|148231408|ref|NP_001080487.1| seryl-tRNA synthetase [Xenopus laevis]
gi|27697084|gb|AAH43975.1| Sars-prov protein [Xenopus laevis]
Length = 510
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/499 (53%), Positives = 318/499 (63%), Gaps = 108/499 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGG+PE +R+ Q+ RFK+ LVD ++ +D WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFREDKGGNPELIRETQRKRFKDPGLVDALLNSDTAWRKCRFQADNLNKQKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP--------------------------------------- 81
SK+IGEKMK KEP+GDS LP
Sbjct: 61 SKIIGEKMKKKEPLGDSDVLPENIQLDQLTAEILSALSVTQIKRLRVLIDEAITATDSER 120
Query: 82 --------------GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVD 126
GN LHP+VP+SN+ED +N + RT GD EV+K+YSHVDL+ M+DG +
Sbjct: 121 IKLEGERFESLREIGNLLHPTVPISNDEDNDNKVERTWGDCEVQKRYSHVDLVVMVDGFE 180
Query: 127 SEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLA 186
E GA+VAG RGYFLKGP V L+ L+Q AL EKGYTP+YTPFFMRKEVMQEVAQL+
Sbjct: 181 GEKGAVVAGSRGYFLKGPLVFLEQALIQLALHTLAEKGYTPIYTPFFMRKEVMQEVAQLS 240
Query: 187 QFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGV 246
QFDEELYKVIGK + D + +D+KYLIATSEQPI A+HRD WL LPIRY G+
Sbjct: 241 QFDEELYKVIGKSSEKSDD----NSIDEKYLIATSEQPIAALHRDEWLKPEDLPIRYAGL 296
Query: 247 STCFRQE-----DLTKSI------------------------------------------ 259
STCFRQE T+ I
Sbjct: 297 STCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMLEEMIMTAESFYQMLGI 356
Query: 260 AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMN 319
YR+VNIVSG+LNHAA+KKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 PYRIVNIVSGSLNHAASKKLDLEAWFPGSSAFRELVSCSNCTDYQARRLRIRYGQTKKMM 416
Query: 320 EKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTA 379
+K+EFVHMLNAT CATTRVICAILE +QTE G+ IP+ LR F+P + I FVK A
Sbjct: 417 DKVEFVHMLNATMCATTRVICAILENYQTEEGIVIPEKLRDFMPPGLKD---IIKFVKPA 473
Query: 380 PIDEEETKKQKKQKEGMKK 398
PID+E +KKQKKQ+E KK
Sbjct: 474 PIDQELSKKQKKQQERGKK 492
>gi|417402105|gb|JAA47908.1| Putative seryl-trna synthetase [Desmodus rotundus]
Length = 512
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 270/500 (54%), Positives = 319/500 (63%), Gaps = 109/500 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP+ +R+ QK RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPDLIRETQKKRFKDPGLVDQLVKADGEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGD---------------SSTLP------------------------ 81
SK IGEKMK KEPVGD S TL
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENILNLEDITSDTLANLKVSQIKKLRLLIDEAILKCDAE 120
Query: 82 ---------------GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E G +VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGTVVAGSRGYFLKGALVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NTYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKSIA 260
+STCFRQ ED +S+
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLG 356
Query: 261 --YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 VPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTETG+ +P+ LR+F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTETGIVVPEKLREFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKK 398
APID+E +KKQKKQ EG KK
Sbjct: 474 APIDQEPSKKQKKQHEGGKK 493
>gi|380025542|ref|XP_003696530.1| PREDICTED: serine--tRNA ligase, cytoplasmic-like [Apis florea]
Length = 496
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 269/487 (55%), Positives = 308/487 (63%), Gaps = 109/487 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KG DP+K+R+NQK RFK+V LVD VIE D WRQ RHKADN NK KN+C
Sbjct: 1 MVLDLDLFRKDKGFDPDKIRENQKKRFKDVGLVDTVIEKDKIWRQLRHKADNLNKLKNVC 60
Query: 61 SKVIGEKMKAKEPV-GDSST-----------LPGNH------------------------ 84
SK IGEKMK KE V GD + +P N
Sbjct: 61 SKEIGEKMKKKEAVDGDDAVSKDILENLENLVPNNLKSLTVAQIKTVRSFIDDAIRTNDK 120
Query: 85 -------------------LHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
LH SVP+SN+E+EN + RT GD +KKYSHVDLI MIDG+
Sbjct: 121 SLILIESERNHALKEIGNILHESVPISNDEEENKVERTYGDCMQKKKYSHVDLIHMIDGI 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G V+GGRGYFL GPAV LQ L+Q AL K GY PLYTPFFMRK+VMQEVAQL
Sbjct: 181 DGERGTTVSGGRGYFLIGPAVFLQHALIQLALRKLYINGYKPLYTPFFMRKDVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + E E+++KYLIATSEQPI A HR+ W+PE LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSERN----EDKEIEEKYLIATSEQPIAAFHRNEWIPENILPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ KS
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPYDNKSWQMMEEMILNAEEFYKSLE 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YR+VNIVSGALN+AA+KKLDLEAWFPGS AFRELVSCSNCLDYQ+RRLLVRYGQTKKM
Sbjct: 357 IPYRIVNIVSGALNNAASKKLDLEAWFPGSNAFRELVSCSNCLDYQARRLLVRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N ++VHMLNAT CA TRVICAILE HQT+TG+++P L +F+P Y N EIPFVK
Sbjct: 417 NANTDYVHMLNATMCAVTRVICAILEVHQTDTGIKVPKVLAQFMPMEYEN---EIPFVKP 473
Query: 379 APIDEEE 385
APIDE E
Sbjct: 474 APIDETE 480
>gi|66509916|ref|XP_396462.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like isoform 1 [Apis
mellifera]
Length = 496
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 268/487 (55%), Positives = 308/487 (63%), Gaps = 109/487 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KG DP+K+R+NQK RFK+V LVD VIE D WRQ RHKADN NK KN+C
Sbjct: 1 MVLDLDLFRKDKGFDPDKIRENQKKRFKDVGLVDTVIEKDKIWRQLRHKADNLNKLKNVC 60
Query: 61 SKVIGEKMKAKEPV-GDSST-----------LPGNH------------------------ 84
SK IGEKMK KE + GD + +P N
Sbjct: 61 SKEIGEKMKKKEAIDGDDTVSKDILENLENLIPNNLKSLTVAQIKTVRSFIDDAIRTNDK 120
Query: 85 -------------------LHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
LH SVP+SN+E+EN + RT GD +KKYSHVDLI MIDG+
Sbjct: 121 NLILIEFERNHALKEIGNILHESVPISNDEEENKVERTYGDCMQKKKYSHVDLIYMIDGI 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G V+GGRGYFL GPAV LQ L+Q AL K GY PLYTPFFMRK+VMQEVAQL
Sbjct: 181 DGERGTTVSGGRGYFLIGPAVFLQHALIQLALRKLYINGYKPLYTPFFMRKDVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + E E+++KYLIATSEQPI A HR+ W+PE LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSERN----EDKEIEEKYLIATSEQPIAAFHRNEWIPENILPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ KS
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPYDNKSWQMMEEMISNAEEFYKSLE 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YR+VNIVSGALN+AA+KKLDLEAWFPGS AFRELVSCSNCLDYQ+RRLLVRYGQTKKM
Sbjct: 357 IPYRIVNIVSGALNNAASKKLDLEAWFPGSNAFRELVSCSNCLDYQARRLLVRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N ++VHMLNAT CA TRVICAILE HQT+TG+++P L +F+P Y N EIPFVK
Sbjct: 417 NANTDYVHMLNATMCAVTRVICAILEVHQTDTGIKVPKVLAQFMPMEYEN---EIPFVKP 473
Query: 379 APIDEEE 385
APIDE E
Sbjct: 474 APIDETE 480
>gi|260814103|ref|XP_002601755.1| hypothetical protein BRAFLDRAFT_121181 [Branchiostoma floridae]
gi|229287057|gb|EEN57767.1| hypothetical protein BRAFLDRAFT_121181 [Branchiostoma floridae]
Length = 512
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 266/486 (54%), Positives = 305/486 (62%), Gaps = 108/486 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR ++GGDP K+R+NQ R+K+V LVD V++ D +WR+ R++AD N+ KNLC
Sbjct: 1 MVLDLDLFRVDRGGDPNKIRENQSKRYKDVTLVDNVVQADEQWRKLRYQADTLNRLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDS--STLP------------------------------------- 81
SK IGEKMK KEPVG+ STL
Sbjct: 61 SKTIGEKMKKKEPVGEESESTLTEDELEKLTPEALQAMTVNQIKQIRTIIDKSIVQNTAG 120
Query: 82 ---------------GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLITMIDGV 125
GN LH VP+SN+EDE N RT GD VRKKYSHVDLITMIDG
Sbjct: 121 RAEVEKQRQESLKEIGNILHADVPISNDEDEDNRTERTNGDCTVRKKYSHVDLITMIDGY 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E GA+ AG RGY+++G AV L+ L+QYAL EKGYT LYTPFFM+K+VM EVAQL
Sbjct: 181 DGERGAVTAGSRGYYMRGIAVFLEQALIQYALRILYEKGYTALYTPFFMKKDVMSEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFD+ELYKVIGKG + GD E D KYLIATSEQPI A HRD W+ LPI+Y G
Sbjct: 241 SQFDDELYKVIGKGSEKGDDQTE----DVKYLIATSEQPIAAYHRDEWMKPEELPIKYAG 296
Query: 246 VSTCFRQE------DL---------------------------------------TKSIA 260
+STCFRQE D T I
Sbjct: 297 ISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLSKPDDSWGLFHEMIGNAEEFYKTLGIP 356
Query: 261 YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE 320
YR+VNIVSGALN+AAA K DLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTKKMNE
Sbjct: 357 YRIVNIVSGALNNAAAMKYDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNE 416
Query: 321 KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
K EFVHMLNAT CATTRVICAILE HQTE G+ IP+ LR+F+P IPFVK AP
Sbjct: 417 KPEFVHMLNATMCATTRVICAILENHQTEEGIVIPEVLRQFMPGAIEF----IPFVKPAP 472
Query: 381 IDEEET 386
I+E+ T
Sbjct: 473 IEEQAT 478
>gi|156552806|ref|XP_001599572.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Nasonia
vitripennis]
Length = 494
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 276/501 (55%), Positives = 319/501 (63%), Gaps = 110/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKN-- 58
MVLDLDLFR +KG DP+KVR+NQ+ RFK+V LVD VIE D WRQ RH+ADN NK KN
Sbjct: 1 MVLDLDLFREDKGFDPKKVRENQEKRFKDVGLVDTVIEKDKLWRQLRHRADNLNKLKNLC 60
Query: 59 ---------------------------LCSKVIGEKMKA--------------------- 70
L ++V + +KA
Sbjct: 61 SKVIGEKMKKKEPVGDDDSVPQSIADDLDAQVTSDNLKALTVTQIKRIRTLIDEAIAGND 120
Query: 71 ----KEPVGDSSTLP--GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
K +S L GNHLH SVPVSN+E+EN + RT GDT RKKYSHVDLI MIDG
Sbjct: 121 QDLVKTEAQRNSALREVGNHLHQSVPVSNDEEENKVERTFGDTTQRKKYSHVDLIHMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+D E GA V+GGRGYFL G AV L+ L+Q AL K +KGY PLYTPFFMRK+ MQEVAQ
Sbjct: 181 MDGERGAAVSGGRGYFLTGAAVFLEHALIQLALRKLFDKGYKPLYTPFFMRKDAMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKVIGKG + GD + EL++KYLIATSEQPI A HR W+PEA+LPIRY
Sbjct: 241 LSQFDEELYKVIGKGSEKGD----EKELEEKYLIATSEQPIAAYHRGEWIPEATLPIRYA 296
Query: 245 GVSTCFRQ---------------------------------------------EDLTK-- 257
G+STCFRQ ED +
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPHDNKSWEMMEEMIRNAEDFYQEL 356
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
+I YR+VNIVSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTKK
Sbjct: 357 NIPYRIVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN ++VHMLNAT CA TRVICA+LE +QTETG+++P + +F+P Y EIPFVK
Sbjct: 417 MNASTDYVHMLNATMCAVTRVICAVLEINQTETGIKVPKAIAQFMPTQYQE---EIPFVK 473
Query: 378 TAPIDEEETKKQKKQKEGMKK 398
APIDE E KKQKKQKE M K
Sbjct: 474 PAPIDEVEIKKQKKQKENMNK 494
>gi|125986127|ref|XP_001356827.1| GA14420 [Drosophila pseudoobscura pseudoobscura]
gi|195148460|ref|XP_002015192.1| GL19573 [Drosophila persimilis]
gi|54645153|gb|EAL33893.1| GA14420 [Drosophila pseudoobscura pseudoobscura]
gi|194107145|gb|EDW29188.1| GL19573 [Drosophila persimilis]
Length = 501
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/487 (54%), Positives = 311/487 (63%), Gaps = 110/487 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR++KGG+P VR NQK RFK+V LV+ VIE D +WRQ RH+ADN NK KN+C
Sbjct: 1 MVLDLDLFRSDKGGNPNAVRDNQKKRFKDVALVETVIEKDTEWRQCRHRADNLNKVKNVC 60
Query: 61 SKV-------------IGEKMKAKEPVGDSSTLP-------------------------- 81
SKV + E++ A + +P
Sbjct: 61 SKVIGEKMKKKEPVGAVSEELPAAVTTSLTEIVPETLQPLTVNQIKQLRVLIDDAMTENQ 120
Query: 82 -----------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
GNHLH SVPVSN+E+EN + RT GD E R KYSHVDLI MIDG
Sbjct: 121 KSLELAEQTRNTSLREVGNHLHDSVPVSNDEEENRVERTFGDCEKRGKYSHVDLIVMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+++E G++V+GGRGYFL G AV L+ L+Q+AL K Y PLYTPFFMRKEVMQEVAQ
Sbjct: 181 MNAEKGSVVSGGRGYFLTGAAVFLEQALIQHALHLLYAKDYVPLYTPFFMRKEVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKV+GKG + + A D+KYLIATSEQPI A HRD WLPEASLPI+Y
Sbjct: 241 LSQFDEELYKVVGKGSEKAEEAG----TDEKYLIATSEQPIAAYHRDEWLPEASLPIKYA 296
Query: 245 GVSTCFRQE-----------------------DLTK------------------------ 257
G+STCFRQE LT
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSL 356
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YRVVNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVR+GQTKK
Sbjct: 357 GIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN +++VHMLNAT CA TRVICAILETHQTETG+++P+ L+K++PA + + EIPFVK
Sbjct: 417 MNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKFQD---EIPFVK 473
Query: 378 TAPIDEE 384
APID E
Sbjct: 474 PAPIDLE 480
>gi|328670885|gb|AEB26319.1| seryl-tRNA synthetase [Helicoverpa armigera]
Length = 491
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/488 (54%), Positives = 310/488 (63%), Gaps = 112/488 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +K G+P+K+R+NQK RFK+V LVD V+E D WR+ RH+ADN+NK KN+C
Sbjct: 1 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDTVVEQDTLWRRLRHEADNYNKLKNVC 60
Query: 61 SKVIGEKMKAKEPVGDSST------------LPGNHLHP--------------------- 87
SK IG KMK+KEPVG L G+ L P
Sbjct: 61 SKEIGLKMKSKEPVGPEDQPVPAEIAEKLVDLTGDDLKPLTVNQIKKVRVLIDEAIAKNE 120
Query: 88 -----------------------SVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
SVPV ++ED N + RT GD R KYSHVDLI MIDG
Sbjct: 121 QGLIAAEKARSAALREVGNHLHESVPVDDDEDHNKVERTHGDCTFRTKYSHVDLICMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+D + G+ VAGGRGY+LKG AV L+ L+Q +L ++KGYTPLYTPFFMRKEVMQEVAQ
Sbjct: 181 MDGDRGSAVAGGRGYYLKGAAVFLEQALIQLSLRILLKKGYTPLYTPFFMRKEVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRY 243
LA FDEELYKV+GKG E GD A +++KYLIATSEQPI A HRD WLPEASLPIRY
Sbjct: 241 LAHFDEELYKVVGKGSENKGDVA-----IEEKYLIATSEQPIAAYHRDEWLPEASLPIRY 295
Query: 244 LGVSTCFRQE-----------------------DLTK----------------------- 257
G+STCFRQE LT
Sbjct: 296 AGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMITNAEEFYQL 355
Query: 258 -SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK 316
I YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCL+YQ+RRLLVRYGQTK
Sbjct: 356 LDIPYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTK 415
Query: 317 KMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 376
KMN E+VHMLNAT CATTRVICA+LE +QTE G+++P+ L++++P Y IPFV
Sbjct: 416 KMNAATEYVHMLNATMCATTRVICAVLEVNQTEEGIKVPEALKQWMPEQYQE---LIPFV 472
Query: 377 KTAPIDEE 384
K APID E
Sbjct: 473 KPAPIDVE 480
>gi|47498044|ref|NP_998852.1| seryl-tRNA synthetase [Xenopus (Silurana) tropicalis]
gi|45708834|gb|AAH67920.1| seryl-aminoacyl-tRNA synthetase 1 [Xenopus (Silurana) tropicalis]
gi|89269852|emb|CAJ83597.1| seryl-tRNA synthetase [Xenopus (Silurana) tropicalis]
Length = 511
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/489 (53%), Positives = 311/489 (63%), Gaps = 112/489 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGG+PE +R+ Q+ RFK+ LVD ++ +D WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFREDKGGNPELIRETQRKRFKDPGLVDALLNSDTAWRKCRFQADNLNKQKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP--------------------------------------- 81
SK+IGEKMK KEP+GDS LP
Sbjct: 61 SKIIGEKMKKKEPLGDSDVLPENIQLDQLTAEVLSALSVTQIKRLRVLIDEAIAATDTER 120
Query: 82 --------------GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVD 126
GN LHP+VP+SN+ED +N + RT GD EVRK+YSHVDL+ M+DG +
Sbjct: 121 IKLEAERFESLREIGNLLHPTVPISNDEDNDNKVERTWGDCEVRKRYSHVDLVVMVDGFE 180
Query: 127 SEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLA 186
E GA+VAG RGYFLKGP V L+ L+Q+AL EK YTP+YTPFFMRKEVMQEVAQL+
Sbjct: 181 GEKGAVVAGSRGYFLKGPLVFLEQALIQFALHTLAEKQYTPIYTPFFMRKEVMQEVAQLS 240
Query: 187 QFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGV 246
QFDEELYKVIGKG + D + +D+KYLIATSEQPI A+HRD WL LP+RY G+
Sbjct: 241 QFDEELYKVIGKGSEKSDD----NSIDEKYLIATSEQPIAALHRDEWLKPEELPLRYAGI 296
Query: 247 STCFRQE----------------------------DLTKS-------------------I 259
STCFRQE + KS I
Sbjct: 297 STCFRQEVGSHGRDTRGIFRVHQFEKIEQFIYASPNDNKSWELFEEMIMTAESFYQKLGI 356
Query: 260 AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMN 319
YR+VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 PYRIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMM 416
Query: 320 EKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPA--VYVNEAGEIPFVK 377
+K+EFVHMLNAT CATTR ICAILE +QTE G+ IP+ LR F+P Y+ I FVK
Sbjct: 417 DKVEFVHMLNATMCATTRAICAILENYQTEEGIIIPEKLRDFMPPGLNYI-----IKFVK 471
Query: 378 TAPIDEEET 386
APID+E T
Sbjct: 472 PAPIDQELT 480
>gi|332374480|gb|AEE62381.1| unknown [Dendroctonus ponderosae]
Length = 492
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/485 (55%), Positives = 308/485 (63%), Gaps = 110/485 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDP+K+R QK R+K+V LVD+V+ D WRQ RHKADN+NK KN+C
Sbjct: 1 MVLDLDLFRTDKGGDPDKIRAIQKKRYKDVGLVDEVVAKDTLWRQLRHKADNWNKLKNVC 60
Query: 61 SKVI------------GEKMKAKEPVG--DSSTLP------------------------- 81
SK I GE+ +E DS TL
Sbjct: 61 SKAIGEKMKNKVAQVEGEQSALEEVTAQLDSLTLDTLKPLSVAQIKKVRTLIDEAVLSND 120
Query: 82 -----------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
GN LH SVPV +NED N + RT GD E+RKKYSHVDLI MIDG
Sbjct: 121 SELLRAEKKRNEVLKEIGNLLHESVPVDDNEDNNKVERTFGDCEIRKKYSHVDLICMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
VD+E G +V+GGRGY+L GPAV L+ LVQ+AL + + KGY PLYTPFFM+KE+MQEVAQ
Sbjct: 181 VDTERGTVVSGGRGYYLTGPAVFLEQALVQFALRQLLVKGYKPLYTPFFMKKEIMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKVIGK + +S E+D+KYLIATSEQPI A HRD WLPE+ LPIRY
Sbjct: 241 LSQFDEELYKVIGKSSENAESK----EVDEKYLIATSEQPIAAFHRDEWLPESVLPIRYA 296
Query: 245 GVSTCFRQED-----------------------LTK------------------------ 257
G+STCFRQE LT
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPFDNKSWEMMDEMIGNAEAFYQAL 356
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YRVVNIVSGALN+AA+KKLDLEAWFPGSGAFRELVSCSNCL+YQ+RRLLVRYGQTKK
Sbjct: 357 EIPYRVVNIVSGALNNAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN ++VHMLNAT CATTRVICAILE HQTE G+R+P LR F+P Y + I FVK
Sbjct: 417 MNAATDYVHMLNATMCATTRVICAILEVHQTEEGIRVPAGLRDFLPEPYRD---LIRFVK 473
Query: 378 TAPID 382
APID
Sbjct: 474 PAPID 478
>gi|432103916|gb|ELK30749.1| Seryl-tRNA synthetase, cytoplasmic [Myotis davidii]
Length = 491
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/478 (53%), Positives = 314/478 (65%), Gaps = 86/478 (17%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDP+++R+ QK+RFK+ LVD++++ D +WR+ R + DN NK KNLC
Sbjct: 1 MVLDLDLFRTDKGGDPDRIRETQKNRFKDPGLVDRLVKADGEWRKCRFQTDNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLH---------PSVPVSN------------------ 93
SK IGEKMK KEPVG+ ++P N L+ ++ VS
Sbjct: 61 SKTIGEKMKKKEPVGNDESIPENLLNLDDLTSDTLANLKVSQIKKLRLLIDEAILKCDAQ 120
Query: 94 ----NED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
ED +N + R GD V+KKYSHVDL+ M+DG + E G +VAG RGYFLKGP V L
Sbjct: 121 RIKLQEDADNKVERIWGDCTVKKKYSHVDLVVMVDGFEGEKGVVVAGSRGYFLKGPLVFL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG + D
Sbjct: 181 EQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDD--- 237
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
+ D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQE
Sbjct: 238 -NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVH 296
Query: 254 --------------------------------DLTKSIAYRVVNIVSGALNHAAAKKLDL 281
T I Y +VNIVSG+LNHAA+KKLDL
Sbjct: 297 QFEKIEQFVYASPHDNKSWEMFEEMISTAEEFYQTLGIPYHIVNIVSGSLNHAASKKLDL 356
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K+EFVHMLNAT CATTR ICA
Sbjct: 357 EAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICA 416
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
ILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ+EG K K
Sbjct: 417 ILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQQEGSKNK 471
>gi|322792298|gb|EFZ16282.1| hypothetical protein SINV_03374 [Solenopsis invicta]
Length = 493
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 273/500 (54%), Positives = 313/500 (62%), Gaps = 109/500 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFK--- 57
MVLDLD FR +KG DPEK+R NQK RFK+V+LVD VIE D WRQ RH+ADNFNK K
Sbjct: 1 MVLDLDFFRKDKGFDPEKIRDNQKKRFKDVQLVDTVIEKDKYWRQLRHRADNFNKLKNLC 60
Query: 58 -----------------------------NLCSKVI----------------------GE 66
NL S+ + E
Sbjct: 61 SKEIGEKMKKKEPLGDDDTVPQAITDDLDNLTSESLKMLTVTQIKRIRTLIDEAIQKNDE 120
Query: 67 KMKAKEPVGDSSTLP-GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
+KA E +++ GNHLH SVPVS +E+EN + RT GD +KKYSHVDLI MIDG+
Sbjct: 121 NLKATELERNNALREVGNHLHESVPVSEDEEENKVERTWGDCSFKKKYSHVDLIHMIDGM 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G V+GGRGYFL GPAV LQ L+Q AL K +KGY PLYTPF MRK+ MQEVAQL
Sbjct: 181 DGERGTGVSGGRGYFLTGPAVLLQQALIQLALRKLFKKGYKPLYTPFTMRKDAMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + E E+++KYLIATSEQPI A HR WL E +LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSERN----EDKEMEEKYLIATSEQPIAAFHRGEWLAENTLPIKYAG 296
Query: 246 VSTCFRQED-----------------------LTK------------------------S 258
+STCFRQE LT
Sbjct: 297 ISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPHDNKSWEMMEEMISNAEEFYQALD 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YR+VNIVSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTKKM
Sbjct: 357 IPYRIVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N ++VHMLNAT CA TRVICAILE HQTETG+++P L ++P+ Y N EIPFVK
Sbjct: 417 NTTTDYVHMLNATMCAVTRVICAILEVHQTETGIKVPKILADYMPSEYEN---EIPFVKV 473
Query: 379 APIDEEETKKQKKQKEGMKK 398
APIDE ETKKQKKQKE + K
Sbjct: 474 APIDEIETKKQKKQKENVSK 493
>gi|307213057|gb|EFN88588.1| Seryl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
Length = 493
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 274/500 (54%), Positives = 313/500 (62%), Gaps = 109/500 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFK--- 57
MVLDLDLFR +KG DPEK+R NQK RFK+V+LVD VIE D WRQ RH ADNFNK K
Sbjct: 1 MVLDLDLFRKDKGFDPEKIRDNQKRRFKDVQLVDTVIEKDKHWRQLRHCADNFNKLKNLC 60
Query: 58 -----------------------------NLCSKVI----------------------GE 66
NL S+ + E
Sbjct: 61 SKEIGEKMKKKEPLGDDDTVPQAIADDLDNLTSESLKALTVVQIKRIRTLIDEAIQKNDE 120
Query: 67 KMKAKEPVGDSSTLP-GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
+K E +S+ GNHLH SVPV++NE+EN + RT GD V+KKYSHVDLI MIDG+
Sbjct: 121 SLKTTESERNSALREVGNHLHESVPVTDNEEENKVERTWGDCSVKKKYSHVDLIHMIDGM 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G V+GGRGYFL GPAV LQ GL Q AL K EKGY PLYTPF MRK+ MQEVAQL
Sbjct: 181 DGERGTGVSGGRGYFLTGPAVFLQQGLNQLALRKLFEKGYKPLYTPFIMRKDAMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + E EL++KYLIATSEQPI A HR W+ E++LPIRY G
Sbjct: 241 SQFDEELYKVIGKGSERN----EDKELEEKYLIATSEQPIAAFHRGEWIAESALPIRYAG 296
Query: 246 VSTCFRQED-----------------------LTK------------------------S 258
+STCFRQE LT +
Sbjct: 297 ISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPHDNKSWEMMEEMISNAEEFYQALN 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YR+VNIVSGALNHAA+KKLDLEAWFPGS AFRELVSCSNCLDYQ+RRLLVRYG+TKKM
Sbjct: 357 IPYRIVNIVSGALNHAASKKLDLEAWFPGSRAFRELVSCSNCLDYQARRLLVRYGKTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N ++VHMLNAT CA TRVICAILE HQTETGV++P+ L ++P Y +IPFVK
Sbjct: 417 NTTTDYVHMLNATMCAVTRVICAILEVHQTETGVKVPEILMDYMPLGY---KKQIPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKK 398
API+E ETKKQKKQKE K
Sbjct: 474 APINEVETKKQKKQKENASK 493
>gi|321471906|gb|EFX82878.1| hypothetical protein DAPPUDRAFT_187913 [Daphnia pulex]
Length = 490
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 257/488 (52%), Positives = 305/488 (62%), Gaps = 110/488 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+DLFR +KGGDPEK+R+NQ+ R+K+V+LVD ++E D +WRQ R + D NK KN
Sbjct: 1 MVLDIDLFRADKGGDPEKMRENQRKRYKDVKLVDLIVEKDNQWRQLRFQLDQLNKLKNSA 60
Query: 61 SKVIGEKMKAKEPVGD------------SSTLPG-------------------------- 82
SK IGEKMK KEPVGD S +L G
Sbjct: 61 SKEIGEKMKKKEPVGDDVLPDGLEEIMASMSLTGEQLKPLTVNQIKKVSSMMDKAIVEAN 120
Query: 83 ------------------NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
NHLHPS VS+NEDEN + RT GD RKKYSHVDLI M++G
Sbjct: 121 KKLDDTEKERNAGLREMGNHLHPSCHVSDNEDENVVERTFGDCASRKKYSHVDLIHMVEG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+D+E G + AGGRGY+L GP V L+ L+Q AL K Y + TPFFMRK++MQ+VAQ
Sbjct: 181 MDAERGTVTAGGRGYYLLGPMVFLEQALIQLALRILQTKSYIAMGTPFFMRKDIMQDVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFD+ELYKVIGKG + E E+D+KYLIATSEQPI A HRD W+ E+ LP RY
Sbjct: 241 LSQFDDELYKVIGKGSE----KAEDKEVDEKYLIATSEQPIAAFHRDEWMKESELPKRYA 296
Query: 245 GVSTCFRQE------------------------------DLT-----------------K 257
G+STCFRQE +L+
Sbjct: 297 GISTCFRQEVGSHGRDTRGIFRVHQFQKVEQFCITSPHDNLSWQMMDEMIGNAEAFYQAL 356
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
+I YR+VNIVSGALN+AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL+RYGQTKK
Sbjct: 357 NIPYRIVNIVSGALNNAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLIRYGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN ++VHMLNAT CATTRVICAILE +QT TG+ IP+ L+ F+P Y A EIPF K
Sbjct: 417 MNATTDYVHMLNATMCATTRVICAILELNQTATGIVIPEVLKPFMPPAY---AEEIPFTK 473
Query: 378 TAPIDEEE 385
APIDE E
Sbjct: 474 PAPIDELE 481
>gi|51468022|ref|NP_001003882.1| seryl-tRNA synthetase, cytoplasmic [Danio rerio]
gi|49619145|gb|AAT68157.1| seryl-tRNA synthetase [Danio rerio]
gi|51980615|gb|AAH81608.1| Seryl-tRNA synthetase [Danio rerio]
gi|260763742|dbj|BAI44434.1| seryl-tRNA synthetase [Danio rerio]
Length = 515
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 260/484 (53%), Positives = 296/484 (61%), Gaps = 109/484 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDPE +R+ Q+ RFK+V LVDK+++ D +WR+ R ADN NK KNLC
Sbjct: 1 MVLDLDLFRTDKGGDPEIIRETQRKRFKDVSLVDKLVQADTEWRKCRFTADNLNKAKNLC 60
Query: 61 SKVIGEKMKAKEPVG------------------------------------------DSS 78
SK IGEKMK KEPVG DS
Sbjct: 61 SKSIGEKMKKKEPVGDDDTLPEEAQNLEALTAETLSPLTVTQIKKVRVLVDEAVQKTDSD 120
Query: 79 TLP------------GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
L GN LHPSVP+SN+ED +N + RT GD V+KKYSHVDL+ M+DG
Sbjct: 121 RLKLEAERFEYLREIGNLLHPSVPISNDEDADNKVERTWGDCTVQKKYSHVDLVVMVDGY 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GAIVAG RGYFLKGP V L+ L+ YAL K Y LYTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAIVAGSRGYFLKGPLVFLEQALINYALRILYSKNYNLLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + +D+KYLIATSEQPI A RD WL LPIRY G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NTVDEKYLIATSEQPIAAFLRDEWLKPEELPIRYAG 296
Query: 246 VSTCFRQE-----------------------------------------------DLTKS 258
+STCFRQE T
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMIGTAESFYQTLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YR+VNIVSGALNHAA+KKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYRIVNIVSGALNHAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K EFVHMLNAT CATTRVICAILE QTE G+ +P+ L+ F+P I FVK
Sbjct: 417 MDKAEFVHMLNATMCATTRVICAILENFQTEEGIIVPEPLKAFMPPGLTE---IIKFVKP 473
Query: 379 APID 382
APID
Sbjct: 474 APID 477
>gi|58389688|ref|XP_317207.2| AGAP008265-PA [Anopheles gambiae str. PEST]
gi|55237426|gb|EAA12316.2| AGAP008265-PA [Anopheles gambiae str. PEST]
Length = 503
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/488 (53%), Positives = 302/488 (61%), Gaps = 109/488 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR++KG DPEK+R+NQ RFK+V LV+ VIE D +WR+ R DN+NK KNLC
Sbjct: 1 MVLDLDLFRSDKGHDPEKIRENQTKRFKDVALVETVIEQDKEWRRCRFNMDNYNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSS--------------------TLPGNHLHP-----SVPVSNNE 95
SK IGEKMK KEP GD S L N + V NE
Sbjct: 61 SKEIGEKMKKKEPQGDESEPLPQSVQDQLREMQLTSLKELTVNQIKKVRTLIDAAVVENE 120
Query: 96 DENGIVRTKGDTEVRKKYSH-------------------------------VDLITMIDG 124
+ V K + +R+ +H VDLI MIDG
Sbjct: 121 QQMKEVEAKRNAALREVGNHLHESVPVSNDEDENRVERTFGNCETRLKYSHVDLIVMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
++ + GA+V+GGRGYFL GPAV L+ L+Q+AL K YTPLYTPFFMRKEVMQEVAQ
Sbjct: 181 MNGDKGAVVSGGRGYFLTGPAVFLEQALIQHALHSLYAKDYTPLYTPFFMRKEVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKV+GKG + A + D+KYLIATSEQPI A HRD W+PEASLPI+Y
Sbjct: 241 LSQFDEELYKVVGKG---SERAEDGTATDEKYLIATSEQPIAAYHRDEWIPEASLPIKYA 297
Query: 245 GVSTCFRQE-----------------------DLTK------------------------ 257
G+STCFRQE LT
Sbjct: 298 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEAFCQSL 357
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YRVVNIVSGALNHAA+KKLDLEAWF GSGAFRELVSCSNCLDYQ+RRLLVRYGQTKK
Sbjct: 358 GIPYRVVNIVSGALNHAASKKLDLEAWFAGSGAFRELVSCSNCLDYQARRLLVRYGQTKK 417
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN +++VHMLNAT CATTRVICAILETHQTETGV++P+ L+K++P Y EIPFVK
Sbjct: 418 MNAAVDYVHMLNATMCATTRVICAILETHQTETGVKVPEVLQKYMPEKYRE---EIPFVK 474
Query: 378 TAPIDEEE 385
APID E+
Sbjct: 475 PAPIDVEQ 482
>gi|194855292|ref|XP_001968514.1| GG24463 [Drosophila erecta]
gi|190660381|gb|EDV57573.1| GG24463 [Drosophila erecta]
Length = 501
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/487 (52%), Positives = 305/487 (62%), Gaps = 110/487 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR++KGG+P+ VR+NQK RFK+V LV+ VI D +WRQ RH+ADN NK KN+C
Sbjct: 1 MVLDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP------------GNHLHPSV-------------PVSNNE 95
SKVIGEKMK KEPVG S P L P ++ N+
Sbjct: 61 SKVIGEKMKKKEPVGAMSEDPPAEVTKDLTEIVAETLQPLTVNQIKQLRVLIDDAMTENQ 120
Query: 96 DENGIVRTKGDTEVRKKYSHV-------------------------------DLITMIDG 124
+ +T +R+ +H+ DLI MIDG
Sbjct: 121 KSLELAEQTRNTSLREVGNHLHESVPVSNDEDENRVERTFGDCEKRGKYSHVDLIVMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+++E GA+V+GGRGYFL G AV L+ L+Q+AL + Y PLYTPFFMRKEVMQEVAQ
Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHALHLLYARDYVPLYTPFFMRKEVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKV+GKG + E+ +D+KYLIATSEQPI A HRD WLPEASLPI+Y
Sbjct: 241 LSQFDEELYKVVGKGSE----KAEEVGIDEKYLIATSEQPIAAYHRDEWLPEASLPIKYA 296
Query: 245 GVSTCFRQE-----------------------DLTK------------------------ 257
G+STCFRQE LT
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSL 356
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YRVVNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQTKK
Sbjct: 357 GIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN +++VHMLNAT CA TRVICAILETHQTETG+++P+ L+K++PA + + EIPFVK
Sbjct: 417 MNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKKYLPAKFQD---EIPFVK 473
Query: 378 TAPIDEE 384
APID E
Sbjct: 474 PAPIDLE 480
>gi|195470961|ref|XP_002087775.1| GE14950 [Drosophila yakuba]
gi|194173876|gb|EDW87487.1| GE14950 [Drosophila yakuba]
Length = 501
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 255/487 (52%), Positives = 307/487 (63%), Gaps = 110/487 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR++KGG+P+ VR+NQK RFK+V LV+ VI D +WRQ RH+ADN NK KN+C
Sbjct: 1 MVLDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVC 60
Query: 61 SKVIGEKMKAKEPVGD-SSTLPGN-----------HLHPSV-------------PVSNNE 95
SKVIGEKMK KEPVG S LP + L P ++ N+
Sbjct: 61 SKVIGEKMKKKEPVGAMSEDLPADVTKDLTEIVAETLQPLTVNQIKQLRVLIDDAMTENQ 120
Query: 96 DENGIVRTKGDTEVRKKYSH-------------------------------VDLITMIDG 124
+ +T +R+ +H VDLI MIDG
Sbjct: 121 KSLELAEQTRNTSLREVGNHLHESVPVSNDEDENRVERTFGDCEKRGKYSHVDLIVMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+++E GA+V+GGRGYFL G AV L+ L+Q+AL + Y PLYTPFFMRKEVMQEVAQ
Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHALHLLYARDYVPLYTPFFMRKEVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKV+GKG + E+ +D+KYLIATSEQPI A HRD WLPEASLPI+Y
Sbjct: 241 LSQFDEELYKVVGKGSE----KAEEVGIDEKYLIATSEQPIAAYHRDEWLPEASLPIKYA 296
Query: 245 GVSTCFRQE-----------------------DLTK------------------------ 257
G+STCFRQE LT
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSL 356
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YRVVNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVR+GQTKK
Sbjct: 357 GIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN +++VHMLNAT CA TRVICAILETHQTETG+++P+ L+K++PA + + EIPFVK
Sbjct: 417 MNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKFQD---EIPFVK 473
Query: 378 TAPIDEE 384
APID E
Sbjct: 474 PAPIDLE 480
>gi|148670021|gb|EDL01968.1| seryl-aminoacyl-tRNA synthetase, isoform CRA_a [Mus musculus]
Length = 515
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/501 (50%), Positives = 311/501 (62%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK----- 55
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK
Sbjct: 4 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 63
Query: 56 --------------------------FKNLCSKVI-----------------------GE 66
F +L + + GE
Sbjct: 64 SKTIGEKMKKKEAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKCDGE 123
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 124 RVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 183
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKGP V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 184 EGEKGAVVAGSRGYFLKGPLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 243
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 244 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 299
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 300 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLG 359
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 360 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 419
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +Q E G+ +P+ LR+F+P + E IPFVK
Sbjct: 420 MDKVEFVHMLNATMCATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKP 476
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 477 APIDQEPSKKQKKQHEGSKKK 497
>gi|195342173|ref|XP_002037676.1| GM18172 [Drosophila sechellia]
gi|194132526|gb|EDW54094.1| GM18172 [Drosophila sechellia]
Length = 501
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 255/487 (52%), Positives = 307/487 (63%), Gaps = 110/487 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR++KGG+P+ VR+NQK RFK+V LV+ VI D +WRQ RH+ADN NK KN+C
Sbjct: 1 MVLDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVC 60
Query: 61 SKVIGEKMKAKEPVGD-SSTLPGN-----------HLHPSV-------------PVSNNE 95
SKVIGEKMK KEPVG S LP + L P ++ N+
Sbjct: 61 SKVIGEKMKKKEPVGAMSEDLPADVTKDLTEIVAETLQPLTVNQIKQLRVLIDDAMTENQ 120
Query: 96 DENGIVRTKGDTEVRKKYSH-------------------------------VDLITMIDG 124
+ +T +R+ +H VDLI MIDG
Sbjct: 121 KSLELAEQTRNTSLREVGNHLHESVPVSNDEDENRVERNFGDCEKRGKYSHVDLIMMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+++E GA+V+GGRGYFL G AV L+ L+Q+AL + Y PLYTPFFMRKEVMQEVAQ
Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHALHLLYARDYVPLYTPFFMRKEVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKV+GKG + E+ +D+KYLIATSEQPI A HRD WLPEASLPI+Y
Sbjct: 241 LSQFDEELYKVVGKGSE----KAEEVGIDEKYLIATSEQPIAAYHRDEWLPEASLPIKYA 296
Query: 245 GVSTCFRQE-----------------------DLTK------------------------ 257
G+STCFRQE LT
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSL 356
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YRVVNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVR+GQTKK
Sbjct: 357 GIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN +++VHMLNAT CA TRVICAILETHQTETG+++P+ L+K++PA + + EIPFVK
Sbjct: 417 MNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKFQD---EIPFVK 473
Query: 378 TAPIDEE 384
APID E
Sbjct: 474 PAPIDLE 480
>gi|326381098|ref|NP_001191908.1| serine--tRNA ligase, cytoplasmic isoform 2 [Mus musculus]
gi|18266844|sp|P26638.3|SYSC_MOUSE RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|14250361|gb|AAH08612.1| Sars protein [Mus musculus]
gi|26344682|dbj|BAC35990.1| unnamed protein product [Mus musculus]
Length = 512
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/501 (50%), Positives = 311/501 (62%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK----- 55
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 56 --------------------------FKNLCSKVI-----------------------GE 66
F +L + + GE
Sbjct: 61 SKTIGEKMKKKEAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKCDGE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKGP V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGPLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +Q E G+ +P+ LR+F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 474 APIDQEPSKKQKKQHEGSKKK 494
>gi|74139849|dbj|BAE31768.1| unnamed protein product [Mus musculus]
Length = 512
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/501 (50%), Positives = 311/501 (62%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK----- 55
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 56 --------------------------FKNLCSKVI-----------------------GE 66
F +L + + GE
Sbjct: 61 SKAIGEKMKKKEAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKCDGE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKGP V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGPLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +Q E G+ +P+ LR+F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 474 APIDQEPSKKQKKQHEGSKKK 494
>gi|24581334|ref|NP_608743.2| CG17259, isoform A [Drosophila melanogaster]
gi|442625652|ref|NP_001259982.1| CG17259, isoform B [Drosophila melanogaster]
gi|7295855|gb|AAF51155.1| CG17259, isoform A [Drosophila melanogaster]
gi|54650696|gb|AAV36927.1| LP20978p [Drosophila melanogaster]
gi|220952100|gb|ACL88593.1| CG17259-PA [synthetic construct]
gi|440213251|gb|AGB92519.1| CG17259, isoform B [Drosophila melanogaster]
Length = 501
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/487 (52%), Positives = 307/487 (63%), Gaps = 110/487 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR++KGG+P+ VR+NQK RFK+V LV+ VI D +WRQ RH+ADN NK KN+C
Sbjct: 1 MVLDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVC 60
Query: 61 SKVIGEKMKAKEPVGD-SSTLPGN-----------HLHPSV-------------PVSNNE 95
SKVIGEKMK KEPVG S LP + L P ++ N+
Sbjct: 61 SKVIGEKMKKKEPVGAMSEDLPADVTKDLTEIVAETLQPLTVNQIKQLRVLIDDAMTENQ 120
Query: 96 DENGIVRTKGDTEVRKKYSH-------------------------------VDLITMIDG 124
+ +T +R+ +H VDLI MIDG
Sbjct: 121 KSLELAEQTRNTSLREVGNHLHESVPVSNDEDENRVERTFGDCEKRGKYSHVDLIVMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+++E GA+V+GGRGYFL G AV L+ L+Q+AL + Y PLYTPFFMRKEVMQEVAQ
Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHALHLLYARDYVPLYTPFFMRKEVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKV+GKG + E+ +D+KYLIATSEQPI A HRD WLPE+SLPI+Y
Sbjct: 241 LSQFDEELYKVVGKGSE----KAEEVGIDEKYLIATSEQPIAAYHRDEWLPESSLPIKYA 296
Query: 245 GVSTCFRQE-----------------------DLTK------------------------ 257
G+STCFRQE LT
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSL 356
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YRVVNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVR+GQTKK
Sbjct: 357 GIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN +++VHMLNAT CA TRVICAILETHQTETG+++P+ L+K++PA + + EIPFVK
Sbjct: 417 MNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKFQD---EIPFVK 473
Query: 378 TAPIDEE 384
APID E
Sbjct: 474 PAPIDLE 480
>gi|196006439|ref|XP_002113086.1| hypothetical protein TRIADDRAFT_25588 [Trichoplax adhaerens]
gi|190585127|gb|EDV25196.1| hypothetical protein TRIADDRAFT_25588 [Trichoplax adhaerens]
Length = 491
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/496 (50%), Positives = 304/496 (61%), Gaps = 112/496 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGG+PE +R+ Q+ RFK+V LVD+V++ D +WR+ R ADN+NK KN C
Sbjct: 1 MVLDLDLFREDKGGNPESIRQCQRKRFKDVSLVDQVVQLDSEWRKLRFAADNWNKLKNQC 60
Query: 61 SKVIGEKMKAKE-------------------PVGDSSTLP-------------------- 81
SKV GEKMK KE + D TL
Sbjct: 61 SKVYGEKMKKKEETGTDDSLEGDVVAKLANLTIDDLRTLTPVRVKKIRSLIDDRIAACNA 120
Query: 82 ----------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
GN LH SVP+SN+ED N +V T GD EV+K+YSH+DL M+DGV
Sbjct: 121 EVIKVEERRSEKLRAIGNLLHESVPISNDEDNNAVVATHGDCEVKKRYSHIDLAYMVDGV 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D+ G + AGGRGY+LKG V L+ L+Q+AL +KGY PLYTPF MRKEVM EVAQL
Sbjct: 181 DTNRGTVTAGGRGYYLKGKLVFLEFALIQHALRILAKKGYVPLYTPFLMRKEVMTEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFDEELYKVIGKG E V DS+ +D+KYLIATSEQPI A HR W+ + LP +Y
Sbjct: 241 SQFDEELYKVIGKGSENVDDSS-----IDEKYLIATSEQPIAAYHRAEWINPSELPKKYA 295
Query: 245 GVSTCFRQE---------------------------------------------DLTKS- 258
GVSTCFRQE D +S
Sbjct: 296 GVSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWKLMEEMIENASDYYQSL 355
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I+YR+VNIVSGALN+AA+KKLDLEAWFPGSGAFRELVSCSNC DYQSRRL +R+GQTKK
Sbjct: 356 GISYRIVNIVSGALNNAASKKLDLEAWFPGSGAFRELVSCSNCTDYQSRRLQIRFGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN + E+VHMLN+T CATTR ICAILET QTETG+ +P+ L +++P + I F K
Sbjct: 416 MNAQAEYVHMLNSTMCATTRAICAILETFQTETGIAVPEVLHQYLPP----DCAFIEFTK 471
Query: 378 TAPIDEEETKKQKKQK 393
P D+ TK+ KK K
Sbjct: 472 PVPTDKLTTKELKKTK 487
>gi|71897227|ref|NP_001026563.1| seryl-tRNA synthetase, cytoplasmic [Gallus gallus]
gi|53127678|emb|CAG31168.1| hypothetical protein RCJMB04_2o24 [Gallus gallus]
Length = 514
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 257/502 (51%), Positives = 310/502 (61%), Gaps = 111/502 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKN-- 58
MVLDLDLFR +KGGDP VR+ Q+ RFK+ LVD ++ D WR+ R +ADN NK KN
Sbjct: 1 MVLDLDLFRADKGGDPAAVREMQRKRFKDPALVDALVRADGAWRRCRFRADNLNKLKNLC 60
Query: 59 -----------------------------LCSKVIG-----------------------E 66
L + V+G E
Sbjct: 61 SKTIGDKMKKKEPVGSDESVPESAQNLDELTADVLGGLQVSQIKKVRLLIDEAILECDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
+++ + +S GN LHPSVP+SN+ED +N + R GD RKKYSHVDL+ M+DG
Sbjct: 121 RVRLEAERFESLREIGNLLHPSVPISNDEDADNKVERIWGDCSCRKKYSHVDLVVMVDGY 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKGP V L+ L+QYAL KGYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGPLVFLEQALIQYALQSLRAKGYTPVYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFDEELYKVIGKG EK DS+ +D+KYLIATSEQPI A+HRD WL LPI+Y
Sbjct: 241 SQFDEELYKVIGKGSEKAEDSS-----VDEKYLIATSEQPIAALHRDEWLKPEDLPIKYA 295
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+STCFRQ E+ +S
Sbjct: 296 GLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMIATAEEFYQSL 355
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y +VNIVSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +R+GQTKK
Sbjct: 356 GIPYHIVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRFGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
M +K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR F+P + I FVK
Sbjct: 416 MMDKVEFVHMLNATMCATTRTICAILENYQTEEGIVVPERLRDFMPP---DLRQIIRFVK 472
Query: 378 TAPIDEEETKKQKKQKEGMKKK 399
API++E +KKQKKQ+EG +KK
Sbjct: 473 PAPIEQELSKKQKKQQEGGRKK 494
>gi|354506522|ref|XP_003515309.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic isoform 1 [Cricetulus
griseus]
gi|344259031|gb|EGW15135.1| Seryl-tRNA synthetase, cytoplasmic [Cricetulus griseus]
Length = 512
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 257/502 (51%), Positives = 313/502 (62%), Gaps = 111/502 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK----- 55
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 56 --------------------------FKNLCSKVI-----------------------GE 66
F +L + + GE
Sbjct: 61 SKTIGEKMKKKEPVGDDEFIPEDVLNFDDLTADTLSALKVSQIKKVRLLIDEAIQKCDGE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RLKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFDEELYKVIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LPI+Y
Sbjct: 241 SQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYA 295
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+STCFRQ E+ +S
Sbjct: 296 GLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIGTAEEFYQSL 355
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKK
Sbjct: 356 GIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
M +K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK
Sbjct: 416 MMDKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLREFMPP-GLQEL--IPFVK 472
Query: 378 TAPIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 473 PAPIDQEPSKKQKKQHEGSKKK 494
>gi|410898890|ref|XP_003962930.1| PREDICTED: serine--tRNA ligase, cytoplasmic-like [Takifugu
rubripes]
Length = 515
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 263/491 (53%), Positives = 301/491 (61%), Gaps = 111/491 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDPE VR+ Q+ RFK+V LVDK++ D +WR+ R ADN NK KNLC
Sbjct: 1 MVLDLDLFRTDKGGDPEIVRECQRKRFKDVTLVDKLVAADTEWRKCRFTADNLNKVKNLC 60
Query: 61 SKV----------IGE------------------------------KMKAKEPVG--DSS 78
SK +GE ++ E +G DS
Sbjct: 61 SKSIGEKMKKKEPVGEDETLPEEAQDLESVTAETLATLTVAQIKKVRLLVDEAIGKTDSE 120
Query: 79 TLP------------GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
+ GN LHPSVP+SN+ED +N + RT GD RKKYSHVDL+ MIDG
Sbjct: 121 RVTLEEERFEHLREIGNLLHPSVPISNDEDADNKVERTWGDCAARKKYSHVDLVVMIDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E GAIVAG RGYFLKGP V L+ L+ YAL K Y+ LYTPFFMRKEVMQEVAQL
Sbjct: 181 DGEKGAIVAGSRGYFLKGPLVFLEQALINYALRILHSKSYSMLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFDEELYKVIGKG EK DS+ +D+KYLIATSEQPI A RD WL LPIRY
Sbjct: 241 SQFDEELYKVIGKGSEKSDDSS-----IDEKYLIATSEQPIAAFLRDEWLKPEDLPIRYA 295
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G STCFRQ E+ +S
Sbjct: 296 GFSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWQMFDEMIGTAEEFYQSL 355
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YR+VNIVSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKK
Sbjct: 356 GIPYRIVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
M +K EFVHMLNAT CATTRV+CAILE +QTE G+ IP+ LR F+P I FVK
Sbjct: 416 MMDKAEFVHMLNATMCATTRVMCAILENYQTEEGIVIPEKLRDFMPPGMTE---IIKFVK 472
Query: 378 TAPIDEEETKK 388
APID+E KK
Sbjct: 473 PAPIDQETAKK 483
>gi|47205013|emb|CAF89013.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 258/490 (52%), Positives = 300/490 (61%), Gaps = 111/490 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDPE VR++Q+ RFK+V LVDK++ D +WR+ R ADN NK KNLC
Sbjct: 1 MVLDLDLFRTDKGGDPEIVRESQRKRFKDVTLVDKLVAADTEWRKCRFTADNLNKAKNLC 60
Query: 61 SKVI----------GEKMKAKEPVGDSSTLP----------------------------- 81
S+ I GE E D L
Sbjct: 61 SRSIGEKMKRKEAVGEDQSVPEAAQDLEALTAETLSSLSVSQIKQVRLLVDEAIGRTDGE 120
Query: 82 ---------------GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
GN LHPSVP+SN+ED +N + RT GD V+KKYSHVDL+ MIDG
Sbjct: 121 RLRLEAERFEHLREIGNLLHPSVPISNDEDADNKVERTWGDCCVQKKYSHVDLVVMIDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E GA+VAG RGYFLKGP V L+ L+ YAL K Y+ LYTPFFMRKEVMQEVAQL
Sbjct: 181 DGEKGAVVAGSRGYFLKGPLVFLEQALINYALRMLHAKSYSMLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFDEELYKVIGKG EK DS+ +D+KYLIATSEQPI A RD WL LPIRY
Sbjct: 241 SQFDEELYKVIGKGSEKSEDSS-----IDEKYLIATSEQPIAAFLRDEWLKPEDLPIRYA 295
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G STCFRQ E+ +S
Sbjct: 296 GFSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWQMFEEMIGTAEEFYQSL 355
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YR+VNIVSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKK
Sbjct: 356 GIPYRIVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLHIRYGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
M +K EFVHMLNAT CATTRV+CAILE +QTE G+ +P+ LR+F+P + I FVK
Sbjct: 416 MMDKAEFVHMLNATMCATTRVMCAILENYQTEEGIVVPETLREFMPPGMTD---MIRFVK 472
Query: 378 TAPIDEEETK 387
API++E T+
Sbjct: 473 PAPIEQEATR 482
>gi|56090265|ref|NP_001007607.1| serine--tRNA ligase, cytoplasmic [Rattus norvegicus]
gi|81885333|sp|Q6P799.3|SYSC_RAT RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|38197710|gb|AAH61765.1| Seryl-tRNA synthetase [Rattus norvegicus]
gi|149025696|gb|EDL81939.1| seryl-aminoacyl-tRNA synthetase 1, isoform CRA_b [Rattus
norvegicus]
Length = 512
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 257/502 (51%), Positives = 312/502 (62%), Gaps = 111/502 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK----- 55
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 56 --------------------------FKNLCSKVI-----------------------GE 66
F +L + + GE
Sbjct: 61 SKTIGEKMKKKEPVGEDESIPEDVLNFDDLTADTLAALKVSQIKKVRLLVDEAIQKCDGE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFDEELYKVIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LPI+Y
Sbjct: 241 SQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYA 295
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G STCFRQ E+ +S
Sbjct: 296 GFSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSL 355
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKK
Sbjct: 356 GIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
M +K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK
Sbjct: 416 MMDKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLREFMPP-GLQEL--IPFVK 472
Query: 378 TAPIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 473 PAPIDQEPSKKQKKQHEGSKKK 494
>gi|72135958|ref|XP_793542.1| PREDICTED: serine--tRNA ligase, cytoplasmic-like
[Strongylocentrotus purpuratus]
Length = 526
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/487 (51%), Positives = 302/487 (62%), Gaps = 112/487 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDL+LFR +KGG+PEK++++Q RFK+ LVDKV+E D +WR+ R++ADN NK KNLC
Sbjct: 1 MVLDLELFRADKGGNPEKIKESQAKRFKDATLVDKVVEADTEWRKLRYQADNLNKLKNLC 60
Query: 61 SKVIGEKMKAK-------EPVG---------------DSSTLP----------------- 81
SK+IGEKMK K EPV DS +L
Sbjct: 61 SKMIGEKMKKKEPVGDESEPVPEAVTAQLGDLTREILDSHSLSVAQLKKVRQLVEDGIIE 120
Query: 82 -------------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMI 122
GN LH SV VSN+EDEN I R GD VRKKYSHVDLI MI
Sbjct: 121 CDNKRKECGDKRKASLWEIGNLLHDSVRVSNDEDENVIERMHGDCTVRKKYSHVDLIHMI 180
Query: 123 DGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEV 182
DG+++E G +VAG RGYFLKG AV L + + Q+AL +GYTPLYTPFFMRKE+MQEV
Sbjct: 181 DGMEAERGTVVAGNRGYFLKGAAVFLSLAVQQHALRILTSRGYTPLYTPFFMRKEIMQEV 240
Query: 183 AQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIR 242
AQL+QFD+ELYKV+GKG + E++ +++KYLIATSEQPI A HR+ W+ + LP +
Sbjct: 241 AQLSQFDDELYKVVGKGSE----KSEENTIEEKYLIATSEQPIAAFHRNEWMSPSELPKK 296
Query: 243 YLGVSTCFRQEDLTK--------------------------------------------- 257
Y G STCFRQE +
Sbjct: 297 YAGFSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFCFASPKDNMSWLLFDEMMDNAEKFCQ 356
Query: 258 --SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT 315
I YR+V IVSGALN+AAAKKLDLEAWF GSGAFRELVSCSNC DYQ+RRLLVRYGQT
Sbjct: 357 SLGIPYRIVGIVSGALNNAAAKKLDLEAWFAGSGAFRELVSCSNCTDYQARRLLVRYGQT 416
Query: 316 KKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 375
KKMN E+VHMLN+T CA+TRV+CAILE +QTETG+ IP+ +R+F+P Y I F
Sbjct: 417 KKMNASAEYVHMLNSTMCASTRVVCAILENNQTETGIVIPEAIREFMPPEYKE---FIKF 473
Query: 376 VKTAPID 382
K +PID
Sbjct: 474 TKPSPID 480
>gi|225709734|gb|ACO10713.1| Seryl-tRNA synthetase, cytoplasmic [Caligus rogercresseyi]
Length = 503
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 258/503 (51%), Positives = 310/503 (61%), Gaps = 112/503 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+D FRTEKGGDPEK+RKNQK RF + VDKV+E D WR+ RH+ADN+NK KN+
Sbjct: 1 MVLDIDAFRTEKGGDPEKIRKNQKLRFSDESSVDKVLELDEGWRKVRHEADNWNKLKNMA 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPG-------------------------NHLHPSVPVSNNE 95
SKVIGEKMK KEPVGD +LP L V NNE
Sbjct: 61 SKVIGEKMKKKEPVGDDDSLPSEVTSGLLDLNKEKLDALTVTQIKKIRLLIDEAIVKNNE 120
Query: 96 D-------------------------------ENGIVRTKGDTEVRKKYSHVDLITMIDG 124
+N + +T GD RKKYSHVDLI MI G
Sbjct: 121 SLLSLAKKRDDTLKELSNWLHPSVPVSNDEDKDNRVEKTFGDVSSRKKYSHVDLIHMIGG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+D+E G + +GGRGY+L GPAV LQ L+Q AL +KG++PLYTPFFMRKEVM EVAQ
Sbjct: 181 MDAERGTVTSGGRGYYLIGPAVFLQQALIQLALQTLSKKGFSPLYTPFFMRKEVMMEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDE-LDDKYLIATSEQPICAVHRDSWLPEASLPIRY 243
L+QFDEELYKV GKG S E+D+ +++KYLIATSEQPI A HR+ W+ E SLP++Y
Sbjct: 241 LSQFDEELYKVTGKG-----SENEEDKSIEEKYLIATSEQPIAAFHREEWMNEKSLPVKY 295
Query: 244 LGVSTCFRQEDLTK---------------------------------------------- 257
G+STCFRQE +
Sbjct: 296 AGISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVITSPHDNKSWEAFDEMIGNAEKFYQV 355
Query: 258 -SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK 316
I YR+V IVSGALN+AAAKK+DLEAWF G GAFRELVSCSNCLDYQ+RRL VRYGQTK
Sbjct: 356 LGIPYRLVCIVSGALNNAAAKKIDLEAWFAGGGAFRELVSCSNCLDYQARRLRVRYGQTK 415
Query: 317 KMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 376
KMN+ E+ HMLN T CA TRVICA++ETHQTET +++P+ ++ ++P Y + EIPF+
Sbjct: 416 KMNQATEYCHMLNGTMCAVTRVICALMETHQTETSIKVPEAIKAWMPEQYRD---EIPFI 472
Query: 377 KTAPIDEEETKKQKKQKEGMKKK 399
APIDE E+KK KKQKEGM KK
Sbjct: 473 HPAPIDEAESKKSKKQKEGMNKK 495
>gi|74212487|dbj|BAE30986.1| unnamed protein product [Mus musculus]
Length = 511
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 251/500 (50%), Positives = 311/500 (62%), Gaps = 108/500 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK----- 55
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 56 --------------------------FKNLCSKVI-----------------------GE 66
F +L + + GE
Sbjct: 61 SKTIGEKMKKKEAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKCDGE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHV+L+ M+DG
Sbjct: 121 RVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVNLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKGP V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGPLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ--------------------------------------------EDLTKS--I 259
+STCF++ E+ +S I
Sbjct: 297 LSTCFQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGI 356
Query: 260 AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMN 319
Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 PYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMM 416
Query: 320 EKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTA 379
+K+EFVHMLNAT CATTR ICAILE +Q E G+ +P+ LR+F+P + E IPFVK A
Sbjct: 417 DKVEFVHMLNATMCATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKPA 473
Query: 380 PIDEEETKKQKKQKEGMKKK 399
PID+E +KKQKKQ EG KKK
Sbjct: 474 PIDQEPSKKQKKQHEGSKKK 493
>gi|268537226|ref|XP_002633749.1| C. briggsae CBR-SRS-2 protein [Caenorhabditis briggsae]
Length = 487
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/494 (51%), Positives = 299/494 (60%), Gaps = 111/494 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+DLFR E+GG+P+ +RK+Q+DR+K+V LVD+VIE D KWR+ + AD N+ KN
Sbjct: 1 MVLDIDLFRVERGGNPDVIRKSQRDRYKDVTLVDQVIEWDEKWRKEKFLADRLNRQKNAI 60
Query: 61 SKVIGEKMKAKEPVGDS-------------------STLP-------------------- 81
SK IGEKMK KEP G+ STL
Sbjct: 61 SKAIGEKMKKKEPQGNDDSVAEDIVARLAELKLDELSTLTVVQLKKLRLLVDEKSVETAA 120
Query: 82 ----------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
GN LH SV VS+ ED N + RT GD RKKYSHVDL+ M+DG
Sbjct: 121 AAVAHETARHEKLIQIGNLLHDSVVVSDKEDNNKVERTFGDLTTRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G +VAGGRGYFLKGP V L+ ++Q AL + KGYTPLYTPFFMRKEVMQEVAQL
Sbjct: 181 DGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQRLNLKGYTPLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFD+ELYKV KG +V GD+ +D+KYLIATSEQPI A HR+ W+ E LPI+Y
Sbjct: 241 SQFDDELYKVSSKGSEVAGDTT-----VDEKYLIATSEQPIAAYHRNEWIKETELPIKYA 295
Query: 245 GVSTCFRQEDLTK----------------------------------------------- 257
GVSTCFRQE +
Sbjct: 296 GVSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQEL 355
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y VVNIVSG LN+AAAKK DLEAWFPGSGA RELVSCSNCLDYQSRRL VRYGQTKK
Sbjct: 356 QIPYHVVNIVSGELNNAAAKKFDLEAWFPGSGAMRELVSCSNCLDYQSRRLKVRYGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
+N ++ FVHMLNAT CATTRVICAILE +QTE G+ +P +++++P Y IPFVK
Sbjct: 416 LNGEVPFVHMLNATMCATTRVICAILENNQTEEGINVPTAIQQWMPEQY---RTFIPFVK 472
Query: 378 TAPIDEEETKKQKK 391
APID + K K
Sbjct: 473 PAPIDVDAKKAAAK 486
>gi|426330695|ref|XP_004026342.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Gorilla gorilla
gorilla]
Length = 508
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/495 (51%), Positives = 306/495 (61%), Gaps = 103/495 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKE--------PVGDSSTLPGNHLHP---------SVPVS---NNED---- 96
SK IGEKMK +E G L H P SVP ED
Sbjct: 61 SKTIGEKMKVRELNNKHHSHTRGPIIMLIPMHTPPWVFFGTYVQSVPAGYFLKQEDGIDV 120
Query: 97 ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYA 156
+N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYFLKG V L+ L+QYA
Sbjct: 121 DNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYA 180
Query: 157 LSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKY 216
L +GY P+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG + D + D+KY
Sbjct: 181 LRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDD----NSYDEKY 236
Query: 217 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------------------ 252
LIATSEQPI A+HRD WL LPI+Y G+STCFRQ
Sbjct: 237 LIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQF 296
Query: 253 ---------------------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
E+ +S I Y +VNIVSG+LNHAA+KKLDLEAWFPGSG
Sbjct: 297 VYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSG 356
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEK-------------------------IEF 324
AFRELVSCSNC DYQ+RRL +RYGQTKKM +K +EF
Sbjct: 357 AFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLHLSTQNKLEASLFSPKKVWVVEF 416
Query: 325 VHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 384
VHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E
Sbjct: 417 VHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPG-LQEL--IPFVKPAPIEQE 473
Query: 385 ETKKQKKQKEGMKKK 399
+KKQKKQ EG KKK
Sbjct: 474 PSKKQKKQHEGSKKK 488
>gi|126310917|ref|XP_001372417.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Monodelphis
domestica]
Length = 513
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/502 (50%), Positives = 307/502 (61%), Gaps = 111/502 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFN------ 54
MVLDLDLFR +KGGDP VR+ Q+ RFK+ LVD+++ D +WR+ R +ADN N
Sbjct: 1 MVLDLDLFRVDKGGDPALVRETQEKRFKDPGLVDQLVRADSEWRRCRFRADNLNKLKNLC 60
Query: 55 -------------------------KFKNLCSKVIG-----------------------E 66
K +L ++ + E
Sbjct: 61 SKTIGEKMKKKEPVGDNESLPESVLKLDDLTAETLAGLKVTQIKKVRLLIDEAIIKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
+M+ + +S GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RMQLEAERFESLREIGNLLHPSVPISNDEDTDNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+Q AL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQLALRTLSSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFDEELYKVIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LPI+Y
Sbjct: 241 SQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYA 295
Query: 245 GVSTCFRQEDLTK----------------------------------------------- 257
G STCFRQE +
Sbjct: 296 GFSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFEEMISTAEEFYQAL 355
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKK
Sbjct: 356 GIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
M +K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 416 MMDKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQEL--IPFVK 472
Query: 378 TAPIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 473 PAPIDQEPSKKQKKQHEGGKKK 494
>gi|403284158|ref|XP_003933447.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Saimiri boliviensis
boliviensis]
Length = 512
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/501 (49%), Positives = 308/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDDSIPENVLNFDDLTADTLANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCSVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKADD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 474 APIDQEPSKKQKKQHEGSKKK 494
>gi|291398355|ref|XP_002715855.1| PREDICTED: seryl-tRNA synthetase isoform 2 [Oryctolagus cuniculus]
Length = 514
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/501 (50%), Positives = 310/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 52 -------------------------NFN----------------KFKNLCSKVI----GE 66
NF+ K + L + I E
Sbjct: 61 SKTIGEKMKKKEPVGDDESIPENVLNFDDVTADTLTNLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + +S GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFESLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLRNRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 474 APIDQEPSKKQKKQHEGSKKK 494
>gi|75075821|sp|Q4R4U9.3|SYSC_MACFA RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|67971068|dbj|BAE01876.1| unnamed protein product [Macaca fascicularis]
Length = 514
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/501 (49%), Positives = 308/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVEDDESVPENVLNFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 474 APIDQEPSKKQKKQHEGSKKK 494
>gi|289743367|gb|ADD20431.1| seryl-tRNA synthetase [Glossina morsitans morsitans]
Length = 495
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/487 (52%), Positives = 298/487 (61%), Gaps = 114/487 (23%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKN--------------------------QKDRFKNVE-LV 33
MVLDLDLFR++KGGDP+ VRKN Q D V+ L
Sbjct: 1 MVLDLDLFRSDKGGDPDAVRKNQEKRFKDVGLVETVISEDMEWRQRRHQADNLNKVKNLC 60
Query: 34 DKVIENDLKWRQ-FRHKAD-------------NFNKFKNLCSK-------VIGEKMKAKE 72
KVI +K R+ ++D N K L +I + M E
Sbjct: 61 SKVIGEKMKKREPLGDESDEVPAELQSPLTELNVEKLSELSVNQIKKVRLLIDQAMSENE 120
Query: 73 PVGDSSTLP--------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
+ ++ GNHLH SVPVSN+EDEN + R GD E + KYSHVDLI MIDG
Sbjct: 121 SLLQANEQKRNLALREVGNHLHESVPVSNDEDENKVERMYGDCEKQAKYSHVDLIVMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
++ + GA+V+GGRGYFL GPAV L+ L+Q+AL K YTPLYTPFFMRKEVMQEVAQ
Sbjct: 181 MNGDKGAVVSGGRGYFLTGPAVFLEQALIQHALHMLYAKNYTPLYTPFFMRKEVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKVIGKG + GD D+KYLIATSEQPI A HRD WL E++LPI+Y
Sbjct: 241 LSQFDEELYKVIGKGIEKGD--------DEKYLIATSEQPIAAYHRDEWLSESALPIKYA 292
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+STCFRQ ED KS
Sbjct: 293 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMEEMIGNAEDFCKSL 352
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YR+VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTKK
Sbjct: 353 GIPYRIVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKK 412
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN +++VHMLNAT CATTRVICAILETHQTETGV +P+ LRK++P +Y EIPFVK
Sbjct: 413 MNASVDYVHMLNATMCATTRVICAILETHQTETGVTVPEPLRKYMPEIYRE---EIPFVK 469
Query: 378 TAPIDEE 384
API+ E
Sbjct: 470 PAPIELE 476
>gi|380815438|gb|AFE79593.1| seryl-tRNA synthetase, cytoplasmic [Macaca mulatta]
gi|383420617|gb|AFH33522.1| seryl-tRNA synthetase, cytoplasmic [Macaca mulatta]
Length = 514
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/501 (49%), Positives = 308/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKA---------- 50
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +A
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 51 ---------------------DNFNKFKNLCSKVIG-----------------------E 66
+N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVEDDESVPENVLNFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 474 APIDQEPSKKQKKQHEGSKKK 494
>gi|431896447|gb|ELK05859.1| Seryl-tRNA synthetase, cytoplasmic [Pteropus alecto]
Length = 514
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/501 (49%), Positives = 306/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKA---------- 50
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +A
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPRLVDQLVKADGEWRRCRFQADNLNKLKNLC 60
Query: 51 ---------------------DNFNKFKNLCSKVIG-----------------------E 66
DN NL + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDESIPDNVLSLDNLTADTLANLKVSQIKKLRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RLKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E G +VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGVVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICA+LE +QTE G+ +P+ LR+F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICALLENYQTEEGIVVPEKLREFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 474 APIDQEPSKKQKKQHEGSKKK 494
>gi|395821597|ref|XP_003784124.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Otolemur garnettii]
Length = 514
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/501 (49%), Positives = 308/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGG+P +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGNPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFQADNLNKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDESIPDNVLNFDDLTADTLAKLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 474 APIDQEPSKKQKKQHEGSKKK 494
>gi|354506524|ref|XP_003515310.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic isoform 2 [Cricetulus
griseus]
Length = 536
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/526 (48%), Positives = 313/526 (59%), Gaps = 135/526 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK----- 55
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 56 --------------------------FKNLCSKVI-----------------------GE 66
F +L + + GE
Sbjct: 61 SKTIGEKMKKKEPVGDDEFIPEDVLNFDDLTADTLSALKVSQIKKVRLLIDEAIQKCDGE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RLKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFDEELYKVIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LPI+Y
Sbjct: 241 SQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYA 295
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+STCFRQ E+ +S
Sbjct: 296 GLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIGTAEEFYQSL 355
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKK
Sbjct: 356 GIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 415
Query: 318 MNE------------------------KIEFVHMLNATACATTRVICAILETHQTETGVR 353
M + K+EFVHMLNAT CATTR ICAILE +QTE G+
Sbjct: 416 MMDKRKNNLRFSTQNKLEAMSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGII 475
Query: 354 IPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
+P+ LR+F+P + E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 476 VPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 518
>gi|296208728|ref|XP_002751220.1| PREDICTED: serine--tRNA ligase, cytoplasmic isoform 1 [Callithrix
jacchus]
Length = 512
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 249/501 (49%), Positives = 306/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDDSVPENVLNFDDLTADTLANLKVSQIKKVRVLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VR KYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCSVRNKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLREFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 474 APIDQEPSKKQKKQHEGSKKK 494
>gi|348586982|ref|XP_003479247.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like isoform 1 [Cavia
porcellus]
Length = 514
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/501 (49%), Positives = 307/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGG+P+ +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGNPDLIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDDSVPENVLNFDDLTADTLANLKVSQIKNVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RLKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GAIVAG RGYFLKG V L+ L+Q+AL + Y P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAIVAGSRGYFLKGVLVFLEQALIQFALRTLASRNYVPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLREFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 474 APIDQEPSKKQKKQHEGSKKK 494
>gi|1050527|emb|CAA62635.1| seryl-tRNA synthetase [Homo sapiens]
Length = 514
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/501 (49%), Positives = 307/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLSKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
API++E +KKQKKQ EG KKK
Sbjct: 474 APIEQEPSKKQKKQHEGSKKK 494
>gi|114558179|ref|XP_001148840.1| PREDICTED: serine--tRNA ligase, cytoplasmic isoform 9 [Pan
troglodytes]
gi|397473799|ref|XP_003808387.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Pan paniscus]
gi|410222666|gb|JAA08552.1| seryl-tRNA synthetase [Pan troglodytes]
gi|410252964|gb|JAA14449.1| seryl-tRNA synthetase [Pan troglodytes]
gi|410305834|gb|JAA31517.1| seryl-tRNA synthetase [Pan troglodytes]
gi|410356234|gb|JAA44524.1| seryl-tRNA synthetase [Pan troglodytes]
Length = 514
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/501 (49%), Positives = 307/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
API++E +KKQKKQ EG KKK
Sbjct: 474 APIEQEPSKKQKKQHEGSKKK 494
>gi|16306548|ref|NP_006504.2| serine--tRNA ligase, cytoplasmic [Homo sapiens]
gi|19860217|sp|P49591.3|SYSC_HUMAN RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|7768886|dbj|BAA95602.1| Seryl tRNA Synthetase [Homo sapiens]
gi|12653851|gb|AAH00716.1| Seryl-tRNA synthetase [Homo sapiens]
gi|119576773|gb|EAW56369.1| seryl-tRNA synthetase, isoform CRA_e [Homo sapiens]
gi|123982658|gb|ABM83070.1| seryl-tRNA synthetase [synthetic construct]
gi|123997327|gb|ABM86265.1| seryl-tRNA synthetase [synthetic construct]
gi|189053470|dbj|BAG35636.1| unnamed protein product [Homo sapiens]
gi|261859898|dbj|BAI46471.1| seryl-tRNA synthetase [synthetic construct]
Length = 514
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/501 (49%), Positives = 307/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
API++E +KKQKKQ EG KKK
Sbjct: 474 APIEQEPSKKQKKQHEGSKKK 494
>gi|378792521|pdb|3VBB|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Human At
2.9 Angstroms
gi|378792522|pdb|3VBB|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Human At
2.9 Angstroms
gi|378792523|pdb|3VBB|C Chain C, Crystal Structure Of Seryl-Trna Synthetase From Human At
2.9 Angstroms
gi|378792524|pdb|3VBB|D Chain D, Crystal Structure Of Seryl-Trna Synthetase From Human At
2.9 Angstroms
gi|378792525|pdb|3VBB|E Chain E, Crystal Structure Of Seryl-Trna Synthetase From Human At
2.9 Angstroms
gi|378792526|pdb|3VBB|F Chain F, Crystal Structure Of Seryl-Trna Synthetase From Human At
2.9 Angstroms
Length = 522
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/501 (49%), Positives = 307/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
API++E +KKQKKQ EG KKK
Sbjct: 474 APIEQEPSKKQKKQHEGSKKK 494
>gi|149025695|gb|EDL81938.1| seryl-aminoacyl-tRNA synthetase 1, isoform CRA_a [Rattus
norvegicus]
Length = 536
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/526 (48%), Positives = 312/526 (59%), Gaps = 135/526 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK----- 55
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 56 --------------------------FKNLCSKVI-----------------------GE 66
F +L + + GE
Sbjct: 61 SKTIGEKMKKKEPVGEDESIPEDVLNFDDLTADTLAALKVSQIKKVRLLVDEAIQKCDGE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFDEELYKVIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LPI+Y
Sbjct: 241 SQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYA 295
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G STCFRQ E+ +S
Sbjct: 296 GFSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSL 355
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKK
Sbjct: 356 GIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 415
Query: 318 MNE------------------------KIEFVHMLNATACATTRVICAILETHQTETGVR 353
M + K+EFVHMLNAT CATTR ICAILE +QTE G+
Sbjct: 416 MMDKRKNNLRFSTQNKLEAVSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIV 475
Query: 354 IPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
+P+ LR+F+P + E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 476 VPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 518
>gi|358337063|dbj|GAA55479.1| seryl-tRNA synthetase [Clonorchis sinensis]
Length = 563
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/465 (50%), Positives = 290/465 (62%), Gaps = 87/465 (18%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+DLFR EKGGDPE++R N++ RF+ V+ V++V+E D KWR+ R + D NK KNLC
Sbjct: 1 MVLDIDLFRLEKGGDPERIRDNERKRFRGVDRVNRVVETDEKWRKARFRGDTLNKVKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPG----------------------------NHLHPSVPVS 92
SK I +K K V D L N LHP VPVS
Sbjct: 61 SKAIAKKYKPLS-VDDLKRLSAFVDNEIKVNNELVVMHERTRNGLLYEVANLLHPEVPVS 119
Query: 93 NNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
NNED+N ++RT G ++ RK+YSHVDL+ M+DG + E GA VAGGRGYFLKGP V L+ +
Sbjct: 120 NNEDDNLVIRTFGKSDFRKQYSHVDLVVMVDGFEGERGASVAGGRGYFLKGPLVFLEQAV 179
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE-----KVGDSAP 207
+Q AL E+G+TPLYTPFFM K+ MQ VAQL+QFDEELYKV G+ E G S
Sbjct: 180 IQLALKMLHERGFTPLYTPFFMCKDAMQAVAQLSQFDEELYKVTGRREGGLKKSEGVSTT 239
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------- 253
E++E KYLIATSEQPI A HRD WL LPIRY G+STCFRQE
Sbjct: 240 EEEE---KYLIATSEQPIAAYHRDEWLATDQLPIRYAGISTCFRQEVGSHGRDTRGIFRV 296
Query: 254 ---------------------------------DLTKSIAYRVVNIVSGALNHAAAKKLD 280
I YR+V+IVSG LN+AAA K D
Sbjct: 297 HQFEKVEQFCITSPHDNLSWEMFHQMIANAEAFHQALGIPYRIVSIVSGELNNAAAMKYD 356
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
LEAWFPGSGAFRELVSCSNC DYQSRRL +RYGQTKKMN +E+VHMLNAT CATTRVIC
Sbjct: 357 LEAWFPGSGAFRELVSCSNCTDYQSRRLAIRYGQTKKMNRNVEYVHMLNATMCATTRVIC 416
Query: 341 AILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 385
AILE +QT+ G+ +P+ ++ ++P Y + IPF + APID+++
Sbjct: 417 AILENYQTDVGIVVPEAVKPWMPDAYQD---LIPFKRPAPIDQDK 458
>gi|197097784|ref|NP_001125910.1| serine--tRNA ligase, cytoplasmic [Pongo abelii]
gi|75070681|sp|Q5R9K9.3|SYSC_PONAB RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|55729644|emb|CAH91551.1| hypothetical protein [Pongo abelii]
Length = 514
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/501 (49%), Positives = 307/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKA---------- 50
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +A
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 51 ---------------------DNFNKFKNLCSKVIG-----------------------E 66
+N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
API++E +KKQKKQ EG KKK
Sbjct: 474 APIEQEPSKKQKKQHEGSKKK 494
>gi|332237491|ref|XP_003267937.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Nomascus leucogenys]
Length = 514
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/501 (49%), Positives = 307/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKA---------- 50
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +A
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 51 ---------------------DNFNKFKNLCSKVIG-----------------------E 66
+N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
API++E +KKQKKQ EG KKK
Sbjct: 474 APIEQEPSKKQKKQHEGSKKK 494
>gi|27806419|ref|NP_776600.1| serine--tRNA ligase, cytoplasmic [Bos taurus]
gi|18202925|sp|Q9GMB8.3|SYSC_BOVIN RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|9945026|gb|AAG03084.1|AF297553_1 seryl-tRNA synthetase [Bos taurus]
gi|296489322|tpg|DAA31435.1| TPA: seryl-tRNA synthetase [Bos taurus]
Length = 514
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/501 (49%), Positives = 306/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRH------------ 48
MVLDLDLFR +KGGDP +R++Q+ RFK+ LVD++++ D +WR+ R
Sbjct: 1 MVLDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 49 --------------------------------------KADNFNKFKNLCSKVI----GE 66
K K + L + I E
Sbjct: 61 SKTIGEKMKKKEPVGNDESIPEDVLNLDDLTADTLTNLKVSQIKKVRLLVDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + +S GN LHPSVP+S++ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFESLREIGNLLHPSVPISDDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+Q+AL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQFALRTLASRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + ++KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGILVPEKLKEFMPP-GLQEL--IPFVKA 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 474 APIDQEPSKKQKKQHEGSKKK 494
>gi|62896913|dbj|BAD96397.1| seryl-tRNA synthetase variant [Homo sapiens]
Length = 514
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/501 (49%), Positives = 307/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+L +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEELYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+ +HAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSSSHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
API++E +KKQKKQ EG KKK
Sbjct: 474 APIEQEPSKKQKKQHEGSKKK 494
>gi|33468931|ref|NP_035449.1| serine--tRNA ligase, cytoplasmic isoform 1 [Mus musculus]
gi|26349967|dbj|BAC38623.1| unnamed protein product [Mus musculus]
gi|148670022|gb|EDL01969.1| seryl-aminoacyl-tRNA synthetase, isoform CRA_b [Mus musculus]
Length = 536
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 253/525 (48%), Positives = 311/525 (59%), Gaps = 133/525 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK----- 55
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 56 --------------------------FKNLCSKVI-----------------------GE 66
F +L + + GE
Sbjct: 61 SKTIGEKMKKKEAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKCDGE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKGP V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGPLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT--- 315
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQT
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 316 ----------------KKMN-----EKIEFVHMLNATACATTRVICAILETHQTETGVRI 354
K M+ +K+EFVHMLNAT CATTR ICAILE +Q E G+ +
Sbjct: 417 MDKKKNNLRFSTQNKLKAMSSLFSPKKVEFVHMLNATMCATTRTICAILENYQAEKGIAV 476
Query: 355 PDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
P+ LR+F+P + E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 477 PEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 518
>gi|209489477|gb|ACI49235.1| hypothetical protein Csp3_JD06.001 [Caenorhabditis angaria]
Length = 486
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/494 (48%), Positives = 298/494 (60%), Gaps = 111/494 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+DLFR EKGG+PE +R++Q+ RFK+V LVD+VIE D WR+ R AD N+ KN+
Sbjct: 1 MVLDMDLFREEKGGNPELIRESQRKRFKDVTLVDQVIEWDQVWRKERFFADQLNRQKNVF 60
Query: 61 SK-----------------------------------------------VIGEKMKAKEP 73
SK ++ EK+ +
Sbjct: 61 SKAIGEKMKKKEAQGTDDSVEDEIVNRLSELKLDELSALTVVQLKKLRVLVDEKIVESKA 120
Query: 74 VGDSSTLP--------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
D++ + GN +H SV VS+NED N + RT GD +KKYSHVDL+ M+DG
Sbjct: 121 AMDAAEVARQEKLVQIGNLIHDSVVVSDNEDNNKVERTFGDITSKKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G +VAG RGYFLKGP V L+ ++Q AL + KGYTPLYTPFFMRKEVMQEVAQL
Sbjct: 181 DGERGTVVAGNRGYFLKGPLVFLEQAIIQLALQRLNGKGYTPLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFD+ELYKV GKG ++ GD +D+KYLIATSEQPI A HR+ W+ E+ LP++Y
Sbjct: 241 SQFDDELYKVSGKGSEIAGDQT-----IDEKYLIATSEQPIAAYHRNEWIKESDLPLKYA 295
Query: 245 GVSTCFRQEDLTKS---------------------------------------------- 258
GVSTCFRQE +
Sbjct: 296 GVSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCNPNDNESWTLFDEMIGNAESYYQEL 355
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y +VNIVS LN+AAAKK DLEAWFPGS AFRELVSCSNCLDYQ+RRL VRYGQTKK
Sbjct: 356 EIPYHIVNIVSAELNNAAAKKFDLEAWFPGSAAFRELVSCSNCLDYQARRLRVRYGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
++ ++FVHMLNAT CATTRVICAILE +QTETG+ +P +++++P Y IPFVK
Sbjct: 416 LDGDVQFVHMLNATMCATTRVICAILENNQTETGINVPKAIQQWMPENY---RTHIPFVK 472
Query: 378 TAPIDEEETKKQKK 391
APIDEE+ KK K
Sbjct: 473 PAPIDEEQKKKAGK 486
>gi|14424755|gb|AAH09390.1| Seryl-tRNA synthetase [Homo sapiens]
Length = 514
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/501 (49%), Positives = 306/501 (61%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKA---------- 50
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +A
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 51 ---------------------DNFNKFKNLCSKVIG-----------------------E 66
+N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATT ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTCTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
API++E +KKQKKQ EG KKK
Sbjct: 474 APIEQEPSKKQKKQHEGSKKK 494
>gi|427797879|gb|JAA64391.1| Putative seryl-trna synthetase, partial [Rhipicephalus pulchellus]
Length = 566
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/501 (50%), Positives = 306/501 (61%), Gaps = 113/501 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDL----------KWRQFRH-- 48
MVLDL+LFR +KGGDPEK+R+NQ+ RFK+ LVDKV++ D W + ++
Sbjct: 1 MVLDLELFRADKGGDPEKIRENQRRRFKDPGLVDKVVDADTVWRKLRHQLDNWNKLKNLC 60
Query: 49 ---------KADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP------------------ 81
K +N + +L V+ + + V S T+
Sbjct: 61 SKEIGQKMKKKENVGEGDHLPDSVVEKLSELTSEVLQSLTVNQIKRIRVLIDEAIVQCNK 120
Query: 82 ----------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
GN LH S VSN+EDEN +++T GD E +KKYSHVDLI MI+G+
Sbjct: 121 DLDTYEAERNAALREMGNWLHESCVVSNDEDENAVIKTHGDVETKKKYSHVDLIVMINGM 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D + G++ AGGRGY+L AV L+ L+Q AL KGY+PLYTPFFMRKEVMQEVAQL
Sbjct: 181 DGDRGSVTAGGRGYYLMNAAVFLEQALLQLALQMLHAKGYSPLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG GD A +D+KYLIATSEQPI A HRD WL +LPIRY G
Sbjct: 241 SQFDEELYKVIGKG---GDGA-----VDEKYLIATSEQPIAAFHRDEWLSPEALPIRYAG 292
Query: 246 VSTCFRQEDLTK-----------------------------------------------S 258
+S+CFRQE +
Sbjct: 293 ISSCFRQEVGSHGRDTRGIFRVHQFEKVEQFCITSPHDNKSWEMFDEMIGNAEEFCQKLG 352
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YRVV+IVSGALN+AAAKK DLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTKKM
Sbjct: 353 IPYRVVSIVSGALNNAAAKKHDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKM 412
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N + E+VHMLNAT CATTRVICAILE +QTE GV +P+ LR F+P Y IPFVK
Sbjct: 413 NAQTEYVHMLNATMCATTRVICAILENNQTEEGVIVPEALRPFMPPAYRE---MIPFVKP 469
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APIDE ETKKQ+K +EGM+KK
Sbjct: 470 APIDEAETKKQRKHREGMEKK 490
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 56/64 (87%)
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDC 357
SNCLDYQ+RRLLVRYGQTKKMN + E+VHMLNAT CATTRVICAILE +QTE GV +P+
Sbjct: 503 SNCLDYQARRLLVRYGQTKKMNAQTEYVHMLNATMCATTRVICAILENNQTEEGVIVPEA 562
Query: 358 LRKF 361
LR F
Sbjct: 563 LRPF 566
>gi|427789377|gb|JAA60140.1| Putative seryl-trna synthetase [Rhipicephalus pulchellus]
Length = 498
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/501 (50%), Positives = 306/501 (61%), Gaps = 113/501 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDL----------KWRQFRH-- 48
MVLDL+LFR +KGGDPEK+R+NQ+ RFK+ LVDKV++ D W + ++
Sbjct: 1 MVLDLELFRADKGGDPEKIRENQRRRFKDPGLVDKVVDADTVWRKLRHQLDNWNKLKNLC 60
Query: 49 ---------KADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP------------------ 81
K +N + +L V+ + + V S T+
Sbjct: 61 SKEIGQKMKKKENVGEGDHLPDSVVEKLSELTSEVLQSLTVNQIKRIRVLIDEAIVQCNK 120
Query: 82 ----------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
GN LH S VSN+EDEN +++T GD E +KKYSHVDLI MI+G+
Sbjct: 121 DLDTYEAERNAALREMGNWLHESCVVSNDEDENAVIKTHGDVETKKKYSHVDLIVMINGM 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D + G++ AGGRGY+L AV L+ L+Q AL KGY+PLYTPFFMRKEVMQEVAQL
Sbjct: 181 DGDRGSVTAGGRGYYLMNAAVFLEQALLQLALQMLHAKGYSPLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG GD A +D+KYLIATSEQPI A HRD WL +LPIRY G
Sbjct: 241 SQFDEELYKVIGKG---GDGA-----VDEKYLIATSEQPIAAFHRDEWLSPEALPIRYAG 292
Query: 246 VSTCFRQEDLTK-----------------------------------------------S 258
+S+CFRQE +
Sbjct: 293 ISSCFRQEVGSHGRDTRGIFRVHQFEKVEQFCITSPHDNKSWEMFDEMIGNAEEFCQKLG 352
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YRVV+IVSGALN+AAAKK DLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTKKM
Sbjct: 353 IPYRVVSIVSGALNNAAAKKHDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKM 412
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N + E+VHMLNAT CATTRVICAILE +QTE GV +P+ LR F+P Y IPFVK
Sbjct: 413 NAQTEYVHMLNATMCATTRVICAILENNQTEEGVIVPEALRPFMPPAYRE---MIPFVKP 469
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APIDE ETKKQ+K +EGM+KK
Sbjct: 470 APIDEAETKKQRKHREGMEKK 490
>gi|111494145|gb|AAI11399.1| SARS protein [Homo sapiens]
Length = 511
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/501 (49%), Positives = 305/501 (60%), Gaps = 112/501 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKA---------- 50
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +A
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 51 ---------------------DNFNKFKNLCSKVIG-----------------------E 66
+N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ KF+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPE---KFMPP-GLQEL--IPFVKP 470
Query: 379 APIDEEETKKQKKQKEGMKKK 399
API++E +KKQKKQ EG KKK
Sbjct: 471 APIEQEPSKKQKKQHEGSKKK 491
>gi|291398353|ref|XP_002715854.1| PREDICTED: seryl-tRNA synthetase isoform 1 [Oryctolagus cuniculus]
Length = 538
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 253/525 (48%), Positives = 310/525 (59%), Gaps = 133/525 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 52 -------------------------NFN----------------KFKNLCSKVI----GE 66
NF+ K + L + I E
Sbjct: 61 SKTIGEKMKKKEPVGDDESIPENVLNFDDVTADTLTNLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + +S GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFESLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLRNRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NE------------------------KIEFVHMLNATACATTRVICAILETHQTETGVRI 354
+ K+EFVHMLNAT CATTR ICAILE +QTE G+ +
Sbjct: 417 MDKRKNNLPLSAQNKLEATSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIV 476
Query: 355 PDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
P+ L++F+P + E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 477 PEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 518
>gi|402913100|ref|XP_003919064.1| PREDICTED: LOW QUALITY PROTEIN: serine--tRNA ligase, cytoplasmic
[Papio anubis]
Length = 539
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/526 (47%), Positives = 309/526 (58%), Gaps = 134/526 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFR------------- 47
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 48 ---------------------------------HKADNFN-------KFKNLCSKVI--- 64
H++ N N K + L + I
Sbjct: 61 SKTIGEKMKVRELRNKQPXEPERRYLILLLANVHRSSNSNLKVSQIKKVRLLIDEAILKC 120
Query: 65 -GEKMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMI 122
E++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+
Sbjct: 121 DAERIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMV 180
Query: 123 DGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEV 182
DG + E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEV
Sbjct: 181 DGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEV 240
Query: 183 AQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIR 242
AQL+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+
Sbjct: 241 AQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIK 296
Query: 243 YLGVSTCFRQ---------------------------------------------EDLTK 257
Y G+STCFRQ E+ +
Sbjct: 297 YAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQ 356
Query: 258 S--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT 315
S I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQT
Sbjct: 357 SLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQT 416
Query: 316 KKMNE----------------------KIEFVHMLNATACATTRVICAILETHQTETGVR 353
KKM + K+EFVHMLNAT CATTR ICAILE +QTE G+
Sbjct: 417 KKMMDKRKNNLHLSTQNKLEASLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIT 476
Query: 354 IPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
+P+ L++F+P + E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 477 VPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 519
>gi|195386010|ref|XP_002051697.1| GJ10873 [Drosophila virilis]
gi|194148154|gb|EDW63852.1| GJ10873 [Drosophila virilis]
Length = 501
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 250/489 (51%), Positives = 298/489 (60%), Gaps = 110/489 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKV--------------------------RKNQKDRFKNVELV- 33
MVLDLDLFR++KGG+P+ V R+++ D V+ V
Sbjct: 1 MVLDLDLFRSDKGGNPDAVRDNQKKRFKDVALVETVIEKDTEWRQRRHRADNLNKVKNVC 60
Query: 34 DKVIENDLKWRQ-----------------FRHKADNF-----NKFKNL---CSKVIGEKM 68
KVI +K ++ + AD N+ K L + E
Sbjct: 61 SKVIGEKMKKKEPVGSEGEEVPAAIRTDLTQVTADTLQPLTVNQIKQLRLLIDDAMTENQ 120
Query: 69 KAKEPVGDSSTLP----GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
KA E + GNHLH SVPVSN+EDEN + RT GD + R KYSHVDLI MIDG
Sbjct: 121 KALELAEQTRNTALREVGNHLHESVPVSNDEDENRVERTFGDCQKRGKYSHVDLIVMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+++E GA+V+GGRGYFL G AV L+ L+Q+AL + Y PLYTPFFMRKEVMQEVAQ
Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHALHLLYARDYVPLYTPFFMRKEVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKV+GKG + E+ D+KYLIATSEQPI A HRD WLPEASLPI+Y
Sbjct: 241 LSQFDEELYKVVGKGSERA----EESGTDEKYLIATSEQPIAAYHRDEWLPEASLPIKYA 296
Query: 245 GVSTCFRQE-----------------------DLTK------------------------ 257
G+STCFRQE LT
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSL 356
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YRVVNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQTKK
Sbjct: 357 GIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN +++VHMLNAT CA TRVICAILETHQTETGV++P+ L+KF+P+ Y + EIPFVK
Sbjct: 417 MNAAVDYVHMLNATMCAATRVICAILETHQTETGVKVPEPLKKFMPSKYQD---EIPFVK 473
Query: 378 TAPIDEEET 386
APID E+
Sbjct: 474 PAPIDLEQA 482
>gi|443700547|gb|ELT99428.1| hypothetical protein CAPTEDRAFT_157579 [Capitella teleta]
Length = 512
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/489 (48%), Positives = 297/489 (60%), Gaps = 110/489 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+++FR +KGGDP+K+R+NQ R+K+V LVDKV+E D +WR+ R +AD NK KNLC
Sbjct: 1 MVLDIEIFREDKGGDPKKIRENQAKRYKDVSLVDKVVEADSRWRKLRFQADELNKTKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGN-------------------HLHPSVPVSN-------- 93
SK IG+KMK K+P+G+ +LP L V +++
Sbjct: 61 SKTIGKKMKEKQPMGEDDSLPDAILSEQETLTAETAQGLSVVQLRRLVKITDDRIKQCNE 120
Query: 94 ----NEDENG------------------------IVRTKGDTEVRKKYSHVDLITMIDGV 125
NE E G IV+T GD KKYSHVDLI MIDGV
Sbjct: 121 DRIKNEYERGEALKEVANILHDSVPISDDEENNLIVKTWGDVTTTKKYSHVDLIHMIDGV 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D+E G + AGGRGY+LKGPAV L+ L+ AL + KGY PLY PFFMRKEVMQEVAQL
Sbjct: 181 DAERGTVTAGGRGYYLKGPAVFLEQALINLALKQLYTKGYKPLYVPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFD+ELYK++GKG + E+ +++KYLIATSEQP+ A HRD W+ LPI+Y G
Sbjct: 241 SQFDDELYKIVGKGSE----KAEESGVEEKYLIATSEQPLAAYHRDEWIATQDLPIKYAG 296
Query: 246 VSTCFRQE-----------------------------------------------DLTKS 258
STCFRQE + +
Sbjct: 297 TSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFCLCSPHDDESWKLFEEMLCNAETFNQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFP-GSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YR+V+IVSG LN++AAKK D+EAWFP G+GA+RELVSCSNCLDYQ+R L VRYGQTKK
Sbjct: 357 IPYRIVSIVSGELNNSAAKKNDIEAWFPSGNGAYRELVSCSNCLDYQARNLRVRYGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
M ++ E+VHMLNAT CATTRVICAI+E +Q E G+ +P+ LR +P Y +IPFVK
Sbjct: 417 MGQETEYVHMLNATMCATTRVICAIMENNQVEDGIIVPEVLRPLMPQDYQE---KIPFVK 473
Query: 378 TAPIDEEET 386
API++E T
Sbjct: 474 PAPIEQEVT 482
>gi|348586984|ref|XP_003479248.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like isoform 2 [Cavia
porcellus]
Length = 538
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/525 (47%), Positives = 307/525 (58%), Gaps = 133/525 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGG+P+ +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGNPDLIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDDSVPENVLNFDDLTADTLANLKVSQIKNVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RLKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GAIVAG RGYFLKG V L+ L+Q+AL + Y P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAIVAGSRGYFLKGVLVFLEQALIQFALRTLASRNYVPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NE------------------------KIEFVHMLNATACATTRVICAILETHQTETGVRI 354
+ K+EFVHMLNAT CATTR ICAILE +QTE G+ +
Sbjct: 417 MDKRKNNLRLSTQNNLVAVSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIV 476
Query: 355 PDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
P+ LR+F+P + E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 477 PEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 518
>gi|194760604|ref|XP_001962529.1| GF15510 [Drosophila ananassae]
gi|190616226|gb|EDV31750.1| GF15510 [Drosophila ananassae]
Length = 501
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/489 (50%), Positives = 298/489 (60%), Gaps = 114/489 (23%)
Query: 1 MVLDLDLFRTEKGGDPEKV-----------------------------RKNQKDRFKNVE 31
MVLDLDLFR++KGG+P+ + R + ++ KNV
Sbjct: 1 MVLDLDLFRSDKGGNPDAIRENQKKRFKDLALVETVISKDTEWRQCRHRADNLNKVKNV- 59
Query: 32 LVDKVIENDLKWRQF---------RHKADNF----------------NKFKNLCSKVIGE 66
KVI +K ++ + ADN + + L + E
Sbjct: 60 -CSKVIGEKMKKKEPVGPMSEEVPQAVADNLADITAETLQPLTVSQIKQVRILLDNAMTE 118
Query: 67 KMKAKEPVGDSSTLP----GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMI 122
K+ E + GNHLH SVPVSN+EDEN + RT GD E R KYSHVDLI MI
Sbjct: 119 NQKSLELAEQTRNTALREVGNHLHESVPVSNDEDENRVERTFGDCEKRGKYSHVDLIVMI 178
Query: 123 DGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEV 182
DG+++E GA+V+GGRGYFL G AV L+ L+Q+AL K YTPLYTPFFMRKEVMQEV
Sbjct: 179 DGMNAEKGAVVSGGRGYFLTGAAVFLEQALIQHALQLLYTKDYTPLYTPFFMRKEVMQEV 238
Query: 183 AQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIR 242
AQL+QFDEELYKV+GKG + E+ +D+KYLIATSEQPI A HRD WLPEASLPI+
Sbjct: 239 AQLSQFDEELYKVVGKGSE----KAEEVGVDEKYLIATSEQPIAAYHRDEWLPEASLPIK 294
Query: 243 YLGVSTCFRQE-----------------------DLTK---------------------- 257
Y G+STCFRQE LT
Sbjct: 295 YAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQ 354
Query: 258 --SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT 315
I YRVVNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQT
Sbjct: 355 SLGIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQT 414
Query: 316 KKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 375
KKMN +++VHMLNAT CA TRVICAILETHQTETG+++P+ L+K++PA + + EIPF
Sbjct: 415 KKMNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKFQD---EIPF 471
Query: 376 VKTAPIDEE 384
VK APID E
Sbjct: 472 VKPAPIDLE 480
>gi|195433819|ref|XP_002064904.1| GK14956 [Drosophila willistoni]
gi|194160989|gb|EDW75890.1| GK14956 [Drosophila willistoni]
Length = 502
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/350 (63%), Positives = 252/350 (72%), Gaps = 54/350 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GNHLH SVPVSN+EDEN + RT GD E R KYSHVDLI MIDG++SE GA+V+GGRGYFL
Sbjct: 138 GNHLHESVPVSNDEDENKVERTYGDCEKRSKYSHVDLIVMIDGMNSEKGAVVSGGRGYFL 197
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
GPAV L+ L+Q++L K Y PLYTPFFMRKEVMQEVAQL+QFDEELYKV+GKG +
Sbjct: 198 TGPAVFLEQALIQHSLHLLYAKDYVPLYTPFFMRKEVMQEVAQLSQFDEELYKVVGKGSE 257
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
+ A D+KYLIATSEQPI A HRD WLPEASLPI+Y G+STCFRQE
Sbjct: 258 KAEEAG----TDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLSTCFRQEVGSHGRDT 313
Query: 254 ---------------DLTK------------------------SIAYRVVNIVSGALNHA 274
LT I YRVVNIVSGALNHA
Sbjct: 314 RGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALNHA 373
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
A+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQTKKMN +++VHMLNAT CA
Sbjct: 374 ASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNASVDYVHMLNATLCA 433
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 384
TRVICAILETHQTETG+++P+ L+KF+PA Y + EIPFVK APID E
Sbjct: 434 ATRVICAILETHQTETGIKVPEPLKKFMPAKYQD---EIPFVKPAPIDLE 480
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR++KG +P+ VR NQK RFK+V LV+ VI D +WRQ RH+ADN NK KN+C
Sbjct: 1 MVLDLDLFRSDKGFNPDAVRDNQKKRFKDVALVETVISKDTEWRQCRHRADNLNKVKNVC 60
Query: 61 SKVIGEKMKAKEPVGD-SSTLPG 82
SKVIGEKMK KEPVG S LP
Sbjct: 61 SKVIGEKMKKKEPVGAMSEELPA 83
>gi|390466284|ref|XP_003733555.1| PREDICTED: serine--tRNA ligase, cytoplasmic isoform 2 [Callithrix
jacchus]
Length = 534
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/523 (47%), Positives = 306/523 (58%), Gaps = 131/523 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKA---------- 50
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +A
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 51 ---------------------DNFNKFKNLCSKVIG-----------------------E 66
+N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDDSVPENVLNFDDLTADTLANLKVSQIKKVRVLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VR KYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCSVRNKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NE----------------------KIEFVHMLNATACATTRVICAILETHQTETGVRIPD 356
+ K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+
Sbjct: 417 MDKRKNNLHLSTQNKLEASYFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPE 476
Query: 357 CLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
LR+F+P + E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 477 KLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 516
>gi|312079977|ref|XP_003142404.1| Sars1 protein [Loa loa]
Length = 484
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/490 (48%), Positives = 294/490 (60%), Gaps = 111/490 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+DLFR EKGGDPE +R +Q+ R+K+V LVD+VI+ D +WR+ R ADNFN+ NLC
Sbjct: 1 MVLDIDLFREEKGGDPELIRDSQQKRYKDVRLVDEVIDYDQRWRKERFSADNFNRLINLC 60
Query: 61 SKVIG------EKMKAKEPV-------------GDSSTLP-------------------- 81
SKVIG E + A PV D L
Sbjct: 61 SKVIGEKLKKKEAIDADNPVPTDYMERLEVLNADDMKNLEILQIKKLKSIIDKKLMEKKI 120
Query: 82 ----------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
GN +H +VP+S+NED N + +T GD E +KKYSHVDL MIDG
Sbjct: 121 EMEKLEAKRHQSLIQIGNIIHSTVPISDNEDNNKVEKTFGDIESKKKYSHVDLCVMIDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D + G +AGGRGYFLKGP V L+ ++ AL KG+ LYTPFFMRKEVMQEVAQL
Sbjct: 181 DGDRGTSIAGGRGYFLKGPLVFLEQAVINLALQMLHFKGFVTLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFD+ELYKV GKG E +GD D+KYLIATSEQPI A HR+ W+ EA LPI+Y
Sbjct: 241 SQFDQELYKVTGKGSEVIGDETN-----DEKYLIATSEQPIAAYHRNEWISEADLPIKYA 295
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+S+CFRQ ED K+
Sbjct: 296 GISSCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLCSPHDDESWKMLDEMVENAEDFCKAL 355
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I +R+V IVSG LN+AAAKKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYG+TKK
Sbjct: 356 GIPFRIVCIVSGELNNAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
++ ++ +VHMLN T CATTRV+CA+LE +Q E G+R+P+ LR+F+P Y IPF+K
Sbjct: 416 LDGEVSYVHMLNGTMCATTRVLCALLENYQEENGIRVPEILRQFMPYPY---KELIPFIK 472
Query: 378 TAPIDEEETK 387
API+ + K
Sbjct: 473 EAPIENDLKK 482
>gi|393908510|gb|EFO21667.2| seryl-tRNA synthetase [Loa loa]
Length = 484
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/490 (48%), Positives = 294/490 (60%), Gaps = 111/490 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+DLFR EKGGDPE +R +Q+ R+K+V LVD+VI+ D +WR+ R ADNFN+ NLC
Sbjct: 1 MVLDIDLFREEKGGDPELIRDSQQKRYKDVRLVDEVIDYDQRWRKERFSADNFNRLINLC 60
Query: 61 SKVIG------EKMKAKEPV-------------GDSSTLP-------------------- 81
SKVIG E + A PV D L
Sbjct: 61 SKVIGEKLKKKEAIDADNPVPTDYMERLEVLNADDMKNLEILQIKKLKSIIDKKLMEKKI 120
Query: 82 ----------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
GN +H +VP+S+NED N + +T GD E +KKYSH+DL MIDG
Sbjct: 121 EMEKLEAKRHQSLIQIGNIIHSTVPISDNEDNNKVEKTFGDIESKKKYSHIDLCVMIDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D + G +AGGRGYFLKGP V L+ ++ AL KG+ LYTPFFMRKEVMQEVAQL
Sbjct: 181 DGDRGTSIAGGRGYFLKGPLVFLEQAVINLALQMLHFKGFVTLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFD+ELYKV GKG E +GD D+KYLIATSEQPI A HR+ W+ EA LPI+Y
Sbjct: 241 SQFDQELYKVTGKGSEVIGDETN-----DEKYLIATSEQPIAAYHRNEWISEADLPIKYA 295
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+S+CFRQ ED K+
Sbjct: 296 GISSCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLCSPHDDESWKMLDEMVENAEDFCKAL 355
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I +R+V IVSG LN+AAAKKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYG+TKK
Sbjct: 356 GIPFRIVCIVSGELNNAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
++ ++ +VHMLN T CATTRV+CA+LE +Q E G+R+P+ LR+F+P Y IPF+K
Sbjct: 416 LDGEVSYVHMLNGTMCATTRVLCALLENYQEENGIRVPEILRQFMPYPY---KELIPFIK 472
Query: 378 TAPIDEEETK 387
API+ + K
Sbjct: 473 EAPIENDLKK 482
>gi|242008599|ref|XP_002425090.1| Seryl-tRNA synthetase, putative [Pediculus humanus corporis]
gi|212508755|gb|EEB12352.1| Seryl-tRNA synthetase, putative [Pediculus humanus corporis]
Length = 490
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/481 (49%), Positives = 290/481 (60%), Gaps = 112/481 (23%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR++KGG+ +KV++NQ+ RFKNV LV++VI D KWR+ RH ADN NK KNLC
Sbjct: 1 MVLDLDLFRSDKGGNVDKVKENQQKRFKNVALVEEVISCDTKWREARHVADNLNKIKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVS------------------------NNED 96
SK IGEKMK KE G +P + L ++ N D
Sbjct: 61 SKAIGEKMKNKESPGGGDAVPESILQKLSLLTLDDVKPLTVNQIKLIREAVDKKTEENND 120
Query: 97 ENGIVRTKGDTEVRKKYSH-------------------------------VDLITMIDGV 125
E + + ++ +R+ +H VDLI MIDG+
Sbjct: 121 EMSRLEKQRNSALREVGNHLHSSVPISNDEDENKVERTFGDCSTKKKYSHVDLIHMIDGM 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D + GA ++GGRGY+LKG AV LQ L+Q +L ++KG+ PLYTPFFM+KEVMQEVAQL
Sbjct: 181 DGDRGANISGGRGYYLKGAAVFLQHALIQLSLKMLLKKGFQPLYTPFFMKKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKV GKG EK +++KYLIATSEQPI A HRD W+PE +LPI+Y G
Sbjct: 241 SQFDEELYKVTGKG-------SEKGGVEEKYLIATSEQPIAAFHRDEWIPENNLPIKYAG 293
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 294 ISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEEFCQSLG 353
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YRVVNIVSGALNHAA+KKLDLEAWFPGS AFRELVSCSNCLDYQ+RRLLVRYGQTKKM
Sbjct: 354 IPYRVVNIVSGALNHAASKKLDLEAWFPGSEAFRELVSCSNCLDYQARRLLVRYGQTKKM 413
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N E+VHMLNAT CA TRVICA+LE HQ E G+ +P L++F+P Y N IPF+ +
Sbjct: 414 NAATEYVHMLNATMCAVTRVICAVLEVHQGEEGITVPTVLKEFMPEPYKN---IIPFISS 470
Query: 379 A 379
Sbjct: 471 G 471
>gi|119576772|gb|EAW56368.1| seryl-tRNA synthetase, isoform CRA_d [Homo sapiens]
Length = 539
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 247/526 (46%), Positives = 307/526 (58%), Gaps = 134/526 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKA---------- 50
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +A
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 51 ---------------------DNFNKFKNLCSKVIG-----------------------E 66
+N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEK-------------------------IEFVHMLNATACATTRVICAILETHQTETGVR 353
+K +EFVHMLNAT CATTR ICAILE +QTE G+
Sbjct: 417 MDKRKNNLHLSTQNKLEASLFSPKKVWVVEFVHMLNATMCATTRTICAILENYQTEKGIT 476
Query: 354 IPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
+P+ L++F+P + E IPFVK API++E +KKQKKQ EG KKK
Sbjct: 477 VPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQHEGSKKK 519
>gi|351708749|gb|EHB11668.1| Seryl-tRNA synthetase, cytoplasmic [Heterocephalus glaber]
Length = 538
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/525 (46%), Positives = 307/525 (58%), Gaps = 133/525 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKA---------- 50
MVLDLDLFR +KGG+P+ +R++Q+ RFK+ LVD++++ D +WR+ R +A
Sbjct: 1 MVLDLDLFRVDKGGNPDLIRESQEKRFKDPGLVDQLVKADSEWRRCRFQADNLNKLKNLC 60
Query: 51 ---------------------DNFNKFKNLCSKVIG-----------------------E 66
+N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVGDDDSVPENVLNFDDLTADTLASLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + + GN LHPSVP+SN+ED +N + R GD +RKKYSHVDL+ M+DG
Sbjct: 121 RLKLEAERFEKLREIGNLLHPSVPISNDEDADNKVERIWGDCTIRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GAIVAG RGYFLKG V L+ L+Q+AL + Y P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAIVAGSRGYFLKGSLVFLEQALIQFALRTLASRNYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDSKSWEMFEEMIATAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYG+TKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGKTKKM 416
Query: 319 NE------------------------KIEFVHMLNATACATTRVICAILETHQTETGVRI 354
+ K+EFVHMLNAT CATTR ICAILE +QTE G+ +
Sbjct: 417 MDKRRKNLYLPTQNNFVAVPSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIV 476
Query: 355 PDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
PD L++F+P + E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 477 PDKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 518
>gi|195034327|ref|XP_001988872.1| GH10337 [Drosophila grimshawi]
gi|193904872|gb|EDW03739.1| GH10337 [Drosophila grimshawi]
Length = 504
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/487 (49%), Positives = 297/487 (60%), Gaps = 110/487 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKV--------------------------RKNQKDRFKNVELV- 33
MVLDLDLFR +KGG+P+ V R+++ D V+ V
Sbjct: 1 MVLDLDLFRGDKGGNPDAVRDNQKKRFKDVGLVETVIAKDGEWRQRRHRADNLNKVKNVC 60
Query: 34 DKVIENDLKWRQ-----------FRHK--------------ADNFNKFKNLCSKVIGEKM 68
KVI + +K ++ R + + K + L + + +
Sbjct: 61 SKVIGDKMKKKEPVGAEEELPAAIRDEDLTLLTAELLQPLTVNQIKKLRVLIDEAMTDNQ 120
Query: 69 KAKEPVGDSSTLP----GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
K+ E + GNHLH SVPVSN+EDEN + RT GD R KYSHVDLI MIDG
Sbjct: 121 KSLELAEQTRNTALREVGNHLHESVPVSNDEDENRVERTFGDCAKRGKYSHVDLIVMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+++E GA+V+GGRGYFL G AV L+ L+Q+AL K Y PLYTPFFMRK+VMQEVAQ
Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHALHSLYAKDYLPLYTPFFMRKDVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKV+GKG + + A +D+KYLIATSEQPI A HRD WLPEASLPI+Y
Sbjct: 241 LSQFDEELYKVVGKGSERAEEAG----IDEKYLIATSEQPIAAYHRDEWLPEASLPIKYA 296
Query: 245 GVSTCFRQE-----------------------DLTK------------------------ 257
G+STCFRQE LT
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWQMMDEMIDNAEQFCQSL 356
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YR+VNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQTKK
Sbjct: 357 GIPYRIVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN +++VHMLNAT CA TRVICAILETHQTETG+++P+ L++++PA + + EIPFVK
Sbjct: 417 MNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKRYMPAKFQD---EIPFVK 473
Query: 378 TAPIDEE 384
APID E
Sbjct: 474 PAPIDLE 480
>gi|195114712|ref|XP_002001911.1| GI17096 [Drosophila mojavensis]
gi|193912486|gb|EDW11353.1| GI17096 [Drosophila mojavensis]
Length = 501
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/489 (50%), Positives = 297/489 (60%), Gaps = 110/489 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKV--------------------------RKNQKDRFKNVELV- 33
MVLDLDLFR +KGG+P+ V R+++ D V+ V
Sbjct: 1 MVLDLDLFRKDKGGNPDAVRENQKKRFKDVGLVETVIEKDTEWRQRRHRADNLNKVKNVC 60
Query: 34 DKVIENDLKWRQ------------FRH----------KADNFNKFKNL---CSKVIGEKM 68
KVI +K ++ R +A N+ K L + E
Sbjct: 61 SKVIGEKMKKKEPLGADGEEVPASVRSDLTQITAETLQALTVNQIKQLRLLIDDAMTENQ 120
Query: 69 KAKEPVGDSSTLP----GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
KA E + GNHLH SVPVSN+EDEN + RT GD R KYSHVDLI MIDG
Sbjct: 121 KALELAEQTRNTSLREVGNHLHESVPVSNDEDENRVERTFGDCTKRGKYSHVDLIVMIDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+++E GA+V+GGRGYFL G AV L+ ++Q+AL +K Y PLYTPFFMRKEVMQEVAQ
Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQAVIQHALHSLYQKDYVPLYTPFFMRKEVMQEVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKV+GKG + E+ D+KYLIATSEQPI A HRD WLPEASLPI+Y
Sbjct: 241 LSQFDEELYKVVGKGSERA----EESGTDEKYLIATSEQPIAAYHRDEWLPEASLPIKYA 296
Query: 245 GVSTCFRQE-----------------------DLTK------------------------ 257
G+STCFRQE LT
Sbjct: 297 GLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSL 356
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YR+VNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQTKK
Sbjct: 357 GIPYRIVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKK 416
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
MN +++VHMLNAT CA TRVICAILETHQTETG+++P+ L+K++P+ + + EIP+VK
Sbjct: 417 MNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKKYMPSKFQD---EIPYVK 473
Query: 378 TAPIDEEET 386
APID E+
Sbjct: 474 PAPIDLEQA 482
>gi|405956013|gb|EKC22875.1| Seryl-tRNA synthetase, cytoplasmic [Crassostrea gigas]
Length = 509
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/494 (48%), Positives = 299/494 (60%), Gaps = 117/494 (23%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQ---------------------KDRF------KNVELV 33
MVLD++LFR +KGG+P+K+++NQ K RF K L
Sbjct: 1 MVLDIELFRADKGGNPDKIKENQAKRFKDVTLVDKVVENDTQWRKKRFRADLLNKQKNLC 60
Query: 34 DKVIENDLKWRQ-----------FRHKADNFNKFK---------NLCSKVIGEKMKAKEP 73
KVI +K ++ + + F K + +I E+MK
Sbjct: 61 SKVIGEKMKAKEPAGENKTVPDSIKSNLEEFTKEQIQALTVVQIKETKSMIDEQMK---- 116
Query: 74 VGDSSTLP------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITM 121
+ D+ + NHLH S +SN+EDENGI RT GD E RKKYSHVDL+ M
Sbjct: 117 INDTELIKHEQERNEALKEVSNHLHESCIISNDEDENGIERTFGDCESRKKYSHVDLVVM 176
Query: 122 IDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE 181
+DGVD++ G++VAGGRGY+LKGP V L+ L+ A+ KGY PLYTPFFMRKEVMQE
Sbjct: 177 VDGVDNDRGSVVAGGRGYYLKGPLVFLEQALINLAMQSLYTKGYVPLYTPFFMRKEVMQE 236
Query: 182 VAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 241
VAQL+QFD+ELYKVIGKG + D ++ +D+KYLIATSEQPI A HRD W+P LPI
Sbjct: 237 VAQLSQFDDELYKVIGKGSEKAD----ENSVDEKYLIATSEQPIAAFHRDEWVPTDDLPI 292
Query: 242 RYLGVSTCFRQ---------------------------------------------EDLT 256
+YLG STCFRQ E+
Sbjct: 293 KYLGYSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLTSPFENKSWEMFDEMINNAEEFN 352
Query: 257 K--SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ 314
K I YR+VNIVSGALN+AA+KKLDLEAWFP SGAFRELVSCSNCLDYQ+RRL VRYGQ
Sbjct: 353 KLLGIPYRIVNIVSGALNNAASKKLDLEAWFPASGAFRELVSCSNCLDYQARRLKVRYGQ 412
Query: 315 TKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIP 374
TKKMN++ ++VHMLNAT CATTR ICAILE +Q E GV +P+ LRK++P Y NE ++P
Sbjct: 413 TKKMNQEADYVHMLNATMCATTRTICAILENYQVEDGVIVPEALRKYMPPGY-NE--KLP 469
Query: 375 FVKTAPIDEEETKK 388
FVK APID+EE+KK
Sbjct: 470 FVKPAPIDQEESKK 483
>gi|312385249|gb|EFR29798.1| hypothetical protein AND_01002 [Anopheles darlingi]
Length = 503
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/351 (61%), Positives = 252/351 (71%), Gaps = 56/351 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GNHLH SVPVSN+EDEN + RT G+ E R++YSHVDLI MIDG++ + GA+V+GGRGYFL
Sbjct: 138 GNHLHESVPVSNDEDENRVERTFGNCEQRQRYSHVDLIVMIDGMNGDKGAVVSGGRGYFL 197
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
GPAV L+ L+Q+AL K YTPLYTPFFMRKEVMQEVAQL+QFDEELYKV+GK
Sbjct: 198 TGPAVFLEQALIQHALHSLYTKDYTPLYTPFFMRKEVMQEVAQLSQFDEELYKVVGK--- 254
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
S+ E+ D+KYLIATSEQPI A HRD W+ E++LPI+Y G+STCFRQE
Sbjct: 255 ---SSGEEGATDEKYLIATSEQPIAAYHRDEWIAESTLPIKYAGLSTCFRQEVGSHGRDT 311
Query: 254 ---------------DLTK------------------------SIAYRVVNIVSGALNHA 274
LT I YRVVNIVSGALNHA
Sbjct: 312 RGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEAFCQSLGIPYRVVNIVSGALNHA 371
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKKLDLEAWF GSGAFRELVSCSNCLDYQ+RRLLVRYGQTKKMN +++VHMLNAT CA
Sbjct: 372 AAKKLDLEAWFAGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHMLNATMCA 431
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 385
TTRVICAILETHQTETG+++P+ L+K++P Y EIPFVK APID E+
Sbjct: 432 TTRVICAILETHQTETGIKVPEVLQKYMPEKYRE---EIPFVKPAPIDVEQ 479
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 60/78 (76%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR++KG DP K+R+NQ RFK+V LV+ VIE D KWR R DN+NK KNLC
Sbjct: 1 MVLDLDLFRSDKGHDPAKIRENQTRRFKDVALVETVIEQDKKWRACRFNMDNYNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSS 78
SK IGEKMK KEP GD +
Sbjct: 61 SKEIGEKMKKKEPQGDEA 78
>gi|440909687|gb|ELR59572.1| Seryl-tRNA synthetase, cytoplasmic [Bos grunniens mutus]
Length = 542
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 247/529 (46%), Positives = 306/529 (57%), Gaps = 137/529 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRH------------ 48
MVLDLDLFR +KGGDP +R++Q+ RFK+ LVD++++ D +WR+ R
Sbjct: 1 MVLDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 49 --------------------------------------KADNFNKFKNLCSKVI----GE 66
K K + L + I E
Sbjct: 61 SKTIGEKMKVREPMGNDESIPEDVLNLDDLTADTLTNLKVSQIKKVRLLVDEAILKCDTE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + +S GN LHPSVP+S++ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFESLREIGNLLHPSVPISDDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+Q+AL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQFALRTLAIRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + ++KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEK----------------------------IEFVHMLNATACATTRVICAILETHQTET 350
+K +EFVHMLNAT CATTR ICAILE +QTE
Sbjct: 417 MDKVRWSLRRQAVGPFSTEWSHLILAFGGHHVEFVHMLNATMCATTRTICAILENYQTEK 476
Query: 351 GVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 477 GILVPEKLKEFMPP-GLQEL--IPFVKAAPIDQEPSKKQKKQHEGSKKK 522
>gi|332025907|gb|EGI66063.1| Seryl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
Length = 493
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 251/500 (50%), Positives = 301/500 (60%), Gaps = 109/500 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVR--------------------------KNQKDRFKNVE-LV 33
MVLDLD FR +KG DPEK+R +++ D F ++ L
Sbjct: 1 MVLDLDFFRKDKGFDPEKIRENQKKRFKDVELVDTVIEKDKHWRQLRHRADNFNKLKNLC 60
Query: 34 DKVIENDLKWRQFRHKADNFNK-----FKNLCSKVI----------------------GE 66
K I +K ++ DN ++ NL S+ + E
Sbjct: 61 SKEIGEKMKRKEPLGDDDNVSQAIVDNLDNLTSESLKALTVTQIKKIRTLIDDAIQKNDE 120
Query: 67 KMKAKEPVGDSSTLP-GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
+K E +++ GNHLH SVPVSN+E+EN + RT G+ +KKYSHVDLI MIDG+
Sbjct: 121 NLKTTELERNAALREVGNHLHESVPVSNDEEENKVERTWGNCIDKKKYSHVDLIHMIDGM 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G V+GGRGYFL GPA+ LQ L+Q AL K + GY PLYTPF MRK+ MQEVAQL
Sbjct: 181 DGERGTNVSGGRGYFLTGPAIFLQQALIQLALRKLFKTGYKPLYTPFIMRKDAMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + E E+++KYLIATSEQPI A HR W+ E +LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSERN----EDKEMEEKYLIATSEQPIAAFHRGEWIAENALPIKYAG 296
Query: 246 VSTCFRQED-----------------------LTK------------------------S 258
+STCFRQE LT
Sbjct: 297 ISTCFRQEVGSHGRDTRGIFRVHQFEKIEQFCLTSPHDNKSWEMMEEMISNAEKFYQALD 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YR+VNIVSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTKKM
Sbjct: 357 IPYRIVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N ++VHMLNAT CA TRVICAILE HQTETG+++P L ++P+ Y N EIPFVK
Sbjct: 417 NTTTDYVHMLNATMCAVTRVICAILEVHQTETGIKVPKILADYMPSEYEN---EIPFVKA 473
Query: 379 APIDEEETKKQKKQKEGMKK 398
APIDE ETKKQKKQKE + K
Sbjct: 474 APIDEIETKKQKKQKENVSK 493
>gi|344275584|ref|XP_003409592.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Loxodonta
africana]
Length = 514
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/501 (48%), Positives = 296/501 (59%), Gaps = 109/501 (21%)
Query: 1 MVLDLDLFRTEKGGDPE-----------------------------KVRKNQKDRFKN-- 29
MVLDLDLFR +KGGDP + R + ++ KN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPRLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 30 -------------VELVDKVIENDLKWRQFRH------KADNFNKFKNLCSKVI----GE 66
VE + + EN L K K + L + I E
Sbjct: 61 SKTIGEKMKQKEPVEDDESIPENVLNLDDLTAETLTSLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLESERFENLREIGNLLHPSVPISNDEDADNKVERMWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKGP V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGPLVFLEQALIQYALRTLASRGYIPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
VSTCFRQ E+ +S
Sbjct: 297 VSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIGTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQT+KM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTRKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 473
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG K K
Sbjct: 474 APIDQEPSKKQKKQHEGSKNK 494
>gi|387018622|gb|AFJ51429.1| Seryl-tRNA synthetase, cytoplasmic-like [Crotalus adamanteus]
Length = 514
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/503 (49%), Positives = 298/503 (59%), Gaps = 113/503 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKV-----------------------------RKNQKDRFKNVE 31
MVLDLDLFR +KGGDPE V R + ++ KN
Sbjct: 1 MVLDLDLFRADKGGDPELVREMQLKRFKDPALVDALVAADGAWRRCRFRADNLNKLKN-- 58
Query: 32 LVDKVIENDLKWRQFRHKADNF-NKFKNLCSKVIG------------------------- 65
L K I +K ++ +DN + +NL I
Sbjct: 59 LCSKTIGEKMKKKEPVGNSDNIPDHAQNLDELTIDILTSLQVSQIKKIRLLIDEAVLKCD 118
Query: 66 -EKMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMID 123
E++K + ++ GN LHPSVP+SN+ED +N R G+ RKKYSHVDL+ M+D
Sbjct: 119 EERLKLEAERFENLREIGNLLHPSVPISNDEDVDNKEERIWGNCTERKKYSHVDLVVMVD 178
Query: 124 GVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA 183
G + E GA+VAG RGYFLKGP V L+ L+QYAL + KGYTP+YTPFFMRKEVMQEVA
Sbjct: 179 GYEGEKGAVVAGSRGYFLKGPLVFLEQALIQYALQTLLSKGYTPVYTPFFMRKEVMQEVA 238
Query: 184 QLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRY 243
QL+QFDEELYKV+GKG + D + +D+KYLIATSEQPI A+HRD WL LPI+Y
Sbjct: 239 QLSQFDEELYKVLGKGSEKSDD----NTVDEKYLIATSEQPIAALHRDEWLKPEDLPIKY 294
Query: 244 LGVSTCFRQE-------------------------------------DLTKSIA------ 260
G+STCFRQE D S+A
Sbjct: 295 AGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMISVAEEFYQS 354
Query: 261 ----YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK 316
Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK
Sbjct: 355 LGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTK 414
Query: 317 KMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 376
KM +K+EFVHMLNAT CATTR ICAILE +QTE G+ IPD L+ F+P + I FV
Sbjct: 415 KMMDKVEFVHMLNATMCATTRAICAILENYQTEEGIIIPDKLKDFMP---LGLKEMIKFV 471
Query: 377 KTAPIDEEETKKQKKQKEGMKKK 399
K APID+E +KKQKKQ EG KKK
Sbjct: 472 KPAPIDQELSKKQKKQHEGGKKK 494
>gi|391345704|ref|XP_003747124.1| PREDICTED: probable serine--tRNA ligase, cytoplasmic-like isoform 1
[Metaseiulus occidentalis]
Length = 485
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/483 (48%), Positives = 290/483 (60%), Gaps = 109/483 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKV--IENDLK--------WRQFRHK- 49
MVL+LD FR +KGG EK+RKNQ DRFK+V LVDKV ++N+ + W + R+
Sbjct: 1 MVLELDDFRDDKGGSAEKIRKNQADRFKDVTLVDKVVELDNEWRRQRHVLDQWNKLRNSC 60
Query: 50 -----------------------------------ADNFNKFKNLCSKVIGEKMKA---- 70
A + N+ K + K I E +++
Sbjct: 61 SKAIGDKKKKKEADGEGDLPGDFALSHELLNDAISALSINQIKTVVGK-IAEAIESTNVR 119
Query: 71 ----KEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVD 126
+ ++ N L V +S+NED N ++RT GD KKYSHVDLI MIDG+D
Sbjct: 120 LVELETERNENLREVANWLGKDVVISDNEDNNAVIRTYGDCTTSKKYSHVDLIVMIDGMD 179
Query: 127 SEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLA 186
+ G +VAGGRGYFLKG AV L+ L+Q AL ++KG+TPLYTPFFMRK VMQ+VAQL+
Sbjct: 180 GDRGTVVAGGRGYFLKGAAVFLEQALIQLALQSLLKKGFTPLYTPFFMRKAVMQQVAQLS 239
Query: 187 QFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGV 246
QFDEELYKV+GKG + D + E+D+KYLIATSEQPICA H+D WL A LPI+Y G+
Sbjct: 240 QFDEELYKVVGKGSEKAD----EKEVDEKYLIATSEQPICAFHKDEWLSPADLPIKYAGL 295
Query: 247 STCFRQEDLTK-----------------------------------------------SI 259
STCFRQE + ++
Sbjct: 296 STCFRQEVGSHGRDTRGIFRVHQFEKIEQFVITSPLDDESWKAFDEMIGNAEAFCQALNL 355
Query: 260 AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMN 319
YR+VNIVSGALN+AAAKK DLEAWFP SGAFRELVSCSNCLDYQSRRL +RYGQTKKMN
Sbjct: 356 PYRIVNIVSGALNNAAAKKFDLEAWFPASGAFRELVSCSNCLDYQSRRLQIRYGQTKKMN 415
Query: 320 EKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTA 379
EK +VHMLNAT CATTRVIC ILE Q E G+R+P+ LR ++P + +IPFVK A
Sbjct: 416 EKTPYVHMLNATMCATTRVICCILENCQEEDGIRVPEALRPWMPEQFRE---KIPFVKPA 472
Query: 380 PID 382
PID
Sbjct: 473 PID 475
>gi|355717852|gb|AES06074.1| seryl-tRNA synthetase [Mustela putorius furo]
Length = 444
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/366 (59%), Positives = 255/366 (69%), Gaps = 55/366 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 66 GNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYF 125
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 126 LKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 185
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
+ D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQ
Sbjct: 186 EKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRD 241
Query: 253 -------------------------------------EDLTKS--IAYRVVNIVSGALNH 273
ED +S I Y +VNIVSG+LNH
Sbjct: 242 TRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMISTAEDFYQSLGIPYHIVNIVSGSLNH 301
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K+EFVHMLNAT C
Sbjct: 302 AASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMC 361
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
ATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 362 ATTRTICAILENYQTEEGIVVPEKLREFMPPG-LQEL--IPFVKPAPIDQEPSKKQKKQH 418
Query: 394 EGMKKK 399
EG KKK
Sbjct: 419 EGSKKK 424
>gi|426216134|ref|XP_004002322.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Ovis aries]
Length = 514
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 244/503 (48%), Positives = 298/503 (59%), Gaps = 113/503 (22%)
Query: 1 MVLDLDLFRTEKGG--------------DPEKV---------------RKNQKDRFKNVE 31
MVLDLDLFR +KGG DP V R + ++ KN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRESQEKRFKDPALVDQLVNADSEWRRCRFRADNLNKLKN-- 58
Query: 32 LVDKVIENDLKWRQ-----------------------FRHKADNFNKFKNLCSKVI---- 64
L K I +K ++ K K + L + I
Sbjct: 59 LCSKTIGEKMKKKEPVENDESIPEDVLNLDDLTVDTLTNLKVSQIKKVRLLLDEAILKCD 118
Query: 65 GEKMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMID 123
E++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+D
Sbjct: 119 AERIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVD 178
Query: 124 GVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA 183
G + E GA+VAG RGYFLKGP V L+ L+Q+AL +GYTP+YTPFFMRKEVMQEVA
Sbjct: 179 GFEGEKGAVVAGSRGYFLKGPLVFLEQALIQFALRTLESRGYTPIYTPFFMRKEVMQEVA 238
Query: 184 QLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRY 243
QL+QFDEELYKVIGKG + D + ++KYLIATSEQPI A+HRD WL LPI+Y
Sbjct: 239 QLSQFDEELYKVIGKGSERSDD----NSFEEKYLIATSEQPIAALHRDEWLRPEDLPIKY 294
Query: 244 LGVSTCFRQ---------------------------------------------EDLTKS 258
G+STCFRQ E+ +S
Sbjct: 295 AGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQS 354
Query: 259 --IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK 316
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK
Sbjct: 355 LGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTK 414
Query: 317 KMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 376
KM +K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFV
Sbjct: 415 KMMDKVEFVHMLNATMCATTRTICAILENYQTEKGILVPEKLKEFMPP-GLQEL--IPFV 471
Query: 377 KTAPIDEEETKKQKKQKEGMKKK 399
K APID+E +KKQKKQ EG KKK
Sbjct: 472 KAAPIDQEPSKKQKKQHEGSKKK 494
>gi|391345706|ref|XP_003747125.1| PREDICTED: probable serine--tRNA ligase, cytoplasmic-like isoform 2
[Metaseiulus occidentalis]
Length = 492
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/489 (48%), Positives = 291/489 (59%), Gaps = 114/489 (23%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKV--IENDLK--------WRQFRHK- 49
MVL+LD FR +KGG EK+RKNQ DRFK+V LVDKV ++N+ + W + R+
Sbjct: 1 MVLELDDFRDDKGGSAEKIRKNQADRFKDVTLVDKVVELDNEWRRQRHVLDQWNKLRNSC 60
Query: 50 -----------------------------------ADNFNKFKNL---CSKVIGEKMKAK 71
A + N+ K + +V+G+ +A
Sbjct: 61 SKAIGDKKKKKEADGEGDLPGDFALSHELLNDAISALSINQIKTVKITLHQVVGKIAEAI 120
Query: 72 EPVG-----------DSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLIT 120
E ++ N L V +S+NED N ++RT GD KKYSHVDLI
Sbjct: 121 ESTNVRLVELETERNENLREVANWLGKDVVISDNEDNNAVIRTYGDCTTSKKYSHVDLIV 180
Query: 121 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQ 180
MIDG+D + G +VAGGRGYFLKG AV L+ L+Q AL ++KG+TPLYTPFFMRK VMQ
Sbjct: 181 MIDGMDGDRGTVVAGGRGYFLKGAAVFLEQALIQLALQSLLKKGFTPLYTPFFMRKAVMQ 240
Query: 181 EVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 240
+VAQL+QFDEELYKV+GKG + D + E+D+KYLIATSEQPICA H+D WL A LP
Sbjct: 241 QVAQLSQFDEELYKVVGKGSEKAD----EKEVDEKYLIATSEQPICAFHKDEWLSPADLP 296
Query: 241 IRYLGVSTCFRQEDLTK------------------------------------------- 257
I+Y G+STCFRQE +
Sbjct: 297 IKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVITSPLDDESWKAFDEMIGNAEAF 356
Query: 258 ----SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG 313
++ YR+VNIVSGALN+AAAKK DLEAWFP SGAFRELVSCSNCLDYQSRRL +RYG
Sbjct: 357 CQALNLPYRIVNIVSGALNNAAAKKFDLEAWFPASGAFRELVSCSNCLDYQSRRLQIRYG 416
Query: 314 QTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEI 373
QTKKMNEK +VHMLNAT CATTRVIC ILE Q E G+R+P+ LR ++P + +I
Sbjct: 417 QTKKMNEKTPYVHMLNATMCATTRVICCILENCQEEDGIRVPEALRPWMPEQFRE---KI 473
Query: 374 PFVKTAPID 382
PFVK APID
Sbjct: 474 PFVKPAPID 482
>gi|389614616|dbj|BAM20344.1| seryl-tRNA synthetase [Papilio polytes]
Length = 429
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/351 (61%), Positives = 249/351 (70%), Gaps = 56/351 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GNHLHPSVPV ++ED N + RT GD VR+KYSHVDLI MIDG+D + G VAGGRGY+L
Sbjct: 71 GNHLHPSVPVDDDEDHNLVERTFGDCTVRQKYSHVDLICMIDGMDGDRGTAVAGGRGYYL 130
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG-E 200
KGPAV L+ L+Q +L ++KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV+GKG E
Sbjct: 131 KGPAVFLEQALIQLSLRILLKKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVVGKGSE 190
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
GD+ +++KYLIATSEQPI A HRD WL E+SLPIRY G+STCFRQ
Sbjct: 191 NKGDNI-----IEEKYLIATSEQPIAAYHRDEWLAESSLPIRYAGLSTCFRQEVGSHGRD 245
Query: 253 -------------------------------------EDL--TKSIAYRVVNIVSGALNH 273
ED T I YR+VNIVSGALNH
Sbjct: 246 TRGIFRVHQFEKVEQFVLTSPHDDASWKMMDEMIGNAEDFYQTLGIPYRIVNIVSGALNH 305
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AAAKKLDLEAWFPGSGAFRELVSCSNCL+YQ+RRLLVRYGQTKKMN E+VHMLNAT C
Sbjct: 306 AAAKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMC 365
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 384
ATTRVICA+LE +QTE G+++P+ L+ ++P Y IPFVK APID E
Sbjct: 366 ATTRVICAVLECNQTEEGIKVPEILKPWMPEQYQE---LIPFVKPAPIDLE 413
>gi|73959359|ref|XP_866214.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic isoform 3 [Canis
lupus familiaris]
Length = 513
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/502 (49%), Positives = 297/502 (59%), Gaps = 112/502 (22%)
Query: 1 MVLDLDLFRTEKGG--------------DPEKV---------------RKNQKDRFKNVE 31
MVLDLDLFR +KGG DP V R + ++ KN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVRADGEWRRCRFRADNLNKLKN-- 58
Query: 32 LVDKVIENDLKWRQ----------------------FRHKADNFNKFKNLCSKVI----G 65
L K I +K ++ K K + L + I
Sbjct: 59 LCSKTIGEKMKKKEPVGDESIPEDALNLDDLTADTLANLKVSQIKKVRLLIDEAILKCDA 118
Query: 66 EKMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDG 124
E++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 119 ERIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDG 178
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQ
Sbjct: 179 FEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQ 238
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y
Sbjct: 239 LSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYA 294
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+STCFRQ ED +S
Sbjct: 295 GLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSL 354
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKK
Sbjct: 355 GIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 414
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
M +K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 415 MMDKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVK 471
Query: 378 TAPIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 472 PAPIDQEPSKKQKKQHEGSKKK 493
>gi|345308976|ref|XP_001510792.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Ornithorhynchus
anatinus]
Length = 493
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/386 (56%), Positives = 260/386 (67%), Gaps = 55/386 (14%)
Query: 62 KVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLIT 120
K GE+ K + +S GN LHPSVP+SN+ED +N + + GD VRKKYSHVDL+
Sbjct: 95 KCDGERQKLEAERFESLREIGNLLHPSVPISNDEDADNKVEKVWGDCTVRKKYSHVDLVV 154
Query: 121 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQ 180
M+DG + E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQ
Sbjct: 155 MVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQ 214
Query: 181 EVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 240
EVAQL+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LP
Sbjct: 215 EVAQLSQFDEELYKVIGKGSEKADD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLP 270
Query: 241 IRYLGVSTCFRQEDLTK------------------------------------------- 257
I+Y G+STCFRQE +
Sbjct: 271 IKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIGTAEEF 330
Query: 258 ----SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG 313
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYG
Sbjct: 331 YQALGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYG 390
Query: 314 QTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEI 373
QTKKM +K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR+F+P + I
Sbjct: 391 QTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLRQFMPP---DLQELI 447
Query: 374 PFVKTAPIDEEETKKQKKQKEGMKKK 399
PFVK APID+E +KKQKKQ EG KKK
Sbjct: 448 PFVKAAPIDQEPSKKQKKQHEGGKKK 473
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 30/42 (71%)
Query: 44 RQFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLPGNHL 85
R R +ADN NK KNLCSK IGEKMK KEPVG ++P N L
Sbjct: 23 RGSRFRADNLNKLKNLCSKTIGEKMKKKEPVGGEESIPENAL 64
>gi|327271375|ref|XP_003220463.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Anolis
carolinensis]
Length = 514
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/366 (59%), Positives = 253/366 (69%), Gaps = 55/366 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GAIVAG RGYF
Sbjct: 136 GNLLHPSVPISNDEDVDNKVERLWGDCTVRKKYSHVDLVVMVDGYEGEKGAIVAGSRGYF 195
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKGP V L+ L+QYAL + KGYTP+YTPFFMRKEVMQEVAQL+QFDEELYKV+GKG
Sbjct: 196 LKGPLVFLEQALIQYALQMLLSKGYTPVYTPFFMRKEVMQEVAQLSQFDEELYKVLGKGS 255
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
+ D + +D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQ
Sbjct: 256 ERSDD----NTIDEKYLIATSEQPIAALHRDEWLKPEDLPIKYAGLSTCFRQEVGSHGRD 311
Query: 253 -------------------------------------EDLTKS--IAYRVVNIVSGALNH 273
E+ +S I Y +VNIVSG+LNH
Sbjct: 312 TRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGSLNH 371
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AA+KKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYGQTKKM +K+EFVHMLNAT C
Sbjct: 372 AASKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMC 431
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
ATTR ICAILE +QTE G+ IP+ LR F+P I FVK APID+E +KKQKKQ
Sbjct: 432 ATTRAICAILENYQTEEGIVIPEKLRDFMPP---GLKEMIKFVKAAPIDQELSKKQKKQH 488
Query: 394 EGMKKK 399
EG KKK
Sbjct: 489 EGGKKK 494
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDPE VR+ Q+ RFK+ LVD ++E D WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRADKGGDPELVRETQRKRFKDPALVDALVEADGAWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGN 83
SK IGEKMK KEPVG+ +P N
Sbjct: 61 SKTIGEKMKKKEPVGNDDCIPEN 83
>gi|301767668|ref|XP_002919248.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Ailuropoda
melanoleuca]
Length = 513
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/502 (48%), Positives = 297/502 (59%), Gaps = 112/502 (22%)
Query: 1 MVLDLDLFRTEKGG--------------DPEKV---------------RKNQKDRFKNVE 31
MVLDLDLFR +KGG DP V R + ++ KN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADGEWRRCRFRADNLNKLKN-- 58
Query: 32 LVDKVIENDLKWRQ----------------------FRHKADNFNKFKNLCSKVI----G 65
L K I +K ++ K K + L + I
Sbjct: 59 LCSKTIGEKMKKKEPVGDESIPEDVLNLDDLTADTLANLKVSQIKKVRLLIDEAILKCDA 118
Query: 66 EKMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDG 124
E++K + ++ GN LHPSVP+SN+ED +N + R GD +RKKYSHVDL+ M+DG
Sbjct: 119 ERIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTIRKKYSHVDLVVMVDG 178
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQ
Sbjct: 179 FEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQ 238
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y
Sbjct: 239 LSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYA 294
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+STCFRQ ED +S
Sbjct: 295 GLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSL 354
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKK
Sbjct: 355 GIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 414
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
M +K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 415 MMDKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVK 471
Query: 378 TAPIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 472 PAPIDQEPSKKQKKQHEGSKKK 493
>gi|444724738|gb|ELW65336.1| Seryl-tRNA synthetase, cytoplasmic [Tupaia chinensis]
Length = 514
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/366 (59%), Positives = 256/366 (69%), Gaps = 55/366 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 136 GNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYF 195
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 196 LKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 255
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
+ D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQ
Sbjct: 256 EKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRD 311
Query: 253 -------------------------------------EDLTKS--IAYRVVNIVSGALNH 273
E+ +S I Y +VNIVSG+LNH
Sbjct: 312 TRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNH 371
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K+EFVHMLNAT C
Sbjct: 372 AASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMC 431
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
ATTR ICAILE +QTE G+ +P+ L++F+P+ + E IPFVK APID+E +KKQKKQ
Sbjct: 432 ATTRTICAILENYQTEEGIIVPEKLKEFMPS-GLQEL--IPFVKPAPIDQEPSKKQKKQH 488
Query: 394 EGMKKK 399
EG KKK
Sbjct: 489 EGSKKK 494
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 67/86 (77%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLH 86
SK IGEKMK KEPVG+ ++P + LH
Sbjct: 61 SKTIGEKMKKKEPVGEDESVPEDALH 86
>gi|226471436|emb|CAX70799.1| Seryl tRNA Synthetase [Schistosoma japonicum]
Length = 479
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/470 (47%), Positives = 280/470 (59%), Gaps = 107/470 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDP+ +R N+ RF+ +LVD V+E D WR+ R +AD+ NK KNLC
Sbjct: 1 MVLDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVDLVVEADENWRKARFRADHLNKVKNLC 60
Query: 61 SKVIGEKMKAKEPVGDS------------------------------------------- 77
SK I +++K + D
Sbjct: 61 SKAIAKRIKDNDDSPDCEITIFKGVLERLDSLADVDLQPLSIAQLKSLSCFIDEEIKTNA 120
Query: 78 ------STLPGNHLH-------PSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
++ +HL+ P VP+S +E++N I+RT G ++ RK SHVDL+ M+DG
Sbjct: 121 ASLIELESIRQHHLYEIGNLLHPDVPISKDEEDNLIIRTFGKSDFRKPLSHVDLVVMVDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
D E G++VAGGRGYFLKGP V L+ ++ AL E+GYT LYTPFFMRKE M+ VAQ
Sbjct: 181 FDGERGSMVAGGRGYFLKGPLVFLEQAIINLALRMLDERGYTTLYTPFFMRKEAMRAVAQ 240
Query: 185 LAQFDEELYKVIGKGEKVG----DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 240
L+QFDEELYKV G+ E DS ++E ++KYLIATSEQPI A H++ WLP LP
Sbjct: 241 LSQFDEELYKVTGRRELNATANHDSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQLP 300
Query: 241 IRYLGVSTCFRQE-------------------------------------DLTKS----- 258
I+Y G+STCFRQE D S
Sbjct: 301 IKYAGISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAF 360
Query: 259 -----IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG 313
+ YR+V+IVSG LN+AAA K DLE WFPGSGAFRELVSCSNCLDYQSRRL +R+G
Sbjct: 361 YQALKLPYRIVSIVSGELNNAAAMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFG 420
Query: 314 QTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVP 363
QTKKMN+ +E+VHMLNAT CATTRVICAILE +QTE G+ +PD LR +P
Sbjct: 421 QTKKMNKSVEYVHMLNATMCATTRVICAILENYQTERGITVPDVLRSLMP 470
>gi|326935581|ref|XP_003213848.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like, partial
[Meleagris gallopavo]
Length = 467
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/367 (59%), Positives = 256/367 (69%), Gaps = 57/367 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD RKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 89 GNLLHPSVPISNDEDADNKVERIWGDCSCRKKYSHVDLVVMVDGYEGEKGAVVAGSRGYF 148
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG- 199
LKGP V L+ L+QYAL KGYTP+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 149 LKGPLVFLEQALIQYALQSLRAKGYTPVYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 208
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------- 252
EK DS+ +D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQ
Sbjct: 209 EKAEDSS-----IDEKYLIATSEQPIAALHRDEWLKPEDLPIKYAGLSTCFRQEVGSHGR 263
Query: 253 --------------------------------------EDLTKS--IAYRVVNIVSGALN 272
E+ +S I Y +VNIVSGALN
Sbjct: 264 DTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGALN 323
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
HAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +R+GQTKKM +K+EFVHMLNAT
Sbjct: 324 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRFGQTKKMMDKVEFVHMLNATM 383
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
CATTR ICAILE +QTE G+ +P+ LR F+P + I FVK API++E +KKQKKQ
Sbjct: 384 CATTRTICAILENYQTEEGIVVPERLRDFMPP---DLRQIIRFVKPAPIEQELSKKQKKQ 440
Query: 393 KEGMKKK 399
+EG +KK
Sbjct: 441 QEGGRKK 447
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 49 KADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP 81
+ADN NK KNLCSK IG+KMK KEPVG ++P
Sbjct: 2 RADNLNKLKNLCSKTIGDKMKKKEPVGSDESVP 34
>gi|350583566|ref|XP_001925705.3| PREDICTED: seryl-tRNA synthetase, cytoplasmic [Sus scrofa]
Length = 514
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/366 (59%), Positives = 255/366 (69%), Gaps = 55/366 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 136 GNLLHPSVPISNDEDADNKVERIWGDCSVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYF 195
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 196 LKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 255
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
+ D + ++KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQ
Sbjct: 256 EKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRD 311
Query: 253 -------------------------------------EDLTKS--IAYRVVNIVSGALNH 273
E+ +S I Y +VNIVSG+LNH
Sbjct: 312 TRGIFRVHQFEKIEQFVYSSPHDNKSWKMLREMIETAEEFYQSLGIPYHIVNIVSGSLNH 371
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K+EFVHMLNAT C
Sbjct: 372 AASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMC 431
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
ATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 432 ATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQH 488
Query: 394 EGMKKK 399
EG KKK
Sbjct: 489 EGSKKK 494
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 67/86 (77%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R++Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLH 86
S+ IGEKMK KE VG+ +LP + L+
Sbjct: 61 SRTIGEKMKKKEAVGNDESLPEDVLN 86
>gi|410947985|ref|XP_003980722.1| PREDICTED: serine--tRNA ligase, cytoplasmic-like [Felis catus]
Length = 513
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/366 (59%), Positives = 254/366 (69%), Gaps = 55/366 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 135 GNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYF 194
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 195 LKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 254
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
+ D + D+KYLIATSEQPI A+HRD WL LPI+Y +STCFRQ
Sbjct: 255 EKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYASLSTCFRQEVGSHGRD 310
Query: 253 -------------------------------------EDLTKS--IAYRVVNIVSGALNH 273
ED +S I Y +VNIVSG+LNH
Sbjct: 311 TRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEDFYQSLGIPYHIVNIVSGSLNH 370
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K+EFVHMLNAT C
Sbjct: 371 AASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMIDKVEFVHMLNATMC 430
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
ATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 ATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQH 487
Query: 394 EGMKKK 399
EG KKK
Sbjct: 488 EGSKKK 493
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 62/78 (79%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADGEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSS 78
SK IGEKMK KEPVGD S
Sbjct: 61 SKTIGEKMKKKEPVGDES 78
>gi|149708708|ref|XP_001494147.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like isoform 1 [Equus
caballus]
Length = 513
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/502 (48%), Positives = 296/502 (58%), Gaps = 112/502 (22%)
Query: 1 MVLDLDLFRTEKGG--------------DPEKV---------------RKNQKDRFKNVE 31
MVLDLDLFR +KGG DP V R + ++ KN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADGEWRRCRFRADNLNKLKN-- 58
Query: 32 LVDKVIENDLKWRQ----------------------FRHKADNFNKFKNLCSKVI----G 65
L K I +K ++ K K + L + I
Sbjct: 59 LCSKTIGEKMKKKEPVGDESVPENVLNLDDLTADALANLKVSQIKKVRLLIDEAILKCDA 118
Query: 66 EKMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDG 124
E++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 119 ERIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDG 178
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+ E GA+VAG RGYFLKG V L+ L+ YAL +GYTP+YTPFFMRKEVMQEVAQ
Sbjct: 179 FEGEKGAVVAGSRGYFLKGVLVFLEQALIHYALRTLRNRGYTPIYTPFFMRKEVMQEVAQ 238
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y
Sbjct: 239 LSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYA 294
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+STCFRQ E+ +S
Sbjct: 295 GLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSL 354
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKK
Sbjct: 355 GIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 414
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
M +K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 415 MMDKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQEL--IPFVK 471
Query: 378 TAPIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 472 PAPIDQEPSKKQKKQHEGSKKK 493
>gi|119576769|gb|EAW56365.1| seryl-tRNA synthetase, isoform CRA_a [Homo sapiens]
Length = 466
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/461 (50%), Positives = 291/461 (63%), Gaps = 77/461 (16%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLIT 120
SK IGEKMK KEPVGD ++P N L S ++ + ++++K +D
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVL------SFDDLTADALANLKVSQIKKVRLLID--E 112
Query: 121 MIDGVDSEAGAIVAGGR------GYFL---------KGPAVCLQVGLVQYALSKWIEKGY 165
I D+E + A G L +G V L+ L+QYAL +GY
Sbjct: 113 AILKCDAERIKLEAERFENLREIGNLLHPSVPISNDEGVLVFLEQALIQYALRTLGSRGY 172
Query: 166 TPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPI 225
P+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG + D + D+KYLIATSEQPI
Sbjct: 173 IPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPI 228
Query: 226 CAVHRDSWLPEASLPIRYLGVSTCFRQE-------------------------------- 253
A+HRD WL LPI+Y G+STCFRQE
Sbjct: 229 AALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNK 288
Query: 254 -------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
+ +S I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCS
Sbjct: 289 SWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCS 348
Query: 299 NCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCL 358
NC DYQ+RRL +RYGQTKKM +K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L
Sbjct: 349 NCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKL 408
Query: 359 RKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
++F+P + E IPFVK API++E +KKQKKQ EG KKK
Sbjct: 409 KEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQHEGSKKK 446
>gi|335775018|gb|AEH58431.1| seryl-tRNA synthetase, cytoplasmic-like protein, partial [Equus
caballus]
Length = 410
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/366 (59%), Positives = 254/366 (69%), Gaps = 55/366 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 32 GNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYF 91
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L+ L+ YAL +GYTP+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 92 LKGVLVFLEQALIHYALRTLRNRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 151
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
+ D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQ
Sbjct: 152 EKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRD 207
Query: 253 -------------------------------------EDLTKS--IAYRVVNIVSGALNH 273
E+ +S I Y +VNIVSG+LNH
Sbjct: 208 TRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLNH 267
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K+EFVHMLNAT C
Sbjct: 268 AASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMC 327
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
ATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 328 ATTRTICAILENYQTEKGIIVPEKLKEFMPPG-LQEL--IPFVKPAPIDQEPSKKQKKQH 384
Query: 394 EGMKKK 399
EG KKK
Sbjct: 385 EGSKKK 390
>gi|119576771|gb|EAW56367.1| seryl-tRNA synthetase, isoform CRA_c [Homo sapiens]
Length = 447
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/366 (58%), Positives = 254/366 (69%), Gaps = 55/366 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 69 GNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYF 128
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 129 LKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 188
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
+ D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQ
Sbjct: 189 EKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRD 244
Query: 253 -------------------------------------EDLTKS--IAYRVVNIVSGALNH 273
E+ +S I Y +VNIVSG+LNH
Sbjct: 245 TRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNH 304
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K+EFVHMLNAT C
Sbjct: 305 AASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMC 364
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
ATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 365 ATTRTICAILENYQTEKGITVPEKLKEFMPPG-LQEL--IPFVKPAPIEQEPSKKQKKQH 421
Query: 394 EGMKKK 399
EG KKK
Sbjct: 422 EGSKKK 427
>gi|119576775|gb|EAW56371.1| seryl-tRNA synthetase, isoform CRA_g [Homo sapiens]
Length = 521
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/366 (58%), Positives = 254/366 (69%), Gaps = 55/366 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 143 GNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYF 202
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 203 LKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 262
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
+ D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQ
Sbjct: 263 EKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRD 318
Query: 253 -------------------------------------EDLTKS--IAYRVVNIVSGALNH 273
E+ +S I Y +VNIVSG+LNH
Sbjct: 319 TRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNH 378
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K+EFVHMLNAT C
Sbjct: 379 AASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMC 438
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
ATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 439 ATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQH 495
Query: 394 EGMKKK 399
EG KKK
Sbjct: 496 EGSKKK 501
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%), Gaps = 7/92 (7%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF-------RHKADNF 53
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+F R +ADN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRFLDSLFLGRFRADNL 60
Query: 54 NKFKNLCSKVIGEKMKAKEPVGDSSTLPGNHL 85
NK KNLCSK IGEKMK KEPVGD ++P N L
Sbjct: 61 NKLKNLCSKTIGEKMKKKEPVGDDESVPENVL 92
>gi|395535505|ref|XP_003769766.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Sarcophilus harrisii]
Length = 514
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/366 (58%), Positives = 251/366 (68%), Gaps = 55/366 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 136 GNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYF 195
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L+ L+Q AL +GYTP+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 196 LKGVLVFLEQALIQLALRTLASRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 255
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK--- 257
+ D + D+KYLIATSEQPI A+HRD WL LPI+Y G STCFRQE +
Sbjct: 256 EKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTCFRQEVGSHGRD 311
Query: 258 --------------------------------------------SIAYRVVNIVSGALNH 273
I Y +VNIVSG+LNH
Sbjct: 312 TRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMISTAEEFYQALGIPYHIVNIVSGSLNH 371
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K+EFVHMLNAT C
Sbjct: 372 AASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMC 431
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
ATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 432 ATTRTICAILENYQTENGIIVPEKLKEFMPP-GLQEL--IPFVKPAPIDQELSKKQKKQH 488
Query: 394 EGMKKK 399
EG KKK
Sbjct: 489 EGGKKK 494
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 67/86 (77%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP VR+ Q+ RFK+ LVD+++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALVRETQEKRFKDPGLVDQLVRADSEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLH 86
S+ IGEKMK KEPVGD+ +LP N L+
Sbjct: 61 SRTIGEKMKKKEPVGDNESLPENVLN 86
>gi|402592898|gb|EJW86825.1| seryl-tRNA synthetase [Wuchereria bancrofti]
Length = 482
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 289/487 (59%), Gaps = 113/487 (23%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFN------ 54
MVLD+DLFR EKGG+PE VR +Q+ R+K+V+LVD VI+ D +WR+ R DNFN
Sbjct: 1 MVLDIDLFREEKGGNPELVRDSQRKRYKDVKLVDDVIDYDQRWRRDRFSTDNFNRLINLC 60
Query: 55 ------------------------KFKNLCSKVIG------------------------- 65
+ + LC+ I
Sbjct: 61 SKVIGEKKKEPVDDDNTVPIDYMERLETLCADDIKNLKISQIKKLKSTIDEKLVEKRREM 120
Query: 66 EKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
EK++AK GN +HP+VPVS+NED N + +T GD + +KKYSH+DL MIDG
Sbjct: 121 EKLEAKR--HQRLIQIGNIIHPTVPVSDNEDSNRVEKTFGDIKTKKKYSHIDLCVMIDGF 178
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D + G VAGGRGYFLKGP V L+ ++ +AL KG+ LYTPFFMRKEVMQEVAQL
Sbjct: 179 DGDRGTSVAGGRGYFLKGPLVFLEQAVINFALQMLHCKGFIALYTPFFMRKEVMQEVAQL 238
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFD+ELYKV GKG E +GD D+KYLIATSEQPI A HR+ W+ EA LPI+Y
Sbjct: 239 SQFDQELYKVTGKGSEVIGDETN-----DEKYLIATSEQPIAAYHRNEWISEADLPIKYA 293
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+S+CFRQ ED K+
Sbjct: 294 GISSCFRQEVGSHGRDTRGMFRVHQFEKIEQFVICSPYDDESWRMLDEMVENAEDFCKAL 353
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I +R+V IVSG LN+AAAKKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYG+TKK
Sbjct: 354 GIPFRIVCIVSGELNNAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKK 413
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
++ ++ +VHMLN T CATTRV+CA+LE +Q E G+R+P+ L +F+P Y IPF++
Sbjct: 414 LDGEVSYVHMLNGTMCATTRVLCALLENYQEENGIRVPEILTQFMPHPY---KELIPFIR 470
Query: 378 TAPIDEE 384
API+ +
Sbjct: 471 EAPIEND 477
>gi|307180360|gb|EFN68386.1| Seryl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
Length = 493
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/364 (60%), Positives = 250/364 (68%), Gaps = 54/364 (14%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GNHLH SVPVSN+E+EN + RT GD RK YSHVDLI MI G+D E G V+GGRGYFL
Sbjct: 137 GNHLHESVPVSNDEEENKVERTWGDCTERKTYSHVDLIHMIAGMDGERGTGVSGGRGYFL 196
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
GPAV LQ L+Q AL K ++ Y PLY PF MRK+ MQEVAQL+QFDEELYKVIGKG +
Sbjct: 197 TGPAVFLQQALIQLALRKLFKRDYVPLYAPFIMRKDAMQEVAQLSQFDEELYKVIGKGSE 256
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------- 254
E E+++KYLIATSEQPI A HR W+ E LPI+Y G+STCFRQE
Sbjct: 257 RN----EDKEMEEKYLIATSEQPIAAFHRGEWIAENVLPIKYAGISTCFRQEVGSHGRDT 312
Query: 255 ----------------LTK------------------------SIAYRVVNIVSGALNHA 274
LT I YR+VNIVSGALNHA
Sbjct: 313 RGIFRVHQFEKVEQFCLTSPYNNKSWEMMEEMISNAEEFYQALEIPYRIVNIVSGALNHA 372
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
A+KKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTKKMN ++VHMLNAT CA
Sbjct: 373 ASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNATTDYVHMLNATMCA 432
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKE 394
TRVICAILE HQTETG+R+P L +++P+ Y EIPFVK APIDE ETKKQKKQKE
Sbjct: 433 VTRVICAILEVHQTETGIRVPKILAEYMPSKY---ESEIPFVKPAPIDEIETKKQKKQKE 489
Query: 395 GMKK 398
+ K
Sbjct: 490 NVSK 493
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 67/81 (82%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KG DPEK+R+NQ+ RFK+V+LVD VIE D +WRQ RH ADNFNK KNLC
Sbjct: 1 MVLDLDLFRKDKGFDPEKIRENQRKRFKDVQLVDTVIEKDKRWRQLRHCADNFNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK IGEKMK KEP+GD +P
Sbjct: 61 SKEIGEKMKKKEPLGDVDDVP 81
>gi|340714550|ref|XP_003395790.1| PREDICTED: LOW QUALITY PROTEIN: seryl-tRNA synthetase,
cytoplasmic-like [Bombus terrestris]
Length = 429
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/351 (60%), Positives = 244/351 (69%), Gaps = 54/351 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN LH SVP+SN+E+EN + RT GD +KKYSHVDLI MIDG+D E G V+GGRGYFL
Sbjct: 70 GNILHESVPISNDEEENKVERTCGDCTQKKKYSHVDLIYMIDGIDGERGTNVSGGRGYFL 129
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
GPAV LQ L+Q AL + KGY PLYTPFFMRK+VMQEVAQL+QFDEELYKVIGKG +
Sbjct: 130 TGPAVFLQHALIQLALRQLHVKGYKPLYTPFFMRKDVMQEVAQLSQFDEELYKVIGKGSE 189
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ--------- 252
D E+++KYLIATSEQPI A HR+ W+PE LPI+Y G+STCFRQ
Sbjct: 190 RNDDK----EIEEKYLIATSEQPIAAFHRNEWIPENILPIKYAGLSTCFRQEVGSHGRDT 245
Query: 253 ------------------------------------EDLTKS--IAYRVVNIVSGALNHA 274
E+ KS I YR+VNIVSGALN+A
Sbjct: 246 RGIFRVHQFEKVEQFCLTSPYDDKSWQMMEEMISNAEEFYKSLEIPYRIVNIVSGALNNA 305
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
A+KKLDLEAWFPGS AFRELVSCSNCLDYQ+RRLLVRYGQTKKMN ++VHMLNAT CA
Sbjct: 306 ASKKLDLEAWFPGSSAFRELVSCSNCLDYQARRLLVRYGQTKKMNANTDYVHMLNATMCA 365
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 385
TRVICAILE HQT+T V++P L +F+PA Y EIPFVK APIDE E
Sbjct: 366 VTRVICAILEVHQTDTSVKVPKVLAQFMPAEY---EYEIPFVKPAPIDETE 413
>gi|350411130|ref|XP_003489249.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Bombus
impatiens]
Length = 496
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/351 (60%), Positives = 243/351 (69%), Gaps = 54/351 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN LH SVP+SN+E+EN + RT GD +KKYSHVDLI MIDG+D E G V+GGRGYFL
Sbjct: 137 GNILHESVPISNDEEENKVERTCGDCTQKKKYSHVDLIYMIDGIDGERGTNVSGGRGYFL 196
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
GPAV LQ L+Q AL + KGY PLYTPFFMRK+VMQEVAQL+QFDEELYKVIGKG +
Sbjct: 197 TGPAVFLQHALIQLALRQLHVKGYKPLYTPFFMRKDVMQEVAQLSQFDEELYKVIGKGSE 256
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ--------- 252
D E+++KYLIATSEQPI A HR+ W+PE LPI+Y G+STCFRQ
Sbjct: 257 RNDDK----EIEEKYLIATSEQPIAAFHRNEWIPENILPIKYAGLSTCFRQEVGSHGRDT 312
Query: 253 ------------------------------------EDLTKS--IAYRVVNIVSGALNHA 274
E+ KS I YR+VNIVSGALN+A
Sbjct: 313 RGIFRVHQFEKVEQFCLTSPYDDKSWQMMEEMISNAEEFYKSLEIPYRIVNIVSGALNNA 372
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
A+KKLDLEAWFPGS AFRELVSCSNCLDYQ+RRLLVRYGQTKKMN ++VHMLNAT CA
Sbjct: 373 ASKKLDLEAWFPGSSAFRELVSCSNCLDYQARRLLVRYGQTKKMNANTDYVHMLNATMCA 432
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 385
TRVICAILE HQT+T V++P L +F+P Y EIPFVK APIDE E
Sbjct: 433 VTRVICAILEVHQTDTSVKVPKVLAQFMPTEY---EYEIPFVKPAPIDETE 480
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 63/80 (78%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDL+LFR +KG DP+KVR+NQ+ RFK+V LVD VIE D WRQ RH+ADN NK KN+C
Sbjct: 1 MVLDLELFRKDKGFDPDKVRENQRKRFKDVNLVDTVIEKDKIWRQLRHRADNLNKLKNVC 60
Query: 61 SKVIGEKMKAKEPVGDSSTL 80
SK IGEKMK KE VG T+
Sbjct: 61 SKEIGEKMKKKEAVGGDDTV 80
>gi|224085041|ref|XP_002196082.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Taeniopygia guttata]
Length = 492
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/360 (59%), Positives = 251/360 (69%), Gaps = 57/360 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD RKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 97 GNLLHPSVPISNDEDVDNKVERVWGDCSCRKKYSHVDLVVMVDGYEGEKGAVVAGSRGYF 156
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG- 199
LKGP V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 157 LKGPLVFLEQALIQYALQSLRARGYTPVYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 216
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------- 252
E+ DS+ +D+KYLIATSEQPI A+HRD WL LP++Y G+STCFRQ
Sbjct: 217 ERAEDSS-----IDEKYLIATSEQPIAALHRDEWLRPEDLPLKYAGLSTCFRQEVGSHGR 271
Query: 253 --------------------------------------EDLTKS--IAYRVVNIVSGALN 272
E+ +S I Y +VNIVSG+LN
Sbjct: 272 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEIFEEMMATAEEFYQSLGIPYHIVNIVSGSLN 331
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
HAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 332 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 391
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
CATTR ICAILE HQT G+RIP+ L+ F+P + IPFVK API++E +KKQKKQ
Sbjct: 392 CATTRTICAILENHQTPEGIRIPEKLQNFMPP---DLRELIPFVKPAPIEQELSKKQKKQ 448
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 45 QFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP 81
Q R +ADN NK KNLCSK IG+KMK KEPVG ++P
Sbjct: 6 QCRFRADNLNKLKNLCSKTIGDKMKKKEPVGTDESVP 42
>gi|281341624|gb|EFB17208.1| hypothetical protein PANDA_007865 [Ailuropoda melanoleuca]
Length = 536
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 246/525 (46%), Positives = 297/525 (56%), Gaps = 135/525 (25%)
Query: 1 MVLDLDLFRTEKGG--------------DPEKV---------------RKNQKDRFKNVE 31
MVLDLDLFR +KGG DP V R + ++ KN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADGEWRRCRFRADNLNKLKN-- 58
Query: 32 LVDKVIENDLKWRQ----------------------FRHKADNFNKFKNLCSKVI----G 65
L K I +K ++ K K + L + I
Sbjct: 59 LCSKTIGEKMKKKEPVGDESIPEDVLNLDDLTADTLANLKVSQIKKVRLLIDEAILKCDA 118
Query: 66 EKMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDG 124
E++K + ++ GN LHPSVP+SN+ED +N + R GD +RKKYSHVDL+ M+DG
Sbjct: 119 ERIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTIRKKYSHVDLVVMVDG 178
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQ
Sbjct: 179 FEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQ 238
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y
Sbjct: 239 LSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYA 294
Query: 245 GVSTCFRQ---------------------------------------------EDLTKS- 258
G+STCFRQ ED +S
Sbjct: 295 GLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSL 354
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKK
Sbjct: 355 GIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 414
Query: 318 MNEKI-----------------------EFVHMLNATACATTRVICAILETHQTETGVRI 354
M +KI EFVHMLNAT CATTR ICAILE +QTE G+ +
Sbjct: 415 MMDKIKNNPHLSTEDTLKAVSSLSLGKVEFVHMLNATMCATTRTICAILENYQTEKGIVV 474
Query: 355 PDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
P+ L++F+P + E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 475 PEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 516
>gi|410967976|ref|XP_003990489.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Felis catus]
Length = 557
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/389 (56%), Positives = 255/389 (65%), Gaps = 78/389 (20%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 156 GNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYF 215
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 216 LKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 275
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
+ D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQ
Sbjct: 276 EKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRD 331
Query: 253 -------------------------------------EDLTKS--IAYRVVNIVSGALNH 273
ED +S I Y +VNIVSG+LNH
Sbjct: 332 TRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEDFYQSLGIPYHIVNIVSGSLNH 391
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKI----------- 322
AA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +KI
Sbjct: 392 AASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKIKDNHHLSIENK 451
Query: 323 ------------EFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEA 370
EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E
Sbjct: 452 LKAVSSLSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL 510
Query: 371 GEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 511 --IPFVKPAPIDQEPSKKQKKQHEGSKKK 537
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
VLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLCS
Sbjct: 23 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADGEWRRCRFRADNLNKLKNLCS 82
Query: 62 KVIGEKMKAKEPVGDSS 78
K IGEKMK KEPVGD S
Sbjct: 83 KTIGEKMKKKEPVGDES 99
>gi|308481089|ref|XP_003102750.1| CRE-SARS-2 protein [Caenorhabditis remanei]
gi|308260836|gb|EFP04789.1| CRE-SARS-2 protein [Caenorhabditis remanei]
Length = 487
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/494 (47%), Positives = 284/494 (57%), Gaps = 111/494 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQ---------------------KDRFKNVEL------- 32
MVLD+D+FR EKGG+PE +RK+Q KDRF EL
Sbjct: 1 MVLDIDMFRKEKGGNPEVIRKSQRDRYKDVTLVDQVIEFDEKWRKDRFIADELNRQKNAI 60
Query: 33 ---------------VDKVIENDLKWRQFRHKADNFNKFKNLCSK----VIGEK------ 67
D + +D+ R K D +K + K ++ EK
Sbjct: 61 SKAIGEKMKKKEPQGTDDAVADDIVARLTDLKLDELSKLTVVQLKKLRVLVDEKSAETAA 120
Query: 68 -MKAKEPVGDSSTLP-GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
+ A E + GN LH SV VS+NED N + RT GD RKKYSHVDL+ M+DG
Sbjct: 121 AVVAHETARHEKLIQIGNLLHESVVVSDNEDNNKVERTFGDLTTRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G +VAG RGYFLKGP V L+ ++Q AL + KGYTPLYTPFFMRKEVMQEVAQL
Sbjct: 181 DGERGTVVAGARGYFLKGPLVFLEQAIIQLALQRLNVKGYTPLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFD+ELYKV KG +V GD++ +D+KYLIATSEQPI A HR+ W+ E LPI+Y
Sbjct: 241 SQFDDELYKVSSKGSEVAGDTS-----IDEKYLIATSEQPIAAYHRNEWIKETELPIKYA 295
Query: 245 GVSTCFRQEDLTK----------------------------------------------- 257
GVSTCFRQE +
Sbjct: 296 GVSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWKLFDEMIGNAESYYQEL 355
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y VVNIVSG LN+AAAKK DLEAWFPGSGA RELVSCSNCLDYQSRRL VRYGQTKK
Sbjct: 356 QIPYHVVNIVSGELNNAAAKKFDLEAWFPGSGAMRELVSCSNCLDYQSRRLKVRYGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
+N ++ FVHMLNAT CATTRVICAILE +QTE G+ +P +++++P Y IPFVK
Sbjct: 416 LNGEVPFVHMLNATMCATTRVICAILENNQTEEGINVPTAIQQWMPENY---RTFIPFVK 472
Query: 378 TAPIDEEETKKQKK 391
APID + K K
Sbjct: 473 PAPIDVDAKKAAAK 486
>gi|348523285|ref|XP_003449154.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Oreochromis
niloticus]
Length = 517
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/356 (59%), Positives = 242/356 (67%), Gaps = 57/356 (16%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + RT GD +KKYSHVDL+ MIDG D E GAIVAG RGYF
Sbjct: 136 GNLLHPSVPISNDEDADNKVERTWGDCTAQKKYSHVDLVVMIDGFDGERGAIVAGSRGYF 195
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG- 199
LKGP V L+ L+ YAL K YT LYTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 196 LKGPLVFLEQALINYALRILYSKNYTMLYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 255
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------- 252
EK DS+ +D+KYLIATSEQPI A R+ WL LPIRY G STCFRQ
Sbjct: 256 EKSDDSS-----IDEKYLIATSEQPIAAFLREEWLKPEDLPIRYAGFSTCFRQEVGSHGR 310
Query: 253 --------------------------------------EDLTKS--IAYRVVNIVSGALN 272
E+ +S I YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDGKSWEMLDEMIGTAEEFYQSLGIPYRIVNIVSGALN 370
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
HAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKAEFVHMLNATM 430
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 388
CATTRV+CAILE +QTE G+ +P+ LR+F+P I FVK APID+E +KK
Sbjct: 431 CATTRVMCAILENYQTEEGIIVPETLREFMPPGLTE---IIKFVKPAPIDQEMSKK 483
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 64/81 (79%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDPE VR+ Q+ RFK+V LVDK++ D +WR+ R ADN NK KNLC
Sbjct: 1 MVLDLDLFRTDKGGDPEVVRETQRKRFKDVTLVDKLVAADTEWRKCRFTADNLNKAKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK IGEKMK KEPVG+ +P
Sbjct: 61 SKSIGEKMKKKEPVGEDEAVP 81
>gi|291236905|ref|XP_002738381.1| PREDICTED: seryl-tRNA synthetase-like [Saccoglossus kowalevskii]
Length = 518
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/349 (59%), Positives = 240/349 (68%), Gaps = 56/349 (16%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN LH SVP+SN+EDEN IVRT G+ +VRKKYSHVDLI MIDG++ E GA+V+G RGYFL
Sbjct: 138 GNMLHESVPISNDEDENEIVRTFGELDVRKKYSHVDLIHMIDGMEGERGAVVSGSRGYFL 197
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG-E 200
KG + L+ L+Q+ L EK + PLYTPFFM+KEVMQEVAQL+QFD+ELYKVIGKG E
Sbjct: 198 KGAVIFLEQALIQHGLRILAEKDFIPLYTPFFMKKEVMQEVAQLSQFDDELYKVIGKGSE 257
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
K DS E +KYLIATSEQPI A HRD W+P A LPI+Y G STCFRQ
Sbjct: 258 KSEDSGYE-----EKYLIATSEQPIAAYHRDEWIPTADLPIKYAGYSTCFRQEVGSHGRD 312
Query: 253 -------------------------------------EDLTKS--IAYRVVNIVSGALNH 273
E+ KS I YR+VNIVSG LN+
Sbjct: 313 TRGIFRVHQFEKVEQFCLTSPHENKSWEMFDEMIGNAENFYKSLGIPYRIVNIVSGELNN 372
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRY QTKKM ++ FVHMLNAT C
Sbjct: 373 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYSQTKKMGGQVSFVHMLNATMC 432
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
ATTRVIC ILE +QTE G+ IPD L++++P N I FVK APID
Sbjct: 433 ATTRVICVILENYQTEEGIIIPDVLKQYMPP---NLQDIIKFVKPAPID 478
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 66/77 (85%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDL+LFR++KGGDP K+++NQ R+K+V LVD+V+E D WR+ R++ADNFNK KN C
Sbjct: 1 MVLDLELFRSDKGGDPAKIKENQAKRYKDVTLVDRVVEADTAWRKCRYQADNFNKLKNDC 60
Query: 61 SKVIGEKMKAKEPVGDS 77
SK+IGEKMK KEPVGD+
Sbjct: 61 SKMIGEKMKKKEPVGDA 77
>gi|432864517|ref|XP_004070332.1| PREDICTED: serine--tRNA ligase, cytoplasmic-like [Oryzias latipes]
Length = 516
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/355 (59%), Positives = 236/355 (66%), Gaps = 55/355 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + RT GD +KKYSHVDL+ MIDG D E GA+VAG RGYF
Sbjct: 136 GNLLHPSVPISNDEDADNKVERTWGDCSAQKKYSHVDLVVMIDGYDGERGAVVAGSRGYF 195
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKGP V L+ L+ YAL K YT LYTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 196 LKGPLVFLEQALINYALRILHSKKYTMLYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 255
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------- 253
+ D + LD+KYLIATSEQPI A R+ WL LPIRY G STCFRQE
Sbjct: 256 ERSDDS----SLDEKYLIATSEQPIAAFLREEWLKPEDLPIRYAGFSTCFRQEVGSHGRD 311
Query: 254 ----------------------------------------DLTKSIAYRVVNIVSGALNH 273
T I YR+VNIVSGALNH
Sbjct: 312 TRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMIGTAEEFYQTLGIPYRIVNIVSGALNH 371
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K EFVHMLNAT C
Sbjct: 372 AASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKTEFVHMLNATMC 431
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 388
ATTRV+CAILE +QTE G+ +P+ LR F+P I FVK APID+E KK
Sbjct: 432 ATTRVMCAILENYQTEEGIVVPEKLRDFMPPGLTE---IIKFVKPAPIDQETAKK 483
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 65/81 (80%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDPE VR+ Q+ RFK+V LVDK++ D +WR+ R ADN NK KNLC
Sbjct: 1 MVLDLDLFRTDKGGDPELVRETQRKRFKDVTLVDKLVAVDTEWRKCRFTADNLNKAKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK IGEKMK KEPVGD ++P
Sbjct: 61 SKSIGEKMKRKEPVGDDESVP 81
>gi|198432935|ref|XP_002127248.1| PREDICTED: similar to Seryl-aminoacyl-tRNA synthetase [Ciona
intestinalis]
Length = 506
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/354 (58%), Positives = 238/354 (67%), Gaps = 59/354 (16%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GNHLH SVPVSN+ED +N I RT GD RKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 136 GNHLHSSVPVSNDEDADNRIERTIGDCTTRKKYSHVDLVVMVDGYEGERGAVVAGSRGYF 195
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK-G 199
LKGP V L+ L+ +AL + GY PLYTP+FMRKEVMQEVAQL+QFD+ELYKV+GK
Sbjct: 196 LKGPLVFLEQALINFALQRLANNGYVPLYTPYFMRKEVMQEVAQLSQFDDELYKVVGKSS 255
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
EK D D+KYLIATSEQPI A+HRD WL LPI+Y G STCFRQE
Sbjct: 256 EKAEDGGT-----DEKYLIATSEQPIAALHRDEWLEPEKLPIKYAGFSTCFRQEVGSHGR 310
Query: 254 -----------------------------------------DLTKSIAYRVVNIVSGALN 272
DL I Y +V IVSGALN
Sbjct: 311 DTRGIFRVHQFEKVEQFVYSSPETSWQHFDEMIATAEGFYKDL--GIPYHIVCIVSGALN 368
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
HAAAKKLDLEAWFPGSGA RELVSCSNCLDYQ+RRL VR+GQTKKM EK+++VHMLNAT
Sbjct: 369 HAAAKKLDLEAWFPGSGAHRELVSCSNCLDYQARRLKVRFGQTKKMMEKVDYVHMLNATM 428
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 386
CATTRVICAILE +QTE G+ IP+ L+ F+P Y + I FV+ APIDEEE
Sbjct: 429 CATTRVICAILENYQTEEGIVIPEVLKSFMPQQYRD---MIKFVRPAPIDEEEA 479
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 65/81 (80%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGG+PEK+R+NQ R+K+V+LVD ++E D +WR+ R+ DNFNK KN C
Sbjct: 1 MVLDLDLFRKDKGGNPEKIRENQSKRYKDVKLVDNLVEADTEWRKCRYSLDNFNKQKNQC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK IG KMK KEP+G+ TLP
Sbjct: 61 SKAIGLKMKKKEPIGEDDTLP 81
>gi|324508480|gb|ADY43578.1| Seryl-tRNA synthetase [Ascaris suum]
Length = 485
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/491 (46%), Positives = 283/491 (57%), Gaps = 113/491 (23%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQ---------------------KDRF--------KNVE 31
MVLD+DLFR EKGG+PE +R++Q KDRF KNV
Sbjct: 1 MVLDMDLFREEKGGNPELIRESQRKRYKDVTLVDRVIDCDQKWRKDRFAVDNLNRLKNV- 59
Query: 32 LVDKVIENDLKWRQFRHKADN-----FNKFKNLCSK---------------VIGEKM--- 68
K + +K ++ + DN N L + +I E+M
Sbjct: 60 -CSKAVGEKMKKKEPQGDEDNIPDGLLNGLDKLNAAALNDLSIAQIKRLRVIIDERMTET 118
Query: 69 -----KAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMID 123
K + ++ GN LH SVPVS++ED N + RT G+ KKYSHVDLI M+D
Sbjct: 119 KREMEKLELARNEALVQIGNILHDSVPVSDDEDNNRVERTFGNINAAKKYSHVDLIVMVD 178
Query: 124 GVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA 183
G D E G +VAGGRGYFLKG V L+ ++ AL + KG+T LYTPFFMRKEVMQEVA
Sbjct: 179 GFDGERGTVVAGGRGYFLKGAMVFLEQAVINLALQTLLSKGFTALYTPFFMRKEVMQEVA 238
Query: 184 QLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRY 243
QL+QFDEELYKV GKG +V + +D+KYLIATSEQPI A HR+ WL + LP++Y
Sbjct: 239 QLSQFDEELYKVTGKGSEV----VTDESIDEKYLIATSEQPIAAFHRNEWLNPSELPLKY 294
Query: 244 LGVSTCFRQEDLTKS--------------------------------------------- 258
G+STCFRQE +
Sbjct: 295 AGISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLCSPHDGISWKMFDEMIANAEEFCQM 354
Query: 259 --IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK 316
+ YR+V IVSG LN+AAAKKLDLEAWFPGS AFRELVSCSNC DYQ+RRL VR+GQTK
Sbjct: 355 LELPYRIVCIVSGELNNAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKVRFGQTK 414
Query: 317 KMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 376
KM+ ++ FVHMLNAT CATTRV+CAILE Q E G+R+P L+ F+PAVY A +IPF+
Sbjct: 415 KMDGEVPFVHMLNATMCATTRVLCAILENFQEEDGIRVPKALKPFMPAVY---AEKIPFI 471
Query: 377 KTAPIDEEETK 387
K APID + K
Sbjct: 472 KPAPIDTDMKK 482
>gi|341881920|gb|EGT37855.1| CBN-SARS-2 protein [Caenorhabditis brenneri]
Length = 487
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/495 (46%), Positives = 284/495 (57%), Gaps = 111/495 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQ---------------------KDRF------------ 27
MVLD+DLFR EKGG+P+ +RK+Q K+RF
Sbjct: 1 MVLDIDLFRVEKGGNPDIIRKSQRDRYKDEKLVDQVIEFDEKWRKERFLADLLNRQKNAI 60
Query: 28 ----------KNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDS 77
K + D + +D+ R K D +K + K + + K +
Sbjct: 61 SKAIGEKMKKKEAQGTDDTVSDDIIERLAELKLDELSKLTVVQLKKLRLLVDEKSVQTAA 120
Query: 78 STLP------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
+ + GN +H SV VS++E N + RT GD KKYSHVDL+ M+DG
Sbjct: 121 AVIAHENARHEKLVQIGNLIHESVVVSDDEKNNKVERTYGDLTTEKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G +VAGGRGYFLKGP V L+ ++Q AL + K YTPLYTPFFMRKEVMQEVAQL
Sbjct: 181 DGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQRLNLKDYTPLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFD+ELYKV KG E GD++ +D+KYLIATSEQPI A HR+ W+ E+ LPI+Y
Sbjct: 241 SQFDDELYKVSSKGSENPGDTS-----VDEKYLIATSEQPIAAYHRNEWIKESDLPIKYA 295
Query: 245 GVSTCFRQE-----DLTKSI---------------------------------------- 259
GVSTCFRQE T+ I
Sbjct: 296 GVSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQEL 355
Query: 260 --AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
Y+VVNIVSG LN+AA+KK DLEAWFPGS A+RELVSCSNCLDYQSRRL VRYGQTKK
Sbjct: 356 QIPYQVVNIVSGELNNAASKKFDLEAWFPGSKAYRELVSCSNCLDYQSRRLKVRYGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
+N ++ FVHMLNAT CATTRVICAILE +QTETG+ +P +++++P Y IPF K
Sbjct: 416 LNGEVPFVHMLNATMCATTRVICAILENNQTETGINVPTAIQQWMPEKY---RTFIPFTK 472
Query: 378 TAPIDEEETKKQKKQ 392
APIDE+ K K+
Sbjct: 473 PAPIDEDAKKAAGKK 487
>gi|340369155|ref|XP_003383114.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Amphimedon
queenslandica]
Length = 499
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/500 (45%), Positives = 287/500 (57%), Gaps = 109/500 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLK----------WRQFRH-- 48
M LDL LFR ++GG+P+ +R QK RFK+V VDKV+E D + W + ++
Sbjct: 1 MPLDLLLFRADQGGNPDLMRDMQKKRFKDVIHVDKVVEMDTQWRKLRFESDNWNKLKNHC 60
Query: 49 --------------------------KADNF--NKFKNLCSKVIGEKMKAKEPVGDSSTL 80
K D+ ++ K+L I + E D ++
Sbjct: 61 SKTIGEKMKKKEPIGESADVPESLVTKLDSITPDEIKSLTVTQIKRLQQLIEEASDKNST 120
Query: 81 P---------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
GN LHPSVP+S+NED N + RT GD +RKKYSH+DL+ M+DGV
Sbjct: 121 KRKELEETRSFHLAQIGNSLHPSVPISDNEDNNRVERTFGDASIRKKYSHMDLVVMVDGV 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D + G VAG R Y+LKGP V L+ L+Q+ALS EK + PLYTPFFM+KEVMQEVA L
Sbjct: 181 DMQRGTTVAGNRCYYLKGPLVFLEQALIQFALSTLSEKSFVPLYTPFFMKKEVMQEVAHL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+ ++E LYKVIGK ++ D + +++KYLIATSEQPI A HR WL +LP++Y G
Sbjct: 241 SDYEEMLYKVIGKSSEIVDDS----NVEEKYLIATSEQPIAAFHRGDWLDPQTLPLKYAG 296
Query: 246 VSTCFRQE------------------------------DLT-----------------KS 258
+S+CFRQE D++
Sbjct: 297 LSSCFRQEVDSHGRDTRGIFRVHQFQKVEQFCLTSPHDDVSWKMFDEMISNAEFFYQQLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YRVVNIVSG LN AAA K DLE FPGSGA+RELVSCSNCLDYQ RRL VR+G TKKM
Sbjct: 357 IPYRVVNIVSGELNLAAAMKYDLEGLFPGSGAYRELVSCSNCLDYQVRRLQVRFGLTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N + ++VHMLNAT CATTR ICAILE +QTE GV +P+ LR+++P Y I FV+
Sbjct: 417 NAQADYVHMLNATMCATTRTICAILENNQTEEGVVVPEILRQYMPPAY---KEFIKFVQA 473
Query: 379 APIDEEETKKQKKQKEGMKK 398
API E TKKQ+ Q GM+K
Sbjct: 474 APIHEPITKKQENQMAGMEK 493
>gi|341901369|gb|EGT57304.1| hypothetical protein CAEBREN_18983 [Caenorhabditis brenneri]
Length = 487
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/495 (46%), Positives = 284/495 (57%), Gaps = 111/495 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQ---------------------KDRF------------ 27
MVLD+DLFR EKGG+P+ +RK+Q K+RF
Sbjct: 1 MVLDIDLFRVEKGGNPDIIRKSQRDRYKDEKLVDQVIEFDEKWRKERFLADLLNRQKNAI 60
Query: 28 ----------KNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDS 77
K + D + +D+ R K D +K + K + + K +
Sbjct: 61 SKAIGEKMKKKEPQGTDDTVSDDIIERLAELKLDELSKLTVVQLKKLRLLVDEKSVQTAA 120
Query: 78 STLP------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
+ + GN +H SV VS++E N + RT GD KKYSHVDL+ M+DG
Sbjct: 121 AVIAHENARHEKLVQIGNLIHESVVVSDDEKNNKVERTYGDLTTEKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G +VAGGRGYFLKGP V L+ ++Q AL + K YTPLYTPFFMRKEVMQEVAQL
Sbjct: 181 DGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQRLNLKDYTPLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFD+ELYKV KG E GD++ +D+KYLIATSEQPI A HR+ W+ E+ LPI+Y
Sbjct: 241 SQFDDELYKVSSKGSENPGDTS-----VDEKYLIATSEQPIAAYHRNEWIKESDLPIKYA 295
Query: 245 GVSTCFRQE-----DLTKSI---------------------------------------- 259
GVSTCFRQE T+ I
Sbjct: 296 GVSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQEL 355
Query: 260 --AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
Y+VVNIVSG LN+AA+KK DLEAWFPGS A+RELVSCSNCLDYQSRRL VRYGQTKK
Sbjct: 356 QIPYQVVNIVSGELNNAASKKFDLEAWFPGSKAYRELVSCSNCLDYQSRRLKVRYGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
+N ++ FVHMLNAT CATTRVICAILE +QTETG+ +P +++++P Y IPF K
Sbjct: 416 LNGEVPFVHMLNATMCATTRVICAILENNQTETGINVPTAIQQWMPEKY---RTFIPFTK 472
Query: 378 TAPIDEEETKKQKKQ 392
APIDE+ K K+
Sbjct: 473 PAPIDEDAKKAAGKK 487
>gi|17539260|ref|NP_501804.1| Protein SARS-1 [Caenorhabditis elegans]
gi|2501055|sp|Q18678.1|SYSC_CAEEL RecName: Full=Probable serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|3875110|emb|CAA93105.1| Protein SARS-1 [Caenorhabditis elegans]
Length = 487
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/495 (46%), Positives = 284/495 (57%), Gaps = 111/495 (22%)
Query: 1 MVLDLDLFRTEKGGDP------------------------EKVRK-----NQKDRFKNV- 30
MVLD+D+FRTEKGG+P EK RK +Q +R KN
Sbjct: 1 MVLDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVADQLNRQKNAI 60
Query: 31 -------------ELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDS 77
+ D + +D+ R K D ++ + K + + K +
Sbjct: 61 SKAIGEKMKKKEPQGTDDSVADDIVARLAELKIDELSQLTVVQLKKLRVLVDEKSVQTAA 120
Query: 78 STLP------------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
+ + GN +H SV VS +E N I RT GD +KKYSHVDL+ M+DG
Sbjct: 121 AVIANENARHEKLIQIGNLIHSSVVVSKDEANNKIERTFGDLSTKKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G +VAGGRGYFLKGP V L+ ++Q AL + KGY PLYTPFFMRKEVMQEVAQL
Sbjct: 181 DGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQRLNVKGYVPLYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
+QFD+ELYKV KG ++ GD++ +D+KYLIATSEQPI A HR+ W+ E LPI+Y
Sbjct: 241 SQFDDELYKVSSKGSEIAGDTS-----VDEKYLIATSEQPIAAYHRNEWIKETELPIKYA 295
Query: 245 GVSTCFRQEDLTK----------------------------------------------- 257
GVSTCFRQE +
Sbjct: 296 GVSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQEL 355
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I Y+VVNIVSG LN+AAAKK DLEAWFPGSGA+RELVSCSNCLDYQSRRL VRYGQTKK
Sbjct: 356 QIPYQVVNIVSGELNNAAAKKFDLEAWFPGSGAYRELVSCSNCLDYQSRRLKVRYGQTKK 415
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
++ ++ FVHMLNAT CATTRVICAILE +QTE G+ +P +++++P Y IPFVK
Sbjct: 416 LSGEVPFVHMLNATMCATTRVICAILENNQTEEGINVPTAIQQWMPENY---RTFIPFVK 472
Query: 378 TAPIDEEETKKQKKQ 392
APIDE+ K K+
Sbjct: 473 PAPIDEDAKKATGKK 487
>gi|340369153|ref|XP_003383113.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Amphimedon
queenslandica]
Length = 499
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/364 (54%), Positives = 239/364 (65%), Gaps = 54/364 (14%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN LHPSVP+S+NED N GD +RKKYSH+DL+ M+DGVD + G VAG R Y+L
Sbjct: 137 GNSLHPSVPISDNEDNNRXXXXFGDASIRKKYSHMDLVVMVDGVDMQRGTTVAGNRCYYL 196
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
KGP V L+ L+Q+ALS EK + PLYTPFFM+KEVMQEVAQL+ FDE LYKVI K +
Sbjct: 197 KGPLVFLEQALIQFALSTLSEKSFVPLYTPFFMKKEVMQEVAQLSDFDEMLYKVISKSSE 256
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
+ D + +++KYLIATSEQPI A HR WL +LP+RY G+S+CFRQE
Sbjct: 257 IVDDS----NVEEKYLIATSEQPIAAFHRGDWLDPQTLPLRYAGLSSCFRQEVGSHGRDT 312
Query: 254 ----------------------DLT-----------------KSIAYRVVNIVSGALNHA 274
D++ I YRVVNIVSG LN A
Sbjct: 313 RGIFRVHQFQKVEQFCLTSPHDDVSWKMFDEMISNAEFFYQQLGIPYRVVNIVSGELNLA 372
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AA K DLE WFPGSGA+RELVSCSNCLDYQ+RRL VR+G TKKMN + ++VHMLNAT CA
Sbjct: 373 AAMKYDLEGWFPGSGAYRELVSCSNCLDYQARRLQVRFGLTKKMNAQADYVHMLNATMCA 432
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKE 394
TTR ICAILE +QTE GV +P+ LR+++P Y I FV+ APIDE TKKQKKQ
Sbjct: 433 TTRTICAILENNQTEEGVVVPEILRQYMPPAY---KEFIKFVQAAPIDEPMTKKQKKQMA 489
Query: 395 GMKK 398
GMKK
Sbjct: 490 GMKK 493
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 64/81 (79%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LDL LFR ++GG+P+ +R QK RFK+V VDKV+E D +WR+ R ++DN+NK KNLC
Sbjct: 1 MSLDLLLFRADQGGNPDLMRDIQKKRFKDVVHVDKVVEMDTQWRKLRFESDNWNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK IGEKMK KEP+G+S+ +P
Sbjct: 61 SKTIGEKMKKKEPIGESADIP 81
>gi|449677187|ref|XP_002157171.2| PREDICTED: serine--tRNA ligase, cytoplasmic-like [Hydra
magnipapillata]
Length = 450
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/359 (55%), Positives = 236/359 (65%), Gaps = 56/359 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN LH SV VSN+E+EN IVR GD +KK+SHVDL+ MIDGVD E GA VAG RGYFL
Sbjct: 84 GNWLHDSVVVSNDEEENEIVRVVGDCTTKKKFSHVDLLAMIDGVDYERGANVAGNRGYFL 143
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
KGP V LQ L+ AL + GYTP+YTPFFMRKEVMQEVAQL+QFDEELYKV+GKG +
Sbjct: 144 KGPGVLLQQALINLALQTLVGSGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVVGKGSE 203
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
D +++KYLIATSEQPI A HR W+ + LP +Y G+S+CFRQE
Sbjct: 204 RDDDTA----VEEKYLIATSEQPIAAFHRGEWMSTSDLPKKYAGISSCFRQEVGCHGRDT 259
Query: 254 ------------------------------DLTKS---------IAYRVVNIVSGALNHA 274
++ + I YR+V IVSGALN+A
Sbjct: 260 RGIFRVHQFEKVEQFVICSPHDNESWKHLDEMVNNAEKFYQALNIPYRIVGIVSGALNNA 319
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKKLDLEAWFPGSGAFREL SCSNC DYQ+RRLLVRYGQTKKMN+K EF HMLNAT CA
Sbjct: 320 AAKKLDLEAWFPGSGAFRELCSCSNCTDYQARRLLVRYGQTKKMNDKTEFCHMLNATMCA 379
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
+TRVIC ILE +QTE G+ +P+ LR F+ V I +VKTAPI+ + K K K
Sbjct: 380 STRVICCILENNQTEEGIIVPELLRPFMGNVEF-----IKYVKTAPIEGNKDVKGKSNK 433
>gi|339235125|ref|XP_003379117.1| seryl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
gi|316978241|gb|EFV61250.1| seryl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
Length = 494
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/357 (56%), Positives = 235/357 (65%), Gaps = 54/357 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN +H SVPVS NED+N IVRT G+ EVRKKYS VDL M+DG DSE G VAG RGYFL
Sbjct: 137 GNLVHNSVPVSENEDDNEIVRTWGELEVRKKYSQVDLGIMVDGYDSERGCSVAGSRGYFL 196
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
KGP V L+ L+Q A+ +K YTPLYTPFFMRKEVMQEVAQL+ FD++LYKVIGK +
Sbjct: 197 KGPLVFLEQALIQLAMHMLFKKKYTPLYTPFFMRKEVMQEVAQLSDFDDQLYKVIGKSSE 256
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
V + E+ +KYLIATSEQPI A HRD W+ + SLP+RY+G STCFRQE
Sbjct: 257 VKEEIAEE----EKYLIATSEQPIAAYHRDEWISKESLPLRYVGFSTCFRQEVGSHGRDT 312
Query: 254 ---------------------------------------DLTKSIAYRVVNIVSGALNHA 274
T +I YRVV+IVSG LN+A
Sbjct: 313 SGIFRVHQFEKVEQFCITSPHDDASWEMLEEMISNAEMFYQTLNIPYRVVSIVSGELNNA 372
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFPGSGAFRELVSCSNC DYQSRRL +RYGQTKKM K EFVHMLN T CA
Sbjct: 373 AAKKYDLEAWFPGSGAFRELVSCSNCTDYQSRRLRIRYGQTKKMMAKAEFVHMLNGTMCA 432
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
TTR ICAILE Q E G+ +P+ LR+++P Y + IPFVK AP E+ K+ K
Sbjct: 433 TTRTICAILENFQEENGIAVPEALRQYMPDDYKD---FIPFVKPAPKVEQAAKRGSK 486
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 65/81 (80%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLD FR EKGG+ + VR +Q+ RF++V+LVD+V+E D +WR+ R+ +D +N+ KNLC
Sbjct: 1 MVLDLDNFRVEKGGNVQAVRVSQQKRFQSVDLVDQVVETDQEWRRSRYLSDEWNRLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK IGEK+K KEPV +STLP
Sbjct: 61 SKEIGEKIKRKEPVDGNSTLP 81
>gi|256080782|ref|XP_002576656.1| seryl-tRNA synthetase [Schistosoma mansoni]
Length = 619
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/336 (55%), Positives = 224/336 (66%), Gaps = 51/336 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN LHP VP+SNNE++N ++RT G ++ RK SHVDL+ M+DG D E G+ VAGGRGYFL
Sbjct: 138 GNLLHPDVPISNNEEDNLVIRTFGKSDFRKPLSHVDLVIMVDGFDGERGSTVAGGRGYFL 197
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE- 200
KGP V L+ ++ AL E+G+TPLYTPFFMRKE M+ VAQL+QFDEELYKV G+ E
Sbjct: 198 KGPLVFLEQAIINLALQMLDERGFTPLYTPFFMRKEAMRAVAQLSQFDEELYKVTGRREL 257
Query: 201 ---KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---- 253
DS + ++KYLIATSEQPI A H+D WLP LPI+Y G+STCFRQE
Sbjct: 258 NVTTNHDSQTNESGEEEKYLIATSEQPIAAFHQDEWLPIDQLPIKYAGISTCFRQEVGSH 317
Query: 254 ---------------------------------DLTKSIA----------YRVVNIVSGA 270
D S A YRVV+IVSG
Sbjct: 318 GRDTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFHQALKLPYRVVSIVSGE 377
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
LN+AA+ K DLE WFPGSGAFRELVSCSNCLDYQSRRL +R+GQTKKMN+ +E+VHMLNA
Sbjct: 378 LNNAASMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNA 437
Query: 331 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVY 366
T CATTRVICAILE +QTE G+ +PD L+ F+P Y
Sbjct: 438 TMCATTRVICAILENYQTEHGIIVPDVLKSFMPKKY 473
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDPE +R N+ RF+ + VD ++E D WR+ R +AD+ NK KN C
Sbjct: 1 MVLDLDLFRVDKGGDPELIRSNEIKRFRGTKRVDLLLEADENWRKARFRADHLNKVKNFC 60
Query: 61 SKVIGEKMK 69
SK I +K+K
Sbjct: 61 SKTIAKKIK 69
>gi|353232045|emb|CCD79400.1| seryl-tRNA synthetase [Schistosoma mansoni]
Length = 619
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/336 (55%), Positives = 223/336 (66%), Gaps = 51/336 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN LHP VP+SNNE++N ++RT G ++ RK SHVDL+ M+DG D E G+ VAGGRGYFL
Sbjct: 138 GNLLHPDVPISNNEEDNLVIRTFGKSDFRKPLSHVDLVIMVDGFDGERGSTVAGGRGYFL 197
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE- 200
KGP V L+ ++ AL E+G+TPLYTPFFMRKE M+ VAQL+QFDEELYKV G+ E
Sbjct: 198 KGPLVFLEQAIINLALQMLDERGFTPLYTPFFMRKEAMRAVAQLSQFDEELYKVTGRREL 257
Query: 201 ---KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---- 253
DS + ++KYLIATSEQPI A H+D WLP LPI+Y G+STCFRQE
Sbjct: 258 NVTTNHDSQTNESGEEEKYLIATSEQPIAAFHQDEWLPIDQLPIKYAGISTCFRQEVGSH 317
Query: 254 ---------------------------------DLTKSIA----------YRVVNIVSGA 270
D S A YRVV+IVSG
Sbjct: 318 GRDTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFHQALKLPYRVVSIVSGE 377
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
LN+AA+ K DLE WFPGSGAFRELVSCSNCLDYQSRRL +R+GQTKKMN +E+VHMLNA
Sbjct: 378 LNNAASMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNRSVEYVHMLNA 437
Query: 331 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVY 366
T CATTRVICAILE +QTE G+ +PD L+ F+P Y
Sbjct: 438 TMCATTRVICAILENYQTEHGIIVPDVLKSFMPKKY 473
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDPE +R N+ RF+ + VD ++E D WR+ R +AD+ NK KN C
Sbjct: 1 MVLDLDLFRVDKGGDPELIRSNEIKRFRGTKRVDLLLEADENWRKARFRADHLNKVKNFC 60
Query: 61 SKVIGEKMK 69
SK I +K+K
Sbjct: 61 SKTIAKKIK 69
>gi|226489506|emb|CAX75897.1| Seryl tRNA Synthetase [Schistosoma japonicum]
Length = 614
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/345 (55%), Positives = 228/345 (66%), Gaps = 54/345 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN LHP VP+S +E++N I+RT G ++ RK SHVDL+ M+DG D E G++VAGGRGYFL
Sbjct: 138 GNLLHPDVPISKDEEDNLIIRTFGKSDFRKPLSHVDLVVMVDGFDGERGSMVAGGRGYFL 197
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
KGP V L+ ++ AL E+GYT LYTPFFMRKE M+ VAQL+QFDEELYKV G+ E
Sbjct: 198 KGPLVFLEQAIINLALRMLDERGYTTLYTPFFMRKEAMRAVAQLSQFDEELYKVTGRREL 257
Query: 202 VG----DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---- 253
DS ++E ++KYLIATSEQPI A H++ WLP LPI+Y G+STCFRQE
Sbjct: 258 NATANHDSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQLPIKYAGISTCFRQEVGSH 317
Query: 254 ---------------------------------DLTKSIA----------YRVVNIVSGA 270
D S A YR+V+IVSG
Sbjct: 318 GRDTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFYQALKLPYRIVSIVSGE 377
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
LN+AAA K DLE WFPGSGAFRELVSCSNCLDYQSRRL +R+GQTKKMN+ +E+VHMLNA
Sbjct: 378 LNNAAAMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNA 437
Query: 331 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 375
T CATTRVICAILE +QTE G+ +PD LR +P Y N IPF
Sbjct: 438 TMCATTRVICAILENYQTEHGITVPDVLRSLMPKKYQN---FIPF 479
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDP+ +R N+ RF+ +LVD V+E D WR+ R +AD+ NK KNLC
Sbjct: 1 MVLDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVDLVVEADENWRKARFRADHLNKVKNLC 60
Query: 61 SKVIGEKMKAKEPVGD 76
SK I +++K E D
Sbjct: 61 SKAIAKRIKDNEDSPD 76
>gi|226489498|emb|CAX75893.1| Seryl tRNA Synthetase [Schistosoma japonicum]
Length = 614
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/345 (55%), Positives = 228/345 (66%), Gaps = 54/345 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN LHP VP+S +E++N I+RT G ++ RK SHVDL+ M+DG D E G++VAGGRGYFL
Sbjct: 138 GNLLHPDVPISKDEEDNLIIRTFGKSDFRKPLSHVDLVVMVDGFDGERGSMVAGGRGYFL 197
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
KGP V L+ ++ AL E+GYT LYTPFFMRKE M+ VAQL+QFDEELYKV G+ E
Sbjct: 198 KGPLVFLEQAIINLALRMLDERGYTTLYTPFFMRKEAMRAVAQLSQFDEELYKVTGRREL 257
Query: 202 VG----DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---- 253
DS ++E ++KYLIATSEQPI A H++ WLP LPI+Y G+STCFRQE
Sbjct: 258 NATANHDSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQLPIKYAGISTCFRQEVGSH 317
Query: 254 ---------------------------------DLTKSIA----------YRVVNIVSGA 270
D S A YR+V+IVSG
Sbjct: 318 GRDTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFYQALKLPYRIVSIVSGE 377
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
LN+AAA K DLE WFPGSGAFRELVSCSNCLDYQSRRL +R+GQTKKMN+ +E+VHMLNA
Sbjct: 378 LNNAAAMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNA 437
Query: 331 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 375
T CATTRVICAILE +QTE G+ +PD LR +P Y N IPF
Sbjct: 438 TMCATTRVICAILENYQTEHGITVPDVLRSLMPKKYQN---FIPF 479
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDP+ +R N+ RF+ +LVD V+E D WR+ R +AD+ NK KNLC
Sbjct: 1 MVLDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVDLVVEADENWRKARFRADHLNKVKNLC 60
Query: 61 SKVIGEKMKAKEPVGD 76
SK I +++K E D
Sbjct: 61 SKAIAKRIKDNEDSPD 76
>gi|226471434|emb|CAX70798.1| Seryl tRNA Synthetase [Schistosoma japonicum]
gi|226489502|emb|CAX75895.1| Seryl tRNA Synthetase [Schistosoma japonicum]
gi|226489504|emb|CAX75896.1| Seryl tRNA Synthetase [Schistosoma japonicum]
Length = 614
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/345 (55%), Positives = 228/345 (66%), Gaps = 54/345 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN LHP VP+S +E++N I+RT G ++ RK SHVDL+ M+DG D E G++VAGGRGYFL
Sbjct: 138 GNLLHPDVPISKDEEDNLIIRTFGKSDFRKPLSHVDLVVMVDGFDGERGSMVAGGRGYFL 197
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
KGP V L+ ++ AL E+GYT LYTPFFMRKE M+ VAQL+QFDEELYKV G+ E
Sbjct: 198 KGPLVFLEQAIINLALRMLDERGYTTLYTPFFMRKEAMRAVAQLSQFDEELYKVTGRREL 257
Query: 202 VG----DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---- 253
DS ++E ++KYLIATSEQPI A H++ WLP LPI+Y G+STCFRQE
Sbjct: 258 NATANHDSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQLPIKYAGISTCFRQEVGSH 317
Query: 254 ---------------------------------DLTKSIA----------YRVVNIVSGA 270
D S A YR+V+IVSG
Sbjct: 318 GRDTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFYQALKLPYRIVSIVSGE 377
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
LN+AAA K DLE WFPGSGAFRELVSCSNCLDYQSRRL +R+GQTKKMN+ +E+VHMLNA
Sbjct: 378 LNNAAAMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNA 437
Query: 331 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 375
T CATTRVICAILE +QTE G+ +PD LR +P Y N IPF
Sbjct: 438 TMCATTRVICAILENYQTEHGITVPDVLRSLMPKKYQN---FIPF 479
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDP+ +R N+ RF+ +LVD V+E D WR+ R +AD+ NK KNLC
Sbjct: 1 MVLDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVDLVVEADENWRKARFRADHLNKVKNLC 60
Query: 61 SKVIGEKMKAKEPVGD 76
SK I +++K E D
Sbjct: 61 SKAIAKRIKDNEDSPD 76
>gi|311334530|emb|CBN08646.1| seryl-tRNA synthetase [Microcosmus squamiger]
Length = 449
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/319 (58%), Positives = 214/319 (67%), Gaps = 51/319 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
N H SVP+SN+ED +N + RT GD E RK+YSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 136 ANLTHESVPISNDEDADNAVERTFGDCETRKRYSHVDLVVMVDGYEGERGAVVAGSRGYF 195
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKGP V L+ L+ AL + GYTPLYTPFFMRKE+MQEVAQL+QFDEELYKVIGK
Sbjct: 196 LKGPLVFLEQALINLALQTLADNGYTPLYTPFFMRKEMMQEVAQLSQFDEELYKVIGKAS 255
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK--- 257
D +D+KYLIATSEQPI A HRD WL LPI+Y G STCFRQE +
Sbjct: 256 DKSDEG-----VDEKYLIATSEQPIAAFHRDEWLKREDLPIKYAGFSTCFRQEAGSHGRD 310
Query: 258 ------------------------------------------SIAYRVVNIVSGALNHAA 275
I YR++NIVSGALN+AA
Sbjct: 311 TRGIFRVHQFEKIEQFVFSAPDDSWEAFDTMIGTAESFYKKLGIPYRIINIVSGALNNAA 370
Query: 276 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACAT 335
AKK DLEAWFPGSGAFRELVSCSNCLDYQ+RRL +R+GQTKKM EK EFVHMLNAT CAT
Sbjct: 371 AKKFDLEAWFPGSGAFRELVSCSNCLDYQARRLRIRFGQTKKMMEKTEFVHMLNATMCAT 430
Query: 336 TRVICAILETHQTETGVRI 354
TRVICAILE +QTE GV +
Sbjct: 431 TRVICAILENYQTEEGVVV 449
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 65/81 (80%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP+K+R+NQ R+ +V LVDKV+ D +WR+ R++ DN NK KN+C
Sbjct: 1 MVLDLDLFRKDKGGDPDKIRENQAKRYNDVTLVDKVVVADDEWRKCRYELDNLNKVKNVC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK IGEKMK KEPVG++ LP
Sbjct: 61 SKSIGEKMKRKEPVGETDELP 81
>gi|443700546|gb|ELT99427.1| hypothetical protein CAPTEDRAFT_120342, partial [Capitella teleta]
Length = 403
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/369 (52%), Positives = 243/369 (65%), Gaps = 55/369 (14%)
Query: 66 EKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
+++K + G++ N LH SVP+S++E+ N IV+T GD KKYSHVDLI MIDGV
Sbjct: 12 DRIKNEYERGEALKEVANILHDSVPISDDEENNLIVKTWGDVTTTKKYSHVDLIHMIDGV 71
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D+E G + AGGRGY+LKGPAV L+ L+ AL + KGY PLY PFFMRKEVMQEVAQL
Sbjct: 72 DAERGTVTAGGRGYYLKGPAVFLEQALINLALKQLYTKGYKPLYVPFFMRKEVMQEVAQL 131
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFD+ELYK++GKG + E+ +++KYLIATSEQP+ A HRD W+ LPI+Y G
Sbjct: 132 SQFDDELYKIVGKGSE----KAEESGVEEKYLIATSEQPLAAYHRDEWIATQDLPIKYAG 187
Query: 246 VSTCFRQE-----------------------------------------------DLTKS 258
STCFRQE + +
Sbjct: 188 TSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFCLCSPHDDESWKLFEEMLCNAETFNQSLG 247
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFP-GSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YR+V+IVSG LN++AAKK D+EAWFP G+GA+RELVSCSNCLDYQ+R L VRYGQTKK
Sbjct: 248 IPYRIVSIVSGELNNSAAKKNDIEAWFPSGNGAYRELVSCSNCLDYQARNLRVRYGQTKK 307
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
M ++ E+VHMLNAT CATTRVICAI+E +Q E G+ +P+ LR +P Y +IPFVK
Sbjct: 308 MGQETEYVHMLNATMCATTRVICAIMENNQVEDGIIVPEVLRPLMPQDYQE---KIPFVK 364
Query: 378 TAPIDEEET 386
API++E T
Sbjct: 365 PAPIEQEVT 373
>gi|170589916|ref|XP_001899719.1| Sars1 protein [Brugia malayi]
gi|158592845|gb|EDP31441.1| Sars1 protein, putative [Brugia malayi]
Length = 432
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/354 (53%), Positives = 234/354 (66%), Gaps = 56/354 (15%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN +HP+VPVS+NED N + +T GD + +KKYSH+DL MIDG D + G VAGGRGYFL
Sbjct: 85 GNIIHPTVPVSDNEDNNRVEKTFGDIKTKKKYSHIDLCMMIDGFDGDRGTSVAGGRGYFL 144
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK-GE 200
KGP V L+ ++ +AL KG+ LYTPFFMRKEVMQEVAQL QFD+ELYKV GK E
Sbjct: 145 KGPLVFLEQAVINFALQMLHCKGFIALYTPFFMRKEVMQEVAQLNQFDQELYKVTGKSSE 204
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
+GD D+KYLIATSEQPI A HR+ W+ EA LPI+Y G+S+CFRQ
Sbjct: 205 VIGDETN-----DEKYLIATSEQPIAAYHRNEWISEADLPIKYAGISSCFRQEVGSHGRD 259
Query: 253 -------------------------------------EDLTKS--IAYRVVNIVSGALNH 273
ED K+ I +R+V IVSG LN+
Sbjct: 260 TRGMFRVHQFEKVEQFVICSPYDDESWRILDEMVENAEDFCKALGIPFRIVCIVSGELNN 319
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AAAKKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYG+TKK++ ++ +VHMLN T C
Sbjct: 320 AAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKKLDGEVSYVHMLNGTMC 379
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 387
ATTRV+CA+LE +Q E G+R+P+ LR+F+P Y IPF+K API+ + K
Sbjct: 380 ATTRVLCALLENYQEENGIRVPEILRQFMPHPY---KELIPFIKEAPIENDLKK 430
>gi|68161049|gb|AAY86956.1| seryl-tRNA synthetase [Ictalurus punctatus]
Length = 347
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/333 (58%), Positives = 222/333 (66%), Gaps = 54/333 (16%)
Query: 114 SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFF 173
SHVDL+ M+DG + E GAI+AG RGYFLKGP V L+ L+ YAL K YT LYTPFF
Sbjct: 1 SHVDLVVMVDGYEGEKGAIIAGSRGYFLKGPLVFLEQALINYALRVLYSKNYTILYTPFF 60
Query: 174 MRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 233
MRKEVMQEVAQL+QFDEELYKVIGKG D +D+KYLIATSEQPI A RD W
Sbjct: 61 MRKEVMQEVAQLSQFDEELYKVIGKGSGHSDDT----SVDEKYLIATSEQPIAAFLRDEW 116
Query: 234 LPEASLPIRYLGVSTCFRQE---------------------------------------- 253
L LPIRY G+STCFRQE
Sbjct: 117 LKPEDLPIRYAGISTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHNHKSWEMFDEM 176
Query: 254 -----DLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSR 306
D +S+ YR+VNIVSG+LN+AA+KKLDLEAWFPGS AFRELVSCSNC DYQ+R
Sbjct: 177 IATAEDFYQSLGLPYRIVNIVSGSLNYAASKKLDLEAWFPGSQAFRELVSCSNCTDYQAR 236
Query: 307 RLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVY 366
RL +RYGQTKKM +K EFVHMLNAT CATTRVICAILE +QT G+ IP+ LR F+P
Sbjct: 237 RLRIRYGQTKKMMDKAEFVHMLNATMCATTRVICAILENYQTAEGIIIPEPLRVFMPP-- 294
Query: 367 VNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
+ + I FVK APID+E +KKQKKQ EG KKK
Sbjct: 295 -DLSEIIKFVKAAPIDQELSKKQKKQHEGGKKK 326
>gi|313226936|emb|CBY22081.1| unnamed protein product [Oikopleura dioica]
Length = 498
Score = 367 bits (941), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 193/364 (53%), Positives = 239/364 (65%), Gaps = 55/364 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN L P VP+SN+ED +N IVR G+ E RKKYSHVDL+ MIDGVD E G+ +AG RGYF
Sbjct: 142 GNLLGPDVPISNDEDADNAIVRLVGEVEARKKYSHVDLVQMIDGVDLERGSAIAGSRGYF 201
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKGP V L+ ++Q A +E Y L TPFFMRKE+MQ+VAQL+QFD+ELYKV+GKG
Sbjct: 202 LKGPLVFLEQAIIQLAQKHLLEGNYEMLQTPFFMRKEMMQKVAQLSQFDDELYKVVGKGS 261
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------- 253
+ PE + ++YLIATSEQPI A H D L SLPI+Y G+S CFRQE
Sbjct: 262 E----NPEDKSVSEQYLIATSEQPIAAFHYDEGLKPESLPIKYAGLSYCFRQEVGSHGRD 317
Query: 254 ----------------------------DLTK------------SIAYRVVNIVSGALNH 273
+L K I YR+VNI SGALN
Sbjct: 318 TTGIFRVKQFQKVEQFTFCSPHDNTSWDELEKMITMAENLYKEIGIGYRIVNICSGALNL 377
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AAAKK DLEAWFPGSGAFRELVSCSNCLDYQ+R L +R+G+TK++N+K ++VHMLNAT C
Sbjct: 378 AAAKKYDLEAWFPGSGAFRELVSCSNCLDYQARNLNIRFGETKQVNKKQDYVHMLNATMC 437
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
ATTRV+CAILET+Q + GV +P+ LR ++PA + +PFVK API+ E K +K+
Sbjct: 438 ATTRVMCAILETNQEQDGVVVPEALRPYMPAKWKE---FLPFVKEAPIEIEARKAAEKKN 494
Query: 394 EGMK 397
+G K
Sbjct: 495 KGKK 498
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 60/80 (75%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+ FR E+GG+P+ +RK Q+DRFKNVE+V K+++ D +WR+ + + KNLC
Sbjct: 1 MVLDISSFRAEEGGNPDTMRKLQQDRFKNVEVVQKIVDIDNQWRKEQFVLERTKFVKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTL 80
SK IG+KMKAKEP GD++ L
Sbjct: 61 SKTIGKKMKAKEPKGDTADL 80
>gi|313241186|emb|CBY33477.1| unnamed protein product [Oikopleura dioica]
Length = 498
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 193/364 (53%), Positives = 238/364 (65%), Gaps = 55/364 (15%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN L P VP+SN+ED +N IVR G E RKKYSHVDL+ MIDGVD E G+ +AG RGYF
Sbjct: 142 GNLLGPDVPISNDEDADNAIVRLVGVVEARKKYSHVDLVQMIDGVDLERGSAIAGSRGYF 201
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKGP V L+ ++Q A +E Y L TPFFMRKE+MQ+VAQL+QFD+ELYKV+GKG
Sbjct: 202 LKGPLVFLEQAIIQLAQKHLLEGNYEMLQTPFFMRKEMMQKVAQLSQFDDELYKVVGKGS 261
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
+ PE + ++YLIATSEQPI A H D L SLPI+Y G+S CFRQ
Sbjct: 262 E----NPEDKSVSEQYLIATSEQPIAAFHYDEGLKPESLPIKYAGLSYCFRQEVGSHGRD 317
Query: 253 -------------------------------------EDLTK--SIAYRVVNIVSGALNH 273
E+L K I YR+VNI SGALN
Sbjct: 318 TTGIFRVKQFQKVEQFTFCSPHDNTSWDELENMITMAENLYKEIGIGYRIVNICSGALNL 377
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AAAKK DLEAWFPGSGAFRELVSCSNCLDYQ+R L +R+G+TK++N+K ++VHMLNAT C
Sbjct: 378 AAAKKYDLEAWFPGSGAFRELVSCSNCLDYQARNLNIRFGETKQVNKKQDYVHMLNATMC 437
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
ATTRV+CAILET+Q + GV +P+ LR ++PA + +PFVK API+ E K +K+
Sbjct: 438 ATTRVMCAILETNQEQDGVVVPEALRPYMPAKWKE---FLPFVKEAPIEIEARKTAEKKN 494
Query: 394 EGMK 397
+G K
Sbjct: 495 KGKK 498
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+ FR E+GG P+ +RK Q DRFKNVE+V K+++ D +WR+ + + KNLC
Sbjct: 1 MVLDISSFRAEEGGSPDTMRKLQHDRFKNVEVVQKIVDIDNQWRKEQFVLERTKFVKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTL 80
SK IG+KMKAKEP GD++ L
Sbjct: 61 SKTIGKKMKAKEPKGDTADL 80
>gi|156400967|ref|XP_001639063.1| predicted protein [Nematostella vectensis]
gi|156226189|gb|EDO47000.1| predicted protein [Nematostella vectensis]
Length = 507
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/349 (55%), Positives = 227/349 (65%), Gaps = 58/349 (16%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN LH SV +SN+EDEN + R GD VRKKYSHVDL+ M+DGVD + G++VAG RGYFL
Sbjct: 137 GNILHDSVRISNDEDENPVDRIVGDCSVRKKYSHVDLVHMVDGVDIDRGSVVAGSRGYFL 196
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
KGP V L+ L+Q+A KG+ PL TPFFMRKEVMQEVAQL+QFDEELYKV+GKG
Sbjct: 197 KGPLVFLEHALIQHATRMLYGKGFIPLSTPFFMRKEVMQEVAQLSQFDEELYKVVGKG-- 254
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ--------- 252
D A ++KYLIATSEQPI A HR W+ + LP +Y G STCFRQ
Sbjct: 255 -ADEAG----YEEKYLIATSEQPIAAFHRGEWMDKNDLPKKYAGFSTCFRQEAGAHGRDT 309
Query: 253 ------------------------------------EDLTKS--IAYRVVNIVSGALNHA 274
E+ KS I YR+V+IVSGALN+A
Sbjct: 310 RGIFRVHQFEKIEQFVICSPHDNISWEIFDEMIGNAEEFHKSLGIPYRIVSIVSGALNNA 369
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKKLDLEAWFP SGAFRELVSCSNC DYQ+RRL VR+GQTKKM E+VHMLNAT CA
Sbjct: 370 AAKKLDLEAWFPASGAFRELVSCSNCTDYQARRLQVRFGQTKKMGVSTEYVHMLNATMCA 429
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDE 383
+RVICAILE +QTE GV +P L ++P + + FVK APID+
Sbjct: 430 VSRVICAILENNQTEEGVVMPQALHPYLP----QDLHFLKFVKPAPIDD 474
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 66/81 (81%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDL+R +KGG+P+K+R+NQ R+ +V LVDKV+E D +WR+FR DN+NK +NLC
Sbjct: 1 MVLDLDLYRADKGGNPDKIRENQSKRYSDVTLVDKVVEADTQWRKFRFSKDNWNKLRNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK IG+KMK KEPVGD TLP
Sbjct: 61 SKQIGDKMKKKEPVGDDETLP 81
>gi|320168775|gb|EFW45674.1| seryl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
Length = 493
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 198/372 (53%), Positives = 229/372 (61%), Gaps = 59/372 (15%)
Query: 72 EPVGDSST-LPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAG 130
E DS+ L GN + SVPVSNNED N I T GDT KKYSHVDLI MIDGVD E G
Sbjct: 130 EAARDSTLRLIGNLVDDSVPVSNNEDNNRIEHTVGDTTSEKKYSHVDLIHMIDGVDLERG 189
Query: 131 AIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE 190
VAG RGYFLKG V L+ L+QYA + +++ +TPL TPFFM K +MQEVAQL+QFD
Sbjct: 190 VTVAGNRGYFLKGATVMLEFALIQYAFTMLVQRDFTPLTTPFFMNKSIMQEVAQLSQFDT 249
Query: 191 ELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 250
ELYKV K + P + D+KYLIATSEQPI A HRD W+ LP RY G S+CF
Sbjct: 250 ELYKVHAKASE----NPNDNATDEKYLIATSEQPIAAFHRDEWMDTKELPKRYAGYSSCF 305
Query: 251 RQE---------------------------------------------DLTKS--IAYRV 263
RQE D ++ I YRV
Sbjct: 306 RQEVGSHGRDTAGIFRVHQFEKIEQFCITSPHDTESWQMMEQMLKNATDFYQNLGIGYRV 365
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNIVSG LN+AA+KK D+E WFPGS AFRELVSCSNC DYQSRRL +RYG TKK NE
Sbjct: 366 VNIVSGELNNAASKKYDVEGWFPGSKAFRELVSCSNCTDYQSRRLRIRYG-TKKANEDAT 424
Query: 324 FVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID- 382
FVHMLN+T CA TRVIC ILET+QTE G+ +P+ LR ++PA Y I FVK APID
Sbjct: 425 FVHMLNSTMCALTRVICIILETYQTEEGIVVPEVLRMYMPAQYRE---LIKFVKAAPIDK 481
Query: 383 --EEETKKQKKQ 392
E E K + K+
Sbjct: 482 AKEAEAKTKAKK 493
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 57/81 (70%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR KGG+P+KVR++Q+ R+ ++ LVD+VI D KWR R +AD++N+ CS
Sbjct: 1 MLDIELFRVNKGGNPDKVRESQRRRYADITLVDQVIALDEKWRALRGRADDWNRTAKACS 60
Query: 62 KVIGEKMKAKEPVGDSSTLPG 82
K G K +AKE GDS LP
Sbjct: 61 KQYGVKAQAKEAQGDSDDLPA 81
>gi|297279471|ref|XP_001089358.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic [Macaca mulatta]
Length = 459
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 200/425 (47%), Positives = 249/425 (58%), Gaps = 106/425 (24%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +AD
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVEDDESVPENVLNFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 246 VSTCFRQ---------------------------------------------EDLTKS-- 258
+STCFRQ E+ +S
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLG 356
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIE 323
+K++
Sbjct: 417 MDKVD 421
>gi|452822659|gb|EME29676.1| seryl-tRNA synthetase [Galdieria sulphuraria]
Length = 512
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 258/442 (58%), Gaps = 88/442 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ FRTEKGGDP+ + ++Q+ RF + E V KVIE D +WR+ R++ D K N S
Sbjct: 52 MLDINWFRTEKGGDPKVILESQRKRFASEEKVLKVIELDEEWRKNRYQGDQLRKQLNATS 111
Query: 62 KVIGEKMKAKE----------PVGDSSTLP------------------GNHLHPSVPVSN 93
K IG+K + E + +S ++ GN +H SV VS
Sbjct: 112 KEIGQKKRNNEDATELMEKVAEIKNSISVTEKRIEELEFQRDTLLKSIGNIVHESVFVSQ 171
Query: 94 NEDENGIVRTKGDTEVRKK-YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
+E EN ++R GD KK Y+HVDL+ MIDGV+ E G VAG RGY+LKGPAV +GL
Sbjct: 172 DESENPVLRQWGDFSSEKKGYNHVDLLYMIDGVEYEKGVSVAGNRGYYLKGPAVAFNLGL 231
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ Y L ++KGY PL TP+FM ++ M + AQL FDE+LYKV G+G +
Sbjct: 232 IHYGLQFLVKKGYLPLQTPYFMERDAMAKCAQLEDFDEQLYKVTGEGTQ----------- 280
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK--------------- 257
+KYLIATSEQPIC H + WL +LP+RY+G STCFR+E +
Sbjct: 281 -EKYLIATSEQPICCYHMNEWLDPKTLPLRYVGFSTCFRKETGSHGRDTLGIFRVHQFEK 339
Query: 258 --------------------------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
+I YRVVNIVSGALN+AAAKK DLE WF
Sbjct: 340 LEQFCITAPDPAVSYAMMEEMMHVAEEFYQSLNIPYRVVNIVSGALNNAAAKKYDLEGWF 399
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P S AFRELVSCSNC DYQ+RRL VRYG K + + ++VHMLN+T CATTRVIC ILE
Sbjct: 400 PASSAFRELVSCSNCTDYQARRLEVRYGLKKMGDREKKYVHMLNSTLCATTRVICCILEN 459
Query: 346 HQTETGVRIPDCLRKFVPAVYV 367
+QT G+++P+ L+ FV + ++
Sbjct: 460 YQTADGIKVPEVLQPFVGSSFL 481
>gi|168038680|ref|XP_001771828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676959|gb|EDQ63436.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 451
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 201/444 (45%), Positives = 258/444 (58%), Gaps = 84/444 (18%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ LFR E+G DPE++R++Q+ RF +VELVD+VI+ D +WRQ + + +N K N
Sbjct: 1 MLDILLFREERGNDPERIRESQRRRFASVELVDEVIKLDKEWRQRQFEVENMRKEVNKVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------SSTLPGNHLHPSVPVSNNEDENGIVRTKG 105
I +K AKE D L GN +H SVPV NNED N +VR G
Sbjct: 61 DGIKKKKIAKEDPADLLAEKTPVECKAAMEAKLRLVGNLVHDSVPVDNNEDNNQVVRKWG 120
Query: 106 DT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKG 164
E ++HVDL+ + V+ EAG VAGGRGYFLK V L L+ + LS I++G
Sbjct: 121 TLREEAGLFNHVDLVNKLGIVELEAGTDVAGGRGYFLKQYGVMLNQALINFGLSFLIKRG 180
Query: 165 YTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQP 224
YT L TPFFMR+EVM E AQLAQFDEELYKV G+G DDKYLIAT+EQP
Sbjct: 181 YTLLQTPFFMRQEVMAECAQLAQFDEELYKVTGEG-------------DDKYLIATAEQP 227
Query: 225 ICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------------------- 252
+CA+HR SW+ LPI+Y G STCFR+
Sbjct: 228 LCALHRGSWMDPKQLPIKYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDD 287
Query: 253 -------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
ED + + YRVV+IVSGALN +AAKK DLEAWFP S FRELVSC
Sbjct: 288 ESWKMHEEMLKNSEDFYQQLGLPYRVVSIVSGALNDSAAKKYDLEAWFPASKTFRELVSC 347
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIE-FVHMLNATACATTRVICAILETHQTETGVRIPD 356
SNC D+QSR L +RYGQ KKMN++++ + H+LN+T AT R +C ILE +QT G+R+P+
Sbjct: 348 SNCTDFQSRNLEIRYGQ-KKMNDQVKNYCHLLNSTLTATERTLCCILENYQTPEGLRVPE 406
Query: 357 CLRKFVPAVYVNEAGEIPFVKTAP 380
L+ F+ +PF + AP
Sbjct: 407 VLQPFMLGTDF-----LPFTQEAP 425
>gi|159467701|ref|XP_001692030.1| seryl-trna synthetase [Chlamydomonas reinhardtii]
gi|158278757|gb|EDP04520.1| seryl-trna synthetase [Chlamydomonas reinhardtii]
Length = 472
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 203/464 (43%), Positives = 254/464 (54%), Gaps = 108/464 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFRTEKGGDPE VR++Q+ RF +V LVD+VI D +WRQ R + D NK N +
Sbjct: 1 MLDINLFRTEKGGDPEIVRESQRRRFADVTLVDQVIALDAEWRQVRFQLDQLNKEFNALN 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K I KA G+S L GN +H SVP
Sbjct: 61 KEIATVRKAG---GNSDELQEKSKEMKKKIQETEEKEKDVIKTRDSKVVAIGNIVHDSVP 117
Query: 91 VSNNEDENGIVRTKGD-------TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
VS +E N IV+T G+ +K Y+HVDL+ ++ V+ EAG VAGGRGY+L
Sbjct: 118 VSQDEANNAIVKTFGECRPQVDPASGKKLYNHVDLVLLLGIVNMEAGQEVAGGRGYYLTH 177
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
V L L+ AL ++GY P++TPFFMR+E+M E AQL+QFD+ELYKV G+G
Sbjct: 178 EGVLLNQALINAALQMAYKRGYAPVHTPFFMRQEIMAECAQLSQFDDELYKVTGEG---- 233
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------- 252
DDKYLIATSEQ +CA+HR W +A LP +Y+G STCFR+
Sbjct: 234 ---------DDKYLIATSEQTLCAMHRKGWFEKADLPTKYVGYSTCFRKEVGSHGRDTLG 284
Query: 253 ----------------------------------EDLTKSIA--YRVVNIVSGALNHAAA 276
ED +S+ YRVVNIVSG LN+AA+
Sbjct: 285 IFRIHQFEKVEQFVIASPEGNASWEAMEEMLANAEDFYQSLGLPYRVVNIVSGELNNAAS 344
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKI--EFVHMLNATACA 334
KK DLEAWFP S FRELVSCSNCLDYQSRRL VR K + FVHMLN+T A
Sbjct: 345 KKYDLEAWFPASATFRELVSCSNCLDYQSRRLDVRLRTPKGAAAETTKSFVHMLNSTLTA 404
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
T R +C +LE +QT GVR+PD L+ F+ V IPF KT
Sbjct: 405 TERTLCCVLENYQTPDGVRVPDALKPFMAGVEF-----IPFRKT 443
>gi|168003459|ref|XP_001754430.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694532|gb|EDQ80880.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 464
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 196/438 (44%), Positives = 256/438 (58%), Gaps = 91/438 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ LFR E+G DPE++R++Q+ RF +VELVD+VI+ D +WRQ +++ DN K N
Sbjct: 1 MLDILLFREERGNDPERIRESQRRRFASVELVDEVIKLDKEWRQRQYEVDNIRKEVNKVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
I +K AKE + S L GN +H SVP+ N
Sbjct: 61 DGIKKKKMAKEDTAELLVEKSKLEEAKIAKEKETAECKVAMEASLRLVGNLVHDSVPIDN 120
Query: 94 NEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
NED N +VRT G + +HVDL+ + VD EAG VAGGRGYFLK V L L
Sbjct: 121 NEDNNLVVRTWGTPRDQSGLVNHVDLVNKLGIVDLEAGTDVAGGRGYFLKQYGVMLNQAL 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ + L+ +++GYT L TPFFMR+EVM E AQLAQFDEELYKV G+G
Sbjct: 181 INFGLAFLLKRGYTLLQTPFFMRQEVMAECAQLAQFDEELYKVTGEG------------- 227
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------- 252
DDKYLIAT+EQP+C+ HR SW+ +LPI+Y G STCFR+
Sbjct: 228 DDKYLIATAEQPLCSFHRGSWMDPKALPIKYAGYSTCFRKEAGSHGRDTLGIFRVHQFEK 287
Query: 253 ------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
E++ K+ + YRVV+IVSGALN +AAKK DLEAWF
Sbjct: 288 VEQFCITSPNDNDSWEVHEEMLKNSEEFYQQLGLPYRVVSIVSGALNDSAAKKYDLEAWF 347
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE-FVHMLNATACATTRVICAILE 344
P S +RELVSCSNC DYQSR L +RYGQ KKMN++++ + H+LN+T AT R +C ILE
Sbjct: 348 PASKTYRELVSCSNCTDYQSRNLEIRYGQ-KKMNDQVKNYCHLLNSTLTATERTLCCILE 406
Query: 345 THQTETGVRIPDCLRKFV 362
+QT GVR+P+ L+ F+
Sbjct: 407 NYQTPDGVRVPEVLQPFM 424
>gi|297281888|ref|XP_001087749.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like, partial [Macaca
mulatta]
Length = 491
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 184/353 (52%), Positives = 219/353 (62%), Gaps = 75/353 (21%)
Query: 97 ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYA 156
+N + R GD VRKKYSHVDL+ M+DG + E GA+VAG +GYFLKG V L+ L QYA
Sbjct: 3 DNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAMVAGSQGYFLKGVLVFLEQALTQYA 62
Query: 157 LSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKY 216
L + YTP+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG + D + D+KY
Sbjct: 63 LRTLGSRVYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDD----NSYDEKY 118
Query: 217 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------------------ 252
LI TSEQPI A+HRD WL LPI+Y G+STCFRQ
Sbjct: 119 LITTSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQF 178
Query: 253 ---------------------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
E+ +S I Y +VNIVSG+LNHAA+KKLDLEAWFPGSG
Sbjct: 179 VYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSG 238
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNE----------------------KIEFVHM 327
AFRELVSCSNC DYQ+RRL +RYGQTKKM + K+EFVHM
Sbjct: 239 AFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLHLSTQNKLEASLFSPKKVEFVHM 298
Query: 328 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
LNAT CATTR ICAILE +QTE G+ +P+ L++F+P E+ P V+ P
Sbjct: 299 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP--GPESASSPRVRILP 349
>gi|302789692|ref|XP_002976614.1| hypothetical protein SELMODRAFT_105474 [Selaginella moellendorffii]
gi|300155652|gb|EFJ22283.1| hypothetical protein SELMODRAFT_105474 [Selaginella moellendorffii]
Length = 456
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 194/455 (42%), Positives = 259/455 (56%), Gaps = 95/455 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++L R EKGGDPE+VR++Q+ R+ +VELVD+VI+ D +WR+ +H+ + + N S
Sbjct: 1 MLDINLVRQEKGGDPERVRESQRRRYASVELVDEVIQIDKEWRKLQHEVEGLRREGNRLS 60
Query: 62 KVIGEKMKAKEPVGD----------------------SSTLPG------NHLHPSVPVSN 93
K IG K + KE + STL G N +H SVPV N
Sbjct: 61 KEIGLKFRNKEDPSELKQKKLDLDNSLVSKEKEVESVKSTLDGKLKLIGNLVHDSVPVDN 120
Query: 94 NEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
+E++N ++RT G+ K +HVDL+ + D + G VAGGRGY+LKG V L L
Sbjct: 121 DEEKNAVIRTWGELRQEKNLKNHVDLVECLGFADIKRGTDVAGGRGYYLKGHGVLLNQAL 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ + L+ ++GY+PL P+FM+K+VM+E AQLAQFDEELYK+ K
Sbjct: 181 INFGLAFLTKRGYSPLQPPYFMKKDVMKECAQLAQFDEELYKLAEK-------------- 226
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------- 252
D+KYLIATSEQP+CA HR W+ SLPIRY G+STCFR+
Sbjct: 227 DEKYLIATSEQPLCAYHRGDWMDPKSLPIRYAGLSTCFRKEAGSHGRDTLGIFRVHQFDK 286
Query: 253 ------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
E++ K+ I Y+VV IVSGALN AAAKK DLEAWF
Sbjct: 287 IEQFCITSPLGDESWKMHEEMLKNSEDFYQELGIPYQVVVIVSGALNDAAAKKYDLEAWF 346
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P S A+RELVSCSNC DYQ+R L +RYGQT + FVH+LN+T AT R +C ILE
Sbjct: 347 PASKAYRELVSCSNCTDYQARNLDIRYGQTTANEQPKHFVHLLNSTLTATQRTLCCILEN 406
Query: 346 HQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+QTE G+R+P L+ ++ + IPF AP
Sbjct: 407 YQTEDGLRVPKALQPYMAGLEF-----IPFSVKAP 436
>gi|357129465|ref|XP_003566382.1| PREDICTED: seryl-tRNA synthetase-like [Brachypodium distachyon]
Length = 456
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 210/469 (44%), Positives = 260/469 (55%), Gaps = 98/469 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR EKGGDP+ VR +Q+ RF +VELVD+VI D +WRQ + + D + N S
Sbjct: 1 MLDINLFRKEKGGDPDLVRNSQRSRFASVELVDEVIVLDEEWRQRQFELDKIRQELNKTS 60
Query: 62 KVIGEKMKAKEP----------------------VGDS-STLP------GNHLHPSVPVS 92
K IG K+KAK+ V D+ STL GN +H SVPVS
Sbjct: 61 KEIG-KLKAKKQDATELIQSTEEIKSRLAAKETEVQDAKSTLDAKLVAIGNLVHESVPVS 119
Query: 93 NNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
N+E N IVRT G+ + +HVDL M+D V E GA VAGGRGYFLKG V L +
Sbjct: 120 NDEANNAIVRTWGERRLEGNLKNHVDLCLMLDIVALEKGADVAGGRGYFLKGNGVLLNMA 179
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
L+ + L+ +GYTP+ TPFFMRKE M AQLAQFDEELYKV G GE
Sbjct: 180 LINFGLAFLGIRGYTPMQTPFFMRKETMGRCAQLAQFDEELYKVTGDGE----------- 228
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------------- 252
+KYLIATSEQP+CA H + A LPIRY G STCFR+
Sbjct: 229 --EKYLIATSEQPLCAYHLGDRIYPADLPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFE 286
Query: 253 --------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAW 284
ED K I Y++V+IVSGALN AAAKK DLEAW
Sbjct: 287 KIEQFCVTSPNDNNSWELHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAW 346
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP S +RELVSCSNC DYQ+RRL + +GQ K + +FVHMLN+T AT R +C ILE
Sbjct: 347 FPASKTYRELVSCSNCTDYQARRLGIGFGQKKNDEQSKQFVHMLNSTLTATERTLCCILE 406
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
+Q E GV +P LR F+ + +PF K P+D ++ K K
Sbjct: 407 NYQKEDGVEVPKALRPFMGGIDF-----LPFKK--PLDSKQAADSKPTK 448
>gi|302783034|ref|XP_002973290.1| hypothetical protein SELMODRAFT_99251 [Selaginella moellendorffii]
gi|300159043|gb|EFJ25664.1| hypothetical protein SELMODRAFT_99251 [Selaginella moellendorffii]
Length = 456
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 193/455 (42%), Positives = 259/455 (56%), Gaps = 95/455 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++L R EKGGDPE+VR++Q+ R+ +VELVD+VI+ D +WR+ +H+ + + N S
Sbjct: 1 MLDINLVRQEKGGDPERVRESQRRRYASVELVDEVIQIDKEWRKLQHEVEGLRREGNRLS 60
Query: 62 KVIGEKMKAKEPVGD----------------------SSTLPG------NHLHPSVPVSN 93
K IG K + KE + STL G N +H SVPV N
Sbjct: 61 KEIGLKFRNKEDPSELKQKKLDLDNSLVSKEKEVESVKSTLDGKLKLIGNLVHDSVPVDN 120
Query: 94 NEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
+E++N ++RT G+ K +HVDL+ + D + G VAGGRGY+LKG V L L
Sbjct: 121 DEEKNAVIRTWGELRQEKNLKNHVDLVECLGFADIKKGTDVAGGRGYYLKGHGVLLNQAL 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ + L+ ++GY+PL P+FM+K+VM+E AQLAQFDEELYK+ K
Sbjct: 181 INFGLAFLTKRGYSPLQPPYFMKKDVMKECAQLAQFDEELYKLAEK-------------- 226
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------- 252
D+KYLIATSEQP+C+ HR W+ SLPIRY G+STCFR+
Sbjct: 227 DEKYLIATSEQPLCSYHRGDWMDPKSLPIRYAGLSTCFRKEAGSHGRDTLGIFRVHQFDK 286
Query: 253 ------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
E++ K+ I Y+VV IVSGALN AAAKK DLEAWF
Sbjct: 287 IEQFCITSPLGDESWKMHEEMLKNSEDFYQELGIPYQVVVIVSGALNDAAAKKYDLEAWF 346
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P S A+RELVSCSNC DYQ+R L +RYGQT + FVH+LN+T AT R +C ILE
Sbjct: 347 PASKAYRELVSCSNCTDYQARNLDIRYGQTTANEQPKHFVHLLNSTLTATQRTLCCILEN 406
Query: 346 HQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+QTE G+R+P L+ ++ + IPF AP
Sbjct: 407 YQTEDGLRVPKALQPYMAGLEF-----IPFSVKAP 436
>gi|148910656|gb|ABR18398.1| unknown [Picea sitchensis]
Length = 466
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/466 (42%), Positives = 263/466 (56%), Gaps = 97/466 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR +KG DPE+VR++Q+ RF VELVD+VIE D WRQ +++ DN K N +
Sbjct: 1 MLDINLFREDKGNDPERVRESQRRRFAKVELVDEVIELDKAWRQRQYELDNLRKEFNRIN 60
Query: 62 KVIGEKMKAKEPVGDSSTLP----------------------------GNHLHPSVPVSN 93
K + AKE ++ GN +H SVPVSN
Sbjct: 61 KEVARLKIAKEDASETIKQTEENRKLTAKKETEVQAAKVALDFLLGSIGNLVHDSVPVSN 120
Query: 94 NEDENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
+E N +VRT G+ E +HV+L+ ++ D + GA VAGGRG++LKG V L L
Sbjct: 121 DEANNEVVRTWGERREELNLKNHVELVQLLGIADLDKGADVAGGRGFYLKGDGVLLNQAL 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ + L+ ++G+ PL TPFFMRKEVM E AQLAQFDEELYKV G+G
Sbjct: 181 INFGLAFLRKRGFLPLQTPFFMRKEVMAECAQLAQFDEELYKVTGEG------------- 227
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------- 252
DDKYLIAT+EQP+CA HR W+ +LPIRY G S+CFR+
Sbjct: 228 DDKYLIATAEQPLCAYHRGDWIHPTTLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK 287
Query: 253 -------------------------EDLTK--SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
ED K +I Y++V+IVSGALN AAAKK DLEAWF
Sbjct: 288 VEQFCITSPNGKDSWDMHEEMIKNSEDFYKELNIPYQIVSIVSGALNDAAAKKYDLEAWF 347
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKI-EFVHMLNATACATTRVICAILE 344
P S A+RELVSCSNC D+QSR + +RYGQ KK NE++ ++VH+LN+T AT R IC ILE
Sbjct: 348 PASKAYRELVSCSNCTDFQSRNMEIRYGQ-KKSNEQVKQYVHLLNSTLSATERTICCILE 406
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
+Q E G+ IP LR F+ + +PF + + E + KK K
Sbjct: 407 NNQKEGGIEIPKVLRPFMLDIDF-----LPF-QNGSLKESKAKKTK 446
>gi|326431366|gb|EGD76936.1| seryl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
Length = 530
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 188/356 (52%), Positives = 224/356 (62%), Gaps = 65/356 (18%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDT---EVRKKYSHVDLITMIDGVDSEAGAIVAGGRG 138
GN LH SVPV ++E+ N IVRT G RKKYSHVDLI MIDGVDSE G AGGR
Sbjct: 149 GNELHESVPVHSDEEHNAIVRTVGKAAREHSRKKYSHVDLIVMIDGVDSERGVNAAGGRC 208
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
Y+L+GP VCL++ LV YAL + + +T L P FMRK+ MQ+VAQL+QFDEELYKV GK
Sbjct: 209 YYLRGPGVCLEMALVSYALQFLMARKFTALSPPLFMRKDAMQKVAQLSQFDEELYKVTGK 268
Query: 199 GEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----- 252
++ GD+A E +KYLIAT+EQPI A H++ + +P+RY+GVS CFRQ
Sbjct: 269 ASEIQGDTAVE-----EKYLIATAEQPIAAYHQEETIVPKDVPLRYVGVSECFRQEVGSH 323
Query: 253 ----------------------------------------EDLTKSIA--YRVVNIVSGA 270
ED KS+ Y+VVNIVSGA
Sbjct: 324 GRDTTGIFRVHQFKKIEQFVITSPHDGESWKMMDEMLTNAEDFLKSLGLPYQVVNIVSGA 383
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
LN AAAKKLD+EAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQ KKMN + E VHMLN+
Sbjct: 384 LNLAAAKKLDIEAWFPGSGAFRELVSCSNCTDYQARRLNIRYGQ-KKMNARTEHVHMLNS 442
Query: 331 TACATTRVICAILETHQ-----TETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPI 381
T CATTR IC ILE Q + G+ +P+ LR F+P Y IPFVK API
Sbjct: 443 TLCATTRTICCILENFQVGDLESNGGIVVPEVLRPFMPDQYKE---FIPFVKPAPI 495
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 1 MVLDLDLFRTEKGGD---PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFK 57
MVLD+ FR ++ D P+ VR+ Q+ RFK+V++VD +I D +WRQ D N K
Sbjct: 1 MVLDITSFREQEDPDVLGPDGVREIQRKRFKDVKVVDTIIAIDEQWRQCTFVTDKLNAAK 60
Query: 58 NLCSKVIGEKMKAKEPVGDSSTLP 81
N+CS I +KMKAKE GD+ +P
Sbjct: 61 NVCSNTIRDKMKAKEGQGDTDEIP 84
>gi|302837498|ref|XP_002950308.1| hypothetical protein VOLCADRAFT_81049 [Volvox carteri f.
nagariensis]
gi|300264313|gb|EFJ48509.1| hypothetical protein VOLCADRAFT_81049 [Volvox carteri f.
nagariensis]
Length = 472
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 200/463 (43%), Positives = 258/463 (55%), Gaps = 108/463 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFRTEKGGDPE VR++Q+ RF +V LVD+VIE+D +WRQ R + D NK N +
Sbjct: 1 MLDINLFRTEKGGDPEVVRESQRRRFADVSLVDQVIEHDSEWRQVRFQLDQLNKEFNALN 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K I KA G+S L GN +H SVP
Sbjct: 61 KEIATVRKAG---GNSDELQEKSKELKKKIQMTEEKEKEVIITRDTKLVSIGNIVHDSVP 117
Query: 91 VSNNEDENGIVRTKG------DTEVRKK-YSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
VS +E N IV+T G D + KK Y+HVDL+ ++ V+ EAG VAGGRGY+L
Sbjct: 118 VSQDETNNAIVKTFGEPRPSVDPDTGKKLYNHVDLVQLLGIVNLEAGQEVAGGRGYYLTN 177
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
V L L+ AL ++G++P++TPFFMR+E+M E AQL+QFD+ELYKV G+G
Sbjct: 178 EGVLLNQALINAALHFAYKRGFSPVHTPFFMRQEIMAECAQLSQFDDELYKVTGEG---- 233
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------- 252
DDKYLIATSEQ +CA+HR W ++ LPI+Y+G STCFR+
Sbjct: 234 ---------DDKYLIATSEQTLCAMHRKGWFEKSELPIKYVGYSTCFRKEVGSHGRDTLG 284
Query: 253 ----------------------------------EDLTKSIA--YRVVNIVSGALNHAAA 276
ED +S+ YRVVNIVSG LN+AA+
Sbjct: 285 IFRIHQFEKVEQFVIASPEGIASWEAMEEMLANAEDFYQSLGLPYRVVNIVSGELNNAAS 344
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKI--EFVHMLNATACA 334
KK DLEAWFP S FRELVSCSNCLDYQSRRL +R K + FVHMLN+T A
Sbjct: 345 KKYDLEAWFPASSTFRELVSCSNCLDYQSRRLDIRLRTPKGAAGEASKSFVHMLNSTLSA 404
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
T R +C +LE +QT GVR+P L+ ++ + + IPF K
Sbjct: 405 TERTLCCVLENYQTAEGVRVPKFLQPYMMGIEL-----IPFRK 442
>gi|224081391|ref|XP_002306393.1| predicted protein [Populus trichocarpa]
gi|222855842|gb|EEE93389.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 194/438 (44%), Positives = 259/438 (59%), Gaps = 91/438 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADN----FNK-- 55
+LD++LFR EKG +PEK+R++Q+ R+ N E+VD++I+ D +WRQ + + D+ FNK
Sbjct: 1 MLDINLFREEKGNNPEKIRESQRRRYANTEIVDEIIQFDNEWRQRQFELDSLRREFNKQN 60
Query: 56 --------FKNLCSKVIGEKMKAKEPVGDS------------STLP--GNHLHPSVPVSN 93
K ++ I E + K+ + D S LP GN +H SVPV++
Sbjct: 61 KKVAQLKIAKEDATEAIRETEETKKLIADKEKEVQEAKDALYSRLPTIGNLVHDSVPVND 120
Query: 94 NEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
NED N ++R G+ V KK +HVDL+ ++ D + GA VAGGRG++LKG V L L
Sbjct: 121 NEDFNAVIRAWGEKRVEKKLRNHVDLVELLGIADLKKGADVAGGRGFYLKGDGVRLNQAL 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ + L ++GYT L TPFFMRK+VM + AQLAQFDEELYKV G+G
Sbjct: 181 INFGLEFLEKRGYTALQTPFFMRKDVMAKCAQLAQFDEELYKVTGEG------------- 227
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------- 252
DDKYLIAT+EQP+CA H D W+ + LPIRY G S+CFR+
Sbjct: 228 DDKYLIATAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFRKEAGAHGRDTLGIFRVHQFEK 287
Query: 253 ------------------EDLTK---------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
E++ K +I Y+VV IVSGALN AAAKK DLE WF
Sbjct: 288 VEQFCITSPNGNDSWEMHEEMIKNSEEFYQELNIPYQVVAIVSGALNDAAAKKYDLEGWF 347
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKI-EFVHMLNATACATTRVICAILE 344
P S +RELVSCSNC DYQSRRL +RYGQ KK NE++ ++ H+LN+T AT R IC ILE
Sbjct: 348 PASNTYRELVSCSNCTDYQSRRLEIRYGQ-KKSNEQVKQYCHLLNSTLTATERTICCILE 406
Query: 345 THQTETGVRIPDCLRKFV 362
+Q E GV +P+ LRK++
Sbjct: 407 NYQKEDGVEVPEPLRKYM 424
>gi|357113577|ref|XP_003558579.1| PREDICTED: seryl-tRNA synthetase-like [Brachypodium distachyon]
Length = 456
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 208/468 (44%), Positives = 258/468 (55%), Gaps = 96/468 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR EKGGDP+ VR +Q+ RF +VELVD+VI D +WRQ + + D + N S
Sbjct: 1 MLDINLFRKEKGGDPDLVRNSQRSRFASVELVDEVIVLDEEWRQRQFELDKIRQELNKTS 60
Query: 62 KVIGE--------------------KMKAKEP-VGDS-STLP------GNHLHPSVPVSN 93
K IG+ ++ AKE V D+ STL GN +H SVPVSN
Sbjct: 61 KEIGKLKAKRLDATVLIQSTEEIKSRLAAKETEVQDAKSTLDAKLVTIGNLVHESVPVSN 120
Query: 94 NEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
+E N IVRT G+ + +HVDL M+D V E GA VAGGRGYFLKG V L + L
Sbjct: 121 DEANNAIVRTWGERRLEGNLKNHVDLCIMLDIVALEKGADVAGGRGYFLKGNGVLLNMAL 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ + L+ +GYT + TPFFMRKE M AQLAQFDEELYKV G GE
Sbjct: 181 INFGLAFLGIRGYTQMQTPFFMRKETMARCAQLAQFDEELYKVTGDGE------------ 228
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------- 252
+KYLIATSEQP+CA H + A LPIRY G STCFR+
Sbjct: 229 -EKYLIATSEQPLCAYHLGDRIYPADLPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEK 287
Query: 253 -------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWF 285
ED K I Y++V+IVSGALN AAAKK DLEAWF
Sbjct: 288 IEQFCVTSPNDNNSWELHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWF 347
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P S +RELVSCSNC DYQ+RRL + +GQ K + +FVHMLN+T AT R +C ILE
Sbjct: 348 PASKTYRELVSCSNCTDYQARRLGIGFGQKKNDEQSKQFVHMLNSTLTATERTLCCILEN 407
Query: 346 HQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
Q E GV +P LR F+ + +PF K P+D ++ K K
Sbjct: 408 FQKEDGVEVPKALRPFMGGIDF-----LPFKK--PLDSKQAADSKPNK 448
>gi|326519877|dbj|BAK03863.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 457
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/467 (43%), Positives = 258/467 (55%), Gaps = 98/467 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR EKGGDPE VR++Q+ RF VELVD+VI D WRQ + + D + N S
Sbjct: 1 MLDINLFRKEKGGDPELVRQSQRSRFAPVELVDEVIVLDEAWRQRQFELDKIRQELNKTS 60
Query: 62 KVIGEKMKAK-----------------------EPVGDSSTLP------GNHLHPSVPVS 92
K IG K+KAK E +TL GN +H SVP+S
Sbjct: 61 KEIG-KLKAKKQDATELIQSTEEIKKRLAAKETEVQEAKTTLDVKLVTIGNLVHESVPIS 119
Query: 93 NNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
N+E N IVRT G+ + + +HVDL M+D V + GA VAGGRG+FLKG V L
Sbjct: 120 NDEANNAIVRTWGEKRLEENLKNHVDLCIMLDIVSLDKGADVAGGRGFFLKGDGVLLNQA 179
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
L+ + LS ++ +TP+ TPFFMRKE+M + AQLAQFDEELYKV G GE
Sbjct: 180 LINFGLSFLRKRDFTPMQTPFFMRKEIMAKCAQLAQFDEELYKVTGDGE----------- 228
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------------- 252
DKYLIATSEQP+CA H + A LPIRY G STCFR+
Sbjct: 229 --DKYLIATSEQPLCAYHLGDRIYPADLPIRYAGFSTCFRKEAGSHGRDTAGIFRVHQFE 286
Query: 253 --------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAW 284
ED ++I Y++V+IVSGALN AAAKK DLEAW
Sbjct: 287 KIEQFCATNPNDNVSWEMHEEMIKNAEDFYQAIGLPYQLVSIVSGALNDAAAKKYDLEAW 346
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP S FRELVSCSNC DYQ+RRL + YGQ K + +FVHMLN+T AT R +C ILE
Sbjct: 347 FPASKTFRELVSCSNCTDYQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILE 406
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
+Q E GV +P LR F+ + +PF + P+D ++ K
Sbjct: 407 NYQREGGVEVPVVLRPFMLGIDF-----LPFKR--PLDSKQAAADSK 446
>gi|225450981|ref|XP_002284787.1| PREDICTED: seryl-tRNA synthetase [Vitis vinifera]
gi|296088317|emb|CBI36762.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 199/466 (42%), Positives = 265/466 (56%), Gaps = 97/466 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADN----FNKF- 56
+LD++LFR +KG +PE +R++Q+ R+ NVELVD+VI D +WRQ + + +N FNK
Sbjct: 1 MLDINLFREDKGHNPEIIRESQRRRYANVELVDEVIHLDKEWRQRQFEYENLRKEFNKIN 60
Query: 57 -----------------------KNLCSKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSN 93
K L SK E +A + + GN +H SVPVSN
Sbjct: 61 KQVAKLKISGEDASEMIKSTDENKRLTSKKEAEVQEALAALNSKLEIIGNLVHDSVPVSN 120
Query: 94 NEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
+E N ++R+ G+ +V K +HV+L+ ++ D + GA +AGGRG++LKG V L L
Sbjct: 121 DEANNAVIRSWGEKKVEPKLKNHVELVELLGIADLKKGANIAGGRGFYLKGDGVRLNQAL 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ + L ++GYT L TPFFMRK++M + AQLAQFDEELYKV G+G
Sbjct: 181 INFGLDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEG------------- 227
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------- 252
DDKYLIAT+EQP+CA H D W+ + LP+RY G S+CFR+
Sbjct: 228 DDKYLIATAEQPLCAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK 287
Query: 253 -------------------------EDLTK--SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
ED K +I Y+VV IVSGALN AAAKK DLE WF
Sbjct: 288 VEQFCITSPNGNDSWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEGWF 347
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKI-EFVHMLNATACATTRVICAILE 344
P S +RELVSCSNC DYQSRRL +RYGQ KK NE+I ++VH+LN+T AT R IC ILE
Sbjct: 348 PASQTYRELVSCSNCTDYQSRRLEIRYGQ-KKSNEQIKQYVHLLNSTLTATERTICCILE 406
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
+Q E GV +P+ LR F+ +PF +T+P E + KK K
Sbjct: 407 NYQKEDGVEVPEPLRPFMGGKTF-----LPF-QTSPATEAKGKKSK 446
>gi|356535091|ref|XP_003536082.1| PREDICTED: seryl-tRNA synthetase-like [Glycine max]
Length = 447
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 198/465 (42%), Positives = 267/465 (57%), Gaps = 95/465 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADN----FNKFK 57
+LD++LFR EKG +PE +R++Q+ RF +VE+VD+VI D +WR+ + + +N FNK
Sbjct: 1 MLDINLFREEKGHNPELIRESQRRRFASVEIVDEVINLDKEWRKRQFELENLRKEFNKIN 60
Query: 58 NLCSKV----------IGEKMKAKEPVGD------------SSTLP--GNHLHPSVPVSN 93
SK+ I E + K+ + + +S L GN +H SVP+SN
Sbjct: 61 KEVSKLKRAGEDASKFITESEETKKSIAEKEVEVRETLNLLNSKLETIGNLVHDSVPISN 120
Query: 94 NEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
+E N +VR+ G+ V K +HVDL+ ++ D++ GA VAGGRG++LKG V L L
Sbjct: 121 DEANNVVVRSWGEKRVEPKLKNHVDLVELLGIADTKKGADVAGGRGFYLKGDGVRLNQAL 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ + L ++ YT L+TPFFMRK++M + AQLAQFDEELYKV G+G
Sbjct: 181 INFGLDFLDKREYTLLHTPFFMRKDIMSKCAQLAQFDEELYKVTGEG------------- 227
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------- 252
DDKYLIAT+EQP+CA H D W+ LPIRY G S+CFR+
Sbjct: 228 DDKYLIATAEQPLCAYHLDDWIHPTQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK 287
Query: 253 -------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
ED K+ + Y+VV+IVSGALN AAAKK DLEAWF
Sbjct: 288 VEQFCLTSPNDNDSWDMHEEMLKNSEDFYKALNLPYQVVSIVSGALNDAAAKKYDLEAWF 347
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P S A+RELVSCSNC DYQ+RRL +RYGQ K + ++VH+LN+T AT R IC ILE
Sbjct: 348 PASQAYRELVSCSNCTDYQARRLEIRYGQKKSNEQMKQYVHLLNSTLTATERTICCILEN 407
Query: 346 HQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
+Q E GV IP+ LR F+ +PF K+ P +E + KK K
Sbjct: 408 NQKEDGVEIPEVLRPFMGGKTF-----LPF-KSQPSNEAKGKKSK 446
>gi|167524046|ref|XP_001746359.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775121|gb|EDQ88746.1| predicted protein [Monosiga brevicollis MX1]
Length = 887
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 188/392 (47%), Positives = 234/392 (59%), Gaps = 89/392 (22%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEV---RKKYSHVDLITMIDGVDSEAGAIVAGGRG 138
GN LHPSVP+S+NED N I+RT GD V RK+YSHVDLITMIDGVD++ G + AG R
Sbjct: 258 GNVLHPSVPISDNEDNNLILRTVGDAAVNQTRKEYSHVDLITMIDGVDTQRGTVAAGSRC 317
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE----------------- 181
Y+LKG AV L+ L +++ +++G+T L P FMRKEVMQE
Sbjct: 318 YYLKGAAVALEQALCAFSVQFLMDRGFTALSPPLFMRKEVMQEVRTLEFCLVATRVMCHT 377
Query: 182 ----------VAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRD 231
VAQL+QF+EELYKV GK + + A E+++KYLIAT+EQPI A HR+
Sbjct: 378 DRFRMFLRTQVAQLSQFNEELYKVTGKASERAEDA----EVEEKYLIATAEQPIAAFHRN 433
Query: 232 SWLPEASLPIRYLGVSTCFRQ--------------------------------------- 252
W+ LP+RY+GVS CFRQ
Sbjct: 434 EWINPEELPLRYVGVSECFRQEVGSHGRDTLGIFRVHQFKKIEQFVICSPHDDISWKLMD 493
Query: 253 ------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQ 304
ED K+I Y+VV+IVSGALN AAAKK D+EAWFPGSGAFRELVSCSNC DYQ
Sbjct: 494 EMLANAEDFLKAIGLPYQVVSIVSGALNLAAAKKNDVEAWFPGSGAFRELVSCSNCTDYQ 553
Query: 305 SRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET-----GVRIPDCLR 359
+RRL +RYGQTKK+N + ++VHMLN+T CATTR +C ILE Q GV +P+ LR
Sbjct: 554 ARRLKIRYGQTKKLNARTDYVHMLNSTLCATTRNVCCILENFQVGNFSNGGGVVVPEVLR 613
Query: 360 KFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
++P+ Y IPFVK APID E + K
Sbjct: 614 PYMPSQYRE---FIPFVKPAPIDVERAAAEAK 642
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 4 DLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKV 63
D+ + RT+ P V+K Q+DR+K+ LV ++++ DL WRQ K D ++K KN +K
Sbjct: 122 DVTIGRTQVVRQP-GVKKIQRDRYKDEGLVQQIMDADLAWRQTAFKRDLYSKVKNATAKT 180
Query: 64 IGEKMKAKEPVGDSSTLPGN 83
+G KMKAKE VGDS LP N
Sbjct: 181 VGAKMKAKEAVGDSDALPAN 200
>gi|356576773|ref|XP_003556504.1| PREDICTED: seryl-tRNA synthetase-like [Glycine max]
Length = 447
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 197/465 (42%), Positives = 266/465 (57%), Gaps = 95/465 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADN----FNKFK 57
+LD++LFR EKG +PE +R++Q+ RF +VE+VD+VI D +WR+ + + +N FNK
Sbjct: 1 MLDINLFREEKGHNPEFIRESQRRRFASVEVVDEVINLDKEWRKRQFELENLRKEFNKIN 60
Query: 58 NLCSKV----------IGEKMKAKEPVGD------------SSTLP--GNHLHPSVPVSN 93
SK+ I E + K+ +G+ +S L GN +H SVP+S
Sbjct: 61 KEVSKLKRAGEDATKFISESEETKKSIGEKEVEVRETLNLLNSKLETIGNLVHDSVPISQ 120
Query: 94 NEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
+E N +VR+ G+ V K +HVDL+ ++ D++ GA VAGGRG++LKG V L L
Sbjct: 121 DEANNVVVRSWGEKRVEPKLKNHVDLVELLGIADTKKGADVAGGRGFYLKGDGVRLNQAL 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ + L ++ YT L+TPFFMRK++M + AQLAQFDEELYKV G+G
Sbjct: 181 INFGLDFLEKREYTLLHTPFFMRKDIMSKCAQLAQFDEELYKVTGEG------------- 227
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------- 252
DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+
Sbjct: 228 DDKYLIATAEQPLCAYHLDDWIHPTQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK 287
Query: 253 -------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
ED K+ + Y+VV+IVSGALN AAAKK DLEAWF
Sbjct: 288 VEQFCLTSPNDNDSWDMHEEMLKNSEDFYKALNLPYQVVSIVSGALNDAAAKKYDLEAWF 347
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P S A+RELVSCSNC DYQ+RRL +RYGQ K + ++VH+LN+T AT R IC ILE
Sbjct: 348 PASQAYRELVSCSNCTDYQARRLEIRYGQKKSNEQMKQYVHLLNSTLTATERTICCILEN 407
Query: 346 HQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
+Q E GV IP+ LR F+ +PF K P +E + KK K
Sbjct: 408 NQKEDGVEIPEALRPFMGGKTF-----LPF-KNQPSNEAKGKKSK 446
>gi|428180811|gb|EKX49677.1| hypothetical protein GUITHDRAFT_67599 [Guillardia theta CCMP2712]
Length = 465
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 198/478 (41%), Positives = 256/478 (53%), Gaps = 116/478 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ FR EKGGDPEKVR++Q+ R K+V++VDKVIE D++WRQ + K DN +
Sbjct: 1 MLDINGFREEKGGDPEKVRESQRRRHKDVQIVDKVIEADVQWRQLQFKVDNLRGDYGKVN 60
Query: 62 KVIGEKMKAKEPVGDSSTLP----------------------------GNHLHPSVPVSN 93
K + K KA E + GN + SVPVS+
Sbjct: 61 KEVAMKKKAGENADELIAKAKEIDAEIKAAEELCNKCMAERDEMLCKIGNLVPDSVPVSD 120
Query: 94 NEDENGIVRTKGDTEVRK----------------------KYSHVDLITMIDGVDSEAGA 131
+ED N I+RT +V + K SHVDL+ M+ D+E GA
Sbjct: 121 DEDNNAIIRTFALEKVLQTESVPEFKIVKELDAAASKHEGKLSHVDLVPMLGLADTERGA 180
Query: 132 IVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEE 191
+AG RGYFL G V L L+ Y L+ +GY P+ TPFFM+K+ M VAQLAQFDEE
Sbjct: 181 AIAGNRGYFLVGDGVLLNQALISYGLAFLCPRGYVPIQTPFFMQKDAMAAVAQLAQFDEE 240
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
LYKV G+G DDKYLIATSEQPICA HR+ W+ LP +Y+G+STCFR
Sbjct: 241 LYKVSGEG-------------DDKYLIATSEQPICAYHRNLWVDPKELPRKYVGISTCFR 287
Query: 252 Q---------------------------------------------EDLTKS--IAYRVV 264
+ E+ KS I YRVV
Sbjct: 288 KEVGSHGRDTLGIFRVHQFEKIEQFCVTSPEDNKSWEMLEEMIGTSEEFYKSLGIPYRVV 347
Query: 265 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEF 324
IVSGALN AAAKK DLEAWFPGSGA+RELVSCSNC DYQ+RR+ R+G + +K +
Sbjct: 348 AIVSGALNDAAAKKYDLEAWFPGSGAYRELVSCSNCTDYQARRVETRFGAS-AAQKKQSY 406
Query: 325 VHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
VHMLN+T AT R +C ++E +QTE G+ +P+ L+ F+ IPFV P++
Sbjct: 407 VHMLNSTLTATERTLCCLVENYQTEDGMNVPEVLQPFMGGKKF-----IPFVNPKPVE 459
>gi|241061140|ref|XP_002408067.1| seryl-tRNA synthetase, putative [Ixodes scapularis]
gi|215492361|gb|EEC02002.1| seryl-tRNA synthetase, putative [Ixodes scapularis]
Length = 446
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 205/466 (43%), Positives = 257/466 (55%), Gaps = 95/466 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDL+LFR +KGGDPEK+R+NQ+ RFK+ LVDKV++ D WR+ RH+ DN+NK KNLC
Sbjct: 1 MVLDLELFRADKGGDPEKIRENQRRRFKDPGLVDKVVDADTVWRKLRHQLDNWNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLH-------------------------PSVPVSNNE 95
SK IG+KMK KE VG+ LP + + V NE
Sbjct: 61 SKEIGQKMKKKEHVGEGDNLPDSVVQGLSELTSEVLQGLTVNQIKRVRVLIDEAIVQCNE 120
Query: 96 D-------ENGIVRTKG-----------------------DTEVRKKYSHVDLITMIDGV 125
D N +R G D RKKYSHVDLI MIDG+
Sbjct: 121 DLEKHEGVRNDALREMGNWLHESCVVSNDEEENAVIKTHGDVVTRKKYSHVDLIVMIDGM 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVM------ 179
D + G++ AGGRGY+L G+ + L E+ + ++ E +
Sbjct: 181 DGDRGSVTAGGRGYYLMVVGKGGDGGVDEKYLIATSEQPIAAFHRDEWLSPEALPLRYAG 240
Query: 180 ------QEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 233
QEV + +++V + EKV +++ I + D
Sbjct: 241 LSSCFRQEVGSHGRDTRGIFRV-HQFEKV-----------EQFCITSPHDNKSWEMFDEM 288
Query: 234 LPEASLPIRYLGVSTCFRQEDLTKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRE 293
+ A + LG I YRVV+IVSGALN+AAAKK DLEAWFP SGAFRE
Sbjct: 289 IGNAEEFCQKLG-------------IPYRVVSIVSGALNNAAAKKHDLEAWFPASGAFRE 335
Query: 294 LVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVR 353
LVSCSNCLDYQSRRLL+RYGQTKKMN + E+VHMLNAT CA TRVICAILE HQTETGV
Sbjct: 336 LVSCSNCLDYQSRRLLIRYGQTKKMNAQTEYVHMLNATMCAVTRVICAILENHQTETGVV 395
Query: 354 IPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
+P+ LR F+P + IPFVK AP+DE ETKKQ+K +EGM+KK
Sbjct: 396 VPEALRPFMPPAFRE---LIPFVKPAPVDEAETKKQRKHREGMEKK 438
>gi|115437620|ref|NP_001043340.1| Os01g0559100 [Oryza sativa Japonica Group]
gi|57899337|dbj|BAD87948.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group]
gi|57900427|dbj|BAD87663.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group]
gi|113532871|dbj|BAF05254.1| Os01g0559100 [Oryza sativa Japonica Group]
Length = 425
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 248/421 (58%), Gaps = 71/421 (16%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFRTEKGGDPE +R++Q++R +VELVD+VI D +WRQ + + D + N S
Sbjct: 1 MLDINLFRTEKGGDPELIRRSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTS 60
Query: 62 KVIGEKMKAKEPVGDS---STLP------GNHLHPSVPVSNNEDENGIVRTKGDTEVRKK 112
K IG K+KAK+ + STL GN +H SVPVS++E N IVRT G+ +
Sbjct: 61 KEIG-KLKAKKEDASALIQSTLDAKLVTIGNIVHESVPVSDDEANNLIVRTWGERRLEGN 119
Query: 113 Y-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTP 171
+HVDL M+D V E GA VAGGRGY+LK V L + L+ + L+ ++G+ P+ TP
Sbjct: 120 LKNHVDLCKMLDIVALEKGADVAGGRGYYLKDEGVLLNLALINFGLAFLRKRGFKPMQTP 179
Query: 172 FFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRD 231
FFMRKE M + AQLAQFDEELYK+ G GE +KYLIATSEQP+CA H
Sbjct: 180 FFMRKETMGKCAQLAQFDEELYKLTGDGE-------------EKYLIATSEQPLCAYHLG 226
Query: 232 SWLPEASLPIRYLGVSTCFRQ--------------------------------------- 252
+ A LPIRY G STCFR+
Sbjct: 227 DRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDNESWEMHE 286
Query: 253 ------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQ 304
ED K I Y++V+IVSGALN AAAKK DLEAWFP S +RELVSCSNC D+Q
Sbjct: 287 EMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDFQ 346
Query: 305 SRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPA 364
+RRL + YGQ K + +FVHMLN+T AT R +C ILE Q E GV +P L+ ++
Sbjct: 347 ARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKENGVEVPKALQPYMGG 406
Query: 365 V 365
+
Sbjct: 407 I 407
>gi|357441653|ref|XP_003591104.1| Seryl-tRNA synthetase [Medicago truncatula]
gi|355480152|gb|AES61355.1| Seryl-tRNA synthetase [Medicago truncatula]
Length = 447
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 197/466 (42%), Positives = 269/466 (57%), Gaps = 97/466 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR EKG +PE +R++Q+ RF +VE+VD+VI D +WR+ + + +N K N +
Sbjct: 1 MLDINLFRVEKGHNPEIIRESQRRRFASVEVVDEVINLDKEWRKRQFEFENLRKEVNKIN 60
Query: 62 KVIG----------------EKMK---AKEPVGDSSTLP---------GNHLHPSVPVSN 93
K + E++K A++ V TL GN +H SVP+SN
Sbjct: 61 KEVSKLKRGGEDATEFIAKSEEIKKKIAEKEVEAQETLNLLNSKLETIGNLVHDSVPISN 120
Query: 94 NEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
+E N +VRT G+ K +HVDL+ +++ D + GA VAGGRG++LKG V L L
Sbjct: 121 DEANNLVVRTWGEKRDEPKLKNHVDLVDLLEIADLKKGADVAGGRGFYLKGDGVFLNQAL 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ + L+ E+GYT L+TPFF++K++M + AQLAQFDEELYKV G+G
Sbjct: 181 IMFGLNFLAERGYTALHTPFFIKKDIMSKCAQLAQFDEELYKVTGEG------------- 227
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------- 252
DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+
Sbjct: 228 DDKYLIATAEQPLCAYHSDEWIHPTRLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK 287
Query: 253 -------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
ED K+ I Y++V+IVSGALN AAAKK DLEAWF
Sbjct: 288 VEQFCMTTPNDNDSWDMHEEMLKNSEDFYKALNIPYQIVSIVSGALNDAAAKKYDLEAWF 347
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKI-EFVHMLNATACATTRVICAILE 344
P S +RELVSCSNC DYQ+R+L +RYGQ KK NE++ ++VH+LN+T AT R IC ILE
Sbjct: 348 PASKTYRELVSCSNCTDYQARKLEIRYGQ-KKSNEQLKQYVHLLNSTLTATERTICCILE 406
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
+Q E GV IP+ LR F+ +PF K P +E + KK K
Sbjct: 407 NNQNEDGVEIPEVLRPFMFGKTF-----LPF-KNQPNNEAKGKKSK 446
>gi|391345708|ref|XP_003747126.1| PREDICTED: probable serine--tRNA ligase, cytoplasmic-like isoform 3
[Metaseiulus occidentalis]
Length = 437
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/482 (42%), Positives = 249/482 (51%), Gaps = 155/482 (32%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKV--IENDLK--------WRQFRH-- 48
MVL+LD FR +KGG EK+RKNQ DRFK+V LVDKV ++N+ + W + R+
Sbjct: 1 MVLELDDFRDDKGGSAEKIRKNQADRFKDVTLVDKVVELDNEWRRQRHVLDQWNKLRNSC 60
Query: 49 -----------KADNFNKFK-------------------NLCSKVIGEKMKAKEPVG--- 75
+AD N V+G+ +A E
Sbjct: 61 SKAIGDKKKKKEADGEGDLPGDFALSHELLNDAISALSINQIKTVVGKIAEAIESTNVRL 120
Query: 76 --------DSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDS 127
++ N L V +S+NED N ++RT GD KKYSHVDLI MIDG+D
Sbjct: 121 VELETERNENLREVANWLGKDVVISDNEDNNAVIRTYGDCTTSKKYSHVDLIVMIDGMDG 180
Query: 128 EAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQ 187
+ G +VAGGRGYFLK
Sbjct: 181 DRGTVVAGGRGYFLK--------------------------------------------- 195
Query: 188 FDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVS 247
ELYKV+GKG + D + E+D+KYLIATSEQPICA H+D WL A LPI+Y G+S
Sbjct: 196 ---ELYKVVGKGSEKAD----EKEVDEKYLIATSEQPICAFHKDEWLSPADLPIKYAGLS 248
Query: 248 TCFRQEDLTK-----------------------------------------------SIA 260
TCFRQE + ++
Sbjct: 249 TCFRQEVGSHGRDTRGIFRVHQFEKIEQFVITSPLDDESWKAFDEMIGNAEAFCQALNLP 308
Query: 261 YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE 320
YR+VNIVSGALN+AAAKK DLEAWFP SGAFRELVSCSNCLDYQSRRL +RYGQTKKMNE
Sbjct: 309 YRIVNIVSGALNNAAAKKFDLEAWFPASGAFRELVSCSNCLDYQSRRLQIRYGQTKKMNE 368
Query: 321 KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
K +VHMLNAT CATTRVIC ILE Q E G+R+P+ LR ++P + +IPFVK AP
Sbjct: 369 KTPYVHMLNATMCATTRVICCILENCQEEDGIRVPEALRPWMPEQFRE---KIPFVKPAP 425
Query: 381 ID 382
ID
Sbjct: 426 ID 427
>gi|226499136|ref|NP_001140663.1| seryl-tRNA synthetase isoform 1 [Zea mays]
gi|194700466|gb|ACF84317.1| unknown [Zea mays]
gi|414591450|tpg|DAA42021.1| TPA: seryl-tRNA synthetase isoform 1 [Zea mays]
gi|414591451|tpg|DAA42022.1| TPA: seryl-tRNA synthetase isoform 2 [Zea mays]
gi|414591452|tpg|DAA42023.1| TPA: seryl-tRNA synthetase isoform 3 [Zea mays]
Length = 458
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/442 (43%), Positives = 243/442 (54%), Gaps = 91/442 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFRT+KGG+PE +R++Q+ RF +VELVD+VI D WR+ + + D + N S
Sbjct: 1 MLDINLFRTDKGGNPELIRESQRSRFASVELVDEVIALDKAWRERQFELDKIRQELNATS 60
Query: 62 KVIG------------------------------EKMKAKEPVGDSSTLPGNHLHPSVPV 91
K IG E +AK + T GN +H SVPV
Sbjct: 61 KKIGKLKASKQEEEAKKLMESTDEIKKRLAAKEVEVQEAKSTLDAKLTTIGNIVHESVPV 120
Query: 92 SNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
S +E N IVRT G+ V + +HVDL M+D V E GA VAGGRG++LK V L +
Sbjct: 121 SEDEANNKIVRTFGEKRVEENLKNHVDLCRMLDIVALEKGADVAGGRGFYLKDEGVLLNL 180
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ + L+ ++G+ P+ TPFFMRKE M + AQLAQFDEELYKV G GE
Sbjct: 181 ALINFGLAFLRKRGFKPMQTPFFMRKETMAKCAQLAQFDEELYKVTGDGE---------- 230
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------------ 252
DKYLIATSEQP+CA H + A LPI+Y G STCFR+
Sbjct: 231 ---DKYLIATSEQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQF 287
Query: 253 ---------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEA 283
ED K I Y+VV+IVSGALN AAAKK DLEA
Sbjct: 288 EKIEQFCITSPNDNDSWEMHEEMLKNSEDYYKEIGLPYQVVSIVSGALNDAAAKKYDLEA 347
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFP S FRELVSCSNC D+QSRRL + YGQ K + +FVHMLN+T AT R +C IL
Sbjct: 348 WFPASKTFRELVSCSNCTDFQSRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCIL 407
Query: 344 ETHQTETGVRIPDCLRKFVPAV 365
E Q E GV +P L+ ++ +
Sbjct: 408 ENFQKEDGVEVPKALQPYMGGI 429
>gi|255546678|ref|XP_002514398.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223546495|gb|EEF47994.1| seryl-tRNA synthetase, putative [Ricinus communis]
Length = 447
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/457 (41%), Positives = 254/457 (55%), Gaps = 94/457 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADN----FNKFK 57
+LD++LFR +KG +P+ +R++Q+ RF NV +V ++I D +WRQ +++ DN FNK
Sbjct: 1 MLDINLFREDKGHNPQLIRESQRRRFANVNVVGEIILLDKEWRQRQYELDNLRKDFNKIN 60
Query: 58 NLCSKVIGEKMKAKEPVGDSSTLP------------------------GNHLHPSVPVSN 93
L +K+ A E + D++ GN +H SVPVSN
Sbjct: 61 KLVAKLKIAGEDATEMIKDTNENKRLTAEKEAQVQEAALALNKKLEEVGNLVHDSVPVSN 120
Query: 94 NEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
+E N ++R G+ + K +HVDL+ ++ D++ GA VAGGRG++LKG V L L
Sbjct: 121 DEANNAVIRVWGEKRLEPKLKNHVDLVELLGIADTKKGANVAGGRGFYLKGDGVRLNQAL 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ AL ++GYT L TPFFMRK++M + AQLAQFDEELYKV G+GE
Sbjct: 181 INVALDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGE------------ 228
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------- 252
DKYLIAT+EQP+CA H D W+ + LPIRY G S+CFR+
Sbjct: 229 -DKYLIATAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK 287
Query: 253 -------------------------EDLTK--SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
ED K +I Y+VV IVSGALN AAAKK DLEAWF
Sbjct: 288 VEQFCITSPNGNDSWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEAWF 347
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P S +RELVSCSNC DYQSR+L +RYGQ K + ++VH+LN+T AT R +C ILE
Sbjct: 348 PASNTYRELVSCSNCTDYQSRKLEIRYGQKKNNEQAKQYVHLLNSTLTATERTLCCILEN 407
Query: 346 HQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
+Q E GV IP+ LR Y+ +PF P +
Sbjct: 408 YQKENGVEIPEPLRG-----YMGGKSFLPFQNNPPTE 439
>gi|194701166|gb|ACF84667.1| unknown [Zea mays]
gi|195621762|gb|ACG32711.1| seryl-tRNA synthetase [Zea mays]
Length = 458
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 243/442 (54%), Gaps = 91/442 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFRT+KGG+P+ +R++Q+ RF +VELVD+VI D WR+ + + D + N S
Sbjct: 1 MLDINLFRTDKGGNPDLIRESQRSRFASVELVDEVIALDKAWRERQFELDKIRQELNATS 60
Query: 62 KVIG------------------------------EKMKAKEPVGDSSTLPGNHLHPSVPV 91
K IG E +AK + T GN +H SVPV
Sbjct: 61 KKIGKLKASKQEEEAKKLMESTDEIKKRLAAKEVEVQEAKSTLDAKVTTIGNIVHESVPV 120
Query: 92 SNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
S++E N IVRT G+ V +HVDL M+D V E GA VAGGRG++LK V L +
Sbjct: 121 SDDEANNKIVRTFGEKRVEDNLKNHVDLCRMLDIVALEKGADVAGGRGFYLKDEGVLLNL 180
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ + L+ ++G+ P+ TPFFMRKE M + AQLAQFDEELYKV G GE
Sbjct: 181 ALINFGLAFLRKRGFKPMQTPFFMRKETMAKCAQLAQFDEELYKVTGDGE---------- 230
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------------ 252
DKYLIATSEQP+CA H + A LPI+Y G STCFR+
Sbjct: 231 ---DKYLIATSEQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQF 287
Query: 253 ---------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEA 283
ED K I Y+VV+IVSGALN AAAKK DLEA
Sbjct: 288 EKIEQFCITSPNGNDSWEIHEEMLKNSEDFYKEIGLPYQVVSIVSGALNDAAAKKYDLEA 347
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFP S FRELVSCSNC D+QSRRL + YGQ K + +FVHMLN+T AT R +C IL
Sbjct: 348 WFPASKTFRELVSCSNCTDFQSRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCIL 407
Query: 344 ETHQTETGVRIPDCLRKFVPAV 365
E Q E GV +P L+ ++ +
Sbjct: 408 ENFQKEDGVEVPKALQPYMGGI 429
>gi|242041875|ref|XP_002468332.1| hypothetical protein SORBIDRAFT_01g043930 [Sorghum bicolor]
gi|241922186|gb|EER95330.1| hypothetical protein SORBIDRAFT_01g043930 [Sorghum bicolor]
Length = 458
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 242/442 (54%), Gaps = 91/442 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR +KGG+P+ +R++Q+ RF +VELVD+VI D+ WR + D + N S
Sbjct: 1 MLDINLFRADKGGNPDLIRESQRSRFASVELVDEVIALDMAWRGKQFDLDKIRQELNATS 60
Query: 62 KVIG------------------------------EKMKAKEPVGDSSTLPGNHLHPSVPV 91
K IG E +AK + T GN +H SVPV
Sbjct: 61 KKIGKLKASKQEEEAKKLMESTDEIKKRLAAKEVEVQEAKSTLDAKVTTIGNIVHDSVPV 120
Query: 92 SNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
S++E N IVRT G+ V + +HVDL M+D V E GA VAGGRG++LKG V L
Sbjct: 121 SDDEANNKIVRTFGEKRVEENLKNHVDLCRMLDIVALEKGADVAGGRGFYLKGDGVFLNQ 180
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ + L+ ++G+ P+ TPFFMRKE M + AQLAQFDEELYKV G GE
Sbjct: 181 ALINFGLAFLRKRGFEPMQTPFFMRKETMAKCAQLAQFDEELYKVTGDGE---------- 230
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------------ 252
DKYLIATSEQP+CA H + A LPI+Y G STCFR+
Sbjct: 231 ---DKYLIATSEQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQF 287
Query: 253 ---------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEA 283
ED K I Y+VV+IVSGALN AAAKK DLEA
Sbjct: 288 EKIEQFCITSPNGNDSWEMHEEMLKNSEDFYKEIGLPYQVVSIVSGALNDAAAKKYDLEA 347
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFP S FRELVSCSNC D+QSRRL + YGQ K + +FVHMLN+T AT R +C IL
Sbjct: 348 WFPASKTFRELVSCSNCTDFQSRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCIL 407
Query: 344 ETHQTETGVRIPDCLRKFVPAV 365
E Q E GV +P L+ ++ +
Sbjct: 408 ENFQKEDGVEVPKALQPYMGGI 429
>gi|384250035|gb|EIE23515.1| serine-tRNA ligase [Coccomyxa subellipsoidea C-169]
Length = 449
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 195/457 (42%), Positives = 253/457 (55%), Gaps = 98/457 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR KGG+P+ +R++Q+ RF +V LVDK+I+ D +WR + + N +
Sbjct: 1 MLDVNLFREGKGGNPDLIRESQRRRFADVTLVDKIIDLDKQWRDAVYNMERLKTEFNALN 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG K KAKE + + L GN + SVPVSN
Sbjct: 61 KAIGVKRKAKEDTAELQEKSKGLKADIVAAEENVKAAEKTRDKTIMLIGNLVPDSVPVSN 120
Query: 94 NEDENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
+E +N +V+T G+ E +HVDL+ M+D VD EAG +VAGGRG++LK V L +
Sbjct: 121 DEVDNVVVKTYGEPREEDGLRNHVDLVQMLDIVDLEAGTMVAGGRGFYLKNEGVLLNQAI 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+Q AL + P+ TPFFMR+++M E AQL QFDEELYKV G+G
Sbjct: 181 IQAALHHGYARKCQPVMTPFFMRQDIMAECAQLEQFDEELYKVTGEG------------- 227
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------ 254
DDKYLIATSEQP+CA+HR W E+ LP++Y+G STCFR+E
Sbjct: 228 DDKYLIATSEQPLCAMHRKLWFEESQLPLKYIGYSTCFRKEAGSHGRDTLGIFRIHQFEK 287
Query: 255 ---------------------LTKS--------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
LT + + Y VVNIVSG LN+AAAKK DLEAWF
Sbjct: 288 VEQFFVTSPDNDASWAALEEMLTNAEDFYQALEVPYHVVNIVSGELNNAAAKKYDLEAWF 347
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----KMNEKIEFVHMLNATACATTRVICA 341
P S +RELVSCSNC DYQ+RRL VR K +N K E+VHMLN T AT R +C
Sbjct: 348 PASKKYRELVSCSNCTDYQARRLEVRMRTPKVPGSDLNRK-EYVHMLNCTLSATERTLCC 406
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+LE +QT GVR+P L+KF+P E IPF KT
Sbjct: 407 LLENYQTPDGVRVPKVLQKFMPG----ELDFIPFRKT 439
>gi|218192264|gb|EEC74691.1| hypothetical protein OsI_10395 [Oryza sativa Indica Group]
Length = 445
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 193/443 (43%), Positives = 247/443 (55%), Gaps = 95/443 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFRTEKGGDPE +RK+Q++R +VELVD+VI D +WRQ + + D + N S
Sbjct: 1 MLDINLFRTEKGGDPELIRKSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTS 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K IG K+KAK+ D+S L GN +H SVP
Sbjct: 61 KEIG-KLKAKKE--DASALIQSTEEIKKRLAAKETEVQEAKGTLDAKLVTIGNIVHESVP 117
Query: 91 VSNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
VS++E N IVRT G+ + +HVDL M+D V E G VAGGRGY+LK V L
Sbjct: 118 VSDDEANNLIVRTWGEKRMEGNLKNHVDLCKMLDIVALEKGVDVAGGRGYYLKDEGVLLN 177
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L+ + L+ ++G+ P+ TPFFMRKE M + AQLAQFDEELYK+ G GE
Sbjct: 178 LALINFGLAFLRKRGFKPMQTPFFMRKETMGKCAQLAQFDEELYKLTGDGE--------- 228
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
+KYLIATSEQP+CA H + A LPIRY G STCFR+
Sbjct: 229 ----EKYLIATSEQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQ 284
Query: 253 ----------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLE 282
ED K I Y++V+IVSGALN AAAKK DLE
Sbjct: 285 FEKIEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLE 344
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
AWFP S +RELVSCSNC D+Q+RRL + YGQ K + +FVHMLN+T AT R +C I
Sbjct: 345 AWFPASKTYRELVSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCI 404
Query: 343 LETHQTETGVRIPDCLRKFVPAV 365
LE Q E GV +P L+ ++ +
Sbjct: 405 LENFQKENGVEVPKALQPYMGGI 427
>gi|440790605|gb|ELR11886.1| serine-tRNA ligase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 459
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 198/464 (42%), Positives = 250/464 (53%), Gaps = 97/464 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFR EKGG+PE ++++Q+ RFK VE+VD++I D +WR+ + + D K +
Sbjct: 1 MVLDINLFRKEKGGNPELIKESQRRRFKPVEIVDEIIALDEEWRKLQFQVDEVKKAQRNL 60
Query: 61 SKVIGEKMKAK------------------------------EPVGDSSTLPGNHLHPSVP 90
SK IG KAK E + L GN +H SVP
Sbjct: 61 SKEIGALYKAKKTEEADAMKPKMADLKKAEEDTENACKVIKEQLDKKLNLIGNLVHESVP 120
Query: 91 VSNNEDENGIVRTKGD---TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
VS +E N +V G+ E +++ H +L+ MIDG + + G VAG R YFLKG V
Sbjct: 121 VSKDETHNAVVTEWGEFKFNEAARRHHH-ELLWMIDGYEPDRGVKVAGHRAYFLKGVGVR 179
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L L+ Y ++KGYT L TPFFM KEVM AQL +FDE LY VIG
Sbjct: 180 LNQALIAYGTDFLMKKGYTALATPFFMNKEVMARTAQLEEFDEALYTVIG---------- 229
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ--------------- 252
++ D+KYLIATSEQPI A H + WL LPIRY G S+CFR+
Sbjct: 230 --EKGDEKYLIATSEQPISAFHAEEWLEPKDLPIRYAGTSSCFRKEAGAHGKDTWGIFRV 287
Query: 253 ---------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLE 282
E++ K+ + Y VV IVSG LN+AAAKKLDLE
Sbjct: 288 HQFEKIEQFCLTEPEKSWEEHENMVKTAEAFYQSLELPYHVVAIVSGELNNAAAKKLDLE 347
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
AWFP G FRELVS SNC DYQSR L VR G K+ EK ++VHMLNAT CATTR IC I
Sbjct: 348 AWFPAFGEFRELVSASNCTDYQSRSLEVRCGSRKQGGEK-KYVHMLNATLCATTRTICCI 406
Query: 343 LETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 386
LE +QT GV +P L+ ++ + IPFVK AP EE
Sbjct: 407 LENYQTPEGVAVPKVLQPYLGGLEF-----IPFVKEAPKKHEEA 445
>gi|115451355|ref|NP_001049278.1| Os03g0198400 [Oryza sativa Japonica Group]
gi|108706679|gb|ABF94474.1| Seryl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547749|dbj|BAF11192.1| Os03g0198400 [Oryza sativa Japonica Group]
gi|215736959|dbj|BAG95888.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765322|dbj|BAG87019.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624378|gb|EEE58510.1| hypothetical protein OsJ_09790 [Oryza sativa Japonica Group]
Length = 445
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 193/443 (43%), Positives = 247/443 (55%), Gaps = 95/443 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFRTEKGGDPE +RK+Q++R +VELVD+VI D +WRQ + + D + N S
Sbjct: 1 MLDINLFRTEKGGDPELIRKSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTS 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K IG K+KAK+ D+S L GN +H SVP
Sbjct: 61 KEIG-KLKAKKE--DASALIQSTEEIKKRLAAKETEVQEAKGTLDAKLVTIGNIVHESVP 117
Query: 91 VSNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
VS++E N IVRT G+ + +HVDL M+D V E G VAGGRGY+LK V L
Sbjct: 118 VSDDEANNLIVRTWGEKRMEGNLKNHVDLCKMLDIVALEKGVDVAGGRGYYLKDEGVLLN 177
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L+ + L+ ++G+ P+ TPFFMRKE M + AQLAQFDEELYK+ G GE
Sbjct: 178 LALINFGLAFLRKRGFKPMQTPFFMRKETMGKCAQLAQFDEELYKLTGDGE--------- 228
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
+KYLIATSEQP+CA H + A LPIRY G STCFR+
Sbjct: 229 ----EKYLIATSEQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQ 284
Query: 253 ----------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLE 282
ED K I Y++V+IVSGALN AAAKK DLE
Sbjct: 285 FEKIEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLE 344
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
AWFP S +RELVSCSNC D+Q+RRL + YGQ K + +FVHMLN+T AT R +C I
Sbjct: 345 AWFPASKTYRELVSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCI 404
Query: 343 LETHQTETGVRIPDCLRKFVPAV 365
LE Q E GV +P L+ ++ +
Sbjct: 405 LENFQRENGVEVPKALQPYMGGI 427
>gi|330805610|ref|XP_003290773.1| hypothetical protein DICPUDRAFT_49409 [Dictyostelium purpureum]
gi|325079086|gb|EGC32704.1| hypothetical protein DICPUDRAFT_49409 [Dictyostelium purpureum]
Length = 443
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/454 (42%), Positives = 253/454 (55%), Gaps = 89/454 (19%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ FR +KGG+P+ +R++QK R+ NV+ V +VI+ D ++ +K N
Sbjct: 1 MGLDIVAFRADKGGNPDLIRQSQKARYANVDAVQEVIDLDKTVKETNYKLSQANGEYAKL 60
Query: 61 SKVIGEKMKAKEPVG------------------DSSTLP----------GNHLHPSVPVS 92
+K + K KA E D++ L GN +H SVP+
Sbjct: 61 NKAVAMKKKAGENADELIAQAEALDKDISQLKTDATELELALRKKLKPIGNIVHESVPID 120
Query: 93 NNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
NNED N IV+ G+ + + H +L+ MIDG D E G+ V G R YFLKG V L
Sbjct: 121 NNEDNNQIVKQWGECKTSEGLLHHHELLEMIDGYDPERGSQVGGHRCYFLKGIGVLLNQA 180
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
++ +AL+ +KGYT L TPFFM+KE+M E AQL QFDEELYKV VG +A E++E
Sbjct: 181 IINFALTYLTKKGYTALQTPFFMKKEIMAETAQLEQFDEELYKV------VGGAAGEENE 234
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------ 253
KYLIATSEQPI A HR WL E LP RY+G STCFR+E
Sbjct: 235 ---KYLIATSEQPISAFHRGEWLDEKELPKRYVGYSTCFRKEAGSSGRDTWGIFRVHQFE 291
Query: 254 --------------DLTK-------------SIAYRVVNIVSGALNHAAAKKLDLEAWFP 286
D+ + I YRVVNIVSGALN+AA+KK DLE WFP
Sbjct: 292 KIEQFCVTEPEKSWDMMEEMISNSEQFYQELGIPYRVVNIVSGALNNAASKKYDLEGWFP 351
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G +RELVSCSNC DYQSR L +R G K+ ++ ++VHMLN+T ATTRVIC ILE +
Sbjct: 352 GYNTYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILENY 411
Query: 347 QTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
QTE G+ +P+ LR F+ + IPFVK+ P
Sbjct: 412 QTEGGITVPEPLRPFLGKDF------IPFVKSKP 439
>gi|297812973|ref|XP_002874370.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
gi|297320207|gb|EFH50629.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
Length = 434
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 187/444 (42%), Positives = 254/444 (57%), Gaps = 96/444 (21%)
Query: 3 LDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF-NKFKNL-- 59
+D++LFR EKG +PE +R++Q+ RF NV++VD++I+ D +WRQ + + D+F N+F L
Sbjct: 1 MDINLFREEKGNNPEIIRESQRRRFSNVDVVDEIIQVDKEWRQRQFEVDSFRNEFNKLNK 60
Query: 60 -----------CSKVIGEKMKAKEPVGDS--------STLP------GNHLHPSVPVSNN 94
+++I + K K+ +TL GN +H SVP +
Sbjct: 61 HVAQLKIAKADATEIIQQTEKNKQDATAREVEVREAFATLQAKLLTFGNLVHDSVPFDKD 120
Query: 95 EDENGIVRTKGD----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
E N +++ G+ T K +HVDL+ ++ D++ GA +AGGRGYFLKG V L
Sbjct: 121 EANNLVIKLFGEKRFSTPDLKLKNHVDLVELLGIADTKRGADIAGGRGYFLKGFGVRLNQ 180
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ +AL ++G+TPL PFFMRK+VM + AQLAQFDEELYKV G+G
Sbjct: 181 ALINFALDSLEDRGFTPLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEG----------- 229
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------------ 252
DDK+LIAT+EQP+CA HR+ + + LP RY G STCFR+
Sbjct: 230 --DDKFLIATAEQPLCAYHRNQTIHPSELPKRYAGYSTCFRKEAGSHGRDTLGIFRVHQF 287
Query: 253 ------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
E++ K+ I YRVV++VSGALN AAAKK DLE WF
Sbjct: 288 EKVEQFCITAPNDSWAMLEEMLKNSEEFYQALKIPYRVVSVVSGALNDAAAKKYDLEGWF 347
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P S +RELVSCSNC DYQSRRL +RYGQ K ++ ++VHMLN+T AT R IC ILE
Sbjct: 348 PASETYRELVSCSNCTDYQSRRLDIRYGQNKSKDQTKQYVHMLNSTLTATERTICCILEN 407
Query: 346 HQTETGVRIPDCL------RKFVP 363
+Q E GV IPD L +KF+P
Sbjct: 408 YQREDGVDIPDVLQPYMGGKKFMP 431
>gi|412994153|emb|CCO14664.1| seryl-tRNA synthetase [Bathycoccus prasinos]
Length = 628
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 192/454 (42%), Positives = 244/454 (53%), Gaps = 97/454 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++L R EKGGDP+ V+++QK R+K+VE+VD+ IE D +WR R D N N +
Sbjct: 1 MLDINLLRPEKGGDPDVVKESQKRRYKSVEIVDQCIEKDAQWRSVRFDLDKLNADFNKAN 60
Query: 62 KVIGEKMKAKEPVGDSSTLP------------------------------GNHLHPSVPV 91
K + KMKA E +P GN +H SVPV
Sbjct: 61 KAVALKMKAGEKEEAEKLMPEVKRVDQLRKDTVELEKTLEQETNELLLKIGNIVHDSVPV 120
Query: 92 SNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
+N+E+ N + T G+ + + +HVDL+ M+D D E GA VAGGRGY+LKG V L
Sbjct: 121 NNDEEFNTVHATWGERRMEEDLPNHVDLVGMLDIADLEKGADVAGGRGYYLKGAGVLLNQ 180
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ YALS +G++PL TPFFMRK+ M E AQLA FDE+LYKV G+G
Sbjct: 181 AMINYALSFLAARGHSPLATPFFMRKDRMAECAQLADFDEQLYKVTGEG----------- 229
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK------------- 257
DDKYLIATSEQ C+ R WL E LPIR G STCFR+E +
Sbjct: 230 --DDKYLIATSEQTCCSYLRKLWLNEKDLPIRLSGYSTCFRKEVGSHGRDTLGIFRVHQF 287
Query: 258 ----------------------------------SIAYRVVNIVSGALNHAAAKKLDLEA 283
+I Y VVNIVSG LN AAAKK DLEA
Sbjct: 288 EKVEQFVAVTPEGNASWEEMDRLIGNAEAFYQSLNIPYNVVNIVSGELNDAAAKKYDLEA 347
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE-FVHMLNATACATTRVICAI 342
WFP S RELVSCSNC DYQSRRL +RYG +K EK + +VH+LN+T AT R +C +
Sbjct: 348 WFPSSRTHRELVSCSNCTDYQSRRLEIRYGAPQKGPEKTKSYVHLLNSTLTATERSLCCL 407
Query: 343 LETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 376
LE QT G+ +P LR ++ + IPFV
Sbjct: 408 LENWQTPDGLVVPPALRPWMCGIEF-----IPFV 436
>gi|297812971|ref|XP_002874369.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
gi|297320206|gb|EFH50628.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 180/440 (40%), Positives = 250/440 (56%), Gaps = 92/440 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK-FKNLC 60
+LD++LFR EKG +PE +R++Q+ RF +VE+VD++I+ D +WRQ + + D+F K F L
Sbjct: 1 MLDINLFREEKGNNPEIIRESQRRRFASVEVVDEIIKLDKEWRQRQFEVDSFRKEFNKLN 60
Query: 61 SKVIGEKMKAKEPV----------GDSST-----------------LPGNHLHPSVPVSN 93
+V K+K ++ DS+ GN +H SVP+
Sbjct: 61 KQVAQLKIKKEDATEIIQQTEKNKQDSTAKEAEVREAYAALKAKLETVGNLIHDSVPIDK 120
Query: 94 NEDENGIVRTKGD----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+E N +++ G+ T K +HVDL+ ++ D++ GA +AG RG+FLKG + L
Sbjct: 121 DEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLMLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + L+ ++G+T L PFFMRK+VM + AQLAQFDEELYKV G+G
Sbjct: 181 QALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEG---------- 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E
Sbjct: 231 ---DDKYLIATAEQPLCAYHLDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQ 287
Query: 254 ----------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLE 282
++ K+ + Y++V+IVSGALN AAAKK DLE
Sbjct: 288 FEKIEQFCITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLE 347
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
AWFP S FRELVSCSNC DYQ+RRL +RYGQ K + ++VHMLN+T AT R IC I
Sbjct: 348 AWFPSSETFRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCI 407
Query: 343 LETHQTETGVRIPDCLRKFV 362
LE +Q E GV IP+ L+ F+
Sbjct: 408 LENYQREDGVDIPEVLQPFM 427
>gi|15240939|ref|NP_198099.1| seryl-tRNA synthetase [Arabidopsis thaliana]
gi|2501056|sp|Q39230.1|SYS_ARATH RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|13507571|gb|AAK28648.1|AF360352_1 putative seryl-tRNA synthetase [Arabidopsis thaliana]
gi|1359497|emb|CAA94388.1| seryl-tRNA Synthetase [Arabidopsis thaliana]
gi|15293241|gb|AAK93731.1| putative seryl-tRNA synthetase [Arabidopsis thaliana]
gi|332006309|gb|AED93692.1| seryl-tRNA synthetase [Arabidopsis thaliana]
Length = 451
Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 180/440 (40%), Positives = 248/440 (56%), Gaps = 92/440 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR EKG +PE +R++Q+ RF +VE+VD++I+ D +WRQ + + D+F K N +
Sbjct: 1 MLDINLFREEKGNNPEIIRESQRRRFASVEIVDEIIKLDKEWRQRQFEVDSFRKEFNKLN 60
Query: 62 KVIGEKMKAKEPVG-----------DSSTLP-----------------GNHLHPSVPVSN 93
K + + KE DS+ GN +H SVPV
Sbjct: 61 KQVAQLKIKKEDASEIIQQTEKNKQDSTAKEAEVREAYAALKAKLEQVGNLVHDSVPVDK 120
Query: 94 NEDENGIVRTKGD----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+E N +++ G+ T K +HVDL+ ++ D++ GA +AG RG+FLKG + L
Sbjct: 121 DEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLMLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + L+ ++G+T L PFFMRK+VM + AQLAQFDEELYKV G+G
Sbjct: 181 QALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEG---------- 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E
Sbjct: 231 ---DDKYLIATAEQPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQ 287
Query: 254 ----------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLE 282
++ K+ + Y++V+IVSGALN AAAKK DLE
Sbjct: 288 FEKIEQFCITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLE 347
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
AWFP S FRELVSCSNC DYQ+RRL +RYGQ K + ++VHMLN+T AT R IC I
Sbjct: 348 AWFPSSETFRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCI 407
Query: 343 LETHQTETGVRIPDCLRKFV 362
LE +Q E GV IP+ L+ F+
Sbjct: 408 LENYQREDGVDIPEVLQPFM 427
>gi|449017881|dbj|BAM81283.1| serine--tRNA ligase, cytoplasmic [Cyanidioschyzon merolae strain
10D]
Length = 476
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/470 (40%), Positives = 251/470 (53%), Gaps = 102/470 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ LFR E+GG+PE VR++Q+ RF +V+LVD+VIE D +WRQ + + D + N S
Sbjct: 1 MLDIRLFRAEQGGNPELVRESQRRRFADVKLVDRVIELDERWRQAQFRVDALRRELNESS 60
Query: 62 KVIGEKMK----AKEPVGDSSTLP------------------------GNHLHPSVPVSN 93
K + +K A E + + L GN +H SVPVS
Sbjct: 61 KRVSGLIKSGADASELISSVADLKRSIPAAEREAAALEQERDALLREIGNLVHESVPVSV 120
Query: 94 NEDENGIVRTKG-----DTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+E +N + R G D V+ + SHV+L+ + D E GA VAG RGYFL GP V
Sbjct: 121 DEADNRVERLWGYPELADERVKNAHRSHVELLLALGAADYERGARVAGSRGYFLIGPGVR 180
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L + LVQYAL+ E+G+ + P+FM + M AQL+ FDE+LYKV + P
Sbjct: 181 LNLALVQYALNFLRERGFREMQPPYFMTSDAMARCAQLSDFDEQLYKVTVRSRGAAAGEP 240
Query: 208 EKD------------ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ--- 252
E E D YLIATSEQPICA H D WL ++LP+ Y G STCFR+
Sbjct: 241 ESSGTGGTNATAAAAEDDKYYLIATSEQPICAYHTDEWLDPSTLPLLYAGFSTCFRKEAG 300
Query: 253 ------------------------------------------EDLTKS--IAYRVVNIVS 268
E+ +S I YR+V+IVS
Sbjct: 301 AHGRDQLGIFRVHQFEKIEQFAVTSPLDGASWEMLERLLGNAEEFYQSLGIPYRIVSIVS 360
Query: 269 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
GALN+AA+KK DLE W+P S A+RELVSCSNC DYQSRRLL RYG K + + FVHML
Sbjct: 361 GALNNAASKKYDLEGWYPASKAWRELVSCSNCTDYQSRRLLTRYGMKKGGDREKRFVHML 420
Query: 329 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE--IPFV 376
N+T CATTRVIC I+E +Q E GV +P L+ ++ GE +PFV
Sbjct: 421 NSTLCATTRVICCIVENYQRENGVEVPAVLQPYL-------GGETLLPFV 463
>gi|6094413|sp|O81983.1|SYS_HELAN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|3451411|emb|CAB11470.1| seryl-tRNA synthetase [Helianthus annuus]
Length = 438
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/440 (42%), Positives = 248/440 (56%), Gaps = 95/440 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR EKGG+PE VR++Q+ R +VE+VD++I+ D +WRQ + + + K N +
Sbjct: 1 MLDINLFREEKGGNPEIVRESQRRRGASVEIVDEIIKLDKEWRQRQFELEQLRKDFNRIN 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K + K + GD+S+L GN +H SVP
Sbjct: 61 KEVA---KLRISGGDASSLIKNTEENKDSTAKKQAEVQEARTALYSKLETVGNLVHDSVP 117
Query: 91 VSNNEDENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
VSN+E +N +VRT G+ E +HV+L+ ++ D + GA VAGGRGY+LKG V L
Sbjct: 118 VSNDEADNAVVRTWGERREETNLKNHVELVELLGIADLKKGANVAGGRGYYLKGDGVRLN 177
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + L ++ YT L TPFFMRK++M + AQLAQFDEELYKV G+G
Sbjct: 178 QALINFGLDFLEKRKYTALQTPFFMRKDIMGKCAQLAQFDEELYKVTGEG---------- 227
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED--------------- 254
DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E
Sbjct: 228 ---DDKYLIATAEQPLCAYHIDDWIHPNELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQ 284
Query: 255 --------LTK------------------------SIAYRVVNIVSGALNHAAAKKLDLE 282
LTK + Y+VV+IVSGALN AAAKK DLE
Sbjct: 285 FEKVEQFCLTKPSGNDSWEMHEEMIKNSEEFYQMLKLPYQVVSIVSGALNDAAAKKYDLE 344
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
AWFP S +RELVSCSNC DYQSR+L +R GQ K + ++ H+LN+T AT R +C I
Sbjct: 345 AWFPASKTYRELVSCSNCTDYQSRKLEIRCGQKKGNEQAKQYCHLLNSTLTATERTLCCI 404
Query: 343 LETHQTETGVRIPDCLRKFV 362
LE +QTE GV IP+ L+ F+
Sbjct: 405 LENYQTEKGVAIPEVLQPFM 424
>gi|145509547|ref|XP_001440712.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407940|emb|CAK73315.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/465 (41%), Positives = 254/465 (54%), Gaps = 98/465 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD++L R +KGG+P V++ + RF++ +VDKVI D +WR+ R D NK +
Sbjct: 1 MGLDINLLREDKGGNPNLVKEWCQKRFQDPAIVDKVIALDQEWRKARFNLDQLNKEYGIA 60
Query: 61 SKVIGEKMKA--KEPVGDSSTLP----------------------------GNHLHPSVP 90
+K I EK KA ++P + L GN +H SVP
Sbjct: 61 NKKIAEKKKANKQDPCVEEVELAKTIDLKIKEAQKIEQEQEIVLTQTLNKIGNVVHESVP 120
Query: 91 VSNNEDENGIVRTKG---DTEVRK---KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
VS +E EN I T G D +V + H +++ MIDGVD + G+ +AG R YFLKGP
Sbjct: 121 VSKDEAENRIEVTWGQIPDIQVNSTPGRCHHHEVLFMIDGVDLKRGSKIAGHRAYFLKGP 180
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
+ L LV Y + ++GYTP+ TPFFM+K M E AQL+ FD++LYKV G
Sbjct: 181 GLLLNQALVSYGIQFLNQRGYTPVQTPFFMKKTCMAETAQLSDFDDQLYKVTGN------ 234
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------- 253
P+ ++L YLIATSEQPI A++R WL LPI+Y G STCFR+E
Sbjct: 235 --PDDEDL---YLIATSEQPISAMYRKEWLEPKDLPIKYGGSSTCFRKEAGAYGKDVWGI 289
Query: 254 --------------------------------DLTKS--IAYRVVNIVSGALNHAAAKKL 279
D KS + YRVVNIVSGALN AAAKK
Sbjct: 290 FRVHQFEKIEQFVICSPEESWKFHDEMITAGQDFVKSLELPYRVVNIVSGALNDAAAKKY 349
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLEAWFPG +REL SCSNCLDYQSR L +R+G K ++ ++VHMLNAT CAT R +
Sbjct: 350 DLEAWFPGYKDYRELQSCSNCLDYQSRALEIRFGAKKTDEKEKKYVHMLNATLCATERTL 409
Query: 340 CAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 384
C ILE +QTETGV++P L+ FV + IP+VK P E+
Sbjct: 410 CCILENYQTETGVKVPVVLQPFVGKDF------IPYVKPLPKKED 448
>gi|162460445|ref|NP_001105110.1| seryl-tRNA synthetase1 [Zea mays]
gi|3319776|emb|CAA07600.1| seryl-tRNA synthetase [Zea mays]
Length = 457
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/441 (41%), Positives = 241/441 (54%), Gaps = 90/441 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFRT+KGG+P+ +R++Q+ RF +VELVD+VI D WR+ + + D + +
Sbjct: 1 MLDINLFRTDKGGNPDLIRESQRSRFASVELVDEVIALDKAWRERQFELDKIRQAQRTSK 60
Query: 62 KV---------------------IGEKMKAKE--------PVGDSSTLPGNHLHPSVPVS 92
K+ I +++ AKE + T GN +H SVPVS
Sbjct: 61 KIGKLKASKQEEEAKKLMESTDEIKKRLAAKEVEVQEAKSTLDAKVTTIGNIVHESVPVS 120
Query: 93 NNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
++E N IVRT G+ V +HVDL M+D V E GA VAGGRG++LK V L +
Sbjct: 121 DDEANNKIVRTFGEKRVEDNLKNHVDLCRMLDIVALEKGADVAGGRGFYLKDEGVLLNLA 180
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
L+ + L+ ++G+ P+ TPFFMRKE M + AQLAQFDEELYKV G GE
Sbjct: 181 LINFGLAFLRKRGFKPMQTPFFMRKETMAKCAQLAQFDEELYKVTGDGE----------- 229
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------------- 252
DKYLIATSEQP+CA H + A LPI+Y G STCFR+
Sbjct: 230 --DKYLIATSEQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFE 287
Query: 253 --------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAW 284
ED K I Y+VV+IVSGALN AAAKK DLEAW
Sbjct: 288 KIEQFCITSPNGNDSWEIHEEMLKNSEDFYKEIGLPYQVVSIVSGALNDAAAKKYDLEAW 347
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP S FRELVSCSNC D+ RRL + YGQ K + +FVHMLN+T AT R +C ILE
Sbjct: 348 FPASKTFRELVSCSNCTDFSQRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILE 407
Query: 345 THQTETGVRIPDCLRKFVPAV 365
Q E G R+ L+ ++ +
Sbjct: 408 NFQKEDGRRVKGTLQPYMGGI 428
>gi|300120402|emb|CBK19956.2| unnamed protein product [Blastocystis hominis]
gi|300121988|emb|CBK22562.2| unnamed protein product [Blastocystis hominis]
gi|300122888|emb|CBK23895.2| unnamed protein product [Blastocystis hominis]
Length = 453
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/455 (41%), Positives = 246/455 (54%), Gaps = 92/455 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M +D++L R +GG+P+ VRK+QKDRF +VELVD+VI D KWR DN K K +
Sbjct: 1 MPIDINLLRVSRGGNPDLVRKSQKDRFASVELVDEVIALDDKWRALVGSIDNMKKEKRIL 60
Query: 61 SKVIGEKMK-AKEPVGDSSTLP---------------------------GNHLHPSVPVS 92
S IG+ K K+ +++ + GN L + +
Sbjct: 61 STAIGKARKEGKDAAEEAAKVKEVTAKIEETEKEVEKVRVERDAKLGKIGNILSDTCIID 120
Query: 93 NNEDENGIVRTKGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
NNED NG+V G K Y H +L+ M+DG + E G VAG RGYFLKG AV L
Sbjct: 121 NNEDNNGVVWKWGTPRPMTKDMYCHHELLWMLDGYEPERGTRVAGHRGYFLKGSAVLLNQ 180
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ YA+ ++G+T L TP+FM ++VM VAQL FDE LY V E +
Sbjct: 181 AIIMYAMQWNTKRGFTLLQTPYFMNRDVMAGVAQLEDFDESLYHV------------EGE 228
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
E ++KYLIATSEQPIC H WL E LP++Y G ST FR+E
Sbjct: 229 EGEEKYLIATSEQPICGYHMGEWLDEKELPLKYTGFSTNFRKEAGAHGKDTWGIFRVHQF 288
Query: 255 -------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
++K ++ YRVVNIVSGALN+AAAKK DLE WF
Sbjct: 289 DKVEQFVISKPEESWAMHEYMIQNSREFYESLNLPYRVVNIVSGALNNAAAKKYDLEGWF 348
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
PG A+RELVSCSNC DYQSR + +R G TKK NE+ ++VHMLN+T CA TR +C ILE
Sbjct: 349 PGYEAYRELVSCSNCTDYQSRAMEIRCGATKKKNEEKKYVHMLNSTLCALTRTLCCILEN 408
Query: 346 HQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+QT GV IP+ L+ ++ + +PF + P
Sbjct: 409 YQTSEGVEIPEVLQPWMGGIKF-----LPFKRPLP 438
>gi|66823277|ref|XP_644993.1| seryl-tRNA synthetase [Dictyostelium discoideum AX4]
gi|75009955|sp|Q7KWQ2.1|SYSC_DICDI RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|60473019|gb|EAL70967.1| seryl-tRNA synthetase [Dictyostelium discoideum AX4]
Length = 451
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/454 (41%), Positives = 250/454 (55%), Gaps = 93/454 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ LFR +KGG+P+ +R++QK R+ NV+ V +VI+ D ++ +++ DN N
Sbjct: 1 MGLDIVLFRADKGGNPDLIRQSQKVRYANVDAVQEVIDLDKVVKETKYRLDNTNAEYAKL 60
Query: 61 SKVIGEKMKAKEP----VGDSSTLP------------------------GNHLHPSVPVS 92
+K + K KA E + + L GN +H SVP+
Sbjct: 61 NKSVAMKKKAGESADEIIAQAEELNQSIIKLKAEVSEVELLLRKKLRPIGNIVHESVPID 120
Query: 93 NNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
NNED N I++T G+ + + H +L+ MIDG D E G +V+G R YFLKG V L
Sbjct: 121 NNEDNNQIIKTWGECKTSEGLLHHHELLEMIDGYDPERGTLVSGHRCYFLKGIGVLLNQA 180
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
++ +AL ++G PL TPFFM K+VM + AQL QFD+ELYKV G E
Sbjct: 181 IINFALMHMTKRGSVPLQTPFFMNKDVMAKTAQLEQFDDELYKVTGDNE----------- 229
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------ 253
+KYLIATSEQPI A H+D W+ E LP +Y+G STCFR+E
Sbjct: 230 --EKYLIATSEQPISAFHQDEWIEEKDLPKKYVGYSTCFRKEAGSHGRDTWGIFRVHQFE 287
Query: 254 --------------DLTK-------------SIAYRVVNIVSGALNHAAAKKLDLEAWFP 286
D+ + I YRVVNIVSGALN+AA+KK DLE WFP
Sbjct: 288 KIEQFCITEPEKSWDMMEEMINNSEQFYQELGIPYRVVNIVSGALNNAASKKYDLEGWFP 347
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G +RELVSCSNC DYQSR L +R G K+ ++ ++VHMLN+T ATTRVIC ILE +
Sbjct: 348 GYNQYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILENY 407
Query: 347 QTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
QTE G+ +P LR ++ + IPFVK AP
Sbjct: 408 QTEGGITVPVPLRPYLGKDF------IPFVKAAP 435
>gi|328871735|gb|EGG20105.1| seryl-tRNA synthetase [Dictyostelium fasciculatum]
Length = 452
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 189/457 (41%), Positives = 248/457 (54%), Gaps = 93/457 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ +FR +KGG+P+ +R++Q+ R K VE V ++I+ D + ++ ++ D N
Sbjct: 1 MGLDIVMFRADKGGNPDLIRQSQQKRNKPVEAVQEIIDLDGEVKKAKYATDQANSEYGKI 60
Query: 61 SKVIGEKMKAKEP-------VGDSSTLP------------------------GNHLHPSV 89
+K I K+ E + ++ L GN +H SV
Sbjct: 61 NKDIAALKKSGETGAKIDELIAANTALDAKIQTLKKQSADLEELLRKKLKPIGNIVHESV 120
Query: 90 PVSNNEDENGIVRTKGDTE-VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
PVS ED+N +VRT G+ + +H L+ MIDG D E GA ++G R YFLKGP V L
Sbjct: 121 PVSTTEDDNAVVRTWGECKNTPDLLNHHHLLEMIDGFDMERGASISGHRCYFLKGPGVML 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
++ Y L+ ++ YT L TPFFMRK+VM E AQL QFDEELYKV G GE+
Sbjct: 181 NQAIINYGLAFLAKRQYTALQTPFFMRKDVMAETAQLEQFDEELYKVSGDGEE------- 233
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED-------------- 254
++KYLIATSEQPI A HR WL E LP RY G STCFR+E
Sbjct: 234 ----NEKYLIATSEQPISAFHRGEWLEEKDLPKRYAGYSTCFRKEAGSHGRDTWGIFRVH 289
Query: 255 ---------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEA 283
+TK + Y+VV+IVS ALN+AAAKK DLE
Sbjct: 290 QFEKIEQFVITKPEDSWEMHEQMIKTAEEYYQELGLPYQVVSIVSSALNNAAAKKYDLEG 349
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFPG A+RELVSCSNC DYQ+R L +R G K+ ++ +VHMLN+T ATTRVIC IL
Sbjct: 350 WFPGYNAYRELVSCSNCTDYQARDLEIRCGMKKQGQQQKRYVHMLNSTLAATTRVICCIL 409
Query: 344 ETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
E +QTE G+ +P L+ F+ V IPFVK P
Sbjct: 410 ENYQTEGGINVPTVLQPFMGGVTF-----IPFVKPKP 441
>gi|255557773|ref|XP_002519916.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223540962|gb|EEF42520.1| seryl-tRNA synthetase, putative [Ricinus communis]
Length = 447
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 184/457 (40%), Positives = 246/457 (53%), Gaps = 94/457 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADN----FNKFK 57
+LD++LFR +KG + E + ++Q+ RF NV +VD++I D +WRQ + + DN FNK
Sbjct: 1 MLDINLFREDKGHNSELIWESQRRRFANVNIVDEIILLDKEWRQRQFELDNLRKDFNKIN 60
Query: 58 NLCSKVIGEKMKAKEPVGDSSTLP------------------------GNHLHPSVPVSN 93
+K+ A E + +++ GN +H SVP+SN
Sbjct: 61 KQVAKLKIAGEDATEMINNTNENKRLSAEKEAQVQEAALALNKKLEQVGNLVHDSVPISN 120
Query: 94 NEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
+E N ++R G+ K +HV+L+ + D++ GA VAGGRGY+LKG V L L
Sbjct: 121 DEANNFVIRVWGEKRWEPKLKNHVELVEFLGIADTKKGANVAGGRGYYLKGAGVRLNQAL 180
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ + L ++GYT L TPFFMRK+VM + AQLAQFDEELYKV G+G
Sbjct: 181 INFGLDFLEKRGYTALQTPFFMRKDVMAKCAQLAQFDEELYKVTGEG------------- 227
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF---------------------- 250
DDKYLI T+EQP+CA H D W+ + LPIRY G S+CF
Sbjct: 228 DDKYLIGTAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFCKEAGSHGRDTLGIFRVHQFEK 287
Query: 251 -----------------------RQEDLTK--SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
ED K +I Y+VV IVSGALN AAAKK DLEAWF
Sbjct: 288 VEQFCNTSPNGNDSWAMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEAWF 347
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P S RELVSCSNC DYQSR+L +RYGQ K + ++VH+LN+T AT R +C ILE
Sbjct: 348 PASETCRELVSCSNCTDYQSRKLEIRYGQKKSNEQAKQYVHLLNSTLTATERTLCCILEN 407
Query: 346 HQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
+Q E G+ IP+ LR VY+ +PF A +
Sbjct: 408 YQKENGIEIPEPLR-----VYMGGVSFLPFQNNASTE 439
>gi|145349865|ref|XP_001419347.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579578|gb|ABO97640.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 435
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/453 (41%), Positives = 241/453 (53%), Gaps = 97/453 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+++ R +KGGDPE VR++++ RF VE VD V+ DL WR+ RH D N +
Sbjct: 1 MLDVNMLRPDKGGDPEAVRESERRRFGRVEDVDDVLALDLAWREARHALDEVGGEFNKAN 60
Query: 62 KVIGEKMKAKEPVGDSSTLP------------------------------GNHLHPSVPV 91
K + MKA + + + GN +H SVPV
Sbjct: 61 KEVAMLMKAGKKDEAAPLMAKVKEIDERKKAAAEKEKELEEKTTTALLKIGNIVHDSVPV 120
Query: 92 SNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
SN+E+ N IVRT G+ + +K +HVDLI+M+D D E G VAGGRGY+LKG L
Sbjct: 121 SNDEENNVIVRTWGEKRMEEKLPNHVDLISMLDIADVEQGTEVAGGRGYYLKGAGALLNQ 180
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ YAL+ +G+TPL TPFFMRK+ M E AQLA FDE+LYKV G+G
Sbjct: 181 AVINYALAFLASRGHTPLATPFFMRKDRMAECAQLADFDEQLYKVTGEG----------- 229
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK------------- 257
DDKYLIATSEQ C+ R WL LPIR+ G STCFR+E +
Sbjct: 230 --DDKYLIATSEQTCCSYLRKRWLNTNQLPIRFAGYSTCFRKEVGSHGRDTLGIFRVHQF 287
Query: 258 ----------------------------------SIAYRVVNIVSGALNHAAAKKLDLEA 283
+I Y+VVNIVSG LN AAAKK DLEA
Sbjct: 288 EKVEQFVAVSGEGNASWDEMERLIGNSEAFYQSLNIPYQVVNIVSGELNDAAAKKYDLEA 347
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAI 342
WFP S FRELVSCSNC DYQSRRL +R G KK E K +VH+LN+T AT R +C +
Sbjct: 348 WFPSSRTFRELVSCSNCTDYQSRRLEIREGAPKKGPENKKAYVHLLNSTLTATERTLCCL 407
Query: 343 LETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 375
+E QT G+ +P LR ++ + IPF
Sbjct: 408 IENWQTPEGLVVPPALRPWMNGIEF-----IPF 435
>gi|50555007|ref|XP_504912.1| YALI0F02629p [Yarrowia lipolytica]
gi|49650782|emb|CAG77717.1| YALI0F02629p [Yarrowia lipolytica CLIB122]
Length = 453
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 194/476 (40%), Positives = 246/476 (51%), Gaps = 102/476 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F EKGG+PE +R +QK R VE+VD++I + W + R D NK +N
Sbjct: 1 MLDIIQFLEEKGGNPEAIRVSQKARGDPVEIVDEIIADYKAWTKTRFDLDELNKEQNKIQ 60
Query: 62 KVIGEKMKAKEPVG-----------------------DSS-----TLPGNHLHPSVPVSN 93
K IG K KAKE DS+ GN +H SV VS+
Sbjct: 61 KAIGLKFKAKEDASELLKEKDNVVAKKAELTKQEQEQDSALRAKVNTVGNLVHESVVVSD 120
Query: 94 NEDENGIVRTKG----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N I+RT D V+ K SH +++T +DG D E G + G RGYFLK V L
Sbjct: 121 NEDNNAIIRTFANDGFDPAVKGKLSHHEVLTRLDGYDPERGTKIVGHRGYFLKSYGVFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ Y L ++GY PL P M K+VM AQL+QFDEELYKV+
Sbjct: 181 QALINYGLDFLTKRGYVPLQAPMMMNKDVMARTAQLSQFDEELYKVM------------- 227
Query: 210 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ--------------- 252
D D+KYLIATSEQPI A H + W PE LP RY G STCFR+
Sbjct: 228 DGQDEKYLIATSEQPISAYHANEWFERPEEQLPRRYAGYSTCFRREAGSHGKDAWGIFRV 287
Query: 253 ----------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLE 282
E+ KS+ YRVV+IVSG LN+AAAKK DLE
Sbjct: 288 HQFEKIEQFCITDPEKSWEEFDRMIDASEEFYKSLGLPYRVVSIVSGELNNAAAKKYDLE 347
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
AWFP ++ELVSCSNC DYQSR L +R G K+ + ++VH LN+T CAT R +C I
Sbjct: 348 AWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKKQNEREKKYVHCLNSTLCATERALCCI 407
Query: 343 LETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKK 398
LE +QT+ G+R+P+ LR+F+P GE F+ P E K QK+ KK
Sbjct: 408 LENYQTDDGLRVPEVLRRFIP-------GEPEFI---PYTAELPKNSTSQKQAAKK 453
>gi|145494412|ref|XP_001433200.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400317|emb|CAK65803.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 192/465 (41%), Positives = 249/465 (53%), Gaps = 98/465 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD++L R +KGG+P V++ + RF++ +VDKV+ D +WR+ R D NK +
Sbjct: 1 MGLDINLLREDKGGNPNLVKEWCQKRFQDPAIVDKVVALDQEWRKARFNLDQLNKEYGIA 60
Query: 61 SKVIGEKMKAK------EPVGDSSTLP------------------------GNHLHPSVP 90
+K I EK KA E V + + GN +H SVP
Sbjct: 61 NKKIAEKKKANKQDPCVEEVEQAKAIDLKIKEAQKVEQEQENILTKTLNKIGNLVHESVP 120
Query: 91 VSNNEDENGIVRTKGD------TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
VS +E EN I T G + H +++ MIDGVD + G+ +AG R YFLKGP
Sbjct: 121 VSKDEAENRIEVTWGQIPNIQVNSTPGRCHHHEILFMIDGVDLKRGSKIAGHRAYFLKGP 180
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
+ L LV Y + ++GYTP+ TP+FM+K M E AQL+ FD++LYKV G
Sbjct: 181 GLLLNQALVSYGIQFLNQRGYTPVQTPYFMKKTCMAETAQLSDFDDQLYKVTGN------ 234
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------- 253
+ DE D YLIATSEQPI A++R WL LPI+Y G STCFR+E
Sbjct: 235 ---QDDE--DLYLIATSEQPISAMYRKEWLEAKDLPIKYGGSSTCFRKEAGAHGKDVWGI 289
Query: 254 --------------------------------DLTKS--IAYRVVNIVSGALNHAAAKKL 279
D KS + YRVVNIVSGALN AAAKK
Sbjct: 290 FRVHQFEKIEQFVICPPEESWKFHEEMITAGQDFVKSLELPYRVVNIVSGALNDAAAKKY 349
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLEAWFPG +REL SCSNCLDYQSR L +RYG K ++ ++VHMLNAT CAT R +
Sbjct: 350 DLEAWFPGYKDYRELQSCSNCLDYQSRALEIRYGAKKADEKEKKYVHMLNATLCATERTL 409
Query: 340 CAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 384
C ILE +QTETGV++P L+ +V + IP+VK P E+
Sbjct: 410 CCILENYQTETGVKVPAVLQPYVGKDF------IPYVKPLPKKED 448
>gi|255075441|ref|XP_002501395.1| predicted protein [Micromonas sp. RCC299]
gi|226516659|gb|ACO62653.1| predicted protein [Micromonas sp. RCC299]
Length = 482
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 196/455 (43%), Positives = 241/455 (52%), Gaps = 95/455 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADN----FNKFK 57
+LD++LFRT+KGGDPE VR++Q+ RF VE VD VI D KWR R + D+ FNK
Sbjct: 1 MLDINLFRTDKGGDPEIVRESQRRRFARVEDVDDVIAMDAKWRDARWELDSVNAEFNKAN 60
Query: 58 NLCSKVIGEKMKAKEPVGDSSTLP------------------------GNHLHPSVPVSN 93
SK+ K A E + L GN +H SV VS
Sbjct: 61 KEVSKLKVAKENADEAIAKVKELAARRVELEQQEKDAEEAVNTLLKRIGNIVHDSVVVSQ 120
Query: 94 NEDENGIVRTKG-DTEV--RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
+E+ N IVRT G DT+ K +HVDLI M+D D+E G VAGGRGYFL G V L
Sbjct: 121 DEENNAIVRTFGLDTKRMEEKLPNHVDLIAMLDIADTEHGTDVAGGRGYFLTGAGVLLNQ 180
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ YAL+ +G+TPL TPFFMRK+ M E AQLA FDE+LYKV E D
Sbjct: 181 ALINYALAFLAGRGHTPLGTPFFMRKDRMAECAQLADFDEQLYKV-----------SEGD 229
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK------------- 257
+ +DKYLIATSEQ C+ R W+ LPIR G STCFR+E +
Sbjct: 230 DKEDKYLIATSEQTCCSFLRKRWIQPKELPIRLAGYSTCFRKEAGSHGRDTLGIFRVHQF 289
Query: 258 ----------------------------------SIAYRVVNIVSGALNHAAAKKLDLEA 283
I Y+VVNIVSG LN AAAKK DLEA
Sbjct: 290 EKVEQFVAVSPDGDESWQEMERMIGNSEAFYQSLGIPYQVVNIVSGELNDAAAKKYDLEA 349
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE-FVHMLNATACATTRVICAI 342
WFP S +RELVSCSNC D+QSRRL +R G +K EK + + H+LN+T AT R +C +
Sbjct: 350 WFPSSKTWRELVSCSNCTDFQSRRLEIRCGAAQKGPEKKKSYCHLLNSTLTATERTLCCV 409
Query: 343 LETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
LE QT G +P LR ++ + IPFVK
Sbjct: 410 LENWQTPEGFVVPPALRPWMQGIEF-----IPFVK 439
>gi|28950357|emb|CAD70981.1| probable serine-tRNA ligase, cytosolic [Neurospora crassa]
Length = 465
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 198/471 (42%), Positives = 246/471 (52%), Gaps = 97/471 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F E+GG+PEK+R++Q+ RF VE+VD+VI R+ + A N N
Sbjct: 1 MLDVNDFIAERGGNPEKIRESQRKRFAPVEVVDEVIALWEDHRKTAYSAMQLNAKINEVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K I K KAKE V D GN +H SVPVSN
Sbjct: 61 KQIAPKKKAKEDVSDLLKQKADLEKEKKDLLDSAAEKEKLLKVKVKTIGNLVHDSVPVSN 120
Query: 94 NEDENGIVRTKGDT----EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N + RT E + SH +++ +DG D E G V G RGYFLK V L
Sbjct: 121 NEDNNTVERTWAPEGVAFEKKDVLSHHEVLRKLDGYDPERGVKVVGHRGYFLKKWGVFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
++ Y L E+ YTPL TP M ++ M + AQL+QFDEELYKV GD A
Sbjct: 181 QAIINYGLEFLSEREYTPLQTPQLMLRDQMAKTAQLSQFDEELYKV------TGDQA--- 231
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------D 254
DKYLIATSEQPI A H D WL LP++Y G STCFR+E +
Sbjct: 232 ----DKYLIATSEQPISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHE 287
Query: 255 LTK------------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
TK I YRVV IVSGALN+AAAKKLDLEAW
Sbjct: 288 FTKVEQFCITEPEKSWEMFEHMISNSEAFYQSLGIPYRVVAIVSGALNNAAAKKLDLEAW 347
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G F+ELVSCSNC DYQSR L +R+G K+ + K +VH LN+T ATTR ICAILE
Sbjct: 348 FPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLTATTRTICAILE 407
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEG 395
QT GV++P+ LRK++P G F+ AP +E K+ K K+G
Sbjct: 408 NFQTPEGVKVPEPLRKYLP-------GAPEFIPFAPEPVKEVKEGKSGKKG 451
>gi|367024667|ref|XP_003661618.1| hypothetical protein MYCTH_2301210 [Myceliophthora thermophila ATCC
42464]
gi|347008886|gb|AEO56373.1| hypothetical protein MYCTH_2301210 [Myceliophthora thermophila ATCC
42464]
Length = 452
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 197/453 (43%), Positives = 241/453 (53%), Gaps = 94/453 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F E+GG+P+K+R++Q+ R+ VE+VD+VI R+ + A N N
Sbjct: 1 MLDVNDFIVERGGNPDKIRESQRKRYAPVEVVDEVIAMWDDHRRTAYAATQLNARINEVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG K KAKE V D GN +H SVPVS+
Sbjct: 61 KQIGPKKKAKEDVTDLLKQKADFEKEKKDLLALAAEKEKALKAKVKTIGNIVHESVPVSD 120
Query: 94 NEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N + RT +G T E R SH +++ +DG D E G V G RGYFL+ V L
Sbjct: 121 NEDNNTVERTWAPEGVTFEKRNVLSHHEVLEKLDGYDPERGVKVVGHRGYFLRRWGVFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ Y L E+GY PL TP M K+ M + AQL+QFDEELYKV GD A
Sbjct: 181 QALINYGLEFLNERGYIPLQTPQLMLKDQMAKTAQLSQFDEELYKV------TGDQA--- 231
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------D 254
DKYLIATSEQPI A H D WL LP++Y G S CFR+E +
Sbjct: 232 ----DKYLIATSEQPISAFHSDEWLQPKQLPLKYAGYSNCFRKEAGAHGKDVWGIFRVHE 287
Query: 255 LTK------------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
TK I YRVV IVSGALN+AAAKKLDLEAW
Sbjct: 288 FTKVEQFCITDPEKSWEMFESMISTSEEFYKSLGIPYRVVAIVSGALNNAAAKKLDLEAW 347
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G F+ELVSCSNC DYQSR L +R+G K+ + K +VH LN+T ATTR ICAILE
Sbjct: 348 FPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLTATTRTICAILE 407
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
QTE GVRIP+ LRK++P IPF K
Sbjct: 408 NFQTEDGVRIPEPLRKYLPGA----PDFIPFAK 436
>gi|308806914|ref|XP_003080768.1| SYS_HELAN Seryl-tRNA synthetase (ISS) [Ostreococcus tauri]
gi|116059229|emb|CAL54936.1| SYS_HELAN Seryl-tRNA synthetase (ISS) [Ostreococcus tauri]
Length = 624
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 188/459 (40%), Positives = 244/459 (53%), Gaps = 101/459 (22%)
Query: 2 VLDLDLFRTEKGGDPEK----VRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFK 57
+LD++L R +KGGDP + VR++++ R++ E VD V+ DL+WR RH+ D
Sbjct: 1 MLDVNLLRPDKGGDPVRSDDVVRESERRRYRKPEGVDDVLTLDLEWRDARHELDRIGGEF 60
Query: 58 NLCSKVIGEKMKA---------------------------KEPVGDSSTLP---GNHLHP 87
N +K + MKA KE +T GN +H
Sbjct: 61 NKANKEVALLMKAGKKDEAAPLMEIVKEIDERRKACAEREKEAEAKMTTALLKLGNIVHD 120
Query: 88 SVPVSNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
SVP+ +NED N + R G+ + + +HVDLI M+D D+E G VAGGRGY+LKG
Sbjct: 121 SVPIDDNEDNNKVERVWGEKRMEENLPNHVDLIAMLDIADTEQGTEVAGGRGYYLKGAGA 180
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ YAL+ +G+TPL TPFFMR++ M E AQLA FDE+LYKV G+GE
Sbjct: 181 LLNQALINYALAFLSSRGHTPLATPFFMRQDRMAECAQLADFDEQLYKVTGEGE------ 234
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK--------- 257
DKYLIATSEQ C+ R WL LPIR G STCFR+E +
Sbjct: 235 -------DKYLIATSEQTCCSYLRKRWLNTNQLPIRLAGYSTCFRKEVGSHGRDTLGIFR 287
Query: 258 --------------------------------------SIAYRVVNIVSGALNHAAAKKL 279
+I Y+VVNIVSGALN AAAKK
Sbjct: 288 VHQFEKVEQFVAVSGEGDASWKEMDRMIGNSEAFYQSLNIPYQVVNIVSGALNDAAAKKF 347
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE-FVHMLNATACATTRV 338
DLEAWFP S FRELVSCSNCLDYQSRRL +R G KK EK++ +VH+LN+T AT R
Sbjct: 348 DLEAWFPSSRTFRELVSCSNCLDYQSRRLEIREGAPKKGPEKVKAYVHLLNSTLTATERT 407
Query: 339 ICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
+C ++E QT G+ +P LR ++ + IPFV+
Sbjct: 408 LCCVIENWQTPEGLVVPPALRPWMNGIEF-----IPFVR 441
>gi|281206264|gb|EFA80453.1| seryl-tRNA synthetase [Polysphondylium pallidum PN500]
Length = 454
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 189/458 (41%), Positives = 248/458 (54%), Gaps = 92/458 (20%)
Query: 1 MVLDLDLFRT-EKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
M LD+ +FR +KGG+P+ +R +Q+ RFK VE V VI+ D+K R +++ D N
Sbjct: 8 MGLDIVMFRAPDKGGNPDLIRLSQERRFKPVETVQTVIDLDMKLRDAKYRLDQTNAEYTK 67
Query: 60 CSKVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPS 88
+K + K KA E + L GN +H S
Sbjct: 68 VNKELAIKKKAGESGEEVDKLVARAAEIDKNIVAYKLECAQAEDELKKAIKPIGNIVHES 127
Query: 89 VPVSNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
VPVSNNED N +VRT G+ + +K H +L+ MIDG D G V+G R YFLKG V
Sbjct: 128 VPVSNNEDNNQVVRTWGEPKTQKDLLHHHELLEMIDGYDLVRGTNVSGHRCYFLKGVGVE 187
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L + ++ Y L+ ++ YT L TPFFMRKE+M E AQL QFDEELYK++G +
Sbjct: 188 LNLAIINYGLAFLKKRSYTHLQTPFFMRKEIMAETAQLEQFDEELYKIVGGAQ------- 240
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------- 254
E ++KYLIATSEQPI + HR W+ E LP Y G STCFR+E
Sbjct: 241 --GEENEKYLIATSEQPISSYHRGEWIEEKDLPKMYSGYSTCFRKEAGAHGRDVWGIFRV 298
Query: 255 ----------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLE 282
+TK + Y+V++IVSGALN+AAAKK DLE
Sbjct: 299 HQFEKIEQFVITKPEDSWAMHEQMIATAEAFYQELGLPYQVISIVSGALNNAAAKKYDLE 358
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
WFPG +RELVSCSNC DYQSR L +R G K+ ++ ++VHMLN+T ATTRVIC I
Sbjct: 359 GWFPGYNQYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCI 418
Query: 343 LETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
LE +QTE G+ +P L+ ++ V IPFVK P
Sbjct: 419 LENYQTEGGINVPKVLQPYMGGVEF-----IPFVKPKP 451
>gi|290990879|ref|XP_002678063.1| seryl-tRNA synthetase [Naegleria gruberi]
gi|284091674|gb|EFC45319.1| seryl-tRNA synthetase [Naegleria gruberi]
Length = 474
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 191/485 (39%), Positives = 247/485 (50%), Gaps = 137/485 (28%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++L R K G+PE VR++Q+ R K+V LVDKVIE D +WR+ + + N+ S
Sbjct: 1 MLDINLLREYKNGNPEIVRESQRRRHKDVALVDKVIELDAEWRKLTGEVNGIKNLGNIVS 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHL----- 85
K +G++MKAK+P+GD +P NH+
Sbjct: 61 KEVGQRMKAKQPLGDDIEIPQEILATVDKNFTKETLESVFPQLNTNQLKKLSNHITEVHV 120
Query: 86 -HPSVPVSNNEDE------------------------NGIVRTKG------DTEVRKKYS 114
SN E E NGIVR G D K
Sbjct: 121 KQADTDASNKEKERDEVLLQLGNLVHETVVVSDNEDNNGIVRLVGNPRPKVDDSGFKCLK 180
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFM 174
H+D++ + + +E G V GGRGYFL G V L + L YA+ EKG+ P+YTPFFM
Sbjct: 181 HIDIMRKLGCLATEEGTQVGGGRGYFLMGDLVRLNLALQNYAIQFLTEKGFCPMYTPFFM 240
Query: 175 RKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL 234
K+ M+ VAQL+QFDEELY V G+GE DKYLIATSEQPI A H D
Sbjct: 241 TKDQMKRVAQLSQFDEELYTVSGEGE-------------DKYLIATSEQPIAAFHLDKRF 287
Query: 235 PEASLPIRYLGVSTCFRQ--------------------------------------EDL- 255
E+ LP++Y G+STCFR+ ED+
Sbjct: 288 DESELPLKYCGMSTCFRKEVGAHGKDTLGIFRVHQFEKIEQFVVTSPKDNKSWEMFEDMI 347
Query: 256 --------TKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGS---GAFRELVSCSNCLDYQ 304
+ ++YRVVNIVSGALN+AAAKKLDLEAWFPG+ +RELVSCSNC DYQ
Sbjct: 348 GNSEAFYQSLGLSYRVVNIVSGALNNAAAKKLDLEAWFPGAEEGNEYRELVSCSNCTDYQ 407
Query: 305 SRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLR----- 359
+RRL VRYG+ + EF HMLN+T AT+R IC I+E +QT GV IP+ L+
Sbjct: 408 ARRLNVRYGKAATKGDA-EFCHMLNSTLSATSRTICCIVENYQTPEGVNIPEVLQPYMGG 466
Query: 360 -KFVP 363
KF+P
Sbjct: 467 TKFIP 471
>gi|328711565|ref|XP_003244573.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like, partial
[Acyrthosiphon pisum]
Length = 232
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/236 (66%), Positives = 173/236 (73%), Gaps = 54/236 (22%)
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------- 253
DDKYLIATSEQPI A+HRD WLPEAS PIRYLGVSTCFRQE
Sbjct: 1 DDKYLIATSEQPIAALHRDQWLPEASFPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 60
Query: 254 ------------------------------DLTKSIAYRVVNIVSGALNHAAAKKLDLEA 283
DL IAYRVVNIVSGALNHAAAKKLDLEA
Sbjct: 61 VEQFVLTSPFDNQSWILFDEMINNSRQFYDDL--GIAYRVVNIVSGALNHAAAKKLDLEA 118
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEK+++VHMLNATACATTRVICAIL
Sbjct: 119 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKVDYVHMLNATACATTRVICAIL 178
Query: 344 ETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
ET+QTETG+++P+ L+K++P Y + EIPFVK+APIDEE+TKKQKKQKEGMK K
Sbjct: 179 ETYQTETGIKVPEILKKYLPTRYQD---EIPFVKSAPIDEEDTKKQKKQKEGMKNK 231
>gi|340959783|gb|EGS20964.1| hypothetical protein CTHT_0028030 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 439
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/460 (41%), Positives = 246/460 (53%), Gaps = 92/460 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F E+GGDPEK+R++Q+ R+ VE+VD+VI R+ + A N N
Sbjct: 1 MLDINDFIVERGGDPEKIRESQRKRYAPVEIVDEVIAMWEDHRKTAYAATQINAKINEAK 60
Query: 62 KVIGEKMKAK------------------EPVGDSSTLPGNHLHPSVPVSNNEDENGIVRT 103
+ + + +K K + + GN +H SVPVS+NED N + RT
Sbjct: 61 EDVTDLLKQKADLEKEKKDLLASAAEKEKALKAKVRTIGNIVHESVPVSDNEDNNRVERT 120
Query: 104 ---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSK 159
G T E R SH +++ +DG D + G V G RGYFL+ V L L+ Y L
Sbjct: 121 WAPDGVTFEKRNVLSHHEVLAKLDGYDPDRGVKVVGHRGYFLRKWGVFLNQALINYGLEF 180
Query: 160 WIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIA 219
+GY PL+TP M KE M + AQL+QFDEELYKV G + +KYLIA
Sbjct: 181 LYNRGYIPLHTPQLMLKEQMAKTAQLSQFDEELYKVTG-------------DQTEKYLIA 227
Query: 220 TSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------DLTK------- 257
TSEQPI A H D WL LP++Y G STCFR+E + TK
Sbjct: 228 TSEQPISAYHADEWLQPKQLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKVEQFCIT 287
Query: 258 -----------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFREL 294
I YRVV IVSGALN+AA+KKLDLEAWFP G F+EL
Sbjct: 288 DPEKSWEMFESMISTSEEFYQSLGIPYRVVAIVSGALNNAASKKLDLEAWFPHQGEFKEL 347
Query: 295 VSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRI 354
VSCSNC DYQSR L +R+G K+ + K +VH LN+T ATTR ICAILE QTE GV+I
Sbjct: 348 VSCSNCTDYQSRDLEIRFGIKKQTDVKKTYVHCLNSTLTATTRTICAILENFQTEDGVKI 407
Query: 355 PDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKE 394
P+ LRK++P IPF TAP +KK+KE
Sbjct: 408 PEPLRKYLPGA----PDFIPFANTAP--------EKKEKE 435
>gi|358377445|gb|EHK15129.1| hypothetical protein TRIVIDRAFT_78222 [Trichoderma virens Gv29-8]
Length = 458
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 193/466 (41%), Positives = 247/466 (53%), Gaps = 95/466 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F E+GG+PE +R++Q+ RF NVE+VD++I R+ ++ A N N
Sbjct: 1 MLDVNDFIAERGGNPEIIRESQRRRFANVEIVDEIIALFEDHRRTQYSATQLNGKINDVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K I K KAKE D GN +H SVPVSN
Sbjct: 61 KQIATKKKAKENADDLLKQKIELEKEKKALIESAAEKDVLLKAKVRSVGNLVHDSVPVSN 120
Query: 94 NEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N + RT +G T E R SH +++ +DG D + G V G RGYFL+ V L
Sbjct: 121 NEDNNAVQRTWAPEGVTVEKRPVLSHHEVLLRLDGYDPDRGVKVVGHRGYFLRQWGVFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
LV Y L +KGYT L P FM K+ M + AQL FDE+LYKV+ GDS
Sbjct: 181 QALVNYGLEFLSQKGYTALQAPQFMLKDYMAKTAQLDDFDEQLYKVVD-----GDSK--- 232
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
+DKYLIATSEQPI A H D WL LPI+Y G STC+R+E
Sbjct: 233 ---NDKYLIATSEQPISAFHADEWLQPKDLPIKYAGYSTCYRREAGSHGRDAWGIYRVHQ 289
Query: 254 ----------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDLEAW 284
D KS + Y+VV IVSGALN AA+KKLDLEAW
Sbjct: 290 FEKIEQFLLSDPEKSWEAFESMIAASEEFYQSLGLPYQVVAIVSGALNDAASKKLDLEAW 349
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQSR L +R G + + K ++VH+LN+T CATTR +C +LE
Sbjct: 350 FPYQGEYKELVSCSNCTDYQSRALEIRCGTKAQTDIKKKYVHLLNSTLCATTRTLCCVLE 409
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
+QTE G+R+P+ LRK++P IPF K P +ET QK
Sbjct: 410 NYQTEDGLRVPEVLRKYLPGA----PDFIPFAKELP---KETPAQK 448
>gi|340516135|gb|EGR46385.1| hypothetical protein TRIREDRAFT_123180 [Trichoderma reesei QM6a]
Length = 458
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 193/473 (40%), Positives = 253/473 (53%), Gaps = 92/473 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F E+GG+PEK+R++Q+ RF NVE+VD++I R+ ++ A N N
Sbjct: 1 MLDVNDFIAERGGNPEKIRESQRRRFANVEIVDEIIALWDDHRRTQYSATQMNTKINEVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------SSTLP------GNHLHPSVPVSN 93
K I K KAKE D + L GN +H SVPVSN
Sbjct: 61 KQIATKKKAKENADDLLKEKIELEKQKKALIESAAEKDALLKVKVKSVGNLVHDSVPVSN 120
Query: 94 NEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N + RT +G T E R SH +++ +DG D + G V G RGYFL+ V L
Sbjct: 121 NEDNNAVQRTWAPEGVTVEKRPVLSHHEVLLRLDGYDPDRGVKVVGHRGYFLRQWGVFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
LV Y L ++GYT L P FM K+ M + AQL FDE+LYKV+ GDS
Sbjct: 181 QALVNYGLEFLSQRGYTALQAPQFMLKDYMAKTAQLDDFDEQLYKVVD-----GDSK--- 232
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
+DKYLIATSEQPI A H D WL LPI+Y G STC+R+E
Sbjct: 233 ---NDKYLIATSEQPISAFHADEWLQPKELPIKYAGYSTCYRREAGSHGRDAWGVYRVHQ 289
Query: 254 ----------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDLEAW 284
D KS + Y+VV IVSGALN AA+KKLDLEAW
Sbjct: 290 FEKIEQFLLTDPEKSWEAFDDMIAVSEEFYKSLGLPYQVVAIVSGALNDAASKKLDLEAW 349
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQSR L +R G + + K ++VH LN+T CATTR +C +LE
Sbjct: 350 FPFQGEYKELVSCSNCTDYQSRALEIRCGTKTQTDIKKKYVHCLNSTLCATTRTLCCVLE 409
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMK 397
+QTE G+R+P+ LRK++P IPF K P + +K ++K+ +K
Sbjct: 410 NYQTEDGLRVPEVLRKYLPG----NPEFIPFAKELPKEAPASKALPQRKKEVK 458
>gi|119182668|ref|XP_001242456.1| hypothetical protein CIMG_06352 [Coccidioides immitis RS]
Length = 465
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/453 (39%), Positives = 242/453 (53%), Gaps = 89/453 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ ++GGDP+KV+++Q+ RF + ELVD+VI R+ R++A N
Sbjct: 1 MLDIADLIADRGGDPKKVKESQRRRFASEELVDEVISLYEDARRTRYEASQIGSKINALQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D+S L GN++H SVP
Sbjct: 61 KEIGMKKKNKE---DASELLAQKAKLEQDKKAQEDLAVEKEKLRDRKLKTIGNYVHDSVP 117
Query: 91 VSNNEDENGIVRT----KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
+SNNED+N I++T E R SH +++T +DG D E G + G RG+ L G +
Sbjct: 118 ISNNEDDNAIIKTWAPEGAKVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGFCLTGYGL 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L + LV Y L KGY P PFFM ++ M + AQL QFDEELYKV
Sbjct: 178 FLNLALVNYGLEFLFNKGYKPNQPPFFMLRDYMAKTAQLEQFDEELYKV----------T 227
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------ 254
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E
Sbjct: 228 ENEDKSTDKYLIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEAGSHGKDAWGIFQ 287
Query: 255 ---LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
LTK + Y++V+IVSGALN+AA+KK DLEAWFP G
Sbjct: 288 QFILTKPEESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALNNAASKKWDLEAWFPFQG 347
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
++ELVSCSNC DYQSR L +R+G K + K +VH LNAT CAT R +C ILE +Q E
Sbjct: 348 EYKELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATLCATERALCCILENYQQE 407
Query: 350 TGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
G+ +P+ LRK++P + +P+ K P D
Sbjct: 408 DGIIVPEVLRKYIPG----QPEFLPYTKELPKD 436
>gi|50426035|ref|XP_461614.1| DEHA2G01694p [Debaryomyces hansenii CBS767]
gi|49657284|emb|CAG90061.1| DEHA2G01694p [Debaryomyces hansenii CBS767]
Length = 460
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/477 (39%), Positives = 243/477 (50%), Gaps = 104/477 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+PEK++++QK R ++E+VD++I + W + R D NK N
Sbjct: 1 MLDINAFLVEKGGEPEKIKESQKKRGDSIEIVDEIIADYKDWTKIRFDLDALNKELNALQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG+K KAKE GD GN +H SV S
Sbjct: 61 KQIGQKFKAKEDAGDLLAQKDKLVADKKSFIEQEQKADADLRNKVNQVGNLVHKSVVESQ 120
Query: 94 NEDENGIVRT------------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+ED N +VRT T K SH +++ +DG D E G + G RGYFL
Sbjct: 121 DEDNNELVRTWKPESLAEIGSIASCTGAEAKLSHHEILLRLDGYDPERGVRIVGHRGYFL 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y LS + YTPL P M KEVM + AQL+QFDEELYKV+
Sbjct: 181 RNYGVFLNQALINYGLSFLAKNDYTPLQAPVMMNKEVMAKTAQLSQFDEELYKVMD---- 236
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ------- 252
GD D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+
Sbjct: 237 -GD--------DEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGSHGK 287
Query: 253 ------------------------------------EDLTKSIA--YRVVNIVSGALNHA 274
E+ KS+ YRVV IVSG LN+A
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGLSEEFYKSLGLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ + ++VH LN+T A
Sbjct: 348 AAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
T R +C ILE +QTE G+ IP+ LR+++P E IPFVK P + KK KK
Sbjct: 408 TQRALCCILENYQTEDGLVIPEVLRRYIPG----EPEFIPFVKELPKNSTSNKKNKK 460
>gi|407926016|gb|EKG18987.1| hypothetical protein MPH_03677 [Macrophomina phaseolina MS6]
Length = 477
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/463 (39%), Positives = 248/463 (53%), Gaps = 90/463 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F E+GGDPEK+R++Q+ R VE+VD++I R+ +++A + N
Sbjct: 1 MLDIQDFIKERGGDPEKIRESQRKRHAPVEIVDEIIAMFEDHRKTQYEATQISSQINATQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG+K K KE D GN++HPSVPVSN
Sbjct: 61 KEIGQKKKNKENADDLLKQKEELTNKKKAQEDLAAEKLKALNAKVKTVGNYVHPSVPVSN 120
Query: 94 NEDENGIVRT---KGDTEVRKK-YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+E+ N ++RT +G T +K+ SH +++ + G D E G V G RGY L G + L
Sbjct: 121 DEENNEVIRTWVPEGVTVEKKECLSHHEVLYRLGGYDPERGVKVVGHRGYCLTGMGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV Y L KGY P PF M ++ M + AQL QFDEELYKV + E
Sbjct: 181 LALVNYGLEFLYNKGYQPNAPPFMMLRDQMAKTAQLEQFDEELYKV---------TEDEN 231
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED--------------- 254
++ DKYLIATSEQP+ A+H + WL A LPI+Y G STCFR+E
Sbjct: 232 NKSTDKYLIATSEQPLSALHSEEWLKPAELPIKYAGYSTCFRKEAGSHGRDAWGIFRVHQ 291
Query: 255 --------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+TK ++ Y+VV IVSGALN+AA+KK DLEAW
Sbjct: 292 FEKIEQFLITKPDESWAAFDSMIETSEEFYKSLNLPYQVVAIVSGALNNAASKKFDLEAW 351
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +RYG K+ + E+VH LN+T AT R +C ILE
Sbjct: 352 FPFQGEYKELVSCSNCTDYQTRELEIRYGTKKQTAARKEYVHALNSTLAATERCLCCILE 411
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 387
+QTE G+R+P+ LRK++P + +PFV+ P D K
Sbjct: 412 NYQTEDGLRVPEVLRKYIPG----QPEFLPFVRELPKDTTSAK 450
>gi|358400420|gb|EHK49751.1| hypothetical protein TRIATDRAFT_297642 [Trichoderma atroviride IMI
206040]
Length = 455
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 194/467 (41%), Positives = 251/467 (53%), Gaps = 97/467 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F TE+GG+PE +R++Q+ RF NVE+VD+VI R+ ++ A N
Sbjct: 1 MLDVNDFITERGGNPELIRESQRRRFANVEIVDEVIALFEDHRKTQYSASQIKGKINDVQ 60
Query: 62 KVIGEKMKAKEPVGD---------------SSTLP-------------GNHLHPSVPVSN 93
K I K KAKE D S + GN +H SVPVS
Sbjct: 61 KQIATKKKAKENADDLLQEKIALQKEEKALSESAAEKDVLLKAKVKSIGNLVHNSVPVSK 120
Query: 94 NEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED+N + RT +G T E R SH +++ +DG D++ G V G RGYFL+ V L
Sbjct: 121 NEDDNAVQRTWAPEGVTVEKRPVLSHHEVLLRLDGYDADRGVKVVGHRGYFLRQWGVFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
LV Y L ++GY PL P FM K+ M + AQL FDE+LYKV+ GDS
Sbjct: 181 QALVNYGLEFLTQRGYCPLQAPQFMLKDYMAKTAQLDDFDEQLYKVVD-----GDSK--- 232
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
+DKYLIATSEQPI A H D WL LPI+Y G STC+R+
Sbjct: 233 ---NDKYLIATSEQPISAFHADEWLQPKELPIKYAGYSTCYRREAGSHGRDAWGIYRVHQ 289
Query: 253 --------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAW 284
E+ KS+ Y+VV IVSGALN AA+KKLDLEAW
Sbjct: 290 FEKIEQFLLTDPEKSWEAFDDMIAVSEEFYKSLGLPYQVVAIVSGALNDAASKKLDLEAW 349
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQSR L +R G + + K ++VH LN+T CATTR +C +LE
Sbjct: 350 FPFQGEYKELVSCSNCTDYQSRALEIRCGTKTQTDIKKKYVHCLNSTLCATTRTLCCVLE 409
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQK 390
+QTE G+R+P+ LRK++P A E IPF K P +ET QK
Sbjct: 410 NYQTEDGLRVPEVLRKYLPG-----APEFIPFSKELP---KETSSQK 448
>gi|403217053|emb|CCK71548.1| hypothetical protein KNAG_0H01350 [Kazachstania naganishii CBS
8797]
Length = 458
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 192/475 (40%), Positives = 246/475 (51%), Gaps = 104/475 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+PE +R++QK R +VELVD++I + W + R + D NK N
Sbjct: 1 MLDINSFIEEKGGNPELIRQSQKARGDSVELVDEIIADYKDWVKTRFELDELNKKLNKLQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG K K+KE + L GN +HPSV +SN
Sbjct: 61 KEIGLKFKSKEDASELLAEKEKLTNEKKELTDKEQAEDQGLKKKVFLVGNIVHPSVVISN 120
Query: 94 NEDENGIVRT---KGDTEV---------RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E+ N +VRT G EV K SH +++ +DG D E G ++G RGYFL
Sbjct: 121 DEENNELVRTWKPSGLEEVGPIASVTGAPAKLSHHEILLRLDGYDPERGVKISGHRGYFL 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y L KGY PL P M KEVM + AQL+QFDEELYKV+
Sbjct: 181 RNCGVFLNQALINYGLHFLTAKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVMD---- 236
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ------- 252
GD D+KYLIATSEQPI A H + W P+ LPIRY G S+CFR+
Sbjct: 237 -GD--------DEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYAGFSSCFRREAGSHGK 287
Query: 253 --------------------------EDLTKSIA------------YRVVNIVSGALNHA 274
E+ K IA YRVV IVSG LN+A
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEPEKSWEEFDKMIANSEEFYQALKLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T A
Sbjct: 348 AAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKLSDREKKYVHCLNSTLSA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T R +C ILE +QTE G+ IP+ LRKF+P E IP+ K P + KK+
Sbjct: 408 TERALCCILENYQTEEGLVIPEVLRKFIPG----EPEFIPYAKELPKNSTSNKKK 458
>gi|50292585|ref|XP_448725.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528037|emb|CAG61688.1| unnamed protein product [Candida glabrata]
Length = 458
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 193/479 (40%), Positives = 251/479 (52%), Gaps = 112/479 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+PE +R++QK R+ +VELVD++I + W + R + D NK N
Sbjct: 1 MLDINQFIEEKGGNPELIRQSQKARYASVELVDEIIADYKDWVKTRFELDELNKKLNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K KAKE D+S L GN +HPSV
Sbjct: 61 KDIGMKFKAKE---DASELLAEKDKLSEEKKQLIEKEQKEDKDLRQKVNQIGNIVHPSVV 117
Query: 91 VSNNEDENGIVRT---KGDTEV---------RKKYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSN+E+ N +VRT +G +V SH +++ +DG D E G ++G RG
Sbjct: 118 VSNDEENNELVRTWKPEGLADVGPVASVTGKPAALSHHEILLRLDGYDPERGVKISGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YF + V L L+ Y L KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 178 YFFRNYGVFLNQALINYGLHFLASKGYIPLQAPVMMNKEVMAKTAQLSQFDEELYKVI-- 235
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
D D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+
Sbjct: 236 -----------DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGS 284
Query: 253 -----------------------------EDLTKSIA------------YRVVNIVSGAL 271
E+ + IA YRVV IVSG L
Sbjct: 285 HGKDAWGVFRVHAFEKIEQFCITEPEKSWEEFDRMIANSEEFYQSLKLPYRVVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEK-IEFVHMLNA 330
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G KKMN++ ++VH LN+
Sbjct: 345 NNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRSG-IKKMNDREKKYVHCLNS 403
Query: 331 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T AT R +C +LE +QTE G+ +P+ LRK++P E +PFVK P + KK+
Sbjct: 404 TLAATQRALCCVLENYQTEDGLIVPEVLRKYIPG----EPEFLPFVKELPKNSTSNKKK 458
>gi|406602092|emb|CCH46312.1| seryl-tRNA synthetase [Wickerhamomyces ciferrii]
Length = 458
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 195/479 (40%), Positives = 252/479 (52%), Gaps = 112/479 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F EKGG+PE +RK+Q RF VE+VD++I + +W + R + D NK +N
Sbjct: 1 MLDITQFIEEKGGNPEAIRKSQAARFAPVEIVDEIIADYKEWTRIRFELDAANKEQNKVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K KAKE D+S L GN +H SV
Sbjct: 61 KEIGLKFKAKE---DASELLKKKDEIAEQKKALVQKEQEADLALKAKVNTVGNLVHESVV 117
Query: 91 VSNNEDENGIVRT---KGDTEVRK---------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSNNED N + T +G E+ K K SH +++ +DG D E GA + G RG
Sbjct: 118 VSNNEDNNELRNTWKPEGSGEIGKIATATGKEAKLSHHEVLLRLDGYDPERGARIVGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFL+ V L L+ Y LS +K Y PL P M K+VM + AQL+QFDEELYKVI
Sbjct: 178 YFLRSYGVFLNQALINYGLSFLTKKDYVPLQAPVMMNKDVMAKTAQLSQFDEELYKVID- 236
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE--- 253
GD D+KYLIATSEQPI A H W P LP+RY G S+CFR+E
Sbjct: 237 ----GD--------DEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGS 284
Query: 254 ------------------------------------DLTKS------IAYRVVNIVSGAL 271
+L++ + YRVV IVSG L
Sbjct: 285 HGKDAWGIFRVHAFEKIEQFCITEPEKSWEEFDRMINLSEQFYQSLGLPYRVVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEK-IEFVHMLNA 330
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G KK+NE+ ++VH LN+
Sbjct: 345 NNAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRSG-IKKLNEREKKYVHCLNS 403
Query: 331 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T CAT R +C ILE +QT+ G+ IP+ LRK++P E IP++K P + KK+
Sbjct: 404 TLCATERALCCILENYQTDDGLVIPEVLRKYIPG----EPEFIPYLKDLPKNSTSQKKK 458
>gi|146163080|ref|XP_001010732.2| seryl-tRNA synthetase family protein [Tetrahymena thermophila]
gi|146146175|gb|EAR90487.2| seryl-tRNA synthetase family protein [Tetrahymena thermophila
SB210]
Length = 469
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/452 (40%), Positives = 236/452 (52%), Gaps = 91/452 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD++ FR EKGGDPEK++++Q+ R+ VELVD+V+ D +WR+ ++ + K +
Sbjct: 1 MGLDINDFRKEKGGDPEKIKESQRRRYAKVELVDEVVALDEEWRKSQYNYEQARKELRIV 60
Query: 61 SKVIGEKMKA------------------------------KEPVGDSSTLPGNHLHPSVP 90
IGE+ K KE + + GN +H SV
Sbjct: 61 QTAIGERKKKDKTDACEDLLAEKAKIEEKIKALEVESSEKKEKLEVTLKKIGNIVHDSVV 120
Query: 91 VSNNEDENGIVRTKGDT--------EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLK 142
V NNED NG+VRT GD E H ++ M+DG D + G +AG RGYFLK
Sbjct: 121 VHNNEDFNGVVRTWGDDIKRVIKIDETPGAAHHHQILYMLDGFDQKRGQKIAGHRGYFLK 180
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
V L L + ++KGY P+YTPFFM+K+VM E QL+ FDE+LYKV
Sbjct: 181 NYGVLLVQALCTFGQQFLMKKGYCPMYTPFFMKKDVMGETCQLSDFDEQLYKVDSTSVMH 240
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
+ +E +KYLIATSEQPI A H W+ LP+RY G+STCFR+E
Sbjct: 241 AEEQKTLNEDKEKYLIATSEQPISAFHSGEWIDSKELPLRYAGLSTCFRKEAGAAGRETW 300
Query: 254 ------------------------DLTKSIA------------YRVVNIVSGALNHAAAK 277
+L + I YRVVNIVSGALN AAAK
Sbjct: 301 GVYRVHQFEKVEQFVLCKPEDSWDELERMIKISEEFMQELGLPYRVVNIVSGALNDAAAK 360
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT-------KKMNEKIEFVHMLNA 330
K DLEAWFPG G ++ELVSCSNC D+QSR L V G+ K NEK +FVHMLN
Sbjct: 361 KYDLEAWFPGYGQYKELVSCSNCTDFQSRGLNVTTGEVIPGKKDGDKGNEK-KFVHMLNG 419
Query: 331 TACATTRVICAILETHQTETGVRIPDCLRKFV 362
T CA R + ILE +Q + GVR+P CL FV
Sbjct: 420 TLCAAQRTLTCILENYQEKDGVRVPKCLVPFV 451
>gi|171692755|ref|XP_001911302.1| hypothetical protein [Podospora anserina S mat+]
gi|170946326|emb|CAP73127.1| unnamed protein product [Podospora anserina S mat+]
Length = 450
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/441 (43%), Positives = 234/441 (53%), Gaps = 90/441 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F E+GG+PEK+R++Q+ R E VD+VI R+ ++ A FN N
Sbjct: 1 MLDINDFIAERGGNPEKIRESQRKRHAPEEAVDEVIALFEDHRKTQYAATQFNAKINEVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP----------------------------GNHLHPSVPVSN 93
K IG K KAKE V + GN +H SVPVSN
Sbjct: 61 KQIGPKKKAKEDVTELLAKKAELEKEKKDMLAQAAEKQQILNAKLKTIGNLVHESVPVSN 120
Query: 94 NEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N +VRT +G T E + SH +++ +DG D G V G RGYFLK + L
Sbjct: 121 NEDNNEVVRTWAPEGVTFEKKNVLSHHEVLEKLDGYDPVRGVKVVGHRGYFLKKWGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
++ Y L +K Y L TP M KE M + AQL+QFDEELYKV GD A
Sbjct: 181 QAIINYGLEFLDQKDYIALGTPMLMLKEQMAKTAQLSQFDEELYKV------TGDQA--- 231
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------D 254
DKYLIATSEQPI A H D WL LP++Y G STCFR+E +
Sbjct: 232 ----DKYLIATSEQPISAFHSDEWLQSKDLPLKYAGYSTCFRKEAGAHGRDVWGIFRVHE 287
Query: 255 LTK------------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
TK I YRVV IVSGALN+AA+KKLDLEAW
Sbjct: 288 FTKVEQFCLTDPEKSWEMFDQMIANSEEFYKSLGIPYRVVAIVSGALNNAASKKLDLEAW 347
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G F+ELVSCSNC DYQSR L +R+G K+ K +VH LN+T ATTR ICAILE
Sbjct: 348 FPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTEIKKTYVHALNSTLTATTRTICAILE 407
Query: 345 THQTETGVRIPDCLRKFVPAV 365
QTE GV+IP+ LRK++P
Sbjct: 408 NFQTEDGVKIPEPLRKYLPGA 428
>gi|254566971|ref|XP_002490596.1| Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase
[Komagataella pastoris GS115]
gi|238030392|emb|CAY68315.1| Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase
[Komagataella pastoris GS115]
gi|328350984|emb|CCA37384.1| seryl-tRNA synthetase [Komagataella pastoris CBS 7435]
Length = 460
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 188/477 (39%), Positives = 244/477 (51%), Gaps = 106/477 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F E+GGDPE +RK+QK R +VE+VD++I W + R + D NK +N
Sbjct: 1 MLDIVQFIEERGGDPEAIRKSQKARGDSVEIVDEIISEYKDWVKIRFELDELNKQQNKVQ 60
Query: 62 KVIG-----------------------EKMKAKEPVGDSS-----TLPGNHLHPSVPVSN 93
K IG E++ KE D + GN +H SVP+S+
Sbjct: 61 KEIGLKFKKKEDPKELLQKKEEIVKAKEQLNLKEQEADRNLRFKVNQVGNIVHESVPISD 120
Query: 94 NEDENGIVR--------------TKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGY 139
NED N +VR T K SH +++ +DG D E G + G RGY
Sbjct: 121 NEDNNELVRDWAPEGTNIKEVTNIATATGAPAKLSHHEVLLRLDGYDPERGVKIVGHRGY 180
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
FL+ V L L+ Y LS +KGY PL P M K+VM + AQL+QFDEELYKV
Sbjct: 181 FLRNYGVFLNQALINYGLSYLAQKGYLPLQAPVMMNKDVMAKTAQLSQFDEELYKVTD-- 238
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED--- 254
GD D+KYLIATSEQPI A H + W P+ LPIRY G S+CFR+E
Sbjct: 239 ---GD--------DEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYAGFSSCFRREAGSH 287
Query: 255 --------------------LTK----------------------SIAYRVVNIVSGALN 272
LT+ + YRVV IVSG LN
Sbjct: 288 GKDAWGIFRVHAFEKIEQFCLTEPDKSWEEFDRMIGAAEGFYQSLGLPYRVVGIVSGELN 347
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
+AAAKK DLEAWFP F+ELVSCSNC DYQSR L +R G ++ ++VH LN+T
Sbjct: 348 NAAAKKYDLEAWFPFQKEFKELVSCSNCTDYQSRNLEIRCGIKSVTQKEKKYVHCLNSTL 407
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
CAT R +C +LE +QTE G+++P+ LRK++P E IPFVK P + KK+
Sbjct: 408 CATERALCCVLENYQTEDGLKVPEVLRKYIPG----EPEFIPFVKELPKNSTSQKKK 460
>gi|156844517|ref|XP_001645321.1| hypothetical protein Kpol_1037p60 [Vanderwaltozyma polyspora DSM
70294]
gi|156115981|gb|EDO17463.1| hypothetical protein Kpol_1037p60 [Vanderwaltozyma polyspora DSM
70294]
Length = 458
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/478 (40%), Positives = 250/478 (52%), Gaps = 110/478 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+P+ ++++QK R+ +VELVD++I + W + R + D NK N
Sbjct: 1 MLDVNQFIVEKGGNPDLIKESQKARYASVELVDEIIADYKNWVKTRFELDELNKKLNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D+S L GN +HPSV
Sbjct: 61 KDIGLKFKTKE---DASELLAEKDKINDEKKQLIEKEQQEDKDLKYKVNQIGNIVHPSVV 117
Query: 91 VSNNEDENGIVRT---KGDTEV---------RKKYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSN+ED N +V+T +G EV SH +++ +DG D E G ++G RG
Sbjct: 118 VSNDEDNNELVKTWKPEGLEEVGPIASATGKPAALSHHEILLRLDGYDPERGVKISGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFL+ V L L+ Y L+ + GY PL P M KEVM AQL+QFDEELYKVI
Sbjct: 178 YFLRNYGVFLNQALINYGLNFLAKNGYVPLQAPVMMNKEVMARTAQLSQFDEELYKVID- 236
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
GD D+KYLIATSEQPI A H + W P+ LPIRY+G STCFR+
Sbjct: 237 ----GD--------DEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYVGYSTCFRREAGS 284
Query: 253 ---------------------------------------EDLTKS--IAYRVVNIVSGAL 271
E+ KS + YRVV IVSG L
Sbjct: 285 HGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDKMINHSEEFYKSLKLPYRVVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
AT R +C ILE +QTE G+ IP+ LRK++P E IPFVK P + KK+
Sbjct: 405 LSATQRALCCILENYQTEDGLIIPEVLRKYMPG----EPEFIPFVKELPKNSTSNKKK 458
>gi|347836872|emb|CCD51444.1| similar to seryl-tRNA synthetase [Botryotinia fuckeliana]
Length = 480
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 195/479 (40%), Positives = 249/479 (51%), Gaps = 100/479 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F TE+GG+P+ ++ +Q+ R+ E+VD+VI R+ ++ A N N
Sbjct: 1 MLDVNDFITERGGNPQTIKDSQRRRYAPEEVVDEVIAMYEDHRKTQYAATQVNSKINETQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K KAKE D++ L GN +H SVP
Sbjct: 61 KEIGAKKKAKE---DATELLQKKADLTKEKKTWDDAAAEKEVLLNKKIGTIGNLVHESVP 117
Query: 91 VSNNEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
V+N+ED N +RT +G T E + SH +++T +DG D E G V G RGYFLK V
Sbjct: 118 VNNDEDHNEELRTWAPQGVTVEKKDVLSHHEVLTRLDGYDPERGVKVVGHRGYFLKKWGV 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ Y L KGYTPL TP FM KE M + AQL QFDEELYKV+
Sbjct: 178 FLNQALINYGLEFLDSKGYTPLQTPQFMLKEYMAKTAQLEQFDEELYKVV---------- 227
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
+ D +DKYLIATSEQPI A H D WL +PIRY G S+C+R+E
Sbjct: 228 -DGDAQNDKYLIATSEQPISAFHADEWLTAKDMPIRYAGFSSCYRREAGSHGRDAWGIFR 286
Query: 254 -------------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDL 281
D KS + YRVV IVSGALN+AAAKK DL
Sbjct: 287 VHQFEKIEQFVLTDPEKSWEEFDRMISFSEEFYQSLGVPYRVVAIVSGALNNAAAKKYDL 346
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP G ++ELVSCSNC DYQSR L +RYG + + +VH LN+T CAT R +C
Sbjct: 347 EAWFPFQGEYKELVSCSNCTDYQSRALEIRYGPKTQTGIRKNYVHALNSTLCATERALCC 406
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQKEGMKKK 399
+LE QTE G +P LRK++P A E IPF K P D K + K ++ K K
Sbjct: 407 LLENFQTEEGFNVPAPLRKYLPG-----APEFIPFSKELPKDTTSQKAKGKAEKAPKPK 460
>gi|254577065|ref|XP_002494519.1| ZYRO0A03410p [Zygosaccharomyces rouxii]
gi|238937408|emb|CAR25586.1| ZYRO0A03410p [Zygosaccharomyces rouxii]
Length = 459
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 189/479 (39%), Positives = 251/479 (52%), Gaps = 110/479 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+PE +RK+QK R +VE+VD++I + W + R + D NK N
Sbjct: 1 MLDVNQFIEEKGGNPELIRKSQKARGASVEIVDEIIADYKNWVKTRFELDELNKQLNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D+S L GN +HPSV
Sbjct: 61 KDIGLKFKNKE---DASGLLAEKDKLTNEKKELTEKEQKEDNDLKVKVNVVGNIVHPSVV 117
Query: 91 VSNNEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSN+E+ N +VRT G ++++ K SH +++ +DG D E G ++G RG
Sbjct: 118 VSNDEENNELVRTWGPKDLKEVGPIAAATGKPAKLSHHEVLLRLDGYDPERGVKISGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YF + V L L+ Y LS KGYTPL P M KEVM + AQL+QFDEELYKV+
Sbjct: 178 YFFRNNGVFLNQALINYGLSFLATKGYTPLQPPVMMNKEVMGKTAQLSQFDEELYKVMD- 236
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED-- 254
GD D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E
Sbjct: 237 ----GD--------DEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYAGYSSCFRREAGA 284
Query: 255 ---------------------LTK----------------------SIAYRVVNIVSGAL 271
LT+ ++ YRVV IVSG L
Sbjct: 285 HGKDAWGIFRVHAFEKIEQFCLTEPEKSWEEFDRMISLSEEFYQGLNLPYRVVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T
Sbjct: 345 NNAAAKKFDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
AT R +C +LE +QTE G+ +P+ LRK++P E +PF+K P + K +K
Sbjct: 405 LAATQRALCCVLENYQTEDGLVVPEVLRKYIPG----EPEFLPFIKELPKNSTSNKGKK 459
>gi|298709359|emb|CBJ31293.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 689
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 192/471 (40%), Positives = 250/471 (53%), Gaps = 104/471 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+++FR E P+ +R++Q+ RF+ VE+VD+VI+ D KWR+ R + D NK +N
Sbjct: 1 MPLDINMFRRE----PDLIRESQRRRFQPVEIVDEVIDLDTKWRESRSRIDFLNKDRNRY 56
Query: 61 SKVIGEKMKAKEPVGD-----------------------------SSTLP--GNHLHPSV 89
K E KAK+ G+ S LP GN + V
Sbjct: 57 QK---EVTKAKKAGGEDPENAAKIKEVAKEVKIVEAKMVELSQQVSKLLPKIGNIVADDV 113
Query: 90 PVSNNED-ENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
PVSN+E+ +N +V T G T +KY H +++ I G + E G VAG R YFL+ +
Sbjct: 114 PVSNDEEKDNKVVSTFGPTPTGEKYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLL 173
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L L+ Y ++ ++ Y+ L P+FM K+VM VAQL QFDEELYKV G G
Sbjct: 174 LNQALINYGIAFLRKRNYSVLQPPYFMSKDVMAGVAQLEQFDEELYKVSGSG-------- 225
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------- 253
++KYLIATSEQPICA H+ WL E+ LP+RY GVSTCFR+E
Sbjct: 226 ----TEEKYLIATSEQPICAFHKGEWLGESELPLRYGGVSTCFRKEAGAHGKDTWGIFRV 281
Query: 254 --------------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLD 280
DL KS I+YRVVNIVSG LN+AA KK D
Sbjct: 282 HQFEKVEQFCICEGDLEKSAAMQVEMSKASEEFYQSLGISYRVVNIVSGELNNAAIKKYD 341
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
LEAWFP FRELVSCSNC DYQSR + VR G K + +FVHMLN+T CATTR +
Sbjct: 342 LEAWFPAYEEFRELVSCSNCTDYQSRGMEVRSGHKKMGQVEKKFVHMLNSTLCATTRTMS 401
Query: 341 AILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
ILE +QT TGV +P+ L F+ + + +VK P + E K K
Sbjct: 402 CILENYQTPTGVTVPEVLVPFMGGITF-----LDYVKELPKGKREAKGATK 447
>gi|366988435|ref|XP_003673984.1| hypothetical protein NCAS_0A10450 [Naumovozyma castellii CBS 4309]
gi|342299847|emb|CCC67603.1| hypothetical protein NCAS_0A10450 [Naumovozyma castellii CBS 4309]
Length = 459
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 188/475 (39%), Positives = 248/475 (52%), Gaps = 104/475 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+PE +R++QK R+ +VELVD +I + W + R + D NK N
Sbjct: 1 MLDINQFIEEKGGNPELIRQSQKARYASVELVDDIIADYKDWVKTRFELDELNKKLNKLQ 60
Query: 62 KVIGEKMKAKE----------------------PVGDSSTLP------GNHLHPSVPVSN 93
K IG K K KE D L GN +HPSV +SN
Sbjct: 61 KDIGLKFKNKEDPKELLAEKDEITAQKAKLTEQEQADDKDLKEKIMQVGNIVHPSVVISN 120
Query: 94 NEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+ED N +VRT ++ + K SH +++ +DG D E G ++G RG+FL
Sbjct: 121 DEDNNELVRTWKPEDLEEVGPVASVTGKPAKLSHHEILLRLDGYDPERGVKISGHRGFFL 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y L+ +KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 181 RNYGVFLNQALINYGLNFLAQKGYIPLQAPVMMNKEVMAKTAQLSQFDEELYKVID---- 236
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED----- 254
GD D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+E
Sbjct: 237 -GD--------DEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGSHGK 287
Query: 255 ------------------LTK----------------------SIAYRVVNIVSGALNHA 274
LT+ + YRVV IVSG LN+A
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEPENSWEEFDKMIDHSEEFYQSLKLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T A
Sbjct: 348 AAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLSA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T R +C ILE +QTE G+ +P+ LR+++P E +PFVK P + KK+
Sbjct: 408 TERALCCILENYQTEDGLVVPEVLRRYIPG----EPEFLPFVKELPKNSTSNKKK 458
>gi|300120408|emb|CBK19962.2| unnamed protein product [Blastocystis hominis]
Length = 449
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 185/466 (39%), Positives = 247/466 (53%), Gaps = 92/466 (19%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M +D++L R KGG P+ V+ +Q RF V LVD+VI D +WR+ D N+ K +
Sbjct: 1 MPIDINLLRAFKGGLPDLVKASQAKRFAKVALVDEVISLDNQWRKHVGDLDKLNRDKRVL 60
Query: 61 SKVIGEKMK----AKEPVGDSSTLP------------------------GNHLHPSVPVS 92
SK IG K K + S L GN +H SVPV+
Sbjct: 61 SKEIGMKRKQGLNTDRETTNVSLLSQQILDMQKSIENVRKMRDTKLGQIGNIVHDSVPVA 120
Query: 93 NNEDENGIVRTKGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
+E +N V + G K Y H +L+ M+DG + E G VAG RGYFLKG AV L
Sbjct: 121 KDESQNVEVASWGSPRPMTKDMYCHHELLWMLDGYEPERGTRVAGHRGYFLKGSAVLLNQ 180
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ YA+ ++G+T L TP+FM ++VM VAQL FDE LY V E +
Sbjct: 181 AIIMYAMQWNTKRGFTLLQTPYFMNRDVMAGVAQLEDFDESLYHV------------EGE 228
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
E ++KYLIATSEQPIC H WL E LP++Y G ST FR+E
Sbjct: 229 EGEEKYLIATSEQPICGYHMGEWLDEKELPLKYTGFSTNFRKEAGAHGKDTWGIFRVHQF 288
Query: 255 -------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
++K ++ YRVVNIVSGALN+AAAKK DLE WF
Sbjct: 289 DKVEQFVISKPEESWAMHEYMIQNSREFYESLNLPYRVVNIVSGALNNAAAKKYDLEGWF 348
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
PG A+RELVSCSNC DYQSR + +R G TKK NE+ ++VHMLN+T CA TR +C ILE
Sbjct: 349 PGYEAYRELVSCSNCTDYQSRAMEIRCGATKKKNEEKKYVHMLNSTLCALTRTLCCILEN 408
Query: 346 HQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
+QT GV IP+ L+ ++ + +PF + P + ++++K
Sbjct: 409 YQTSEGVEIPEVLQPWMGGIKF-----LPFKRPLPPAMLKAREERK 449
>gi|336269802|ref|XP_003349661.1| hypothetical protein SMAC_07013 [Sordaria macrospora k-hell]
gi|380088800|emb|CCC13235.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 477
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 190/434 (43%), Positives = 232/434 (53%), Gaps = 84/434 (19%)
Query: 11 EKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKA 70
E+GG+PEK+R++Q+ RF VE VD+VI R+ + A N N K IG K KA
Sbjct: 35 ERGGNPEKIRESQRKRFAPVEAVDEVIALWEDHRKTAYSATQLNAKINEVQKQIGPKKKA 94
Query: 71 K--------EPVGDSSTLP-------GNHLHPSVPVSNNEDENGIVRTKG----DTEVRK 111
G S+T GN +H SVPVSNNED N + R+ E +
Sbjct: 95 YTTHIRDNCSTTGCSNTTALVKVKTIGNLVHDSVPVSNNEDNNTVERSWAPEGVSFEKKD 154
Query: 112 KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTP 171
SH +++ +DG D E G V G RGYFLK V L ++ Y L E+ YTPL TP
Sbjct: 155 VLSHHEVLRKLDGYDPERGVKVVGHRGYFLKKWGVFLNQAIINYGLEFLSEREYTPLQTP 214
Query: 172 FFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRD 231
M +E M + AQL+QFDEELYKV GD A DKYLIATSEQPI A H D
Sbjct: 215 QLMLREQMAKTAQLSQFDEELYKV------TGDQA-------DKYLIATSEQPISAFHSD 261
Query: 232 SWLPEASLPIRYLGVSTCFRQE---------------DLTK------------------- 257
WL LP++Y G STCFR+E + TK
Sbjct: 262 EWLQAKDLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKVEQFCVTEPEKSWEMFDHM 321
Query: 258 -----------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSR 306
I YRVV IVSGALN+AAAKKLDLEAWFP G F+ELVSCSNC DYQSR
Sbjct: 322 ISNSEAFYQSLGIPYRVVAIVSGALNNAAAKKLDLEAWFPHQGEFKELVSCSNCTDYQSR 381
Query: 307 RLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVY 366
L +R+G K+ + K +VH LN+T ATTR ICAILE QT GV++P+ LRK++P
Sbjct: 382 DLEIRFGVKKQTDIKKTYVHCLNSTLTATTRTICAILENFQTPEGVKVPEPLRKYLP--- 438
Query: 367 VNEAGEIPFVKTAP 380
G F+ AP
Sbjct: 439 ----GAPEFIPFAP 448
>gi|303319345|ref|XP_003069672.1| seryl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240109358|gb|EER27527.1| seryl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 473
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 181/461 (39%), Positives = 242/461 (52%), Gaps = 97/461 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ ++GGDP+KV+++Q+ RF + ELVD+VI R+ R++A N
Sbjct: 1 MLDIADLIADRGGDPKKVKESQRRRFASEELVDEVISLYEDARRTRYEASQIGSKINALQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K IG K K KE D+S L GN++H SVP
Sbjct: 61 KEIGMKKKNKE---DASELLAQKAKLEQDKKAQEDLAVEKEKLRDRKLKTIGNYVHDSVP 117
Query: 91 VSNNEDENGIVRT----KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
+SNNED+N I++T E R SH +++T +DG D E G + G RG+ L G +
Sbjct: 118 ISNNEDDNAIIKTWAPEGAKVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGFCLTGYGL 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L + LV Y L KGY P PFFM ++ M + AQL QFDEELYKV
Sbjct: 178 FLNLALVNYGLEFLFNKGYKPNQPPFFMLRDYMAKTAQLEQFDEELYKV----------T 227
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------ 254
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E
Sbjct: 228 ESEDKSTDKYLIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEAGSHGKDAWGIFR 287
Query: 255 -----------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDL 281
LTK + Y++V+IVSGALN+AA+KK DL
Sbjct: 288 VHQFEKAKQFILTKPEESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALNNAASKKWDL 347
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP G ++ELVSCSNC DYQSR L +R+G K + K +VH LNAT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATLCATERALCC 407
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
ILE +Q E G+ +P+ LRK++P + +P+ K P D
Sbjct: 408 ILENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKD 444
>gi|164429332|ref|XP_955965.2| seryl-tRNA synthetase [Neurospora crassa OR74A]
gi|157073440|gb|EAA26729.2| seryl-tRNA synthetase [Neurospora crassa OR74A]
Length = 506
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 196/482 (40%), Positives = 243/482 (50%), Gaps = 107/482 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MV L F E+GG+PEK+R++Q+ RF VE+VD+VI R+ + A N N
Sbjct: 31 MVHGLVDFIAERGGNPEKIRESQRKRFAPVEVVDEVIALWEDHRKTAYSAMQLNAKINEV 90
Query: 61 SKVIGEKMKAKEPVGDSSTLP--------------------------------------G 82
K I K KA P ++ G
Sbjct: 91 QKQIAPKKKAYNPYPSTTIAKEDVSDLLKQKADLEKEKKDLLDSAAEKEKLLKVKVKTIG 150
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDT----EVRKKYSHVDLITMIDGVDSEAGAIVAGGRG 138
N +H SVPVSNNED N + RT E + SH +++ +DG D E G V G RG
Sbjct: 151 NLVHDSVPVSNNEDNNTVERTWAPEGVAFEKKDVLSHHEVLRKLDGYDPERGVKVVGHRG 210
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFLK V L ++ Y L E+ YTPL TP M ++ M + AQL+QFDEELYKV
Sbjct: 211 YFLKKWGVFLNQAIINYGLEFLSEREYTPLQTPQLMLRDQMAKTAQLSQFDEELYKV--- 267
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----- 253
GD A DKYLIATSEQPI A H D WL LP++Y G STCFR+E
Sbjct: 268 ---TGDQA-------DKYLIATSEQPISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGAHG 317
Query: 254 ----------DLTK------------------------------SIAYRVVNIVSGALNH 273
+ TK I YRVV IVSGALN+
Sbjct: 318 KDVWGIFRVHEFTKVEQFCITEPEKSWEMFEHMISNSEAFYQSLGIPYRVVAIVSGALNN 377
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AAAKKLDLEAWFP G F+ELVSCSNC DYQSR L +R+G K+ + K +VH LN+T
Sbjct: 378 AAAKKLDLEAWFPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLT 437
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
ATTR ICAILE QT GV++P+ LRK++P G F+ AP +E K+ K K
Sbjct: 438 ATTRTICAILENFQTPEGVKVPEPLRKYLP-------GAPEFIPFAPEPVKEVKEGKSGK 490
Query: 394 EG 395
+G
Sbjct: 491 KG 492
>gi|320040889|gb|EFW22822.1| seryl-tRNA synthetase [Coccidioides posadasii str. Silveira]
Length = 473
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/461 (39%), Positives = 242/461 (52%), Gaps = 97/461 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ ++GGDP+KV+++Q+ RF + ELVD+VI R+ R++A N
Sbjct: 1 MLDIADLIADRGGDPKKVKESQRRRFASEELVDEVISLYEDARRTRYEASQIGSKINALQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D+S L GN++H SVP
Sbjct: 61 KEIGMKKKNKE---DASELLAQKAKLEQDKKAQEDLAVEKEKLRDRKLKTIGNYVHDSVP 117
Query: 91 VSNNEDENGIVRT----KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
+SNNED+N I++T E R SH +++T +DG D E G + G RG+ L G +
Sbjct: 118 ISNNEDDNAIIKTWAPEGAKVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGFCLTGYGL 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L + LV Y L KGY P PFFM ++ M + AQL QFDEELYKV
Sbjct: 178 FLNLALVNYGLEFLFNKGYKPNQPPFFMLRDYMAKTAQLEQFDEELYKV----------T 227
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------ 254
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E
Sbjct: 228 ESEDKSTDKYLIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEAGSHGKDAWGIFR 287
Query: 255 -----------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDL 281
LTK + Y++V+IVSGALN+AA+KK DL
Sbjct: 288 VHQFEKIEQFILTKPEESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALNNAASKKWDL 347
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP G ++ELVSCSNC DYQSR L +R+G K + K +VH LNAT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATLCATERALCC 407
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
ILE +Q E G+ +P+ LRK++P + +P+ K P D
Sbjct: 408 ILENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKD 444
>gi|121712548|ref|XP_001273885.1| seryl-tRNA synthetase [Aspergillus clavatus NRRL 1]
gi|119402038|gb|EAW12459.1| seryl-tRNA synthetase [Aspergillus clavatus NRRL 1]
Length = 474
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/468 (39%), Positives = 246/468 (52%), Gaps = 91/468 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL F T++GGD K++++Q+ RF ++VD+V+ R+ R++ N
Sbjct: 1 MIDLADFVTDRGGDINKIKESQRKRFAPEDIVDEVVSLYEGARRARYEVMQVGSELNTLQ 60
Query: 62 KVIGEKMKAKEPVGD------------------SSTLP----------GNHLHPSVPVSN 93
K IG++ K KE D +S L GN++H SVPVSN
Sbjct: 61 KEIGKRKKNKEDADDLIQKKTALEKRKKEAEEYASQLEVKRDAKIRMIGNYVHESVPVSN 120
Query: 94 NEDENGIVRT----KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N +VRT E R SH +++T +DG D E G + G RGY L G + L
Sbjct: 121 NEDNNQVVRTWSPENAVVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L+ Y L KGYTP P FM KE+M + AQL QFDEELYKV +
Sbjct: 181 LALINYGLEFLWRKGYTPNQPPQFMLKELMAKTAQLEQFDEELYKV----------TESE 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED--------------- 254
D+ D+YLIATSEQP+ A+H WL + LPI+Y G STC+R+E
Sbjct: 231 DKSTDRYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 255 --------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
LTK + Y+VV IVSGALN+AA+KK DLEAW
Sbjct: 291 FEKIEQFVLTKPENSWEVFEEMMATSEEFYQSLGLPYQVVAIVSGALNNAASKKYDLEAW 350
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +RYG K + K +VH LNAT CAT R +C ILE
Sbjct: 351 FPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCCILE 410
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
+QT+ G+++P+ LRK++P +PF K P D K++ KQ
Sbjct: 411 NYQTDDGLKVPEHLRKYIPGA----PDFLPFTKELPKDTTSQKQKGKQ 454
>gi|392865353|gb|EAS31135.2| serine-tRNA ligase [Coccidioides immitis RS]
Length = 473
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/461 (39%), Positives = 242/461 (52%), Gaps = 97/461 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ ++GGDP+KV+++Q+ RF + ELVD+VI R+ R++A N
Sbjct: 1 MLDIADLIADRGGDPKKVKESQRRRFASEELVDEVISLYEDARRTRYEASQIGSKINALQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D+S L GN++H SVP
Sbjct: 61 KEIGMKKKNKE---DASELLAQKAKLEQDKKAQEDLAVEKEKLRDRKLKTIGNYVHDSVP 117
Query: 91 VSNNEDENGIVRT----KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
+SNNED+N I++T E R SH +++T +DG D E G + G RG+ L G +
Sbjct: 118 ISNNEDDNAIIKTWAPEGAKVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGFCLTGYGL 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L + LV Y L KGY P PFFM ++ M + AQL QFDEELYKV
Sbjct: 178 FLNLALVNYGLEFLFNKGYKPNQPPFFMLRDYMAKTAQLEQFDEELYKV----------T 227
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------ 254
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E
Sbjct: 228 ENEDKSTDKYLIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEAGSHGKDAWGIFR 287
Query: 255 -----------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDL 281
LTK + Y++V+IVSGALN+AA+KK DL
Sbjct: 288 VHQFEKIEQFILTKPEESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALNNAASKKWDL 347
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP G ++ELVSCSNC DYQSR L +R+G K + K +VH LNAT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATLCATERALCC 407
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
ILE +Q E G+ +P+ LRK++P + +P+ K P D
Sbjct: 408 ILENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKD 444
>gi|258571451|ref|XP_002544529.1| seryl-tRNA synthetase [Uncinocarpus reesii 1704]
gi|237904799|gb|EEP79200.1| seryl-tRNA synthetase [Uncinocarpus reesii 1704]
Length = 472
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/472 (38%), Positives = 250/472 (52%), Gaps = 97/472 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ ++GG+P++V+++Q+ RF + +LVD+VI R+ R+ A N+
Sbjct: 1 MLDIADLVADRGGNPKRVKESQRRRFASEDLVDEVIGLYEDARRTRYDASQIGSKINILQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K IG K K KE D+S L GN++H SVP
Sbjct: 61 KEIGMKKKNKE---DASELLAQKLKLEQDKKAQEDLALEKEKLRDRKLKTIGNYVHDSVP 117
Query: 91 VSNNEDENGIVRTKG--DTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
+SNNED+N I++T T+V K+ SH +++T +DG D E G + G RG+ L G +
Sbjct: 118 ISNNEDDNAIIKTWAPEGTKVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGFCLTGYGL 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L + LV Y L +KGY P PFFM +E M + AQL QFDEELYKV
Sbjct: 178 FLNLALVNYGLEFLFQKGYKPNQPPFFMLREYMAKTAQLEQFDEELYKV----------T 227
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------ 254
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E
Sbjct: 228 ESEDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCFRKEAGSHGKDAWGIFR 287
Query: 255 -----------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDL 281
LTK + Y++++IVSGALN+AA+KK DL
Sbjct: 288 VHQFEKIEQFVLTKPEDSWKAFDDMIATSEEFYQSLGLPYQIISIVSGALNNAASKKWDL 347
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP G ++ELVSCSNC DYQSR L +RYG K + K +VH LNAT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQSRELDIRYGPKKTTDTKKAYVHALNATLCATERALCC 407
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
+LE +Q E G+ +P+ LRK++P + +P+ K P D K + K K
Sbjct: 408 VLENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKDTTSQKAKSKVK 455
>gi|400596161|gb|EJP63945.1| putative serine-tRNA ligase, cytosolic [Beauveria bassiana ARSEF
2860]
Length = 457
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/471 (39%), Positives = 253/471 (53%), Gaps = 94/471 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F E+GG+PE++R++Q+ RF + +VD+VI R+ ++ A + N
Sbjct: 1 MLDVNDFIVERGGNPERIRESQRRRFADEAVVDQVIALFEDHRKTQYSATQISSKINEVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------SSTLP------------GNHLHPSVPVSN 93
K+IG K KAKE D S + GN + SVP+SN
Sbjct: 61 KLIGAKKKAKEDATDLLQQKIELEKEKKLTVESAVQKEKDLRTKIKTIGNIVDDSVPISN 120
Query: 94 NEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+ED N + RT +G T E R SH +++ +DG D + G V G RGYFL+ V L
Sbjct: 121 SEDNNAVQRTWAPEGITVEKRNVLSHHEVLLRLDGYDPDRGVKVVGHRGYFLRQWGVFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ Y L ++GY PL P FM K+ M + AQL FDE+LYKV+ +
Sbjct: 181 QALINYGLEFLSQRGYCPLQAPQFMLKDYMAKTAQLDDFDEQLYKVV-----------DG 229
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
DE +DKYLIATSEQPI A H D WL LPI+Y G STC+R+E
Sbjct: 230 DEANDKYLIATSEQPISAFHADEWLIAKDLPIKYAGYSTCYRREAGSHGRDAWGIYRVHQ 289
Query: 254 ----------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDLEAW 284
D KS + Y+V+ IVSGALN+AAAKKLDLEAW
Sbjct: 290 FEKVEQFVLTDPEKSWEAFEEMIGVSEEFYQTLGLPYQVIAIVSGALNNAAAKKLDLEAW 349
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQSR L +R+G + + K ++VH LN+T CATTR +C +LE
Sbjct: 350 FPHQGEYKELVSCSNCTDYQSRALDIRFGAKTQTDAKKKYVHCLNSTLCATTRTLCCVLE 409
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQKE 394
+QT+ G+R+P+ LRK++P A E IPF + P + KK Q+E
Sbjct: 410 NYQTDEGLRVPEPLRKYLPG-----APEFIPFARDLPKEAAGVKKTLPQRE 455
>gi|444322205|ref|XP_004181758.1| hypothetical protein TBLA_0G03020 [Tetrapisispora blattae CBS 6284]
gi|387514803|emb|CCH62239.1| hypothetical protein TBLA_0G03020 [Tetrapisispora blattae CBS 6284]
Length = 458
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/475 (38%), Positives = 249/475 (52%), Gaps = 104/475 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+P+ ++K+QK R+ +VELVD++I + W + R + D NK N
Sbjct: 1 MLDVNQFIVEKGGNPDLIKKSQKARYASVELVDEIIADYKDWVKTRFELDEINKSLNKLQ 60
Query: 62 KVIGEKMKAKEP----------------------------VGDSSTLPGNHLHPSVPVSN 93
K IG K KAKE + + L GN +HPSV VSN
Sbjct: 61 KEIGLKFKAKEDAKPLLAEKDKLTAEKKILTEKEQKEDKDLKNKVNLVGNIVHPSVVVSN 120
Query: 94 NEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E+ N +VRT ++ + + SH +++ +DG D E G ++G RG+F
Sbjct: 121 DEENNELVRTWKPKDLPEVGPVASCTGKPAQLSHHEILLRLDGYDPERGVKISGHRGFFF 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y LS +KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 181 RNYGVFLNQALINYGLSFLAKKGYIPLQAPVMMNKEVMAQTAQLSQFDEELYKVI----- 235
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE------ 253
D D+KYLIATSEQPI A H W P+ LPI+Y+G S+CFR+E
Sbjct: 236 --------DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIKYVGYSSCFRREAGSHGK 287
Query: 254 -----------------------------DL----------TKSIAYRVVNIVSGALNHA 274
D+ T + YR+V IVSG LN+A
Sbjct: 288 DAWGVFRVHAFEKIEQFVLTEPEKSWEAFDMMIANSEEFYQTLGLPYRIVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T A
Sbjct: 348 AAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T R +C +LE +QTE G+ +P+ LRK++P E +P+VK P + KK+
Sbjct: 408 TERALCCVLENYQTEDGLIVPEVLRKYIPG----EPEFLPYVKELPKNSTSNKKK 458
>gi|322699748|gb|EFY91507.1| putative serine-tRNA ligase, cytosolic [Metarhizium acridum CQMa
102]
Length = 431
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/430 (42%), Positives = 244/430 (56%), Gaps = 73/430 (16%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F TE+GGDPEK+R++Q+ R NV++VD++I R+ ++ A N N
Sbjct: 1 MLDVIDFITERGGDPEKIRESQRRRSANVDVVDEIIALFEDHRRTQYSATQVNSKINDVQ 60
Query: 62 KVIGEKMKAKE----------------------PVGDSSTLP------GNHLHPSVPVSN 93
K IG K KAKE V + L GN++H SVPVSN
Sbjct: 61 KQIGAKKKAKEDADELLKQKGELEKKKKALVESAVEKDALLKAKIKTVGNYVHDSVPVSN 120
Query: 94 NEDENGIVRT---KGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
NED N + RT +G T ++ SH +++ +DG D + G V G RGYFL+ V L
Sbjct: 121 NEDNNVVERTWAPEGATVEKRSNVLSHHEVLLRLDGYDPDRGVKVVGHRGYFLRQWGVFL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
L+ Y L ++GYTPL TP FM K+ M + AQL QFDEELYKV K
Sbjct: 181 NQALINYGLEFLSQRGYTPLQTPQFMLKDYMGKTAQLEQFDEELYKVTDGEAK------- 233
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIR--------------------YLGVST 248
+DKYLIATSEQPI A H D WL LPI+ +G+S
Sbjct: 234 ----NDKYLIATSEQPISAFHADEWLIPKDLPIKAKIEQFLLTDPEKSWDAFHDMIGISE 289
Query: 249 CFRQEDLTKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRL 308
F + + + Y++V+IVSGALN+AA+KKLDLEAWFP G ++ELVSCSNC DYQSR L
Sbjct: 290 EFYK---SLELPYQIVSIVSGALNNAASKKLDLEAWFPFQGEYKELVSCSNCTDYQSRAL 346
Query: 309 LVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVN 368
+R+G + + K ++VH LN+T CATTR +C ILE +QTE G+R+P+ LRK++P
Sbjct: 347 EIRFGSKMQTDVKKKYVHCLNSTLCATTRTMCCILENYQTEEGLRVPEPLRKYLPG---- 402
Query: 369 EAGE-IPFVK 377
A E IPF K
Sbjct: 403 -APEFIPFAK 411
>gi|402221385|gb|EJU01454.1| serine-tRNA ligase [Dacryopinax sp. DJM-731 SS1]
Length = 467
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 187/471 (39%), Positives = 248/471 (52%), Gaps = 101/471 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F KGG+ E++R +QK R+ +VELVD++I+ W + ++ + +K N
Sbjct: 1 MTLDVTTFIDAKGGNAEEIRVSQKKRYASVELVDEIIQMYQDWVKMDYETNQMSKATNAI 60
Query: 61 SKVIGEKMKAKEP----VGDSSTLP------------------------GNHLHPSVPVS 92
K I K KAKE + D + L GN ++ VPVS
Sbjct: 61 QKEITAKRKAKENADELIADKAKLDAEIAGNKKKVAEAEVAMRAKAATVGNLVYKDVPVS 120
Query: 93 NNEDENGIVRT----KGDTEVRKK----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
++ED NGIVRT + +V+KK H +++ ID VD E G + G RGYFL
Sbjct: 121 DDEDNNGIVRTWHPDGPNGQVQKKDNEILPHHEVMHCIDAVDLERGTKIMGHRGYFLIND 180
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
+ L L+ Y L ++ Y + TPF M+K++M + AQL+QFDEELYKV G
Sbjct: 181 GLDLNQALISYGLDFLRKRNYRRIQTPFMMKKDMMSKTAQLSQFDEELYKVTG------- 233
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE--------- 253
DE DDKYLIATSEQPI A+H D W P+ LPIRY G STCFR+E
Sbjct: 234 -----DE-DDKYLIATSEQPISALHSDEWFDQPQTQLPIRYAGYSTCFRKEAGSHGKDTW 287
Query: 254 ---------------------------DLTKS---------IAYRVVNIVSGALNHAAAK 277
D+ + + YR+V IVSGALN+AAA
Sbjct: 288 GIFRVHQFEKLEQFCITAPEKSWEMFNDMVATSEAFYQSLGLPYRLVAIVSGALNNAAAM 347
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLEAWFP GA++ELVS SNC DYQSRRL +RYG +K + K +VHMLN T CAT R
Sbjct: 348 KYDLEAWFPYQGAYKELVSTSNCTDYQSRRLEIRYGLKQKGDSKKVYVHMLNGTLCATER 407
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 388
+C ++E +Q E G+RIP+ L+ Y+ IP+VKT P KK
Sbjct: 408 AMCCLVENYQDENGMRIPEVLQP-----YMQGRTHIPWVKTQPKGSTTVKK 453
>gi|297852062|ref|XP_002893912.1| hypothetical protein ARALYDRAFT_314052 [Arabidopsis lyrata subsp.
lyrata]
gi|297339754|gb|EFH70171.1| hypothetical protein ARALYDRAFT_314052 [Arabidopsis lyrata subsp.
lyrata]
Length = 441
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 244/441 (55%), Gaps = 91/441 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD----NFNK-- 55
+ D+DLFR +PE +R+ Q+ +F +VE+V+++I D WRQ +++ D +FNK
Sbjct: 1 MCDIDLFRK----NPEIIRETQRRKFASVEVVEEIIILDQVWRQRKYEYDCARKDFNKTN 56
Query: 56 ----------------------FKNLCSKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSN 93
K C+K E +A + GN +H SVP+SN
Sbjct: 57 KEVAKLKISDADATEKIQQAEIIKQECTKYEAEVREAYASLEAKLWTMGNLIHDSVPISN 116
Query: 94 NEDENGIVRTKGDTEV----RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+E N +V+ G+ V ++ +H+DL+ +D VD++ GA VAGGRGYFLKG V L
Sbjct: 117 DEANNLLVKVSGEPRVASPGQELTNHMDLVEFLDIVDTKRGAKVAGGRGYFLKGYGVLLN 176
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ Y+L+ +K ++ + M KE M + AQL+QFDEELYKV G+G+ G+
Sbjct: 177 QALINYSLAFLQKKEFSVIQPNCLMTKESMAKCAQLSQFDEELYKVTGEGK--GN----- 229
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
D+K+LIAT+EQP+CA H+ W LPIRY G STCFR+
Sbjct: 230 ---DEKFLIATAEQPLCAQHQGEWFHPTELPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQ 286
Query: 253 -------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAW 284
E++ K+ I YRVV++VSGALN AAAKK DLE W
Sbjct: 287 FEKVEQFCITGPDDSWEMLEEMLKNSEEFYQSLKIPYRVVSVVSGALNDAAAKKYDLEGW 346
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP SG +RELVSCSNC DYQSRRL +RYG K E ++VHMLN+T CAT R IC ILE
Sbjct: 347 FPASGTYRELVSCSNCTDYQSRRLNIRYGYKKSNQETRKYVHMLNSTLCATQRTICCILE 406
Query: 345 THQTETGVRIPDCLRKFVPAV 365
+Q + GV IP+ L+ F+ V
Sbjct: 407 NYQRDDGVDIPEVLQPFMAGV 427
>gi|325190580|emb|CCA25077.1| unnamed protein product [Albugo laibachii Nc14]
Length = 454
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/451 (38%), Positives = 245/451 (54%), Gaps = 93/451 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M +D++ R E+GGDPEKV+++Q+ RF +V+LVD V+ D +WR+ + + + N
Sbjct: 1 MPIDINRLRIERGGDPEKVKEDQRKRFASVDLVDDVLALDEQWRKKQGQVETMQMNVNTI 60
Query: 61 SKVIGEKMKAKEPVGD--------SSTLPG--------------------NHLHPSVPVS 92
I E KAK+ D ++ +PG N + PSVP+S
Sbjct: 61 QTKIKELSKAKKDFKDISEERKNLAAQIPGLKKDADALREQVDRKLATIANTVDPSVPIS 120
Query: 93 NNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
NED+N IV+ G +++ H +++ IDG + E G VAG R YFL G + L+
Sbjct: 121 QNEDDNQIVKEWGKVSSKEELLFHHEVLHRIDGYEPERGVQVAGHRAYFLTGYGLLLEQA 180
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
L+QYA + +++ Y + PFF+ K++M VAQL FDE+LYKV G
Sbjct: 181 LLQYASAFLMQRQYKMIKPPFFINKDIMAGVAQLDDFDEQLYKVEGD------------- 227
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------------- 252
D+KYLIATSEQP+C H+ W+ E+SLP+RY G+STCFR+
Sbjct: 228 -DEKYLIATSEQPLCGYHKGDWIQESSLPLRYGGLSTCFRKESGSHGKDTWGIFRVHQFD 286
Query: 253 ------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFP 286
ED +S ++YRVVNIVSG LN+AA KK DLEAWFP
Sbjct: 287 KVEQFCITEPENSTEMHEEMLKHAEDFYQSLNLSYRVVNIVSGELNNAAVKKYDLEAWFP 346
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
+RELVSCSNC DYQ+R + +R G K+ + ++VHMLN+T CA+TR +C ILE +
Sbjct: 347 AYNEYRELVSCSNCTDYQARAMEIRCGIKKENQREKKYVHMLNSTLCASTRTVCCILENN 406
Query: 347 QTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
Q E GV++P L F+ V IPFV+
Sbjct: 407 QDENGVKVPHVLVPFMGGVTF-----IPFVR 432
>gi|367013338|ref|XP_003681169.1| hypothetical protein TDEL_0D03740 [Torulaspora delbrueckii]
gi|359748829|emb|CCE91958.1| hypothetical protein TDEL_0D03740 [Torulaspora delbrueckii]
Length = 460
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/480 (39%), Positives = 250/480 (52%), Gaps = 110/480 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F +KGG+PE +RK+QK R +VELVD++I + +W + R D NK N
Sbjct: 1 MLDINQFIEDKGGNPELIRKSQKARGASVELVDEIISDYKEWVKTRFDLDELNKKLNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K+KE D+S L GN +HPSV
Sbjct: 61 KEIGLKFKSKE---DASELLAEKEKLTQEKKNLTEREQAEDKDLRSKVFQIGNIVHPSVV 117
Query: 91 VSNNEDENGIVRT-----------KGDTEVR-KKYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSN+E+ N +VRT +G + + SH +++ +DG D E G ++G RG
Sbjct: 118 VSNDEENNELVRTWKPEGLETVGEQGSASGQPARLSHHEVLLRLDGYDPERGVKISGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YF + V L L+ Y LS KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 178 YFFRNYGVFLNQALINYGLSFLASKGYIPLQAPVMMNKEVMAKTAQLSQFDEELYKVI-- 235
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED-- 254
D D+KYLIATSEQPI A H + W P+ LPIRY G S+CFR+E
Sbjct: 236 -----------DGEDEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYAGYSSCFRREAGS 284
Query: 255 ---------------------LTK----------------------SIAYRVVNIVSGAL 271
LT+ + YRVV IVSG L
Sbjct: 285 HGKDAWGVFRVHAFEKIEQFVLTEPEKSWEEFENMINNSEEFYQSLKLPYRVVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
AT R +C +LE +QT+ G+ +P+ LRK++P E +PF K P + +K++KK
Sbjct: 405 LAATQRALCCVLENYQTDEGLIVPEVLRKYIPG----EPEFLPFTKELPKNSTSSKEKKK 460
>gi|345560032|gb|EGX43161.1| hypothetical protein AOL_s00215g617 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/476 (39%), Positives = 247/476 (51%), Gaps = 95/476 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F TE+GGDPE +R++Q+ R K VE VD +I R+ + N
Sbjct: 1 MLDVNSFITERGGDPEAIRESQRRRHKPVEDVDAIIALFKASREATYAVTQTGAKINDAQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP----------------------------GNHLHPSVPVSN 93
K IG + KAKE + L GN +H SVP+S+
Sbjct: 61 KQIGLRKKAKEDATEFLELKISLEKEKKELEVIAKQAEAELNRKLSTIGNFVHDSVPISD 120
Query: 94 NEDENGIVRT---KGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
NED N ++R +G T K+ SH +++T +DG D E GA + G RGYFLK + L
Sbjct: 121 NEDNNALIREWKPEGTTVEAKEGILSHHEVLTRLDGYDPERGAKIVGHRGYFLKMWGLLL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
L+ Y L + KGYTP+ TP FM KE M + AQL QFDEELYKV+ GD
Sbjct: 181 NQALINYGLEFLMNKGYTPISTPQFMNKEYMAKTAQLEQFDEELYKVVD-----GD---- 231
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
D+KYLIATSEQPI A+H D W A +P RY G S+C+R+E
Sbjct: 232 ----DEKYLIATSEQPISALHADEWFTTADVPKRYAGFSSCYRREAGSHGKDAWGIFRVH 287
Query: 254 -----------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDLEA 283
D KS + YRVV IVSGALN+AA+KK DLEA
Sbjct: 288 QFEKVEQFVLCDPEKSWEEFDKMISYSEEFYRSLGLPYRVVAIVSGALNNAASKKYDLEA 347
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFP G ++ELVSCSNC DYQSR L +RYG + + ++VH LN+T AT R +C IL
Sbjct: 348 WFPFQGEYKELVSCSNCTDYQSRSLEIRYGAKTQTDTVKKYVHALNSTLTATERAMCCIL 407
Query: 344 ETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
E +QT G +P+ LRK++P +PF K P D KK+ +Q + + KK
Sbjct: 408 ENYQTPEGFNVPEVLRKYLPG----NPEFLPFTKELPKDTTSEKKKNQQLKVVGKK 459
>gi|145253905|ref|XP_001398465.1| seryl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88]
gi|134084041|emb|CAL00579.1| unnamed protein product [Aspergillus niger]
gi|350634115|gb|EHA22479.1| hypothetical protein ASPNIDRAFT_57312 [Aspergillus niger ATCC 1015]
Length = 474
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 184/469 (39%), Positives = 246/469 (52%), Gaps = 93/469 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL F +++GGDP K++++Q+ R+ +VD+V+ + R+ R++ N N
Sbjct: 1 MLDLADFISDRGGDPNKIKESQRKRYAPESVVDEVLSLYEEARRARYEVMQINSQLNALQ 60
Query: 62 KVIGEKMKAKEPVGD----SSTLP------------------------GNHLHPSVPVSN 93
K IG++ K KE D + L GN +H SVPVSN
Sbjct: 61 KEIGKRKKNKEDANDLMEQKANLEKSKKDAEELAIQKEKQRDSKIRTIGNIVHDSVPVSN 120
Query: 94 NEDENGIVRTKG----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED+N ++R E R SH +++T +DG DSE G V G RGY L G + L
Sbjct: 121 NEDDNAVIRKWAPDNVKVEKRNCLSHHEVLTRLDGFDSERGVKVVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L+ Y L KGY P P FM K++M + AQL QFDEELYKV +
Sbjct: 181 LALINYGLEFLWGKGYKPNQPPQFMLKDMMAKTAQLEQFDEELYKV----------TESE 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED--------------- 254
D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E
Sbjct: 231 DKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 255 --------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
LTK + Y+VV IVSGALN+AA+KK DLEAW
Sbjct: 291 FEKIEQFVLTKPEDSWQAFDEMMATSEEFYRSLGLPYQVVAIVSGALNNAASKKYDLEAW 350
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQSR L +RYG K + K +VH LNAT CAT R +C +LE
Sbjct: 351 FPFQGEYKELVSCSNCTDYQSRALEIRYGTKKATDVKKSYVHALNATLCATERTLCCVLE 410
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQ 392
+QT+ G+ +P+ LRK++P A E IP+ K P D K + KQ
Sbjct: 411 NYQTDDGIIVPEPLRKYIPG-----APEFIPYSKELPKDSTSNKNKAKQ 454
>gi|348688490|gb|EGZ28304.1| hypothetical protein PHYSODRAFT_537011 [Phytophthora sojae]
Length = 454
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 185/468 (39%), Positives = 251/468 (53%), Gaps = 95/468 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M +D++ R E+GGDP+ VR +QK RF +V++VDKVI D +WR+ + + + + N
Sbjct: 1 MPIDINRLRPERGGDPDAVRADQKKRFLDVDIVDKVIALDEQWRKKQGEVETISMKMNAL 60
Query: 61 SKVIGEKMKAKE---PVGD-----SSTLP--------------------GNHLHPSVPVS 92
+ I + KAKE + D ++ LP GN + P+VPVS
Sbjct: 61 QQEIKKLSKAKEDFKALSDERKALAAELPEKKKEADALKLLVDQELPKIGNVVDPTVPVS 120
Query: 93 NNEDENGIVRTKGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
+NEDEN +V+ G ++K + H +++ IDG + E G VAG R YFL G L+
Sbjct: 121 SNEDENIVVKKWG-APIQKDGLHFHHEVLHRIDGYEPERGVQVAGHRAYFLTGYGFLLEQ 179
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ YA S ++ Y L PFFM KE M VAQL FDE+LYKVIG+
Sbjct: 180 ALMSYATSFLMKAQYKMLKPPFFMNKEGMAAVAQLDDFDEQLYKVIGE------------ 227
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
D+KYLIATSEQPIC HR W+ E+SLP+RY G STCFR+E
Sbjct: 228 --DEKYLIATSEQPICGYHRGEWITESSLPLRYGGFSTCFRKEAGSHGKDTWGIFRVHQF 285
Query: 254 ---------DLTKSIA-------------------YRVVNIVSGALNHAAAKKLDLEAWF 285
D S+A YRVVNIVSG LN+AA KK DLEAWF
Sbjct: 286 DKVEQFCITDPESSVAMHEEMLRHAEEFYQSLNLPYRVVNIVSGELNNAAVKKYDLEAWF 345
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RELVS SNC D+QSR + +R G K+ + ++VHMLN+T CA+TR +C ILE
Sbjct: 346 PAYKEYRELVSASNCTDFQSRAMEIRCGVKKENQREKKYVHMLNSTLCASTRTVCCILEN 405
Query: 346 HQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
+Q E GV++P+ L F+ V +PF + ++ + K QK K
Sbjct: 406 YQDENGVKVPEVLVPFMGGVTY-----LPFTRDVKVNVQAVKMQKAAK 448
>gi|294896376|ref|XP_002775526.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
ATCC 50983]
gi|239881749|gb|EER07342.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
ATCC 50983]
Length = 470
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 250/475 (52%), Gaps = 88/475 (18%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF------- 53
M +D++ R EKGGDPE VR +++ R++N + V ++ D +WR+ D
Sbjct: 1 MPIDVNRLRAEKGGDPEAVRASEQKRYRNSDTVGTAVKLDQQWRKDMFALDKLREELGKI 60
Query: 54 ----------NKFKNLCSKVIGEKMKAKEPVGDSSTLP--------------GNHLHPSV 89
+K K+ C++ + K + ++ + + L GN + P V
Sbjct: 61 QKEITQKKKASKGKDPCTEELARKAEGEKKIQEQEKLVAEVAKSRDAAVHSIGNIILPDV 120
Query: 90 PVSNNEDENGIVRTKG-------DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLK 142
PVSN+ED N + + G D + H ++ M+ +D E G + G RGYFL+
Sbjct: 121 PVSNDEDNNEVYKKWGQPRQIFVDGKTPGHLYHHQIMYMLGAMDQERGINIVGHRGYFLR 180
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
G V L + L+ Y +S ++KGYT L PFFM+K++M E A+L FDE+LYKV ++
Sbjct: 181 GVGVLLNMALINYGMSLLVKKGYTALQPPFFMKKDIMAETAELGDFDEQLYKVSENSQQK 240
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
+ K+ + YLIATSEQPI A HR W+ E LP+RY G+STCFR+E
Sbjct: 241 KEEKGLKENDGEYYLIATSEQPISAYHRKEWIDEDQLPLRYAGISTCFRKEAGSHGKETW 300
Query: 254 ------------------------------DLTKS------IAYRVVNIVSGALNHAAAK 277
D+++ + YRVV IVSGALN AAAK
Sbjct: 301 GLYRIHQFEKLEQFCITTPEESVAMHEHMLDMSEEFYQSLDLPYRVVKIVSGALNDAAAK 360
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLEAWFPG ++ELVSCSNC DYQ+R + R G K+ + +VHMLN+T CAT R
Sbjct: 361 KYDLEAWFPGYNMYKELVSCSNCTDYQARAMETRCGHVKQGEREKRYVHMLNSTLCATER 420
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
+C I+E +Q E GVR+P R VP Y++ +P+VK P + +E KK +K+
Sbjct: 421 AMCCIVENYQEEEGVRVP---RVLVP--YMHGMEFLPYVKPIPKNPDEAKKAEKK 470
>gi|213410144|ref|XP_002175842.1| seryl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
gi|212003889|gb|EEB09549.1| seryl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
Length = 451
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 186/471 (39%), Positives = 249/471 (52%), Gaps = 103/471 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LF+ EKGG+PE +R++Q+ R +V +VDKVIE +W R + DN NK N
Sbjct: 1 MLDINLFQVEKGGNPELIRESQRKRGADVTVVDKVIEMYKEWVGIRFELDNVNKTTNALQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+KMKAKE D+S L GN +H SVP
Sbjct: 61 KDIGKKMKAKE---DASELLAEKAKLAAQKKELEDKETAKYKSMMSLVNTVGNIVHESVP 117
Query: 91 VSNNEDENGIVRTKG----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
VS +E+ N ++R E R SH +++T +DG D E GA ++G RGYFL+ V
Sbjct: 118 VSMDEENNELIRQWAPEGVKVEKRDCLSHHEVLTRLDGYDPERGAKISGHRGYFLRQYGV 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L + L+QY L ++GYT L P + K+VM + AQL+QFDEELYKV+ GD
Sbjct: 178 FLNLALIQYGLEFLTKRGYTALQAPTMVNKDVMAKTAQLSQFDEELYKVVD-----GD-- 230
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ------------ 252
+++YL ATSEQPI A H + W P LPI+Y G STC+R+
Sbjct: 231 ------EERYLAATSEQPISAFHSNEWFEQPAEQLPIKYAGFSTCYRREAGSHGRDAWGI 284
Query: 253 -------------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKL 279
E+ KS + YRVV IVSG LN+AAAKK
Sbjct: 285 FRVHAFEKIEQFLLTEPEKSWEAFDEMIGHAEEFYKSLELPYRVVAIVSGELNNAAAKKY 344
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLEAWFP G ++ELVSCSNC DYQSR L +R G K + ++VH LN+T CAT R I
Sbjct: 345 DLEAWFPYQGEYKELVSCSNCTDYQSRNLEIRCGVKKMGAREKKYVHCLNSTLCATERAI 404
Query: 340 CAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
C ILE +QT G+ +P L+ Y+ +PF K P + +K++K
Sbjct: 405 CCILENYQTPEGLNVPKVLQP-----YMGGKTFLPFTKELPKNSTSSKQKK 450
>gi|384495003|gb|EIE85494.1| seryl-tRNA synthetase [Rhizopus delemar RA 99-880]
Length = 443
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 191/462 (41%), Positives = 243/462 (52%), Gaps = 104/462 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++L ++GG+PE V+++Q+ R VE++D++I +W + +D NK N
Sbjct: 1 MLDINLLLEDRGGNPEAVKESQRRRGAPVEIIDEIIAEYKEWTTIQFDSDQKNKEMNALQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K IG+K KAKE D S L GN +H SVP
Sbjct: 61 KEIGKKYKAKE---DPSELLAKKAELQKSKEELVAKAKDKETSWKNKLNTLGNIVHASVP 117
Query: 91 VSNNEDENGIVRT---KGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
S +ED N I+RT G V++ SH +++T +DG D E GA VAG RGYFL
Sbjct: 118 TSMDEDNNEIIRTYFHNGVEPVKRTDILSHHEVLTRLDGYDQERGAKVAGHRGYFLTSVG 177
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
V L + L+ Y L+ GY L TPFFM KE+M + AQL+QFDEELYKV G GE
Sbjct: 178 VDLNLALISYGLNFLGRHGYKKLQTPFFMNKEMMAKTAQLSQFDEELYKVSGDGE----- 232
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED--------- 254
DKYLIATSEQPI A H W P LPI+Y G STCFR+E
Sbjct: 233 --------DKYLIATSEQPISAFHSGEWFEKPSEQLPIKYAGYSTCFRKEAGAHGKDTWG 284
Query: 255 --------------LTK----------------------SIAYRVVNIVSGALNHAAAKK 278
LT ++YRVV IVSGALN+AAAKK
Sbjct: 285 IFRVHQFEKIEQFVLTAPEKSWEMFNEMIEHSEGFFQSLGLSYRVVAIVSGALNNAAAKK 344
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLEAWFP G ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T CAT R
Sbjct: 345 YDLEAWFPYQGEYKELVSCSNCTDYQSRNLEIRCGVKKMSDREKKYVHCLNSTLCATERA 404
Query: 339 ICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+CA+LE Q E G+ IP L VP Y++ IP+VK AP
Sbjct: 405 MCALLENWQREDGLEIPPPL---VP--YMDGRTFIPYVKPAP 441
>gi|363753040|ref|XP_003646736.1| hypothetical protein Ecym_5142 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890372|gb|AET39919.1| hypothetical protein Ecym_5142 [Eremothecium cymbalariae
DBVPG#7215]
Length = 459
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 185/478 (38%), Positives = 247/478 (51%), Gaps = 110/478 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ LF EKGG+P ++K+Q+ R+ +VE+VD++I + +W + R + D NK N
Sbjct: 1 MLDITLFIAEKGGNPALIKKSQEARYASVEIVDEIIADYKEWVKTRFQLDELNKKLNKVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D S L GN +HPSV
Sbjct: 61 KEIGLKFKKKE---DPSELLIEKEKLTEEKKQLTEQEQKEDNDLRNKVNQVGNIVHPSVV 117
Query: 91 VSNNEDENGIVRT---KGDTEVRK---------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSNNED N ++R KG EV K SH +++ +DG D + G ++G RG
Sbjct: 118 VSNNEDNNELIRVWKPKGLEEVGSNASCTGNPAKLSHHEVLLRLDGYDPDRGVKISGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YF + V L L+ Y LS +GY PL P M K+ M + AQL+QFDEELYKV+
Sbjct: 178 YFFRNYGVFLNQALINYGLSFLASRGYCPLQAPVMMSKDAMSKTAQLSQFDEELYKVLD- 236
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
GD D+KYLIATSEQPI A H W P+ LP+RY+G S+CFR+
Sbjct: 237 ----GD--------DEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSCFRREAGA 284
Query: 253 ---------------------------------------EDLTKSIA--YRVVNIVSGAL 271
E+ +S+ YR+V IVSG L
Sbjct: 285 HGKDAWGVFRVHAFEKIEQFCITEPENSWEEFDRMIGASEEFYQSLGVPYRIVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
CAT R +C ILE +QTE G+ +P+ LRK++P E IPF K P + K++
Sbjct: 405 LCATQRALCCILENYQTEEGLVVPEVLRKYIPG----EPSFIPFTKELPKNSTSNKRK 458
>gi|440639607|gb|ELR09526.1| seryl-tRNA synthetase [Geomyces destructans 20631-21]
Length = 479
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 190/475 (40%), Positives = 243/475 (51%), Gaps = 99/475 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F EKGG+PE+++++Q+ R+ E+VD+VI R+ ++ A N N
Sbjct: 1 MLDVFDFIVEKGGNPEQIKESQRRRYAPEEVVDEVIVLYEDHRKTQYSATQVNTKINEIQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K IG K KAKE D+S L GN +H SVP
Sbjct: 61 KQIGAKKKAKE---DASELMAQKLELEKEKKAKIELAGEKDVALKKKIATIGNIVHESVP 117
Query: 91 VSNNEDENGIVRTKG----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
V NNED N +R E R SH +++T +DG D E G V G RGYFL+ V
Sbjct: 118 VHNNEDNNVELRAWAPEGFSVEKRDVLSHHEVLTRLDGYDPERGVKVVGHRGYFLRNWGV 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L ++ Y L E+GYT L P FM KE M + AQL QFDEELYKV+
Sbjct: 178 FLNQAMINYGLQFLSERGYTALQAPQFMLKEYMAKTAQLEQFDEELYKVV---------- 227
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------- 252
+ D +DKYLIATSEQPI A H D W+ LPI+Y G STC+R+
Sbjct: 228 -DGDAQNDKYLIATSEQPISAFHADEWIMNKELPIKYAGFSTCYRREAGSHGRDAWGIFR 286
Query: 253 -----------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDL 281
ED KS+ YRV IVSGALN+AAAKK DL
Sbjct: 287 VHQFEKVEQFVLTDPEKSWEAFEDMITVSEDFYKSLGVPYRVAAIVSGALNNAAAKKYDL 346
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP G ++ELVSCSNC DYQSR L +R+G + + K ++VH LN+T CAT R +C
Sbjct: 347 EAWFPFQGEYKELVSCSNCTDYQSRALEIRFGNKLQTDVKKKYVHALNSTLCATERALCC 406
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK-KQKKQKEG 395
+LE QTE G +P+ LRK++P + IPF K P D K K K +K G
Sbjct: 407 LLENFQTEDGFTVPEPLRKYLP----DAPDFIPFTKELPKDSTSQKAKAKAEKSG 457
>gi|367037535|ref|XP_003649148.1| hypothetical protein THITE_2141035 [Thielavia terrestris NRRL 8126]
gi|346996409|gb|AEO62812.1| hypothetical protein THITE_2141035 [Thielavia terrestris NRRL 8126]
Length = 444
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 193/456 (42%), Positives = 238/456 (52%), Gaps = 99/456 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F TE+GG+PE +R++Q+ R+ +VE VD+VI R+ + A N N
Sbjct: 1 MLDVNDFITERGGNPELIRESQRKRYASVEAVDEVIAMFEDHRRTAYSATQINARINEVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG K KAKE V D GN +H SVPVS+
Sbjct: 61 KQIGPKKKAKEDVTDLLKQKADLEKEKKDLLALAAEKEKLLKAKVKTIGNIVHESVPVSD 120
Query: 94 NEDENGIVRTKGDT----EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N + RT E R SH +++ +DG D E G V G RGYFL+ V L
Sbjct: 121 NEDNNRVERTWAPEGVLFEKRNVLSHHEVLDRLDGYDPERGVKVVGHRGYFLRRWGVFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ Y L ++GY PL TP M ++ M + AQL+QFDEELYKV GD A
Sbjct: 181 QALINYGLEFLNDRGYVPLQTPQLMLRDQMAKTAQLSQFDEELYKV------TGDQA--- 231
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------D 254
DKYLIATSEQPI A H + WL LP++Y G STCFR+E +
Sbjct: 232 ----DKYLIATSEQPISAYHSEEWLQPKDLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHE 287
Query: 255 LTK------------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
TK I YRVV IVSGAL AKKLDLEAW
Sbjct: 288 FTKVEQFCITDPEKSWEMFENMIATSEEFYKSLGIPYRVVAIVSGALT---AKKLDLEAW 344
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G F+ELVSCSNC DYQSR L +R+G K+ + K +VH LN+T CATTR ICAILE
Sbjct: 345 FPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLCATTRTICAILE 404
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTA 379
QTE GV IP+ LRK++P A E +PF K A
Sbjct: 405 NFQTEDGVNIPEPLRKYLPG-----APEFLPFAKPA 435
>gi|119498645|ref|XP_001266080.1| seryl-tRNA synthetase [Neosartorya fischeri NRRL 181]
gi|119414244|gb|EAW24183.1| seryl-tRNA synthetase [Neosartorya fischeri NRRL 181]
Length = 474
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 183/469 (39%), Positives = 245/469 (52%), Gaps = 93/469 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL F +++GG+P K++++Q+ RF +VD+VI + R+ R++ N
Sbjct: 1 MLDLADFVSDRGGNPNKIKESQRKRFAPENVVDEVITLYEEARRARYEVMQIGSELNALQ 60
Query: 62 KVIGEKMKAKEPVG----DSSTLP------------------------GNHLHPSVPVSN 93
K IG++ K KE G + L GN++H SVPVSN
Sbjct: 61 KEIGKRKKNKEDAGVLMEQKAALEKRKKEAEEHASEQESRRDRKIRTIGNYVHESVPVSN 120
Query: 94 NEDENGIVRTKGDTEV----RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED+N +VRT V R SH +++T +DG DSE G + G RGY L G + L
Sbjct: 121 NEDDNVVVRTWAPENVVVEKRNCLSHHEVLTRLDGYDSERGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L+ Y L KGY P P FM KE+M + AQL QFDEELYKV
Sbjct: 181 LALINYGLEFLWRKGYKPNQPPQFMLKELMAKTAQLEQFDEELYKV----------TESD 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED--------------- 254
D+ DKYLIATSEQP+ A+H W+ + LPI+Y G STC+R+E
Sbjct: 231 DKSTDKYLIATSEQPLSALHDGEWIQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 255 --------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
LTK + Y+VV IVSGALN+AA+KK DLEAW
Sbjct: 291 FEKVEQFVLTKPENSWQVFEEMMATSEEFYQSLGLPYQVVAIVSGALNNAASKKYDLEAW 350
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +RYG K + K +VH LNAT CAT R +C ILE
Sbjct: 351 FPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCCILE 410
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQ 392
+QT+ G +P+ LRK++P A E +P+ K P D K + +Q
Sbjct: 411 NYQTDDGFNVPEALRKYIPG-----APEFLPYTKDLPKDTTSHKSKSRQ 454
>gi|50303053|ref|XP_451464.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640595|emb|CAH03052.1| KLLA0A10593p [Kluyveromyces lactis]
Length = 459
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 184/475 (38%), Positives = 245/475 (51%), Gaps = 104/475 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F EKGG+PE +RK+Q R +VE+VD++I +W + R + D NK N
Sbjct: 1 MLDITQFIEEKGGNPELIRKSQIARGASVEIVDEIIAGYKEWVKTRFQVDELNKQLNKVQ 60
Query: 62 KVIGEKMKAKEP-----------VGDSSTLP-----------------GNHLHPSVPVSN 93
K IG K K KE V + L GN +HPSV VSN
Sbjct: 61 KEIGLKFKNKEDASELLAEKDRIVAEKKVLSEREQEEDKQLRSKVNQVGNIVHPSVVVSN 120
Query: 94 NEDENGIVRT------------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E+ N +VR+ T K SH +++ +DG D E G + G RGYF
Sbjct: 121 DEENNELVRSWMPENIKEVAQVATATGAEAKLSHHEILLRLDGYDPERGVKITGHRGYFF 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y LS KGYTPL P M K+VM + AQL++FDEELYKV+
Sbjct: 181 RNYGVFLNQALINYGLSFLASKGYTPLQAPVMMNKDVMAKTAQLSEFDEELYKVLD---- 236
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED----- 254
GD D+KYLIATSEQPI A H W P+ LP+RY+G S+CFR+E
Sbjct: 237 -GD--------DEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSCFRREAGSHGK 287
Query: 255 ------------------LTK----------------------SIAYRVVNIVSGALNHA 274
LT+ + YRVV IVSG LN+A
Sbjct: 288 DAWGVFRVHAFEKIEQFVLTEPEKSWEEFDKMINYSEEFYQSLGLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T CA
Sbjct: 348 AAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T R +C +LE +QT+ G+++P+ LRK++P E +P+VK P + KK+
Sbjct: 408 TQRALCCVLENYQTDEGLKVPEVLRKYIPG----EPEFLPYVKELPKNSTSNKKK 458
>gi|366998363|ref|XP_003683918.1| hypothetical protein TPHA_0A04080 [Tetrapisispora phaffii CBS 4417]
gi|357522213|emb|CCE61484.1| hypothetical protein TPHA_0A04080 [Tetrapisispora phaffii CBS 4417]
Length = 458
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 191/476 (40%), Positives = 248/476 (52%), Gaps = 106/476 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+PE +R++QK R NVELVD++I + W + R D NK N
Sbjct: 1 MLDINQFIVEKGGNPELIRESQKARHANVELVDEIIADYKDWVKTRFDLDELNKKLNKLQ 60
Query: 62 KVIGEKMKAKE----------------------------PVGDSSTLPGNHLHPSVPVSN 93
K IG K K KE + + GN +HPSV +SN
Sbjct: 61 KDIGLKFKNKEDATELLAEKDQITEEKKNLTEKEQEEDKALRNKVNQIGNIVHPSVVISN 120
Query: 94 NEDENGIVRT---KGDTEV---------RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E+ N +VRT +G +V SH +++ +DG D E G ++G RGYF
Sbjct: 121 DEENNELVRTWKPEGLEDVGPVASVTGKPAALSHHEVLLRLDGYDPERGVKISGHRGYFF 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y L+ +KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 181 RNYGVFLNQALINYGLNFLAQKGYIPLQAPVMMNKEVMAKTAQLSQFDEELYKVID---- 236
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ------- 252
GD D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+
Sbjct: 237 -GD--------DEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGSHGK 287
Query: 253 --------------------------EDLTKSI------------AYRVVNIVSGALNHA 274
E+ K I YRVV IVSG LN+A
Sbjct: 288 DAWGVFRVHAFEKIEQFVITEPEKSWEEFDKMIDASEEFYQSLKLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEK-IEFVHMLNATAC 333
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G KKM+E+ ++VH LN+T
Sbjct: 348 AAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCG-IKKMSEREKKYVHCLNSTLA 406
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
AT R +C +LE +QTE G+ IP+ LRK++P E +PFVK P + KK+
Sbjct: 407 ATQRALCCVLENYQTEDGLVIPEVLRKYIPG----EPEFLPFVKELPKNSTSNKKK 458
>gi|336472324|gb|EGO60484.1| seryl-tRNA synthetase [Neurospora tetrasperma FGSC 2508]
gi|350294458|gb|EGZ75543.1| seryl-tRNA synthetase [Neurospora tetrasperma FGSC 2509]
Length = 494
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 194/473 (41%), Positives = 242/473 (51%), Gaps = 107/473 (22%)
Query: 10 TEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMK 69
E+GG+PEK+R++Q+ RF VE+VD+VI R+ + A N N K I K K
Sbjct: 28 AERGGNPEKIRESQRKRFAPVEVVDEVIALWEDHRKTAYSAMQLNAKINEIQKQIAPKKK 87
Query: 70 AKEPVGDSSTLP--------------------------------------GNHLHPSVPV 91
A P ++ GN +H SVPV
Sbjct: 88 AYNPYPSTTIAKEDVSDLLKQKADLEKEKKDLLDSAAEKEKLLKVKVKTIGNLVHDSVPV 147
Query: 92 SNNEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
SNNED N + RT +G T E + SH +++ +DG D E G V G RGYFLK V
Sbjct: 148 SNNEDNNTVERTWAPEGVTFEKKDVLSHHEVLRKLDGYDPERGVKVVGHRGYFLKKWGVF 207
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L ++ Y L E+ YTPL TP M ++ M + AQL+QFDEELYKV GD A
Sbjct: 208 LNQAIINYGLEFLSEREYTPLQTPQLMLRDQMAKTAQLSQFDEELYKV------TGDQA- 260
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------- 253
DKYLIATSEQPI A H D WL LP++Y G STCFR+E
Sbjct: 261 ------DKYLIATSEQPISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGAHGKDVWGIFRV 314
Query: 254 -DLTK------------------------------SIAYRVVNIVSGALNHAAAKKLDLE 282
+ TK I YRVV IVSGALN+AAAKKLDLE
Sbjct: 315 HEFTKVEQFCITEPEKSWEMFEHMISNSEAFYQSLGIPYRVVAIVSGALNNAAAKKLDLE 374
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
AWFP G F+ELVSCSNC DYQSR L +R+G K+ + K +VH LN+T ATTR ICAI
Sbjct: 375 AWFPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLTATTRTICAI 434
Query: 343 LETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEG 395
LE QT GV++P+ LRK++P G F+ AP +E K+ K K+G
Sbjct: 435 LENFQTPEGVKVPEPLRKYLP-------GAPEFIPFAPEPVKEVKEGKSGKKG 480
>gi|355745502|gb|EHH50127.1| hypothetical protein EGM_00903, partial [Macaca fascicularis]
Length = 368
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 170/377 (45%), Positives = 221/377 (58%), Gaps = 88/377 (23%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--------- 51
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ + +AD
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCKFRADNLNKLKNLC 60
Query: 52 ----------------------NFNKFKNLCSKVIG-----------------------E 66
N F +L + + E
Sbjct: 61 SKTIGEKMKKKEPVEDDESVPENVLNFDDLTADALANLKVSQIKKVRLLIDEAILKCEAE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVD 126
++K + ++ GN LHPSVP+SN++ +N + R GD VRKKYSHVDL+ M+DG +
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDDADNKVERIWGDCTVRKKYSHVDLVVMVDGFE 180
Query: 127 SEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLA 186
E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL+
Sbjct: 181 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLS 240
Query: 187 QFDEELYKVIGKGEKVGDSAPEKDELDDKY--LIATSEQPICAVHRDSWLPEASLPIRYL 244
QFDEELYKVI E+ S+P ++ + + +I T+E+
Sbjct: 241 QFDEELYKVI---EQFVYSSPHDNKSWEMFEEMITTAEE--------------------- 276
Query: 245 GVSTCFRQEDLTKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQ 304
F Q + I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ
Sbjct: 277 -----FYQ---SLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQ 328
Query: 305 SRRLLVRYGQTKKMNEK 321
+RRL +RYGQTKKM +K
Sbjct: 329 ARRLRIRYGQTKKMMDK 345
>gi|448083806|ref|XP_004195447.1| Piso0_004834 [Millerozyma farinosa CBS 7064]
gi|359376869|emb|CCE85252.1| Piso0_004834 [Millerozyma farinosa CBS 7064]
Length = 460
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 187/480 (38%), Positives = 250/480 (52%), Gaps = 110/480 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGGDP+K++++Q+ R +VELVD++IE+ W + R D NK N
Sbjct: 1 MLDINAFLAEKGGDPQKIKESQRKRGASVELVDEIIEDYKAWTKIRFDLDAVNKNLNGLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+K KAKE D+S L GN +H SV
Sbjct: 61 KEIGQKFKAKE---DASALLAKKDELVAEKKAITEKEQNADTELRFKVNQIGNIVHESVV 117
Query: 91 VSNNEDENGIVRT---KGDTEVRK---------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
S +E+ N +++T +G +EV K SH +++ +DG D + G V G RG
Sbjct: 118 DSLDEENNELIKTWAPEGVSEVGSTATATGAPAKLSHHEVLLRLDGYDPDRGVKVVGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFL+ V L L+QY LS + YTPL P M K++M + AQL+QFDEELYKVI
Sbjct: 178 YFLRNHGVFLNQALIQYGLSFLAKHEYTPLQAPVMMNKDIMAKTAQLSQFDEELYKVI-- 235
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
D D+KY+IATSEQPI A H W P+ LP+RY G S+CFR+
Sbjct: 236 -----------DGEDEKYMIATSEQPISAYHSGEWFESPQEQLPVRYAGFSSCFRREAGS 284
Query: 253 ---------------------------------------EDLTKSIA--YRVVNIVSGAL 271
E+ KS+ YRVV IVSG L
Sbjct: 285 HGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGAAEEFYKSLGLPYRVVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
AT R +C ILE +Q + G+ IP+ LRK++P E IPF+K P + TKK KK
Sbjct: 405 LSATQRALCCILENYQKDDGLVIPEVLRKYIPG----EPSFIPFLKDLPKNSTSTKKNKK 460
>gi|149245668|ref|XP_001527311.1| seryl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
gi|146449705|gb|EDK43961.1| seryl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
Length = 461
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 189/479 (39%), Positives = 242/479 (50%), Gaps = 110/479 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGGDPEK++ +QK R +VELVD+++++ +W + R D NK N
Sbjct: 1 MLDVNAFIVEKGGDPEKIKISQKKRGASVELVDEIVKDYKEWVRIRFDLDETNKKLNAVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+K KAKE D+S L GN +H SV
Sbjct: 61 KEIGKKFKAKE---DASELIKTKEELSAQKKLLIETEATADKDLRYKVNQVGNIVHDSVV 117
Query: 91 VSNNEDENGIVRT------------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRG 138
S +E N +++T T SH +++ +DG D E G + G RG
Sbjct: 118 DSQDEANNDLIKTWLPKDYEKTAQVAAGTNAPASLSHHEVLLRLDGYDPERGVRIVGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFL+ V L L+ Y LS KGYTPL P M KEVM + AQL+QFDEELYKVI
Sbjct: 178 YFLRNVGVWLNQALINYGLSFLHSKGYTPLQAPVMMNKEVMAKTAQLSQFDEELYKVI-- 235
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
D D+KYLIATSEQPI A H W P+ LPIRY G S+CFR+
Sbjct: 236 -----------DGEDEKYLIATSEQPISAYHAGEWFESPQEQLPIRYAGYSSCFRREAGS 284
Query: 253 ---------------------------------------EDLTKSIA--YRVVNIVSGAL 271
ED +S+ YRVV IVSG L
Sbjct: 285 HGKDAWGIFRVHAFEKIEQFVLTEPDKSWEEFDRMIGASEDFYQSLGLPYRVVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
AT R IC ILE +Q E G+ IP+ LRK++P E +PFVK P + KK K
Sbjct: 405 LSATERTICCILENYQKEDGLVIPEVLRKYIPG----EPEFVPFVKELPKNSTSQKKAK 459
>gi|301117600|ref|XP_002906528.1| seryl-tRNA synthetase [Phytophthora infestans T30-4]
gi|262107877|gb|EEY65929.1| seryl-tRNA synthetase [Phytophthora infestans T30-4]
Length = 454
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/468 (39%), Positives = 254/468 (54%), Gaps = 95/468 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M +D++ R E+GGDP+ VR QK R +V++V+KVIE D +WR+ + + + + N
Sbjct: 1 MPIDINRLRPERGGDPDAVRAEQKKRSLDVDIVNKVIELDEQWRKKQGEVETISMKMNAL 60
Query: 61 SKVIGEKMKAKE---PVGD-----SSTLP--------------------GNHLHPSVPVS 92
+ I + KAKE + D +++LP GN + P+VP+S
Sbjct: 61 QQEIKKLSKAKEDFKALSDERKELAASLPEKKKEADALKELVDKELPKIGNTVDPTVPIS 120
Query: 93 NNEDENGIVRTKGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
NNED+N +V+T G + ++K + H +++ IDG + E G VAG R YFL G L+
Sbjct: 121 NNEDDNVVVKTWG-SPIQKDGLHFHHEVLHRIDGYEPERGVQVAGHRAYFLTGYGFLLEQ 179
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ YA + ++ Y L PFFM KE M VAQL FDE+LYKVIG+
Sbjct: 180 ALMAYATAFLMKAQYKMLKPPFFMNKEGMAAVAQLDDFDEQLYKVIGE------------ 227
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
D+KYLIATSEQPIC H+ W+ E+SLP+RY G STCFR+E
Sbjct: 228 --DEKYLIATSEQPICGYHKGEWITESSLPLRYGGFSTCFRKEAGSHGKDTWGIFRVHQF 285
Query: 254 ---------DLTKSIA-------------------YRVVNIVSGALNHAAAKKLDLEAWF 285
D S A YRVVNIVSG LN+AA KK DLEAWF
Sbjct: 286 DKMEQFCITDPESSAAMHEEMLRHAEEFYQSLNLPYRVVNIVSGELNNAAVKKYDLEAWF 345
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RELVS SNC D+QSR + +R G K+ + ++VHMLN+T CA+TR +C ILE
Sbjct: 346 PAYKEYRELVSASNCTDFQSRAMEIRCGVKKENQREKKYVHMLNSTLCASTRTVCCILEN 405
Query: 346 HQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
Q E GV++P+ L VP ++ A +PF + ++ + TK QK K
Sbjct: 406 FQDENGVKVPEVL---VP--FMGGATYLPFTREVKVNLQATKMQKAAK 448
>gi|294953303|ref|XP_002787696.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
ATCC 50983]
gi|239902720|gb|EER19492.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
ATCC 50983]
Length = 470
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 248/475 (52%), Gaps = 88/475 (18%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF------- 53
M +D++ R EKGGDPE VR +++ R++N + V +E D +WR+ D
Sbjct: 1 MPIDINKLRAEKGGDPEAVRASEQKRYRNSDTVGNAVELDQQWRKDMFALDKLREELGKI 60
Query: 54 ----------NKFKNLCSKVIGEKMKAKEPVGDSSTLP--------------GNHLHPSV 89
+K K+ C++ + K + ++ + + L GN + P V
Sbjct: 61 QKEITQKKKASKGKDPCTEELVRKAEGEKKIQEQEKLVAEVAKSRDAAVHSIGNIILPDV 120
Query: 90 PVSNNEDENGIVRTKG-------DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLK 142
PV N+ED N + + G D + H ++ M+ +D E G + G RGYFL+
Sbjct: 121 PVGNDEDNNEVYKKWGQPRQILVDGKTPGHLYHHQIMYMLGAMDQERGINIVGHRGYFLR 180
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
G V L + L+ Y +S ++KGYT L PFFM+K++M E A+L FDE+LYKV ++
Sbjct: 181 GVGVLLNMALINYGMSLLVKKGYTALQPPFFMKKDIMAETAELGDFDEQLYKVSENSQQK 240
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
+ K+ + YLIATSEQPI A HR W+ E LP+RY G+STCFR+E
Sbjct: 241 KEEKGLKENDGEYYLIATSEQPISAYHRKEWIDEDQLPLRYAGISTCFRKEAGSHGKETW 300
Query: 254 ------------------------------DLTKS------IAYRVVNIVSGALNHAAAK 277
D+ + + YRVV IVSGALN AAAK
Sbjct: 301 GLYRIHQFEKLEQFCITTPEESVAMHEHMLDMAEEFYQSLDLPYRVVKIVSGALNDAAAK 360
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLEAWFPG ++ELVSCSNC DYQ+R + R G K+ + +VHMLN+T CAT R
Sbjct: 361 KYDLEAWFPGYNMYKELVSCSNCTDYQARAMETRCGHVKQGEREKRYVHMLNSTLCATER 420
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
+C I+E +Q E GVR+P R VP ++ E +P+VK P + +E KK +K+
Sbjct: 421 AMCCIVENYQEEEGVRVP---RVLVPFMHGMEF--LPYVKPVPKNPDEGKKAEKK 470
>gi|448079227|ref|XP_004194346.1| Piso0_004834 [Millerozyma farinosa CBS 7064]
gi|359375768|emb|CCE86350.1| Piso0_004834 [Millerozyma farinosa CBS 7064]
Length = 460
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 187/480 (38%), Positives = 249/480 (51%), Gaps = 110/480 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGGDP+K++++Q+ R +VELVD++I + W + R D NK N
Sbjct: 1 MLDINAFLAEKGGDPQKIKESQRKRGASVELVDEIIADYKAWTKIRFDLDAVNKNLNGLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+K KAKE D+S L GN +H SV
Sbjct: 61 KEIGQKFKAKE---DASALLAKKDELVAEKKAITEKEQNADTELRFKVNQVGNIVHESVV 117
Query: 91 VSNNEDENGIVRT---KGDTEVRK---------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
S +E+ N +++T +G +EV K SH +++ +DG D + G V G RG
Sbjct: 118 DSLDEENNELIKTWAPEGVSEVGSTATATGAPAKLSHHEVLLRLDGYDPDRGVKVVGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFL+ V L L+QY LS + YTPL P M K++M + AQL+QFDEELYKVI
Sbjct: 178 YFLRNYGVFLNQALIQYGLSFLAKHKYTPLQAPVMMNKDIMAKTAQLSQFDEELYKVI-- 235
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
D D+KY+IATSEQPI A H W P+ LP+RY G S+CFR+
Sbjct: 236 -----------DGEDEKYMIATSEQPISAYHSGEWFESPQEQLPVRYAGFSSCFRREAGS 284
Query: 253 ---------------------------------------EDLTKSIA--YRVVNIVSGAL 271
E+ KS+ YRVV IVSG L
Sbjct: 285 HGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGVAEEFYKSLGLPYRVVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
AT R +C ILE +Q E G+ IP+ LRK++P E IPF+K P + TKK KK
Sbjct: 405 LSATQRALCCILENYQKEDGLVIPEVLRKYIPG----EPSFIPFIKDLPKNSTSTKKTKK 460
>gi|70998718|ref|XP_754081.1| seryl-tRNA synthetase [Aspergillus fumigatus Af293]
gi|66851717|gb|EAL92043.1| seryl-tRNA synthetase [Aspergillus fumigatus Af293]
gi|159126185|gb|EDP51301.1| seryl-tRNA synthetase [Aspergillus fumigatus A1163]
Length = 474
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/469 (39%), Positives = 245/469 (52%), Gaps = 93/469 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL F +++GG+P K++++Q+ RF +VD+VI + R+ R++ N
Sbjct: 1 MLDLADFVSDRGGNPNKIKESQRKRFAPENVVDEVIALYEEARRARYEVMQIGSELNALQ 60
Query: 62 KVIGEKMKAKEPVG----DSSTLP------------------------GNHLHPSVPVSN 93
K IG++ K KE G + L GN++H SVPVSN
Sbjct: 61 KEIGKRKKNKEDAGVLMEQKAALEKRKKEAEEHASEQESRRDRKIRTIGNYVHESVPVSN 120
Query: 94 NEDENGIVRTKGDTEV----RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED+N +VRT V R SH +++T +DG DSE G + G RGY L G + L
Sbjct: 121 NEDDNVVVRTWAPENVLVEKRNCLSHHEVLTRLDGYDSERGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L+ Y L KGY P P FM KE+M + AQL QFDEELYKV
Sbjct: 181 LALINYGLEFLWRKGYKPNQPPQFMLKELMAKTAQLEQFDEELYKV----------TESD 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED--------------- 254
D+ DKYLIATSEQP+ A+H W+ + LPI+Y G STC+R+E
Sbjct: 231 DKSTDKYLIATSEQPLSALHDGEWIQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 255 --------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
LTK + Y+VV IVSGALN+AA+KK DLEAW
Sbjct: 291 FEKVEQFVLTKPENSWQVFEEMMATSEEFYQSLGLPYQVVAIVSGALNNAASKKYDLEAW 350
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +RYG K + K +VH LNAT CAT R +C ILE
Sbjct: 351 FPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCCILE 410
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQ 392
+QT+ G +P+ LRK++P A E +P+ K P D K + +Q
Sbjct: 411 NYQTDDGFNVPEPLRKYIPG-----APEFLPYTKDLPKDTTSHKSKSRQ 454
>gi|16648024|gb|AAL25277.1| GH04194p [Drosophila melanogaster]
Length = 272
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 156/258 (60%), Positives = 181/258 (70%), Gaps = 54/258 (20%)
Query: 174 MRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 233
MRKEVMQEVAQL+QFDEELYKV+GKG + E+ +D+KYLIATSEQPI A HRD W
Sbjct: 1 MRKEVMQEVAQLSQFDEELYKVVGKGSEKA----EEVGIDEKYLIATSEQPIAAYHRDEW 56
Query: 234 LPEASLPIRYLGVSTCFRQED-----------------------LTK------------- 257
LPE+SLPI+Y G+STCFRQE LT
Sbjct: 57 LPESSLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEM 116
Query: 258 -----------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSR 306
I YRVVNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+R
Sbjct: 117 IGNAEQFCQSLGIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQAR 176
Query: 307 RLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVY 366
RLLVR+GQTKKMN +++VHMLNAT CA TRVICAILETHQTETG+++P+ L+K++PA +
Sbjct: 177 RLLVRFGQTKKMNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKF 236
Query: 367 VNEAGEIPFVKTAPIDEE 384
+E IPFVK APID E
Sbjct: 237 QDE---IPFVKPAPIDLE 251
>gi|45185142|ref|NP_982859.1| ABL088Cp [Ashbya gossypii ATCC 10895]
gi|44980778|gb|AAS50683.1| ABL088Cp [Ashbya gossypii ATCC 10895]
gi|374106061|gb|AEY94971.1| FABL088Cp [Ashbya gossypii FDAG1]
Length = 459
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 184/475 (38%), Positives = 245/475 (51%), Gaps = 104/475 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ LF EKGG+P+ ++K+Q+ R VE+VD++I + +W + R + D NK N
Sbjct: 1 MLDITLFIEEKGGNPDLIKKSQQARNAPVEIVDEIISDYKEWVKTRFQLDELNKAFNKVQ 60
Query: 62 KVIGEKMKAKEPVG----------------------------DSSTLPGNHLHPSVPVSN 93
K IG+K K KE D GN +HPSV VSN
Sbjct: 61 KEIGQKFKNKEDASELLAQKERMTEEKKQLIEQEQEQDKALRDKVNRVGNIVHPSVVVSN 120
Query: 94 NEDENGIVRT---KGDTEVRK---------KYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E N +VRT +G +EV K SH +++ +DG D E G ++G RGYF
Sbjct: 121 DEANNELVRTWRPEGLSEVGTTASCTGQPAKLSHHEVLLRLDGYDPERGVKISGHRGYFF 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y LS KGY PL P M KEVM + AQL+QFDEELYKV+
Sbjct: 181 RNYGVFLNQALINYGLSFLAAKGYCPLQAPVMMNKEVMAKTAQLSQFDEELYKVM----- 235
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ------- 252
D D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+
Sbjct: 236 --------DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGAHGK 287
Query: 253 ------------------------------------EDLTKS--IAYRVVNIVSGALNHA 274
E+ +S I YR+V IVSG LN+A
Sbjct: 288 DAWGVFRVHAFEKIEQFCITEPEKSWEEFDSMIANSEEFYQSLGIPYRIVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T A
Sbjct: 348 AAKKYDLEAWFPYQQEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T R +C +LE +QTE G+ +P+ LRK++P E IP+ K P + K++
Sbjct: 408 TQRALCCLLENYQTEDGLVVPEVLRKYIPG----EPEFIPYSKELPKNSTSNKRK 458
>gi|406860491|gb|EKD13549.1| seryl-tRNA synthetase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 486
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 199/480 (41%), Positives = 249/480 (51%), Gaps = 102/480 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F EKGGDPEK++++Q+ R E VD+VI R+ ++ A N N
Sbjct: 1 MLDVFDFIKEKGGDPEKIKESQRRRCAPEEAVDEVISLYEDHRKTQYAATQVNTKINDTQ 60
Query: 62 KVIGEKMKAKEPVGD-----------SSTLP-----------------GNHLHPSVPVSN 93
K IG K KAKE D TL GN +H SVPVS+
Sbjct: 61 KQIGVKRKAKENADDLMKAKADFEKEKKTLVELAAEKELVLKKKIGTIGNIVHDSVPVSD 120
Query: 94 NEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N +R +G T E R SH +++T +DG D E G V G RGYFL+ V L
Sbjct: 121 NEDHNAELRKWAPEGITVEKRDVLSHHEVLTRLDGYDPERGVKVVGHRGYFLRKWGVFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ Y L KGYTPL TP FM KE M + AQL QFDEELYKV+ +
Sbjct: 181 QALINYGLEFLDSKGYTPLQTPQFMLKEYMAKTAQLEQFDEELYKVV-----------DG 229
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D +DKYLIATSEQPI A H D WL LPI+Y G S+C+R+E
Sbjct: 230 DAQNDKYLIATSEQPISAFHADEWLVPKELPIKYAGFSSCYRREAGSHGRDAWGIFRVHQ 289
Query: 254 ----------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDLEAW 284
D KS + YRVV IVSGALN+AAAKK DLEAW
Sbjct: 290 FEKIEQFVLTDPEKSWEMFDEMIAFSEEFYKSLGVPYRVVAIVSGALNNAAAKKYDLEAW 349
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQSR L +RYG + + ++VH LN+T CAT R +C +LE
Sbjct: 350 FPFQGEYKELVSCSNCTDYQSRALEIRYGTKLQTEIRKKYVHALNSTLCATERALCCLLE 409
Query: 345 THQTE-----TGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQKEGMKK 398
QTE G ++P+ LRK++P A E +PF K P D T QK + +G K+
Sbjct: 410 NFQTEEACAPAGFKVPEPLRKYLPG-----APEFLPFTKELPKD---TTSQKAKAKGGKE 461
>gi|389623987|ref|XP_003709647.1| seryl-tRNA synthetase [Magnaporthe oryzae 70-15]
gi|351649176|gb|EHA57035.1| seryl-tRNA synthetase [Magnaporthe oryzae 70-15]
Length = 497
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 186/460 (40%), Positives = 249/460 (54%), Gaps = 96/460 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL- 59
MVLD+ F TE+GG+PEK+R++Q+ R VE+VD++I R+ ++ A N N
Sbjct: 1 MVLDVTDFITERGGNPEKIRESQRRRHAPVEVVDEIIAMWDDHRRTQYAATQMNAQINDV 60
Query: 60 -------------CSKVIGEKM---KAKEPVGDSS-----------TLPGNHLHPSVPVS 92
S+ + EK+ KAK+ + DS+ T GN +H SVPVS
Sbjct: 61 QKKIGAKKKAKEDASEFLQEKIALEKAKKELIDSAAEKQKILDKKLTTIGNIVHDSVPVS 120
Query: 93 NNEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
+NED N I+RT +G T E R+ SH +++T +DG D + G G RGYFL+ V L
Sbjct: 121 DNEDNNEIIRTYCPEGLTVEKRECLSHHEVLTRLDGYDPDRGIKAVGHRGYFLRQWGVFL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
++ + L K + PL PFF+ K+ M + AQL QFDEELYKV+
Sbjct: 181 NQAIINFGLEFLSSKSFVPLQPPFFLLKDQMSKTAQLEQFDEELYKVV------------ 228
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---------------- 252
D DKYLIATSEQPI H + WL LP+RY G STCFR+
Sbjct: 229 -DGEADKYLIATSEQPISVYHANEWLLPQDLPLRYAGYSTCFRKEAGGHGRDVWGTFRVH 287
Query: 253 ---------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEA 283
E+ K++ YR+V IVSGALN+AAAKK DLEA
Sbjct: 288 QFEKVEQFCITEPEKSWEMFDEMIANSEEFYKALGLPYRIVAIVSGALNNAAAKKFDLEA 347
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFP G ++ELVSCSNC DYQSR L +R+G + + K E+VH LN+T AT+R +CA+L
Sbjct: 348 WFPFQGEYKELVSCSNCTDYQSRSLEIRFGTKTQTSTKKEYVHCLNSTLTATSRTMCALL 407
Query: 344 ETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPID 382
E +QTE G ++P+ LRK++P A E IPF K P D
Sbjct: 408 ENYQTEDGFKVPEPLRKYLPG-----APEFIPFTKELPKD 442
>gi|115438574|ref|XP_001218101.1| seryl-tRNA synthetase [Aspergillus terreus NIH2624]
gi|114188916|gb|EAU30616.1| seryl-tRNA synthetase [Aspergillus terreus NIH2624]
Length = 473
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 181/463 (39%), Positives = 239/463 (51%), Gaps = 91/463 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL F +++GG+P K++++Q+ RF E+VD+VI R+ R++ N
Sbjct: 1 MLDLADFISDRGGNPNKIKESQRKRFAPEEVVDEVIALYEAARRARYEVTQIGSQLNAVQ 60
Query: 62 KVIGEKMKAKEPV----------------GDSSTLP------------GNHLHPSVPVSN 93
K IG+K K KE D L GN++H SVPVSN
Sbjct: 61 KEIGQKKKNKEDATELIEKKAALEKSKKEADELALQKEAERDSKVRGIGNYVHESVPVSN 120
Query: 94 NEDENGIVRT----KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
ED+N IV+T E R SH +++T +DG D G + G RGY L G + L
Sbjct: 121 TEDDNVIVKTWAPEATTVEKRDCLSHHEVLTRLDGYDPARGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV Y L +KGYTP P FM KE+M + AQL QFDEELYKV
Sbjct: 181 LALVNYGLEFLFKKGYTPNQPPQFMLKEMMAKTAQLEQFDEELYKV----------TESD 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+
Sbjct: 231 DKSTDKYLIATSEQPLSALHDSEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 253 --------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAW 284
E+ +S+ Y++V IVSGALN+AA+KK DLEAW
Sbjct: 291 FEKIEQFVITNPEKSWEAFEEMMATSEEFYQSLGLPYQIVAIVSGALNNAASKKYDLEAW 350
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +RYG K+ + K +VH LNAT CAT R +C ILE
Sbjct: 351 FPFQGEYKELVSCSNCTDYQARALEIRYGIKKQTDAKKTYVHALNATLCATERTLCCILE 410
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 387
+QTE G +P+ LRK++P +PF K P D K
Sbjct: 411 NYQTEEGFIVPEPLRKYIPG----SPEFLPFTKELPKDSTSQK 449
>gi|67903760|ref|XP_682136.1| hypothetical protein AN8867.2 [Aspergillus nidulans FGSC A4]
gi|40740965|gb|EAA60155.1| hypothetical protein AN8867.2 [Aspergillus nidulans FGSC A4]
gi|259482913|tpe|CBF77842.1| TPA: seryl-tRNA synthetase (AFU_orthologue; AFUA_5G05490)
[Aspergillus nidulans FGSC A4]
Length = 474
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 185/471 (39%), Positives = 246/471 (52%), Gaps = 99/471 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL F T++GGDP K++++Q+ R VD+VI + R+ R++ N N
Sbjct: 1 MLDLADFITDRGGDPNKIKESQRRRSAPEAAVDEVITLYEEARKARYEVSQINSKLNGLL 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
+ IG+K K KE D+++L GN++H SVP
Sbjct: 61 REIGKKKKNKE---DATSLLEEKAKLESQRKEAESVALQKEDLRDKKIRTIGNYVHDSVP 117
Query: 91 VSNNEDENGIVRTKGD----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
VSNNED+N ++RT E SH +++T +DG D E G V G RGY L G +
Sbjct: 118 VSNNEDDNSVIRTWFPEGFVAEKPNCLSHHEVLTRLDGYDPERGVKVVGHRGYCLTGYGL 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L + LV Y L ++GY P P FM +E+M + AQL QFDEELYKV
Sbjct: 178 FLNLALVNYGLEFLWKRGYKPNQPPHFMLREMMAKTAQLEQFDEELYKV----------T 227
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------ 254
+D+ DKYLIATSEQP+ A+H WL + LPIRY G STC+R+E
Sbjct: 228 ESEDKSTDKYLIATSEQPLSALHDSEWLQDKDLPIRYAGYSTCYRKEAGAHGKDAWGIFR 287
Query: 255 -----------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDL 281
LTK + Y+VV+IVSGALN+AAAKK DL
Sbjct: 288 VHQFEKIEQFVLTKPEDSWKAFDEMISTSEEFYKSLGLPYQVVSIVSGALNNAAAKKYDL 347
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP ++ELVSCSNC DYQ+R L +RYG K + K +VH LNAT CAT R +C
Sbjct: 348 EAWFPFQQEYKELVSCSNCTDYQARALGIRYGPKKTTDAKKSYVHALNATLCATERTLCC 407
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 391
+LE +QTE G +P+ LRK++P A E +P+ K P D TK + K
Sbjct: 408 VLENYQTEDGFIVPEPLRKYIPG-----APEFLPYTKELPKDSTSTKARSK 453
>gi|342351026|pdb|3QNE|A Chain A, Candida Albicans Seryl-Trna Synthetase
gi|342351028|pdb|3QO7|A Chain A, Crystal Structure Of The Seryl-Trna Synthetase From
Candida Albicans
gi|342351029|pdb|3QO8|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Candida
Albicans
Length = 485
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 186/476 (39%), Positives = 238/476 (50%), Gaps = 104/476 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGGDPE ++ +QK R +VELVD++I +W + R D NK N
Sbjct: 1 MLDINAFLVEKGGDPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG++ KAKE D GN +H SV S
Sbjct: 61 KEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESVVDSQ 120
Query: 94 NEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E+ N +VRT +K K SH +++ +DG D E G + G RGYFL
Sbjct: 121 DEENNELVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDGYDPERGVRIVGHRGYFL 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y LS KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 181 RNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVI----- 235
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED----- 254
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E
Sbjct: 236 --------DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGK 287
Query: 255 ------------------LTK----------------------SIAYRVVNIVSGALNHA 274
LT+ + YRVV IVSG LN+A
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ ++ ++VH LN+T A
Sbjct: 348 AAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
T R IC ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 408 TERTICCILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 459
>gi|241952971|ref|XP_002419207.1| class II aminoacyl-tRNA synthetase, putative; cytosolic seryl-tRNA
synthetase, putative [Candida dubliniensis CD36]
gi|223642547|emb|CAX42796.1| class II aminoacyl-tRNA synthetase, putative [Candida dubliniensis
CD36]
Length = 462
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 186/476 (39%), Positives = 239/476 (50%), Gaps = 104/476 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGGDPE ++ +QK R +VELVD++I +W + R D NK N
Sbjct: 1 MLDINAFLVEKGGDPEIIKASQKKRGDSVELVDEIINEYKEWVKLRFDLDEHNKKLNSVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG++ KAKE D GN +H SV S
Sbjct: 61 KEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRAKVNQVGNIVHESVVDSQ 120
Query: 94 NEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E+ N +VRT +K K SH +++ +DG D E G + G RGYFL
Sbjct: 121 DEENNELVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDGYDPERGVRIVGHRGYFL 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y LS +KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 181 RNYGVFLNQALINYGLSFLSKKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVI----- 235
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED----- 254
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E
Sbjct: 236 --------DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGK 287
Query: 255 ------------------LTK----------------------SIAYRVVNIVSGALNHA 274
LT+ + YRVV IVSG LN+A
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ ++ ++VH LN+T A
Sbjct: 348 AAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
T R IC ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 408 TERTICCILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 459
>gi|19115779|ref|NP_594867.1| cytoplasmic serine-tRNA ligase Srs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|3183173|sp|O14018.1|SYSC_SCHPO RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|2440188|emb|CAB10149.1| cytoplasmic serine-tRNA ligase Srs1 (predicted)
[Schizosaccharomyces pombe]
Length = 450
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/461 (40%), Positives = 243/461 (52%), Gaps = 103/461 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LF+ EKGG+PE +R++Q+ R +V +VDKVIE +W R + DN NK N
Sbjct: 1 MLDINLFQVEKGGNPEIIRESQRKRGADVGVVDKVIEMYKEWVSLRFELDNTNKSINRVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG KMKAKE D+S L GN +H SVP
Sbjct: 61 KEIGLKMKAKE---DASELLEEKNSLTERKKNLIEQETAKNKEMLNVVSSIGNIVHDSVP 117
Query: 91 VSNNEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
VS +ED N I+R +G T E + SH +++T +DG D E G V+G RGYFL+ V
Sbjct: 118 VSMDEDNNEIIRKWAPEGVTVEKKNCLSHHEVLTRLDGYDPERGVKVSGHRGYFLRQYGV 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
+ L+QY L ++GY L P + K+VM + AQL QFDEELYKVI GD
Sbjct: 178 FFNLALIQYGLDFLEKRGYIALQAPTMLNKDVMAKTAQLEQFDEELYKVID-----GD-- 230
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ------------ 252
+++YLIATSEQPI A H W P LP++Y G STC+R+
Sbjct: 231 ------EERYLIATSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGI 284
Query: 253 -------------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKL 279
ED KS + YR+V IVSGALN+AAAKK
Sbjct: 285 FRVHAFEKIEQFVLTDPEKSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKY 344
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLEAWFP G ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T CAT R +
Sbjct: 345 DLEAWFPFQGEYKELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERAL 404
Query: 340 CAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
C ILE +QT GV +P L+ Y+ +PF K P
Sbjct: 405 CCILENYQTPDGVNVPKVLQP-----YMGGKTFLPFTKELP 440
>gi|410079651|ref|XP_003957406.1| hypothetical protein KAFR_0E01170 [Kazachstania africana CBS 2517]
gi|372463992|emb|CCF58271.1| hypothetical protein KAFR_0E01170 [Kazachstania africana CBS 2517]
Length = 458
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/475 (39%), Positives = 245/475 (51%), Gaps = 104/475 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+PE +R++QK R +VE+VD++I W + R + D NK N
Sbjct: 1 MLDINQFIEEKGGNPELIRQSQKARGDSVEIVDEIIALYKDWVKTRFELDECNKKMNKLQ 60
Query: 62 KVIGEKMKAKEP-----------VGDSSTL-----------------PGNHLHPSVPVSN 93
K IG K K KE V + +L GN +HPSV +SN
Sbjct: 61 KEIGLKFKNKEDATELLAQKDKIVEEKKSLIEKEQVEDNDLKSKVNQVGNIVHPSVVISN 120
Query: 94 NEDENGIVRT------------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E+ N +VRT T SH +++ +DG D E G ++G RGYFL
Sbjct: 121 DEENNELVRTWKPEGLEDVGPIASATGKPAALSHHEILLRLDGYDPERGVKISGHRGYFL 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y L+ ++GY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 181 RNYGVFLNQALINYGLNFLAKEGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVI----- 235
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ------- 252
D D+KYLIATSEQPI A H W P+ LPIRY+G STCFR+
Sbjct: 236 --------DGEDEKYLIATSEQPISAYHSGEWFESPQEQLPIRYVGYSTCFRREAGSHGK 287
Query: 253 ------------------------------------EDLTKS--IAYRVVNIVSGALNHA 274
E+ KS + YRVV IVSG LN+A
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEPEKSWEEFDKMIDHSEEFYKSLKLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T A
Sbjct: 348 AAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLSA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T R +C ILE +QTE G+ +P+ LRK++P E +PFVK P + KK+
Sbjct: 408 TERALCCILENYQTEDGLIVPEVLRKYIPG----EPEFLPFVKELPKNSTSNKKK 458
>gi|68471585|ref|XP_720099.1| potential serine tRNA synthetase [Candida albicans SC5314]
gi|20140251|sp|Q9HGT6.1|SYSC_CANAL RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|9931532|gb|AAG02209.1|AF290915_1 seryl-tRNA synthetase [Candida albicans]
gi|46441951|gb|EAL01244.1| potential serine tRNA synthetase [Candida albicans SC5314]
gi|238880695|gb|EEQ44333.1| seryl-tRNA synthetase [Candida albicans WO-1]
Length = 462
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/476 (39%), Positives = 238/476 (50%), Gaps = 104/476 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGGDPE ++ +QK R +VELVD++I +W + R D NK N
Sbjct: 1 MLDINAFLVEKGGDPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG++ KAKE D GN +H SV S
Sbjct: 61 KEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESVVDSQ 120
Query: 94 NEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E+ N +VRT +K K SH +++ +DG D E G + G RGYFL
Sbjct: 121 DEENNELVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDGYDPERGVRIVGHRGYFL 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y LS KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 181 RNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVI----- 235
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED----- 254
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E
Sbjct: 236 --------DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGK 287
Query: 255 ------------------LTK----------------------SIAYRVVNIVSGALNHA 274
LT+ + YRVV IVSG LN+A
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ ++ ++VH LN+T A
Sbjct: 348 AAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
T R IC ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 408 TERTICCILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 459
>gi|255712569|ref|XP_002552567.1| KLTH0C07898p [Lachancea thermotolerans]
gi|238933946|emb|CAR22129.1| KLTH0C07898p [Lachancea thermotolerans CBS 6340]
Length = 461
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/475 (38%), Positives = 243/475 (51%), Gaps = 104/475 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F EKGG+PE +R++QK R +VE+VD++I + +W + R + D NK +N
Sbjct: 1 MLDITQFIEEKGGNPELIRQSQKARHASVEIVDEIIADYKEWVKTRFQLDELNKQQNKVQ 60
Query: 62 KVIGEKMKAKEP-----------VGDSSTLP-----------------GNHLHPSVPVSN 93
K IG K K KE + L GN +HPSV VSN
Sbjct: 61 KEIGLKFKNKEDPKELLAEKDRIAAEKKKLSELEQKQDNDLKQKVFQVGNIVHPSVVVSN 120
Query: 94 NEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E+ N +VR+ + + SH +++ +DG D E G ++G RGYF
Sbjct: 121 DEENNELVRSWKPENLSEVGTNASCSGKPASLSHHEVLLRLDGYDPERGVKISGHRGYFF 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L ++ Y LS KGY PL P M KE M + AQL++FDEELYKV+
Sbjct: 181 RNYGVFLNQAMINYGLSFLASKGYIPLQAPVMMDKEAMSKTAQLSEFDEELYKVMD---- 236
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ------- 252
GD D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+
Sbjct: 237 -GD--------DEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYAGYSSCFRREAGAHGK 287
Query: 253 --------------------------EDLTKSIA------------YRVVNIVSGALNHA 274
E+ + IA YRVV IVSG LN+A
Sbjct: 288 DAWGVFRVHAFEKIEQFVLTEPEKSWEEFDRMIATSEEFYQSLNLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T CA
Sbjct: 348 AAKKYDLEAWFPYQQEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T R +C +LE +QTE G+ +P+ LRK++P E IPF K P + KK+
Sbjct: 408 TQRALCCVLENYQTEEGLVVPEVLRKYIPG----EPEFIPFTKELPKNSTSNKKK 458
>gi|453083611|gb|EMF11656.1| serine-tRNA ligase [Mycosphaerella populorum SO2202]
Length = 491
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/482 (38%), Positives = 248/482 (51%), Gaps = 104/482 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFK-NLC 60
+LD++ F ++GG+P+K++++Q+ R E+VD+VI R+ ++ A K N
Sbjct: 1 MLDINDFIKDRGGNPDKIKESQRRRHAPEEVVDEVIALFEDHRKTQYAAGTTMGAKINAV 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP----------------------------------GNHLH 86
K +G KAK GD GN++H
Sbjct: 61 QKAMGANKKAK---GDPEEFKKLVQEKDQLSKEKAELEKQAAEKQKELLKKAKSIGNYVH 117
Query: 87 PSVPVSNNEDENGIVRTKG--DTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLK 142
+VPVS+NED N I+RT EV KK SH +++T IDG D E G + G RGY L
Sbjct: 118 DTVPVSDNEDNNSIIRTWAPEGVEVTKKDCMSHHEVLTRIDGYDPERGVKIVGHRGYCLT 177
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
G + L + LV Y L KGY P PFFM +E M + AQL QFDEELYKV K
Sbjct: 178 GYGLFLNLALVNYGLEFLFNKGYKPNQPPFFMLREAMAKTAQLEQFDEELYKVTEK---- 233
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---------- 252
E D DKYLIATSEQPI A+H WL LPI+Y G STCFR+
Sbjct: 234 -----ENDPATDKYLIATSEQPISALHEGEWLNPTDLPIKYAGYSTCFRKEAGSHGKDAW 288
Query: 253 ---------------------------------EDLTKS--IAYRVVNIVSGALNHAAAK 277
E+ KS + Y+VV IVSGALN+AAAK
Sbjct: 289 GIFRVHQFEKIEQFIFCNPEDSWKHFDDMINTSEEFYKSLNLPYQVVAIVSGALNNAAAK 348
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE--FVHMLNATACAT 335
K DLEAWFP G ++ELVSCSNC DYQ+R L VR+GQ K+ + + +VH LN+T CAT
Sbjct: 349 KYDLEAWFPFQGEYKELVSCSNCTDYQTRELEVRFGQKKQTDASFQKSYVHALNSTLCAT 408
Query: 336 TRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ--KKQK 393
R +C +LE +Q E G+ +P+ LRK++P + +P+VK P D K + +QK
Sbjct: 409 ERALCCVLENYQREDGIEVPEVLRKYIPG----QPEFLPYVKELPKDSTSLKAKGVAEQK 464
Query: 394 EG 395
+G
Sbjct: 465 KG 466
>gi|401839443|gb|EJT42670.1| SES1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 462
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/469 (39%), Positives = 237/469 (50%), Gaps = 110/469 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F +KGG+PE +R++QK R NVE+VD++I + W + R D NK N
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNANVEIVDEIISDYKDWVKTRFDLDELNKKFNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D+S L GN +HPSV
Sbjct: 61 KDIGLKFKTKE---DASELLAEKEKLTQLKKELTEKEQEEDKDLKRKVFQVGNIVHPSVV 117
Query: 91 VSNNEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSN+E+ N +VRT E+ SH +++ +DG D + G ++G RG
Sbjct: 118 VSNDEENNELVRTWKPEELEAVGSIASVTGKTASLSHHEILLRLDGYDPDRGVKISGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFL+ V L L+ Y L KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 178 YFLRNYGVFLNQALINYGLQFLAAKGYIPLQAPVMMNKEVMAKTAQLSQFDEELYKVI-- 235
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
D D+KYLIATSEQPI A H D W P+ LPI Y G S+CFR+
Sbjct: 236 -----------DGEDEKYLIATSEQPISAYHSDEWFEKPQEQLPIHYAGYSSCFRREAGS 284
Query: 253 ---------------------------------------EDLTKS--IAYRVVNIVSGAL 271
E+ KS + YR+V IVSG L
Sbjct: 285 HGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
AT R +C ILE +Q E G+ +P+ LRK++P E +PFV P
Sbjct: 405 LAATQRALCCILENYQNEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
>gi|365982297|ref|XP_003667982.1| hypothetical protein NDAI_0A05840 [Naumovozyma dairenensis CBS 421]
gi|343766748|emb|CCD22739.1| hypothetical protein NDAI_0A05840 [Naumovozyma dairenensis CBS 421]
Length = 458
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 186/475 (39%), Positives = 244/475 (51%), Gaps = 104/475 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+PE +R++QK R +VELVD +I + W + R + D NK N
Sbjct: 1 MLDINQFIEEKGGNPELIRQSQKARNASVELVDDIIADYKDWVKTRFELDELNKKLNKLQ 60
Query: 62 KVIGEKMKAKEP-----------VGDSSTLP-----------------GNHLHPSVPVSN 93
K IG K K KE + + L GN +HPSV +SN
Sbjct: 61 KDIGLKFKNKEDPKELLVEKDILTAEKAKLTEREQKDDKDLKEKVFQVGNIVHPSVVISN 120
Query: 94 NEDENGIVRT------------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E+ N +VRT T SH +++ +DG D E G ++G RG+FL
Sbjct: 121 DEENNELVRTWKPEGLENVGPVASVTGKPATLSHHEILLRLDGYDPERGVKISGHRGFFL 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y LS + GY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 181 RNYGVFLNQALINYGLSYMAKNGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVID---- 236
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED----- 254
GD D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+E
Sbjct: 237 -GD--------DEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGSHGK 287
Query: 255 ------------------LTK----------------------SIAYRVVNIVSGALNHA 274
LT+ + YRVV IVSG LN+A
Sbjct: 288 DAWGIFRVHAFEKIEQFCLTEPEKSWEEFDKMINHSEAFYQSLKLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T A
Sbjct: 348 AAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T R +C ILE +QTE G+ +P+ LRK++P E +P+VK P + KK+
Sbjct: 408 TERALCCILENYQTEDGLIVPEVLRKYIPG----EPEFLPYVKELPKNSTSNKKK 458
>gi|425766706|gb|EKV05307.1| Seryl-tRNA synthetase [Penicillium digitatum PHI26]
gi|425781844|gb|EKV19785.1| Seryl-tRNA synthetase [Penicillium digitatum Pd1]
Length = 470
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 183/475 (38%), Positives = 249/475 (52%), Gaps = 99/475 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL F TE+GGD +K++++Q+ RF E VD+V+ + R+ R++ N
Sbjct: 1 MLDLADFVTERGGDLKKIKESQQKRFAPEETVDEVVALYEEARRARYEVTQMGSQINGVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K IG K K KE D+S L GN++H SVP
Sbjct: 61 KAIGMKKKNKE---DASELLAQKADLETKKKELEETAVAKEVQRDRKIRTIGNYVHESVP 117
Query: 91 VSNNEDENGIVR--TKGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
VSN+E +N ++R T + E++K SH +++T +DG D E G + G RGY L G +
Sbjct: 118 VSNDEADNQLIRSWTPENAEMQKPGCLSHHEVLTRLDGYDPERGVKIVGHRGYCLTGYGL 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L + L+ Y L KGYTP P FM K++M + AQL QFDEELYKV
Sbjct: 178 FLNLALINYGLEFLFNKGYTPNQPPQFMLKDLMAKTAQLEQFDEELYKV----------T 227
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------ 254
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E
Sbjct: 228 ESEDKSTDKYLIATSEQPLSALHDSEWLQDKDLPIKYAGYSTCYRKEAGSHGKDAWGIFR 287
Query: 255 -----------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDL 281
LTK + Y +V IVSGALN+AA+KK DL
Sbjct: 288 VHQFEKIEQFVLTKPEDSWQAFEDMISTSEEFYQSLKLPYNIVAIVSGALNNAASKKYDL 347
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP ++ELVSCSNC DYQSR L +RYG K + K +VH LN+T CAT R +C
Sbjct: 348 EAWFPFQQEYKELVSCSNCTDYQSRALEIRYGVKKATDLKKTYVHALNSTLCATERTLCC 407
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQKEG 395
+LE +Q E G+ +P+ LRK++P A E +P+ K P D TK + K ++G
Sbjct: 408 VLENYQKEDGIEVPEVLRKYIPG-----APEFLPYTKELPKDSTSTKAKGKAQKG 457
>gi|237836223|ref|XP_002367409.1| seryl-tRNA synthetase, putative [Toxoplasma gondii ME49]
gi|211965073|gb|EEB00269.1| seryl-tRNA synthetase, putative [Toxoplasma gondii ME49]
gi|221505903|gb|EEE31538.1| seryl-tRNA synthetase, putative [Toxoplasma gondii VEG]
Length = 482
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 194/489 (39%), Positives = 249/489 (50%), Gaps = 109/489 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M +D++L R EKGGDP VR ++ R ++ E+VD+ + D KWR+ + + K N
Sbjct: 1 MTIDVNLLRAEKGGDPALVRDSEVRRGRSGEVVDQAVAVDKKWRENLFQLEQLKKELNAV 60
Query: 61 SKVIGEKMK--AKEPVGD--------SSTLP--------------------GNHLHPSVP 90
+K IG++ K AK+P D LP GN +H SVP
Sbjct: 61 NKEIGQRKKKDAKDPCQDLLAKSAELKQRLPTIEAAATEAEEKRESLLHKIGNIVHKSVP 120
Query: 91 VSNNEDENGIVRTKGDTEVRKK-------YSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
VSN+E N +VRT G + K H ++ + GVD + G AG RGYFLKG
Sbjct: 121 VSNDEVNNQVVRTWGTFDRNLKIDGTPGRMHHHQILARLGGVDFKKGVEAAGHRGYFLKG 180
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK----- 198
+ L + L QY L+ + KGYTP+ PFFMRKEVM A+L F+E LY++
Sbjct: 181 AGMLLNLALAQYGLAFLLRKGYTPVQPPFFMRKEVMARAAELKDFEETLYRIPHNQTGGS 240
Query: 199 ------GEKVGDSAPEKD-ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
EK G+ EKD + DD +LIATSEQP+C++H + L E LPIRY G S+CFR
Sbjct: 241 ADSKEGAEKNGEKKNEKDADRDDLFLIATSEQPLCSLHMNETLEEKELPIRYAGYSSCFR 300
Query: 252 Q------------------------------------EDL---------TKSIAYRVVNI 266
+ ED+ T + YRVV+I
Sbjct: 301 KEAGSHGKDCWGIFRIHQFEKVEQFCITTPEESWKMHEDMIGMAEEFYQTLELPYRVVSI 360
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK------MNE 320
VSGALN AAAKK DLEAWFPG G FRELVSCSNC DYQ+R L +R NE
Sbjct: 361 VSGALNDAAAKKYDLEAWFPGYGDFRELVSCSNCTDYQARALDIRLAHKSSSAKGADRNE 420
Query: 321 KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
K VHMLN T AT R +C ILE +QT GV++P R VP Y+ A +PFV
Sbjct: 421 KAH-VHMLNGTLVATQRCLCCILENYQTPLGVKVP---RVLVP--YMGGAEFLPFVDAG- 473
Query: 381 IDEEETKKQ 389
EE KK+
Sbjct: 474 --EESVKKE 480
>gi|212536014|ref|XP_002148163.1| seryl-tRNA synthetase [Talaromyces marneffei ATCC 18224]
gi|210070562|gb|EEA24652.1| seryl-tRNA synthetase [Talaromyces marneffei ATCC 18224]
Length = 466
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 244/475 (51%), Gaps = 92/475 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F ++GGD K+R++Q+ R+ +V++V+E R+ R++ N
Sbjct: 1 MLDINDFVADRGGDLNKIRESQRRRYAPESVVEEVLELFEAARRARYEVTQIGSKINAVQ 60
Query: 62 KVIGEKMKAKEPV----------------GDSSTLP------------GNHLHPSVPVSN 93
K IG+K K KE + S L GN++H SVP+S+
Sbjct: 61 KEIGQKKKNKEDATELLQQKIDLEKQKKEAEESALAKEKERDRKIKTIGNYVHDSVPISD 120
Query: 94 NEDENGIVRTKGDTEV----RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N + RT V R SH +++T +DG D E G + G RGY L G + L
Sbjct: 121 NEDNNVVERTWAPENVVVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV Y L KGY P P FM K+ M + AQL QFDEELYKV + +
Sbjct: 181 LALVNYGLEFLFNKGYKPNQPPHFMLKDAMAKTAQLEQFDEELYKV----------SESE 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
D+ DKYLIATSEQP+ A+H + W EA LP++Y G STC+R+
Sbjct: 231 DKDTDKYLIATSEQPLSALHSEEWFQEADLPLKYAGFSTCYRKEAGSHGKDAWGIFRVHQ 290
Query: 253 --------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAW 284
E+ KS+ Y+VV+IVSGALN+AAAKK DLEAW
Sbjct: 291 FEKIEQFVLTNPEKSWEAFDDMIATSEEFYKSLGLPYQVVSIVSGALNNAAAKKYDLEAW 350
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +RYG KK + K +VH LNAT CAT R +C ILE
Sbjct: 351 FPFQGEYKELVSCSNCTDYQTRELEIRYG-AKKADSKKAYVHALNATLCATERTLCCILE 409
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
+QTE G +P L+K++P +P+ + P D KK K G K+
Sbjct: 410 NYQTEDGFNVPAPLQKYIPGA----PTFLPYTRELPKDTTSAKKGKGGVAGAAKQ 460
>gi|342351027|pdb|3QO5|A Chain A, Crystal Structure Of The Seryl-Trna Synthetase From
Candida Albicans
Length = 485
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 185/476 (38%), Positives = 237/476 (49%), Gaps = 104/476 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGGDPE ++ +QK R +VELVD++I +W + R D NK N
Sbjct: 1 MLDINAFLVEKGGDPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG++ KAKE D GN +H SV S
Sbjct: 61 KEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESVVDSQ 120
Query: 94 NEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E+ N +VRT +K K SH +++ +DG D E G + G RGYFL
Sbjct: 121 DEENNELVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDGYDPERGVRIVGHRGYFL 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y L KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 181 RNYGVFLNQALINYGLLFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVI----- 235
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED----- 254
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E
Sbjct: 236 --------DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGK 287
Query: 255 ------------------LTK----------------------SIAYRVVNIVSGALNHA 274
LT+ + YRVV IVSG LN+A
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ ++ ++VH LN+T A
Sbjct: 348 AAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
T R IC ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 408 TERTICCILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 459
>gi|126136162|ref|XP_001384605.1| Seryl-tRNA synthetase, cytoplasmic (Serine--tRNA ligase) (SerRS)
[Scheffersomyces stipitis CBS 6054]
gi|126091803|gb|ABN66576.1| Seryl-tRNA synthetase, cytoplasmic (Serine--tRNA ligase) (SerRS)
[Scheffersomyces stipitis CBS 6054]
Length = 460
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 189/480 (39%), Positives = 241/480 (50%), Gaps = 109/480 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+PEK++ +QK R +VELVD++I + W R D NK N
Sbjct: 1 MLDINSFLVEKGGEPEKIKISQKKRGASVELVDEIIADYKNWTVIRFDLDAKNKQINAIQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+K KAKE D+S L GN +H SV
Sbjct: 61 KQIGQKYKAKE---DASELLAEKDKLTEEKKKLIEQEQKADTDLRFKVNQVGNLVHESVV 117
Query: 91 VSNNEDENGIVRT-----------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGY 139
S +ED N +VRT T SH +++ +DG D E G + G RGY
Sbjct: 118 DSMDEDNNELVRTWKPESYEVGQVAAATGAPAALSHHEVLLRLDGYDPERGVRIVGHRGY 177
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
FL+ V L L+ Y L+ + YTPL P M KEVM + AQL+QFDEELYKVI
Sbjct: 178 FLRNYGVFLNQALINYGLNFLAKNDYTPLQAPVMMNKEVMAKTAQLSQFDEELYKVI--- 234
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ----- 252
D D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+
Sbjct: 235 ----------DGEDEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGSH 284
Query: 253 --------------------------------------EDLTKSIA--YRVVNIVSGALN 272
E+ KS+ YRVV IVSG LN
Sbjct: 285 GKDAWGIFRVHAFEKIEQFVLTEPEKSWQEFDRMIGLSEEFYKSLGLPYRVVGIVSGELN 344
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ + ++VH LN+T
Sbjct: 345 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 404
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
AT R +C ILE +Q E G+ IP+ LRK++P E IPFVK P + TKK K+
Sbjct: 405 SATQRALCCILENYQKEDGLVIPEVLRKYIPG----EPEFIPFVKELPKNSTSTKKAAKK 460
>gi|398392814|ref|XP_003849866.1| serine--tRNA ligase [Zymoseptoria tritici IPO323]
gi|339469744|gb|EGP84842.1| hypothetical protein MYCGRDRAFT_61156 [Zymoseptoria tritici IPO323]
Length = 486
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 183/472 (38%), Positives = 244/472 (51%), Gaps = 96/472 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKA----------- 50
+LD++ F E+GGDP K++++Q+ R E+VD+VI R+ + A
Sbjct: 1 MLDINDFIKERGGDPAKIKESQRRRHAPEEVVDEVIALFEDHRKTHYAAATEMGAKLNKV 60
Query: 51 --------------DNFNKFKNLCSKVIGEK--------MKAKEPVGDSSTLPGNHLHPS 88
+ F + + + EK K KE + + ++ GN++H S
Sbjct: 61 QKDMGLNKKNKGDPEEFKELQKQKKDLEDEKKGLEELAAQKQKELLKKAKSI-GNYVHVS 119
Query: 89 VPVSNNEDENGIVR--TKGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
VPVS+NED+N +VR V KK SH +++T IDG D E G + G RGY L G
Sbjct: 120 VPVSDNEDQNALVRDWAPEGVAVEKKDCLSHHEVLTRIDGYDPERGVKIVGHRGYCLTGY 179
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
+ L + LV Y L KGY P PF M +E M + AQL QFDEELYKV K
Sbjct: 180 GLFLNLALVNYGLEFLFNKGYKPNQPPFMMLREAMAKTAQLEQFDEELYKVTEK------ 233
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------ 252
E D DKYLIATSEQPI A+H WL + LPI+Y G STCFR+
Sbjct: 234 ---ENDPASDKYLIATSEQPISALHEGEWLNKEDLPIKYAGYSTCFRKEAGSHGKDAWGI 290
Query: 253 -------------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKL 279
E+ KS I YRVV IVSGALN+AAAKK
Sbjct: 291 FRVHQFEKIEQFVFCKPEDSWEHFDGMINTSEEFYKSLKIPYRVVAIVSGALNNAAAKKY 350
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLEAWFP G ++ELVSCSNC DYQ+R L +R+GQ K + + +VH LN+T CAT R +
Sbjct: 351 DLEAWFPFQGEYKELVSCSNCTDYQTRELEIRFGQKKLTDTQKTYVHALNSTLCATERAL 410
Query: 340 CAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
C +LE +Q E G+ +P+ LRK++P + +P+VK P D K + K
Sbjct: 411 CCVLENYQREDGIEVPEVLRKYIPG----QPEFLPYVKELPKDSTSLKAKGK 458
>gi|407859775|gb|EKG07151.1| seryl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 477
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 187/497 (37%), Positives = 246/497 (49%), Gaps = 129/497 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKF---- 56
M LD+ LFR EKG D +R++Q+ RF + +VD V+E D WR+ + D +NK
Sbjct: 1 MGLDVQLFRDEKGADI--IRESQRRRFADSTIVDAVLEVDKSWRRTQFMTDAYNKLINTC 58
Query: 57 --------------------------------------KNLC-------SKVIGEKM--- 68
K LC SK + E++
Sbjct: 59 SKLVGAKKKEKEADGDTSDIPESIRAACKEGELAPDQLKGLCVLQLKQLSKDLSEQVSVL 118
Query: 69 --KAKEPVGDSSTLP---GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLITMI 122
+A E V L GN +H SVPV+ +ED N +VRT GD R K +HV ++ +
Sbjct: 119 AKEAAELVAKRDGLVLSVGNIIHESVPVAQDEDTGNVVVRTFGDVTKRAKLNHVTIMERL 178
Query: 123 DGVDSEAGAI-VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE 181
+D+ +AGGR Y LKG V LQ+ L+ Y ++ + +GYTPLY PFF+ K+ M E
Sbjct: 179 GMMDTTKTVTSMAGGRAYVLKGGLVQLQLALLSYGMNFLVSRGYTPLYPPFFLNKDAMSE 238
Query: 182 VAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 241
VAQL+QFDEELYKV G GE +KYLIATSE PI A HR W E P+
Sbjct: 239 VAQLSQFDEELYKVTGDGE-------------EKYLIATSEMPIAAYHRGKWFTELKEPL 285
Query: 242 RYLGVSTCFRQ---------------------------------------------EDLT 256
+Y G+S+CFR+ E+
Sbjct: 286 KYAGMSSCFRKEAGAHGRDTLGIFRVHQFDKLEQFLVCSPREEESWRHLEEMIRTSEEFC 345
Query: 257 KSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG- 313
+S+ YR +NI SGALN+AAAKK D+EAWFP SGAFRELVSCSNC DYQ+R + R+G
Sbjct: 346 ESLGLPYRTINICSGALNNAAAKKYDVEAWFPASGAFRELVSCSNCTDYQARGVNCRFGP 405
Query: 314 --QTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAG 371
+ N E+ HMLN T CA TR +C I E +QTE GV IPD LR ++ + +
Sbjct: 406 NLRNVSANNVKEYCHMLNGTLCAITRTMCCICENYQTEEGVVIPDVLRPYMMGLEM---- 461
Query: 372 EIPFVKTAPIDEEETKK 388
+ F P EE K
Sbjct: 462 -LKFADNVPSAEETEPK 477
>gi|219128753|ref|XP_002184570.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404020|gb|EEC43969.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 462
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 183/469 (39%), Positives = 242/469 (51%), Gaps = 95/469 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKN-L 59
M +D++ R KGGDP K R++ + RFK+ +VD+V+ D WR+ R D K N L
Sbjct: 1 MPIDINELRDYKGGDPAKWRRHMEQRFKDPSIVDQVLARDADWRELRSTIDQIRKDVNKL 60
Query: 60 CSKVIGEKMKAKEPVGDS---------------STLP-------------GNHLHPSVPV 91
+VI K KA+EP D + LP GN + P VP+
Sbjct: 61 QKEVIAPKKKAREPCDDEVAQMKAMQVDIKDKEAQLPIAAAERDALLYKIGNVVDPEVPI 120
Query: 92 SNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
S +ED + +V K +H +L+ I G + G VAG R YFL V L
Sbjct: 121 SKDEDADNLVLAY-TLPGSKPLTHDELLWRIGGYEPVRGQNVAGHRAYFLTNAGVMLNQA 179
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
++ Y+++ +GY L PFFM KEVM +AQL FDE+LYKV GK + + D
Sbjct: 180 IINYSIAFLSARGYNVLQPPFFMNKEVMAGIAQLEDFDEQLYKVSGKTD-------DPDG 232
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------ 253
+KYLIATSEQPICA H+ W+ +LP+RY G+STCFR+E
Sbjct: 233 ATEKYLIATSEQPICAYHKGDWIDPKTLPLRYAGISTCFRKEAGSSGKDIRGIFRVHQFE 292
Query: 254 ---------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAW 284
D +S + YRVV +VSG LN AA KK DLE W
Sbjct: 293 KVEQFCLTVDDFEISQAEQKRMLQAAKDFYESLGVGYRVVCLVSGELNDAAVKKYDLEGW 352
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYG-QTKKMN--EKIEFVHMLNATACATTRVICA 341
FPG +RELVSCSNC DYQ+R + VR G +TK M+ + +VHMLN+T CAT R IC
Sbjct: 353 FPGQNTYRELVSCSNCTDYQARGVGVRCGNKTKSMDLTARASYVHMLNSTLCATGRGICC 412
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
+LET+QTETGV +P+ LR F+ +PFV+ P E TK +K
Sbjct: 413 LLETYQTETGVVVPEVLRPFMGGTDF-----MPFVRGPP---EMTKGEK 453
>gi|401626353|gb|EJS44303.1| ses1p [Saccharomyces arboricola H-6]
Length = 462
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 184/481 (38%), Positives = 245/481 (50%), Gaps = 110/481 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F +KGG+PE +R++QK R +VE+VD++I + W + R + D NK N
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D+S L GN +HPSV
Sbjct: 61 KDIGLKFKNKE---DASELLAEKEKLTQHKKELTDREQEEDKGLKKKVFQVGNIVHPSVV 117
Query: 91 VSNNEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSN+E+ N +VRT E+ SH +++ +DG D + G ++G RG
Sbjct: 118 VSNDEENNELVRTWKPEELEAVGPIASVTGKPANLSHHEILLRLDGYDPDRGVKISGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFL+ V L L+ Y L KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 178 YFLRNYGVFLNQALINYGLQFLAAKGYIPLQAPVMMNKEVMAKTAQLSQFDEELYKVID- 236
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
GD D+KYLIATSEQPI A H W P+ LPI Y G S+CFR+
Sbjct: 237 ----GD--------DEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYAGYSSCFRREAGS 284
Query: 253 ---------------------------------------EDLTKS--IAYRVVNIVSGAL 271
E+ KS + YR+V IVSG L
Sbjct: 285 HGKDAWGVFRVHAFEKIEQFVLAEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
AT R +C +LE +QTE G+ +P+ LRK++P E +PFV P + +K + K
Sbjct: 405 LAATQRALCCVLENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELPKNSTSSKDKNK 460
Query: 392 Q 392
+
Sbjct: 461 K 461
>gi|358373335|dbj|GAA89934.1| seryl-tRNA synthetase [Aspergillus kawachii IFO 4308]
Length = 462
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 183/457 (40%), Positives = 244/457 (53%), Gaps = 81/457 (17%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL F +++GGDP K++++Q+ R+ +VD+V+ + R+ R++ N N
Sbjct: 1 MLDLADFISDRGGDPNKIKESQRKRYAPESVVDEVLSLYEEARRARYEVMQINSQLNALQ 60
Query: 62 KVIGEKMKAKEPVGD--------------SSTLP--------------GNHLHPSVPVSN 93
K IG++ K KE D + L GN +H SVPVSN
Sbjct: 61 KEIGKRKKNKEDANDLMEQKADLERRKKDAEELAIQKEKQRDGKIRTIGNLVHDSVPVSN 120
Query: 94 NEDENGIVRTKGDTEV----RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED+N ++RT V R SH +++T +DG DSE G V G RGY L G + L
Sbjct: 121 NEDDNAVIRTWAPDNVKVEKRNCLSHHEVLTRLDGFDSERGVKVVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L+ Y L KGY P P FM K++M + AQL QFDEELYKV +
Sbjct: 181 LALINYGLEFLWGKGYKPNQPPQFMLKDMMAKTAQLEQFDEELYKV----------TESE 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRY----------LGV-STCFRQEDLTK- 257
D+ DKYLIATSEQP+ A+H WL + LPI+ LG+ ST Q LTK
Sbjct: 231 DKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKLVVPACLVNFSLGLTSTQIEQFVLTKP 290
Query: 258 ---------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVS 296
+ Y+VV IVSGALN+AA+KK DLEAWFP G ++ELVS
Sbjct: 291 EDSWQAFDEMMATSEEFYRSLGLPYQVVAIVSGALNNAASKKYDLEAWFPFQGEYKELVS 350
Query: 297 CSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPD 356
CSNC DYQSR L +RYG K + K +VH LNAT CAT R +C +LE +QT+ G+ +P+
Sbjct: 351 CSNCTDYQSRALEIRYGTKKATDVKKSYVHALNATLCATERTLCCVLENYQTDDGIIVPE 410
Query: 357 CLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQ 392
LRK++P A E IP+ K P D K + KQ
Sbjct: 411 PLRKYIPG-----APEFIPYSKELPKDSTSQKNKAKQ 442
>gi|71421977|ref|XP_811974.1| seryl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
gi|70876700|gb|EAN90123.1| seryl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 477
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 186/497 (37%), Positives = 246/497 (49%), Gaps = 129/497 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKF---- 56
M LD+ LFR EKG D +R++Q+ RF + +VD V+E D WR+ + D +NK
Sbjct: 1 MGLDVQLFRDEKGADI--IRESQRRRFADPTIVDAVLEVDKSWRRTQFMTDAYNKLINTC 58
Query: 57 --------------------------------------KNLC-------SKVIGEKM--- 68
K LC SK + E++
Sbjct: 59 SKLVGAKKKEKEADGDTSDIPESIRAACKEGELAPDQLKGLCVLQLKQLSKDLSEQVSVL 118
Query: 69 --KAKEPVGDSSTLP---GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLITMI 122
+A E V L GN +H SVPV+ +ED N +VRT GD R K +HV ++ +
Sbjct: 119 AKEAAELVAKRDGLVLSVGNIIHESVPVAQDEDTGNVVVRTFGDVTKRAKLNHVTIMERL 178
Query: 123 DGVDSEAGAI-VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE 181
+D+ +AGGR Y LKG V LQ+ L+ Y ++ + +GYTPLY PFF+ K+ M E
Sbjct: 179 GMMDTTKTVTSMAGGRAYVLKGGLVQLQLALLSYGMNFLVSRGYTPLYPPFFLNKDAMSE 238
Query: 182 VAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 241
VAQL+QFDEELYKV G GE +KYLIATSE PI A HR W E P+
Sbjct: 239 VAQLSQFDEELYKVTGDGE-------------EKYLIATSEMPIAAYHRGKWFTELKEPL 285
Query: 242 RYLGVSTCFRQ---------------------------------------------EDLT 256
+Y G+S+CFR+ E+
Sbjct: 286 KYAGMSSCFRKEAGAHGRDTLGIFRVHQFDKLEQFLVCSPREEESWRHLEEMIRTSEEFC 345
Query: 257 KSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG- 313
+S+ YR +NI SGALN+AAAKK D+EAWFP SGAFRELVSCSNC DYQ+R + R+G
Sbjct: 346 ESLGLPYRTINICSGALNNAAAKKYDVEAWFPASGAFRELVSCSNCTDYQARGVNCRFGP 405
Query: 314 --QTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAG 371
+ N E+ HMLN T CA TR +C I E +QTE GV +PD LR ++ + +
Sbjct: 406 NLRNVSANNVKEYCHMLNGTLCAITRTMCCICENYQTEEGVVVPDVLRPYMMGLEM---- 461
Query: 372 EIPFVKTAPIDEEETKK 388
+ F P EE K
Sbjct: 462 -LKFADNVPSAEETESK 477
>gi|255726666|ref|XP_002548259.1| seryl-tRNA synthetase [Candida tropicalis MYA-3404]
gi|240134183|gb|EER33738.1| seryl-tRNA synthetase [Candida tropicalis MYA-3404]
Length = 462
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 185/479 (38%), Positives = 244/479 (50%), Gaps = 110/479 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+P+ ++ +QK R +VELVD++I + +W + R D NK N
Sbjct: 1 MLDINAFIVEKGGNPDLIKASQKKRGDSVELVDEIISDYKEWVKIRFDLDEHNKKLNTIQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K IG+K KAKE D+S L GN +H SV
Sbjct: 61 KEIGKKFKAKE---DASELVAEKEKIAAEKKELIEKEAEADKQVRFKVNQVGNIVHESVV 117
Query: 91 VSNNEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
S +E+ N +VRT + +K K SH +++ +DG D + G + G RG
Sbjct: 118 DSQDEENNELVRTWTPKDYKKIEQVAAGTNAPAKLSHHEVLLRLDGYDPDRGVRIVGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFL+ V L L+ Y LS +K Y PL P M K+VM + AQL+QFDEELYKVI
Sbjct: 178 YFLRNYGVFLNQALINYGLSFLAKKDYVPLQAPVMMNKDVMAKTAQLSQFDEELYKVI-- 235
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED-- 254
D D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E
Sbjct: 236 -----------DGEDEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGS 284
Query: 255 ---------------------LTK----------------------SIAYRVVNIVSGAL 271
LT+ + YRVV IVSG L
Sbjct: 285 HGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ ++ ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
AT R IC ILE +Q E G+ +P+ LRK++P E IPFVK P + KK K
Sbjct: 405 LSATERTICCILENYQKEDGLVVPEVLRKYIPG----EPEFIPFVKELPKNTTSAKKSK 459
>gi|310792722|gb|EFQ28183.1| seryl-tRNA synthetase [Glomerella graminicola M1.001]
Length = 456
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 184/475 (38%), Positives = 242/475 (50%), Gaps = 103/475 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL F E+GGDP+K+R++Q+ R VE+VD+VI R+ ++ A F N
Sbjct: 1 MLDLQDFIKERGGDPDKIRESQRRRHAPVEIVDEVIALWDDHRKTQYAATQFGSEINAVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG K K KE D + GN++H SVPVS+
Sbjct: 61 KEIGMKKKNKENADDLLKKKEDLQKQKKDKEDEAAAKLVALNAKAKSIGNYVHDSVPVSD 120
Query: 94 NEDENGIVRTKGDTE------VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
NED N + K + E + SH ++T + G DSE + G RGY L G +
Sbjct: 121 NED-NNVTERKWEPEAGLGAKTEQTLSHHQVVTRLAGYDSERAIKLVGHRGYCLTGYGLF 179
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L L+ Y L KGYTP PFFM + M + AQL QFDEELYKV G GE
Sbjct: 180 LNQALINYGLEFLFNKGYTPNQPPFFMNRNQMAKTAQLEQFDEELYKVTGDGE------- 232
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ--------------- 252
+KYLIATSEQP+ A+H + WL + LPI+Y G STCFR+
Sbjct: 233 ------EKYLIATSEQPLSALHSEEWLQASQLPIKYAGYSTCFRKEAGKHGKEAWGLFRV 286
Query: 253 ----------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLE 282
E+ KS+ YRVV+IVSGALN+AAAKK DLE
Sbjct: 287 HQFEKIEQFVFCKAEESWKHFDEMIAASEEFYKSLGLPYRVVSIVSGALNNAAAKKYDLE 346
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-----KIEFVHMLNATACATTR 337
AWFP ++ELVSCSNC DYQ+R L VRYG KK E + ++VH LNAT CAT R
Sbjct: 347 AWFPFQQEYKELVSCSNCTDYQTRELEVRYG-VKKAKEAPGAGRKDYVHALNATLCATER 405
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
+C I+E +QT G+++P+ LRK++P + +P+V P + QKK+
Sbjct: 406 TLCCIMENYQTPDGLKVPEVLRKYIPG----QPEFLPYVAELPKEITVVAGQKKK 456
>gi|46116720|ref|XP_384378.1| hypothetical protein FG04202.1 [Gibberella zeae PH-1]
Length = 471
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/479 (38%), Positives = 248/479 (51%), Gaps = 97/479 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F E+GG+PEK+R++Q+ R VELVD+VI R+ ++ N
Sbjct: 1 MLDIEDFIEERGGNPEKIRESQRRRHAPVELVDEVIALWQDARKTQYGVTQIGTQINGVQ 60
Query: 62 KVIGEKMKAKEPVGDS----------------------------STLPGNHLHPSVPVSN 93
K IG K +AKE D + L GN++H SV VS+
Sbjct: 61 KEIGLKKRAKEDATDLLKEKEELTEKKKKQEELAAAKNAELKVKAKLVGNYVHDSVHVSD 120
Query: 94 NEDENGIVRTKG----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N I RT D + SH D++ + G D G + G RGY L G + L
Sbjct: 121 NEDNNTIERTWAPETFDKTTQAALSHHDVLLRLGGYDPVRGVKLVGHRGYCLTGYGMFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV YA S KGYTP PF + ++ M + AQL+QFDEELY+V P
Sbjct: 181 LALVNYATSFLFHKGYTPNQPPFMLNRDQMAKTAQLSQFDEELYRV--------SEGPTP 232
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
E D+YLIATSEQP+ A+H + W+ A LPI+Y G STCFR+
Sbjct: 233 SE-SDRYLIATSEQPLSALHAEEWIQPAELPIKYCGYSTCFRKEAGSHGRDAWGVFRVHQ 291
Query: 253 --------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAW 284
E+ KS+ Y+VV IV+GALN+AAAKK DLEAW
Sbjct: 292 FEKVEQFVLCGPDDSWDQFDQMMANSEEFYKSLGLPYQVVGIVTGALNNAAAKKYDLEAW 351
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMN----EKIEFVHMLNATACATTRVIC 340
FP ++ELVSCSNC DYQ+R L +R+G K K E+VH LNAT CAT R +C
Sbjct: 352 FPFQKEYKELVSCSNCTDYQTRELEIRHGAKKGKQIVGGGKKEYVHALNATLCATERTLC 411
Query: 341 AILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
ILE +QTE G+ +P+ LRK++P E +PF+K AP +E +K +K+ G K+K
Sbjct: 412 CILENYQTEEGLVVPEVLRKYIPG----EPDFLPFIKEAP---KEAEKAEKKDAGKKEK 463
>gi|294885387|ref|XP_002771305.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
ATCC 50983]
gi|239874801|gb|EER03121.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
ATCC 50983]
Length = 463
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/475 (36%), Positives = 246/475 (51%), Gaps = 95/475 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF------- 53
M +D++ R EKGGDPE VR +++ R++N + V ++ D +WR+ D
Sbjct: 1 MPIDVNRLRAEKGGDPEAVRASEQKRYRNSDTVGTAVKLDQQWRKDMFALDKLREELGKI 60
Query: 54 ----------NKFKNLCSKVIGEKMKAKEPVGDSSTLP--------------GNHLHPSV 89
+K K+ C++ + K + ++ + + L GN + P V
Sbjct: 61 QKEITQKKKASKGKDPCTEELARKAEGEKKIQEQEKLVAEVAKSRDAAVHSIGNIILPDV 120
Query: 90 PVSNNEDENGIVRTKG-------DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLK 142
PVSN+ED N + + G D + H ++ M+ +D E G + G RGYFL+
Sbjct: 121 PVSNDEDNNEVYKKWGQPRQIFVDGKTPGHLYHHQIMYMLGAMDQERGINIVGHRGYFLR 180
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
G V L + L+ Y +S ++KGYT L PFFM+K++M E A+L FDE+LYK +
Sbjct: 181 GVGVLLNMALINYGMSLLVKKGYTALQPPFFMKKDIMAETAELGDFDEQLYKKKEEKGLK 240
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
+ + YLIATSEQPI A HR W+ E LP+RY G+STCFR+E
Sbjct: 241 ENDG-------EYYLIATSEQPISAYHRKEWIDEDQLPLRYAGISTCFRKEAGSHGKETW 293
Query: 254 ------------------------------DLTKS------IAYRVVNIVSGALNHAAAK 277
D+++ + YRVV IVSGALN AAAK
Sbjct: 294 GLYRIHQFEKLEQFCITTPEESVAMHEHMLDMSEEFYQSLDLPYRVVKIVSGALNDAAAK 353
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLEAWFPG ++ELVSCSNC DYQ+R + R G K+ + +VHMLN+T CAT R
Sbjct: 354 KYDLEAWFPGYNMYKELVSCSNCTDYQARAMETRCGHVKQGEREKRYVHMLNSTLCATER 413
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
+C I+E +Q E GVR+P R VP Y++ +P+VK P + +E KK +K+
Sbjct: 414 AMCCIVENYQEEEGVRVP---RVLVP--YMHGMEFLPYVKPIPKNPDEAKKAEKK 463
>gi|354543459|emb|CCE40178.1| hypothetical protein CPAR2_102160 [Candida parapsilosis]
Length = 458
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 183/475 (38%), Positives = 237/475 (49%), Gaps = 104/475 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGGDPEK++ +QK R VELVD++I + W + R D NK N
Sbjct: 1 MLDINAFIVEKGGDPEKIKISQKKRGAPVELVDEIISDYKDWVKIRFDLDEHNKKLNAIQ 60
Query: 62 KVIGEKMKAKE----------------------------PVGDSSTLPGNHLHPSVPVSN 93
K IG+K KAKE + + GN +H SV S
Sbjct: 61 KQIGQKFKAKEDPAELLKEKEQLTEEKKQLIEREANTDKELRNKVNQVGNLVHESVVDSM 120
Query: 94 NEDENGIVRT------------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E N +++T T SH +++ +DG D E G + G RGYFL
Sbjct: 121 DEANNELIKTWVPEGYKEPAQVAAGTNAPANLSHHEVLLRLDGYDPERGVRIVGHRGYFL 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y LS +KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 181 RNYGVFLNQALINYGLSFLAKKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVI----- 235
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED----- 254
D D+KYLIATSEQPI A H W P+ LPIRY G S+CFR+E
Sbjct: 236 --------DGEDEKYLIATSEQPISAYHAGEWFEKPQEQLPIRYAGYSSCFRREAGSHGK 287
Query: 255 ------------------LTK----------------------SIAYRVVNIVSGALNHA 274
LT+ + YRVV IVSG LN+A
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGASEEFYQSLGLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ + ++VH LN+T A
Sbjct: 348 AAKKFDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T R IC ILE +Q E G+ +P+ LRK++P E IP+VK P + K++
Sbjct: 408 TERTICCILENYQREDGLVVPEVLRKYIPG----EPEFIPYVKELPKNSTSQKRK 458
>gi|242794649|ref|XP_002482418.1| seryl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
gi|218719006|gb|EED18426.1| seryl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
Length = 467
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/469 (38%), Positives = 244/469 (52%), Gaps = 98/469 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F ++GGD K+R++Q+ R+ +VD+V+E R+ R++ + N
Sbjct: 1 MLDVNDFVADRGGDINKIRESQRRRYAPESVVDEVLELFEAARRARYETTQISSKINAVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+K K KE D+S L GN++H SVP
Sbjct: 61 KEIGQKKKNKE---DASELLKQKADLEKEKKESEENALAKEKERDRKIKTIGNYVHDSVP 117
Query: 91 VSNNEDENGIVRTKGDTEV----RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
+S+NED N + R V R SH +++T +DG D E G + G RGY L G +
Sbjct: 118 ISDNEDNNVVERVWAPENVVVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGYCLTGYGL 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L + LV Y L KGY P P FM K+ M + AQL QFDEELYKV +
Sbjct: 178 FLNLALVNYGLEFLFNKGYKPNQPPQFMLKDAMAKTAQLEQFDEELYKV----------S 227
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------ 254
+D+ DKYLIATSEQP+ A+H + WL ++ LP++Y G STC+R+E
Sbjct: 228 ESEDKETDKYLIATSEQPLSALHSEEWLIDSDLPVKYAGYSTCYRKEAGSHGKDAWGIFR 287
Query: 255 -----------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDL 281
LTK + Y+VV+IVSGALN+AAAKK DL
Sbjct: 288 VHQFEKIEQFVLTKPDKSWEAFDEMIATSEEFYKSLGLPYQVVSIVSGALNNAAAKKYDL 347
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP G ++ELVSCSNC DYQ+R L +RYG KK + K +VH LNAT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQTRELEIRYG-AKKADAKKSYVHALNATLCATERTLCC 406
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
ILE +QTE G+ +P L+K++P +P+ + P D KK K
Sbjct: 407 ILENYQTEDGINVPAPLQKYIPGA----PTFLPYTRELPKDTTSAKKGK 451
>gi|302892399|ref|XP_003045081.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726006|gb|EEU39368.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 471
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 184/474 (38%), Positives = 250/474 (52%), Gaps = 94/474 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F E+GG+PEK+R++Q+ R VELVD+VI R+ ++ N
Sbjct: 1 MLDIEDFIEERGGNPEKIRESQRRRHAPVELVDEVIALWQDARKTQYGVTQIGTQINGVQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG K +AKE + + + GN++H SV VS+
Sbjct: 61 KEIGLKKRAKEDATELLQQKEELTQKKKIQEELALAKNAELKVKAKMVGNYVHDSVHVSD 120
Query: 94 NEDENGIVRT---KGDTEVRKK-YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N I RT +G E +K SH +++ I G D G + G RGY L G + L
Sbjct: 121 NEDNNTIERTWKPEGFEESKKAALSHHEVLWRIGGYDPVRGVKLVGHRGYCLTGYGMFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L+ YA + KG+TP PF + + M + AQL+QFDEELY+V +G DS
Sbjct: 181 LALINYATTFLFNKGFTPNQPPFMLDRAQMAKTAQLSQFDEELYRV-SEGPTPSDS---- 235
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D+YLIATSEQP+ A+H D W+ LPI+Y G STCFR+E
Sbjct: 236 ----DRYLIATSEQPLSALHADEWIQPTELPIKYCGYSTCFRKEAGSHGRDAWGVFRVHQ 291
Query: 254 ---------------------------DLTKSIA--YRVVNIVSGALNHAAAKKLDLEAW 284
+ KS+ Y+VV IV+GALN+AAAKK DLEAW
Sbjct: 292 FEKVEQFVLCGPDDSWDHFDQMMANSEEFYKSLGLPYQVVGIVTGALNNAAAKKYDLEAW 351
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMN----EKIEFVHMLNATACATTRVIC 340
FP ++ELVSCSNC DYQ+R L +R+G K K E+VH LNAT CAT R +C
Sbjct: 352 FPFQSEYKELVSCSNCTDYQTRELEIRHGSKKGKQIVGGGKKEYVHALNATLCATERTMC 411
Query: 341 AILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKE 394
ILE +QTE G+ +P+ LRK++P E +PFVK AP D E+T+K+ +KE
Sbjct: 412 CILENYQTEEGLVVPEVLRKYIPG----EPEFLPFVKEAPKDSEKTEKKDGKKE 461
>gi|407424946|gb|EKF39213.1| seryl-tRNA synthetase, putative [Trypanosoma cruzi marinkellei]
Length = 477
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 186/497 (37%), Positives = 247/497 (49%), Gaps = 129/497 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK----- 55
M LD+ LFR EKG D +R++Q+ RF + +VD V+E D WR+ + D +NK
Sbjct: 1 MGLDVQLFRDEKGADI--IRESQRRRFADPTIVDAVLEVDKSWRRTQFMTDAYNKLINTC 58
Query: 56 -------------------------------------FKNLC-------SKVIGEKM--- 68
K+LC SK + +++
Sbjct: 59 SKLVGAKKKQKEADGDTSDIPESIRTACKEGELAPDQLKDLCVLQLKQLSKDLSDQVAVL 118
Query: 69 --KAKEPVGDSSTLP---GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLITMI 122
+A E V L GN +H SVPV+ +ED N +VRT GD R K +HV ++ +
Sbjct: 119 AKEAAELVTKRDGLVLSVGNIIHESVPVAQDEDTGNVVVRTFGDVTKRAKLNHVTIMERL 178
Query: 123 DGVDSEAGAI-VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE 181
+D+ +AGGR Y LKG V LQ+ L+ Y ++ + +GYTPLY PFF+ K+ M E
Sbjct: 179 GMMDTTKTVTSMAGGRAYVLKGGLVQLQLALLSYGMNFLVSRGYTPLYPPFFLNKDAMSE 238
Query: 182 VAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 241
VAQL+QFDEELYKV G GE +KYLIATSE PI A HR W E P+
Sbjct: 239 VAQLSQFDEELYKVTGDGE-------------EKYLIATSEMPIAAYHRGKWFTELKEPL 285
Query: 242 RYLGVSTCFRQ---------------------------------------------EDLT 256
+Y G+S+CFR+ E+
Sbjct: 286 KYAGMSSCFRKEAGAHGRDTLGIFRVHQFDKLEQFLVCSPREEESWRHLEEMIRTSEEFC 345
Query: 257 KSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG- 313
+S+ YR +NI SGALN+AAAKK D+EAWFP SGAFRELVSCSNC DYQ+R + R+G
Sbjct: 346 ESLGLPYRTINICSGALNNAAAKKYDVEAWFPASGAFRELVSCSNCTDYQARGVNCRFGP 405
Query: 314 --QTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAG 371
+ N E+ HMLN T CA TR +C I E +QTE GV IPD LR ++ + +
Sbjct: 406 NLRNVSANNVKEYCHMLNGTLCAITRTMCCICENYQTEEGVVIPDVLRPYMMGLEM---- 461
Query: 372 EIPFVKTAPIDEEETKK 388
+ F P EE K
Sbjct: 462 -LKFADNVPSTEETEPK 477
>gi|401413660|ref|XP_003886277.1| putative seryl-tRNA synthetase [Neospora caninum Liverpool]
gi|325120697|emb|CBZ56252.1| putative seryl-tRNA synthetase [Neospora caninum Liverpool]
Length = 480
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 194/485 (40%), Positives = 253/485 (52%), Gaps = 103/485 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M +D++L R EKGGDP VR ++ R ++ E+VD+ +E D KWR+ + + K N
Sbjct: 1 MTIDVNLLRAEKGGDPGLVRDSEVRRGRSGEVVDQAVEVDRKWRENLFQLEQLKKELNAV 60
Query: 61 SKVIGEKMK--AKEPVGDSST--------LP--------------------GNHLHPSVP 90
+K IG++ K AK+P D T LP GN +H SVP
Sbjct: 61 NKEIGQRKKKDAKDPCQDLLTQAAELKQRLPTIEAAATQAEEKRESLLHKIGNIVHKSVP 120
Query: 91 VSNNEDENGIVRTKG--DTEVR-----KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
VSN+E N +VRT G D ++ + H ++ + GVD + G AG RGYFLKG
Sbjct: 121 VSNDEANNQVVRTWGTFDRSIKIDGTPGRMHHHQILARLGGVDFKKGVEAAGHRGYFLKG 180
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV-------- 195
+ L V L QY L+ + KGYTP+ PFFMRKEVM A+L F+E LY++
Sbjct: 181 AGMLLNVALAQYGLAFLLRKGYTPVQPPFFMRKEVMARAAELKDFEETLYRIPHAQAAAG 240
Query: 196 IGKGEKVGDSAPEKD-ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-- 252
+ + EKD + DD +LIATSEQP+C++H L E LPIRY G S+CFR+
Sbjct: 241 APADKAGAEKKNEKDADRDDLFLIATSEQPLCSLHMGETLEEKELPIRYAGYSSCFRKEA 300
Query: 253 ----------------------------------EDLTKS---------IAYRVVNIVSG 269
ED+ + + YRVV+IVSG
Sbjct: 301 GSHGKDCWGIFRIHQFEKVEQFCITTPEESWKMHEDMIGAAEEFYQSLELPYRVVSIVSG 360
Query: 270 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ---TKKMNEKIE--F 324
ALN AAAKK DLEAWFPG +RELVSCSNC DYQSR L +R T K +K E
Sbjct: 361 ALNDAAAKKYDLEAWFPGYEDYRELVSCSNCTDYQSRALDIRLAHKASTAKGADKNEKGH 420
Query: 325 VHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 384
VHMLN T AT R +C ILE +QT GV++P R VP Y+ A +PFV+ A EE
Sbjct: 421 VHMLNGTLVATQRCLCCILENYQTPLGVKVP---RVLVP--YMGGAEFLPFVEGA--GEE 473
Query: 385 ETKKQ 389
KK+
Sbjct: 474 SVKKE 478
>gi|154312140|ref|XP_001555398.1| hypothetical protein BC1G_06103 [Botryotinia fuckeliana B05.10]
Length = 471
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 190/470 (40%), Positives = 241/470 (51%), Gaps = 91/470 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F TE+GG+P+ ++ +Q+ R+ E+VD+VI R+ ++ A N N
Sbjct: 1 MLDVNDFITERGGNPQTIKDSQRRRYAPEEVVDEVIAMYEDHRKTQYAATQVNSKINETQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K KAKE D++ L GN +H SVP
Sbjct: 61 KEIGAKKKAKE---DATELLQKKADLTKEKKTWDDAAAEKEVLLNKKIGTIGNLVHESVP 117
Query: 91 VSNNEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
V+N+ED N +RT +G T E + SH +++T +DG D E G V G RGYFLK V
Sbjct: 118 VNNDEDHNEELRTWAPQGVTVEKKDVLSHHEVLTRLDGYDPERGVKVVGHRGYFLKKWGV 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ Y L KGYTPL TP FM KE M + AQL QFDEELYKV+
Sbjct: 178 FLNQALINYGLEFLDSKGYTPLQTPQFMLKEYMAKTAQLEQFDEELYKVV---------- 227
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST------CFRQEDLTK--- 257
+ D +DKYLIATSEQPI A H D WL +PIR S FR K
Sbjct: 228 -DGDAQNDKYLIATSEQPISAFHADEWLTAKDMPIRREAGSHGRDAWGIFRVHQFEKIEQ 286
Query: 258 ---------------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
+ YRVV IVSGALN+AAAKK DLEAWFP G
Sbjct: 287 FVLTDPEKSWEEFDRMISFSEEFYQSLGVPYRVVAIVSGALNNAAAKKYDLEAWFPFQGE 346
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
++ELVSCSNC DYQSR L +RYG + + +VH LN+T CAT R +C +LE QTE
Sbjct: 347 YKELVSCSNCTDYQSRALEIRYGPKTQTGIRKNYVHALNSTLCATERALCCLLENFQTEE 406
Query: 351 GVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQKEGMKKK 399
G +P LRK++P A E IPF K P D K + K ++ K K
Sbjct: 407 GFNVPAPLRKYLPG-----APEFIPFSKELPKDTTSQKAKGKAEKAPKPK 451
>gi|429851452|gb|ELA26640.1| seryl-trna synthetase [Colletotrichum gloeosporioides Nara gc5]
Length = 456
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 179/462 (38%), Positives = 234/462 (50%), Gaps = 101/462 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL F E+GGDPEK+R++Q+ R +E VD+VI R+ ++ A N
Sbjct: 1 MLDLQDFIKERGGDPEKIRESQRRRHAPIEAVDEVIALWEDHRKTQYAATQIGSDINATQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG K K KE D + GN++H SVPVS+
Sbjct: 61 KEIGMKKKNKENADDLLKKKEDLQKQKKEKEDEAVAKLKVLNAKAKSIGNYVHESVPVSD 120
Query: 94 NEDENGIVR-----TKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
NED N R + + SH ++T + G DSE + G RGY L G + L
Sbjct: 121 NEDNNVTEREWKPEAGLGAKTEETLSHHQVVTRLAGYDSERAVKLVGHRGYCLTGYGLLL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
L+QY ++ +GYTP PF M++E M + AQL QFDEELYKV G GE
Sbjct: 181 NQALIQYGIAFLFNRGYTPNQPPFMMKREEMAKTAQLEQFDEELYKVTGDGE-------- 232
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---------------- 252
+KYLIATSEQP+ A+H + W+ + LPI+Y G STCFR+
Sbjct: 233 -----EKYLIATSEQPLSALHSEEWIQASQLPIKYAGYSTCFRKEAGKHGKEAWGLFRIH 287
Query: 253 ---------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEA 283
E+ KS+ YRVV+IVSGALN+AAAKK DLEA
Sbjct: 288 QFEKIEQFVFCKPEDSWKHFDEMIANSEEFYKSLGLPYRVVSIVSGALNNAAAKKYDLEA 347
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-----KIEFVHMLNATACATTRV 338
WFP ++ELVSCSNC DYQ+R L VRYG KK E + E+VH LNAT CAT R
Sbjct: 348 WFPFQQEYKELVSCSNCTDYQTRELEVRYG-VKKAKEAPGGGRKEYVHALNATLCATERT 406
Query: 339 ICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+C I+E +QT G +P+ LRK++P E +P+V P
Sbjct: 407 LCCIMENYQTPDGFEVPEVLRKYIPG----EPEFLPYVAELP 444
>gi|448516106|ref|XP_003867492.1| Ses1 seryl-tRNA synthetase [Candida orthopsilosis Co 90-125]
gi|380351831|emb|CCG22055.1| Ses1 seryl-tRNA synthetase [Candida orthopsilosis]
Length = 458
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 238/475 (50%), Gaps = 104/475 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGGDPEK++ +QK R +VELVD++I + W + R D NK N
Sbjct: 1 MLDINAFIVEKGGDPEKIKTSQKKRGASVELVDEIISDYKDWVKIRFDLDEQNKKLNAVQ 60
Query: 62 KVIGEKMKAKE----------------------------PVGDSSTLPGNHLHPSVPVSN 93
K IG+K KAKE + + GN +H SV S
Sbjct: 61 KQIGQKFKAKEDPAELLKEKDQLTEEKKQLIEREANTDKELRNKVNQVGNLVHESVVDSM 120
Query: 94 NEDENGIVRT------------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
+E N +++T + SH +++ +DG D E G + G RGYFL
Sbjct: 121 DEANNELIKTWVPEGYKEPAQVAAGSNAPANLSHHEVLLRLDGYDPERGVRIVGHRGYFL 180
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
+ V L L+ Y LS +KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 181 RNYGVFLNQALINYGLSFLSKKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVI----- 235
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED----- 254
D D+KYLIATSEQPI A H W P+ LPIRY G S+CFR+E
Sbjct: 236 --------DGEDEKYLIATSEQPISAYHAGEWFEKPQEQLPIRYAGYSSCFRREAGSHGK 287
Query: 255 ------------------LTK----------------------SIAYRVVNIVSGALNHA 274
LT+ + YRVV IVSG LN+A
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGASEEFYQSLGLPYRVVGIVSGELNNA 347
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ + ++VH LN+T A
Sbjct: 348 AAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSA 407
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T R +C ILE +Q E G+ +P+ LR+++P E IP+VK P + K++
Sbjct: 408 TERTVCCILENYQREDGLVVPEVLRRYIPG----EPEFIPYVKELPKNSTSQKRK 458
>gi|224006852|ref|XP_002292386.1| seryl-trna synthetase [Thalassiosira pseudonana CCMP1335]
gi|220972028|gb|EED90361.1| seryl-trna synthetase [Thalassiosira pseudonana CCMP1335]
Length = 499
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/512 (37%), Positives = 253/512 (49%), Gaps = 128/512 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKN-L 59
M +D++ RT KGG PE R+ + RFK+ LVD V+ D WR+ R D+ + N L
Sbjct: 1 MPIDINSLRTYKGGAPELYRQYMQQRFKDPTLVDAVLAKDEAWREIRASIDSLRQQVNKL 60
Query: 60 CSKVIGEKMKAKEPVGDS---------------STLP-------------GNHLHPSVPV 91
+VI K KAKEP + + LP GN + P VP+
Sbjct: 61 QKEVIAPKKKAKEPCEEEVKEMKSIQAEIKRLEAELPVVADERDALLNRIGNIVDPEVPI 120
Query: 92 SNNEDENGIV-----------RTKGD---------------TEVRKKYSHVDLITMIDGV 125
S++ED + +V + GD K +H DL+ IDG
Sbjct: 121 SDDEDADNLVVSLYPEPLEAEQANGDKPPLLPASLSNLSYTLPPTKPLTHDDLLWRIDGY 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ G VAG RGYFLK V L L+ Y ++ ++GY L P+FM K+VM +AQL
Sbjct: 181 EPIRGQNVAGHRGYFLKNAGVLLNQALINYGIAFLRKRGYQVLQPPYFMNKDVMSGIAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
FDE+LYKV GK + + + +KYLIATSEQPICA H++ W+ + +LP RY G
Sbjct: 241 EDFDEQLYKVSGKTD-------DPENTSEKYLIATSEQPICAYHKNEWIDDKALPFRYAG 293
Query: 246 VSTCFRQE----------------------------DLTKS------------------- 258
+STCFR+E D +S
Sbjct: 294 ISTCFRKEAGSSGRDIRGIFRVHQFEKIEQFCVVVDDFEESSKEQTRMIDAAKEFYESLG 353
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK- 317
YRVV IVSGALN AA KK DLEAWFPG A+RELVSCSNC DYQ+R + R GQ K
Sbjct: 354 FPYRVVCIVSGALNDAAVKKYDLEAWFPGQQAYRELVSCSNCTDYQARGVGARCGQKKTD 413
Query: 318 ----------MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 367
+ E+ +VH LNAT CAT R IC +LE +Q E GVR+P+ L F+ +
Sbjct: 414 TNKSKTKEEILAERASYVHFLNATLCATGRGICCLLENYQEENGVRVPEVLVPFMGGIDF 473
Query: 368 NEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
+PF + P+ E +K +KKQKE +K+
Sbjct: 474 -----LPFER-GPM--EMSKSEKKQKEHEQKQ 497
>gi|169612613|ref|XP_001799724.1| hypothetical protein SNOG_09430 [Phaeosphaeria nodorum SN15]
gi|111062502|gb|EAT83622.1| hypothetical protein SNOG_09430 [Phaeosphaeria nodorum SN15]
Length = 461
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 247/473 (52%), Gaps = 95/473 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F TE+GGDPEK+R +Q+ R VE+VD+VI + + R+ ++ A N
Sbjct: 1 MLDINDFITERGGDPEKIRDSQRKRNAPVEIVDEVIADFEEHRKTQYAATQIGSSINALQ 60
Query: 62 KVIGEKMKAKE----------------------------PVGDSSTLPGNHLHPSVPVSN 93
K +G K KAKE + + + GN+++ VPVSN
Sbjct: 61 KQVGAKKKAKEDATELLEEMKKLKEDKAKKEAEAAEKLVKLNNKAKTIGNYVYKDVPVSN 120
Query: 94 NEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
ED+N +++T + ++ H ++T + G D E G + G RGY L G + L
Sbjct: 121 TEDDNAVIKTWAPENRKAEFKSDGIPHHGVLTRLAGYDPERGVKIVGHRGYCLTGYGLFL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
+ L+ Y L KGYTP PFFM ++ M + AQL+ FDEELYKV +K PE
Sbjct: 181 NLALINYGLEFLFNKGYTPNQPPFFMLRDQMAKTAQLSDFDEELYKVTESKDK-----PE 235
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
DKYLIATSEQPI A+H + WL A LPI+Y G ST FR+E
Sbjct: 236 T----DKYLIATSEQPISALHSEEWLGTADLPIKYAGYSTNFRKEAGSHGKDAWGIFRIH 291
Query: 254 ---------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEA 283
D+ + + Y+VV IVSGALN+AAA K DLEA
Sbjct: 292 QFEKVEQFLLTTPEKSWEAFDDMLATSEEFYQSLGLPYQVVAIVSGALNNAAAMKRDLEA 351
Query: 284 WFP--GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
WFP G G ++ELVS SNC DYQ+R L +R+G K+ + ++VH LN T CAT R +C
Sbjct: 352 WFPVTGGGEYKELVSISNCTDYQTRELEIRFGVKKQTATRKDYVHALNGTLCATERTLCC 411
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK--TAPIDEEETKKQKKQ 392
+LE +QT G +P+ LRK++P + +PFVK P DE++ ++ KQ
Sbjct: 412 VLENYQTPEGFNVPEVLRKYIPG----QPAFLPFVKEWKQPTDEKKIPERPKQ 460
>gi|146422756|ref|XP_001487313.1| seryl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260]
Length = 497
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 184/469 (39%), Positives = 237/469 (50%), Gaps = 110/469 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+PE +R +QK R VELVD++I++ W + R + D NK N
Sbjct: 39 MLDINAFLVEKGGNPETIRISQKKRGAPVELVDEIIKDYKDWTKIRFELDEMNKKMNALQ 98
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+K KAKE D+S L GN +H SV
Sbjct: 99 KQIGQKYKAKE---DASELLKQKDTYTEEKKQLIEKEQKADTDLRFKVNQIGNIVHESVV 155
Query: 91 VSNNEDENGIVRTKGDTEVRKK------------YSHVDLITMIDGVDSEAGAIVAGGRG 138
S +E+ N +VRT V++ SH +++ +DG D E G + G RG
Sbjct: 156 DSQDEENNELVRTWLPEGVKEAGAIATATGAPAALSHHEVLLRLDGYDPERGVRIVGHRG 215
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFL+ V L L+ Y L GYTPL P M KEVM + AQL+QFDEELYKVI
Sbjct: 216 YFLRNYGVFLNQALINYGLHFLASNGYTPLQAPVMMNKEVMAKTAQLSQFDEELYKVID- 274
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED-- 254
GD D+KYLIATSEQPI A H W PE LP+RY G S+CFR+E
Sbjct: 275 ----GD--------DEKYLIATSEQPISAYHAGEWFESPEEQLPVRYAGYSSCFRREAGS 322
Query: 255 ---------------------LTK----------------------SIAYRVVNIVSGAL 271
LT+ + YRVV IVSG L
Sbjct: 323 HGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGLSEKFYQSLGLPYRVVGIVSGEL 382
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ + ++VH LN+T
Sbjct: 383 NNAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNST 442
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
AT R +C ILE +Q E G+ +P+ LRK++P E IP+ K P
Sbjct: 443 LSATQRALCCILENYQKEDGLVVPEVLRKYIPG----EPEFIPYAKELP 487
>gi|190344834|gb|EDK36592.2| seryl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260]
Length = 497
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 184/469 (39%), Positives = 237/469 (50%), Gaps = 110/469 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+PE +R +QK R VELVD++I++ W + R + D NK N
Sbjct: 39 MLDINAFLVEKGGNPETIRISQKKRGAPVELVDEIIKDYKDWTKIRFELDEMNKKMNALQ 98
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+K KAKE D+S L GN +H SV
Sbjct: 99 KQIGQKYKAKE---DASELLKQKDTYTEEKKQLIEKEQKADTDLRFKVNQIGNIVHESVV 155
Query: 91 VSNNEDENGIVRTKGDTEVRKK------------YSHVDLITMIDGVDSEAGAIVAGGRG 138
S +E+ N +VRT V++ SH +++ +DG D E G + G RG
Sbjct: 156 DSQDEENNELVRTWLPEGVKEAGAIATATGAPAALSHHEVLLRLDGYDPERGVRIVGHRG 215
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFL+ V L L+ Y L GYTPL P M KEVM + AQL+QFDEELYKVI
Sbjct: 216 YFLRNYGVFLNQALINYGLHFLASNGYTPLQAPVMMNKEVMAKTAQLSQFDEELYKVID- 274
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED-- 254
GD D+KYLIATSEQPI A H W PE LP+RY G S+CFR+E
Sbjct: 275 ----GD--------DEKYLIATSEQPISAYHAGEWFESPEEQLPVRYAGYSSCFRREAGS 322
Query: 255 ---------------------LTK----------------------SIAYRVVNIVSGAL 271
LT+ + YRVV IVSG L
Sbjct: 323 HGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGLSEKFYQSLGLPYRVVGIVSGEL 382
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ + ++VH LN+T
Sbjct: 383 NNAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNST 442
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
AT R +C ILE +Q E G+ +P+ LRK++P E IP+ K P
Sbjct: 443 LSATQRALCCILENYQKEDGLVVPEVLRKYIPG----EPEFIPYAKELP 487
>gi|402081117|gb|EJT76262.1| seryl-tRNA synthetase [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 489
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/459 (39%), Positives = 236/459 (51%), Gaps = 94/459 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKN-- 58
MVLD F E+GG+P+K+R++Q+ R +VE+VD++I RQ + A N
Sbjct: 1 MVLDATDFILERGGNPDKIRESQRRRHASVEVVDEIIAMWEDHRQTNYAAMQMGTQINEV 60
Query: 59 -----------------LCSKVIGEKMKAK---------EPVGDSSTLPGNHLHPSVPVS 92
L KV EK K + + + T GN +H SVPVS
Sbjct: 61 QKKIGAKKKAKENADELLAEKVALEKEKKRLQDLAADKEQLLNKKLTTIGNIVHDSVPVS 120
Query: 93 NNEDENGIVRTKGD----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
+NED N + RT E R+ SH +++T +DG D E G G RGYFL+ V L
Sbjct: 121 DNEDNNEVQRTWAPEGMAAEKRECLSHHEVLTRLDGYDPERGTKAVGHRGYFLRQWGVFL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
++ Y + KGYT L PFF+ K+ M + AQL QFDEELYKV+ GE
Sbjct: 181 NQAIINYGIEFLTNKGYTALQPPFFLLKDQMSKTAQLEQFDEELYKVV-DGEA------- 232
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
DKYLIATSEQPI H + WL LP++Y G STCFR+E
Sbjct: 233 -----DKYLIATSEQPISVYHANEWLLPQDLPLKYAGYSTCFRKEAGGHGRDVWGTFRVH 287
Query: 254 -----------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDLEA 283
D KS + YRVV+IVSGALN+AAAKK DLEA
Sbjct: 288 QFEKVEQFCITDPEKSWEMFDEMIANSEEFYKGLGLPYRVVSIVSGALNNAAAKKFDLEA 347
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFP G ++ELVSCSNC DYQSR L +R+G + K +VH LN+T AT+R +C +L
Sbjct: 348 WFPFQGEYKELVSCSNCTDYQSRSLDIRFGTKTQTTTKKSYVHCLNSTLTATSRTMCCLL 407
Query: 344 ETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
E +QTETG ++P+ LRK++P IPF + P D
Sbjct: 408 ENYQTETGFKVPEPLRKYLPGA----PDFIPFTRELPKD 442
>gi|260945325|ref|XP_002616960.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238848814|gb|EEQ38278.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 457
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/477 (38%), Positives = 238/477 (49%), Gaps = 110/477 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F +KGG P+K++++Q+ R VE+VD++I W R D NK N
Sbjct: 1 MLDINAFLADKGGFPDKIKESQRKRGAPVEIVDEIISGYKNWTTIRFDLDAANKKLNALQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+K KAKE D+S L GN +H SV
Sbjct: 61 KQIGQKFKAKE---DASELLAEKEKLTAEKKELTEAEQKADAELRFKVNQVGNIVHESVV 117
Query: 91 VSNNEDENGIVRT------------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRG 138
S +E+ N +VRT T K+SH +++ +DG D E G + G RG
Sbjct: 118 DSMDEENNELVRTWKPEGLKEIGEIAAATNAPAKFSHHEVLLKLDGYDPERGVKIVGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFL+ V L L+ Y LS EKGY PL P M K+VM + AQL+QFDEELYKV+
Sbjct: 178 YFLRKWGVFLNQALINYGLSFLYEKGYLPLQAPVMMNKDVMAKTAQLSQFDEELYKVMD- 236
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
GD D+KYLIATSEQPI A H W P LPIRY G S+CFR+
Sbjct: 237 ----GD--------DEKYLIATSEQPISAYHSGEWFESPAEQLPIRYAGYSSCFRREAGS 284
Query: 253 -----------------------------EDLTKSIA------------YRVVNIVSGAL 271
E+ + IA YRVV IVSG L
Sbjct: 285 HGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIANSEEFYQSLGLPYRVVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ + ++VH LN+T
Sbjct: 345 NNAAAKKFDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQSEKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 388
AT R +C ILE +Q E G+ +P+ LRK++P +PFVK P + KK
Sbjct: 405 LSATERALCCILENYQKEDGIVVPEVLRKYIPG----SPEFLPFVKELPKNSTSKKK 457
>gi|393231791|gb|EJD39380.1| serine-tRNA ligase [Auricularia delicata TFB-10046 SS5]
Length = 453
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/461 (40%), Positives = 241/461 (52%), Gaps = 100/461 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD--NFNKFKNL 59
+LD+ F T+KGG+PE +R++Q+ R VE+VD+VI DL ++ + + D K N
Sbjct: 1 MLDVLNFLTDKGGNPEAIRESQRRRGHRVEVVDEVI--DLYNQKIKQEFDLQALLKSINT 58
Query: 60 CSKVIGEKMKAKEP----VGDSSTLP------------------------GNHLHPSVPV 91
K IG K KAKE V TL GN + P+ PV
Sbjct: 59 IQKDIGAKKKAKENADELVAQKKTLDDKVPELRKAAVELDASLTKLLISIGNIVGPNTPV 118
Query: 92 SNNEDENGIVRT------KGDTEVRKK-YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
S ED+N +RT G + R H +++ +D VD E G VAG RGY+L
Sbjct: 119 SQTEDDNATLRTWHPDGPNGQVQQRTDILPHHEVLLRLDAVDLERGQKVAGHRGYYLTND 178
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
+ L L+ Y L ++GY + PFFMRK+ M + AQL QFDEELYKV G
Sbjct: 179 GLDLNQALISYGLDFLRKRGYKKIMPPFFMRKDAMAKTAQLEQFDEELYKVTG------- 231
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE--------- 253
DE DDKYLIATSEQPI A+H D W PE LPI+Y G STCFR+E
Sbjct: 232 -----DE-DDKYLIATSEQPISALHSDEWFESPEKQLPIKYAGYSTCFRKEAGAHGRDTW 285
Query: 254 ---------------------------DLTKS---------IAYRVVNIVSGALNHAAAK 277
D+ + I YRVV IVSGALN AAA
Sbjct: 286 GIFRVHQFEKVEQFIITEPEKSWATLDDMIANSEAFYQSLGIPYRVVAIVSGALNLAAAT 345
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLEAWFP GA++ELVSCSNC DYQSRRL VR G K+ + + +VHMLN T CAT R
Sbjct: 346 KYDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLRKQGDTRKNYVHMLNGTLCATER 405
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAV-YVNEAGEIPFVK 377
+C ++E +QTETG+ IP+ LR ++ ++ A E+P K
Sbjct: 406 ALCCLVENYQTETGLVIPEVLRPYMQGREFIEFARELPPAK 446
>gi|344301184|gb|EGW31496.1| Seryl-tRNA synthetase, cytoplasmic [Spathaspora passalidarum NRRL
Y-27907]
Length = 461
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/481 (38%), Positives = 243/481 (50%), Gaps = 109/481 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F EKGG+P+K++++QK R +VELVD++I +W + R D NK N
Sbjct: 1 MLDINAFLVEKGGNPDKIKESQKKRGASVELVDEIINGYTEWTKIRFDLDEQNKKLNAIQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K IG+K KAKE D+S L GN +H SV
Sbjct: 61 KEIGKKFKAKE---DASELVAEKEKLAAGKKDLIEKEAQADSALRFKVNQVGNIVHDSVV 117
Query: 91 VSNNEDENGIVRT--KGDTEVRK---------KYSHVDLITMIDGVDSEAGAIVAGGRGY 139
VS +ED N +VRT EV + K SH +++ +DG D E G + G RGY
Sbjct: 118 VSMDEDNNELVRTWIPEGYEVAQVGAASGKPAKLSHHEVLLRLDGYDPERGVRIVGHRGY 177
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
FL+ V L L+ Y L Y PL P M KEVM + AQL+QFDEELYKV+
Sbjct: 178 FLRNWGVFLNQALINYGLHFLSSNDYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVL--- 234
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED--- 254
D D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E
Sbjct: 235 ----------DGEDEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGSH 284
Query: 255 --------------------LTK----------------------SIAYRVVNIVSGALN 272
LT+ + YRVV IVSG LN
Sbjct: 285 GKDAWGIFRVHAFEKIEQFVLTEPEKSWQEFDRMIGLSEQFYQSLKLPYRVVGIVSGELN 344
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ + ++VH LN+T
Sbjct: 345 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 404
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
AT R +C ILE +QTE G+ +P+ LRK++P E I F K P + KK+ +
Sbjct: 405 TATERTLCCILENYQTEDGLIVPEVLRKYIPG----EPEFIEFAKELPKNSTSNKKKDGK 460
Query: 393 K 393
K
Sbjct: 461 K 461
>gi|393227215|gb|EJD34904.1| serine-tRNA ligase [Auricularia delicata TFB-10046 SS5]
Length = 453
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 189/461 (40%), Positives = 239/461 (51%), Gaps = 100/461 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIE--NDLKWRQFRHKADNFNKFKNL 59
+LD+ F T+KGGDPE +R++Q+ R VE+VD+VIE N ++F +A K N
Sbjct: 1 MLDVLNFLTDKGGDPEAIRESQRRRGHRVEVVDEVIELYNQKIKQEFDLQA--LLKSINT 58
Query: 60 CSKVIGEKMKAKEP----VGDSSTLP------------------------GNHLHPSVPV 91
K IG K KAKE V TL GN + P PV
Sbjct: 59 IQKEIGAKKKAKENADELVAQKKTLDDKVPELRKAAVELDAALTKLLISIGNIVGPKTPV 118
Query: 92 SNNEDENGIVRT------KGDTEVRKK-YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
S ED+N +RT G + R H +++ +D VD E G VAG RGY+L
Sbjct: 119 SQTEDDNTTLRTWHPDGPNGQVQQRTDILPHHEVLLRLDAVDLERGQKVAGHRGYYLTND 178
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
+ L L+ Y L ++GY + PFFMRK+ M + AQL QFDEELYKV G
Sbjct: 179 GLDLNQALISYGLDFLRKRGYKKIMPPFFMRKDAMAKTAQLEQFDEELYKVTG------- 231
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE--------- 253
DE DDKYLIATSEQPI A+H D W PE LPI+Y G STCFR+E
Sbjct: 232 -----DE-DDKYLIATSEQPISALHSDEWFESPEKQLPIKYAGYSTCFRKEAGAHGRDTW 285
Query: 254 ---------------------------DLTKS---------IAYRVVNIVSGALNHAAAK 277
D+ + I YRVV IVSGALN AAA
Sbjct: 286 GIFRVHQFEKVEQFIITEPEKSWATLDDMIANSEAFYQSLGIPYRVVAIVSGALNLAAAT 345
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLEAWFP GA++ELVSCSNC DYQSRRL VR G K+ + + +VHMLN T CAT R
Sbjct: 346 KYDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLRKQGDTRKNYVHMLNGTLCATER 405
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAV-YVNEAGEIPFVK 377
+C ++E +QTETG+ IP+ LR ++ ++ E+P K
Sbjct: 406 ALCCLVENYQTETGLVIPEVLRPYMQGRDFIEFTKEVPPAK 446
>gi|320583800|gb|EFW98013.1| Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase
[Ogataea parapolymorpha DL-1]
Length = 464
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 185/482 (38%), Positives = 245/482 (50%), Gaps = 114/482 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F EKGG+P+ +R++Q+ R +VE+VD++I+ W + R D NK +N
Sbjct: 1 MLDIIQFIEEKGGNPQAIRESQRKRGASVEIVDEIIKEYNDWTKLRFTLDELNKTQNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+K KAK D+S L GN +H SV
Sbjct: 61 KEIGQKFKAK---LDASELLQKKDDLVKEKAEITAKEQEADKKLRWKVFQVGNIVHDSVI 117
Query: 91 VSNNEDENGIVRTKGDTEV--------------RKKYSHVDLITMIDGVDSEAGAIVAGG 136
S +E +N +VRT + V + K SH +++ +DG D E G + G
Sbjct: 118 DSLDEADNKLVRTWAPSGVNFETLSNVATATGKQAKLSHHEVLLRLDGYDPERGVKIVGH 177
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVI 196
RGYFL+ V L L+ Y LS K YTP+ P M K+VM + AQL++FDEELYKV+
Sbjct: 178 RGYFLRNYGVFLNQALINYGLSFLTSKNYTPMQAPVMMNKDVMAKTAQLSEFDEELYKVL 237
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ-- 252
GD D+KYLIATSEQPI A H + W P LPIRY G S+CFR+
Sbjct: 238 D-----GD--------DEKYLIATSEQPISAYHSNEWFESPAEQLPIRYAGYSSCFRREA 284
Query: 253 -----------------------------------------EDLTKSIA--YRVVNIVSG 269
E+ +S+ YRVV+IVSG
Sbjct: 285 GSHGKDAWGIFRVHAFEKVEQFCISEPEKSWDEFDRMIQNSEEFYQSLGLPYRVVSIVSG 344
Query: 270 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEK-IEFVHML 328
LN+AAAKK DLEAWFP F+ELVSCSNC DYQSR L +R G K MN+K ++VH L
Sbjct: 345 ELNNAAAKKYDLEAWFPFQQEFKELVSCSNCTDYQSRNLEIRCG-IKAMNQKEKKYVHCL 403
Query: 329 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 388
N T CAT R +C +LE +QT+ G+ +P LRK++P E IPFV P + K+
Sbjct: 404 NCTLCATERALCCVLENYQTDDGLVVPKVLRKYIPG----EPEFIPFVNELPKNSTSAKR 459
Query: 389 QK 390
K
Sbjct: 460 GK 461
>gi|255943689|ref|XP_002562612.1| Pc20g00490 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587347|emb|CAP85378.1| Pc20g00490 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 470
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 179/475 (37%), Positives = 246/475 (51%), Gaps = 99/475 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL F TE+GGD +K++++Q+ RF E VD+V+ + R+ R+ N
Sbjct: 1 MLDLADFVTERGGDIKKIKESQQKRFAPEEAVDEVVALYEEARRARYDVTQMGSQINGVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D++ L GN++H SVP
Sbjct: 61 KAIGMKKKNKE---DATELLAQKAELETKKKELEEAAVAKEVQRDRKIRTIGNYVHESVP 117
Query: 91 VSNNEDENGIVRT--KGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
VSN+E +N +++T E++K SH +++T +DG D E G + G RGY L G +
Sbjct: 118 VSNDEADNKLIKTWTPEGAEMQKPGCLSHHEVLTRLDGYDPERGVKIVGHRGYCLTGYGL 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L + L+ Y L KGYTP P FM K++M + AQL QFDEELYKV
Sbjct: 178 FLNLALINYGLEFLFNKGYTPNQPPQFMLKDLMAKTAQLEQFDEELYKV----------T 227
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------ 254
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E
Sbjct: 228 ESEDKSTDKYLIATSEQPLSALHDSEWLQDKDLPIKYAGYSTCYRKEAGSHGKDAWGIFR 287
Query: 255 -----------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDL 281
LTK + Y +V IVSGALN+AA+KK DL
Sbjct: 288 VHQFEKIEQFVLTKPEDSWQAFEDMMNTSEEFYQSLKLPYNIVAIVSGALNNAASKKYDL 347
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP ++ELVSCSNC DYQ+R L +RYG K + K +VH LN+T CAT R +C
Sbjct: 348 EAWFPFQQEYKELVSCSNCTDYQARALEIRYGAKKATDLKKTYVHALNSTLCATERTLCC 407
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQKEG 395
+LE +Q E G+ +P+ LRK++P A E +P+ K P D +K + K +G
Sbjct: 408 VLENYQKEDGIEVPEVLRKYIPG-----APEFLPYTKELPKDTTSSKAKAKANKG 457
>gi|68471848|ref|XP_719967.1| potential serine tRNA synthetase [Candida albicans SC5314]
gi|46441814|gb|EAL01108.1| potential serine tRNA synthetase [Candida albicans SC5314]
Length = 458
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/470 (38%), Positives = 233/470 (49%), Gaps = 104/470 (22%)
Query: 8 FRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEK 67
F ++GGDPE ++ +QK R +VELVD++I +W + R D NK N K IG++
Sbjct: 3 FSLKRGGDPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKR 62
Query: 68 MKAKEPVGD----------------------------SSTLPGNHLHPSVPVSNNEDENG 99
KAKE D GN +H SV S +E+ N
Sbjct: 63 FKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESVVDSQDEENNE 122
Query: 100 IVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+VRT +K K SH +++ +DG D E G + G RGYFL+ V
Sbjct: 123 LVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDGYDPERGVRIVGHRGYFLRNYGVF 182
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L L+ Y LS KGY PL P M KEVM + AQL+QFDEELYKVI
Sbjct: 183 LNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVI----------- 231
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED----------- 254
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E
Sbjct: 232 --DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIF 289
Query: 255 ------------LTK----------------------SIAYRVVNIVSGALNHAAAKKLD 280
LT+ + YRVV IVSG LN+AAAKK D
Sbjct: 290 RVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYD 349
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
LEAWFP ++ELVSCSNC DYQSR L +R G ++ ++ ++VH LN+T AT R IC
Sbjct: 350 LEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTIC 409
Query: 341 AILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 410 CILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 455
>gi|452841477|gb|EME43414.1| hypothetical protein DOTSEDRAFT_72722 [Dothistroma septosporum
NZE10]
Length = 491
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 179/463 (38%), Positives = 242/463 (52%), Gaps = 98/463 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADN--------- 52
+LD++ F E+GG+PEK++++Q+ R VE+VD+VI RQ ++ A
Sbjct: 1 MLDVNDFIKERGGNPEKIKESQRRRHAPVEVVDEVIAMFEDHRQTQYAAGTEMGAKLNKV 60
Query: 53 ----------------FNKFKNLCSKVIGEKMKAKEPVGDSSTLP--------GNHLHPS 88
F K K + EK + E V + + GN++H +
Sbjct: 61 QKDMGLNKKTKGDPAEFQKLKQEKDDLTKEKQRL-EKVAEENYAALLKKIKSIGNYVHDT 119
Query: 89 VPVSNNEDENGIVRTKG--DTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
VP+S+NED N + R T+V KK SH +++T +DG D+E G + G RGYFL
Sbjct: 120 VPLSDNEDNNRLERAWAPEGTKVEKKDCLSHHEVLTRLDGYDAERGVKIVGHRGYFLTNY 179
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
L L+QY + +KGY P P+FM +E M + AQL QF EELYKV K
Sbjct: 180 GWFLNQALIQYGMQFLFKKGYRPNQPPYFMLREAMAKTAQLEQFHEELYKVTEK------ 233
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------ 252
+ D DKYLIATSEQPI A+H WL + LPI+Y G ST FR+
Sbjct: 234 ---DNDPASDKYLIATSEQPISAMHEGEWLNDKDLPIKYGGYSTNFRKEAGSHGKDAWGL 290
Query: 253 -------------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKL 279
E+ KS + YRVV IVSGALN+AAAKK
Sbjct: 291 FRIHQFEKIEQFIFCKPDDSWTHFDAMINTSEEFYKSLNLPYRVVAIVSGALNNAAAKKY 350
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE--FVHMLNATACATTR 337
DLEAWFP G ++ELVSCSNC DYQ+R L VR+GQ K+ + + +VH LN+T CAT R
Sbjct: 351 DLEAWFPFQGEYKELVSCSNCTDYQTRELEVRFGQKKQTDASFQKTYVHALNSTLCATER 410
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+C +LE +QTE G+ +P+ LRKF+P N +PFV+ P
Sbjct: 411 ALCCVLENYQTEEGLIVPEVLRKFMP----NNEEFLPFVRELP 449
>gi|154335764|ref|XP_001564118.1| putative seryl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061152|emb|CAM38174.1| putative seryl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 474
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 186/474 (39%), Positives = 237/474 (50%), Gaps = 130/474 (27%)
Query: 1 MVLDLDLFRTEKGGDPEK---VRKNQKDRFKNVELVDKVIENDLKWR--QFRHKAD---- 51
M LD+ LFR DPE VR++++ R+ E+VDK+IE D WR QF +A
Sbjct: 1 MGLDIQLFR-----DPEMADVVRESERRRYAKPEIVDKIIEVDKHWRRTQFLTEASKKMI 55
Query: 52 ------------------------------------NFNKFKNLCSKVIGEKMKA----- 70
+ K ++LC + E KA
Sbjct: 56 NTCSKAVGAKKKAKEADGDSSEVPADVMSAAQEGTLDAQKLESLCILQLKELSKALTTQV 115
Query: 71 ---------KEPVGDSSTLP-GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLI 119
+E D + GN LH SVPVSN+E+ N +VRT GD R K +HVD +
Sbjct: 116 EGLAKLAAEQEAERDRMVISVGNVLHESVPVSNDENTGNVVVRTFGDVTRRMKMTHVDCM 175
Query: 120 TMIDGVD-SEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEV 178
+ +D S+ +AGGR + L+G V LQ L+ YAL+ I +GY P Y PFF+ KE
Sbjct: 176 ERLGLMDTSKTVTAMAGGRAFVLRGGLVQLQFALISYALNFLIARGYEPFYPPFFLNKEY 235
Query: 179 MQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEAS 238
M VAQL++FDE LYKV G G D+KYLIATSE PI A H + W E +
Sbjct: 236 MGAVAQLSEFDESLYKVSGDG-------------DEKYLIATSEAPIAAYHTNKWFTEMN 282
Query: 239 LPIRYLGVSTCFRQE--------------------------------------------- 253
PI+Y GVS+CFR+E
Sbjct: 283 EPIKYAGVSSCFRKEAGAHGRDTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMMQTSQ 342
Query: 254 DLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVR 311
D +S+ YRV+NI SGALN+AAAKK DLEAWFPGSGAFRELVSCSNC DYQ+R + R
Sbjct: 343 DFNESLGLPYRVINICSGALNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARSVNCR 402
Query: 312 YGQTKK---MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFV 362
+G K N E+ HMLN T CA TR +C I E +QTE G+ IP+ LR F+
Sbjct: 403 FGPNTKGSTANNTKEYCHMLNGTLCAVTRTMCCICENYQTEEGIVIPEVLRPFM 456
>gi|408389999|gb|EKJ69416.1| hypothetical protein FPSE_10406 [Fusarium pseudograminearum CS3096]
Length = 469
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 185/479 (38%), Positives = 247/479 (51%), Gaps = 99/479 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F E+GG+PEK+R++Q+ R VELVD+VI R+ ++ N
Sbjct: 1 MLDIEDFIEERGGNPEKIRESQRRRHAPVELVDEVIALWQDARKTQYGVTQIGTQINGVQ 60
Query: 62 KVIGEKMKAKEPVGDS----------------------------STLPGNHLHPSVPVSN 93
K IG K +AKE D + L GN++H SV VS+
Sbjct: 61 KEIGLKKRAKEDATDLLKEKEELTEKKKKQEELAAAKNAELKVKAKLVGNYVHDSVHVSD 120
Query: 94 NEDENGIVRTKG----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N I RT D + SH D++ I G D G + G RGY L G +
Sbjct: 121 NEDNNTIERTWAPETFDKTTQAALSHHDVLLRIGGYDPVRGVKLVGHRGYCLTG--YGMN 178
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV YA S KGYTP PF + ++ M + AQL+QFDEELY+V P
Sbjct: 179 LALVNYATSFLFNKGYTPNQPPFMLNRDQMAKTAQLSQFDEELYRV--------SEGPTP 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
E D+YLIATSEQP+ A+H + W+ A LPI+Y G STCFR+
Sbjct: 231 SE-SDRYLIATSEQPLSALHAEEWIQPAELPIKYCGYSTCFRKEAGSHGRDAWGVFRVHQ 289
Query: 253 --------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAW 284
E+ KS+ Y+VV IV+GALN+AAAKK DLEAW
Sbjct: 290 FEKVEQFVLCGPDDSWDQFDQMMANSEEFYKSLGLPYQVVGIVTGALNNAAAKKYDLEAW 349
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMN----EKIEFVHMLNATACATTRVIC 340
FP ++ELVSCSNC DYQ+R L +R+G K K E+VH LNAT CAT R +C
Sbjct: 350 FPFQKEYKELVSCSNCTDYQTRELEIRHGAKKGKQIVGGGKKEYVHALNATLCATERTLC 409
Query: 341 AILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 399
ILE +QTE G+ +P+ LRK++P E +PF+K AP +E +K +K+ G K+K
Sbjct: 410 CILENYQTEEGLVVPEVLRKYIPG----EPDFLPFIKEAP---KEAEKAEKKDAGKKEK 461
>gi|449301514|gb|EMC97525.1| hypothetical protein BAUCODRAFT_23800 [Baudoinia compniacensis UAMH
10762]
Length = 491
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 180/474 (37%), Positives = 244/474 (51%), Gaps = 98/474 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIE--NDLKWRQF------------- 46
+LD++ F E+GGDP K++++Q+ R+ ++VD+VIE D + Q+
Sbjct: 1 MLDVNDFIKERGGDPAKIKESQRRRYAPEQVVDEVIEMFEDHRKTQYAAATEMGAKINKV 60
Query: 47 --------RHKAD--NFNKFKNLCSKVIGEKMKAKEPVGDSST-------LPGNHLHPSV 89
++K D F K ++ EK + +E T GN++H SV
Sbjct: 61 QKDIGLNKKNKGDPEEFKKLMEEKDRLAEEKKQLEESAQQKHTALLRKVKTIGNYVHESV 120
Query: 90 PVSNNEDENGIVRTKGDTE---VRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
PV++NED N ++R K + E V KK SH +++T +DG D E G + G RGY L
Sbjct: 121 PVNDNEDHNAVIR-KWEPEGVAVEKKDCLSHHEVLTRLDGYDPERGVKIVGHRGYCLTEY 179
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
L L Y + E+ Y P PFFM +E M + AQL QFDEELYKV K
Sbjct: 180 GFFLNRALQSYGMDFLFERKYKPNQPPFFMLREAMAKTAQLEQFDEELYKVTEK------ 233
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------- 254
E D DKYLIATSEQPI A+H WL LPI+Y G STCFR+E
Sbjct: 234 ---ENDPASDKYLIATSEQPISALHEGEWLNATDLPIKYAGFSTCFRKEAGSHGKDAWGI 290
Query: 255 -----------------------------------LTKSIAYRVVNIVSGALNHAAAKKL 279
T +I YRVV IVSGALN+AA+KK
Sbjct: 291 FRVHQFEKIEQFVFCKPEDSWNHFDEMIATSEAFYKTLNIPYRVVAIVSGALNNAASKKY 350
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE--FVHMLNATACATTR 337
DLEAWFP G ++ELVSCSNC DYQ+R L +R+GQ K+ + + +VH LN+T CAT R
Sbjct: 351 DLEAWFPFQGEYKELVSCSNCTDYQTRELEIRFGQKKQTDASFQKSYVHALNSTLCATER 410
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
+C +LE +QTE G+ +P+ LRK++P + +PF K P D K + K
Sbjct: 411 ALCCVLENYQTEDGIVVPEVLRKYIPG----QPEFLPFTKELPKDSTSLKAKGK 460
>gi|83317733|ref|XP_731290.1| seryl-tRNA synthetase [Plasmodium yoelii yoelii 17XNL]
gi|23491277|gb|EAA22855.1| seryl-tRNA synthetase [Plasmodium yoelii yoelii]
Length = 534
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 260/539 (48%), Gaps = 167/539 (30%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFRTEKGG+PEK+++++K+RF +V VDKVIE D KWR+ K + K NL
Sbjct: 1 MVLDINLFRTEKGGNPEKIKESEKNRFNDVSNVDKVIEYDEKWRKSIFKLEELKKNINLI 60
Query: 61 SKVIGEKMKA----------KEPVGDSSTLP--------------------GNHLHPSVP 90
+K IG K K ++ + +P GN L V
Sbjct: 61 NKTIGNKKKEDKNADVEDLKQKSLSMKEEIPLIQNEEKHLLKQRNMYLAKVGNILSSKVV 120
Query: 91 VSNNEDENGIVRTKGD---------------------------------------TEVRK 111
++N+ED N IVRT G+ +E++K
Sbjct: 121 INNDEDHNKIVRTWGECKNYEATDLEKSDINKEDTPNTKREVSNNNDGQNKVSIISEIKK 180
Query: 112 KYS-HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYT 170
KY H DL+ I GV+ + G +VAG RGY+L G L ++QYA++ + K YTP+Y
Sbjct: 181 KYYYHYDLLRKIGGVNFKKGVLVAGHRGYYLTGAGFLLNNAIMQYAINFLVNKKYTPVYP 240
Query: 171 PFFMRKEVMQEVAQLAQFDEELYKV----IGKGE------KVGDSAPEKDELDDKYLIAT 220
PFFM+K +M+E A+L F+E LYK+ + E + + EK DD +LIAT
Sbjct: 241 PFFMKKTIMEECAELNDFEETLYKISSSSVASAEDKTIATNSNNVSNEKSNRDDLFLIAT 300
Query: 221 SEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---------------------------- 252
SEQP+CA+HRD L LP++Y+G+S+CFR+
Sbjct: 301 SEQPLCALHRDETLESRYLPLKYVGISSCFRKEAGAHGKDIRGILRVHQFDKVEQFCISL 360
Query: 253 --------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELV 295
E++ K+ I Y++VNIVSGALN+AAA K D+E +FP SG +RELV
Sbjct: 361 PQTSYKLHEEMIKTCEEFYQSLNIPYKIVNIVSGALNNAAALKYDIEGYFPTSGQYRELV 420
Query: 296 SCSNCLDYQSRRLLVRY--------GQTKKMNEKIE------------------------ 323
SCSNC DYQS L +RY G TK +K E
Sbjct: 421 SCSNCTDYQSINLNIRYTDSNIKISGITKSSKDKNEENTKDETKDEYVDSEYEKFNHDFP 480
Query: 324 -----FVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
+VH+LN T A R +C +LE +Q G+ +P+ LR Y+N IPF++
Sbjct: 481 IENKNYVHLLNGTMVAGQRFLCCLLENYQNGEGIIVPEKLRP-----YMNNTEFIPFIE 534
>gi|340507317|gb|EGR33298.1| seryl-tRNA synthetase, putative [Ichthyophthirius multifiliis]
Length = 460
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 178/462 (38%), Positives = 239/462 (51%), Gaps = 90/462 (19%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD++ FR E+GG+P KVR++QK R +ELVD+VI D W + + + K N
Sbjct: 1 MGLDINEFRPERGGNPNKVRESQKKRNAKIELVDEVIALDKGWVKTQFNYEAARKELNEK 60
Query: 61 SKVIGEKMKAK----------------------EPVGDSSTLP--------GNHLHPSVP 90
K+IGE+ KA + + + L GN +H +VP
Sbjct: 61 KKLIGERKKANKNDTCDELMKEKEEIEQKIEQLQQINVQAKLNLDEKLKKIGNIVHDTVP 120
Query: 91 VSNNEDENGIVRTKGDTEVRK------KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
V NNED N I RT G+ + + K H ++ M+DG D + G+ V G RGY+LK
Sbjct: 121 VDNNEDNNRIERTWGEKRILQIDETPGKAHHHQILYMLDGFDQKRGSKVVGHRGYYLKNY 180
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV-IGKGEKVG 203
V L L+ + ++K YTP+ TPFFM+K +M E QL+ FD++LYKV GK E+
Sbjct: 181 GVILVQALLNFGQQFLMKKAYTPIQTPFFMKKSIMAETCQLSDFDDQLYKVECGKPEESK 240
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------- 252
+ E+ E D YLIATSEQPI A H ++ LPIRY G+S+CFR+
Sbjct: 241 EGKTEQTE--DFYLIATSEQPISAYHGGEYIDNKELPIRYAGLSSCFRKEAGAAGKETWG 298
Query: 253 -------------------------EDLTK---------SIAYRVVNIVSGALNHAAAKK 278
E++ K + YR+VNIVSGALN AAAKK
Sbjct: 299 IYRVHQFEKIEQFVLCKPEDSWQELENMIKISEEFMQALGLPYRIVNIVSGALNDAAAKK 358
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLEAWFPG ++ELVSCSNC D+QSR L V G K + FVHMLN T CA R
Sbjct: 359 YDLEAWFPGYSQYKELVSCSNCTDFQSRGLNVTTGDVKDKKAEKVFVHMLNGTLCAAQRT 418
Query: 339 ICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+ ILE +Q + GVR+P L+ FV + IP+ + P
Sbjct: 419 LTCILENYQEKDGVRVPQVLQPFVGVDF------IPYRQGMP 454
>gi|157929912|gb|ABW04144.1| Seryl-tRNA synthetase [Epinephelus coioides]
Length = 342
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 163/309 (52%), Positives = 190/309 (61%), Gaps = 58/309 (18%)
Query: 82 GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+EDE N + RT GD ++KYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 44 GNLLHPSVPISNDEDEDNRVERTWGDCAAQRKYSHVDLVVMVDGYEGEKGAVVAGSRGYF 103
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKGP V L+ L+QYAL K YTPLYTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 104 LKGPLVFLEQALIQYALQTLYMKKYTPLYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 163
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
+ D + LD+KYLIATSEQPI A R+ WL LP+RY G+STCFRQ
Sbjct: 164 ERSDDS----SLDEKYLIATSEQPIAAFLREEWLKPEDLPLRYAGISTCFRQEVGSHGRD 219
Query: 253 -------------------------------------EDLTKS--IAYRVVNIVSGALNH 273
E+ +S I YR+VNIVS ALNH
Sbjct: 220 TRGIFRVHQFEKIEQFVFSSPHDNKSWEMFDEMIGTAEEFYQSLGIPYRIVNIVSRALNH 279
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
AA+KKLDLEAWFPGS AFRELVS ++C DY+ + QT+ M H A C
Sbjct: 280 AASKKLDLEAWFPGSSAFRELVS-AHCTDYRP-GVCASLRQTEMMTASCAHAH---AHVC 334
Query: 334 ATTRVICAI 342
TTRVI I
Sbjct: 335 -TTRVIWRI 342
>gi|238503390|ref|XP_002382928.1| seryl-tRNA synthetase [Aspergillus flavus NRRL3357]
gi|317138770|ref|XP_001817126.2| seryl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
gi|220690399|gb|EED46748.1| seryl-tRNA synthetase [Aspergillus flavus NRRL3357]
Length = 474
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 243/469 (51%), Gaps = 93/469 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F +++GG+P KV+++Q+ RF +VD+++ + R+ R++ N
Sbjct: 1 MLDIADFVSDRGGNPNKVKESQRKRFAPESVVDEILTLYEEARRARYEVMQIGSQLNGLQ 60
Query: 62 KVIG--------------EKMKAKEPVGDSSTLP--------------GNHLHPSVPVSN 93
K IG EK ++ D+ L GN++H SVPVSN
Sbjct: 61 KEIGKKKKNKEDASSLLEEKAALEQRKKDAEDLALQKEKQRDSKLRTIGNYVHDSVPVSN 120
Query: 94 NEDENGIVRT----KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED+N +V+T E R SH +++T +DG D E G + G RGY L G + L
Sbjct: 121 NEDDNVVVKTWVPENVTVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L+ Y L KGY P P FM K++M + AQL QFDEELYKV +
Sbjct: 181 LALINYGLEFLWGKGYKPNQPPQFMLKDMMAKTAQLEQFDEELYKV----------TESE 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED--------------- 254
D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E
Sbjct: 231 DKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 255 --------LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
LTK + Y++V IVSGALN+AA+KK DLEAW
Sbjct: 291 FEKIEQFVLTKPEQSWEAFEEMMATSEEFYKSLGLPYQIVTIVSGALNNAASKKYDLEAW 350
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +RYG K + K +VH LNAT CAT R +C ILE
Sbjct: 351 FPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCCILE 410
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQ 392
+Q E G +P+ LRK++P A E +P+ K P D K + KQ
Sbjct: 411 NYQKEDGFIVPEPLRKYIPG-----APEFLPYTKELPKDSTSQKAKGKQ 454
>gi|344233176|gb|EGV65049.1| serine-tRNA ligase [Candida tenuis ATCC 10573]
gi|344233177|gb|EGV65050.1| hypothetical protein CANTEDRAFT_113376 [Candida tenuis ATCC 10573]
Length = 461
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 180/478 (37%), Positives = 248/478 (51%), Gaps = 107/478 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F +KGG+PE+++++Q+ R +VE+VD++I + +W + R D NK N
Sbjct: 1 MLDINQFIPDKGGNPEEIKESQRKRGDSVEVVDEIIADYKEWTKIRFDLDEVNKKTNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+K K KE D+S L GN +H SV
Sbjct: 61 KDIGQKFKKKE---DASELLKEKDQLIEEKKQLIEAEQKADKALRAKVNTVGNIVHKSVV 117
Query: 91 VSNNEDENGIVRT---KGDTEVRK---------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
VS +E N +V+ +G E+ + K SH +++ +DG D E G + G RG
Sbjct: 118 VSQDEANNELVKLWKPEGLEEITQVAAATNKPAKLSHHEVLLRLDGYDPERGVRIVGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFL+ V L ++ Y LS + YTPL P M K+VM + AQL+QFDEELY
Sbjct: 178 YFLRNYGVFLNQAMINYGLSFLAKNDYTPLQAPVMMNKDVMAKTAQLSQFDEELY----- 232
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
KV D E+DE KYLIATSEQPI A H + W P+ LP+RY G S+CFR+
Sbjct: 233 --KVSDGPREEDE---KYLIATSEQPISAYHANEWFESPQEQLPVRYAGFSSCFRREAGS 287
Query: 253 ---------------------------------------EDLTKS--IAYRVVNIVSGAL 271
E+ +S + YRVV IVSG L
Sbjct: 288 HGKDAWGIFRVHQFEKVEQFVLAEPEKSWEEFDRMIRLSEEFYQSLKLPYRVVGIVSGEL 347
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ + ++VH LN+T
Sbjct: 348 NNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNST 407
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
AT R +C ILE +QTE G+ +P+ LRK++P E +PFVK P + KK+
Sbjct: 408 LTATERALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVKELPKNSTSNKKK 461
>gi|146079628|ref|XP_001463813.1| putative seryl-tRNA synthetase [Leishmania infantum JPCM5]
gi|134067901|emb|CAM66182.1| putative seryl-tRNA synthetase [Leishmania infantum JPCM5]
Length = 474
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 185/474 (39%), Positives = 239/474 (50%), Gaps = 130/474 (27%)
Query: 1 MVLDLDLFRTEKGGDPEK---VRKNQKDRFKNVELVDKVIENDLKWR--QFRHKAD---- 51
M LD+ LFR DPE VR++++ R+ E+VD +IE D +WR QF +A
Sbjct: 1 MGLDIQLFR-----DPEMADIVRESERRRYARPEIVDDIIEIDKRWRRTQFLTEASKKMI 55
Query: 52 ------------------------------------NFNKFKNLC-------SKVIGEKM 68
+ K ++LC SK + ++
Sbjct: 56 NTCSKAVGAKKKAKEADGDVSEVPADVMSAAREGTLDTEKLESLCILQLKQLSKALATQV 115
Query: 69 KA-------KEPVGDSSTLP-GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLI 119
++ +E D + GN LH SVPVSN+E+ N +VRT GD R K +HVD +
Sbjct: 116 ESLAKLAAEQEAERDRMVISVGNVLHESVPVSNDEETGNVVVRTFGDVTRRLKMTHVDCM 175
Query: 120 TMIDGVD-SEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEV 178
+ +D S+A +AGGR + L+G V LQ L+ YAL+ I +GY P Y PFF+ KE
Sbjct: 176 ERLGLMDTSKAVTAMAGGRAFVLRGGLVQLQFALISYALNFLIARGYEPFYPPFFLNKEY 235
Query: 179 MQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEAS 238
M VAQL+ FDE LYKV G G D+KYLIATSE PI A H + W E
Sbjct: 236 MGAVAQLSDFDESLYKVSGDG-------------DEKYLIATSEAPIAAYHTNKWFTEMK 282
Query: 239 LPIRYLGVSTCFRQE--------------------------------------------- 253
PI+Y GVS+CFR+E
Sbjct: 283 EPIKYAGVSSCFRKEAGAHGRDTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMIQTSQ 342
Query: 254 DLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVR 311
D +S+ YRV+NI SGALN+AAAKK DLEAWFPGSGAFRELVSCSNC DYQ+R + R
Sbjct: 343 DFNESLGLPYRVINICSGALNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARSVNCR 402
Query: 312 YGQTKK---MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFV 362
+G K N E+ HMLN T CA TR +C I E +QTE G+ IP+ LR F+
Sbjct: 403 FGPNTKGSTANSTKEYCHMLNGTLCAVTRTMCCICENYQTEEGILIPEVLRPFM 456
>gi|398011586|ref|XP_003858988.1| seryl-tRNA synthetase, putative [Leishmania donovani]
gi|322497200|emb|CBZ32273.1| seryl-tRNA synthetase, putative [Leishmania donovani]
Length = 474
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 185/474 (39%), Positives = 239/474 (50%), Gaps = 130/474 (27%)
Query: 1 MVLDLDLFRTEKGGDPEK---VRKNQKDRFKNVELVDKVIENDLKWR--QFRHKAD---- 51
M LD+ LFR DPE VR++++ R+ E+VD +IE D +WR QF +A
Sbjct: 1 MGLDIQLFR-----DPEMADIVRESERRRYARPEIVDDIIEIDKRWRRTQFLTEASKKMI 55
Query: 52 ------------------------------------NFNKFKNLC-------SKVIGEKM 68
+ K ++LC SK + ++
Sbjct: 56 NTCSKAVGAKKKAKEADGDVSEVPADVMSAAREGTLDTEKLESLCILQLKQLSKALATQV 115
Query: 69 KA-------KEPVGDSSTLP-GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLI 119
++ +E D + GN LH SVPVSN+E+ N +VRT GD R K +HVD +
Sbjct: 116 ESLAKLAAEQEAERDRMVISVGNVLHESVPVSNDEETGNVVVRTFGDVTRRLKMTHVDCM 175
Query: 120 TMIDGVD-SEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEV 178
+ +D S+A +AGGR + L+G V LQ L+ YAL+ I +GY P Y PFF+ KE
Sbjct: 176 ERLGLMDTSKAVTAMAGGRAFVLRGGLVQLQFALISYALNFLIARGYEPFYPPFFLNKEY 235
Query: 179 MQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEAS 238
M VAQL+ FDE LYKV G G D+KYLIATSE PI A H + W E
Sbjct: 236 MGAVAQLSDFDESLYKVSGDG-------------DEKYLIATSEAPIAAYHTNKWFTEMK 282
Query: 239 LPIRYLGVSTCFRQE--------------------------------------------- 253
PI+Y GVS+CFR+E
Sbjct: 283 EPIKYAGVSSCFRKEAGAHGRDTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMIQTSQ 342
Query: 254 DLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVR 311
D +S+ YRV+NI SGALN+AAAKK DLEAWFPGSGAFRELVSCSNC DYQ+R + R
Sbjct: 343 DFNESLGLPYRVINICSGALNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARSVNCR 402
Query: 312 YGQTKK---MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFV 362
+G K N E+ HMLN T CA TR +C I E +QTE G+ IP+ LR F+
Sbjct: 403 FGPNTKGSTANSTKEYCHMLNGTLCAVTRTMCCICENYQTEEGIVIPEVLRPFM 456
>gi|6320226|ref|NP_010306.1| serine--tRNA ligase SES1 [Saccharomyces cerevisiae S288c]
gi|1711650|sp|P07284.2|SYSC_YEAST RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|642295|emb|CAA87802.1| Ses1p [Saccharomyces cerevisiae]
gi|1216231|emb|CAA65216.1| seryl-tRNA synthetase [Saccharomyces cerevisiae]
gi|1431454|emb|CAA98844.1| SES1 [Saccharomyces cerevisiae]
gi|151942011|gb|EDN60367.1| seryl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
gi|190405003|gb|EDV08270.1| serine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
gi|256273249|gb|EEU08192.1| Ses1p [Saccharomyces cerevisiae JAY291]
gi|285811045|tpg|DAA11869.1| TPA: serine--tRNA ligase SES1 [Saccharomyces cerevisiae S288c]
gi|323334270|gb|EGA75652.1| Ses1p [Saccharomyces cerevisiae AWRI796]
gi|323355800|gb|EGA87614.1| Ses1p [Saccharomyces cerevisiae VL3]
gi|349577093|dbj|GAA22262.1| K7_Ses1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300137|gb|EIW11228.1| Ses1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 462
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 237/469 (50%), Gaps = 110/469 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F +KGG+PE +R++QK R +VE+VD++I + W + R + D NK N
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D+S L GN +HPSV
Sbjct: 61 KDIGLKFKNKE---DASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVV 117
Query: 91 VSNNEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSN+E+ N +VRT ++ SH +++ +DG D + G + G RG
Sbjct: 118 VSNDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YF + V L L+ Y L KGY PL P M KE+M + AQL++FDEELYKVI
Sbjct: 178 YFFRNYGVFLNQALINYGLQFLAAKGYIPLQAPVMMNKELMSKTAQLSEFDEELYKVI-- 235
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+
Sbjct: 236 -----------DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 284
Query: 253 ---------------------------------------EDLTKS--IAYRVVNIVSGAL 271
E+ KS + YR+V IVSG L
Sbjct: 285 HGKDAWGVFRVHAFEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
AT R +C ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 405 LAATQRALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
>gi|327301447|ref|XP_003235416.1| seryl-tRNA synthetase [Trichophyton rubrum CBS 118892]
gi|326462768|gb|EGD88221.1| seryl-tRNA synthetase [Trichophyton rubrum CBS 118892]
Length = 473
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/471 (37%), Positives = 239/471 (50%), Gaps = 94/471 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ E+GGDP+KV+++Q+ RF + ELVD+V+ R+ R++A N
Sbjct: 1 MLDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSRINAVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP----------------------------GNHLHPSVPVSN 93
K IG K + KE D GN++ SVPV
Sbjct: 61 KEIGMKKRNKEDATDLLAEKAKLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPVDK 120
Query: 94 NEDENGIVRTKG--DTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N ++RT D +V K+ SH +++ +DG D E G + G RGY L G + L
Sbjct: 121 NEDNNAVLRTWAPPDVKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV Y L KGY P P FM + M + AQL QFDEELYKV +
Sbjct: 181 LALVNYGLEFLFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKV----------TESE 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+
Sbjct: 231 DPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 253 --------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAW 284
E+ KS I Y+V+ IVSGALN+AA+KKLDLEAW
Sbjct: 291 FEKIEQFLITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAW 350
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +R+G K + K + H LNAT CAT R +C ILE
Sbjct: 351 FPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILE 410
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEG 395
+Q E G+ +P+ LRK++P +P+V+ P D T QK + +G
Sbjct: 411 NYQQEDGIIVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVKAKG 454
>gi|326468899|gb|EGD92908.1| seryl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
Length = 473
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/471 (37%), Positives = 239/471 (50%), Gaps = 94/471 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ E+GGDP+KV+++Q+ RF + ELVD+V+ R+ R++A N
Sbjct: 1 MLDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSKINAVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP----------------------------GNHLHPSVPVSN 93
K IG K + KE D GN++ SVPV
Sbjct: 61 KEIGMKKRNKEDASDLLAEKAKLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPVDK 120
Query: 94 NEDENGIVRTKG--DTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N ++RT D +V K+ SH +++ +DG D E G + G RGY L G + L
Sbjct: 121 NEDNNTVLRTWAPPDVKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV Y L KGY P P FM + M + AQL QFDEELYKV +
Sbjct: 181 LALVNYGLEFLFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKV----------TESE 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+
Sbjct: 231 DPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 253 --------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAW 284
E+ KS I Y+V+ IVSGALN+AA+KKLDLEAW
Sbjct: 291 FEKIEQFLITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAW 350
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +R+G K + K + H LNAT CAT R +C ILE
Sbjct: 351 FPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILE 410
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEG 395
+Q E G+ +P+ LRK++P +P+V+ P D T QK + +G
Sbjct: 411 NYQQEDGIVVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVKAKG 454
>gi|259145268|emb|CAY78532.1| Ses1p [Saccharomyces cerevisiae EC1118]
gi|365766535|gb|EHN08031.1| Ses1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 462
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 237/469 (50%), Gaps = 110/469 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F +KGG+PE +R++QK R +VE+VD++I + W + R + D NK N
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D+S L GN +HPSV
Sbjct: 61 KDIGLKFKNKE---DASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVV 117
Query: 91 VSNNEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSN+E+ N +VRT ++ SH +++ +DG D + G + G RG
Sbjct: 118 VSNDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YF + V L L+ Y L KGY PL P M KE+M + AQL++FDE+LYKVI
Sbjct: 178 YFFRNYGVFLNQALINYGLQFLAAKGYIPLQAPVMMNKELMSKTAQLSEFDEDLYKVI-- 235
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+
Sbjct: 236 -----------DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 284
Query: 253 ---------------------------------------EDLTKS--IAYRVVNIVSGAL 271
E+ KS + YR+V IVSG L
Sbjct: 285 HGKDAWGVFRVHAFEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
AT R +C ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 405 LAATQRALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
>gi|380490092|emb|CCF36255.1| seryl-tRNA synthetase [Colletotrichum higginsianum]
Length = 461
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 182/479 (37%), Positives = 237/479 (49%), Gaps = 106/479 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIE-----NDLKWRQFRHKADNFNKF 56
+LDL F E+GGDPEK+R +Q+ R +E+VD+VI R+ ++ A
Sbjct: 1 MLDLQDFIKERGGDPEKIRDSQRRRHAPIEIVDEVIAFVSRTGKTDHRKTQYSATQIGSE 60
Query: 57 KNLCSKVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPS 88
N K IG K K KE D + GN++H S
Sbjct: 61 INAVQKEIGMKKKNKENADDLLKKKEDLQKQKKDKEDEATAKLVTLNSKAKSIGNYVHES 120
Query: 89 VPVSNNEDENGIVR-----TKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
VP+S+NED N R + + SH +IT + G DSE + G RGY L G
Sbjct: 121 VPISDNEDNNVTEREWKPEAGLGPKTEQTLSHHQVITRLAGYDSERAIKLVGHRGYCLTG 180
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
+ L L+ Y L +GYTP PFFM + M + AQL QFDEELYKV G GE
Sbjct: 181 YGLFLNQALINYGLEFLFNRGYTPNQPPFFMNRNQMAKTAQLEQFDEELYKVTGDGE--- 237
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------- 252
+KYLIATSEQP+ A+H + W+ + LPI+Y G STCFR+
Sbjct: 238 ----------EKYLIATSEQPLSALHSEEWIQGSQLPIKYAGYSTCFRKEAGKHGKEAWG 287
Query: 253 --------------------------------EDLTKSIA--YRVVNIVSGALNHAAAKK 278
E+ KS+ YRVV+IVSGALN+AAAKK
Sbjct: 288 LFRVHQFEKIEQFIFCKPEDSWKHFDEMIGASEEFYKSLGLPYRVVSIVSGALNNAAAKK 347
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-----KIEFVHMLNATAC 333
DLEAWFP ++ELVSCSNC DYQ+R L VRYG KK E + E+VH LNAT C
Sbjct: 348 YDLEAWFPFQQEYKELVSCSNCTDYQTRELEVRYG-VKKAKEAPGGGRKEYVHALNATLC 406
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
AT R +C ILE +QT G ++P+ LRK++P + +P+V P + QKK+
Sbjct: 407 ATERTLCCILENYQTPDGFKVPEVLRKYIPG----QPEFLPYVAELPKEITVVAGQKKK 461
>gi|315049187|ref|XP_003173968.1| seryl-tRNA synthetase [Arthroderma gypseum CBS 118893]
gi|311341935|gb|EFR01138.1| seryl-tRNA synthetase [Arthroderma gypseum CBS 118893]
Length = 473
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 239/471 (50%), Gaps = 94/471 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ E+GGDP+KV+++Q+ RF + ELVD+V+ R+ R++A N
Sbjct: 1 MLDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSKINAVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP----------------------------GNHLHPSVPVSN 93
K IG K + KE D GN++ SVP+
Sbjct: 61 KEIGMKKRNKEDATDLLAEKAKLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPIDK 120
Query: 94 NEDENGIVRTKG--DTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N ++RT D +V K+ SH +++ +DG D E G + G RGY L G + L
Sbjct: 121 NEDNNTVLRTWAPPDVKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV Y L KGY P P FM + M + AQL QFDEELYKV +
Sbjct: 181 LALVNYGLEFLFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKV----------TESE 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+
Sbjct: 231 DPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 253 --------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAW 284
E+ KS I Y+V+ IVSGALN+AA+KKLDLEAW
Sbjct: 291 FEKIEQFLITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAW 350
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +R+G K + K + H LNAT CAT R +C ILE
Sbjct: 351 FPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILE 410
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEG 395
+Q E G+ +P+ LRK++P +P+V+ P D T QK + +G
Sbjct: 411 NYQQEDGIIVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVKAKG 454
>gi|57899338|dbj|BAD87949.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group]
gi|57900428|dbj|BAD87664.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group]
gi|215697599|dbj|BAG91593.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 400
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 173/394 (43%), Positives = 219/394 (55%), Gaps = 95/394 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFRTEKGGDPE +R++Q++R +VELVD+VI D +WRQ + + D + N S
Sbjct: 1 MLDINLFRTEKGGDPELIRRSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTS 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K IG K+KAK+ D+S L GN +H SVP
Sbjct: 61 KEIG-KLKAKKE--DASALIQSTEEIKKRLAAKETEVQEAKGTLDAKLVTIGNIVHESVP 117
Query: 91 VSNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
VS++E N IVRT G+ + +HVDL M+D V E GA VAGGRGY+LK V L
Sbjct: 118 VSDDEANNLIVRTWGERRLEGNLKNHVDLCKMLDIVALEKGADVAGGRGYYLKDEGVLLN 177
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L+ + L+ ++G+ P+ TPFFMRKE M + AQLAQFDEELYK+ G GE
Sbjct: 178 LALINFGLAFLRKRGFKPMQTPFFMRKETMGKCAQLAQFDEELYKLTGDGE--------- 228
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
+KYLIATSEQP+CA H + A LPIRY G STCFR+
Sbjct: 229 ----EKYLIATSEQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQ 284
Query: 253 ----------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLE 282
ED K I Y++V+IVSGALN AAAKK DLE
Sbjct: 285 FEKIEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLE 344
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK 316
AWFP S +RELVSCSNC D+Q+RRL + YGQ K
Sbjct: 345 AWFPASKTYRELVSCSNCTDFQARRLGIGYGQKK 378
>gi|388581181|gb|EIM21491.1| serine-tRNA ligase [Wallemia sebi CBS 633.66]
Length = 454
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 181/474 (38%), Positives = 245/474 (51%), Gaps = 102/474 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L + KGG+PE V+++QK R+ +VELVD+V++ W +++ N N
Sbjct: 1 MIDLVLLQEAKGGNPELVKESQKKRYASVELVDEVLKLYQDWTSISYESQQLNTQINQTQ 60
Query: 62 KVIGEKMKAKEPVGDS----------------------------STLPGNHLHPSVPVSN 93
K I K K KE D + GN +H +VP+ +
Sbjct: 61 KAITAKKKNKESADDELAKKKELDSKVAGIKQQALVAEQAMKAKAVTIGNIVHTAVPIDD 120
Query: 94 NEDENGIVRT----KGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
NED N I+R + +V KK +H +++ +DG D E G +AG RGYFL+ AV
Sbjct: 121 NEDNNVILRLWHPEGPNAQVEKKEGILAHHEVLQRLDGFDLERGQKIAGHRGYFLQDTAV 180
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L + L+ Y L ++ + + TPF MRK++M + AQL QFDEELYK+ E VG
Sbjct: 181 DLNLALISYGLDFLRKRQFKKVMTPFMMRKDMMSKTAQLEQFDEELYKI----EDVGGE- 235
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ------------ 252
DDKYLIATSEQPI A+ + W P+ LPIR G STCFR+
Sbjct: 236 ------DDKYLIATSEQPISAMFANEWFEKPQDQLPIRMAGYSTCFRKEAGKHGKDTWGI 289
Query: 253 -------------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKL 279
E+ +S I YR+VNIVSGALN+AAA+K
Sbjct: 290 FRVHQFEKIEQFCVTSPEKSWEMFDEMVNNSEEFYQSLGIPYRLVNIVSGALNNAAAQKY 349
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLEAWFP G ++ELVS SNC DYQSR L VR+G K+ +VHMLN T CAT R +
Sbjct: 350 DLEAWFPYLGEWKELVSTSNCTDYQSRSLEVRHGIKKQGETNKTYVHMLNGTMCATERAM 409
Query: 340 CAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
C ++E Q E G+ +P LRK Y+++ IPFVK P +TK K +K
Sbjct: 410 CCLVENWQNEEGLVVPPVLRK-----YMDDREFIPFVKELP----KTKANKSKK 454
>gi|323338341|gb|EGA79569.1| Ses1p [Saccharomyces cerevisiae Vin13]
Length = 462
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 236/469 (50%), Gaps = 110/469 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F +KGG+PE +R++QK R +VE+VD++I + W + R + D NK N
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D+S L GN +HPSV
Sbjct: 61 KDIGLKFKNKE---DASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVV 117
Query: 91 VSNNEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSN+E+ N +VRT ++ SH +++ +DG D + G + G RG
Sbjct: 118 VSNDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YF + V L L+ Y L KGY PL P M KE+M + AQL++FDE LYKVI
Sbjct: 178 YFFRNYGVFLNQALINYGLQFLAAKGYIPLQAPVMMNKELMSKTAQLSEFDEXLYKVI-- 235
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+
Sbjct: 236 -----------DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 284
Query: 253 ---------------------------------------EDLTKS--IAYRVVNIVSGAL 271
E+ KS + YR+V IVSG L
Sbjct: 285 HGKDAWGVFRVHAFEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
AT R +C ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 405 LAATQRALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
>gi|401416979|ref|XP_003872983.1| putative seryl-tRNA synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489210|emb|CBZ24465.1| putative seryl-tRNA synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 474
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 189/497 (38%), Positives = 243/497 (48%), Gaps = 135/497 (27%)
Query: 1 MVLDLDLFRTEKGGDPEK---VRKNQKDRFKNVELVDKVIENDLKWR--QFRHKAD---- 51
M LD+ LFR DPE VR++++ R+ E+VD +IE D +WR QF +A
Sbjct: 1 MGLDIQLFR-----DPEMADIVRESERRRYAKPEIVDDIIEIDKRWRRTQFLTEASKKMI 55
Query: 52 ------------------------------------NFNKFKNLCSKVIGEKMKA----- 70
+ K ++LC + E KA
Sbjct: 56 NTCSKAVGAKKKAKEADGDVSEVPADVMSAAQEGTLDTEKLESLCVLQLKELSKALATQV 115
Query: 71 ---------KEPVGDSSTLP-GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLI 119
+E D + GN LH SVP+SN+E+ N +VRT GD R K +HVD +
Sbjct: 116 ESLAKLAAEQEAERDRMVISVGNILHESVPLSNDEETGNVVVRTFGDVTRRMKMTHVDCM 175
Query: 120 TMIDGVD-SEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEV 178
+ +D S+ +AGGR + L+G V LQ L+ YAL+ I +GY P Y PFF+ KE
Sbjct: 176 ERLGLMDTSKTVTAMAGGRAFVLRGGLVQLQFALISYALNFLIARGYEPFYPPFFLNKES 235
Query: 179 MQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEAS 238
M VAQL+ FDE LYKV G G D+KYLIATSE PI A H + W E
Sbjct: 236 MGAVAQLSDFDESLYKVSGDG-------------DEKYLIATSEAPIAAYHTNKWFTEMK 282
Query: 239 LPIRYLGVSTCFRQE--------------------------------------------- 253
PI+Y GVS+CFR+E
Sbjct: 283 EPIKYAGVSSCFRKEAGAHGRDTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMIQTSQ 342
Query: 254 DLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVR 311
D +S+ YRV+NI SGALN+AAAKK DLEAWFPGSGAFRELVSCSNC DYQ+R + R
Sbjct: 343 DFNESLGLPYRVINICSGALNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARGVNCR 402
Query: 312 YGQTKK---MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVN 368
+G K N E+ HMLN T CA TR +C I E +QTE G+ IP+ LR F+ V
Sbjct: 403 FGPNTKGSTANNTKEYCHMLNGTLCAVTRTMCCICENYQTEEGIVIPEVLRPFMMGTEV- 461
Query: 369 EAGEIPFVKTAPIDEEE 385
+ F AP ++E
Sbjct: 462 ----LKFPAEAPAADKE 474
>gi|4458|emb|CAA28572.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 462
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 236/469 (50%), Gaps = 110/469 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F +KGG+PE +R++QK R +VE+VD++I + W + R + D NK N
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D+S L GN +HPSV
Sbjct: 61 KDIGLKFKNKE---DASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVV 117
Query: 91 VSNNEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSN+E+ N +VRT ++ SH +++ +DG D + G + G RG
Sbjct: 118 VSNDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YF + V L L+ Y L KGY PL P M KE+M + AQ ++FDEELYKVI
Sbjct: 178 YFFRNYGVFLNQALINYGLQFLAAKGYIPLQAPVMMNKELMSKTAQPSEFDEELYKVI-- 235
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+
Sbjct: 236 -----------DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 284
Query: 253 ---------------------------------------EDLTKS--IAYRVVNIVSGAL 271
E+ KS + YR+V IVSG L
Sbjct: 285 HGKDAWGVFRVHAFEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
AT R +C ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 405 LAATQRALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
>gi|320588821|gb|EFX01289.1| seryl-tRNA synthetase [Grosmannia clavigera kw1407]
Length = 493
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 189/474 (39%), Positives = 239/474 (50%), Gaps = 97/474 (20%)
Query: 5 LDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI 64
LDL E+GG+PE VR++Q+ RF VE+VD+VI+ R+ + A N N K I
Sbjct: 5 LDLI-VERGGNPEAVRESQRRRFAPVEVVDQVIDLWQDHRRTLYAATQLNAKINEIQKQI 63
Query: 65 GEKMKAKE-----------------PVGDSSTLP-----------GNHLHPSVPVSNNED 96
G K KAKE + DS+ GN +H SVPVS ED
Sbjct: 64 GAKKKAKENADELLQQKIAIEKEKKEILDSAAAKEKIMNKALATIGNIIHDSVPVSATED 123
Query: 97 ENGIVRT--KGDTEV-------RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+N +RT D EV SH +L+ IDG + EAG V G RGYFLK V
Sbjct: 124 DNPTLRTWVPADREVPIGQEDRSTLLSHHELLLRIDGYNPEAGVKVVGHRGYFLKNWGVF 183
Query: 148 LQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L ++ + L ++ GYT L +PF M KEVM + AQL FDE+LYK GDS
Sbjct: 184 LNQAIINFGLEFLTQQHGYTALQSPFMMSKEVMAQTAQLDDFDEQLYKACRLLVVDGDS- 242
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
+KYLIA SEQPI A H WL A +PI+Y G STCFR+E
Sbjct: 243 -------EKYLIA-SEQPISAYHAGQWLQPAEMPIKYAGFSTCFRREAGSHGKDAWGTFR 294
Query: 254 -------------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDL 281
D KS + YRV+ IVSGA N AA+KK DL
Sbjct: 295 VHQFEKVEQFVLCDPEKSWEMFDAMIANSEEFCQALGLPYRVIAIVSGAFNQAASKKFDL 354
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP ++ELVSCSNC D+QSR L +RYG + + K ++VH LN+T AT+R +CA
Sbjct: 355 EAWFPYQAEYKELVSCSNCTDFQSRALDIRYGAKTQTDAKKKYVHCLNSTLTATSRTMCA 414
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEG 395
ILE QT GVRIP+ LRK++P +PF K P D K + K +G
Sbjct: 415 ILENFQTPEGVRIPEPLRKYLPGA----PDFLPFTKELPKDSTSQKAKAKSDKG 464
>gi|302502039|ref|XP_003013011.1| hypothetical protein ARB_00894 [Arthroderma benhamiae CBS 112371]
gi|291176572|gb|EFE32371.1| hypothetical protein ARB_00894 [Arthroderma benhamiae CBS 112371]
Length = 480
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/478 (37%), Positives = 239/478 (50%), Gaps = 101/478 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ E+GGDP+KV+++Q+ RF + ELVD+V+ R+ R++A N
Sbjct: 1 MLDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSRINAVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP----------------------------GNHLHPSVPVSN 93
K IG K + KE D GN++ SVPV
Sbjct: 61 KEIGMKKRNKEDATDLLAEKAKLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPVDK 120
Query: 94 NEDENGIVRTKG--DTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N ++RT D +V K+ SH +++ +DG D E G + G RGY L G + L
Sbjct: 121 NEDNNAVLRTWAPPDVKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV Y L KGY P P FM + M + AQL QFDEELYKV +
Sbjct: 181 LALVNYGLEFLFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKV----------TESE 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+
Sbjct: 231 DPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 253 ---------------------------------EDLTKS--IAYRVVNIVSGALNHAAAK 277
E+ KS I Y+V+ IVSGALN+AA+K
Sbjct: 291 FEKVCIGAPKIEQFLITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASK 350
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
KLDLEAWFP G ++ELVSCSNC DYQ+R L +R+G K + K + H LNAT CAT R
Sbjct: 351 KLDLEAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATER 410
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEG 395
+C ILE +Q E G+ +P+ LRK++P +P+V+ P D T QK + +G
Sbjct: 411 ALCCILENYQQEDGIIVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVKAKG 461
>gi|326480121|gb|EGE04131.1| seryl-tRNA synthetase [Trichophyton equinum CBS 127.97]
Length = 435
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 226/440 (51%), Gaps = 87/440 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ E+GGDP+KV+++Q+ RF + ELVD+V+ R+ R++A N
Sbjct: 1 MLDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSKINAVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP----------------------------GNHLHPSVPVSN 93
K IG K + KE D GN++ SVPV
Sbjct: 61 KEIGMKKRNKEDASDLLAEKAKLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPVDK 120
Query: 94 NEDENGIVRTKG--DTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N ++RT D +V K+ SH +++ +DG D E G + G RGY L G + L
Sbjct: 121 NEDNNTVLRTWAPPDVKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV Y L KGY P P FM + M + AQL QFDEELYKV +
Sbjct: 181 LALVNYGLEFLFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKV----------TESE 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+
Sbjct: 231 DPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 253 --------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAW 284
E+ KS I Y+V+ IVSGALN+AA+KKLDLEAW
Sbjct: 291 FEKIEQFLITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAW 350
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +R+G K + K + H LNAT CAT R +C ILE
Sbjct: 351 FPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILE 410
Query: 345 THQTETGVRIPDCLRKFVPA 364
+Q E G+ +P+ LRK++P
Sbjct: 411 NYQQEDGIVVPEVLRKYIPG 430
>gi|452982680|gb|EME82439.1| hypothetical protein MYCFIDRAFT_165530 [Pseudocercospora fijiensis
CIRAD86]
Length = 491
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 176/465 (37%), Positives = 243/465 (52%), Gaps = 98/465 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFK-NLC 60
+LD++ F E+ GDP K++++Q+ R E+VD+VI + R+ + A K N
Sbjct: 1 MLDVNDFIKERNGDPTKIKESQRRRHAPEEVVDEVIAMFEEHRKTDYAARTEMGAKINAV 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSV 89
K +G+ K+K + L GN++H +V
Sbjct: 61 QKAMGQNKKSKGDPKEFEQLKQQKDDLAREQEAMKKQAEEIYAQLQKKVKSIGNYVHETV 120
Query: 90 PVSNNEDENGIVRT---KGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
PVS+NED N +RT +G T V KK SH +++T +DG D + G + G RG FL G
Sbjct: 121 PVSDNEDNNATIRTWAPEGVT-VEKKDCLSHHEVLTRLDGADWDRGVKIVGHRGNFLTGN 179
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
L+ L YA+ +KGYT P+FM ++ M + AQL QFDEELYKV K
Sbjct: 180 GYYLKRALETYAMDFLRKKGYTACQPPYFMLRDQMAKTAQLEQFDEELYKVTEK------ 233
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------- 254
E D DKYLIATSEQPI A+H D WL + LPIRY G+STCFR+E
Sbjct: 234 ---ENDPTSDKYLIATSEQPISAMHADEWLNNSELPIRYGGLSTCFRKEAGSHGKDAWGI 290
Query: 255 -----------------------------------LTKSIAYRVVNIVSGALNHAAAKKL 279
T I Y+VV IVSGALN+AA+KK
Sbjct: 291 FRVHQFEKVEQFVFCKPEDSWKHFDEMIGFSEEFYKTLKIPYQVVAIVSGALNNAASKKY 350
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE--KIEFVHMLNATACATTR 337
DLEAWFP G ++ELVSCSNC DYQ+R L +RYGQ K+ + K ++VH LN+T CA R
Sbjct: 351 DLEAWFPFQGEYKELVSCSNCTDYQTRELEIRYGQKKQTDPSYKKDYVHALNSTLCAVQR 410
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
+C ++E +Q E G+ +P+ LR+++P ++ +P+VK P D
Sbjct: 411 ALCCVMENYQREDGMEVPEVLRRYMP----DQEEFLPYVKELPKD 451
>gi|403375109|gb|EJY87525.1| Seryl-tRNA synthetase, cytoplasmic, putative [Oxytricha trifallax]
Length = 465
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 229/445 (51%), Gaps = 96/445 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M +D++L R + G DP VRK+++ RF++ LVD++IE D++WR+ + K N
Sbjct: 1 MPIDINLLREDAGNDPNVVRKSEEQRFRDPVLVDQIIEIDVQWRKLTFDLNKLKKEHNDF 60
Query: 61 SKVIGEKMK-------AKEPVGDSS------------------------TLPGNHLHPSV 89
SK IG+++K +E S+ L GN +H V
Sbjct: 61 SKEIGKRIKESKGQDKCEEEKAQSNLMKENVEKVEKELAECSLLRTQKLNLIGNIVHTDV 120
Query: 90 PVSNNEDENGIVRTKG-------DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLK 142
PVS +E+ N + G D + H +++ +D V+ E G +AG RGYFLK
Sbjct: 121 PVSKDENLNQVTSEWGQIPDLKVDGKTLGHLHHHEIMQCLDMVEFERGQKIAGHRGYFLK 180
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
G V L L+ Y +S + YTPL PFFM++ +MQE QL+ F+E LYKV G+
Sbjct: 181 GNGVLLNQALINYGVSFLSAQEYTPLQPPFFMKQSIMQETCQLSDFEENLYKVHGQSVD- 239
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---------- 252
+ YL+ATSEQPI A+HR+ W+ LPIRY G+S+CFR+
Sbjct: 240 ----------EPMYLVATSEQPISALHRNEWIEPQDLPIRYAGISSCFRKEAGAHGRDVW 289
Query: 253 --------------------------EDLTK---------SIAYRVVNIVSGALNHAAAK 277
E++ + + YRVVNIVSG LN AAAK
Sbjct: 290 GIFRVHQFEKVEQFCITTPEKSWEMHEEMIRIAETFYKNLELPYRVVNIVSGELNDAAAK 349
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLEAWFPG A+RELVS SNC DYQSR L VR N+ +VHMLNAT CAT R
Sbjct: 350 KYDLEAWFPGYEAYRELVSSSNCTDYQSRGLEVRLALKNNTNKV--YVHMLNATLCATER 407
Query: 338 VICAILETHQTETGVRIPDCLRKFV 362
+C ILE +QT GVR+P L+ F+
Sbjct: 408 TMCCILENYQTPEGVRVPAVLQPFM 432
>gi|385302569|gb|EIF46695.1| seryl-trna synthetase [Dekkera bruxellensis AWRI1499]
Length = 460
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 179/477 (37%), Positives = 236/477 (49%), Gaps = 106/477 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F EKGGD + ++++Q+ R +VE+VD++IE W + R D NK +N
Sbjct: 1 MLDILQFIDEKGGDSKAIKESQRRRGASVEIVDEIIEEYRNWTKVRFDLDELNKKQNKLQ 60
Query: 62 KVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVSN 93
K IG+K K KE + GN LHPSV S
Sbjct: 61 KEIGKKFKNKEDPKELLKQKDDVVAQKKELTKKEEEADKKLRYKVNQVGNILHPSVVDSL 120
Query: 94 NEDENGIVRT--------------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGY 139
+E N + RT T+ K SH +++ +D D E G + G RG+
Sbjct: 121 DEANNSLERTWEPEGYEFGKLTNVATGTKAPAKLSHHEILLRLDXYDPERGVKICGHRGF 180
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
FL+ V L L+ Y LS ++KGYTP+ P M K+VM + AQL++FDEELYKV
Sbjct: 181 FLRNYGVFLNQALINYGLSFLLKKGYTPMQAPVMMNKDVMAKTAQLSEFDEELYKVTD-- 238
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ----- 252
GD D+KYLIATSEQPI A H W P LP+RY G+S CFR+
Sbjct: 239 ---GD--------DEKYLIATSEQPISAYHSGEWFERPSEQLPVRYAGLSQCFRREAGAH 287
Query: 253 --------------------------------------EDLTKS--IAYRVVNIVSGALN 272
ED KS + YRVV IVSG LN
Sbjct: 288 GKDAWGIFRVHTFEKIEQFCLAEPDKSWEEFNRMIGISEDFYKSLKLPYRVVGIVSGELN 347
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G ++ ++VH LN+T
Sbjct: 348 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKTANQKEKKYVHCLNSTL 407
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
CAT R +C ILE +QT G+ IP+ LR ++P + IPFVK P + KK+
Sbjct: 408 CATERCLCCILENYQTPDGLMIPEVLRDYIPG----KPEFIPFVKELPKNSTSNKKK 460
>gi|218188461|gb|EEC70888.1| hypothetical protein OsI_02425 [Oryza sativa Indica Group]
gi|222618678|gb|EEE54810.1| hypothetical protein OsJ_02228 [Oryza sativa Japonica Group]
Length = 846
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 234/443 (52%), Gaps = 106/443 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFRTEKGGDPE +R++Q++R +VELVD+VI D +WRQ + + D + N S
Sbjct: 1 MLDINLFRTEKGGDPELIRRSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTS 60
Query: 62 KVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSVP 90
K IG K+KAK+ D+S L GN +H SVP
Sbjct: 61 KEIG-KLKAKKE--DASALIQSTEEIKKRLAAKETEVQEAKGTLDAKLVTIGNIVHESVP 117
Query: 91 VSNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
VS++E N IVRT G+ + +HVDL M+D V E GA VAGGRGY+LK V L
Sbjct: 118 VSDDEANNLIVRTWGERRLEGNLKNHVDLCKMLDIVALEKGADVAGGRGYYLKDEGVLLN 177
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L+ + L+ ++G+ P+ TPFFMRKE M + AQLAQFDEELYK I ++ G+
Sbjct: 178 LALINFGLAFLRKRGFKPMQTPFFMRKETMGKCAQLAQFDEELYKAIIIVKQSGN----- 232
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D LI C +RY G STCFR+E
Sbjct: 233 ---DTFSLIK------CNFS----------GMRYAGYSTCFRKEAGSHGRDTAGIFRVHQ 273
Query: 254 -----------------------------DLTKSIA--YRVVNIVSGALNHAAAKKLDLE 282
D K I Y++V+IVSGALN AAAKK DLE
Sbjct: 274 FEKIEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLE 333
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
AWFP S +RELVSCSNC D+Q+RRL + YGQ K + +FVHMLN+T AT R +C I
Sbjct: 334 AWFPASKTYRELVSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCI 393
Query: 343 LETHQTETGVRIPDCLRKFVPAV 365
LE Q E GV +P L+ ++ +
Sbjct: 394 LENFQKENGVEVPKALQPYMGGI 416
>gi|71755749|ref|XP_828789.1| seryl-tRNA synthetase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834175|gb|EAN79677.1| seryl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261334698|emb|CBH17692.1| seryl-tRNA synthetase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 479
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 158/337 (46%), Positives = 196/337 (58%), Gaps = 67/337 (19%)
Query: 82 GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLITMIDGVD-SEAGAIVAGGRGY 139
GN LH SVP++ +E+ N +VRT G+T R K +HV ++ + +D S+A +AGGR Y
Sbjct: 137 GNILHESVPIAQDEETGNTVVRTFGNTTKRAKLNHVSIMERLGMMDTSKAVTSMAGGRSY 196
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
LKG V LQV LV Y+L +++GYTP Y PFF+ ++VM EVAQL+QFDEELY+V G G
Sbjct: 197 VLKGGLVQLQVALVSYSLDFLVKRGYTPFYPPFFLNRDVMGEVAQLSQFDEELYQVSGDG 256
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------- 252
+K KYLIATSE PI A HR W E P++Y G+STCFR+
Sbjct: 257 DK-------------KYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGR 303
Query: 253 --------------------------------------EDLTKSIA--YRVVNIVSGALN 272
E+ KS+ YRVVNI SGALN
Sbjct: 304 DTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSGALN 363
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ----TKKMNEKIEFVHML 328
+AAAKK DLEAWFP SGAFRELVSCSNC DYQS+ + RYG T N K E+ HML
Sbjct: 364 NAAAKKYDLEAWFPASGAFRELVSCSNCTDYQSQSVNCRYGPNLRGTAAQNVK-EYCHML 422
Query: 329 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 365
N T CA TR +C I E +QTE GV IPD LR ++ +
Sbjct: 423 NGTLCAITRTMCCICENYQTEEGVVIPDVLRPYMMGI 459
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+ LFR E G + +R++Q+ RF + ++VD +IE D KWR+ + + K N+C
Sbjct: 1 MVLDIQLFRDETGANI--IRESQRRRFADPDIVDAIIEADKKWRRTQFLTEASKKLINIC 58
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK +G K KAKE GD+S +P
Sbjct: 59 SKAVGAKKKAKEADGDTSEIP 79
>gi|290560564|pdb|3LSQ|A Chain A, Trypanosoma Brucei Seryl-Trna Synthetase
gi|290560565|pdb|3LSQ|B Chain B, Trypanosoma Brucei Seryl-Trna Synthetase
gi|290560566|pdb|3LSS|A Chain A, Trypanosoma Brucei Seryl-Trna Synthetase In Complex With
Atp
gi|290560567|pdb|3LSS|B Chain B, Trypanosoma Brucei Seryl-Trna Synthetase In Complex With
Atp
Length = 484
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 158/337 (46%), Positives = 196/337 (58%), Gaps = 67/337 (19%)
Query: 82 GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLITMIDGVD-SEAGAIVAGGRGY 139
GN LH SVP++ +E+ N +VRT G+T R K +HV ++ + +D S+A +AGGR Y
Sbjct: 142 GNILHESVPIAQDEETGNTVVRTFGNTTKRAKLNHVSIMERLGMMDTSKAVTSMAGGRSY 201
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
LKG V LQV LV Y+L +++GYTP Y PFF+ ++VM EVAQL+QFDEELY+V G G
Sbjct: 202 VLKGGLVQLQVALVSYSLDFLVKRGYTPFYPPFFLNRDVMGEVAQLSQFDEELYQVSGDG 261
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------- 252
+K KYLIATSE PI A HR W E P++Y G+STCFR+
Sbjct: 262 DK-------------KYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGR 308
Query: 253 --------------------------------------EDLTKSIA--YRVVNIVSGALN 272
E+ KS+ YRVVNI SGALN
Sbjct: 309 DTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSGALN 368
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ----TKKMNEKIEFVHML 328
+AAAKK DLEAWFP SGAFRELVSCSNC DYQS+ + RYG T N K E+ HML
Sbjct: 369 NAAAKKYDLEAWFPASGAFRELVSCSNCTDYQSQSVNCRYGPNLRGTAAQNVK-EYCHML 427
Query: 329 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 365
N T CA TR +C I E +QTE GV IPD LR ++ +
Sbjct: 428 NGTLCAITRTMCCICENYQTEEGVVIPDVLRPYMMGI 464
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+ LFR E G + +R++Q+ RF + ++VD +IE D KWR+ + + K N+C
Sbjct: 6 MVLDIQLFRDETGANI--IRESQRRRFADPDIVDAIIEADKKWRRTQFLTEASKKLINIC 63
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK +G K KAKE GD+S +P
Sbjct: 64 SKAVGAKKKAKEADGDTSEIP 84
>gi|323454091|gb|EGB09961.1| hypothetical protein AURANDRAFT_23294, partial [Aureococcus
anophagefferens]
Length = 440
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/454 (38%), Positives = 228/454 (50%), Gaps = 93/454 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ + R +GGDPEKVR++Q+ RF +V LVDKVI D WR+ D+ KN
Sbjct: 1 MPLDISILRAYRGGDPEKVRESQRRRFADVGLVDKVIAEDEAWRKLTQDVDDIKAEKNKK 60
Query: 61 SKVIGEKMKAKEPV-----GDSSTLP------------------------GNHLHPSVPV 91
K I KAK V D L GN + V V
Sbjct: 61 QKEITTLKKAKADVPAQMLADLKALDAKRAAVEARVEPQAQKVKKLFSGIGNLVADDVVV 120
Query: 92 SNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
S +E+ +N +V G+ +SH +L+ MI G + E G VAG R YF V L
Sbjct: 121 SQDEEKDNEVVSRWGECAPTAAHSHHELLYMIGGYEPERGVRVAGHRAYFFTDVGVMLNQ 180
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ Y +S ++ Y + P+ M K+VM VAQL++FDE LYKV G GD+ E
Sbjct: 181 AVINYGISFLRKRAYKVMQPPYMMNKDVMAGVAQLSEFDEALYKVSG-----GDADSE-- 233
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
KYLIATSEQPICA H+ WL EA LP+RY G+STCFR+E
Sbjct: 234 ----KYLIATSEQPICAYHKGEWLKEADLPLRYAGISTCFRKEAGSHGRDTWGIFRVHQF 289
Query: 254 -----------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDLEA 283
DL +S Y VVNIVSG LN+AA KK DLEA
Sbjct: 290 EKVEQFCITVGDLEESAKMHEEMKDLAEEYVQSLGFPYHVVNIVSGELNNAAIKKYDLEA 349
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFP FRELVSCSNC DYQSR + +R G K + ++VHMLN+T A R IC +L
Sbjct: 350 WFPFQKQFRELVSCSNCTDYQSRAMEIRCGNKKMGEREKKYVHMLNSTLAACGRTICCLL 409
Query: 344 ETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
E +QT TGV +P+ L ++ + +PFV+
Sbjct: 410 ENNQTPTGVHVPEVLWPYMDGLTF-----LPFVR 438
>gi|340058897|emb|CCC53268.1| putative seryl-tRNA synthetase [Trypanosoma vivax Y486]
Length = 475
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/350 (46%), Positives = 200/350 (57%), Gaps = 73/350 (20%)
Query: 82 GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLITMIDGVDS-EAGAIVAGGRGY 139
GN LH SVP + +ED N +VRT GDT R K +HV ++ + +DS +A +AG R Y
Sbjct: 137 GNILHESVPTAADEDTGNIVVRTFGDTTKRAKLNHVSIMERLGMMDSTKAVTSIAGARAY 196
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
LKG V LQV L+ YAL+ +++GYTP Y PFF+ KEVM EVAQL+QFDEELYKV G
Sbjct: 197 VLKGGLVQLQVALISYALNFLVQRGYTPFYPPFFLNKEVMGEVAQLSQFDEELYKVSGDC 256
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------- 252
E DKYLIATSE PI A HR W E + P++Y G+S+CFR+
Sbjct: 257 E-------------DKYLIATSEMPIAAYHRGRWFTELAEPLKYAGLSSCFRKEAGAHGR 303
Query: 253 --------------------------------------EDLTKSIA--YRVVNIVSGALN 272
E+ KS+ YRV+NI SGALN
Sbjct: 304 DTLGIFRVHQFDKLEQFIVCSPREEESWRHLEEMISTSEEFYKSLGLPYRVINICSGALN 363
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK----MNEKIEFVHML 328
AAAKK DLEAWFP SG FRELVSCSNC DYQ+R + R+G + N K E+ HML
Sbjct: 364 DAAAKKYDLEAWFPASGTFRELVSCSNCTDYQARSVNCRFGPNLRGVAAQNVK-EYCHML 422
Query: 329 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAV----YVNEAGEIP 374
N T CA TR +C I E +QTE GV IPD LR ++ + YV AG++P
Sbjct: 423 NGTLCAVTRTMCCICENYQTEAGVVIPDVLRPYMMGLDMLKYV--AGDVP 470
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ LFR E+G + VR++Q+ RF ++ LVD VI+ D +WR+ + ++ K N C
Sbjct: 1 MGLDIQLFRDEQGANI--VRESQRRRFADISLVDAVIDVDKRWRRTQFLSEVSKKLINDC 58
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK +G K KAKE GD+S +P
Sbjct: 59 SKAVGAKKKAKEADGDTSDVP 79
>gi|296817321|ref|XP_002848997.1| seryl-tRNA synthetase [Arthroderma otae CBS 113480]
gi|238839450|gb|EEQ29112.1| seryl-tRNA synthetase [Arthroderma otae CBS 113480]
Length = 468
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 179/473 (37%), Positives = 242/473 (51%), Gaps = 99/473 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D+ E+GGDP+KV+++Q+ RF + ELVD+V+ R+ R++A N
Sbjct: 1 MIDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSKINAVQ 60
Query: 62 KVIGEKMKAKEPVGD----SSTLP------------------------GNHLHPSVPVSN 93
K IG K + KE D +TL GN++ SVP+ N
Sbjct: 61 KEIGMKKRNKEDASDLLQQKATLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPIDN 120
Query: 94 NEDENGIVRTKG--DTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N +VRT DT+V K+ SH +++ +DG D E G + G RGY L G + L
Sbjct: 121 NEDNNVVVRTWAPPDTKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV Y L KGY P P FM + M + AQL QFDEELYKV +
Sbjct: 181 LALVNYGLEFLFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKV----------TESE 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D DKYLIATSEQP+ A+H W+ E LPI +TC+R+E
Sbjct: 231 DPSTDKYLIATSEQPLSALHDGEWILEKELPI-----NTCYRKEAGAHGKDAWGIFRVHQ 285
Query: 254 ---------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAW 284
+ KS I Y+V+ IVSGALN+AA+KKLDLEAW
Sbjct: 286 FEKIEQFLITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAW 345
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +R+G K + K + H LNAT CAT R +C ILE
Sbjct: 346 FPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILE 405
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMK 397
+Q E G+ +P+ LRK++P +P+V+ P D T QK + +G K
Sbjct: 406 NYQQEDGIVVPEALRKYIPG----NPEFLPYVRELPKD---TTSQKVKAKGGK 451
>gi|378731062|gb|EHY57521.1| seryl-tRNA synthetase [Exophiala dermatitidis NIH/UT8656]
Length = 487
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/460 (37%), Positives = 237/460 (51%), Gaps = 92/460 (20%)
Query: 12 KGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAK 71
+GGDP+KV ++ + R+ E+VD+VI Q R+KA F N K IG+ KAK
Sbjct: 11 RGGDPKKVIESLQKRYAPTEIVDEVIALWNDAYQTRYKATQFGAKINAVQKEIGKLKKAK 70
Query: 72 EPVG-----------------DSST-----------LPGNHLHPSVPVSNNEDENGIVRT 103
+ D +T L GN++H SVPV++NED N +++
Sbjct: 71 QDADHLLKEKAELEKQKKATEDEATEKEKLRDKKCKLIGNYVHESVPVNDNEDFNEVIKR 130
Query: 104 KG----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSK 159
E R SH +++T D D E G + G RGYFL+ V L L+ Y L
Sbjct: 131 WAPEGVKVEKRDCLSHHEVMTRADVYDGERGVKLVGHRGYFLRKWGVLLNQALINYGLHF 190
Query: 160 WIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIA 219
+ +GY P+ P+FM+ E M + AQL QFDEELYKV+ E + +DKYLIA
Sbjct: 191 LVGRGYDPIQPPYFMKAEYMAKTAQLEQFDEELYKVV-----------EGADAEDKYLIA 239
Query: 220 TSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ--------------------------- 252
TSEQP+ A+ D WL E LP+++ G S+CFR+
Sbjct: 240 TSEQPLSAMFADEWLTEKDLPMKFAGYSSCFRKEAGSHGRDAWGLFRIHQFEKIEQFLFV 299
Query: 253 ---------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFREL 294
ED+ ++ + YRVV IVSGALN+AAAKK DLEAWFP G ++EL
Sbjct: 300 KPEESWQALEDMRETAEAFYQSLGLPYRVVVIVSGALNNAAAKKYDLEAWFPYQGEYKEL 359
Query: 295 VSCSNCLDYQSRRLLVRYGQTK-KMNEKIEFVHMLNATACATTRVICAILETHQTETGVR 353
VSCSNC DYQ+R L +RYGQ K ++ + +VH LN T CAT R +C +LE +Q E G
Sbjct: 360 VSCSNCTDYQTRELEIRYGQKKGAIDARKSYVHALNGTLCATERTLCCLLENYQKEDGFE 419
Query: 354 IPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQK 393
+P+ LR ++P IP+ K P + K +++ K
Sbjct: 420 VPEALRPYMPP---GTPDIIPYTKELPKESTSVKAKQQPK 456
>gi|358053986|dbj|GAA99881.1| hypothetical protein E5Q_06584 [Mixia osmundae IAM 14324]
Length = 479
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 234/446 (52%), Gaps = 92/446 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M +D+ ++GGDPE VR++Q RF +VELV++V +W + ++ + N
Sbjct: 1 MGIDVQSLNPDRGGDPEAVRQSQAKRFDSVELVEEVAALYKQWVKISYEISQIRQQVNAL 60
Query: 61 SKVIGEKMKAKEPVGD----SSTLP------------------------GNHLHPSVPVS 92
K IG K + KE D S L GN +HPSVPVS
Sbjct: 61 QKDIGLKKRNKENADDLLKQKSELDAKIEGLKTSETEADLVCKAQCAKIGNIVHPSVPVS 120
Query: 93 NNEDENGIVRT-------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
+ED+N +V+T ++ SH +++ ++ D++ G VAG RG+FL G
Sbjct: 121 QSEDDNVVVKTYHPDGPNATPSQSADMLSHHEVMYRLEMTDADRGIKVAGHRGFFLTGDG 180
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
V L L+ Y LS E+ Y + PFFM++ +M + AQL++FDE LYK+ G
Sbjct: 181 VDLNQALISYGLSFLRERKYKRIQPPFFMKRTMMAKTAQLSEFDESLYKIEGNA------ 234
Query: 206 APEKDEL--DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ--------- 252
+ DEL DDKYLIATSEQPI A+H D W P+ LPIRY G STCFR+
Sbjct: 235 --DDDELQEDDKYLIATSEQPISALHADEWFESPKEQLPIRYAGYSTCFRKEAGSGGRDT 292
Query: 253 ----------------------------------EDLTKS--IAYRVVNIVSGALNHAAA 276
ED +S + Y+++ IVSGALN+AAA
Sbjct: 293 WGIFRVHQFEKIEQFCITEPEHSWEMFDSMIQHSEDFYQSLKLPYQLIAIVSGALNNAAA 352
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
KK DLEAWFP GA++ELVS SNC DYQSR L VR G K+ + ++VHMLN T CAT
Sbjct: 353 KKYDLEAWFPNQGAYKELVSVSNCTDYQSRALEVRCGLKKQGDTIKKYVHMLNGTLCATE 412
Query: 337 RVICAILETHQTETGVRIPDCLRKFV 362
R +C I+E +QT GV IP+ L+ ++
Sbjct: 413 RALCCIVENYQTPEGVNIPEVLQPYM 438
>gi|296415556|ref|XP_002837452.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633324|emb|CAZ81643.1| unnamed protein product [Tuber melanosporum]
Length = 444
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/469 (39%), Positives = 235/469 (50%), Gaps = 108/469 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F +GG+PE +R+ Q+ R+ VE VD+VI + R R DN + N
Sbjct: 1 MLDVLSFIEARGGNPEVIREAQRRRYAPVEAVDEVIALYEEGRVARFNVDNKGREINTTQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K KAKE D+S L GN +H SVP
Sbjct: 61 KEIGAKKKAKE---DASLLLQQKVKFEAEKKDLEVIAKEKEKQLYAKLGTIGNIVHNSVP 117
Query: 91 VSNNEDENGIVR--TKGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
VSNNED N ++R T V K SH D++ +DG ++E G V G RGYFLK V
Sbjct: 118 VSNNEDSNELIRSWTPDGVNVEKHDCLSHHDVLARLDGYEAERGVKVVGHRGYFLKQWGV 177
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ Y L KGYTPL TP FM K++M + AQL QFD+ELYKV+ EK
Sbjct: 178 FLNQALINYGLEFLASKGYTPLQTPQFMLKDMMAKTAQLEQFDDELYKVVDGEEK----- 232
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
+DKYLIATSEQPI A+H D WL + LPIRY G S+C+R+E
Sbjct: 233 ------NDKYLIATSEQPISALHADEWLQQKELPIRYAGFSSCYRREAGAHGKDAWGIFR 286
Query: 254 -------------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDL 281
D KS I YRVV IVSGALN+AAAKK DL
Sbjct: 287 VHQFEKIEQFVITDPEKSWEAFDEMINYSEEFYKSLNIPYRVVTIVSGALNNAAAKKYDL 346
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP G ++EL SR L +RYG + + ++VH LN+T CAT R +C
Sbjct: 347 EAWFPFQGEYKEL----------SRNLEIRYGTKAQTDTVKKYVHCLNSTLCATERSLCC 396
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
ILE +QT G+ +P+ LRK++P V IPF K + ++ K
Sbjct: 397 ILENYQTPEGINVPEALRKYIPGAPVF----IPFSKELATNSTSMRRGK 441
>gi|346979592|gb|EGY23044.1| seryl-tRNA synthetase [Verticillium dahliae VdLs.17]
Length = 446
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 175/459 (38%), Positives = 239/459 (52%), Gaps = 96/459 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD F E+GGDPEK+R++Q+ R VELVD+VI + R ++K FN
Sbjct: 1 MLDALDFIAERGGDPEKIRESQRQRGDPVELVDEVIALWQEARSEQYKVTQFNAQIGAVQ 60
Query: 62 KVIGEKMKAK----------------------------EPVGDSSTLPGNHLHPSVPVSN 93
K IG++ K K + + + + + GN++H SVP+SN
Sbjct: 61 KEIGQRRKNKVDDADLQVKKTDLQKQQKDQEAAAAEKQKELRNKTRIIGNYVHESVPISN 120
Query: 94 NEDENGIVRT-KGDTEVRKKY----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
ED+N ++RT K + K + SH D++ + G D G + G RGY L G L
Sbjct: 121 TEDDNKVIRTWKPEGRELKPFAAAVSHHDVLLKLGGYDPTRGVKLVGHRGYCLTGMGYFL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
LV Y + KGYTP P+F+ ++ M + AQL+QFDEELY+V +G+ SA
Sbjct: 181 NQALVSYGIEFLFNKGYTPNQPPYFLDRDQMAKTAQLSQFDEELYRV-SEGKSTDGSA-- 237
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---------------- 252
DKYLIATSEQP+ +H D WL LPI+Y G STCFR+
Sbjct: 238 -----DKYLIATSEQPLSCLHADEWLQPGQLPIKYAGFSTCFRKEAGNHGRDAWGVFRVH 292
Query: 253 ---------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEA 283
E+ KS+ Y+VV+IVSGALN++AAKK DLEA
Sbjct: 293 QFEKVEQFVLCKPEDSWKFFDEMIATSEEFYKSLGLPYQVVSIVSGALNNSAAKKFDLEA 352
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-----KIEFVHMLNATACATTRV 338
+FP G ++ELVSCSNC DYQ+R L +RYG KK E K E+VH LNAT A R
Sbjct: 353 YFPFQGEYKELVSCSNCTDYQTRELEIRYG-VKKAKEAPGSGKKEYVHALNATLTAAERT 411
Query: 339 ICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
+C +LE +QT G+ +P+ LRK++P + IPF K
Sbjct: 412 LCCVLENYQTAEGLNVPEVLRKYIPG----QPEFIPFQK 446
>gi|407041601|gb|EKE40844.1| serine--tRNA ligase [Entamoeba nuttalli P19]
Length = 453
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 184/472 (38%), Positives = 242/472 (51%), Gaps = 100/472 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD++LFR + P+ +R++QK R +VE+VD+++ D +W++ D K
Sbjct: 1 MGLDINLFRNQ----PDVIRESQKKRGASVEIVDEILALDNEWKKEGFTLDQTRKELGKI 56
Query: 61 SKVIGEKMKAKEPVGDSSTLP----------------------------------GNHLH 86
K +G K KE L GN +
Sbjct: 57 QKELGMLHKNKENPPTKEVLAEYDVKKKACESKIAELEKSVSELKVKIDSKIKSVGNIVP 116
Query: 87 PSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
SVPV +E N I T G+ K Y H +LI MI G D+E VAG RGY+LKG
Sbjct: 117 DSVPVEMDEKFNKIEVTYGEC-TPKLYHHHELIHMIGGADTERAVKVAGHRGYYLKGWGF 175
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ Y + ++G+TP+ TP+FMR+E+M + AQL+ FDE LY V G G+ V
Sbjct: 176 KLNQALINYGTNFLEQRGFTPIQTPYFMRRELMAKTAQLSDFDETLYHV-GTGKDV---- 230
Query: 207 PEKDELDD-KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
ELDD KYLIATSEQP+ A+H W+ LPIRY+G ST FR+E
Sbjct: 231 ----ELDDQKYLIATSEQPLTALHAGEWILPKQLPIRYMGFSTNFRKEAGAHGKDTWGIF 286
Query: 254 -------------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLD 280
D +S I YRVVNIVSGALN+AAAKK D
Sbjct: 287 RVHQFEKIEQFCMTLPDKSWEMHEEMIKNSRDFFESLKIPYRVVNIVSGALNNAAAKKYD 346
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
LE +FPG +RELVSCSNC DYQSR L VR QT K ++ +VHMLN+T CAT R +C
Sbjct: 347 LEGYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTDKKDKTKSYVHMLNSTLCATERALC 405
Query: 341 AILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
ILE +Q E G+ +P+ LR +V V +IPF+ P+ +E KK K+
Sbjct: 406 CILENYQCEDGIIVPEVLRPYVGGV-----EKIPFIAPKPVWAKEEKKSTKK 452
>gi|390605088|gb|EIN14479.1| seryl-tRNA synthetase [Punctularia strigosozonata HHB-11173 SS5]
Length = 451
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 177/462 (38%), Positives = 235/462 (50%), Gaps = 101/462 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F +KGG+ +++R +Q+ R +VELVD+VI +W + + + NK N
Sbjct: 1 MTLDVLHFIDKKGGNSQEIRDSQQKRGLSVELVDEVIAMYEEWVRMDFETNVLNKQINAI 60
Query: 61 SKVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVS 92
K IG+K KAKE + ++ GN + SVP+S
Sbjct: 61 QKEIGQKKKAKENADELVAKKKDLDAQVEAHKKATKEYEATMRQKASTVGNIVGKSVPIS 120
Query: 93 NNEDENGIVRT------KGDTEVRKK-YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
ED+N +RT E RK H +++ +D +D + G+ +AG RGYFL
Sbjct: 121 LTEDDNVTLRTWHPQGPNAQVEQRKDIMPHHEVLLRLDAMDLDRGSKIAGHRGYFLTNDG 180
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
+ L L+ Y L +KGY + PFFM K+ M + AQL QFDEELYKVIG+
Sbjct: 181 IDLNQALIAYGLDFLRKKGYKKIQPPFFMNKDQMAKTAQLDQFDEELYKVIGE------- 233
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE------DL-- 255
D+KYLIATSEQPI A H D W PE LPI+Y G STCFR+E D+
Sbjct: 234 -------DEKYLIATSEQPISAFHSDEWFESPEKQLPIQYAGYSTCFRKEAGSAGRDMWG 286
Query: 256 -------------------------------------TKSIAYRVVNIVSGALNHAAAKK 278
+ I YRVV IVSGALN AA++K
Sbjct: 287 IFRVHQFEKVEQFCITEPEKSWEMFDTMIANSEAFYQSLGIPYRVVAIVSGALNLAASQK 346
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLEAWFP GA++ELVSCSNC DYQ+RRL VR G K + +VHMLN T CAT R
Sbjct: 347 FDLEAWFPFQGAYKELVSCSNCTDYQARRLEVRCGLKAKDQTRKVYVHMLNGTLCATERA 406
Query: 339 ICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+C ++E +QT G+ IP+ LR Y+ +P+VK P
Sbjct: 407 LCCLVENYQTPEGLVIPEPLRP-----YMQGREFLPWVKELP 443
>gi|342185850|emb|CCC95335.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 473
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 171/408 (41%), Positives = 221/408 (54%), Gaps = 77/408 (18%)
Query: 14 GDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEP 73
GD +V + K+ ++N L + +E L Q + + K+L +V G +A++
Sbjct: 73 GDTAEVPPHVKEAYQNGTLSTEQMEK-LCVLQLKQLS------KDLSEQVAGLAKEAEQL 125
Query: 74 VGDSSTLP---GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLITMIDGVD-SE 128
+ + L GN LH SVP + +ED N +VRT GDT R K +HV ++ + +D S+
Sbjct: 126 EAERNKLMLTVGNILHESVPTAQDEDTGNVVVRTFGDTTKRAKLNHVSIMERLGMMDTSK 185
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
+AG R Y LKG V LQ+ L+ Y+L I +GYTP Y PFF+ K+ M EVAQL+QF
Sbjct: 186 FVTSMAGARSYVLKGGLVQLQMALMSYSLDFLIRRGYTPFYPPFFLNKDAMSEVAQLSQF 245
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
DEELY+V G G D KYLIATSE P+ A HR W E PI+Y G+S+
Sbjct: 246 DEELYQVTGDG-------------DSKYLIATSEMPMVAYHRGKWFTELKEPIKYAGMSS 292
Query: 249 CFRQ---------------------------------------------EDLTKSIA--Y 261
CFR+ ED +KS+ Y
Sbjct: 293 CFRKEAGAHGRDTLGIFRVHQFDKIEQFVVCSPRDGESWRVLEDMISTSEDFSKSLGLPY 352
Query: 262 RVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ----TKK 317
RV+NI SGALN+AAAKK DLEAWFP SGAFRELVSCSNC DYQ+ + RYG T
Sbjct: 353 RVINICSGALNNAAAKKYDLEAWFPASGAFRELVSCSNCTDYQAHSINCRYGPNLRGTVS 412
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 365
N K E+ HMLN T CA TR +C I E +QTE GV IPD LR ++ V
Sbjct: 413 QNVK-EYCHMLNGTLCAVTRTMCCICENYQTEEGVVIPDVLRPYMMGV 459
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+ LFR EKG + +R++++ RF + +VD VIE D+KWR+ + + K N C
Sbjct: 1 MVLDIQLFRDEKGANI--IRESERRRFADPAVVDAVIETDMKWRRTQFLTEASKKLINSC 58
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK +G K KAKE GD++ +P
Sbjct: 59 SKAVGAKKKAKEADGDTAEVP 79
>gi|342881261|gb|EGU82179.1| hypothetical protein FOXB_07310 [Fusarium oxysporum Fo5176]
Length = 477
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 236/468 (50%), Gaps = 105/468 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFR--------HKADNF 53
+LD++ F E+GG+PEK+R++Q+ R VELVD+VI W+ R +
Sbjct: 1 MLDIEDFIEERGGNPEKIRESQRRRHAPVELVDEVI---ALWQDARKTNILEAQYGVTQI 57
Query: 54 NKFKNLCSKVIGEKMKAKEPVGD----------------------------SSTLPGNHL 85
N K IG K +AKE + + L GN++
Sbjct: 58 GTQINGVQKEIGLKKRAKEDATELLKQKEELTEKKKIQEELAAAKNAELKVKAKLVGNYV 117
Query: 86 HPSVPVSNNEDENGIVRT----KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
H SV VS+NED N I RT D + SH D++ + G D G + G RGY L
Sbjct: 118 HDSVHVSDNEDNNTIERTWEPETFDKTKQAALSHHDVLLRLGGYDPVRGVKLVGHRGYCL 177
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
G + L + LV YA + KGYTP PF + ++ M + AQL+QFDEELY+V
Sbjct: 178 TGYGMFLNLALVNYATAFLFNKGYTPNQPPFMLNRDQMAKTAQLSQFDEELYRV------ 231
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
P E D+YLIATSEQP+ A+H + W+ + LPI+Y G STCFR+E
Sbjct: 232 --SEGPTPSE-SDRYLIATSEQPLSALHAEEWIQPSELPIKYCGYSTCFRKEAGSHGRDA 288
Query: 254 -----------------------------------DLTKSIA--YRVVNIVSGALNHAAA 276
+ KS+ Y+VV IV+GALN+AAA
Sbjct: 289 WGVFRVHQFEKVEQFVLCGPDDSWDQFDQMMANSEEFYKSLGLPYQVVGIVTGALNNAAA 348
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMN----EKIEFVHMLNATA 332
KK DLEAWFP ++ELVSCSNC DYQ+R L +R+G K K E+VH LNAT
Sbjct: 349 KKYDLEAWFPFQKEYKELVSCSNCTDYQTRELEIRHGSKKGKQIVGGGKKEYVHALNATL 408
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
CAT R +C ILE +QTE G+ +P+ LRK++P E +PF+K P
Sbjct: 409 CATERTLCCILENYQTEEGLVVPEVLRKYIPG----EPEFLPFIKETP 452
>gi|392560214|gb|EIW53397.1| serine-tRNA ligase [Trametes versicolor FP-101664 SS1]
Length = 449
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 226/441 (51%), Gaps = 92/441 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F KGG+ E++R++Q+ R +VELVD++I+ W + +A+N K N
Sbjct: 1 MTLDVLHFIDNKGGNAEEIRESQRKRGLSVELVDEIIQMYTDWVKLDFEANNLAKTVNGV 60
Query: 61 SKVIGEKMKAKEP---------------------------VGDSSTLPGNHLHPSVPVSN 93
K I K KA+ + ++ GN + +VPVS
Sbjct: 61 QKEIAAKKKAQNADELVAKKKDIDAQVAAKRTESKELEAKMRQRASTVGNIVGKNVPVSL 120
Query: 94 NEDENGIVRT--KGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
ED+N ++T +V KK H +++ +D +D E GA +AG RGYFL + L
Sbjct: 121 TEDDNATLKTWHPEGKDVEKKSDIMPHHEVLMRLDAIDMERGAKIAGHRGYFLTNDGIDL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
L+ Y L ++GY + PF M KEVM + AQL QFDEELYKVI
Sbjct: 181 NQALISYGLDFLRKQGYKKVQPPFMMNKEVMAKTAQLDQFDEELYKVIAAD--------- 231
Query: 209 KDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE------DL----- 255
D+KYLIATSEQPI A H D W PE LP++Y G STCFR+E D+
Sbjct: 232 ----DEKYLIATSEQPISAFHSDEWFDSPETQLPVKYAGYSTCFRKEAGSAGRDMWGIFR 287
Query: 256 ----------------------------------TKSIAYRVVNIVSGALNHAAAKKLDL 281
+ I YRVV IVSGALN AAA+K DL
Sbjct: 288 VHQFEKVEQFCITEPEKSWEMLDAMVANSEAFYQSLKIPYRVVAIVSGALNLAAAQKYDL 347
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAWFP GA++ELVSCSNC DYQSRRL VR G K + +VHMLN T CAT R +C
Sbjct: 348 EAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKAKDQARKLYVHMLNGTLCATERALCC 407
Query: 342 ILETHQTETGVRIPDCLRKFV 362
++E +QT G+ IP+ LR ++
Sbjct: 408 LVENYQTPEGLVIPEVLRPYM 428
>gi|167392442|ref|XP_001740156.1| seryl-tRNA synthetase [Entamoeba dispar SAW760]
gi|165895834|gb|EDR23423.1| seryl-tRNA synthetase, putative [Entamoeba dispar SAW760]
Length = 453
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 182/472 (38%), Positives = 243/472 (51%), Gaps = 100/472 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD++LFR + P+ +R++QK R VE+VD+++ D +W++ D K
Sbjct: 1 MGLDINLFRNQ----PDVIRESQKKRGAPVEIVDEILSLDNEWKKEGFTLDQTRKELGKI 56
Query: 61 SKVIGEKMKAKE----------------------------------PVGDSSTLPGNHLH 86
K +G K KE + D GN +
Sbjct: 57 QKELGMLHKNKENPPTKEILAEYDIKKKACETKITELEKSVVELKVKINDKIKSVGNIVP 116
Query: 87 PSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
SVPV +E N + T G+ K Y H +LI MI G D+E VAG RGY+LKG
Sbjct: 117 DSVPVEMDEKFNKVEVTYGEC-TPKVYHHHELIHMIGGADTERAVKVAGHRGYYLKGWGF 175
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ Y+ + ++G+TP+ TP+FMR+E+M + AQL+ FDE LY V G G+ V
Sbjct: 176 KLNQALINYSTNFLEQRGFTPIQTPYFMRRELMAKTAQLSDFDETLYHV-GTGKDV---- 230
Query: 207 PEKDELDD-KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
ELDD KYLIATSEQP+ A+H W+ LPI+Y+G ST FR+E
Sbjct: 231 ----ELDDQKYLIATSEQPLTALHAGEWILPKQLPIKYMGFSTNFRKEAGAHGKDTWGIF 286
Query: 254 -------------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLD 280
D +S I YRVVNIVSGALN+AAAKK D
Sbjct: 287 RVHQFEKIEQFCMTLPDKSWEMHEEMIKNARDFFESLKIPYRVVNIVSGALNNAAAKKYD 346
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
LE +FPG +RELVSCSNC DYQSR L VR QT K ++ +VHMLN+T CAT R +C
Sbjct: 347 LEGYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTDKKDKTKSYVHMLNSTLCATERALC 405
Query: 341 AILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
ILE +Q E G+ +P+ LR +V V +IPF+ P+ +E KK K+
Sbjct: 406 CILENYQCEDGIIVPEVLRPYVGGV-----EKIPFIAPKPVWAKEEKKSTKK 452
>gi|67469401|ref|XP_650679.1| seryl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
gi|56467329|gb|EAL45293.1| seryl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449708456|gb|EMD47912.1| seryl-tRNA synthetase, putative [Entamoeba histolytica KU27]
Length = 453
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 183/472 (38%), Positives = 242/472 (51%), Gaps = 100/472 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD++LFR + P+ ++++QK R +VE+VD+++ D +W++ D K
Sbjct: 1 MGLDINLFRNQ----PDVIKESQKKRGASVEIVDEILALDNEWKKEGFTLDQTRKELGKI 56
Query: 61 SKVIGEKMKAKEPVGDSSTLP----------------------------------GNHLH 86
K +G K KE L GN +
Sbjct: 57 QKELGMLHKNKENPPTKEVLAEYDVKKKACESKIAELEKSVSELKVKIDAKIKSVGNIVP 116
Query: 87 PSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
SVPV +E N I T G+ K Y H +LI MI G D+E VAG RGY+LKG
Sbjct: 117 DSVPVEMDEKFNKIEVTYGEC-TPKLYHHHELIHMIGGADTERAVKVAGHRGYYLKGWGF 175
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ Y + ++G+TP+ TP+FMR+E+M + AQL+ FDE LY V G G+ V
Sbjct: 176 KLNQALINYGTNFLEQRGFTPIQTPYFMRRELMAKTAQLSDFDETLYHV-GTGKDV---- 230
Query: 207 PEKDELDD-KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
ELDD KYLIATSEQP+ A+H W+ LPIRY+G ST FR+E
Sbjct: 231 ----ELDDQKYLIATSEQPLTALHAGEWILPKQLPIRYMGFSTNFRKEAGAHGKDTWGIF 286
Query: 254 -------------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLD 280
D +S I YRVVNIVSGALN+AAAKK D
Sbjct: 287 RVHQFEKIEQFCMTLPDKSWEMHEEMIKNSRDFFESLKIPYRVVNIVSGALNNAAAKKYD 346
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
LE +FPG +RELVSCSNC DYQSR L VR QT K ++ +VHMLN+T CAT R +C
Sbjct: 347 LEGYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTDKKDKTKSYVHMLNSTLCATERALC 405
Query: 341 AILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
ILE +Q E G+ +P+ LR +V V +IPF+ P+ +E KK K+
Sbjct: 406 CILENYQCEDGIIVPEVLRPYVGGV-----EKIPFIAPKPVWAKEEKKSTKK 452
>gi|440291408|gb|ELP84677.1| seryl-tRNA synthetase, putative [Entamoeba invadens IP1]
Length = 451
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 180/469 (38%), Positives = 238/469 (50%), Gaps = 97/469 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD++LFRT+ P+ ++ +QK R +VE+VD+V+ D W++ + D K
Sbjct: 1 MGLDINLFRTQ----PDVIKASQKKRNASVEVVDEVLALDADWKKKGFELDQTRKELGKE 56
Query: 61 SKVIGEKMKAKEPVGDSSTLP----------------------------------GNHLH 86
K +G K KE T+ GN +
Sbjct: 57 QKELGMLYKNKENPPTQETIDKFNANKKNAEAKIAQLEKEVADIKKQVDAKIKSVGNIVP 116
Query: 87 PSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
SVPV +E N + + G+ + + H +LI MI G D+E VAG RGY+LKG
Sbjct: 117 DSVPVEVDEKFNRVEKKYGECNAKPLHHH-ELIHMIGGADTERAVKVAGHRGYYLKGWGF 175
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ YA +G+TP+ TPFFMR+E+M AQL+ FD+ LY V E V
Sbjct: 176 KLNQALINYATQFLEARGFTPIQTPFFMRRELMARTAQLSDFDDTLYHVGTGKENV---- 231
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR--------------- 251
D D KYLIATSEQP+ A+H WL +PIRY+G ST FR
Sbjct: 232 ---DPDDQKYLIATSEQPLTALHAGEWLLPKQMPIRYMGFSTNFRKEAGAHGKDTWGIFR 288
Query: 252 ---------------------QEDLTKS---------IAYRVVNIVSGALNHAAAKKLDL 281
QE++ K+ I YRVVNIVSGALN++AAKK DL
Sbjct: 289 VHQFEKVEQFCMTMPDKSWDMQEEMIKNSCDFYESLKIPYRVVNIVSGALNNSAAKKYDL 348
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E +FPG +RELVSCSNC DYQSR L VR KK +K+ +VHMLN+T CAT R +C
Sbjct: 349 EGYFPGFNEYRELVSCSNCTDYQSRELDVRLQMDKKGKDKV-YVHMLNSTLCATERALCC 407
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 390
+LE +QTE G+ IP+ LR F V +IPFV P+ +E KK+K
Sbjct: 408 VLENYQTEDGIIIPEVLRPFCGGV-----EKIPFVAPKPVWTKEDKKKK 451
>gi|328768059|gb|EGF78106.1| hypothetical protein BATDEDRAFT_90762 [Batrachochytrium
dendrobatidis JAM81]
Length = 472
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 243/475 (51%), Gaps = 118/475 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVE--LVDKVIENDLKWRQFRHKADNFNKFKNL 59
++D++L R +KGG+PE +R++Q+ R + LVD+V+ D +W++ R +AD NK N
Sbjct: 1 MIDINLLRADKGGNPELIRESQRKRGGDAAALLVDQVLTLDDEWKKARFQADELNKKINQ 60
Query: 60 CSKVIG---------------------EKMKAKEPVGDSST-----------LPGNHLHP 87
K I + +K K+ + + S L GN +H
Sbjct: 61 IGKDIAPLAKAKKLDSPEALKLKQDKEDLLKLKQDLTELSVQKEKLLQSKLRLIGNTVHE 120
Query: 88 SVPVSNNEDENGIV-------RTKGDTEVRKK-------------YSHVDLITMIDGVDS 127
SV VSN+E +N ++ RT+ EV ++ YSH +++ I G D
Sbjct: 121 SVIVSNDEKDNLVIEKWWPKDRTEA-AEVDRRAQLIKDGKGVSGLYSHHEVLEKIGGYDP 179
Query: 128 EAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQ 187
G VAG RGYFL GP V L + L+ Y L ++GYT L+TPFFM++EVM + AQL
Sbjct: 180 VRGTNVAGHRGYFLTGPGVDLNLALMHYGLDFLEKRGYTKLWTPFFMKREVMAKTAQLED 239
Query: 188 FDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEAS-LPIRYLGV 246
FDE LY V G+ GD+ KY+IATSEQPI A H W EA LP +Y G
Sbjct: 240 FDEALYSVEGEA---GDA---------KYMIATSEQPISAFHSGEWFSEADELPKKYAGS 287
Query: 247 STCFRQE-------------------------------------------DLTKSIA--Y 261
STCFR+E + KS+ Y
Sbjct: 288 STCFRKEAGAHGRDTWGIFRVHQFEKVEQFVLTHPEKSWEMHEEMIEVAKEFYKSLGLPY 347
Query: 262 RVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEK 321
V++IVSGALN++AAKK DLEAWFP G ++ELVSCSNC DYQSR L +R+G K +
Sbjct: 348 HVISIVSGALNNSAAKKYDLEAWFPFQGTYKELVSCSNCTDYQSRELEIRFGTKKANDVS 407
Query: 322 IEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 376
++VH LN T AT R IC ILE QTETGV +P+ LR Y+ +PFV
Sbjct: 408 KKYVHALNCTLTATERTICCILENFQTETGVVVPEPLRN-----YMGGKDFLPFV 457
>gi|297791595|ref|XP_002863682.1| hypothetical protein ARALYDRAFT_331078 [Arabidopsis lyrata subsp.
lyrata]
gi|297309517|gb|EFH39941.1| hypothetical protein ARALYDRAFT_331078 [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 238/449 (53%), Gaps = 112/449 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADN----FNKFK 57
+LD+DL+R +PE +R++Q+ +F +V+ VD++I D WRQ ++ D FNK
Sbjct: 1 MLDIDLYRR----NPEIIRESQRRKFASVQDVDEIIILDQLWRQRKYDYDCVQRVFNKIN 56
Query: 58 NLCSKV------IGEKMKAKEPVGDSST------------------LPGNHLHPSVPVSN 93
N +K+ E++K E + +T GN +H SV + +
Sbjct: 57 NSVAKLKISGADATEQIKQAEIIKQEATKKGVEVGEAFAALQDKLLTVGNLIHDSVRICD 116
Query: 94 NEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
+E N + G+ ++D VD++ GA ++G RG+ LKG V L L+
Sbjct: 117 DEAFNEEINVWGEK------------PLLDIVDTKRGAKISGARGFLLKGYGVALNQALI 164
Query: 154 ----------QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
Y+L+ +KG+T + F MRKEVM++ AQL+QFDEELYKVIG+G+
Sbjct: 165 FQVKSCIFIINYSLTFLTKKGFTCIQPNFLMRKEVMEKCAQLSQFDEELYKVIGEGDH-- 222
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED--------- 254
D+KYLIATSEQP+CA H++ W+ + LPIRY G STCFR+E
Sbjct: 223 ---------DEKYLIATSEQPLCAYHQNEWIQPSELPIRYAGYSTCFRKEAGSHGRDTLG 273
Query: 255 ----------------------------LTKS--------IAYRVVNIVSGALNHAAAKK 278
L S I YRVV+ VSGALN+AAAKK
Sbjct: 274 IFHVHQFEKVEQFCITSPNDSWEMLDEMLNNSEEFYQSLKIPYRVVSDVSGALNNAAAKK 333
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE--KIEFVHMLNATACATT 336
DLE WFP S +RELVSCSNC DYQSRRL +RYG K ++ K ++VHMLN+T AT
Sbjct: 334 YDLEGWFPSSETYRELVSCSNCTDYQSRRLRIRYGHKKSNDQQTKNKYVHMLNSTLTATQ 393
Query: 337 RVICAILETHQTETGVRIPDCLRKFVPAV 365
R IC ILE +Q E GV IP+ L+ F+ V
Sbjct: 394 RTICCILENYQREDGVDIPEVLQPFMGGV 422
>gi|83764980|dbj|BAE55124.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391862938|gb|EIT72260.1| Seryl-tRNA synthetase [Aspergillus oryzae 3.042]
Length = 494
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/489 (36%), Positives = 243/489 (49%), Gaps = 113/489 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F +++GG+P KV+++Q+ RF +VD+++ + R+ R++ N
Sbjct: 1 MLDIADFVSDRGGNPNKVKESQRKRFAPESVVDEILTLYEEARRARYEVMQIGSQLNGLQ 60
Query: 62 KVIG--------------EKMKAKEPVGDSSTLP--------------GNHLHPSVPVSN 93
K IG EK ++ D+ L GN++H SVPVSN
Sbjct: 61 KEIGKKKKNKEDASSLLEEKAALEQRKKDAEDLALQKEKQRDSKLRTIGNYVHDSVPVSN 120
Query: 94 NE--------------------DENGIVRT----KGDTEVRKKYSHVDLITMIDGVDSEA 129
NE D+N +V+T E R SH +++T +DG D E
Sbjct: 121 NEVGVYRSPKYSFGKGADMHHKDDNVVVKTWVPENVTVEKRDCLSHHEVLTRLDGYDPER 180
Query: 130 GAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD 189
G + G RGY L G + L + L+ Y L KGY P P FM K++M + AQL QFD
Sbjct: 181 GVKIVGHRGYCLTGYGLFLNLALINYGLEFLWGKGYKPNQPPQFMLKDMMAKTAQLEQFD 240
Query: 190 EELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTC 249
EELYKV +D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC
Sbjct: 241 EELYKV----------TESEDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTC 290
Query: 250 FRQED-----------------------LTK----------------------SIAYRVV 264
+R+E LTK + Y++V
Sbjct: 291 YRKEAGAHGKDAWGIFRVHQFEKIEQFVLTKPEQSWEAFEEMMATSEEFYKSLGLPYQIV 350
Query: 265 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEF 324
IVSGALN+AA+KK DLEAWFP G ++ELVSCSNC DYQ+R L +RYG K + K +
Sbjct: 351 TIVSGALNNAASKKYDLEAWFPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSY 410
Query: 325 VHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDE 383
VH LNAT CAT R +C ILE +Q E G +P+ LRK++P A E +P+ K P D
Sbjct: 411 VHALNATLCATERTLCCILENYQKEDGFIVPEPLRKYIPG-----APEFLPYTKELPKDS 465
Query: 384 EETKKQKKQ 392
K + KQ
Sbjct: 466 TSQKAKGKQ 474
>gi|449546034|gb|EMD37004.1| hypothetical protein CERSUDRAFT_114905 [Ceriporiopsis subvermispora
B]
Length = 452
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/463 (38%), Positives = 239/463 (51%), Gaps = 102/463 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKF---- 56
M LD+ F KGG+ E++R++Q+ R +VELVD+VI+ W + A+N +K
Sbjct: 1 MTLDVLHFIDNKGGNAEEIRESQRKRGLSVELVDEVIQMYTDWVRMDFDANNLSKQVNTI 60
Query: 57 ---------------------KNLCSKVIGEKMKAKE---PVGDSSTLPGNHLHPSVPVS 92
K L ++V+ ++ +AKE + ++ GN + VPVS
Sbjct: 61 QKEIAAKKKAKENADDLVAKKKELDAQVVAKRAEAKEFEQEMRKKASTAGNLVGKGVPVS 120
Query: 93 NNEDENGIVRT-----KGDTEVRKKYS---HVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
ED+N +RT +G T V KK + H +++ +D +D E GA ++G RGYFL
Sbjct: 121 LTEDDNVTLRTWHPDGQGAT-VEKKTNIMPHHEVLLRLDAMDLERGAKISGHRGYFLTND 179
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
V L L+ Y L ++GY + PF M K++M + AQL QFDEELYKVI
Sbjct: 180 GVDLNQALISYGLDFLRKRGYKKIQPPFMMNKDLMAKTAQLDQFDEELYKVIAAE----- 234
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE------DL- 255
D+KYLIATSEQPI H D W PE LP++Y G STCFR+E D+
Sbjct: 235 --------DEKYLIATSEQPISTYHSDEWFDSPETQLPVQYAGYSTCFRKEAGSAGRDMW 286
Query: 256 --------------------------------------TKSIAYRVVNIVSGALNHAAAK 277
+ I YRVV IVSGALN AA++
Sbjct: 287 GIFRVHQFEKVEQFCITEPEKSWEMFDTMVANSEAFYQSLGIPYRVVAIVSGALNLAASQ 346
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLEAWFP GA++ELVSCSNC DYQSRRL VR GQ K + +VHMLN T CAT R
Sbjct: 347 KYDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGQKTKDQARKVYVHMLNGTLCATER 406
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+C I+E +QT G+ IP+ LR Y+ +P+VK P
Sbjct: 407 ALCCIVENYQTPEGLVIPEVLRP-----YMQGREFLPWVKELP 444
>gi|392590235|gb|EIW79564.1| serine-tRNA ligase [Coniophora puteana RWD-64-598 SS2]
Length = 452
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 174/444 (39%), Positives = 229/444 (51%), Gaps = 95/444 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F KGG+ E++R++Q+ R ++ E+VD+VI +W + + + +K N
Sbjct: 1 MTLDVTSFIDRKGGNAEEIRESQRKRGESAEIVDEVIGMYDEWAKKGFEENTLSKQINEI 60
Query: 61 SKVIGEKMKAKEP----VGDSSTLP------------------------GNHLHPSVPVS 92
K IG K KAKE V + TL GN + VP+S
Sbjct: 61 QKQIGAKKKAKENADELVANKKTLDAQLEAMKKATKEYEQEMRKKASTVGNIIAKDVPIS 120
Query: 93 NNEDENGIVRT----KGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
EDEN +RT + +V KK H +++ +D +D + GA VAG RGYFL
Sbjct: 121 QTEDENVTLRTWHPDGPNAQVEKKTDIMPHHEVLLRLDAMDLDRGAKVAGHRGYFLTDDG 180
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
V L L+ YAL +GY + PF + K+VM + AQL QFDEELYKVI
Sbjct: 181 VDLNQALISYALDFLRGRGYKKIQPPFMVNKDVMAKTAQLDQFDEELYKVIASE------ 234
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE------DL-- 255
D+KYLIATSEQPI A H+D W P+ LPI Y G STCFR+E D+
Sbjct: 235 -------DEKYLIATSEQPISAFHQDEWFEDPKTQLPIYYAGYSTCFRKEAGSAGRDMWG 287
Query: 256 -------------------------------------TKSIAYRVVNIVSGALNHAAAKK 278
+ + YRVV IVSGALN AAAKK
Sbjct: 288 IFRVHQFEKVEQFVITAPDASWEAFDTMLGNSEAFYQSLGLPYRVVAIVSGALNLAAAKK 347
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLEAWFP G ++ELVSCSNC DYQSRRL VR G K ++ +VHMLN T CAT R
Sbjct: 348 CDLEAWFPFQGDYKELVSCSNCTDYQSRRLEVRCGLRSKDQQRKVYVHMLNGTMCATERA 407
Query: 339 ICAILETHQTETGVRIPDCLRKFV 362
+C ++E +QT G+R+P+ LR ++
Sbjct: 408 LCCLVENYQTPEGLRVPEVLRPYM 431
>gi|157865542|ref|XP_001681478.1| putative seryl-tRNA synthetase [Leishmania major strain Friedlin]
gi|68124775|emb|CAJ02371.1| putative seryl-tRNA synthetase [Leishmania major strain Friedlin]
Length = 474
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 152/333 (45%), Positives = 188/333 (56%), Gaps = 65/333 (19%)
Query: 82 GNHLHPSVPVSNNEDE-NGIVRTKGDTEVRKKYSHVDLITMIDGVD-SEAGAIVAGGRGY 139
GN LH SVPVSN+E+ N +VRT GD R + +HVD + + +D S+ +AGGR +
Sbjct: 137 GNVLHESVPVSNDEETGNVVVRTFGDVTRRMRMTHVDCMERLGLMDTSKTVTAMAGGRAF 196
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
L+G V LQ L+ YAL+ I +GY P Y PFF+ KE M VAQL+ FDE LYKV G G
Sbjct: 197 VLRGGLVQLQFALISYALNFLIARGYEPFYPPFFLNKEYMGAVAQLSDFDESLYKVSGDG 256
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
D+KYLIATSE PI A H + W E PI+Y GVS+CFR+E
Sbjct: 257 -------------DEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAGAHGR 303
Query: 254 ---------------------------------------DLTKSIA--YRVVNIVSGALN 272
D +S+ YRV+NI SGALN
Sbjct: 304 DTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICSGALN 363
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK---MNEKIEFVHMLN 329
+AAAKK DLEAWFPGSGAFRELVSCSNC DYQ+R + R+G K + E+ HMLN
Sbjct: 364 NAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTASNTKEYCHMLN 423
Query: 330 ATACATTRVICAILETHQTETGVRIPDCLRKFV 362
T CA TR +C I E +QTE G+ IP+ LR F+
Sbjct: 424 GTLCAVTRTMCCICENYQTEEGIVIPEVLRPFM 456
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 1 MVLDLDLFRTEKGGDPEK---VRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFK 57
M LD+ LFR DPE VR++++ R+ E+VD +IE D +WR+ + + K
Sbjct: 1 MGLDIQLFR-----DPEMADIVRESERRRYARPEIVDDIIEIDKRWRRTQFLTEASKKMI 55
Query: 58 NLCSKVIGEKMKAKEPVGDSSTLPGN 83
N CSK +G K KAKE GD S +P +
Sbjct: 56 NTCSKAVGAKKKAKEADGDVSEVPAD 81
>gi|164656381|ref|XP_001729318.1| hypothetical protein MGL_3353 [Malassezia globosa CBS 7966]
gi|159103209|gb|EDP42104.1| hypothetical protein MGL_3353 [Malassezia globosa CBS 7966]
Length = 440
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 181/449 (40%), Positives = 232/449 (51%), Gaps = 88/449 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR------------QFRHK 49
++DL L + EKGG+P+ VR++Q+ R VELVD+V+ W + +
Sbjct: 1 MIDLQLLQVEKGGNPDLVRESQRKRNAPVELVDEVLSMYKHWEVNATQKAITAKKKAKED 60
Query: 50 AD-NFNKFKNLCSKVIGEK---MKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRT-- 103
AD K K L +K+I K +A+ + + GN + VPVSN ED+N VRT
Sbjct: 61 ADAELAKKKELDAKIIEFKPQVAEAERAMRAKAVTIGNIVGDKVPVSNTEDDNLTVRTWH 120
Query: 104 ----KGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS 158
E R + SH +++ ++ D+E GA ++G RG+FL G V L L+ Y L
Sbjct: 121 PEGPNAQFEKRIDFVSHHEVMYRLELFDTERGAKISGHRGFFLTGDGVDLNQALINYGLD 180
Query: 159 KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLI 218
+K Y + TPF MR+E M + AQL QFDEELYKV G DE DDKYLI
Sbjct: 181 FLRKKNYKKMMTPFMMRREHMAKTAQLEQFDEELYKVTG------------DE-DDKYLI 227
Query: 219 ATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE----------------------- 253
ATSEQPI A H + W P LPI+Y G STCFR+E
Sbjct: 228 ATSEQPISAFHSNEWFDRPAEQLPIKYAGYSTCFRKEAGSHGKDTWGIFRVHQFEKIEQF 287
Query: 254 ---DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAF 291
D S I YRVV IVSGALN+AAA K DLEAWFP G
Sbjct: 288 CITDPASSWEMLDHMLANSEEFYQSLQIPYRVVAIVSGALNNAAAMKYDLEAWFPFQGEH 347
Query: 292 RELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG 351
+ELVSCSNC DYQSRRL VR G K+ + K ++ HMLN T CAT R +C ++E QT G
Sbjct: 348 KELVSCSNCTDYQSRRLEVRCGMKKQGDTKKQYCHMLNGTLCATERALCCLVENWQTSEG 407
Query: 352 VRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+RIP L+ Y+ +PF K P
Sbjct: 408 LRIPPVLQP-----YMQGRDFLPFTKDLP 431
>gi|302668108|ref|XP_003025631.1| hypothetical protein TRV_00198 [Trichophyton verrucosum HKI 0517]
gi|291189748|gb|EFE45020.1| hypothetical protein TRV_00198 [Trichophyton verrucosum HKI 0517]
Length = 468
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 175/471 (37%), Positives = 236/471 (50%), Gaps = 99/471 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ E+GGDP+KV+++Q+ RF + ELVD+V+ R+ R++A N
Sbjct: 1 MLDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSRINAVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTLP----------------------------GNHLHPSVPVSN 93
K IG K + KE D GN++ SVPV
Sbjct: 61 KEIGMKKRNKEDATDLLAEKAKLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPVDK 120
Query: 94 NEDENGIVRTKG--DTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NED N ++RT D +V K+ SH +++ +DG D E G + G RGY L G + L
Sbjct: 121 NEDNNAVLRTWAPPDVKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLFLN 180
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV Y L KGY P P FM + M + AQL QFDEELYKV +
Sbjct: 181 LALVNYGLEFLFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKV----------TESE 230
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D DKYLIATSEQP+ A+H W+ E LPI +TC+R+E
Sbjct: 231 DPSTDKYLIATSEQPLSALHDGEWILEKELPI-----NTCYRKEAGAHGKDAWGIFRVHQ 285
Query: 254 ---------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAW 284
+ KS I Y+V+ IVSGALN+AA+KKLDLEAW
Sbjct: 286 FEKIEQFLITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAW 345
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQ+R L +R+G K + K + H LNAT CAT R +C ILE
Sbjct: 346 FPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILE 405
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEG 395
+Q E G+ +P+ LRK++P +P+V+ P D T QK + +G
Sbjct: 406 NYQQEDGIIVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVKAKG 449
>gi|396495307|ref|XP_003844514.1| similar to seryl-trna synthetase [Leptosphaeria maculans JN3]
gi|312221094|emb|CBY01035.1| similar to seryl-trna synthetase [Leptosphaeria maculans JN3]
Length = 476
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 170/458 (37%), Positives = 231/458 (50%), Gaps = 93/458 (20%)
Query: 8 FRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEK 67
F E+GGDPEK+R +Q+ R VELVD++I + R+ ++ A N K IG+K
Sbjct: 24 FIKERGGDPEKIRDSQRKRNAPVELVDEIIADFEDHRKTQYAATQIGSSINAIQKQIGQK 83
Query: 68 MKAKEPVGD----------------------------SSTLPGNHLHPSVPVSNNEDENG 99
KAKE D + GN+++ VPVS ED+N
Sbjct: 84 KKAKENADDLLAEKVELEKKKKAQQEEADEKLKKLNIKAKSIGNYVYKDVPVSTTEDDNA 143
Query: 100 IVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
+V+T + + ++ H ++T +DG D E G + G RGY LK + L + L+
Sbjct: 144 VVKTWAPADRKAEFKKDGIPHHGVLTRLDGYDPERGVKIVGHRGYCLKNYGLFLNLALIN 203
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
Y L KGYTP PF M ++ M + AQL+ FD+ELYKV +K PE D
Sbjct: 204 YGLEFLFNKGYTPNQPPFMMLRDQMAKTAQLSDFDDELYKVTESKDK-----PET----D 254
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---------------------- 252
KYLIATSEQP+ +H + WL LPI+Y G ST FR+
Sbjct: 255 KYLIATSEQPLSGLHSEEWLQAEDLPIKYAGYSTNFRKEAGSHGKDAWGIFRIHQFEKVE 314
Query: 253 ---------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFP--G 287
E+ +S+ Y+VV IVSGALN+AAA K DLEAWFP G
Sbjct: 315 QFLLTHPEKSWEAFDEMLATSEEFYQSLGLPYQVVAIVSGALNNAAAMKRDLEAWFPVTG 374
Query: 288 SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
G ++ELVS SNC DYQ+R L +R+G K + E+VH LN T CAT R +C ILE +Q
Sbjct: 375 GGEYKELVSISNCTDYQTRELEIRHGAKKLNATRKEYVHALNGTLCATERTLCCILENYQ 434
Query: 348 TETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 385
T G +P LRK++P+ + +PFVK +EE
Sbjct: 435 TPDGFTVPSVLRKYIPS----QPEFLPFVKEWKQSKEE 468
>gi|159119702|ref|XP_001710069.1| Seryl-tRNA synthetase [Giardia lamblia ATCC 50803]
gi|157438187|gb|EDO82395.1| Seryl-tRNA synthetase [Giardia lamblia ATCC 50803]
Length = 457
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/473 (37%), Positives = 236/473 (49%), Gaps = 126/473 (26%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFR KGG+PEKV+++Q+ R+ + E+VDKVIE D W ++A +K N
Sbjct: 1 MVLDINLFRVSKGGNPEKVKESQRRRYASTEIVDKVIELDKAWVSKDYEASQLSKELNQL 60
Query: 61 SKVIGEKMKAKEPVGDSS----------------------------TLPGNHLHPSVPVS 92
+K G MKAK P + S GN + +V V
Sbjct: 61 NKDFGAAMKAKSPTDELSKKIAANKQETERVKKEVGQLLAERNAVLNTIGNIVCDAVVVD 120
Query: 93 NNEDENGIVRTKGDTEVR---------KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
NNED N +V T D VR K +HV L+T +D G ++G RGYFL G
Sbjct: 121 NNEDNNKVVYT-NDAVVRANPSPNGVEKTLNHVTLMTNCRMMDCPRGVKISGNRGYFLTG 179
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
L L+QYAL ++GY + TPFFM +E M QL FDE+LYKV G+G
Sbjct: 180 YGALLNQALIQYALKFLTDRGYQAMQTPFFMEQEAMSCCCQLEDFDEQLYKVSGEG---- 235
Query: 204 DSAPEKDELDDKYLIATSEQPICAVH--------RDSWLPEASLP--------------I 241
+DKYLIATSEQP+CA H + + E + I
Sbjct: 236 ---------NDKYLIATSEQPLCAYHMGEIINFSKQGQIAELTYNSIKTGKQEKKTLECI 286
Query: 242 RYLGVSTCFRQE--------------------------------DLTK------------ 257
RY G+STCFR+E D+ +
Sbjct: 287 RYAGMSTCFRKEVGRHGHDTLGIFRIHQFEKIEQIVVCKEEDSWDMMEYMIDNCRAFFDS 346
Query: 258 -SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQ 314
I YRVV IVSGALN+AAA K DLEA+FPGS +RELVSCSNC DYQSR L ++Y G+
Sbjct: 347 LMIPYRVVIIVSGALNNAAAMKYDLEAYFPGSNTYRELVSCSNCTDYQSRSLDIKYQDGK 406
Query: 315 TKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 367
KK +VH+LN+T AT R +C ++E +QT TG+++P L+ +V A ++
Sbjct: 407 DKK------YVHLLNSTLSATERTLCCLVENYQTPTGIKVPVPLQSYVGADFL 453
>gi|165940924|gb|ABY75307.1| seryl-tRNA synthetase [Ovis aries]
Length = 245
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/249 (56%), Positives = 162/249 (65%), Gaps = 51/249 (20%)
Query: 102 RTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWI 161
R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYFLKGP V L+ L+Q+AL
Sbjct: 1 RIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGPLVFLEQALIQFALRTLE 60
Query: 162 EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
+GYTP+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG + D + ++KYLIATS
Sbjct: 61 SRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSERSDD----NSFEEKYLIATS 116
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------------------- 252
EQPI A+HRD WL LPI+Y G+STCFRQ
Sbjct: 117 EQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSP 176
Query: 253 ----------------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFREL 294
E+ +S I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFREL
Sbjct: 177 HDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFREL 236
Query: 295 VSCSNCLDY 303
VSCSNC DY
Sbjct: 237 VSCSNCTDY 245
>gi|409047701|gb|EKM57180.1| hypothetical protein PHACADRAFT_254765 [Phanerochaete carnosa
HHB-10118-sp]
Length = 450
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/461 (38%), Positives = 233/461 (50%), Gaps = 100/461 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F KGG+ +++R++Q+ R +VE+VD+VI+ W + +A+N +K N
Sbjct: 1 MTLDVLHFIDNKGGNAQEIRESQRKRGLSVEIVDEVIQMYQDWVKMDFEANNISKEVNAV 60
Query: 61 SKVIGEKMKAKEPVGD-----------------------------SSTLPGNHLHPSVPV 91
K I K KAKE + ++TL GN + VPV
Sbjct: 61 QKEIAVKKKAKENADELVAKKKQLDEQVAAKRVESKEHEAKMRQKAATL-GNIVGKDVPV 119
Query: 92 SNNEDENGIVRT--KGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
S EDEN +RT EV KK H +++ +D +D E G +AG RGYFL +
Sbjct: 120 SLTEDENVTLRTWHPQGAEVEKKTDIMPHHEVLLRLDAMDLERGTKIAGHRGYFLTNDGI 179
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ Y L +KGY + PF M K+ M + AQL QFDEELYKVI
Sbjct: 180 DLNQALITYGLHFLRKKGYKNIQPPFMMNKDQMAKTAQLDQFDEELYKVIADD------- 232
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE------DL--- 255
D+KYLIATSEQPI A H + W PE LP++Y G STCFR+E D+
Sbjct: 233 ------DEKYLIATSEQPISAYHSNEWFESPETQLPLKYAGYSTCFRKEAGSAGRDMWGI 286
Query: 256 ------------------------------------TKSIAYRVVNIVSGALNHAAAKKL 279
+ +I YR V IVSGALN AA++K
Sbjct: 287 FRVHQFEKIEQFCITSPEKSWEIFDQMVGTSEEFYQSLNIPYRAVAIVSGALNLAASQKY 346
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLEAWFP GA++ELVSCSNC DYQSRRL VR G K ++ +VHMLN T CAT R +
Sbjct: 347 DLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKTKDQQRKIYVHMLNGTLCATERAL 406
Query: 340 CAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
C I E +QT G+ +P+ LR Y+ +P+VK P
Sbjct: 407 CCIAENYQTAEGLVVPEVLRP-----YMQGRDFLPWVKELP 442
>gi|333986647|ref|YP_004519254.1| seryl-tRNA synthetase [Methanobacterium sp. SWAN-1]
gi|333824791|gb|AEG17453.1| Seryl-tRNA synthetase [Methanobacterium sp. SWAN-1]
Length = 429
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 236/434 (54%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ LFR + + +RK++K RF+N + VDKVIE D KWR+ K ++ +N S
Sbjct: 1 MLDIKLFRE----NSDLIRKSEKIRFRNTKNVDKVIEYDKKWREGIQKLNSLRAERNTLS 56
Query: 62 KVIGE------------KMKAKEPVGDSSTLP-----------------GNHLHPSVPVS 92
K + ++KAKE G+ + L GN + +VPVS
Sbjct: 57 KSFKKARKQGPEELKKLQIKAKEVAGEVTVLEPQIAEFIQKRDEYRYKVGNIVDETVPVS 116
Query: 93 NNEDENGIVRTKG--DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
E++N I+R G + K SHVDLI IDG D + A VAG R Y+LK V L +
Sbjct: 117 ETEEDNDIIRKSGVIPSFSFKPQSHVDLIENIDGADIKRAAEVAGARFYYLKADLVYLNM 176
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+++A+ E+G+TP YTPFF++K+V++E A+LA F+E LYKV G
Sbjct: 177 ALMKFAIDFLSEQGFTPFYTPFFIKKDVIKETAELADFEETLYKVEG------------- 223
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------------ 252
+D ++IAT+EQ + A+HR + E +LP +Y G+STCFR+
Sbjct: 224 --EDLFMIATAEQTLAALHRGEIIDERTLPRKYCGISTCFRREAGSHGKDTRGIFRVHQF 281
Query: 253 ------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
E+L K+ I YRVV+IVS ALN A+KK DLE WF
Sbjct: 282 EKIEQFVFCNKEDTEKIHEELLKNAETIYQKLGIPYRVVSIVSSALNDNASKKYDLEGWF 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
PGS +RELVSC+NCLDYQ+R+L RYG + ++ ++ H LN+TA AT R IC ILE
Sbjct: 342 PGSDTYRELVSCTNCLDYQARKLNARYG-IQGDSDSLKICHTLNSTAIATERTICCILEN 400
Query: 346 HQTETG-VRIPDCL 358
+Q E G V++PD L
Sbjct: 401 YQQEDGRVKVPDVL 414
>gi|303279198|ref|XP_003058892.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460052|gb|EEH57347.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 382
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 206/381 (54%), Gaps = 89/381 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR +KGG+PE VR++Q+ RF VE VD VI D KWR R + DN N+ N +
Sbjct: 1 MLDINLFREDKGGNPELVRESQRRRFARVEDVDDVIALDAKWRDARWELDNINQEFNKAN 60
Query: 62 KVIGEKMKAKEPVGDSSTLP----------------------------GNHLHPSVPVSN 93
K + +K KA E D+ T GN +H SVPVS+
Sbjct: 61 KEVSKKKKAGEDADDAITFVKTLIEKRAALEEDEKRCEAEVNALLVKIGNLVHDSVPVSD 120
Query: 94 NEDENGIVRTKG-DTEVRKKY--SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
+E N + RT G DT+ ++ +HVDLI M+D D+E G VAGGRGYFLKG V L
Sbjct: 121 DEANNAVYRTFGLDTKRTEENLPNHVDLIAMLDIADTERGTDVAGGRGYFLKGAGVLLNQ 180
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ YAL+ +G+TPL TPFFMRK+ M E AQLA FDE+LYKV S+ E
Sbjct: 181 ALINYALTFLAGRGHTPLATPFFMRKDRMAECAQLADFDEQLYKV---------SSGEDS 231
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
E DKYLIATSEQ C+ R W+ LP+R+ G STCFR+E
Sbjct: 232 E--DKYLIATSEQTCCSYLRKRWIQPKELPMRFAGYSTCFRKEAGSHGRDTLGIFRVHQF 289
Query: 254 -----------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDLEA 283
D +S I Y VVNIVSG LN AAAKK DLEA
Sbjct: 290 EKVEQFIAVSPDGDESWKEMERLIGNSEAFYQSLGIPYNVVNIVSGELNDAAAKKYDLEA 349
Query: 284 WFPGSGAFRELVSCSNCLDYQ 304
WFP S FRELVSCSNCLD+Q
Sbjct: 350 WFPSSKTFRELVSCSNCLDFQ 370
>gi|403412364|emb|CCL99064.1| predicted protein [Fibroporia radiculosa]
Length = 452
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/462 (38%), Positives = 232/462 (50%), Gaps = 100/462 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F KGG+ E++R++Q+ R E+VD+V++ + W + + NK N
Sbjct: 1 MTLDVLHFIDNKGGNAEEIRESQRKRGLAPEIVDEVMQMYVDWVKMDFDTNAINKQVNAI 60
Query: 61 SKVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVS 92
K I K KAKE D ++ GN + VPVS
Sbjct: 61 QKDIAAKRKAKENADDLVAQKKELDAQVITRKQESKEFAQKMKQKASTVGNIVGRDVPVS 120
Query: 93 NNEDENGIVRT-KGDTE---VRKKYS---HVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
ED+N +RT D E V KK + H +++ +D +D E GA ++G RGY+L
Sbjct: 121 LTEDDNKTLRTWHPDGEGVAVEKKTNIMPHHEVLLRLDAMDLERGAKISGHRGYYLTNDG 180
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
+ L L+ Y L ++G+ + PF M K+VM + AQL QFDEELYKVI
Sbjct: 181 IDLNQALISYGLDFLRKRGHKKIQPPFMMNKDVMAKTAQLDQFDEELYKVIAAD------ 234
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED--------- 254
D+KYLIATSEQPI A H D W PE LPI+Y G STCFR+E
Sbjct: 235 -------DEKYLIATSEQPISAFHSDEWFDSPETQLPIKYAGYSTCFRKEAGSAGRDMWG 287
Query: 255 --------------LTK----------------------SIAYRVVNIVSGALNHAAAKK 278
LT+ I YRVV IVSGALN AAA+K
Sbjct: 288 IFRVHQFEKIEQFCLTEPEKSWEMFDTMVANSEAFYQSLGIPYRVVAIVSGALNLAAAQK 347
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLEAWFP GA++ELVSCSNC DYQSRRL VR GQ K + +VHMLN T CAT R
Sbjct: 348 YDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGQKTKDQTRKIYVHMLNGTLCATERA 407
Query: 339 ICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+C ++E +QT G+ +P+ LR Y+ +P+VK P
Sbjct: 408 LCCLVENYQTPDGLVVPEVLRP-----YMQGRDFLPWVKELP 444
>gi|70941484|ref|XP_741024.1| seryl-tRNA synthetase [Plasmodium chabaudi chabaudi]
gi|56519139|emb|CAH78580.1| seryl-tRNA synthetase, putative [Plasmodium chabaudi chabaudi]
Length = 519
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 248/519 (47%), Gaps = 164/519 (31%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFRTEKGG+PEK+++++K+RF +V VDKVIE D KWR+ K + K NL
Sbjct: 1 MVLDINLFRTEKGGNPEKIKESEKNRFNDVSNVDKVIEYDEKWRKSIFKLEELKKNINLI 60
Query: 61 SKVIGEKMK----------AKEPVGDSSTLP--------------------GNHLHPSVP 90
+K IG K K ++ + +P GN L V
Sbjct: 61 NKTIGNKKKEDKNANVEDLKQKSLSMKEEIPLIQNEEKHLLKQRNTYLAKVGNILSSKVV 120
Query: 91 VSNNEDENGIVRT------------------KGDT---------------------EVRK 111
++N+E+ N +VRT KGDT E++K
Sbjct: 121 INNDEEHNKVVRTWGECKNYEPTDLEKSDTTKGDTPNTKREVGNNNDGQNKVNIISEIKK 180
Query: 112 KYS-HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYT 170
KY H DL+ I GV+ + G +VAG RGY+L G L ++QYA++ + K YTP+Y
Sbjct: 181 KYYYHYDLLRKIGGVNFKKGVLVAGHRGYYLTGAGFLLNNAIMQYAINFLVNKKYTPVYP 240
Query: 171 PFFMRKEVMQEVAQLAQFDEELYKV----IGKGEKVGDSAPEKDEL--------DDKYLI 218
PFFM+K +M+E A+L F+E LYK+ + E +A DD +LI
Sbjct: 241 PFFMKKTIMEECAELDDFEETLYKISSSSVASAEDPKITANNNSNNISNEKSNRDDLFLI 300
Query: 219 ATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------------- 252
ATSEQP+CA+HRD L LP++Y+G+S+CFR+
Sbjct: 301 ATSEQPLCALHRDETLESRYLPLKYVGISSCFRKEAGAHGKDIRGILRVHQFDKVEQFCI 360
Query: 253 ----------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRE 293
E++ K+ I Y++VNIVSGALN+AAA K D+E +FP SG +RE
Sbjct: 361 SLPQTSYKLHEEMIKTCEEFYQSLNIPYKIVNIVSGALNNAAALKYDIEGYFPSSGQYRE 420
Query: 294 LVSCSNCLDYQSRRLLVRY--------GQTKKMNEKIE---------------------- 323
LVSCSNC DYQS L +RY G TK +K +
Sbjct: 421 LVSCSNCTDYQSINLNIRYTDSNIKIAGITKSSKDKNDENTKDETKDEYVDSEYEKFNHD 480
Query: 324 -------FVHMLNATACATTRVICAILETHQTETGVRIP 355
+VH+LN T A R +C +LE +Q G+ +P
Sbjct: 481 FPVENKNYVHLLNGTMVAGQRFLCCLLENYQNGEGIMVP 519
>gi|395329294|gb|EJF61681.1| serine-tRNA ligase [Dichomitus squalens LYAD-421 SS1]
Length = 450
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 177/461 (38%), Positives = 237/461 (51%), Gaps = 100/461 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F KGG+ E++R++Q+ R +VE+VD+VI+ W + +A++ K N
Sbjct: 1 MTLDVLHFIDNKGGNAEEIRESQRRRGLSVEIVDEVIQMYADWVKLDFEANSLAKSVNSV 60
Query: 61 SK-------------------------VIGEKMKAKE---PVGDSSTLPGNHLHPSVPVS 92
K VI ++ +AKE + ++ GN + VPVS
Sbjct: 61 QKEIAAKKKAKENADELVAKKKEIDAQVIAKRNEAKELEAQMRQKASTVGNIVGKDVPVS 120
Query: 93 NNEDENGIVRT--KGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
ED+N +RT EV KK H +++ +D +D E GA + G RGYFL +
Sbjct: 121 LTEDDNKTLRTWHPESKEVEKKTDIMPHHEVLLRLDAMDLERGAKITGHRGYFLTNDGID 180
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L L+ Y L ++GY + PF M K+VM + AQL QFDEELYKVI
Sbjct: 181 LNQALISYGLDFLRKQGYKKIQPPFMMNKDVMAKTAQLDQFDEELYKVIAAE-------- 232
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE------DL---- 255
D+KYLIATSEQPI A H D W PE LPI+Y+G STCFR+E D+
Sbjct: 233 -----DEKYLIATSEQPISAFHSDEWFDSPETQLPIKYVGYSTCFRKEAGSAGRDMWGIF 287
Query: 256 -----------------------------------TKSIAYRVVNIVSGALNHAAAKKLD 280
+ I YRVV IVSGALN AA++K D
Sbjct: 288 RVHQFEKVEQFCITEPEKSWEVFDQMVANSEAFYQSLKIPYRVVAIVSGALNLAASQKYD 347
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-QTKKMNEKIEFVHMLNATACATTRVI 339
LEAWFP G ++ELVSCSNC DYQSRRL VR G +TK+ K+ +VHMLN T CAT R +
Sbjct: 348 LEAWFPFQGQYKELVSCSNCTDYQSRRLEVRCGLKTKEQTRKV-YVHMLNGTLCATERAL 406
Query: 340 CAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
C I+E +QT G+ +P+ LR Y+ +P+VK P
Sbjct: 407 CCIVENYQTPEGLVVPEVLRP-----YMQGREFLPWVKELP 442
>gi|393216541|gb|EJD02031.1| seryl-tRNA synthetase [Fomitiporia mediterranea MF3/22]
Length = 452
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 182/463 (39%), Positives = 240/463 (51%), Gaps = 102/463 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F KGG+ E++R++Q+ R E+VD+VI+ W + + + +K N
Sbjct: 1 MTLDVLHFIDSKGGNAEEIRESQRKRGLPFEIVDEVIQMYTDWVKMDFEVNQTSKEINAV 60
Query: 61 SKVIGEKMKAKEPVGD-----------------------------SSTLPGNHLHPSVPV 91
K I K KAKE + +ST+ GN + SVPV
Sbjct: 61 QKNIAAKKKAKENADELVAQKKELDALKEKRLKEAKEHETAMRVKASTI-GNIVGKSVPV 119
Query: 92 SNNEDENGIVRT----KGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
S ED+N +RT + +V +K H +++ +D +D E GA +AG RG+FL G
Sbjct: 120 SLTEDDNATLRTWHPDGPNGQVAQKTDIMPHHEVLLRLDAMDLERGAKIAGHRGFFLTGD 179
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
V L L+ Y L +KGY + PFFM K+ M + AQL QFDEELYKV
Sbjct: 180 GVDLNQALISYGLDFLRKKGYKKIQPPFFMNKDQMGKTAQLDQFDEELYKV--------- 230
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE------DL- 255
+A E DDKYLIATSEQPI A++ D W P+A LPIRY G STCFR+E D+
Sbjct: 231 TASE----DDKYLIATSEQPISAMYADEWFEDPKAQLPIRYAGYSTCFRKEAGAAGRDMW 286
Query: 256 --------------------------------------TKSIAYRVVNIVSGALNHAAAK 277
+ + YRVV IVSGALN AAA+
Sbjct: 287 GIFRVHQFEKVEQFVITEPENSWEMLESMIEVAEAFYQSLGLPYRVVAIVSGALNLAAAQ 346
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLEAWFP GA++ELVSCSNC DYQSRRL VR G K+ + +VHMLN T CAT R
Sbjct: 347 KYDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKKQDQTRKLYVHMLNGTLCATER 406
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+C + E +QT G+R+P+ LR Y+ G +P+VK P
Sbjct: 407 ALCCLAENYQTPEGLRVPEALRP-----YMGGRGFLPWVKELP 444
>gi|353236085|emb|CCA68087.1| probable serine-tRNA ligase, cytosolic [Piriformospora indica DSM
11827]
Length = 452
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 177/470 (37%), Positives = 235/470 (50%), Gaps = 101/470 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ +F +KGGDPE +R++Q+ R +VE+VD+VI +W + + NK N
Sbjct: 1 MTLDIHMFIKDKGGDPEVIRESQRKRGHSVEVVDEVIAMYEEWVKQYFQLGEINKKINAV 60
Query: 61 SKVIGEKMKAKEP----VGDSSTLP------------------------GNHLHPSVPVS 92
K I K KAKE +G L GN ++ VPVS
Sbjct: 61 QKEITAKKKAKEDASEFMGQKVVLDTQQKEQQKVVADAEIAMKIKAGGIGNLIYKDVPVS 120
Query: 93 NNEDENGIVRT------KGDT--EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
+NED N I+R G+T + +H +++ + VD E GA VAG RGY+L GP
Sbjct: 121 DNEDNNEIIRKWAPQDHTGETPNTIPDCLAHHEVMLRLGAVDLERGANVAGHRGYYLTGP 180
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
V L L+ Y L ++ + + PFFM K+ M AQL +FDE LYKV G
Sbjct: 181 GVRLNQALINYGLEFLEKRNFLLMQPPFFMHKDAMARTAQLDEFDEALYKVSG------- 233
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEDLTK----- 257
DE+ DKYLIATSEQPI A H + W P LP+RY G STCFR+E +
Sbjct: 234 -----DEI-DKYLIATSEQPISAYHMNEWFEAPAKDLPLRYGGYSTCFRKEAGSSGRDVW 287
Query: 258 ----------------------------------------SIAYRVVNIVSGALNHAAAK 277
+ YR+V IVSGALN AAAK
Sbjct: 288 GIFRVHQFEKVEQFCITEPEKSWEMFEEMVGNSEAFYQSLGLPYRLVAIVSGALNLAAAK 347
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLEAWFP A++ELVS SNC DYQSR+L VR G K + K +VHMLN T CAT R
Sbjct: 348 KYDLEAWFPYQQAYKELVSTSNCTDYQSRKLEVRCGLKKTGDTKKVYVHMLNGTLCATER 407
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 387
+C ++E +QT G+RIP+ L+ Y+ +PF++ P + + K
Sbjct: 408 ALCCLVENYQTPEGLRIPEVLQP-----YMGGKDFLPFIRELPKNYQRKK 452
>gi|207346845|gb|EDZ73214.1| YDR023Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 437
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 224/450 (49%), Gaps = 109/450 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F +KGG+PE +R++QK R +VE+VD++I + W + R + D NK N
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG K K KE D+S L GN +HPSV
Sbjct: 61 KDIGLKFKNKE---DASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVV 117
Query: 91 VSNNEDENGIVRTKGDTEVRK------------KYSHVDLITMIDGVDSEAGAIVAGGRG 138
VSN+E+ N +VRT ++ SH +++ +DG D + G + G RG
Sbjct: 118 VSNDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRG 177
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YF + V L L+ Y L KGY PL P M KE+M + AQL++FDEELYKVI
Sbjct: 178 YFFRNYGVFLNQALINYGLQFLAAKGYIPLQAPVMMNKELMSKTAQLSEFDEELYKVI-- 235
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQ---- 252
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+
Sbjct: 236 -----------DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 284
Query: 253 ---------------------------------------EDLTKSIA--YRVVNIVSGAL 271
E+ KS+ YR+V IVSG L
Sbjct: 285 HGKDAWGVFRVHAFEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGEL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G K + + ++VH LN+T
Sbjct: 345 NNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNST 404
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKF 361
AT R +C ILE +QTE G C R F
Sbjct: 405 LAATQRALCCILENYQTEDGF---GCTRSF 431
>gi|389746133|gb|EIM87313.1| serine-tRNA ligase [Stereum hirsutum FP-91666 SS1]
Length = 452
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 172/458 (37%), Positives = 233/458 (50%), Gaps = 98/458 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F KGG+ E++R++Q+ R +VELVD+VI+ W + A+ +K N
Sbjct: 1 MTLDVLHFIDSKGGNSEEIRESQRKRGHSVELVDEVIQMYADWVKMDFDANALSKDVNAI 60
Query: 61 SKVIGEKMKAKEPVGD-----------------------------SSTLPGNHLHPSVPV 91
K IG K KAKE + +ST+ GN + PV
Sbjct: 61 QKQIGSKKKAKENADELVAQKKALDAQVEAKRKETREFEVTMRQKASTI-GNIVGKGAPV 119
Query: 92 SNNEDENGIVRT----KGDTEVRKKYS---HVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
S ED+N ++ + +V KK + H +++ +D +D + GA +AG RGY+L
Sbjct: 120 SLTEDDNTTLKLWHPDGPNAQVEKKTNIMPHHEVLLRLDAMDLDRGAKIAGHRGYYLTND 179
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
+ L L+ Y L ++GY + PF M K+ M + AQL QFDEELYKVI
Sbjct: 180 GIDLNQALISYGLDFLRKRGYKKIQPPFMMNKDQMAKTAQLDQFDEELYKVIASD----- 234
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE------DL- 255
D+KYLIATSEQPI A H D W P+ LPI+Y G STCFR+E D+
Sbjct: 235 --------DEKYLIATSEQPISAFHSDEWFESPDTQLPIQYAGYSTCFRKEAGSAGRDMW 286
Query: 256 --------------------------------------TKSIAYRVVNIVSGALNHAAAK 277
+ I YRVV IVSGALN AAA+
Sbjct: 287 GIFRVHQFEKVEQFCITAPDKSWEMFETMVANSEAFYQSLGIPYRVVGIVSGALNLAAAQ 346
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLEAWFP GA++ELVSCSNC DYQSRRL VR G K + +VHMLN T CAT R
Sbjct: 347 KFDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKKSDQTRKVYVHMLNGTLCATER 406
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAV-YVNEAGEIP 374
+C ++E +QT G+ +P+ LR ++ ++ A E+P
Sbjct: 407 ALCCLVENYQTPDGLVVPEVLRPYMQGRDFLPWAKELP 444
>gi|308161777|gb|EFO64212.1| Seryl-tRNA synthetase [Giardia lamblia P15]
Length = 457
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 174/467 (37%), Positives = 230/467 (49%), Gaps = 124/467 (26%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFR KGG+PEK++++Q+ R+ + E+VDKVIE D W ++A +K N
Sbjct: 1 MVLDINLFRVSKGGNPEKIKESQRRRYASTEVVDKVIELDKAWVSKDYEASQLSKELNQL 60
Query: 61 SKVIGEKMKAKEPVGDSS----------------------------TLPGNHLHPSVPVS 92
+K G +KAK P + S GN + +V V
Sbjct: 61 NKDFGAAVKAKSPTDELSKKIASNKQETERVKKEVGQLLAERNAVLNTIGNIVSDTVVVD 120
Query: 93 NNEDENGIVRTK--------GDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
NNED N +V T V K +HV L+T +D G ++G RGYFL G
Sbjct: 121 NNEDNNKVVYTNDAVIKANPSPNGVEKTLNHVTLMTNCRMMDCPRGVKISGNRGYFLTGY 180
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
L L+QYAL ++GY + TPFFM +E M QL FDE+LYKV G+G
Sbjct: 181 GALLNQALIQYALKFLTDRGYQAMQTPFFMEQEAMSCCCQLEDFDEQLYKVSGEG----- 235
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSW-----------LPEASLP-----------IR 242
+DKYLIATSEQP+CA H L S+ IR
Sbjct: 236 --------NDKYLIATSEQPLCAYHMGEVVNFSKQGQRVELTYNSIKTGKQEKKTLECIR 287
Query: 243 YLGVSTCFRQE--------------------------------DLTK------------- 257
Y G+STCFR+E D+ +
Sbjct: 288 YAGMSTCFRKEVGRHGHDTLGIFRIHQFEKIEQIVVCKEEDSWDMMEYMIDNCRAFFDSL 347
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQT 315
I YRVV IVSGALN+AAA K DLEA+FPGS +RELVSCSNC DYQSR L ++Y G+
Sbjct: 348 MIPYRVVIIVSGALNNAAAMKYDLEAYFPGSDTYRELVSCSNCTDYQSRSLDIKYQDGKD 407
Query: 316 KKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFV 362
KK +VH+LN+T AT R +C ++E +QT TG+R+P L+ +V
Sbjct: 408 KK------YVHLLNSTLSATERTLCCLVENYQTSTGIRVPVPLQSYV 448
>gi|440487436|gb|ELQ67225.1| seryl-tRNA synthetase [Magnaporthe oryzae P131]
Length = 478
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 180/460 (39%), Positives = 239/460 (51%), Gaps = 115/460 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL- 59
MVLD+ F TE+GG+PEK+R++Q+ R VE+VD++I R+ ++ A N N
Sbjct: 1 MVLDVTDFITERGGNPEKIRESQRRRHAPVEVVDEIIAMWDDHRRTQYAATQMNAQINDV 60
Query: 60 -------------CSKVIGEKM---KAKEPVGDSS-----------TLPGNHLHPSVPVS 92
S+ + EK+ KAK+ + DS+ T GN +H SVPVS
Sbjct: 61 QKKIGAKKKAKEDASEFLQEKIALEKAKKELIDSAAEKQKILDKKLTTIGNIVHDSVPVS 120
Query: 93 NNEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
+NED N I+RT +G T E R+ SH +++T +DG D + G G RGYFL+ V L
Sbjct: 121 DNEDNNEIIRTYCPEGLTVEKRECLSHHEVLTRLDGYDPDRGIKAVGHRGYFLRQWGVFL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
++ + L K + PL PFF+ K+ M + AQL QFDEELYKV+
Sbjct: 181 NQAIINFGLEFLSSKSFVPLQPPFFLLKDQMSKTAQLEQFDEELYKVV------------ 228
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---------------- 252
D DKYLIATSEQPI H + WL LP+RY G STCFR+
Sbjct: 229 -DGEADKYLIATSEQPISVYHANEWLLPQDLPLRYAGYSTCFRKEAGGHGRDVWGTFRVH 287
Query: 253 ---------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEA 283
E+ K++ YR+V IVSGALN+AAAKK DLEA
Sbjct: 288 QFEKVEQFCITEPEKSWEMFDEMIANSEEFYKALGLPYRIVAIVSGALNNAAAKKFDLEA 347
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFP G ++ELVSCSNC TKK E+VH LN+T AT+R +CA+L
Sbjct: 348 WFPFQGEYKELVSCSNC--------------TKK-----EYVHCLNSTLTATSRTMCALL 388
Query: 344 ETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPID 382
E +QTE G ++P+ LRK++P A E IPF K P D
Sbjct: 389 ENYQTEDGFKVPEPLRKYLPG-----APEFIPFTKELPKD 423
>gi|336372758|gb|EGO01097.1| hypothetical protein SERLA73DRAFT_179157 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385607|gb|EGO26754.1| hypothetical protein SERLADRAFT_464149 [Serpula lacrymans var.
lacrymans S7.9]
Length = 452
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 175/462 (37%), Positives = 234/462 (50%), Gaps = 100/462 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F KGG+ E++R++Q+ R ++VELVD+VI+ W + + + K N
Sbjct: 1 MTLDVTSFIDGKGGNSEEIRESQRKRGESVELVDEVIQMYADWVKMDFETNALRKNINAV 60
Query: 61 SKVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVS 92
K I K KAKEP + ++ GN + +VPVS
Sbjct: 61 QKDIAAKKKAKEPADELVAAKKELDAQVEARRREAKEFELRMRQKASTVGNIVGRNVPVS 120
Query: 93 NNEDENGIVRT----KGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
ED+N +RT + +V KK H +++ +D +D + GA +AG RGYFL
Sbjct: 121 QTEDDNVTIRTWHPAGPNEQVEKKTDIMPHHEVLLRLDAMDLDRGAKIAGHRGYFLTDDG 180
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
+ L ++ YAL ++GY + PF M K+VM + AQL QFDEELYKVI
Sbjct: 181 IDLNQAMIMYALDFLRKRGYKKIQPPFMMNKDVMAKTAQLDQFDEELYKVIASE------ 234
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE------DL-- 255
D+KYLIATSEQPI A H D W P+ LP+ Y G STCFR+E D+
Sbjct: 235 -------DEKYLIATSEQPISAFHSDEWFEDPKTQLPLLYAGYSTCFRKEAGSAGRDMWG 287
Query: 256 -------------------------------------TKSIAYRVVNIVSGALNHAAAKK 278
+ + YRVV IVSGALN AAA K
Sbjct: 288 IFRVHQFEKIEQFVLTAPEESWEMLDRMLGNSEAFYQSLGLPYRVVAIVSGALNLAAAMK 347
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLEAWFP GA++ELVSCSNC DYQSRRL VR G K ++ +VHMLN T CAT R
Sbjct: 348 YDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKSKDQQRKVYVHMLNGTLCATERA 407
Query: 339 ICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+C ++E +QT G+ IP+ LR Y+ +P+VK P
Sbjct: 408 LCCLVENYQTPDGLVIPEVLRP-----YMQGRDFLPWVKELP 444
>gi|84490065|ref|YP_448297.1| seryl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
gi|121721559|sp|Q2NEU9.1|SYS_METST RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|84373384|gb|ABC57654.1| SerS [Methanosphaera stadtmanae DSM 3091]
Length = 424
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 164/444 (36%), Positives = 236/444 (53%), Gaps = 96/444 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ LFR E P K+ ++K RF++ V+KVIE D WR+ +N KN S
Sbjct: 1 MLDIKLFREE----PNKIFDSEKKRFRDTINVEKVIEYDNLWREGLQNLNNLRSEKNKLS 56
Query: 62 KVIGEK----------MKAKEPVGDSSTLP-----------------GNHLHPSVPVSNN 94
K + K+K+ D L GN + +VPVS+
Sbjct: 57 KSFKQAKKDGNLEEVISKSKKVASDIKELEPKIEEYERIRDEYRYKVGNIIDENVPVSDT 116
Query: 95 EDENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
ED+N ++RT GD + + +HVDLI +IDG D++ + +AG R Y+LK + L + L
Sbjct: 117 EDDNEVIRTNGDFPSFDFEPLNHVDLINLIDGADTDTASQIAGSRFYYLKQDILFLNLAL 176
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+Q+AL++ +KGYTPL TPFF++ EV +E ++L +F+E LYKV E
Sbjct: 177 IQFALNELKDKGYTPLQTPFFIKSEVAEETSELGEFEETLYKV---------------EN 221
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------- 253
+D YLIAT+EQ + A+HR+ + LP+RY +STCFR+E
Sbjct: 222 EDLYLIATAEQTLAALHRNEIIDSEDLPLRYCALSTCFRKEAGSHGKDTLGIFRVHQFEK 281
Query: 254 --------------------DLTKSI------AYRVVNIVSGALNHAAAKKLDLEAWFPG 287
++T+ I Y++V IVS ALN AA K DLEAWFPG
Sbjct: 282 VEQFIYATPENSTLEHEKLLEVTEGIYQKLGLPYQIVAIVSSALNDNAAIKYDLEAWFPG 341
Query: 288 SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
SG +RELVSC+NC DYQ+R++ RYG+ + +I +H LN+TA AT R IC ILE +Q
Sbjct: 342 SGTYRELVSCTNCKDYQARKINTRYGKAGAGDAQI--LHTLNSTAIATERTICCILENYQ 399
Query: 348 TETG-VRIPDCLRKFVPAVYVNEA 370
E G ++IPD L ++ + EA
Sbjct: 400 QEDGSIKIPDVLIPYMNGKTIIEA 423
>gi|170094981|ref|XP_001878711.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646015|gb|EDR10261.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 452
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 172/462 (37%), Positives = 226/462 (48%), Gaps = 100/462 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F KGG+ E++R++Q+ R +VELVD++++ W + + + K N
Sbjct: 1 MTLDILSFIDNKGGNAEEIRESQRKRGHSVELVDEIVQMYADWVKLDFETNALRKKVNEV 60
Query: 61 SKVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVS 92
K I K KAKEP D + GN + + P+S
Sbjct: 61 QKEISAKKKAKEPADDLVAAKKEIDAQVEAKKKEAKEFEIKMRAKACTVGNIVGKNAPIS 120
Query: 93 NNEDENGIVRT---KGDTEVRKK----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
ED+N +RT G+T+ H +++ +D +D E GA +AG RGY+L
Sbjct: 121 LTEDDNTTLRTWDPLGETDDPAPRPGILPHHEVLLKLDAMDLERGAKIAGHRGYYLTNDG 180
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
V L L+ Y L + GY + PF M K+ M + AQL QFDEELYKVIG
Sbjct: 181 VDLNQALISYGLDFLRKHGYKKIQPPFMMNKDQMAKTAQLDQFDEELYKVIGSD------ 234
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE---------- 253
D+KYLIATSEQPI H D W P+ LPI+Y G STCFR+E
Sbjct: 235 -------DEKYLIATSEQPISGYHSDEWFESPDTQLPIKYAGYSTCFRKEAGSAGRDMWG 287
Query: 254 ----------------DLTKS-------------------IAYRVVNIVSGALNHAAAKK 278
D KS + YRVV IVSGALN AAA+K
Sbjct: 288 IFRVHQFEKVEQFVISDPEKSWEMLDVMIGNSEAFYQSLGLRYRVVGIVSGALNLAAAQK 347
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLEAWFP A++ELVSCSNC DYQSRRL +R G K + +VHMLN T CAT R
Sbjct: 348 CDLEAWFPFQRAYKELVSCSNCTDYQSRRLEIRCGLKNKDQTRKVYVHMLNGTLCATERA 407
Query: 339 ICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+C ++E +QT G+ IP+ LR Y+ IPF + P
Sbjct: 408 LCCLVENYQTPEGLVIPEVLRP-----YMQGRDFIPFTRELP 444
>gi|261190815|ref|XP_002621816.1| seryl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
gi|239590860|gb|EEQ73441.1| seryl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
Length = 487
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 174/466 (37%), Positives = 233/466 (50%), Gaps = 108/466 (23%)
Query: 5 LDLFRTEKGGDPEKV-------RKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFK 57
LD+ G PEK+ R+NQ+ R VE VD+VI R+ R++ +
Sbjct: 2 LDIADFVHGATPEKIAENQERLRENQRRRGAPVEAVDEVIALFKVARESRYEVTQIGEKI 61
Query: 58 NLCSKVIGEKMKAKEPVGD--------------SSTLP--------------GNHLHPSV 89
N K IG K K KE D + L GN++H V
Sbjct: 62 NKVQKEIGRKKKNKEDAADLIAEKTELEKQKKDADALATEKELLRDRKLASIGNYVHADV 121
Query: 90 PVSNNEDENGIVRT---KGDTEVRKKY--SHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
P S +E +N I+ T +G E + Y SH D++ +DG D + G + G RGY L
Sbjct: 122 PTSQDEADNAIISTWAPEGFKEEKPAYCLSHDDVLHRLDGFDQKRGTKIFGHRGYCLINY 181
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
+ L + LV Y L K YT P+FM K+ M + AQL QFDEELYKV
Sbjct: 182 GLLLNLALVNYGLEFLFSKKYTLNQPPYFMLKQYMAKTAQLEQFDEELYKV--------- 232
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------ 252
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+
Sbjct: 233 -TENEDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGI 291
Query: 253 ------------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKL 279
ED+ K+ + YRVV+IVSGALN+AA++K
Sbjct: 292 FRVHQFEKIEQFVMTKPEDSWDAFEDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKN 351
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE--------FVHMLNAT 331
DLEAWFP G ++ELVSCSNC DYQSR L +RY + KK +EK +VH LNAT
Sbjct: 352 DLEAWFPSQGTYKELVSCSNCTDYQSRALEIRY-RAKKDDEKDTRSDENKKVYVHALNAT 410
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
CAT R +C ILE +QTETG+ +P LRK++P + EIP+ K
Sbjct: 411 LCATERTLCCILENYQTETGIIVPKVLRKYIPG----QPTEIPYTK 452
>gi|239613234|gb|EEQ90221.1| seryl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
gi|327357489|gb|EGE86346.1| seryl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
Length = 487
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 174/466 (37%), Positives = 233/466 (50%), Gaps = 108/466 (23%)
Query: 5 LDLFRTEKGGDPEKV-------RKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFK 57
LD+ G PEK+ R+NQ+ R VE VD+VI R+ R++ +
Sbjct: 2 LDIADFVHGATPEKIAENQERLRENQRRRGAPVEAVDEVIALFKVARESRYEVTQIGEKI 61
Query: 58 NLCSKVIGEKMKAKEPVGD--------------SSTLP--------------GNHLHPSV 89
N K IG K K KE D + L GN++H V
Sbjct: 62 NKVQKEIGRKKKNKEDAADLIAEKTELEKQKKDADALATEKELLRDRKLASIGNYVHADV 121
Query: 90 PVSNNEDENGIVRT---KGDTEVRKKY--SHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
P S +E +N I+ T +G E + Y SH D++ +DG D + G + G RGY L
Sbjct: 122 PTSQDEADNAIISTWAPEGFKEEKPAYCLSHDDVLHRLDGFDQKRGTKIFGHRGYCLINY 181
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
+ L + LV Y L K YT P+FM K+ M + AQL QFDEELYKV
Sbjct: 182 GLLLNLALVNYGLEFLFSKKYTLNQPPYFMLKQYMAKTAQLEQFDEELYKV--------- 232
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------ 252
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+
Sbjct: 233 -TENEDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGI 291
Query: 253 ------------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKL 279
ED+ K+ + YRVV+IVSGALN+AA++K
Sbjct: 292 FRVHQFEKIEQFVMTKPEDSWDAFEDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKN 351
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE--------FVHMLNAT 331
DLEAWFP G ++ELVSCSNC DYQSR L +RY + KK +EK +VH LNAT
Sbjct: 352 DLEAWFPSQGTYKELVSCSNCTDYQSRALEIRY-RAKKDDEKDTRSDENKKVYVHALNAT 410
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
CAT R +C ILE +QTETG+ +P LRK++P + EIP+ K
Sbjct: 411 LCATERTLCCILENYQTETGIIVPKVLRKYIPG----QPTEIPYTK 452
>gi|302682558|ref|XP_003030960.1| hypothetical protein SCHCODRAFT_77152 [Schizophyllum commune H4-8]
gi|300104652|gb|EFI96057.1| hypothetical protein SCHCODRAFT_77152 [Schizophyllum commune H4-8]
Length = 453
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 178/462 (38%), Positives = 228/462 (49%), Gaps = 100/462 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F KGG+ E++R++Q+ R +VELVD+VI+ W + +A+N K N
Sbjct: 1 MTLDVLHFIDSKGGNAEEIRESQRKRGHSVELVDEVIQMYQDWVKIDFEANNLAKQVNAL 60
Query: 61 SKVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVS 92
K IG+K KAKE D + GN + +VPVS
Sbjct: 61 QKEIGQKKKAKENADDLVAQKKELDQKVAAKKQESKDFEILLKKKARGVGNIVGKNVPVS 120
Query: 93 NNEDENGIVRT---KGDTEVRKK----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
ED+N VRT G+T+ +H +++ +D +D E G V+G RGY+L G
Sbjct: 121 QTEDDNVTVRTWFPSGETDEPPARPGILAHHEVLLRLDAMDLERGVKVSGHRGYYLTGDG 180
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
V L L+ Y L K Y + PFFM KE M + AQL QFDEELYKVI
Sbjct: 181 VDLNQALISYGLDFLRSKSYRKIQPPFFMNKEQMAKTAQLDQFDEELYKVIADD------ 234
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE---------- 253
D+KYLIATSEQPI +H D W PE LP Y G STCFR+E
Sbjct: 235 -------DEKYLIATSEQPISVLHSDEWFESPETQLPRMYAGYSTCFRKEAGAAGRDMWG 287
Query: 254 ----------------DLTKS-------------------IAYRVVNIVSGALNHAAAKK 278
D KS + YRVV IVSGALN AAA+K
Sbjct: 288 IFRVHQFEKVEQFCITDPAKSWEMFDTMIGNSEEFYQSLGLRYRVVAIVSGALNLAAAQK 347
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLEA+FP ++ELVSCSNC DYQ+RRL VR G K+ + +VHMLN T CAT R
Sbjct: 348 YDLEAYFPFQKEYKELVSCSNCTDYQARRLEVRCGLKKQDQTRKVYVHMLNGTLCATERA 407
Query: 339 ICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+C ++E QT G+ IP LR Y+ +PFV+ P
Sbjct: 408 LCCLVENWQTPEGLVIPPPLRP-----YMQGREFLPFVRELP 444
>gi|328856864|gb|EGG05983.1| hypothetical protein MELLADRAFT_77928 [Melampsora larici-populina
98AG31]
Length = 451
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 174/463 (37%), Positives = 232/463 (50%), Gaps = 100/463 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRF--KNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+++L L +T KGG+PE V+ +Q+ R K ELVD+V+ W + + N
Sbjct: 1 MIELQLLQTGKGGNPESVKASQRKRGGEKAAELVDEVLNLYKNWTKVGFQLREIRTEANS 60
Query: 60 CSKVIGEKMKAKEPVGDS-----------------------STLP------GNHLHPSVP 90
K IGE KAK G TL GN +H SVP
Sbjct: 61 IKKKIGEAKKAKTEPGPELWEAKEKLDNEIKRLEKEESDAEVTLKARAGNIGNIVHESVP 120
Query: 91 VSNNEDENGIVRT------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
VS +ED+N I+RT T+ SH ++ ++ +D E G VAG RG+FL
Sbjct: 121 VSMSEDDNTIIRTWTPTPNSPPTKDPALLSHDVVMNRLNMIDQERGIKVAGHRGFFLVED 180
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
V L ++ Y L ++ Y + TPF MRK +M + AQL +FDE LY + G G +
Sbjct: 181 GVDLNQAMINYGLDFLRQRKYKKMMTPFMMRKSMMAKTAQLEEFDEALYGLTGDGGE--- 237
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE--------- 253
DDKYLIATSEQP+ A+H D W P+ LP+RY G STCFR+E
Sbjct: 238 --------DDKYLIATSEQPLSALHADEWFENPKEQLPLRYAGYSTCFRKEAGSHGRDTW 289
Query: 254 -----------------DLTKS-------------------IAYRVVNIVSGALNHAAAK 277
D + S ++YRVV IVSGALN+AAAK
Sbjct: 290 GIFRVHQFEKIEQFCVTDPSSSWEMFEEMVASSEAFYQSLGLSYRVVGIVSGALNNAAAK 349
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K+DLEAWFP G ++ELVS SNC DYQSR L VR G K+ + + +VHMLN T CAT R
Sbjct: 350 KIDLEAWFPSMGEYKELVSVSNCTDYQSRSLEVRCGIKKQGDTQKVYVHMLNGTLCATER 409
Query: 338 VICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
+C ++E +QT G+ IP+ L+ Y+ +PFVK AP
Sbjct: 410 ALCCLVENYQTPEGMNIPEVLQP-----YMRNRTFLPFVKEAP 447
>gi|392575481|gb|EIW68614.1| hypothetical protein TREMEDRAFT_71854 [Tremella mesenterica DSM
1558]
Length = 457
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 178/479 (37%), Positives = 238/479 (49%), Gaps = 113/479 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L + +KGG+PE V+++QK R +VELVD+VI + +Q +++++ + N
Sbjct: 1 MIDLQLLQPDKGGNPESVKESQKKRGASVELVDEVIALIAEHKQALYESESVRRDVNSLQ 60
Query: 62 KVIGEKMKAKEPVGDSS-------------------------------TLPGNHLHPSVP 90
K IG KAK GD+S TL GN +
Sbjct: 61 KEIGAIKKAK---GDASELLEKKAELDKKIADWTVKAGELMKKRDVRATLIGNIVDKDCH 117
Query: 91 VSNNEDENGIVRT-------KGDT----EVRKK----YSHVDLITMIDGVDSEAGAIVAG 135
VS ED+N I KG++ + K SH +++T + D+E GA ++G
Sbjct: 118 VSLTEDDNPIKAVWHPEPNHKGNSIPGLQAEDKTIDIISHHEVMTRLQAFDTERGAKISG 177
Query: 136 GRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV 195
RGYFL V L L+ Y L +K Y + PF M+KE+M + AQL FDE LYKV
Sbjct: 178 HRGYFLTNDGVDLNQALINYGLDFLRKKQYKKIMAPFMMKKEIMAQTAQLEDFDEALYKV 237
Query: 196 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-- 253
G + DDKYLIATSEQPI A+H D +L SLP+ Y G STCFR+E
Sbjct: 238 SG-------------DADDKYLIATSEQPISALHSDEFLEPKSLPLLYAGYSTCFRKEAG 284
Query: 254 ---------------------------------DL----------TKSIAYRVVNIVSGA 270
D+ + I YRVV IVSGA
Sbjct: 285 SHGKDTWGIFRVHQFEKVEQFVVCDPESSSKMLDMMVENSREFYESLEIPYRVVGIVSGA 344
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
LN+AA+ K DLEAWFP G ++ELVSCSNC DYQSR L VRYG KK EK FVHMLN
Sbjct: 345 LNNAASIKYDLEAWFPYQGEYKELVSCSNCTDYQSRSLNVRYG-YKKGGEKAAFVHMLNG 403
Query: 331 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
T CAT R +C ++E +QT G+RIP L+ Y+ +P+ P D +++
Sbjct: 404 TLCATERALCCLVENYQTPEGIRIPKVLQP-----YMQGRDFLPYTAELPKDSTSNRRK 457
>gi|302415006|ref|XP_003005335.1| seryl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
gi|261356404|gb|EEY18832.1| seryl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
Length = 451
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 174/464 (37%), Positives = 239/464 (51%), Gaps = 101/464 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD F E+GGDPEK+R++Q+ R VELVD+VI + R ++K FN
Sbjct: 1 MLDALDFIAERGGDPEKIRESQRQRGDPVELVDEVIALWQEARSEQYKVTQFNAQIGAVQ 60
Query: 62 KVIGEKMKAK----------------------------EPVGDSSTLPGNHLHPSVPVSN 93
K IG++ K K + + + + + GN++H SVP+SN
Sbjct: 61 KEIGQRRKNKVDDADLQVKKTDLQKQQKDQEAAAAEKQKELRNKTRIIGNYVHESVPISN 120
Query: 94 NEDENGIVRT-KGDTEVRKKY----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
ED+N ++RT K + K + SH D++ + G D G + G RGY L G L
Sbjct: 121 TEDDNKVIRTWKPEGRELKPFAAAVSHHDVLLKLGGYDPTRGVKLVGHRGYCLTGMGYFL 180
Query: 149 QVGL----VQYAL-SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
QY + +K GYTP P+F+ ++ M + AQL+QFDEELY+V +G+
Sbjct: 181 PTPFPMTPFQYEIQTKRPLAGYTPNQPPYFLDRDQMAKTAQLSQFDEELYRV-SEGKSTD 239
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------- 252
SA DKYLIATSEQP+ +H D WL LPI+Y G STCFR+
Sbjct: 240 GSA-------DKYLIATSEQPLSCLHADEWLQPGQLPIKYAGFSTCFRKEAGNHGRDAWG 292
Query: 253 --------------------------------EDLTKSIA--YRVVNIVSGALNHAAAKK 278
E+ KS+ Y+VV+IVSGALN++AAKK
Sbjct: 293 VFRVHQFEKVEQFVLCKPEDSWKFFDEMIATSEEFYKSLGLPYQVVSIVSGALNNSAAKK 352
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-----KIEFVHMLNATAC 333
DLEA+FP G ++ELVSCSNC DYQ+R L +RYG KK E K E+VH LNAT
Sbjct: 353 FDLEAYFPFQGEYKELVSCSNCTDYQTRELEIRYG-VKKAKEAPGSGKKEYVHALNATLT 411
Query: 334 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
A R +C +LE +QT G+ +P+ LRK++P + IPF K
Sbjct: 412 AAERTLCCVLENYQTAEGLNVPEVLRKYIPG----QPEFIPFQK 451
>gi|169862181|ref|XP_001837721.1| seryl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
gi|116501170|gb|EAU84065.1| seryl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
Length = 453
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 180/474 (37%), Positives = 237/474 (50%), Gaps = 104/474 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F KGG+ E++R++Q+ R +VELVD+VI+ W + + + K N
Sbjct: 1 MTLDILHFIDNKGGNAEEIRESQRKRGLSVELVDEVIQMYTDWVKMDFEINQLRKKVNDV 60
Query: 61 SKVIGEKMKAKEP----VGDSSTLP------------------------GNHLHPSVPVS 92
K I K KAKE V + ++ GN + +VPVS
Sbjct: 61 QKQISAKKKAKENADELVAEKKSIDAQVETKKKEAKDFEALMRQKACQVGNIVGKNVPVS 120
Query: 93 NNEDENGIVRTKGDTEVRKK-------YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
ED+N ++T T ++ +H +++ +D +D + GA VAG RGY+L
Sbjct: 121 LTEDDNVTIKTWDPTGNLEEPAPRPGILAHHEVLLRLDAMDLDRGAKVAGHRGYYLTNDG 180
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
V L L+ Y L +KGY + PFFM K+ M + AQL QFDEELYKVI
Sbjct: 181 VDLNQALISYGLDFLRKKGYKKIQPPFFMNKDQMAKTAQLDQFDEELYKVIASE------ 234
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE---------- 253
D+KYLIATSEQPI A H D W PE LPI+Y G STCFR+E
Sbjct: 235 -------DEKYLIATSEQPISAFHSDEWFESPETQLPIKYAGYSTCFRKEAGSAGRDMWG 287
Query: 254 ----------------DLTKS-------------------IAYRVVNIVSGALNHAAAKK 278
D KS + YRVV IVSGALN AAA+K
Sbjct: 288 IFRVHQFEKVEQFCITDPEKSWEMLDHMLNNSEEFYQSLGLRYRVVAIVSGALNLAAAQK 347
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLEA+FP A++ELVSCSNC DYQSRRL +R G K + +VHMLN T CAT R
Sbjct: 348 YDLEAYFPFQRAYKELVSCSNCTDYQSRRLEIRCGLRTKDQTRKVYVHMLNGTLCATERA 407
Query: 339 ICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 392
+C ++E +QT G+ IP+ LR Y+ +PFVK P + +QKKQ
Sbjct: 408 LCCLVENYQTPEGLVIPEPLRP-----YMQGRDFLPFVKELP----KGLQQKKQ 452
>gi|388851393|emb|CCF54978.1| probable serine-tRNA ligase, cytosolic [Ustilago hordei]
Length = 452
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 183/470 (38%), Positives = 242/470 (51%), Gaps = 100/470 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVI---------ENDL----------- 41
++DL L + +KGG+P+ V+ +QK R + ELVD+V+ + DL
Sbjct: 1 MIDLLLLQPDKGGNPQLVKDSQKKRNASEELVDQVLNLYKNWVSLQKDLDIARRDVNAVQ 60
Query: 42 ----KWRQFRHKAD-NFNKFKNLCSKVIGEK---MKAKEPVGDSSTLPGNHLHPSVPVSN 93
K R+ + AD K K L +KV K ++A++ + + GN + VP+SN
Sbjct: 61 AEITKLRKAKENADEQMTKKKELDAKVNELKPTVVQAEQEMKTKAMQIGNIVGDKVPISN 120
Query: 94 NEDENGIVRT----KGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
ED+N +R + +V KK SH +++ ++ D+E G ++G RG+FL G V
Sbjct: 121 TEDDNAEIRKWHPDGPNAQVEKKEGILSHHEVMYRLELFDTERGTKISGHRGFFLTGDGV 180
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ Y L +K Y + TPF MRKEVM + AQL QFDEELYKV G
Sbjct: 181 DLNQALINYGLDFLRKKNYKKIMTPFMMRKEVMAKTAQLDQFDEELYKVTG--------- 231
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED---------- 254
DE DDKYLIATSEQPI A+H D P LPIRY G STCFR+E
Sbjct: 232 ---DE-DDKYLIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEAGSHGKDTWGI 287
Query: 255 ---------------------------LTKS--------IAYRVVNIVSGALNHAAAKKL 279
LT S + Y VV IVSGALN+AAA K
Sbjct: 288 FRVHQFEKIEQFCITDPASSWDMLEQMLTNSEEFYQSLQLPYHVVAIVSGALNNAAAMKY 347
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLEAWFP G ++ELVSCSNC DYQSRRL VR G K + K FVHMLN T CAT R +
Sbjct: 348 DLEAWFPFQGEYKELVSCSNCTDYQSRRLDVRCGFKKPGDTKQTFVHMLNGTLCATERAL 407
Query: 340 CAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
C ++E QT G++IP L+ Y+ +P+V+ P + KK+
Sbjct: 408 CCVVENWQTPEGLKIPPPLQP-----YMGGRDFLPWVRELPKNTTSQKKK 452
>gi|307108989|gb|EFN57228.1| hypothetical protein CHLNCDRAFT_56101 [Chlorella variabilis]
Length = 424
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 176/457 (38%), Positives = 226/457 (49%), Gaps = 141/457 (30%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR E+GG+PE VR++Q+ RFK+V LVD+V+E D KWR+ R + D N N +
Sbjct: 1 MLDINLFREERGGNPEIVRESQRRRFKDVGLVDRVLELDAKWREARGQLDTLNMDFNKLN 60
Query: 62 KVIGEKMKAKEPVG---------------------------DSSTLP-GNHLHPSVPVSN 93
K IG KAK+ D++ +P GN + SVPV N
Sbjct: 61 KEIGALRKAKQDATALQERSKEMKARIKAQEELEKSLSEERDAAIVPIGNLVPDSVPVDN 120
Query: 94 NE--DENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
+E D N +V+ G+ + +HVDL+ ++D D EAGA
Sbjct: 121 DEARDNNAVVKEFGERRQEEGLLNHVDLVLLLDIADLEAGAA------------------ 162
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
K VM E AQL+QFDEELYKV G+GE
Sbjct: 163 -------------------------KPVMAECAQLSQFDEELYKVTGEGE---------- 187
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
+KYLIATSEQ +CA+HR W + LPI+Y+G STCFR+E
Sbjct: 188 ---EKYLIATSEQTLCAMHRRDWFDKQQLPIKYIGYSTCFRKEAGSHGRDTLGIFRVHQF 244
Query: 255 -------------------LTKSIA------------YRVVNIVSGALNHAAAKKLDLEA 283
L + IA YRVVNIVSGALN AAAKK DLEA
Sbjct: 245 EKVEQFVIASPHDDDSWVALEEMIANAEAFYQALGFPYRVVNIVSGALNDAAAKKYDLEA 304
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMN--EKIEFVHMLNATACATTRVICA 341
WFP S A+RELVSCSNC DYQ+RRL +R K K E+VHMLN T AT R +C
Sbjct: 305 WFPASRAYRELVSCSNCTDYQARRLDIRLRSAKGPGGESKKEYVHMLNGTLSATERTLCC 364
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+LE +QT GVR+P+ L+ F+ + IPF K
Sbjct: 365 LLENYQTADGVRVPEALQPFMMGIDF-----IPFKKA 396
>gi|253741836|gb|EES98697.1| Seryl-tRNA synthetase [Giardia intestinalis ATCC 50581]
Length = 457
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 231/467 (49%), Gaps = 124/467 (26%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFR KGG+PEK++++Q+ R+ ++E VDKVIE D W ++A ++ N
Sbjct: 1 MVLDINLFRVSKGGNPEKIKESQRRRYASIEAVDKVIELDKAWVAKDYEAGQLSRELNQL 60
Query: 61 SKVIGEKMKAKEPVGDSS----------------------------TLPGNHLHPSVPVS 92
+K G MKAK P + S GN + +V +
Sbjct: 61 NKDFGAAMKAKSPTDELSKKIATNKQETERVRKEVAQLLAERNAVLNTIGNIVCDAVVID 120
Query: 93 NNEDENGIVRTK--------GDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
+NED N +V T V K +HV L+T +D G ++G RGYFL G
Sbjct: 121 DNEDNNKVVYTNDAVIKANPSPNGVEKALNHVTLMTNCRMMDCPRGVKISGNRGYFLTGY 180
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
L L+QYAL +GY + TPFFM +E M QL FDE+LYKV G+G
Sbjct: 181 GALLNQALIQYALKFLTGRGYQAMQTPFFMEQEAMSCCCQLEDFDEQLYKVSGEG----- 235
Query: 205 SAPEKDELDDKYLIATSEQPICAVH-----------RDSWLPEASLP-----------IR 242
+DKYLIATSEQP+CA H + + L S+ IR
Sbjct: 236 --------NDKYLIATSEQPLCAYHMGEVINFSKQGQATELTYNSIKTGKQEKKTVECIR 287
Query: 243 YLGVSTCFRQE--------------------------------DLTK------------- 257
Y G+STCFR+E D+ +
Sbjct: 288 YAGMSTCFRKEVGRHGHDTLGIFRIHQFEKIEQIVVCKEEDSWDMMEYMIDNCRAFFDSL 347
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQT 315
I YRVV IVSGALN+AAA K DLEA+FPGS +RELVSCSNC DYQSR L ++Y G+
Sbjct: 348 MIPYRVVIIVSGALNNAAAMKYDLEAYFPGSDTYRELVSCSNCTDYQSRSLDIKYQDGKD 407
Query: 316 KKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFV 362
KK +VH+LN+T AT R +C ++E +QT TG+++P L+ +V
Sbjct: 408 KK------YVHLLNSTLSATERTLCCLVENYQTPTGIKVPAPLQDYV 448
>gi|401885309|gb|EJT49430.1| serine-tRNA ligase [Trichosporon asahii var. asahii CBS 2479]
gi|406695013|gb|EKC98328.1| serine-tRNA ligase [Trichosporon asahii var. asahii CBS 8904]
Length = 464
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 174/458 (37%), Positives = 231/458 (50%), Gaps = 108/458 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL F+T+KGG+PE VR++Q+ R VELVD+V+E + R +++ + + N
Sbjct: 1 MIDLAYFQTDKGGNPEIVRESQRKRGAKVELVDEVLELYNQARAAQYEVETERRAVNAVQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG KAK GD+S L GN + P+
Sbjct: 61 KEIGAIKKAK---GDASELLAKKAEHDKKIAELQAKANELNNARDRTAARIGNIVDPACH 117
Query: 91 VSNNEDENGI-------VRTKGDTE---VRKKYS----HVDLITMIDGVDSEAGAIVAGG 136
VS ED+N + KG++ V K + H +++ ++ D E G+ + G
Sbjct: 118 VSLTEDDNPVKAFWHPEPNHKGNSAPLTVEDKQTDILPHHEVMYRLEAFDGERGSKINGH 177
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVI 196
RGYFL V L L+ Y L +K Y + PF MRKE+M + AQL +FDE LYKV
Sbjct: 178 RGYFLTNDGVDLNQALINYGLDFLRKKQYKKIQAPFMMRKEIMAKTAQLEEFDEALYKVT 237
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--- 253
G GD E +D+YLIATSEQP+ +H D + SLPI+Y G STCFR+E
Sbjct: 238 G-----GDGVEE----NDRYLIATSEQPLSGMHSDENIEPKSLPIKYAGYSTCFRKEAGS 288
Query: 254 -----------------------DLTKS-------------------IAYRVVNIVSGAL 271
D +S I YRVVNIVSG L
Sbjct: 289 HGRDTWGIFRVHQFEKVEQFIICDPEESPAMLDSMVETAREFYESLEIPYRVVNIVSGGL 348
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AA+ K DLEAWFP G ++ELVSCSNC DYQSR L VR G + NEK FVHMLN T
Sbjct: 349 NNAASIKYDLEAWFPFQGEYKELVSCSNCTDYQSRSLNVRLGYKRAANEKAGFVHMLNGT 408
Query: 332 ACATTRVICAILETHQTETGVRIPDCL------RKFVP 363
CAT R +C ++E +QT G+RIP L R+F+P
Sbjct: 409 LCATERALCCLVENYQTPDGIRIPKALQPYMQGREFLP 446
>gi|343426728|emb|CBQ70256.1| probable serine-tRNA ligase, cytosolic [Sporisorium reilianum SRZ2]
Length = 452
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 178/470 (37%), Positives = 234/470 (49%), Gaps = 100/470 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD----NFNKFK 57
++DL L + +KGG+P+ V+ +QK R + ELVD+V+ W + D + N +
Sbjct: 1 MIDLLLLQPDKGGNPQLVKDSQKKRNASEELVDEVLALYKNWVSLQKDLDVARRDVNAVQ 60
Query: 58 NLCSKVIGEKMKAKEPVGDSSTLPG--NHLHPSV----------------------PVSN 93
+K+ K A E + + L N L PSV P+SN
Sbjct: 61 AEITKLRKAKENADEQMANKKQLDAKVNELKPSVVAAENEMKSKAMQIGNIVGDKVPISN 120
Query: 94 NEDENGIVRT----KGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
ED+N +R + +V KK SH +++ ++ D+E G ++G RG+FL G V
Sbjct: 121 TEDDNAELRKWHPDGPNAQVEKKDGILSHHEVMYRLELFDTERGTKISGHRGFFLTGDGV 180
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ Y L +K Y + TPF MRKEVM + AQL QFDEELYKV G
Sbjct: 181 DLNQALINYGLDFLRKKNYKKIMTPFMMRKEVMAKTAQLDQFDEELYKVTG--------- 231
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE----------- 253
DE DDKYLIATSEQPI A+H D P LPIRY G STCFR+E
Sbjct: 232 ---DE-DDKYLIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEAGSHGKDTWGI 287
Query: 254 ---------------------DLTK-------------SIAYRVVNIVSGALNHAAAKKL 279
D+ + + Y VV IVSGALN+AAA K
Sbjct: 288 FRVHQFEKVEQFCITDPASSWDMLEQMLANSEEFYQSLQLPYHVVAIVSGALNNAAAMKY 347
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLEAWFP G ++ELVSCSNC DYQSRRL VR G K + K FVHMLN T CAT R +
Sbjct: 348 DLEAWFPFQGEYKELVSCSNCTDYQSRRLDVRCGFKKPGDTKQTFVHMLNGTLCATERAL 407
Query: 340 CAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
C ++E QT G+RIP L+ Y+ +P+ + P + KK+
Sbjct: 408 CCVVENWQTPDGLRIPPPLQP-----YMGGRDFLPYTRELPKNTTSQKKK 452
>gi|225685085|gb|EEH23369.1| seryl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
Length = 478
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 224/424 (52%), Gaps = 86/424 (20%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHK----ADNFNKFKNLCSKVIGEKMKAKE 72
E++R+NQ+ R VE VD+V+ R+ R++ + NK K S +I EK++ +
Sbjct: 21 ERLRENQRRRGAPVEAVDEVVALFKIAREARYEVTQIGEKINKNKEDVSDLIVEKVELGK 80
Query: 73 PVGDSSTLP--------------GNHLHPSVPVSNNEDENGIVRT---KGDTEVRKKY-- 113
D+ L GN++H VP S NED+N I+ + +G E + +
Sbjct: 81 QKKDADALATEKELLRDQKLRTIGNYVHEDVPTSQNEDDNAILSSWAPEGFKEEKPAFCL 140
Query: 114 SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFF 173
SH D++ +DG D + G + G RGY L + L + LV Y L +K YT P+F
Sbjct: 141 SHDDILHRLDGFDQKRGTKIFGHRGYCLINYGLLLNLALVNYGLEFLFKKKYTLNQPPYF 200
Query: 174 MRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 233
M K+ M + AQL QFDEELYKV +D+ ++YLIATSEQP+ A+H W
Sbjct: 201 MLKQFMAKTAQLEQFDEELYKV----------TENEDKASERYLIATSEQPLSALHSGEW 250
Query: 234 LPEASLPIRYLGVSTCFRQE------------------------------------DLTK 257
L + LPI+Y G STC+R+E D+ K
Sbjct: 251 LHDTDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVHQFEKIEQFVITKPEDSWDAFKDMMK 310
Query: 258 S---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRL 308
+ + YRVV+IVSGALN+AA++K DLEAWFP G ++ELVSCSNC DYQSR L
Sbjct: 311 NSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWFPSQGTYKELVSCSNCTDYQSRAL 370
Query: 309 LVRYGQTKKMNE--------KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRK 360
+RY K + K +VH LNAT CAT R +C +LE +QTETG+ +P+ LRK
Sbjct: 371 EIRYRAKKDSADEKDCSDENKKTYVHALNATLCATERTLCCLLENYQTETGIIVPEVLRK 430
Query: 361 FVPA 364
++P
Sbjct: 431 YIPG 434
>gi|67604545|ref|XP_666622.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657650|gb|EAL36390.1| hypothetical protein Chro.80542 [Cryptosporidium hominis]
Length = 454
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 234/459 (50%), Gaps = 98/459 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M +D++ R EKGGD +K+ +++ R+K +E ++++++ D KWR+ K + K N
Sbjct: 1 MPIDINRIRVEKGGDYQKIAESEMARYKGLETLEELVKVDQKWREDMFKLEQSKKELNSI 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSV 89
SK I + +K K+P D L GN L P V
Sbjct: 61 SKEIAQ-IKKKDPKADCKDLQDKSVQLKKNLPIIEKKALETEEVRDKLWHKIGNILQPDV 119
Query: 90 PVSNNEDENGIVRTKGDTEVRK------KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
P+SN ED+N ++RT G+ K K H ++++ + DS GA +AG RGYFLK
Sbjct: 120 PISNTEDDNLVLRTWGEIPDIKVDGTPGKLHHNEIMSRLGFYDSVKGAELAGHRGYFLKD 179
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
V + + L YA+ ++KGY + P+FM++++M + A+L F+E LY +
Sbjct: 180 YGVIMSMALSHYAMGFLLKKGYLAIQPPYFMKRDLMGKAAELQDFEETLYHI-------- 231
Query: 204 DSAPEKDELDDK--YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
S K E+D +LIATSEQPI A+H + L + LPI+Y G+STCFR+E
Sbjct: 232 PSDNSKGEVDSNSLFLIATSEQPIAAMHHNVTLEDKDLPIKYAGISTCFRKEAGAHGKDT 291
Query: 254 ---------------------DLTK----------------SIAYRVVNIVSGALNHAAA 276
D K + YRV++IVSGALN AA+
Sbjct: 292 WGIFRIHQFEKVEQFCVTLPEDSQKIHEEMISISEEFYQSLELPYRVISIVSGALNDAAS 351
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
KK DLEAWFPG ++RELVSCSNC DYQSR L R G K+ + + H LN T CA
Sbjct: 352 KKYDLEAWFPGYNSYRELVSCSNCTDYQSRALECRLGFRKEGEREKHYCHFLNGTLCAIQ 411
Query: 337 RVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 375
R +C I+E +QT G+RIP L+ Y+N IPF
Sbjct: 412 RTMCCIVENYQTPDGLRIPKVLQP-----YMNGVEFIPF 445
>gi|66361666|ref|XP_627356.1| seryl-tRNA synthetase, cytoplasmic [Cryptosporidium parvum Iowa II]
gi|46228735|gb|EAK89605.1| seryl-tRNA synthetase, cytoplasmic [Cryptosporidium parvum Iowa II]
gi|323509279|dbj|BAJ77532.1| cgd8_4720 [Cryptosporidium parvum]
Length = 454
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 234/459 (50%), Gaps = 98/459 (21%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M +D++ R EKGGD +K+ +++ R+K +E ++++++ D KWR+ K + K N
Sbjct: 1 MPIDINRIRVEKGGDYQKIAESEMARYKGLETLEELVKVDQKWREDMFKLEQSKKELNSI 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSV 89
SK I + +K K+P D L GN L P V
Sbjct: 61 SKEIAQ-IKKKDPKADCKDLQDKSVQLKKNLPIIEKQALETEEVRDKLWHKIGNVLQPDV 119
Query: 90 PVSNNEDENGIVRTKGDTEVRK------KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
P+SN ED+N ++RT G+ K K H ++++ + DS GA +AG RGYFLK
Sbjct: 120 PISNTEDDNLVLRTWGEIPDIKVDGTPGKLHHNEIMSRLGFYDSVKGAELAGHRGYFLKD 179
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
V + + L YA+ ++KGY + P+FM++++M + A+L F+E LY +
Sbjct: 180 YGVIMSMALSHYAMGFLLKKGYLAIQPPYFMKRDLMGKAAELQDFEETLYHI-------- 231
Query: 204 DSAPEKDELDDK--YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
S K E+D +LIATSEQPI A+H + L + LPI+Y G+STCFR+E
Sbjct: 232 PSDNSKGEVDSNSLFLIATSEQPIAAMHHNVTLEDKDLPIKYAGISTCFRKEAGAHGKDT 291
Query: 254 ---------------------DLTK----------------SIAYRVVNIVSGALNHAAA 276
D K + YRV++IVSGALN AA+
Sbjct: 292 WGIFRIHQFEKVEQFCVTLPEDSQKIHEEMISISEEFYQSLELPYRVISIVSGALNDAAS 351
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
KK DLEAWFPG ++RELVSCSNC DYQSR L R G K+ + + H LN T CA
Sbjct: 352 KKYDLEAWFPGYNSYRELVSCSNCTDYQSRALECRLGFRKEGEREKHYCHFLNGTLCAIQ 411
Query: 337 RVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 375
R +C I+E +QT G+RIP L+ Y+N IPF
Sbjct: 412 RTMCCIVENYQTPDGLRIPKVLQP-----YMNGVEFIPF 445
>gi|443895576|dbj|GAC72922.1| seryl-trna synthetase [Pseudozyma antarctica T-34]
Length = 452
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 178/470 (37%), Positives = 232/470 (49%), Gaps = 100/470 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD----NFNKFK 57
++DL L + +KGG+P+ V+ +QK R + ELVD+V+ W + D + N +
Sbjct: 1 MIDLLLLQPDKGGNPQLVKDSQKKRNASEELVDEVLALYKNWVTLQKDLDVARRDVNAVQ 60
Query: 58 NLCSKVIGEKMKAKEPVGDSSTLPG--NHLHPSV----------------------PVSN 93
+K+ K A E + L N L PSV P+SN
Sbjct: 61 AEITKLRKAKENADEQMAKKKELDARVNQLKPSVVQAENEMKSKAMQIGNIVGDKVPISN 120
Query: 94 NEDENGIVRT----KGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
ED+N +R + +V KK SH +++ ++ D+E G ++G RG+FL G V
Sbjct: 121 TEDDNAEIRKWHPDGPNAQVEKKDGILSHHEVMYRLELFDTERGTKISGHRGFFLTGDGV 180
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ Y L K Y + TPF MRKEVM + AQL QFDEELYKV G
Sbjct: 181 DLNQALINYGLDFLRRKSYKKIMTPFMMRKEVMAKTAQLDQFDEELYKVTG--------- 231
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE----------- 253
DE DDKYLIATSEQPI A+H D P LPIRY G STCFR+E
Sbjct: 232 ---DE-DDKYLIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEAGSHGKDTWGI 287
Query: 254 ---------------DLTKS-------------------IAYRVVNIVSGALNHAAAKKL 279
D S + Y VV IVSGALN+AAA K
Sbjct: 288 FRVHQFEKVEQFCITDPASSWEMLEQMLANSEEFYQSLQLPYHVVAIVSGALNNAAAAKY 347
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLEAWFP G ++ELVSCSNC DYQSRRL VR G K + K FVHMLN T CAT R +
Sbjct: 348 DLEAWFPFQGEYKELVSCSNCTDYQSRRLDVRCGFKKPGDTKPTFVHMLNGTLCATERAL 407
Query: 340 CAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 389
C ++E QT G++IP L+ Y+ +P+++ P + KK+
Sbjct: 408 CCVVENWQTPDGLKIPPPLQP-----YMGGRDFLPYLRELPKNTTSQKKK 452
>gi|430813441|emb|CCJ29214.1| unnamed protein product [Pneumocystis jirovecii]
Length = 605
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 148/349 (42%), Positives = 196/349 (56%), Gaps = 68/349 (19%)
Query: 82 GNHLHPSVPVSNNEDENGIVRT---KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRG 138
GN +H SVPVSNNED+N ++RT + E + SH +++ +DG D E G +AG RG
Sbjct: 54 GNIVHDSVPVSNNEDDNEVIRTWFPENYIEKKGNLSHHEVLLRLDGYDPERGVKLAGHRG 113
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
YFLKG V L LV Y+L+ IEKGY L TP M K++M + A+L FDE+LYKVI
Sbjct: 114 YFLKGCGVLLSQALVNYSLNFLIEKGYIVLQTPHMMNKDIMSKTAELDDFDEQLYKVID- 172
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED-- 254
GD D+KYLIATSEQPI A H + W P LPI+Y G S+C+R+E
Sbjct: 173 ----GD--------DEKYLIATSEQPISAFHSNEWFETPNEQLPIKYAGYSSCYRREAGA 220
Query: 255 -------------------------------------------LTKSIAYRVVNIVSGAL 271
++ + YR+V+IVSGAL
Sbjct: 221 HGKDTWGIFRVHQFDKIEQFLITSPESSWIMFEEMISVAEEFYMSLKLPYRIVSIVSGAL 280
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AA+KK DLEAWFP ++ELVSCSNC DYQSR L +R G + +++ ++VH LNAT
Sbjct: 281 NNAASKKYDLEAWFPFQSEYKELVSCSNCTDYQSRNLEIRCGIKRLGDKEKKYVHCLNAT 340
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
CA TR +C ILE +QT G+ IP+ L+ Y+ +PF K+ P
Sbjct: 341 LCAVTRALCCILENYQTPDGLDIPEPLQS-----YMGGKTFLPFTKSLP 384
>gi|147801318|emb|CAN77028.1| hypothetical protein VITISV_015339 [Vitis vinifera]
Length = 466
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 156/382 (40%), Positives = 207/382 (54%), Gaps = 84/382 (21%)
Query: 57 KNLCSKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKY-SH 115
K L +K E +A + + GN +H SVPVSN+E N ++R+ G+ +V K +H
Sbjct: 120 KRLTAKKEAEVQEALATLNSKLEIIGNLVHDSVPVSNDEANNAVIRSWGEKKVEPKLKNH 179
Query: 116 VDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMR 175
V+L+ ++ D + GA +AGGRG++LKG V L L+ + L ++GYT L TPFFMR
Sbjct: 180 VELVELLGIADLKKGANIAGGRGFYLKGDGVRLNQALINFGLDFLEKRGYTALQTPFFMR 239
Query: 176 KEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLP 235
K++M + AQLAQFDEELYKV G+G DDKYLIAT+EQP+CA H D W+
Sbjct: 240 KDIMAKCAQLAQFDEELYKVTGEG-------------DDKYLIATAEQPLCAYHLDDWIH 286
Query: 236 EASLPIRYLGVSTCFRQ------------------------------------------- 252
+ LP+RY G S+CFR+
Sbjct: 287 PSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIK 346
Query: 253 --EDLTK--SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRL 308
ED K +I Y+VV IVSGALN AAAKK DLE WFP S +RELVSCSNC DYQSRRL
Sbjct: 347 NSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEGWFPASQTYRELVSCSNCTDYQSRRL 406
Query: 309 LVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVN 368
+RYGQ K+ L + A+ L+ +Q E GV +P+ LR F+
Sbjct: 407 EIRYGQKKQ----------LRGPSAAS-------LKNYQKEDGVEVPEPLRPFMGGKTF- 448
Query: 369 EAGEIPFVKTAPIDEEETKKQK 390
+PF +T+P E + KK K
Sbjct: 449 ----LPF-QTSPATEAKGKKSK 465
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR +KG +PE +R++Q+ R+ NV+LVD+VI D +WRQ + + +N K N +
Sbjct: 1 MLDINLFREDKGHNPEIIRESQRRRYANVDLVDEVIHLDKEWRQRQFEFENLRKEFNKIN 60
Query: 62 KVIGE 66
K + +
Sbjct: 61 KQVAK 65
>gi|221052754|ref|XP_002261100.1| seryl-trna synthetase [Plasmodium knowlesi strain H]
gi|194247104|emb|CAQ38288.1| seryl-trna synthetase, putative [Plasmodium knowlesi strain H]
Length = 597
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 246/552 (44%), Gaps = 180/552 (32%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFR EKGG+P+K++++++ RF + VDKVIE D KWR+ K + K NL
Sbjct: 51 MVLDINLFRKEKGGNPDKIKESERKRFHDETNVDKVIEYDEKWRKCIFKLEELKKNINLV 110
Query: 61 SKVIGEKMK----------------AKEPVGDSSTLP--------------GNHLHPSVP 90
+K IG K K KE + L GN L+ V
Sbjct: 111 NKEIGNKKKEDKNANVEDLKKKSLTMKEEIPQLQNLERDLLKQRNKYLSKVGNLLNKDVV 170
Query: 91 VSNNEDEN------------------------------------------------GIVR 102
+SN+ED N G+V
Sbjct: 171 ISNDEDNNKVVTTWGVCKRLEVITDESSEENKSGKGGSKDGGSNKREVPSSSSISGGVVH 230
Query: 103 TKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIE 162
E +K Y H DL+ I G + + G VAG RGY+L G L ++QYA++ +
Sbjct: 231 PNSSIEGKKYYYHFDLLRKIGGANFKKGIQVAGHRGYYLTGAGFLLHNAILQYAINFLVS 290
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV------------IGKGEKVGDSAPEKD 210
K YTP+Y PFFM+K +M+E A+L F+E LYK+ G V + + D
Sbjct: 291 KNYTPVYPPFFMKKNIMEECAELDDFEETLYKIASSGGNSTATTGTASGAPVSKNLNQND 350
Query: 211 EL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DL------- 255
EL DD +LIATSEQP+CA+H+D + LP++Y GVS+CFR+E D+
Sbjct: 351 ELSRDDLFLIATSEQPLCALHKDETIESKYLPLKYAGVSSCFRKEAGAHGKDIRGILRVH 410
Query: 256 --------------------------------TKSIAYRVVNIVSGALNHAAAKKLDLEA 283
+ +I YR+V+IVSGALN+AAA K DLE
Sbjct: 411 QFDKIEQFCLSLPQTSSKVHKQMMKTCEEFYQSLNIPYRIVSIVSGALNNAAAIKYDLEG 470
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRY------------GQTKKMN------------ 319
+FP S +RELVSCSNC DYQS L V+Y + KK N
Sbjct: 471 YFPSSNQYRELVSCSNCTDYQSNNLNVKYVDSSVRITDVKEDRKKKENTGDHQDDDDDDE 530
Query: 320 --------------EKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 365
E VH+LN T A R +C +LE +Q G+ +P+ LR
Sbjct: 531 IGSDHEEFLKNFHTESRNNVHLLNGTMVAAQRFLCCLLENYQNGEGIVVPEKLRP----- 585
Query: 366 YVNEAGEIPFVK 377
Y+N IPF++
Sbjct: 586 YMNNVDFIPFIE 597
>gi|295657633|ref|XP_002789383.1| seryl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283867|gb|EEH39433.1| seryl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 488
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 225/434 (51%), Gaps = 96/434 (22%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG----------- 65
E++R+NQ+ R +VE VD+V+ R+ R++ + N K IG
Sbjct: 21 ERLRENQRRRGASVEAVDEVVALFKIARETRYEVTQIGEKINKVQKEIGKKKKNKEDASD 80
Query: 66 ---EKMKAKEPVGDSSTLP--------------GNHLHPSVPVSNNEDENGIVRT---KG 105
EK++ ++ D+ L GN++H VP S NED+N I+ + +G
Sbjct: 81 LIAEKVELEKQKKDADALATEKELLRDQKLRTIGNYVHEDVPTSQNEDDNAILSSWAPEG 140
Query: 106 DTEVRKKY--SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
E + + SH D++ +DG+D + G + G RGY L + L + LV Y L +K
Sbjct: 141 FKEEKPAFCLSHDDILHRLDGLDQKRGTKIFGHRGYCLINYGLLLNLALVNYGLEFLFKK 200
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
YT P+FM K+ M + AQL QFDEELYKV +D+ ++YLIATSEQ
Sbjct: 201 KYTLNQPPYFMLKQFMAKTAQLEQFDEELYKV----------TENEDKASERYLIATSEQ 250
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------------------ 253
P+ A+H WL + LPI+Y G STC+R+E
Sbjct: 251 PLSALHSGEWLHDTDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVHQFEKIEQFVITKPED 310
Query: 254 ------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
D+ K+ + YRVV+IVSGALN+AA++K DLEAWFP G ++ELVSCS
Sbjct: 311 SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWFPSQGTYKELVSCS 370
Query: 299 NCLDYQSRRLLVRYGQTKKMNE--------KIEFVHMLNATACATTRVICAILETHQTET 350
NC DYQSR L +RY K + K +VH LNAT CAT R +C +LE +QTET
Sbjct: 371 NCTDYQSRALEIRYRAKKDSADEKDCSDENKKTYVHALNATLCATERTLCCLLENYQTET 430
Query: 351 GVRIPDCLRKFVPA 364
G+ +P+ LRK++P
Sbjct: 431 GIIVPEVLRKYIPG 444
>gi|119576774|gb|EAW56370.1| seryl-tRNA synthetase, isoform CRA_f [Homo sapiens]
Length = 421
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/253 (54%), Positives = 165/253 (65%), Gaps = 54/253 (21%)
Query: 194 KVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQE
Sbjct: 156 EVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQE 211
Query: 254 ---------------------------------------------DLTKS--IAYRVVNI 266
+ +S I Y +VNI
Sbjct: 212 VGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNI 271
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVH 326
VSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM +K+EFVH
Sbjct: 272 VSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVH 331
Query: 327 MLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 386
MLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +
Sbjct: 332 MLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPS 388
Query: 387 KKQKKQKEGMKKK 399
KKQKKQ EG KKK
Sbjct: 389 KKQKKQHEGSKKK 401
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%), Gaps = 7/92 (7%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF-------RHKADNF 53
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+F R +ADN
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRFLDSLFLGRFRADNL 60
Query: 54 NKFKNLCSKVIGEKMKAKEPVGDSSTLPGNHL 85
NK KNLCSK IGEKMK KEPVGD ++P N L
Sbjct: 61 NKLKNLCSKTIGEKMKKKEPVGDDESVPENVL 92
>gi|225562259|gb|EEH10539.1| seryl-tRNA synthetase [Ajellomyces capsulatus G186AR]
Length = 489
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 169/468 (36%), Positives = 234/468 (50%), Gaps = 110/468 (23%)
Query: 5 LDLFRTEKGGDPEKV-------RKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFK 57
LD+ G PEK+ ++NQ+ R VE +D+VI R+ R+ +
Sbjct: 2 LDVADFVHGATPEKITENRERLKENQRRRGAPVEAIDEVIALFKAAREARYDVTQIGEKI 61
Query: 58 NLCSKVIGEKMKAKEPVGD-----------------SSTLP-----------GNHLHPSV 89
N K IG+K K KE D ++T GN++H V
Sbjct: 62 NKVQKEIGKKKKNKEDAADLIAEKTELEKQKKDADAAATEKELLRDRKLASIGNYVHEDV 121
Query: 90 PVSNNEDENGIVRTKGDTEVRKK-----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
P S +E +N I+ T +++ SH D++ +DG D + G + G RGY L
Sbjct: 122 PTSQDEADNAILSTWAPEWFKEEKPAYCLSHDDVLHRLDGFDQKRGTKIFGHRGYCLINY 181
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
+ L + LV Y L K YT P+FM K+ M + AQL QFDEELYKV
Sbjct: 182 GLLLNLALVNYGLEFLFRKKYTLNQPPYFMLKQFMAKTAQLEQFDEELYKV--------- 232
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------- 253
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E
Sbjct: 233 -TENEDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGI 291
Query: 254 -------------------------DLTKS---------IAYRVVNIVSGALNHAAAKKL 279
D+ K+ + YRVV+IVSGALN+AA++K
Sbjct: 292 FRVHQFEKIEQFVMTKPEDSWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKN 351
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM----------NEKIEFVHMLN 329
DLEAWFP G ++ELVSCSNC DYQ+R L +RY Q K + N+KI +VH LN
Sbjct: 352 DLEAWFPSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGTDENKKI-YVHALN 410
Query: 330 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
AT CAT R +C ILE +QTETG+ +P+ LRK++P + EIP+ K
Sbjct: 411 ATLCATERTLCCILENYQTETGIIVPEVLRKYIPG----QPKEIPYTK 454
>gi|226294398|gb|EEH49818.1| seryl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
Length = 488
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 223/434 (51%), Gaps = 96/434 (22%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPVGD 76
E++R+NQ+ R VE VD+V+ R+ R++ + N K IG+K K KE V D
Sbjct: 21 ERLRENQRRRGAPVEAVDEVVALFKIAREARYEVTQIGEKINKVQKEIGKKKKNKEDVSD 80
Query: 77 --------------SSTLP--------------GNHLHPSVPVSNNEDENGIVRT---KG 105
+ L GN++H VP S NED+N I+ + +G
Sbjct: 81 LIAEKVELGKQKKDADALATEKELLRDQKLRTIGNYVHEDVPTSQNEDDNAILSSWAPEG 140
Query: 106 DTEVRKKY--SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
E + + SH D++ +DG D + G + G RGY L + L + LV Y L +K
Sbjct: 141 FKEEKPAFCLSHDDILHRLDGFDQKRGTKIFGHRGYCLINYGLLLNLALVNYGLEFLFKK 200
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
YT P+FM K+ M + AQL QFDEELYKV +D+ ++YLIATSEQ
Sbjct: 201 KYTLNQPPYFMLKQFMAKTAQLEQFDEELYKV----------TENEDKASERYLIATSEQ 250
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------------------ 253
P+ A+H WL + LPI+Y G STC+R+E
Sbjct: 251 PLSALHSGEWLHDTDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVHQFEKIEQFVITKPED 310
Query: 254 ------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
D+ K+ + YRVV+IVSGALN+AA++K DLEAWFP G ++ELVSCS
Sbjct: 311 SWDSFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWFPSQGTYKELVSCS 370
Query: 299 NCLDYQSRRLLVRYGQTKKMNE--------KIEFVHMLNATACATTRVICAILETHQTET 350
NC DYQSR L +RY K + K +VH LNAT CAT R +C +LE +QTET
Sbjct: 371 NCTDYQSRALEIRYRAKKDSADEKDCSDENKKTYVHALNATLCATERTLCCLLENYQTET 430
Query: 351 GVRIPDCLRKFVPA 364
G+ +P+ LRK++P
Sbjct: 431 GIIVPEVLRKYIPG 444
>gi|189189974|ref|XP_001931326.1| seryl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972932|gb|EDU40431.1| seryl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 476
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/481 (35%), Positives = 239/481 (49%), Gaps = 112/481 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVI---ENDLKWR-------------- 44
+LD++ F E+GG PEK+R++QK R VE+VD++I E W+
Sbjct: 1 MLDINDFIKERGGHPEKIRESQKKRCAPVEIVDEIIADFEGKKNWKLAYIAILTYTMYRP 60
Query: 45 ---QFRHKADNFNKFKNL-----------CSKVIGEK--MKAKEPVGDSSTLP------- 81
R + F N+ ++++ EK ++A++ D+
Sbjct: 61 PSHTIRCNTNTFETQTNILHLSEKKNKEDATELLEEKKRLEAEKKEKDAEAAEKLAKLHA 120
Query: 82 -----GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGA 131
GN+++ VPVS+NED N + +T + ++ H ++ ++G D E G
Sbjct: 121 KAKSVGNYVYKDVPVSDNEDNNAVQKTWAPEGRKAEFKADGIPHHGVLARLNGYDPERGT 180
Query: 132 IVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEE 191
+ G RGY L G V L L+ Y L KG+TP PFFM ++ M + AQL+ FDEE
Sbjct: 181 KIVGHRGYCLTGYGVFLNQALINYGLEFLFSKGFTPNQPPFFMLRDQMAKTAQLSDFDEE 240
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
LYKV +K PE DKYLIATSEQPI A+H + WL LPI+Y G ST FR
Sbjct: 241 LYKVTESKDK-----PET----DKYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFR 291
Query: 252 Q-------------------------------------------EDLTKSIA--YRVVNI 266
+ E+ +S+ Y+VV I
Sbjct: 292 KEAGSHGKDAWGIFRIHQFEKVEQFLLTHPEKSWEAFDEMLANSEEFYQSLGLPYQVVAI 351
Query: 267 VSGALNHAAAKKLDLEAWFP--GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEF 324
VSGALN+AA+ K DLEAWFP G G ++ELVS SNC DYQ+R L +R+G K + E+
Sbjct: 352 VSGALNNAASMKRDLEAWFPVTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEY 411
Query: 325 VHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK--TAPID 382
VH LN T CAT R +C ILE +QT G +P+ LRK++P + +PFVK AP D
Sbjct: 412 VHALNGTLCATERTLCCILENYQTPEGFTVPEVLRKYIPG----QPEFLPFVKEWKAPKD 467
Query: 383 E 383
+
Sbjct: 468 D 468
>gi|389582246|dbj|GAB64801.1| seryl-tRNA synthetase [Plasmodium cynomolgi strain B]
Length = 544
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 247/549 (44%), Gaps = 177/549 (32%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFR EKGG+P+K++++++ RF + VDKVIE D KWR+ K + K NL
Sbjct: 1 MVLDINLFRKEKGGNPDKIKESERKRFHDETNVDKVIEYDEKWRKCIFKLEELKKNINLV 60
Query: 61 SKVIGEKMKA---------KEPVGDSSTLP---------GNHLHPSVPVSNNEDENGIVR 102
+K IG K K K+ + L GN LH V SN+ED N +V
Sbjct: 61 NKEIGNKKKEDKNANVEDLKKKNQERDLLKQRNRYLSKVGNLLHKDVVTSNDEDNNKVVT 120
Query: 103 T---------------------KGDT--------EV---------------------RKK 112
T KGD+ EV +K
Sbjct: 121 TWGVCKRLEVTTDETSEGNKGSKGDSKDGGSNKREVPTSSSNGGAVHPNGGIVGSGGKKY 180
Query: 113 YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPF 172
Y H DL+ I G + + G VAG RGY+L G L ++QYA++ + K YTP+Y PF
Sbjct: 181 YYHFDLLRKIGGANFKKGIQVAGHRGYYLTGAGFLLHNAILQYAINFLVNKNYTPVYPPF 240
Query: 173 FMRKEVMQEVAQLAQFDEELYKV-------------IGKGEKVGDSAPEKDELDDKYLIA 219
FM+K +M+E A+L F+E LY+V G V + E+ DD +LIA
Sbjct: 241 FMKKNIMEECAELDDFEETLYRVASSGGSSSTATTGTTSGASVNRTQNEELNRDDLFLIA 300
Query: 220 TSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------------------- 253
TSEQP+CA+H+D + LP++Y GVS+CFR+E
Sbjct: 301 TSEQPLCALHKDETIESKYLPLKYAGVSSCFRKEAGAHGKDIRGILRVHQFDKIEQFCVT 360
Query: 254 ----------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFREL 294
++ K+ I YR+V+IVSGALN+AAA K DLE +FP S +REL
Sbjct: 361 LPQTSNKVHKEMMKTCEEFYQSLNIPYRIVSIVSGALNNAAAIKYDLEGYFPSSNQYREL 420
Query: 295 VSCSNCLDYQSRRLLVRY---------------GQTKKMN-------------------- 319
VSCSNC DYQS L V+Y G K N
Sbjct: 421 VSCSNCTDYQSNNLNVKYVDSNVKISVSDVKGEGSKKGSNQGDQKGDQKGDRNDYDEVGS 480
Query: 320 -----------EKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVN 368
E VH+LN T A R +C +LE +Q G+ +P+ LR Y+N
Sbjct: 481 DHEEFLKHFQTESRNNVHLLNGTMVAAQRFLCCLLENYQNGEGIVVPEKLRP-----YMN 535
Query: 369 EAGEIPFVK 377
IPF++
Sbjct: 536 NVEFIPFIE 544
>gi|325091741|gb|EGC45051.1| seryl-tRNA synthetase [Ajellomyces capsulatus H88]
Length = 481
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/343 (40%), Positives = 189/343 (55%), Gaps = 71/343 (20%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKK-----YSHVDLITMIDGVDSEAGAIVAGG 136
GN++H VP S +E +N I+ T +++ SH D++ +DG D + G + G
Sbjct: 106 GNYVHEDVPTSQDEADNAILSTWAPEWFKEEKPAYCLSHDDVLHRLDGFDQKRGTKIFGH 165
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVI 196
RGY L + L + LV Y L K YT P+FM K+ M + AQL QFDEELYKV
Sbjct: 166 RGYCLVNYGLLLNLALVNYGLEFLFGKKYTLNQPPYFMLKQFMAKTAQLEQFDEELYKV- 224
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--- 253
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E
Sbjct: 225 ---------TENEDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGS 275
Query: 254 ---------------------------------DLTKS---------IAYRVVNIVSGAL 271
D+ K+ + YRVV+IVSGAL
Sbjct: 276 HGKEVMGIFRVHQFEKIEQFVMTKPEDSWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGAL 335
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM----------NEK 321
N+AA++K DLEAWFP G ++ELVSCSNC DYQ+R L +RY Q K + N+K
Sbjct: 336 NNAASRKNDLEAWFPSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGTDENKK 395
Query: 322 IEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPA 364
I +VH LNAT CAT R +C ILE +QTETG+ +P+ LRK++P
Sbjct: 396 I-YVHALNATLCATERTLCCILENYQTETGIIVPEVLRKYIPG 437
>gi|240277340|gb|EER40849.1| seryl-tRNA synthetase [Ajellomyces capsulatus H143]
Length = 463
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 223/441 (50%), Gaps = 104/441 (23%)
Query: 5 LDLFRTEKGGDPEKV-------RKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFK 57
LD+ G PEK+ ++NQ+ R VE +D++I K + AD
Sbjct: 2 LDIADFVHGATPEKITENQERLKENQRRRGAPVEAIDEIIAL-FKVAREEDAAD------ 54
Query: 58 NLCSKVIGEKMKAKEPVGDSSTLP--------------GNHLHPSVPVSNNEDENGIVRT 103
+I EK + ++ D+ GN++H VP S +E +N I+ T
Sbjct: 55 -----LIAEKTELEKQKKDADAAATEKELLRDRKLASIGNYVHEDVPTSQDEADNAILST 109
Query: 104 KGDTEVRKK-----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS 158
+++ SH D++ +DG D + G + G RGY L + L + LV Y L
Sbjct: 110 WAPEWFKEEKPAYCLSHDDVLHRLDGFDQKRGTKIFGHRGYCLVNYGLLLNLALVNYGLE 169
Query: 159 KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLI 218
K YT P+FM K+ M + AQL QFDEELYKV +D+ ++YLI
Sbjct: 170 FLFGKKYTLNQPPYFMLKQFMAKTAQLEQFDEELYKV----------TENEDKASERYLI 219
Query: 219 ATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------------- 253
ATSEQP+ A+H WL ++ LPI+Y G STC+R+E
Sbjct: 220 ATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVHQFEKIEQFVM 279
Query: 254 -----------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRE 293
D+ K+ + YRVV+IVSGALN+AA++K DLEAWFP G ++E
Sbjct: 280 TKPEDSWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWFPSQGKYKE 339
Query: 294 LVSCSNCLDYQSRRLLVRYGQTKKM----------NEKIEFVHMLNATACATTRVICAIL 343
LVSCSNC DYQ+R L +RY Q K + N+KI +VH LNAT CAT R +C IL
Sbjct: 340 LVSCSNCTDYQTRALEIRYRQKKDLADEKESGTDENKKI-YVHALNATLCATERTLCCIL 398
Query: 344 ETHQTETGVRIPDCLRKFVPA 364
E +QTETG+ +P+ LRK++P
Sbjct: 399 ENYQTETGIIVPEVLRKYIPG 419
>gi|123463833|ref|XP_001317013.1| seryl-tRNA synthetase family protein [Trichomonas vaginalis G3]
gi|121899736|gb|EAY04790.1| seryl-tRNA synthetase family protein [Trichomonas vaginalis G3]
Length = 501
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 155/446 (34%), Positives = 222/446 (49%), Gaps = 88/446 (19%)
Query: 3 LDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQ-FRHKADNF-------- 53
+D+ FR + + + R NQK R + EL+D+++++D ++R + AD
Sbjct: 17 VDIKNFRGKTDAELQVWRDNQKKRNRPPELIDQIVKDDEEYRAALKAVADTMKEKNQAQA 76
Query: 54 -------------------NKFKNLCSKVIGEKMKAKE---PVGDSSTLPGNHLHPSVPV 91
K + L K+ + K E V + G + P VPV
Sbjct: 77 SLKPKGGVKLSPEEMEAVKEKCRQLAQKITELEAKRDELFAKVEKELSTVGVMIEPEVPV 136
Query: 92 SNNEDENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
S +E N ++ G E+ H +L+ MIDG + E GA VAG RGY+LKG A+ L
Sbjct: 137 SLDEANNKVIMQCGKIPEIPNFKPHNELLAMIDGYEPERGARVAGHRGYYLKGMALKLNQ 196
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L +Y L GYT ++TPFFM+ EVM V QL F E LY + +P D
Sbjct: 197 ALFRYGLDFLQAHGYTAIHTPFFMKSEVMARVCQLEDFQETLYHI---------DSPTND 247
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD +LIATSEQ +C H + L ++ LP +Y G S+CFR+E
Sbjct: 248 PKDDMFLIATSEQTLCGYHLNESLDDSQLPKKYCGFSSCFRKEAGASGKDNWGIFRVHQF 307
Query: 254 ----------------------------DLTKSIA--YRVVNIVSGALNHAAAKKLDLEA 283
+ KS+ +R V +VSG LN++ A+K+D+EA
Sbjct: 308 EKVEQFCITSPHNGESQKMHEQMVHNSCEFIKSLGLPFRAVLVVSGELNYSTARKVDIEA 367
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFP +RELVS SNC D+QSR+L +RYG K + + E+VHMLNAT CAT R +C IL
Sbjct: 368 WFPSYNQYRELVSASNCKDFQSRKLDIRYGHGKNKDGEKEYVHMLNATLCATERTLCCIL 427
Query: 344 ETHQTETGVRIPDCLRKFVPAVYVNE 369
E +QT TG+RIP L+ ++ + +NE
Sbjct: 428 ENYQTPTGIRIPKVLQPYMRELMINE 453
>gi|209876085|ref|XP_002139485.1| seryl-tRNA synthetase family protein [Cryptosporidium muris RN66]
gi|209555091|gb|EEA05136.1| seryl-tRNA synthetase family protein [Cryptosporidium muris RN66]
Length = 462
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 230/449 (51%), Gaps = 89/449 (19%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M +D++ R EKGGD +K+ +++ R++ + ++++++ D +WR+ K + K N+
Sbjct: 1 MPIDINRIRVEKGGDYDKIAESEMARYRGIGGLEELVKIDQQWRKDIFKLEQVKKEVNVI 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSV 89
SK I + +K K+ + L GN + P V
Sbjct: 61 SKEIAQ-IKKKDAKANCEELQKKSMELKHEILLTEKRVLEVENRREELWNRIGNIVQPDV 119
Query: 90 PVSNNEDENGIVRTKGDTE------VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
P+SN ED+N ++R GD K H ++++ + DS GA +AG RGYFLK
Sbjct: 120 PISNTEDDNKVLRRWGDIPNIIVDGTPGKMHHHEVMSRLGFYDSAKGAEIAGHRGYFLKQ 179
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
V L + LV Y ++ +++GY + P FM++++M + A+L F+E LY +
Sbjct: 180 SGVLLSMALVHYGMNFLVKRGYIAIQPPLFMKRDLMAKAAELKDFEETLYHIPADMNNTK 239
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------- 252
D+ + + +LIATSEQP+ A+H ++ + + LPI+Y G+STCFR+
Sbjct: 240 DA-----DSNSLFLIATSEQPLAALHINTSIEQKDLPIKYAGISTCFRKEAGAHGKDTWG 294
Query: 253 --------------------------------EDLTKSIA--YRVVNIVSGALNHAAAKK 278
E+ +S+ YRVV+IVSGALN AAAKK
Sbjct: 295 LFRVHQFEKVEQFCVTTPEESNEMHEEMINISEEFYQSLGLPYRVVSIVSGALNDAAAKK 354
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLEAWFPG +RELVSCSNC DYQSR L R G K EK+ + H LN T CA R
Sbjct: 355 YDLEAWFPGYNNYRELVSCSNCTDYQSRALECRMGFKKGDREKL-YCHFLNGTLCAVQRT 413
Query: 339 ICAILETHQTETGVRIPDCLRKFVPAVYV 367
+C I E +QT TG++IP L+ ++ ++
Sbjct: 414 LCCIAENYQTTTGLKIPAVLQPYLGMDFI 442
>gi|116199279|ref|XP_001225451.1| hypothetical protein CHGG_07795 [Chaetomium globosum CBS 148.51]
gi|88179074|gb|EAQ86542.1| hypothetical protein CHGG_07795 [Chaetomium globosum CBS 148.51]
Length = 608
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 177/450 (39%), Positives = 225/450 (50%), Gaps = 106/450 (23%)
Query: 10 TEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMK 69
TE+GG+PEK+R++Q+ R VE+VD+VI R+ + A N N K IG K K
Sbjct: 196 TERGGNPEKIRESQRKRHAPVEVVDEVIAMWEDHRRTAYDATQCNGRINGVQKQIGPKKK 255
Query: 70 A--------------KEPVGDSS-----------TLPGNHLHPSVPVSNNED--ENGIVR 102
KE + ++ T+ GN +H SVPVS E+ + G+
Sbjct: 256 GMRLSNRPPDLEKEKKELLASAAEKEKLLRIKVKTI-GNLVHDSVPVSKTENWADEGL-- 312
Query: 103 TKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIE 162
D EV K +DG D E G V G RG F ++ Y L +
Sbjct: 313 ---DHEVLDK---------LDGYDPERGVKVVGHRGTFR---------AIINYGLEFLHD 351
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSE 222
+ Y PL TP M ++ M + AQL+QFDEELYKV GD A DKYLIATSE
Sbjct: 352 REYVPLQTPQLMLRDQMAKTAQLSQFDEELYKV------TGDQA-------DKYLIATSE 398
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------------------DLT 256
QPI A H D WL LP++Y G STCFR+E D
Sbjct: 399 QPISAYHSDEWLQPKELPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKVEQFCITDPE 458
Query: 257 KSIA------------YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQ 304
KS Y+ + I ++AAAKKLDLEAWFP G F+ELVSCSNC DYQ
Sbjct: 459 KSWEMFENMISTSEDFYKSLGIPHHLPDNAAAKKLDLEAWFPHQGEFKELVSCSNCTDYQ 518
Query: 305 SRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPA 364
SR L +R+G K+ + K +VH LN+T ATTR ICAILE QTE GV IP+ LRK++P
Sbjct: 519 SRDLEIRFGIKKQTDAKKIYVHCLNSTLTATTRTICAILENFQTEDGVNIPEPLRKYLPG 578
Query: 365 VYVNEAGEIPFVKTAPIDEEETKKQKKQKE 394
IPF K A +E KK+ ++KE
Sbjct: 579 A----PAFIPFAKQAAEKKEGDKKEGQKKE 604
>gi|288561203|ref|YP_003424689.1| seryl-tRNA synthetase SerS [Methanobrevibacter ruminantium M1]
gi|288543913|gb|ADC47797.1| seryl-tRNA synthetase SerS [Methanobrevibacter ruminantium M1]
Length = 425
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 227/444 (51%), Gaps = 96/444 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ LFR +P+ + ++K RF++ E +KVIE D WR+ + ++ KN S
Sbjct: 1 MLDIKLFRE----NPDLIFDSEKKRFRSTENAEKVIEYDTLWREGESRLNSLRAEKNKLS 56
Query: 62 KVIGEKMK---AKEPVGDSSTLP------------------------GNHLHPSVPVSNN 94
K + K +E + S + GN + VPVS+
Sbjct: 57 KSFKQAKKDGNIEEVIAQSKAVAEEIKELGPKIEEYKQLREDYRYKVGNIIDEDVPVSDT 116
Query: 95 EDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
ED+N IVRT G+ + +HVDLI IDG D E A +AG R Y+LK + L + L
Sbjct: 117 EDDNLIVRTVGELPDFDFEPLNHVDLIEKIDGADIETAASIAGARFYYLKRDILHLNLAL 176
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+Q+AL++ E+GY PL TPFF++ EV E ++L +F+E LYKV E
Sbjct: 177 IQFALNELEERGYIPLQTPFFVKGEVAAETSELGEFEETLYKV---------------EN 221
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------------------- 252
+D YLIAT+EQ + A+HRD + LP+RY +STCFR+
Sbjct: 222 EDLYLIATAEQTLAALHRDEIINPEDLPMRYCALSTCFRKEAGSHGKDTLGIFRVHQFEK 281
Query: 253 -----------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPG 287
ED+ K + Y++V IVS ALN AA K DLEAWFPG
Sbjct: 282 IEQFIFSTPEESKNEHHRLLEVTEDIYKKLGLPYQIVAIVSSALNDNAAIKYDLEAWFPG 341
Query: 288 SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
S +RELVSC+NC DYQ+R+ RYG+ + + +H LN+TA AT R +C ILE +Q
Sbjct: 342 SKTYRELVSCTNCGDYQARKTKTRYGRAGSGDAQT--LHTLNSTAIATERTMCCILENYQ 399
Query: 348 TETG-VRIPDCLRKFVPAVYVNEA 370
+ G V++P+ L ++ V EA
Sbjct: 400 QDDGSVKVPEVLVPYMGGKTVIEA 423
>gi|58265976|ref|XP_570144.1| serine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
gi|134110422|ref|XP_776038.1| hypothetical protein CNBD0870 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258706|gb|EAL21391.1| hypothetical protein CNBD0870 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226377|gb|AAW42837.1| serine-tRNA ligase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 461
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 235/478 (49%), Gaps = 108/478 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + +KGG+P+ VR++QK R +VELVD+VI + + ++ +N + NL
Sbjct: 1 MIDLIHLQADKGGNPDIVRESQKKRGASVELVDEVIAIFAEHKNANYEMENAKRELNLLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+ KAK GD++ L GN + P
Sbjct: 61 KEIGQIKKAK---GDATELLAKKADMDKKIAEMTTRVADLIKKRDQKAGQIGNIVDPQNH 117
Query: 91 VSNNEDENGIVRT-------KGDTEVRKK-------YSHVDLITMIDGVDSEAGAIVAGG 136
VS ED+N ++R KG++++ + SH +++ ++ D++ G V G
Sbjct: 118 VSLTEDDNPVLRLWHPEPNHKGNSQLLDQSDKPEGIISHHEVLARLEAYDTDRGVKVFGH 177
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVI 196
RG++L V L L+ Y L +KG+ + PF ++KE+M AQL FDE LYKV
Sbjct: 178 RGFYLTNDGVDLNQALINYGLDFLRKKGFKKVQPPFMIKKEIMGATAQLEDFDEALYKVS 237
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLT 256
G E D YLIATSEQPI A H D L +LP+ Y G STCFR+E +
Sbjct: 238 GGAE-------------DMYLIATSEQPISAYHMDENLDPKNLPLHYAGYSTCFRKEAGS 284
Query: 257 KS---------------------------------------------IAYRVVNIVSGAL 271
I YR+VNIVSG L
Sbjct: 285 HGRDTWGIFRVHQFEKVEQFVVCEPEASPAELDAMVANSREFYESLGIPYRLVNIVSGGL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAA K DLEAWFP G ++ELVSCSNC DYQSR L VR G K+ ++K FVHMLN T
Sbjct: 345 NNAAAIKYDLEAWFPYQGEYKELVSCSNCTDYQSRSLNVRLG-FKEKDKKTGFVHMLNGT 403
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAV-YVNEAGEIPFVKTAPIDEEETKK 388
CAT R +C ++E +QT G+RIP L+ ++ ++ E+P T+ ++KK
Sbjct: 404 LCATERALCCLVENYQTPEGLRIPKVLQPYMQGRDFLPYTAELPKTSTSKGPSTKSKK 461
>gi|387592703|gb|EIJ87727.1| seryl-tRNA synthetase [Nematocida parisii ERTm3]
gi|387595332|gb|EIJ92957.1| seryl-tRNA synthetase [Nematocida parisii ERTm1]
Length = 440
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/379 (40%), Positives = 201/379 (53%), Gaps = 76/379 (20%)
Query: 51 DNFNKFKNLCSKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVR 110
D + K SK + E +E + + GN L SV + +NED N I+ TE R
Sbjct: 85 DRIAEIKEKKSKCVVELNTKEEETDNIAREIGNILDKSVCIDDNEDNNPII---VQTEKR 141
Query: 111 KK-------YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
K S+ ++ + VD+E G ++G RGYFLKG V L L++YAL +
Sbjct: 142 TKEFWPKQLLSYDLVLDRLGVVDTERGTRISGHRGYFLKGAGVILTQSLIRYALDFLRKS 201
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
YT + TPF MRKE M+ AQL+ FDE+LYKV G +D YLIATSEQ
Sbjct: 202 DYTLIQTPFMMRKESMKRTAQLSDFDEQLYKVEGG--------------NDLYLIATSEQ 247
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------------------ 253
P+ A+H W+ E LPIRY G STCFR+E
Sbjct: 248 PLSALHEGEWIKETELPIRYGGYSTCFRKEAGAHGKDNRGIFRVHQFEKIEQFLITAPEE 307
Query: 254 ---------DLTKS------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
D +K+ ++YRVV+IVSGALN+AAA K DLEA FP S +RELVSCS
Sbjct: 308 SEAEFKKMVDRSKAFYDSLGLSYRVVSIVSGALNNAAAIKYDLEALFPASDRYRELVSCS 367
Query: 299 NCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCL 358
NC DYQSR L VRY T+ NE+ +FVHMLN T CA R +C ++E +QTE G+ +P+ L
Sbjct: 368 NCTDYQSRDLNVRYRPTES-NEEKQFVHMLNGTLCAVQRTLCCLVENYQTEGGIMVPEVL 426
Query: 359 RKFVPAVYVNEAGEIPFVK 377
+V + IPF++
Sbjct: 427 VPYVGETF------IPFIR 439
>gi|321262679|ref|XP_003196058.1| serine-tRNA ligase [Cryptococcus gattii WM276]
gi|317462533|gb|ADV24271.1| Serine-tRNA ligase, putative [Cryptococcus gattii WM276]
Length = 461
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 232/469 (49%), Gaps = 108/469 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + +KGG+P+ VR++QK R +VELVD+VI + + ++ +N + NL
Sbjct: 1 MIDLIHLQADKGGNPDIVRESQKKRGASVELVDEVIAIFAEHKNANYEMENAKRELNLLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+ KAK GD++ L GN + P
Sbjct: 61 KEIGQIKKAK---GDATELLAKKADMDKKIAEMTTRVADLIKKRDQKAGQIGNIVDPQNH 117
Query: 91 VSNNEDENGIVRT-------KGDTEVRKK-------YSHVDLITMIDGVDSEAGAIVAGG 136
VS +ED+N ++R KG++++ + SH +++ ++ D++ G V G
Sbjct: 118 VSLSEDDNPVLRLWHPEPNHKGNSQLLDESDKPEGIISHHEVLARLEAYDTDRGVKVFGH 177
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVI 196
RG++L V L L+ Y L +KG+ + PF ++KE+M AQL FDE LYKV
Sbjct: 178 RGFYLTNDGVDLNQALINYGLDFLRKKGFRKVQPPFMIKKEIMGATAQLEDFDEALYKVS 237
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLT 256
G E D YLIATSEQPI A H D L +LP+ Y G STCFR+E +
Sbjct: 238 GGAE-------------DMYLIATSEQPISAYHMDENLDPKNLPLHYAGYSTCFRKEAGS 284
Query: 257 KS---------------------------------------------IAYRVVNIVSGAL 271
I YR+VNIVSG L
Sbjct: 285 HGRDTWGIFRVHQFEKVEQFVVCEPEASPAELDSMVANAREFYESLGIPYRLVNIVSGGL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAA K DLEAWFP G ++ELVSCSNC DYQSR L VR G K+ ++K FVHMLN T
Sbjct: 345 NNAAAIKYDLEAWFPYQGEYKELVSCSNCTDYQSRSLNVRLG-FKEKDKKTGFVHMLNGT 403
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAV-YVNEAGEIPFVKTA 379
CAT R +C ++E +QT G+RIP L+ ++ ++ E+P T+
Sbjct: 404 LCATERALCCLVENYQTPEGLRIPKVLQPYMQGRDFLPYTAELPKTSTS 452
>gi|403158545|ref|XP_003319248.2| seryl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375166353|gb|EFP74829.2| seryl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 450
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 178/464 (38%), Positives = 232/464 (50%), Gaps = 103/464 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRF--KNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+++L L +T KGG+PE V+ +Q+ R K ELVD+V+ W + + N
Sbjct: 1 MIELQLLQTGKGGNPELVKTSQRKRGGEKAAELVDEVLALYTSWTKVGFQLREVRTEANA 60
Query: 60 CSKVIGEKMKAK---EPV-------------------GDSSTLP-------GNHLHPSVP 90
K IGE KAK EP D+ +L GN +H SV
Sbjct: 61 IKKKIGEAKKAKKEPEPELWTSKEQLDEKIKQLEKEEADAESLLKTRASSIGNIVHESVH 120
Query: 91 VSNNEDENGIVRTKGDTEVRKKY-------SHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
VS ED+N I++T + E K + SH ++ +D VD E GA VAG RG+FL
Sbjct: 121 VSMTEDDNVILKT-WNPEPNKPFEKRAELLSHDVVMHRLDMVDLERGAKVAGHRGFFLIN 179
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
V L ++ Y L KG+ PF MRK +M + AQL +FDE LY++ G GE
Sbjct: 180 DGVDLNQAMINYGLDFLRNKGFRKTMAPFMMRKGLMAKTAQLEEFDEALYRLSGDGE--- 236
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE-------- 253
DDKYLIATSEQP+ A H D W P+ LP++Y G STCFR+E
Sbjct: 237 ---------DDKYLIATSEQPLSAYHSDEWFEKPKEQLPLKYAGYSTCFRKEAGSHGRDT 287
Query: 254 ------------------DLTKS-------------------IAYRVVNIVSGALNHAAA 276
D +KS + YR+V IVSGALN+AAA
Sbjct: 288 WGIFRVHQFEKVEQFCITDPSKSWEMFEEMVQNSEDFYQSLGLGYRLVGIVSGALNNAAA 347
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
KK DLEAWFP G F+ELVS SNC DYQSR L VR G K+ + + +VHMLN T CAT
Sbjct: 348 KKADLEAWFPSMGEFKELVSVSNCTDYQSRSLEVRCGVKKQGDTQKVYVHMLNGTLCATE 407
Query: 337 RVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
R +C ++E +QT G+ IP LR ++ +PFVK AP
Sbjct: 408 RALCCLVENYQTPEGLLIPTVLRPYMQGREF-----LPFVKEAP 446
>gi|405119937|gb|AFR94708.1| serine-tRNA ligase [Cryptococcus neoformans var. grubii H99]
Length = 461
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/451 (35%), Positives = 224/451 (49%), Gaps = 107/451 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + +KGG+P+ VR++QK R +VELVD+VI + + ++ +N + NL
Sbjct: 1 MIDLIHLQADKGGNPDIVRESQKKRGASVELVDEVIAIFAEHKNANYEMENAKRELNLLQ 60
Query: 62 KVIGEKMKAKEPVGDSSTL-------------------------------PGNHLHPSVP 90
K IG+ KAK GD++ L GN + P
Sbjct: 61 KEIGQIKKAK---GDATELLAKKAEMDKKIAEMTTRVADLIKKRDQKAGQIGNIVDPQNH 117
Query: 91 VSNNEDENGIVRT-------KGDTEVRKK-------YSHVDLITMIDGVDSEAGAIVAGG 136
VS ED+N ++R KG++++ + SH +++ ++ D++ G V G
Sbjct: 118 VSLTEDDNPVLRLWHPEPNHKGNSQLLDESDKPEGIISHHEVLARLEAYDTDRGVKVFGH 177
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVI 196
RG++L V L L+ Y L +KG+ + PF ++KE+M AQL FDE LYKV
Sbjct: 178 RGFYLTNDGVDLNQALINYGLDFLRKKGFRKVQPPFMIKKEIMGATAQLEDFDEALYKVS 237
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLT 256
G E D YLIATSEQPI A H D L +LP+ Y G STCFR+E +
Sbjct: 238 GGAE-------------DMYLIATSEQPISAYHMDENLDPKNLPLHYAGYSTCFRKEAGS 284
Query: 257 KS---------------------------------------------IAYRVVNIVSGAL 271
I YR+VNIVSG L
Sbjct: 285 HGRDTWGIFRVHQFEKVEQFIVCEPEASPAELDAMVANSREFYESLGIPYRLVNIVSGGL 344
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
N+AAA K DLEAWFP G ++ELVSCSNC DYQSR L VR G K+ ++K FVHMLN T
Sbjct: 345 NNAAAIKYDLEAWFPYQGEYKELVSCSNCTDYQSRSLNVRLG-FKEKDKKTGFVHMLNGT 403
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFV 362
CAT R +C ++E +QT G+RIP L+ ++
Sbjct: 404 LCATERALCCLVENYQTPEGLRIPKVLQPYM 434
>gi|325959950|ref|YP_004291416.1| seryl-tRNA synthetase [Methanobacterium sp. AL-21]
gi|325331382|gb|ADZ10444.1| Seryl-tRNA synthetase [Methanobacterium sp. AL-21]
Length = 426
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 224/434 (51%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ LFR +P+ + +++K RF+ E V+KVIE DLKWR K + +N S
Sbjct: 1 MLDIKLFRE----NPDLILESEKKRFRTTENVEKVIEFDLKWRNGLKKLNELRAERNKLS 56
Query: 62 KVIGEKMK------------AKEPVGDSSTLP-----------------GNHLHPSVPVS 92
K E K AKE + + L GN L VPVS
Sbjct: 57 KSFNEARKQGKDELKALQNRAKEISKEINELEPKISEYIEARDEFRYKVGNILDSDVPVS 116
Query: 93 NNEDENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
E++N ++ GD + + +HVDLI IDG + + A V+G R Y+LK V L +
Sbjct: 117 ETEEDNKVISEFGDMPSFSFEPANHVDLIETIDGAEFKRAAEVSGSRFYYLKEDIVYLNM 176
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+++A+ +KGY TPFF++ +V++E A+LA F+E LYK+ G
Sbjct: 177 ALLKFAMDTLSQKGYEIFQTPFFIKHDVIKETAELADFEETLYKIEG------------- 223
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
+D ++IATSEQ + A+HR + E +LP +Y G+STCFR+E
Sbjct: 224 --EDLFMIATSEQTLAALHRGEIIDERTLPRKYCGLSTCFRREAGSHGRDTLGIFRVHQF 281
Query: 254 ---------------DLTKSIA-------------YRVVNIVSGALNHAAAKKLDLEAWF 285
DL + + YR+V+IVSG LN AAKK DLEAWF
Sbjct: 282 EKIEQFIFCDAESSRDLHQELLENAELIYQKLGLPYRIVSIVSGELNDNAAKKYDLEAWF 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
PGS +RELVSC+NC DYQ+R+L RYG ++ ++ H LN+TA AT R IC ILE
Sbjct: 342 PGSSTYRELVSCTNCGDYQARKLNARYG-IHGDSDSLKMCHTLNSTAIATERTICCILEN 400
Query: 346 HQTETG-VRIPDCL 358
+Q E G +++P+ L
Sbjct: 401 YQQEDGTIKVPEVL 414
>gi|156094491|ref|XP_001613282.1| seryl-tRNA synthetase [Plasmodium vivax Sal-1]
gi|148802156|gb|EDL43555.1| seryl-tRNA synthetase, putative [Plasmodium vivax]
Length = 616
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/555 (31%), Positives = 240/555 (43%), Gaps = 183/555 (32%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFR EKGG+PEK+++++K RF + VDKVIE D +WR+ K + K NL
Sbjct: 67 MVLDINLFRKEKGGNPEKIKESEKKRFHDETNVDKVIEFDEQWRKCIFKLEELKKNINLV 126
Query: 61 SKVIGEKMK----------AKEPVGDSSTLP--------------------GNHLHPSVP 90
+K IG K K K+ + +P GN L+ V
Sbjct: 127 NKEIGAKKKEDKNADVEDLKKKSLAMKEEIPQLQNQERDLLKQRNKYLSKVGNLLNKDVV 186
Query: 91 VSNNEDENGIVRTKG------------------------------------------DTE 108
SN+ED N +V T G
Sbjct: 187 TSNDEDNNKVVTTWGVCKKLEVTAEEAPEGGSSKREVPVSGGISGSGGIGSISSISSGVG 246
Query: 109 VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPL 168
++ Y H DL+ I G + + G VAG RGY+L G L ++QYA+S + K YTP+
Sbjct: 247 GKRYYYHFDLLRKIGGANFKKGIQVAGHRGYYLTGAGFLLHNAILQYAISFLVSKNYTPV 306
Query: 169 YTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK--------------------VGDSAPE 208
Y P FM+K +M+E A+L F+E LY++ G + +
Sbjct: 307 YPPVFMKKNIMEECAELDDFEETLYRIASSGGGSTGTAGGATGGASGAASGSPTSANVTQ 366
Query: 209 KDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
DEL DD +LIATSEQP+CA+H+D + LP++Y GVS+CFR+E
Sbjct: 367 NDELSRDDLFLIATSEQPLCALHKDETIESKYLPLKYAGVSSCFRKEAGAHGKDIRGILR 426
Query: 254 -----------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDL 281
++ K+ I YR+V+IVSGALN+AAA K DL
Sbjct: 427 VHQFDKIEQFCVSLPQTSNKVHKEMMKTCEEFYQSLNIPYRIVSIVSGALNNAAAVKFDL 486
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK------------------------ 317
E +FP S +RELVSCSNC DYQS L V+Y +
Sbjct: 487 EGYFPASNQYRELVSCSNCTDYQSNNLNVKYVDSSVKVGDFKESGGSGGGGGEGNGKGNY 546
Query: 318 ---------------MNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFV 362
E VH+LN T A R +C +LE +Q G+ +P+ LR
Sbjct: 547 HDEVGSDYEDFLQNFQTESRNTVHLLNGTMVAAQRFLCCLLENYQNGEGIVVPEKLRP-- 604
Query: 363 PAVYVNEAGEIPFVK 377
Y+N IPF +
Sbjct: 605 ---YMNNVEFIPFTE 616
>gi|124511894|ref|XP_001349080.1| seryl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
gi|23498848|emb|CAD50925.1| seryl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
Length = 539
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 249/544 (45%), Gaps = 172/544 (31%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFR EKGG+P+K++++++ R+ + VDKVIE D KWR+ + + K N+
Sbjct: 1 MVLDINLFRKEKGGNPDKIKESERKRYHDENNVDKVIEYDDKWRKCIFELEELKKNINMI 60
Query: 61 SKVIGEKMKA----------KEPVGDSSTLP--------------------GNHLHPSVP 90
+K IG K K K+ + +P GN L+ V
Sbjct: 61 NKEIGNKKKVDKNADVEDLKKKSLNIKEEIPKYQLKEKELLKERNKYISKIGNLLNIKVV 120
Query: 91 VSNNEDENGIVRTKGDTEV----------------------RKKYSH------------- 115
S+NED N IV+T G+ ++ R+ ++
Sbjct: 121 CSDNEDNNKIVKTWGECKILPACEENDNSIHDNVVNSNNIKRETLNNEVDNKKKIKYYYH 180
Query: 116 VDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMR 175
DL+ I G + + G VAG RGY+L G L ++QYAL+ + K Y P+Y PFFM+
Sbjct: 181 YDLLRKIGGANFKKGIQVAGHRGYYLTGAGFLLHNAILQYALNFLVNKKYIPVYPPFFMK 240
Query: 176 KEVMQEVAQLAQFDEELYKVIGKGE-------------KVGDSAPEKDEL---------- 212
K +M+E A+L F+E LYK+ K+ A KD+
Sbjct: 241 KNIMEECAELDDFEETLYKIPSTSNSTLSSQQVSTSPTKISSQADIKDDTTCNSQKKTNI 300
Query: 213 --------DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DL--- 255
DD +LIATSEQP+CA+H+D + LP++Y G S+CFR+E D+
Sbjct: 301 PSNEDLTRDDLFLIATSEQPLCALHKDETIESKRLPLKYAGFSSCFRKEAGAHGKDIRGI 360
Query: 256 ------------------------------------TKSIAYRVVNIVSGALNHAAAKKL 279
+ +I YR+V+IVSGALN+AA+ K
Sbjct: 361 LRVHQFDKVEQFCIALPQHSNKIHEEMIQTCEEFYQSLNIPYRIVSIVSGALNNAASIKY 420
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----------KMNEKIE------ 323
DLE +FP S +RELVSCSNC DYQS L +RY + +N++++
Sbjct: 421 DLEGFFPTSNQYRELVSCSNCTDYQSINLNIRYSDSSIKINDLNKNTNLNDEMDSEYEHF 480
Query: 324 ----------FVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEI 373
VH+LN T A R +C +LE +Q G+ +P+ LR Y+N I
Sbjct: 481 LTNFNTENKYHVHLLNGTMVAAQRFLCCLLENYQNGEGIVVPEKLRP-----YMNNMDFI 535
Query: 374 PFVK 377
PF++
Sbjct: 536 PFME 539
>gi|123417088|ref|XP_001305028.1| seryl-tRNA synthetase family protein [Trichomonas vaginalis G3]
gi|121886520|gb|EAX92098.1| seryl-tRNA synthetase family protein [Trichomonas vaginalis G3]
Length = 501
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 223/446 (50%), Gaps = 88/446 (19%)
Query: 3 LDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQ-FRHKADNF-------- 53
+D+ FR + + + R+NQ+ R + EL+D+++++D ++R + AD
Sbjct: 17 VDIKNFRGKTDEELQVWRENQRKRNRPPELIDQIVKDDEEYRAALKAVADTMKEKNQAQA 76
Query: 54 -------------------NKFKNLCSKVIGEKMKAKE---PVGDSSTLPGNHLHPSVPV 91
K + L +K+ + K E V + G + P VP
Sbjct: 77 SLKPKGGVKLAPEEIEAIKEKCRQLTAKISELEAKRDELFAKVEKELSTVGVMIEPEVPD 136
Query: 92 SNNEDENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
S +E N ++ G E+ H +L+ MIDG + E GA VAG RGY+LKG A+ L
Sbjct: 137 SLDEANNKVIMMCGKIPEIPNFRPHNELLAMIDGYEPERGARVAGHRGYYLKGMALKLNQ 196
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L +Y L GYT ++TPFFM+ EVM V QL F E LY + +P D
Sbjct: 197 ALFRYGLDFLQAHGYTAIHTPFFMKSEVMARVCQLEDFQETLYHI---------DSPTND 247
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD +LIATSEQ +C H + L ++ LP +Y G S+CFR+E
Sbjct: 248 PKDDMFLIATSEQTLCGYHLNESLDDSQLPKKYCGFSSCFRKEAGASGKDNWGIFRVHQF 307
Query: 254 ----------------------------DLTKSIA--YRVVNIVSGALNHAAAKKLDLEA 283
+ KS+ +R V +VSG LN++ A+K+D+EA
Sbjct: 308 EKVEQFCITSPHNGESQKMHEQMVHNSCEFIKSLGLPFRAVLVVSGELNYSTARKVDIEA 367
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFP +RELVS SNC D+QSR+L +RYG K + + E+VHMLNAT CAT R +C IL
Sbjct: 368 WFPSYNQYRELVSASNCKDFQSRKLDIRYGHGKNKDGEKEYVHMLNATLCATERTLCCIL 427
Query: 344 ETHQTETGVRIPDCLRKFVPAVYVNE 369
E +QT TG+RIP L+ ++ + ++E
Sbjct: 428 ENYQTPTGIRIPKVLQPYMRELMLSE 453
>gi|148643770|ref|YP_001274283.1| seryl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
gi|222444800|ref|ZP_03607315.1| hypothetical protein METSMIALI_00413 [Methanobrevibacter smithii
DSM 2375]
gi|261350627|ref|ZP_05976044.1| serine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
gi|148552787|gb|ABQ87915.1| seryl-tRNA synthetase, SerS [Methanobrevibacter smithii ATCC 35061]
gi|222434365|gb|EEE41530.1| serine--tRNA ligase [Methanobrevibacter smithii DSM 2375]
gi|288861410|gb|EFC93708.1| serine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
Length = 425
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 221/436 (50%), Gaps = 96/436 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ LFR +PE + ++K RF+ E +KVIE D WR+ + + KN S
Sbjct: 1 MLDIKLFRE----NPELIFDSEKKRFRGTETAEKVIEYDTLWREGEKRLNFLRSEKNRLS 56
Query: 62 KV--------------------------IGEKMKAKEPVGDSSTLP-GNHLHPSVPVSNN 94
K +G K++ + + D GN + VP+S+
Sbjct: 57 KSFKKAKQEGNLEEVIAQSKEVANEIKELGPKIEEYKKLRDDYRYKVGNIIDEDVPISDT 116
Query: 95 EDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
ED+N IV+ G+ + +HVDLI IDG D + A +AG R Y+LK + L + L
Sbjct: 117 EDDNKIVKEYGEIPEFDFEPLNHVDLIEKIDGADMKTAAQIAGARFYYLKRDILHLNLAL 176
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+Q+AL++ KGY PL TPFF++ EV E ++L +F+E LYKV
Sbjct: 177 IQFALNELESKGYIPLQTPFFVKGEVAAETSELGEFEETLYKVAD--------------- 221
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------- 253
+D YLIAT+EQ + A+HRD + LPI+Y +STCFR+E
Sbjct: 222 EDLYLIATAEQTLAALHRDEIIAPEDLPIQYCALSTCFRKEAGSHGKDTLGIFRVHQFEK 281
Query: 254 --------------------DLTKSI------AYRVVNIVSGALNHAAAKKLDLEAWFPG 287
++T+ I Y VV IVS ALN AA K DLEAWFPG
Sbjct: 282 IEQFIYTTPEESKNAHKKLLEVTEEIYQKLGLHYHVVAIVSSALNDNAAVKYDLEAWFPG 341
Query: 288 SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
S A+RELVSC+NC DYQ+R+ R+G+ + + +H LN+TA AT R IC +LE +Q
Sbjct: 342 SKAYRELVSCTNCKDYQARKTKTRFGKAGSGDAQT--LHTLNSTAIATERTICCLLENYQ 399
Query: 348 TETG-VRIPDCLRKFV 362
E G V++PD L ++
Sbjct: 400 QEDGSVKVPDVLVPYM 415
>gi|346322972|gb|EGX92570.1| seryl-tRNA synthetase [Cordyceps militaris CM01]
Length = 493
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 235/490 (47%), Gaps = 124/490 (25%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F TE+GGDP ++R++Q+ RF + +VD+VI R+ ++ A + N
Sbjct: 1 MLDVNDFITERGGDPGRIRESQRRRFADEGIVDQVIALFEDHRKTQYGASQISSKINEVQ 60
Query: 62 KVIGEK----------------------MKAKEPVGD----------------------- 76
K+IG K MKAKE D
Sbjct: 61 KLIGAKKKVHLSVMICSVGIPETLTGCSMKAKEDASDLLQQKIELEKEKKLTAESAAQKE 120
Query: 77 ------SSTLPGNHLHPSVPVSNNEDENGIVRTKGD----TEVRKKYSHVDLITMIDGVD 126
ST+ GN + SVPVSNNED+N + RT E R SH +++ +DG D
Sbjct: 121 RLLRAKISTV-GNIVDDSVPVSNNEDDNAVQRTWAPEGVAIEKRNVLSHHEVLLRLDGYD 179
Query: 127 SEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLA 186
+ G V G RGYFL+ V L L+ Y L ++GY PL P FM KE M + AQL
Sbjct: 180 PDRGVKVVGHRGYFLRQWGVFLNQALINYGLEFLSKRGYCPLQAPQFMLKEYMAKTAQLD 239
Query: 187 QFDEELYKVIGKGEKVGD-----------SAPEKDE------LDDKYLIATS-------- 221
FDE+LYKV+ G++ D SA DE L KY++ ++
Sbjct: 240 DFDEQLYKVL-DGDEANDKYLIATSEQPISAFHADEWLIAKDLPIKYIVISTMIISNDPV 298
Query: 222 -------------------------------EQPICAVHRDSWLPEASLPIRYLGVSTCF 250
EQ + SW + +GVS F
Sbjct: 299 TVSLGMPAIVPAIGERLALMGEMRGLNKTQVEQFVLTDPEKSWEAFEEM----IGVSEEF 354
Query: 251 RQEDLTKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLV 310
Q + + Y+V+ IVSGALN+AAAKK DLEAWFP G ++ELVSCSNC DYQSR L +
Sbjct: 355 YQ---SLGLPYQVIAIVSGALNNAAAKKFDLEAWFPHQGEYKELVSCSNCTDYQSRALDI 411
Query: 311 RYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEA 370
R+G + + K ++VH LN+T CATTR +C +LE +QTE G+R+P+ LRK++P
Sbjct: 412 RFGAKTQTDTKKKYVHCLNSTLCATTRTLCCVLENYQTEDGIRVPEPLRKYLPGT----P 467
Query: 371 GEIPFVKTAP 380
IPF + P
Sbjct: 468 EFIPFARELP 477
>gi|330933004|ref|XP_003304005.1| hypothetical protein PTT_16417 [Pyrenophora teres f. teres 0-1]
gi|311319652|gb|EFQ87890.1| hypothetical protein PTT_16417 [Pyrenophora teres f. teres 0-1]
Length = 593
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 190/356 (53%), Gaps = 67/356 (18%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGG 136
GN+++ VPVS+NED N + +T + ++ H ++ ++G D E G + G
Sbjct: 243 GNYVYKDVPVSDNEDNNAVQKTWAPEGRKAEFKADGIPHHGVLARLNGYDPERGTKIVGH 302
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVI 196
RGY L G V L L+ Y L KG+TP PFFM ++ M + AQL+ FDEELYKV
Sbjct: 303 RGYCLTGYGVFLNQALINYGLEFLFSKGFTPNQPPFFMLRDQMAKTAQLSDFDEELYKVT 362
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---- 252
+K PE DKYLIATSEQPI A+H + WL LPI+Y G ST FR+
Sbjct: 363 ESKDK-----PET----DKYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFRKEAGS 413
Query: 253 ---------------------------------------EDLTKSIA--YRVVNIVSGAL 271
E+ +S+ Y+VV IVSGAL
Sbjct: 414 HGKDAWGIFRIHQFEKVEQFLLTHPEKSWEAFDEMLANSEEFYQSLGLPYQVVAIVSGAL 473
Query: 272 NHAAAKKLDLEAWFP--GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLN 329
N+AA+ K DLEAWFP G G ++ELVS SNC DYQ+R L +R+G K + E+VH LN
Sbjct: 474 NNAASMKRDLEAWFPVTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEYVHALN 533
Query: 330 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK--TAPIDE 383
T CAT R +C ILE +QT G +P+ LRK++P + +PFVK AP D+
Sbjct: 534 GTLCATERTLCCILENYQTPEGFTVPEVLRKYIPG----QPEFLPFVKEWKAPKDD 585
>gi|428672115|gb|EKX73030.1| seryl-tRNA synthetase, putative [Babesia equi]
Length = 455
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 227/453 (50%), Gaps = 93/453 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++ FR K + +R+++ R + +VD VIE D +W++ + + K N
Sbjct: 1 MVLDINYFRDSKL--LQLLRESETRRCETNSVVDAVIEADEEWKKAMYAYEQLKKGINEA 58
Query: 61 SKVIGEKMK-------AKEP----------------------VGDSS-------TLPGNH 84
SK I E K + +P + DS+ L GN
Sbjct: 59 SKNISEYTKKNKGADLSSDPTFKELREKAEEKKKGLPDLQKRIDDSTDKRNELLKLVGNI 118
Query: 85 LHPSVPVSNNEDENGIVRT-KGD-TEVRKK-----YSHVDLITMIDGVDSEAGAIVAGGR 137
+ S +E N ++R G+ EV K H +++T I+G++ G +AG R
Sbjct: 119 VDKDTVQSKDESLNRVLRKWHGEHAEVPKPPAQRILQHHEILTKINGLECNKGVEIAGHR 178
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
G+FLKG L + L+QY + + KGY P++ P+FM+KEV+ E A+L F+E LY V G
Sbjct: 179 GFFLKGAGCLLNLALIQYGMQFLVRKGYLPVHPPYFMKKEVLGECAELLDFEETLYAVGG 238
Query: 198 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---- 253
+ EK + D D +LIATSEQP+ A+HR+ LPI+Y GVS+CFR+E
Sbjct: 239 Q-EKHDAHTHQTDSKDRLFLIATSEQPLAALHRNEVYQAKQLPIKYAGVSSCFRKEAGAH 297
Query: 254 --DL---------------------------------------TKSIAYRVVNIVSGALN 272
DL + I YRVV+IV+GALN
Sbjct: 298 GKDLKGIFRIHQFQKVEQFIVTTAENSVAIHEEMMRHSEEFYQSLGIPYRVVSIVAGALN 357
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
AAAKK DLEAWFPG G +RELVSCSNC DYQ+R L RY N+ F+HMLN T
Sbjct: 358 KAAAKKYDLEAWFPGYGDYRELVSCSNCTDYQARALNARYFTGDTANKT--FLHMLNGTL 415
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKFVPAV 365
A+ R +C +LE +QT+ GV +P L F+ V
Sbjct: 416 VASQRCLCCVLENYQTDHGVVVPKVLVPFMDGV 448
>gi|302784382|ref|XP_002973963.1| hypothetical protein SELMODRAFT_414448 [Selaginella moellendorffii]
gi|300158295|gb|EFJ24918.1| hypothetical protein SELMODRAFT_414448 [Selaginella moellendorffii]
Length = 419
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 220/438 (50%), Gaps = 106/438 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR--QFR--HKADNFNKFK 57
+LD+ L R DP V+++Q+ RF+ VD VI+ D +WR QF K+ + NK +
Sbjct: 1 MLDIKLLR----DDPALVKESQRRRFQPESDVDDVIDLDRQWRTAQFNLEKKSADINKIE 56
Query: 58 NLCSKVIGEKMKAKEPVGDSSTLP------------------------GNHLHPSVPVSN 93
+K++ + + + L GN +H SVPVS+
Sbjct: 57 KEIAKLLRTNGDSANLLAEKGALENEHTELKLRASKLKLELDSKLKSLGNLVHDSVPVSS 116
Query: 94 NEDENGIVRTKG----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NE + +V G D E + +HV L +D VD E GA VAG RGY+L P L
Sbjct: 117 NEKDKVVVTKWGVPRQDQEALE--NHVSLCKKLDAVDVERGAAVAGHRGYYLLDPGFELN 174
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV + L ++GY + TP M K VM+ AQL+QFDEELY++ G+G
Sbjct: 175 MALVNFGLKFLKDRGYRKIQTPTLMDKAVMKCCAQLSQFDEELYELAGEG---------- 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
KYLIATSEQ +C +D + SLP+RY G S+CFR+
Sbjct: 225 -----KYLIATSEQALCGYLKDKNVAPESLPLRYAGYSSCFRKEAGSHGKDTLGIFRVHE 279
Query: 253 -------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAW 284
E++ K+ + Y+VVN+VSG LN AAAKK DLEAW
Sbjct: 280 FQKVEQFCVTAPETSWDMLEEMIKTSEDFYQQLGLPYQVVNVVSGELNDAAAKKYDLEAW 339
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP +G + ELVSCSNC DYQ+R L ++ G+ + VH+LN T AT R +C I+E
Sbjct: 340 FPAAGKYEELVSCSNCTDYQARSLNIKSGK--------KLVHLLNCTLVATQRTMCCIVE 391
Query: 345 THQTETGVRIPDCLRKFV 362
+QT GVR+P+ L+ F+
Sbjct: 392 NYQTRNGVRVPEVLQPFM 409
>gi|302771363|ref|XP_002969100.1| hypothetical protein SELMODRAFT_231245 [Selaginella moellendorffii]
gi|300163605|gb|EFJ30216.1| hypothetical protein SELMODRAFT_231245 [Selaginella moellendorffii]
Length = 419
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 220/438 (50%), Gaps = 106/438 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR--QFR--HKADNFNKFK 57
+LD+ L R DP V+++Q+ RF+ VD VI+ D +WR QF K+ NK +
Sbjct: 1 MLDIKLLRD----DPALVKESQRRRFQPESDVDDVIDLDRQWRAAQFNLEKKSAEINKIE 56
Query: 58 NLCSKVIGEKMKAKEPVGDSSTLP------------------------GNHLHPSVPVSN 93
+K++ + + + L GN +H SVPVS+
Sbjct: 57 KEIAKLLRTNGDSANLLAEKGALENEHTELKLRASKLKLELDSKLKSLGNLVHDSVPVSS 116
Query: 94 NEDENGIVRTKG----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
NE + +V G D E + +HV L +D VD E GA VAG RGY+L P L
Sbjct: 117 NEKDKVVVTKWGVPRQDQEALE--NHVSLCKKLDAVDVERGAAVAGHRGYYLLDPGFELN 174
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ LV + L ++GY + TP M K VM+ AQL+QFDEELY++ G+G
Sbjct: 175 MALVNFGLKFLKDRGYRKIQTPTLMDKAVMKCCAQLSQFDEELYELAGEG---------- 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
KYLIATSEQ +C +D+ + SLP+RY G S+CFR+
Sbjct: 225 -----KYLIATSEQALCGYLKDNNVAPESLPLRYAGYSSCFRKEAGSHGKDTLGIFRVHE 279
Query: 253 -------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAW 284
E++ K+ + Y+VVN+VSG LN AAAKK DLEAW
Sbjct: 280 FQKVEQFCVTSPETSWDMLEEMIKTSEDFYQQLGLPYQVVNVVSGELNDAAAKKYDLEAW 339
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP +G + ELVSCSNC DYQ+R L ++ G+ + VH+LN T AT R +C I+E
Sbjct: 340 FPAAGKYEELVSCSNCTDYQARSLNIKSGK--------KLVHLLNCTLVATQRTMCCIVE 391
Query: 345 THQTETGVRIPDCLRKFV 362
+QT GVR+P+ L+ F+
Sbjct: 392 NYQTRNGVRVPEVLQPFM 409
>gi|154284291|ref|XP_001542941.1| seryl-tRNA synthetase [Ajellomyces capsulatus NAm1]
gi|150411121|gb|EDN06509.1| seryl-tRNA synthetase [Ajellomyces capsulatus NAm1]
Length = 415
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 218/429 (50%), Gaps = 94/429 (21%)
Query: 5 LDLFRTEKGGDPEKV-------RKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFK 57
LD+ G PEK+ ++NQ+ R VE +D+VI + + + NK +
Sbjct: 2 LDIADFVHGATPEKITENQERLKENQRRRGAPVEAIDEVI----ALFKLAREGEKINKVQ 57
Query: 58 NL----------CSKVIGEKMKAKEPVGDSSTLP--------------GNHLHPSVPVSN 93
+ +I EK + ++ D+ GN++H VP S
Sbjct: 58 KEIGKKKKNKEDAADLIAEKTELEKQKKDADAAATEKELLRDQKLASIGNYVHEDVPTSQ 117
Query: 94 NEDENGIVRTKGDTEVRKK-----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
+E +N I+ T +++ SH D++ +DG D + G + G RGY L + L
Sbjct: 118 DEADNAILSTWAPEWFKEEKPAYCLSHDDVLHRLDGFDQKRGTKIFGHRGYCLVNYGLLL 177
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
+ LV Y L K YT P+FM K+ M + AQL QFDEELYKV
Sbjct: 178 NLALVNYGLEFLFRKKYTLNQPPYFMLKKFMAKTAQLEQFDEELYKV----------TEN 227
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E
Sbjct: 228 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGQGEQFVMTKP 287
Query: 254 --------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVS 296
D+ K+ + YRVV+IVSGALN+AA++K DLEAWFP G ++ELVS
Sbjct: 288 EDSWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWFPSQGKYKELVS 347
Query: 297 CSNCLDYQSRRLLVRYGQTKKM----------NEKIEFVHMLNATACATTRVICAILETH 346
CSNC DYQ+R L +RY Q K + N+KI +VH LNAT CAT R +C ILE +
Sbjct: 348 CSNCTDYQTRALEIRYRQKKDLADEKESGADENKKI-YVHALNATLCATERTLCCILENY 406
Query: 347 QTETGVRIP 355
QTET V +P
Sbjct: 407 QTET-VSLP 414
>gi|451999480|gb|EMD91942.1| hypothetical protein COCHEDRAFT_1154958 [Cochliobolus
heterostrophus C5]
Length = 595
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 188/350 (53%), Gaps = 67/350 (19%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGG 136
GN+++ VPVS+NED N +++T + +++ H ++ ++G D E G + G
Sbjct: 243 GNYVYKDVPVSDNEDNNAVLKTWAPESRKAEFNKEGIPHHGVLARLNGYDPERGTKIVGH 302
Query: 137 RGY--FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYK 194
RGY L G V L L+ Y L KG+TP PFFM ++ M + AQL+ FDEELYK
Sbjct: 303 RGYEHCLTGYGVFLNQALINYGLEFLFSKGFTPNQPPFFMLRDQMAKTAQLSDFDEELYK 362
Query: 195 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-- 252
V +K PE D KYLIATSEQPI A+H + WL LPI+Y G ST FR+
Sbjct: 363 VTESKDK-----PETD----KYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFRKEA 413
Query: 253 -----------------------------------------EDLTKSIA--YRVVNIVSG 269
E+ +S+ Y+VV IVSG
Sbjct: 414 GSHGKDAWGIFRIHQFEKVEQFLLTHPEKSWEAFDEMLANSEEFYQSLGLPYQVVAIVSG 473
Query: 270 ALNHAAAKKLDLEAWFP--GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
ALN+AA+ K DLEAWFP G G ++ELVS SNC DYQ+R L +R+G K + E+VH
Sbjct: 474 ALNNAASMKRDLEAWFPVTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEYVHA 533
Query: 328 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
LN T CAT R +C ILE +QT G +P+ LRK++P + +PFVK
Sbjct: 534 LNGTLCATERTLCCILENYQTPEGFVVPEVLRKYIPG----QPDFLPFVK 579
>gi|269860513|ref|XP_002649977.1| seryl-tRNA synthetase [Enterocytozoon bieneusi H348]
gi|220066596|gb|EED44072.1| seryl-tRNA synthetase [Enterocytozoon bieneusi H348]
Length = 426
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 219/445 (49%), Gaps = 98/445 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D++LFRT +G E+V+K++K+RFK+V +VDK++E DL+ + +++ + K N
Sbjct: 1 MIDINLFRTPEG--IEQVKKSEKNRFKDVSVVDKIVEMDLERIKTQYEYEQICKRINYNL 58
Query: 62 KVIGEKMK-AKEPVGDSSTLP--------------------------------GNHLHPS 88
K IG+ MK A P L GN L
Sbjct: 59 KQIGQNMKVANSPSEKEEILSKYNTIEEKKERDRLLKKLEMLESSIHEKLNGIGNILDEE 118
Query: 89 VPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
VPV ED N +VR E+ K + M ++SEAG G RGYFL+G L
Sbjct: 119 VPVHETEDGNKVVREFQCGELPIKIQSFSQL-MSAFINSEAGTRACGHRGYFLEGQMALL 177
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
GL YA+ +GY + TP ++KEVM++ AQL+ FDE+LY +
Sbjct: 178 ANGLRNYAIDFLCSRGYVLIQTPVMLKKEVMKQTAQLSDFDEQLYHISD----------- 226
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
D+ YLIATSEQP+ + + ++ LP Y G S CFR+E
Sbjct: 227 ----DNMYLIATSEQPLTTLFMEKRFTDSELPKMYAGESLCFRKEAGAHGKDNAGIFRVH 282
Query: 254 ----------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEA 283
D K+ I +R V I SG +N AA+KK DLEA
Sbjct: 283 QFEKIEQFIICKPEESYAYHEKMILLAEDFYKTLEIPFRTVLIASGEMNDAASKKYDLEA 342
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFP + +RELVS SNC DYQSR L V YG +KK NEK ++VHMLNAT CA R +C ++
Sbjct: 343 WFPNAQKYRELVSASNCTDYQSRNLNVYYGYSKK-NEKPQYVHMLNATLCAVQRTLCCLV 401
Query: 344 ETHQTETG-VRIPDCLRKFVPAVYV 367
E +Q G +RIP L+K++ Y+
Sbjct: 402 ENYQDANGKIRIPKVLQKYLNFEYI 426
>gi|322706038|gb|EFY97620.1| putative serine-tRNA ligase, cytosolic [Metarhizium anisopliae
ARSEF 23]
Length = 471
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 232/487 (47%), Gaps = 107/487 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ F TE+GGDPEK+R++Q+ R NVE+VD++I R+ ++ A N N
Sbjct: 1 MLDVIDFITERGGDPEKIRESQRRRSANVEVVDEIIALFEDHRRTQYSATQVNSKINDVQ 60
Query: 62 KVIGEKMKAKE---------------------PVGDSSTL-------PGNHLHPSVPVSN 93
K IG K KAKE + L GN++H SVPVSN
Sbjct: 61 KQIGAKKKAKEDADELLKQKVELEKEKKALVESAAEKDALLKAKIKTVGNYVHDSVPVSN 120
Query: 94 NEDENGIVRT---KGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
NED N + RT +G T ++ SH +++ +DG D + G V G RGYFL+ V L
Sbjct: 121 NEDNNVVERTWAPEGATVEKRSNVLSHHEVLLRLDGYDPDRGVKVVGHRGYFLRQWGVFL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
L+ Y L ++GYTPL TP FM K+ M + AQL QFDEELYKV K
Sbjct: 181 NQALINYGLEFLSQRGYTPLQTPQFMLKDYMGKTAQLEQFDEELYKVTDGEAK------- 233
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST------CFRQEDLTKSIAYR 262
+DKYLIATSEQPI A H D WL LPI+ S +R K AY
Sbjct: 234 ----NDKYLIATSEQPISAFHADEWLIPKDLPIKREAGSHGRDAWGIYRVHQFEKVKAYL 289
Query: 263 ---VVNIVSGALNHAAAKKLDL----EAW------------------FPG------SGAF 291
+N S N A ++ L ++W P SGA
Sbjct: 290 PAPCINRGSFTANRAKIEQFLLTDPEKSWDAFHDMIGISEEFYKSLELPYQIVSIVSGAL 349
Query: 292 RELVS--------------------CSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
S CSNC DYQSR L +R+G + + K ++VH LN+T
Sbjct: 350 NNAASKKLDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRFGSKMQTDVKKKYVHCLNST 409
Query: 332 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQK 390
CATTR +C ILE +QTE G+R+P+ LRK++P A E IPF K P + K
Sbjct: 410 LCATTRTMCCILENYQTEEGLRVPEPLRKYLPG-----APEFIPFAKELPKESTSQKSLP 464
Query: 391 KQKEGMK 397
++ +G K
Sbjct: 465 QRPKGGK 471
>gi|451854401|gb|EMD67694.1| hypothetical protein COCSADRAFT_168875 [Cochliobolus sativus
ND90Pr]
Length = 600
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 187/355 (52%), Gaps = 72/355 (20%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGG 136
GN+++ VPVS+NED N +++T + +++ H ++ ++G D E G + G
Sbjct: 243 GNYVYKDVPVSDNEDNNAVLKTWAPESRKAEFNKEGIPHHGVLARLNGYDPERGTKIVGH 302
Query: 137 RGYFLKGPAVCL-------QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD 189
RGY P CL L+ Y L KG+TP PFFM ++ M + AQL+ FD
Sbjct: 303 RGYGKCAPEYCLIGYGVFLNQALINYGLEFLFSKGFTPNQPPFFMLRDQMAKTAQLSDFD 362
Query: 190 EELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTC 249
EELYKV +K PE D KYLIATSEQPI A+H + WL LPI+Y G ST
Sbjct: 363 EELYKVTESKDK-----PETD----KYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTN 413
Query: 250 FRQ-------------------------------------------EDLTKSIA--YRVV 264
FR+ E+ +S+ Y+VV
Sbjct: 414 FRKEAGSHGKDAWGIFRIHQFEKVEQFLLTHPEKSWEAFDEMLANSEEFYQSLGLPYQVV 473
Query: 265 NIVSGALNHAAAKKLDLEAWFP--GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKI 322
IVSGALN+AA+ K DLEAWFP G G ++ELVS SNC DYQ+R L +R+G K +
Sbjct: 474 AIVSGALNNAASMKRDLEAWFPVTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRK 533
Query: 323 EFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
E+VH LN T CAT R +C ILE +QT G +P+ LRK++P + +PFVK
Sbjct: 534 EYVHALNGTLCATERTLCCILENYQTPEGFVVPEVLRKYIPG----QPDFLPFVK 584
>gi|340508894|gb|EGR34499.1| seryl-tRNA synthetase, putative [Ichthyophthirius multifiliis]
Length = 356
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 185/338 (54%), Gaps = 62/338 (18%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKK-YSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
N +H SVP+S +E +N I + G+ ++ H L+ MIDG D + G V G RGYFL
Sbjct: 29 NIVHESVPISKDEKDNKIEKKWGEIPLKNPILHHHQLLYMIDGFDQKRGQKVFGHRGYFL 88
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
K + L L+ Y + +++ YTP+ TPF M+ +M E+ QL +F+E LYK+
Sbjct: 89 KNYGLILLQSLINYGQNLLMKRNYTPIQTPFLMKSHIMHEICQLQEFEENLYKI------ 142
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
++++ +D YLIATSEQP+C +H W+ + +LP +Y G+S+CFR+E
Sbjct: 143 ------QQEDQEDMYLIATSEQPLCGLHSQEWIDQKNLPFKYAGISSCFRKEAGAAGRQT 196
Query: 254 ------------------DLTKS-------------------IAYRVVNIVSGALNHAAA 276
+ KS I YRVV+IVSGALN AAA
Sbjct: 197 WGIFRVHQFEKVEQFIICEPQKSWEEFDNMIQISEEFLQNLKIPYRVVSIVSGALNGAAA 256
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
KK DLE WFPG ++EL+S SNC DYQSR+L ++ G+ K ++VH+LN T CA
Sbjct: 257 KKCDLECWFPGYREYKELMSISNCTDYQSRQLNIQTGEPKNK----QYVHLLNGTLCAAQ 312
Query: 337 RVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIP 374
R + ILE +Q + G+R+PD L+ +V ++ E P
Sbjct: 313 RTLTCILENYQEKEGIRVPDVLQPYVGIDFIKFKHEQP 350
>gi|378754808|gb|EHY64837.1| seryl-tRNA synthetase [Nematocida sp. 1 ERTm2]
Length = 439
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 192/345 (55%), Gaps = 70/345 (20%)
Query: 82 GNHLHPSVPVSNNEDENGIVRT--KGDTEV--RKKYSHVDLITMIDGVDSEAGAIVAGGR 137
GN L SV + ++ED N ++ K D E ++ S+ ++ + VD+E G +AG R
Sbjct: 115 GNILDKSVFIHDDEDNNPVITQTEKRDKEFWPKELLSYDQVLDKLGVVDTERGTKIAGHR 174
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
GYFL+G V L L++YA+ + YT + TPF M +E M++ +QL+ FD++LYK+ G
Sbjct: 175 GYFLRGAGVVLTQSLIRYAMDFLRKSDYTLIQTPFMMSRESMKKTSQLSDFDDQLYKIDG 234
Query: 198 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---- 253
+D YLIATSEQP+ A H WL E+ LPI+Y G STCFR+E
Sbjct: 235 T--------------NDLYLIATSEQPLSAQHEGEWLKESELPIKYCGYSTCFRKEAGAH 280
Query: 254 -----------------------------------DLTKS------IAYRVVNIVSGALN 272
D +K+ ++YRVV+IVSGALN
Sbjct: 281 GKDNRGIFRVHQFEKIEQFLITSPEESENEFNKMVDRSKAFYDSLGLSYRVVSIVSGALN 340
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
+AAA K DLEA FP S +RELVSCSNC DYQSR L VRY + EK +FVHMLN T
Sbjct: 341 NAAAIKYDLEALFPASQRYRELVSCSNCTDYQSRDLNVRYRPNESTEEK-QFVHMLNGTL 399
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
CA R +C ++E +QTE G+ +P+ L VP YV E+ IPFV+
Sbjct: 400 CAIQRTLCCLVENYQTEGGLIVPEVL---VP--YVGESF-IPFVR 438
>gi|160331655|ref|XP_001712534.1| sys1 [Hemiselmis andersenii]
gi|159765983|gb|ABW98209.1| sys1 [Hemiselmis andersenii]
Length = 428
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 221/441 (50%), Gaps = 91/441 (20%)
Query: 3 LDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSK 62
+++ FR + P+ R +QK R K+ ++D+ I D+ W++ ++K D KF N S+
Sbjct: 1 MEIKSFRLGENIFPDIFRGSQKRRNKDKSVIDQSIILDIYWKKTKYKFDFSKKFLNHTSR 60
Query: 63 VIGEKMKAK--------------------------EPVGDSSTLPGNHLHPSVPVSNNED 96
+IG+ K E ++++L GN +H SV + N
Sbjct: 61 LIGKFQNIKKLFLFPKLIFLKKKILGLEKIYQIFQEKKTETTSLIGNLIHTSVSLGKNAK 120
Query: 97 ENGIVRTKGDTEVRK---KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
+ K + ++ KY+HV+L+ +I VD + G +G RGYFLKG + L L+
Sbjct: 121 LVCLKIQKNFSRSKRYVIKYNHVELLKLIGAVDYDRGIKTSGNRGYFLKGIGLLLNNALI 180
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
+Y L +++ + L TPFFM K ++ + +QL F E+LY + +GE
Sbjct: 181 RYGLDFLVKRNFIALQTPFFMNKNLLSKCSQLEDFKEQLYG-LNQGE------------- 226
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------------- 253
DK+LIATSEQPI H D + P++Y+G S+CFR+E
Sbjct: 227 DKFLIATSEQPISVFHLDETIENGKFPLKYVGFSSCFRKESGSHGKDTSGLFRVHQFEKV 286
Query: 254 --------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDLEAWFP 286
D +S I ++ +NI S +LN+ A+KK+DL +FP
Sbjct: 287 EQFILCSSDYLESWVFFNEMLENVKFFYSSINIPFKFLNIASNSLNNTASKKIDLLGFFP 346
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
S FRELVSCSNC YQS+++ ++ ++K N + HMLN+T CATTRVIC ILE
Sbjct: 347 KSNTFRELVSCSNCTSYQSKKINIKVKPSQK-NPGNNYPHMLNSTLCATTRVICCILENF 405
Query: 347 QTETGVRIPDCLRKFVPAVYV 367
QTE+G+ IP LR +V +V
Sbjct: 406 QTESGIIIPSILRNYVGISFV 426
>gi|200970|gb|AAA40108.1| transfer RNA-Ser synthetase [Mus musculus]
Length = 283
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/287 (45%), Positives = 170/287 (59%), Gaps = 59/287 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK----- 55
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 56 --------------------------FKNLCSKVI-----------------------GE 66
F +L + + GE
Sbjct: 61 SKTIGEKMKKKEAVGDDESVPENVLNFDDLTADALRALKVSQIKKVRLLIDEAIQKCDGE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG G +G V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSPGVLPEGALVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDS 232
+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD+
Sbjct: 241 SQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDA 283
>gi|71004692|ref|XP_757012.1| hypothetical protein UM00865.1 [Ustilago maydis 521]
gi|46096706|gb|EAK81939.1| hypothetical protein UM00865.1 [Ustilago maydis 521]
Length = 440
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 166/431 (38%), Positives = 217/431 (50%), Gaps = 95/431 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVI---------ENDL----------- 41
++DL L + +KGG+P+ V+ +QK R + ELVD+V+ + DL
Sbjct: 1 MIDLLLLQPDKGGNPQLVKDSQKKRNASEELVDEVLALYKNWVSLQKDLDVARRDVNAVQ 60
Query: 42 ----KWRQFRHKAD-NFNKFKNLCSKVIGEK---MKAKEPVGDSSTLPGNHLHPSVPVSN 93
K R+ + AD K K L +KV K + A++ + + GN + VP+SN
Sbjct: 61 AEITKLRKAKENADEQMAKKKELDAKVNQLKPTVVAAEQEMKTKAMQIGNIVGDKVPISN 120
Query: 94 NEDENGIVR----TKGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
ED+N +R + +V KK SH +++ ++ D+E G ++G RG+FL G V
Sbjct: 121 TEDDNAELRKWHPDGPNAQVEKKEGILSHHEVMYRLELFDTERGTKISGHRGFFLTGDGV 180
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L L+ Y L +K Y + TPF MRKEVM + AQL QFDEELYKV G
Sbjct: 181 DLNQALINYGLDFLRKKDYKKIMTPFMMRKEVMAKTAQLDQFDEELYKVTG--------- 231
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQE----------- 253
DE DDKYLIATSEQPI A+H D P LPIRY G STCFR+E
Sbjct: 232 ---DE-DDKYLIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEAGSHGKDTWGI 287
Query: 254 ---------------------DLTK-------------SIAYRVVNIVSGALNHAAAKKL 279
D+ + + Y VV IVSGALN+AAA K
Sbjct: 288 FRVHQFEKVEQFCITDPASSWDMLEQMLANSEEFYQSLQLPYHVVAIVSGALNNAAAMKY 347
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLEAWFP G ++ELVSCSNC DYQSRRL VR G K + K FVHMLN +A R +
Sbjct: 348 DLEAWFPFQGEYKELVSCSNCTDYQSRRLDVRCGFKKPGDTKQTFVHMLNESALLRGREL 407
Query: 340 CAILETHQTET 350
T + T
Sbjct: 408 ADSRGTQDSPT 418
>gi|399218819|emb|CCF75706.1| unnamed protein product [Babesia microti strain RI]
Length = 448
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 214/444 (48%), Gaps = 91/444 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+++FR +G + ++ ++ R ++ V V+E D++WR+ K N
Sbjct: 1 MVLDINIFRCPEGLNA--IKNSEYARGRDDTNVRLVVEADIEWRKADFDLSQLKKDVNSL 58
Query: 61 SKVIGEKMKAKEPVGDSSTLP-------------------------------GNHLHPSV 89
+K I K P + S L GN + +V
Sbjct: 59 NKQIAILKKQNAPESEISPLIANCETKRNAIISLTTNEHNTKKLRDNILQKIGNIICKTV 118
Query: 90 PVSNNEDENGIVRT---KGDTEVR---KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
P+ +E +N ++RT GD + + H +++ +D +D + GA +AG RGYFLKG
Sbjct: 119 PIGTDESKNSVIRTWFPNGDPTTKTNTRILQHHEILKKLDSLDLKKGAEIAGHRGYFLKG 178
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
L L+ Y LS +KGY P+ TP M+K +M E A+L+ F E LY +
Sbjct: 179 FGCLLNNALISYGLSFLSKKGYIPIRTPVLMKKTIMAECAELSDFAETLYCIPSN----H 234
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKSI---- 259
D E DE ++ YLIATSEQP+ A+HR+ L LP++Y G+S CFR+E I
Sbjct: 235 DGNVENDERENLYLIATSEQPLTALHRNETLNGKKLPLKYAGISPCFRKEAGAHGIDTRG 294
Query: 260 -----------------------------------------AYRVVNIVSGALNHAAAKK 278
YR+V+IV+ ALN+AA+KK
Sbjct: 295 IFRVHNFDKVEQFCITSCENSEEMHQEMIKVSEEFYQSLMLPYRIVSIVASALNNAASKK 354
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLE WFPG +RELVSCSNC DYQS + +Y ++ ++VHMLN T AT R
Sbjct: 355 YDLEVWFPGYNNYRELVSCSNCTDYQSVSVKTKYTTSQGTK---KYVHMLNGTLVATQRC 411
Query: 339 ICAILETHQTETGVRIPDCLRKFV 362
ICAI+E Q E GVRIP L ++
Sbjct: 412 ICAIVENFQDENGVRIPPVLVPYM 435
>gi|91287|pir||A41019 serine-tRNA ligase (EC 6.1.1.11) - mouse (fragment)
Length = 284
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 131/288 (45%), Positives = 170/288 (59%), Gaps = 60/288 (20%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNK----- 55
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 56 --------------------------FKNLCSKVI-----------------------GE 66
F +L + + GE
Sbjct: 61 SKTIGEKMKKKEAVGDDESVPENVLNFDDLTADALRALKVSQIKKVRLLIDEAIQKCDGE 120
Query: 67 KMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGV 125
++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG
Sbjct: 121 RVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF 180
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
+ E GA+VAG G +G V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL
Sbjct: 181 EGEKGAVVAGSPGVLPEGALVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQL 240
Query: 186 A-QFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDS 232
+ QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD+
Sbjct: 241 SQQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDA 284
>gi|440474901|gb|ELQ43616.1| seryl-tRNA synthetase [Magnaporthe oryzae Y34]
Length = 455
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 162/440 (36%), Positives = 226/440 (51%), Gaps = 98/440 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL- 59
MVLD+ F TE+GG+PEK+R++Q+ R VE+VD++I R+ ++ A N N
Sbjct: 1 MVLDVTDFITERGGNPEKIRESQRRRHAPVEVVDEIIAMWDDHRRTQYAATQMNAQINDV 60
Query: 60 -------------CSKVIGEKM---KAKEPVGDSS-----------TLPGNHLHPSVPVS 92
S+ + EK+ KAK+ + DS+ T GN +H SVPVS
Sbjct: 61 QKKIGAKKKAKEDASEFLQEKIALEKAKKELIDSAAEKQKILDKKLTTIGNIVHDSVPVS 120
Query: 93 NNEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
+NED N I+RT +G T E R+ SH +++T +DG D + G G RGYFL+ V L
Sbjct: 121 DNEDNNEIIRTYCPEGLTVEKRECLSHHEVLTRLDGYDPDRGIKAVGHRGYFLRQWGVFL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
++ + L K + PL PFF+ K+ M + AQL QFDEELYKV+ GE
Sbjct: 181 NQAIINFGLEFLSSKSFVPLQPPFFLLKDQMSKTAQLEQFDEELYKVVD-GEA------- 232
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DLTKSI--- 259
DKYLIATSEQPI H + WL LP+RY G STCFR+E D+ +
Sbjct: 233 -----DKYLIATSEQPISVYHANEWLLPQDLPLRYAGYSTCFRKEAGGHGRDVWGTFRVH 287
Query: 260 ---------------AYRVVN-IVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDY 303
++ + + +++ + A L W G ++ELVSCSNC
Sbjct: 288 QFEKVEQFCITEPEKSWEMFDEMIANSEEFYKALGLPYLTW---KGEYKELVSCSNC--- 341
Query: 304 QSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVP 363
TKK E+VH LN+T AT+R +CA+LE +QTE G ++P+ LRK++P
Sbjct: 342 -----------TKK-----EYVHCLNSTLTATSRTMCALLENYQTEDGFKVPEPLRKYLP 385
Query: 364 AVYVNEAGE-IPFVKTAPID 382
A E IPF K P D
Sbjct: 386 G-----APEFIPFTKELPKD 400
>gi|300708459|ref|XP_002996408.1| hypothetical protein NCER_100508 [Nosema ceranae BRL01]
gi|239605708|gb|EEQ82737.1| hypothetical protein NCER_100508 [Nosema ceranae BRL01]
Length = 427
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 221/449 (49%), Gaps = 120/449 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKF----- 56
++D++L R K E V +++K RFKN + ++++ + D +F + DN NK
Sbjct: 1 MIDINLLRDPKT--RELVIESEKKRFKNTDNIEEIYKKDQLRIKFNFELDNTNKKKNEIK 58
Query: 57 --------------KNLCSKVIGEKMKAKEPVG-----DSSTLP----------GNHLHP 87
K L +I EK+K E + STL GN L
Sbjct: 59 KKISQIYKENKKEGKELAKDLI-EKLKLIEKSCFELEVEVSTLDEEIKKMLKVVGNILDS 117
Query: 88 SVPVSNNEDENGIVRT----------KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGR 137
SV VSNNE +N ++R K TE+ +KY+H S AGA + G R
Sbjct: 118 SVVVSNNERDNKLIRQFRTNRVIQNKKNYTELMQKYTH-----------SVAGAKIIGHR 166
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
GYFL G L + L +YA+ ++GYT + TP MRK+VM + AQ+ FDE+LYKV
Sbjct: 167 GYFLSGKIAKLGMALSRYAIDFLEKQGYTFIQTPVMMRKDVMSKTAQIGDFDEQLYKV-- 224
Query: 198 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----- 252
DD YLIATSEQP+ A+H D + ++ LP Y G S CFR+
Sbjct: 225 --------------EDDLYLIATSEQPLSALHMDERMVDSDLPKLYCGQSLCFRKEAGAH 270
Query: 253 --------------------------------------EDLTKS--IAYRVVNIVSGALN 272
E+ KS I+Y VV+IVSG N
Sbjct: 271 GKDNSGIFRVHQFEKIEQFVICKPEESKEYFYKMIGLSEEFYKSLDISYNVVSIVSGEFN 330
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
AA+ K DLEA+FP + +RELVSCSNC DYQSR L VRYG K+ N+K +VHMLN+T
Sbjct: 331 DAASIKYDLEAFFPNADKYRELVSCSNCTDYQSRELNVRYGVLKENNKK-GYVHMLNSTL 389
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKF 361
CA R +C ++E +Q + + +P+ LRK+
Sbjct: 390 CAVQRTLCCVVENYQQDDKIIVPEVLRKY 418
>gi|442751401|gb|JAA67860.1| Putative seryl-trna synthetase [Ixodes ricinus]
Length = 163
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/141 (75%), Positives = 119/141 (84%), Gaps = 3/141 (2%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YRVV+IVSGALN+AAAKK DLEAWFP SGAFRELVSCSNCLDYQSRRLL+RYGQTKKM
Sbjct: 18 IPYRVVSIVSGALNNAAAKKHDLEAWFPASGAFRELVSCSNCLDYQSRRLLIRYGQTKKM 77
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N + E+VHMLNAT CA TRVICAILE HQTETGV +P+ LR F+P + IPFVK
Sbjct: 78 NAQTEYVHMLNATMCAVTRVICAILENHQTETGVVVPEALRPFMPPAFRE---PIPFVKP 134
Query: 379 APIDEEETKKQKKQKEGMKKK 399
AP+DE ETKKQ+K +EGM+KK
Sbjct: 135 APVDEAETKKQRKHREGMEKK 155
>gi|156064361|ref|XP_001598102.1| hypothetical protein SS1G_00188 [Sclerotinia sclerotiorum 1980]
gi|154691050|gb|EDN90788.1| hypothetical protein SS1G_00188 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 598
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 223/476 (46%), Gaps = 142/476 (29%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL-- 59
+LD++ F TE+GG+P+ ++ +Q+ R+ E VD+VI R+ ++ A N N
Sbjct: 167 MLDVNDFITERGGNPQAIKDSQRRRYAPEEAVDEVIALYEDHRKTQYAATQVNSKINETQ 226
Query: 60 ------------CSKVIGEKM---KAKEPVGDSS-----------TLPGNHLHPSVPVSN 93
++++ +K K K+ D++ + GN +H SVPV+N
Sbjct: 227 KAIGAKKKAKEDATELLQQKADLEKEKKTWLDAAAEKEIILKKKISTIGNIVHESVPVNN 286
Query: 94 NEDENGIVRT---KGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+ED N ++RT +G T E + SH +++T +DG D E G V
Sbjct: 287 DEDHNELLRTWAPEGVTVEKKDVLSHHEVLTRLDGYDPERGVKV---------------- 330
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
AQL QFDEELYKV+ +
Sbjct: 331 --------------------------------TAQLEQFDEELYKVV-----------DG 347
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D +DKYLIATSEQPI A H D WL +PIRY G S+C+R+E
Sbjct: 348 DAQNDKYLIATSEQPISAFHADEWLTAKDVPIRYAGFSSCYRREAGSHGRDAWGIFRVHQ 407
Query: 254 ----------DLTKS-------------------IAYRVVNIVSGALNHAAAKKLDLEAW 284
D KS + YRVV IVSGALN+AAAKK DLEAW
Sbjct: 408 FEKIEQFVLTDPEKSWEEFDRMISFSEEFYQSLGVPYRVVAIVSGALNNAAAKKYDLEAW 467
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G ++ELVSCSNC DYQSR L +RYG + + ++VH LN+T CAT R +C +LE
Sbjct: 468 FPFQGEYKELVSCSNCTDYQSRALEIRYGTKTQTEIRKKYVHALNSTLCATERALCCLLE 527
Query: 345 THQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQKEGMKKK 399
QTE G +P+ LRK++P A E I F K P D K + K + K K
Sbjct: 528 NFQTEEGFNVPEPLRKYLPG-----APEFIAFSKELPKDTTSQKAKGKVDKAPKPK 578
>gi|432328603|ref|YP_007246747.1| seryl-tRNA synthetase [Aciduliprofundum sp. MAR08-339]
gi|432135312|gb|AGB04581.1| seryl-tRNA synthetase [Aciduliprofundum sp. MAR08-339]
Length = 439
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 215/461 (46%), Gaps = 119/461 (25%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D+ + RT +P+ +R++ + RF++ +VD++++ D WR+ + + +N S
Sbjct: 1 MIDIKIIRT----NPDAIREHLRKRFEDPGVVDEILKYDRMWRESLKEIEALRHERNEKS 56
Query: 62 KVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVPVS 92
IG+ K+ +G LP N L PV
Sbjct: 57 VEIGKMKKSGGDIGPLKERMKEINARIKELEEKVQQYKEKRDYLLMRLP-NILMEDTPVC 115
Query: 93 NNEDENGIVRTKGDTEV---------------------RKKYSHVDLITMIDGVDSEAGA 131
NE+ + ++R G ++ + SHVD++ D D E
Sbjct: 116 ENEENSPVLRVWGRAKILDGTLENFRRWAPNMDFEIVENRPESHVDILDKYDLADIERAG 175
Query: 132 IVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEE 191
VAG R Y+LK V L++ L+++AL +EKGYTP+ P +R+E M+ V + F+E
Sbjct: 176 KVAGARFYYLKNKLVLLELALIRFALDIMVEKGYTPVSPPLMIRREAMEGVTDFSAFEEM 235
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
+YK+ G +D Y+IAT+E P+ A+H L E LPI+Y+G+S CFR
Sbjct: 236 IYKIDG---------------EDLYMIATAEHPLVAMHMKEILEEKDLPIKYVGISPCFR 280
Query: 252 QE-----DLTKSI----------------------------------------AYRVVNI 266
+E TK I YRV+NI
Sbjct: 281 KEAGAHGKDTKGIFRVHNFYKVEQVIFSKPEESPSLMEELVGNAEEIIQKLELPYRVINI 340
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVH 326
SG L AAKK D+E W P FRE+VSCSNCL+YQSRRL +RY +M +FVH
Sbjct: 341 CSGELGAVAAKKYDIEVWMPAQQKFREVVSCSNCLEYQSRRLKIRYRHKGEM----KFVH 396
Query: 327 MLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 367
LN+TA ATTR++ AI+E Q + G+RIP L + Y+
Sbjct: 397 TLNSTALATTRIMVAIIENFQEDKGIRIPKALVPYTGFEYI 437
>gi|384500248|gb|EIE90739.1| seryl-tRNA synthetase [Rhizopus delemar RA 99-880]
Length = 422
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 219/420 (52%), Gaps = 53/420 (12%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++L ++GG PE ++++Q+ VE++D+VI W + +D NK N
Sbjct: 1 MLDINLLLEDRGGIPEAIKESQRRHSAPVEIIDEVIAEYKAWTTTQFDSDQKNKEMNALQ 60
Query: 62 KVIGEKMKAKE-PVG---------------------------DSSTLPGNHLHPSVPVSN 93
K IG+K K+KE P G + L N +H SVP S
Sbjct: 61 KEIGKKYKSKEDPSGLLAKKAELQKDKEELVAKAKEQEISWKNKLNLLRNIVHDSVPTSM 120
Query: 94 NEDENGIVRT---KGDTEVRKK--YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
++D N I+RT G V+K SH +++T +DG D E GA VAG RGYFL V L
Sbjct: 121 DKDNNEIIRTYFHNGIEPVKKTDILSHHEVLTRLDGYDQERGAKVAGHRGYFLASVGVDL 180
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV---IGKGEKVGDS 205
+ L++Y L+ G+ L TPFFM K+++ + AQL+QFDEELYK+ + E
Sbjct: 181 NLALIRYGLNFLDRHGHKKLQTPFFMNKDMIAKTAQLSQFDEELYKINILYMQSEICTCW 240
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWL-------PEASLPI--RYLGVSTCFRQEDLT 256
+ L+ I VH+ + PE S + + S F Q +
Sbjct: 241 VTLPVSVRKLVLMVRIPGGIFRVHQFEKIEQFVLTAPEKSWEMFNEMIEHSEEFFQ---S 297
Query: 257 KSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK 316
++YRVV IVSGALN+AAAKK DLEAWFP G ++ELVSCSN DYQSR L +R K
Sbjct: 298 LGLSYRVVAIVSGALNNAAAKKYDLEAWFPYQGEYKELVSCSNRTDYQSRNLEIRCSVKK 357
Query: 317 KMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 376
+ + + V LN+T CAT R CA+LE+ Q E G+ IP L VP Y++ IP++
Sbjct: 358 MSDREKKHVRCLNSTLCATERATCALLESWQREDGLEIPPPL---VP--YMDGQTFIPYI 412
>gi|19074152|ref|NP_584758.1| SERYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
gi|74697584|sp|Q8SS48.1|SYS_ENCCU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|19068794|emb|CAD25262.1| SERYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
Length = 429
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 211/438 (48%), Gaps = 97/438 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D++L R K EKV +++K RF++ V K E D K + + D N N +
Sbjct: 1 MIDINLIRDPK--TREKVVESEKKRFRDGLAVGKAYELDRKRIEMNFRLDQINTRINQLN 58
Query: 62 KVI--GEKMKAKEPVGDSSTLP-------------------------------GNHLHPS 88
+ I G + + GD S GN + PS
Sbjct: 59 REIKSGYRQGKNKEDGDLSEKVAEIKGLSDEAKGLRDDVKAVEDELNKVMKGIGNIISPS 118
Query: 89 VPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
V VSN+E +N IVR+ + +K + M D S AGA V G RGY+L G L
Sbjct: 119 VVVSNDEKDNPIVRSYRSSRNMQKNPRPFCVLMKDFTHSVAGAKVMGHRGYYLSGKMARL 178
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
L +YA+ KGYT + TP +R++VM++ +QL+ FD++LYKV
Sbjct: 179 AQALTRYAIDFLENKGYTYIQTPVMLRRDVMRKTSQLSDFDDQLYKV------------- 225
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
DD YLIATSEQ + A++ D + +P ++ G S CFR+E
Sbjct: 226 ---EDDLYLIATSEQSLAALYMDERMVPQEVPKKFCGQSLCFRKEAGAHGKDNAGLFRVH 282
Query: 254 ---------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEA 283
++ K+ I+Y VV IVSG LN AAA K DLEA
Sbjct: 283 QFEKIEQFVICGPEESQKYHEEMIKACEEFYQSLDISYNVVGIVSGELNDAAAIKYDLEA 342
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
+FP + +RELVSCSNC DYQSR L +RYG K+ N KI +VH+LN T CA R +C I+
Sbjct: 343 YFPSAEKYRELVSCSNCTDYQSRELEIRYGVVKENNRKI-YVHLLNGTMCAVQRALCCIV 401
Query: 344 ETHQTETGVRIPDCLRKF 361
E +QT G+ IPD L+ +
Sbjct: 402 ENYQTGDGIAIPDVLQGY 419
>gi|449328955|gb|AGE95230.1| seryl tRNA synthetase [Encephalitozoon cuniculi]
Length = 429
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 211/438 (48%), Gaps = 97/438 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D++L R K EKV +++K RF++ V K E D K + + D N N +
Sbjct: 1 MIDINLIRDPK--TREKVVESEKKRFRDGLAVGKAYELDRKRIEMNFRLDQINTRINQLN 58
Query: 62 KVI--GEKMKAKEPVGDSSTLP-------------------------------GNHLHPS 88
+ I G + + GD S GN + PS
Sbjct: 59 REIKSGYRQGKNKEDGDLSEKVAEIKGLSDEAKGLRDDVKAVEDELNKVMKGIGNIISPS 118
Query: 89 VPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
V VSN+E +N IVR+ + +K + M D S AGA V G RGY+L G L
Sbjct: 119 VVVSNDEKDNPIVRSYRSSRNMQKNPRPFCVLMKDFTHSVAGAKVMGHRGYYLSGKMARL 178
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
L +YA+ KGYT + TP +R++VM++ +QL+ FD++LYKV
Sbjct: 179 AQALTRYAIDFLENKGYTYIQTPVMLRRDVMRKTSQLSDFDDQLYKV------------- 225
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
DD YLIATSEQ + A++ D + +P ++ G S CFR+E
Sbjct: 226 ---EDDLYLIATSEQSLAALYMDERMVPQEVPKKFCGQSLCFRKEAGAHGKDNAGLFRVH 282
Query: 254 ---------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEA 283
++ K+ I+Y VV IVSG LN AAA K DLEA
Sbjct: 283 QFEKIEQFVICGPEESQKYHEEMIKACEEFYQSLDISYNVVGIVSGELNDAAAIKYDLEA 342
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
+FP + +RELVSCSNC DYQSR L +RYG K+ N KI +VH+LN T CA R +C I+
Sbjct: 343 YFPSAEKYRELVSCSNCTDYQSRELEIRYGVVKENNRKI-YVHLLNGTMCAIQRALCCIV 401
Query: 344 ETHQTETGVRIPDCLRKF 361
E +QT G+ IPD L+ +
Sbjct: 402 ENYQTGDGIAIPDVLQGY 419
>gi|240104000|ref|YP_002960309.1| seryl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|259516204|sp|C5A226.1|SYS_THEGJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|239911554|gb|ACS34445.1| Seryl-tRNA synthetase (serS) [Thermococcus gammatolerans EJ3]
Length = 455
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 149/459 (32%), Positives = 218/459 (47%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R + PE V+K+ ++ + V+ +D+++E D KWR+ K + K +N
Sbjct: 1 MLDIKLIREK----PELVKKDLIKRGETEKVKWIDEILELDRKWRENLKKINQLRKERNQ 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ KA EP+ D LP N H SVP
Sbjct: 57 LAVQIGKRKKAGEPIEDLLARSNEIVKQIEELEKEVEALKKKIDYYLWRLP-NITHESVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
V ++ EN +R G +V + + HVD++ ++ G D E
Sbjct: 116 VGKDDTENVPIRFWGKAKVWEGFLESFKEQSLGKMDYEVLSWRPRLHVDMLELLRGADLE 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL + IEKG+TP+ P+ +R+ V + F
Sbjct: 176 RAAKVSGSRFYYLLNELVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGATTFEDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV G +D YLI T+E P+ +H + L LP+ Y+GVS
Sbjct: 236 EDVIYKVEG---------------EDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIANAEELFQELEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW G G FRE+VS SNC D+Q+RRL +R+ K +EK +
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMAGQGKFREVVSASNCTDWQARRLNIRF--RDKTHEKPK 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
FVH LN+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 399 FVHTLNSTAIATSRAIVAILENHQTEEGVVKLPKALWKY 437
>gi|443918059|gb|ELU38641.1| seryl-tRNA synthetase [Rhizoctonia solani AG-1 IA]
Length = 381
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 191/388 (49%), Gaps = 98/388 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ F EKGGDPE ++++Q+ R +VELVD+VI W + + +A+ K N
Sbjct: 1 MTLDVTSFIVEKGGDPEVIKESQRKRGGSVELVDEVIAMYKHWVEAQFEANQVKKQVNAV 60
Query: 61 SKVIGEKMKAKEPVGD----------------------------SSTLPGNHLHPSVPVS 92
K I K KAKEP + + GN ++ VP+S
Sbjct: 61 QKEITAKRKAKEPFDEFLEQKNKLEAQVAEMEKAVDEEERVMRAKAATIGNLVNKGVPIS 120
Query: 93 NNEDENGIVRT----KGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
ED+N +++T + +V KK +H +++ I D+E G+ VAG RG+FL
Sbjct: 121 QTEDDNKVLKTWHPDGPNAQVEKKSDILAHHEVMIRIGAFDTERGSKVAGHRGFFLTEDG 180
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
V L L+ Y L ++GY + PFFMRK+ M + AQL QFDEELYKV G GE
Sbjct: 181 VDLNQALINYGLDFLRKRGYKKIQPPFFMRKDAMAKTAQLDQFDEELYKVSGDGE----- 235
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQED--------- 254
DKYLIATSEQPI A H D PE L Y G STCFR+E
Sbjct: 236 --------DKYLIATSEQPISAFHSDELFDQPEKQL---YAGYSTCFRKEAGAAGRDTWG 284
Query: 255 --------------LTK----------------------SIAYRVVNIVSGALNHAAAKK 278
+T+ I Y+VV IVSGALN AA++K
Sbjct: 285 IFRVHQFEKVEQFCITQPEHSWEMFEHMVENAEAFYQSLKIPYQVVAIVSGALNLAASQK 344
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSR 306
DLEAWFP GA++ELVSCSNC DY+ R
Sbjct: 345 YDLEAWFPFQGAYKELVSCSNCTDYRER 372
>gi|212224239|ref|YP_002307475.1| seryl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|229470724|sp|B6YWW5.1|SYS_THEON RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|212009196|gb|ACJ16578.1| Seryl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 457
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 217/459 (47%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R +P+ V+ + ++ + ++ +D+++E D KWR+ K + K +N
Sbjct: 1 MLDIKLIRE----NPDLVKGDLIKRGEIEKIKWIDEILELDKKWRENLRKINQLRKERNQ 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ KA EP+ D LP N H SVP
Sbjct: 57 LAVQIGKRKKAGEPIDDLLAKSNEIVKQIETLEKEVEELRAKIDYYLWRLP-NITHESVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
+ ++ EN +R G +V + + HVD++ ++ G D E
Sbjct: 116 IGKDDSENVPIRFWGKAKVWEGFLETFKEQSLGKMDYEVIDWRPRLHVDMLEILRGADIE 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL K IEKG+ P+ P+ +R+ V + V F
Sbjct: 176 RAAKVSGSRFYYLLNELVILDLALIRFALDKLIEKGFIPVIPPYMVRRYVEEGVTSFGDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV G +D YLI T+E P+ +H + L LP+ Y+G+S
Sbjct: 236 EDVIYKVEG---------------EDLYLIPTAEHPLAGMHANEILEGKDLPLLYVGISP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKLIQNAEEIFQELEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW G G FRE+VS SNC ++Q+RRL +RY K +EK +
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMAGQGKFREVVSASNCTEWQARRLNIRY--RDKTHEKPK 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
FVH LN+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 399 FVHTLNSTAIATSRAIVAILENHQTEEGVVKLPKVLWKY 437
>gi|223477678|ref|YP_002582329.1| seryl-tRNA synthetase [Thermococcus sp. AM4]
gi|214032904|gb|EEB73732.1| Seryl-tRNA synthetase [Thermococcus sp. AM4]
Length = 455
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 149/459 (32%), Positives = 219/459 (47%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R + PE V+K+ ++ + V+ +D+++E D KWR+ K + K +N
Sbjct: 1 MLDIKLIREK----PELVKKDLLKRGETEKVKWIDEILELDRKWRENLKKINQLRKERNQ 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ KA EPV + LP N H SVP
Sbjct: 57 LAVQIGKRKKAGEPVEELLARSNEIVKQIEELEREVEELRKKIDYYLWRLP-NITHESVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
V ++++N +R G +V + + HVD++ ++ G D E
Sbjct: 116 VGESDEDNVPIRFWGKAKVWEGFLETFKEQSLGKMEYELLSWRPRLHVDMLELLRGADLE 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL K IEKG+TP+ P+ +R+ V + F
Sbjct: 176 RAAKVSGSRFYYLLNELVILDLALIRFALDKLIEKGFTPVIPPYMVRRFVEEGATTFDDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV G +D YLI T+E P+ +H + L LP+ Y+GVS
Sbjct: 236 EDVIYKVEG---------------EDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIANAEEIFQELEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW G G FRE+VS SNC D+Q+RRL +R+ K +EK +
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMAGQGKFREVVSASNCTDWQARRLNIRF--RDKTHEKPK 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
FVH LN+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 399 FVHTLNSTAIATSRAIVAILENHQTEEGIVKLPKALWKY 437
>gi|399949631|gb|AFP65289.1| seryl-tRNA synthetase (serin-tRNA ligase) [Chroomonas
mesostigmatica CCMP1168]
Length = 434
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 215/452 (47%), Gaps = 96/452 (21%)
Query: 3 LDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSK 62
+++ L R K + R +QK R ++ +VD+ + D +W++ +HK D N SK
Sbjct: 1 MEIKLLRLGKKNYSDIARGSQKRRQEDKSIVDQTLILDNEWKKIKHKFDFSKGHLNKISK 60
Query: 63 VIGEKMKAKEPVGDSSTLP--------------------------GNHLHPSVPVSNNED 96
VI + + L GN +H N
Sbjct: 61 VIKNHKEVYVSCFIFNLLAFKKKILKIEKLAVFYEKKREKTIIQIGNIIHNCASFGNQGK 120
Query: 97 EN--GIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
+ + R + + HV+L+ I V+ E G ++G RGYFLKG + + L++
Sbjct: 121 NSRLDLSRKIIKKKAQNLLGHVELLEKIGAVEYEKGINISGNRGYFLKGVGLLINNALIR 180
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
Y+L I+K + L TPFFM K+++ + +QL F E+LY + E ++
Sbjct: 181 YSLDFLIKKNFIALQTPFFMLKKLLMKCSQLEDFKEQLYSL--------------SEEEN 226
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------------- 253
K+LIATSEQPI H + L + LPI+Y+G STCFR+E
Sbjct: 227 KFLIATSEQPITCFHLNETLSKNRLPIKYVGFSTCFRKESGSHGKDTSGIFRVHQFEKVE 286
Query: 254 ------------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPG 287
D SI Y+++NI + ALN++A+KK+DL +FP
Sbjct: 287 QFVICTPENSLSWSYMEELLENVKDFYSSINIPYKIINISTEALNNSASKKIDLLGFFPK 346
Query: 288 SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
S F+ELVSCSNC +QS RL ++ K+ NE+I F HMLN+T CAT+RVIC I E +Q
Sbjct: 347 SDTFKELVSCSNCTGFQSERLKIK-TNLKRKNEEITFPHMLNSTLCATSRVICCIAENYQ 405
Query: 348 TETGVRIPDCLRKFVPAVYVNEAGEIPFVKTA 379
T +G+ +P+ LR + +V PF K++
Sbjct: 406 TISGIIVPNVLRNYTGLSFV------PFKKSS 431
>gi|409095085|ref|ZP_11215109.1| seryl-tRNA ligase [Thermococcus zilligii AN1]
Length = 455
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/459 (31%), Positives = 216/459 (47%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R +P+ VR + ++ + ++ +D+++E D +WR+ K + K +N
Sbjct: 1 MLDIKLIRE----NPDLVRGDLIKRGELEKLKWIDEILELDARWRENLRKINQLKKERNQ 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ A EPV D LP N H SVP
Sbjct: 57 LAIEIGKRKNAGEPVDDLLARSDEIAKQIEGLEKEVEELEKRINYYLWRLP-NITHESVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKY----------------------SHVDLITMIDGVDSE 128
V ++++N +R G +V + + HVD++ ++ G D E
Sbjct: 116 VGKSDEDNVPIRFWGRAKVWEGFLESFKEQSLGKMEYELLSWRPRIHVDMLELLKGADLE 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL K IEKG+TP+ P+ +R+ V + F
Sbjct: 176 RAAKVSGARFYYLLNELVILDLALIRFALDKLIEKGFTPVIPPYMVRRFVEEGATTFGDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV G +D YLI T+E P+ +H D L LP+ Y+GVS
Sbjct: 236 EDVIYKVEG---------------EDLYLIPTAEHPLAGLHADEILDGNDLPLLYVGVSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIANAEEIFQALEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW G G FRE+VS SNC ++Q+RRL +R+ + NEK
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMAGQGKFREVVSASNCTEWQARRLNIRF--RDRTNEKPR 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
FVH LN+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 399 FVHTLNSTAIATSRAIVAILENHQTEEGVVKLPKALWKY 437
>gi|402468745|gb|EJW03857.1| serine-tRNA ligase [Edhazardia aedis USNM 41457]
Length = 452
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 181/342 (52%), Gaps = 77/342 (22%)
Query: 82 GNHLHPSVPVSNNEDENGIV-RTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN L PSVP+S NED+N +V R + + ++ K ++ ++G D+ G ++G RGYF
Sbjct: 140 GNILKPSVPISKNEDDNALVYRYRSERKLNKTLPFNVIMQKVNGCDTARGTKISGHRGYF 199
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
L+ L + L +YA+ +E+GY + TP F++K+VM + AQL+ FD++LY +G
Sbjct: 200 LQNDIALLGMSLSRYAIDFMMERGYNLMQTPVFIQKDVMAKTAQLSDFDDQLYS-MG--- 255
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------- 253
D+ +LIATSEQP+ A + D P++++G S CFR+E
Sbjct: 256 ------------DEYFLIATSEQPLTAYYSDEI---CKTPVKFVGQSLCFRKEAGAHGKD 300
Query: 254 ------------------------------------DLTKS--IAYRVVNIVSGALNHAA 275
D KS I+Y VV+IVSG LN AA
Sbjct: 301 NHGIFRIHQFEKIEQLVICQDDESDSYFSEMIKNAMDFYKSLDISYNVVSIVSGELNDAA 360
Query: 276 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACAT 335
A K DLEA+FP S FRELVSCSNC DYQSR L VR KK F HMLN T A
Sbjct: 361 AIKYDLEAYFPHSDRFRELVSCSNCTDYQSRDLNVRVSHQKK------FPHMLNCTVAAI 414
Query: 336 TRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
R +C I+E +QT++G+ +PD L+ ++ + IP+V+
Sbjct: 415 QRALCCIVENYQTDSGIEVPDVLKGYMKKDF------IPYVE 450
>gi|57641075|ref|YP_183553.1| seryl-tRNA synthetase [Thermococcus kodakarensis KOD1]
gi|67461627|sp|Q5JE75.1|SYS_PYRKO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|57159399|dbj|BAD85329.1| Seryl-tRNA synthetase [Thermococcus kodakarensis KOD1]
Length = 455
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 218/459 (47%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R +PE V+++ ++ + ++ +D+++E D KWR+ K + K +N
Sbjct: 1 MLDIKLIRE----NPEIVKRDLIKRGETEKLKWIDEILELDKKWRENLKKINQLRKERNQ 56
Query: 60 CSKVIGEKMKAKEPVGDS-----------------------------STLPGNHLHPSVP 90
+ IG++ KA EP+ D LP N H SVP
Sbjct: 57 LAVQIGKRKKAGEPIDDLLKRSNEIVKQIEELEKENEELKKKIDYYLWRLP-NITHESVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
V ++++N +R G +V + + HVD++ ++ G D E
Sbjct: 116 VGESDEDNVPIRFWGKAKVWEGFLETFKEQSLGKMEYEVLSWRPRLHVDMLELLRGADLE 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL K IEKG+TP+ P+ +R+ V + F
Sbjct: 176 RAAKVSGARFYYLLNELVILDLALIRFALDKLIEKGFTPVIPPYMVRRFVEEGATTFDDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV G +D YLI T+E P+ +H + L LP+ Y+GVS
Sbjct: 236 EDVIYKVEG---------------EDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHERIIANAEEIFQALEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW G G FRE+VS SNC D+Q+RRL +R+ K +EK
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMAGQGKFREVVSASNCTDWQARRLNIRF--RDKTHEKPR 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
FVH LN+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 399 FVHTLNSTAIATSRAIVAILENHQTEEGVVKLPKALWKY 437
>gi|315230878|ref|YP_004071314.1| seryl-tRNA synthetase [Thermococcus barophilus MP]
gi|315183906|gb|ADT84091.1| seryl-tRNA synthetase [Thermococcus barophilus MP]
Length = 455
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 216/459 (47%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R +P+ V+ + ++ + ++ +D+++E D KWR+ K + + +N
Sbjct: 1 MLDIKLIRE----NPDIVKGDLIKRGELEKLKWIDEILELDKKWRENLRKINQLRRERNR 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ KA E V D T LP N H SVP
Sbjct: 57 IAVEIGKRKKAGESVDDLLTKSKEIVKQIEILEKENEEIRKKIDFYLWRLP-NITHESVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
+ ++ EN ++ G V K + HVDL+ ++ G D E
Sbjct: 116 IGKDDTENVPIKFWGKARVWKGHLESFLEQSQGKMEYEVLEWKPKLHVDLLEILRGADFE 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL + IEKG+TP+ P+ +R+ V + V F
Sbjct: 176 RAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRYVEEGVTTFDDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
+ +YKV G +D YLI T+E P+ +H + + LP+ Y+GVS
Sbjct: 236 ENVIYKVEG---------------EDLYLIPTAEHPLAGMHANEIIDGKDLPLLYVGVSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKLLQNAEELFQELEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW PG G FRE+VSCSNC D+Q+RRL +R+ K +EK +
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMPGQGKFREVVSCSNCTDWQARRLNIRF--RDKTHEKPK 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
FVH LN+TA AT+R I AILE Q E G VRIP L K+
Sbjct: 399 FVHTLNSTAIATSRAIVAILENFQEEDGTVRIPKALWKY 437
>gi|303388974|ref|XP_003072720.1| seryl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
gi|303301862|gb|ADM11360.1| seryl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
Length = 429
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 212/438 (48%), Gaps = 97/438 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKN-------VELVDKVIENDLKWRQFRHKADNFN 54
++D+ L R EK EKV +++K RF++ EL + IE + + Q + + +
Sbjct: 1 MIDIGLIRDEKS--REKVVESEKKRFRDGTGVERAYELDRRKIETNFRLDQINTRVNQLD 58
Query: 55 K--------FKNLCSKVIGEKMK-AKEPVGDSSTLP-----------------GNHLHPS 88
+ KN +GEK+K K+ G++ L GN + P
Sbjct: 59 REIKSGYKQGKNKEDADLGEKVKEMKDIQGEAKRLKEDVKVIEDELSKVMKGIGNIISPK 118
Query: 89 VPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
V VSN+E +N I+R+ KK + M D EAGA V G RGY+L G L
Sbjct: 119 VVVSNDEKDNEIIRSYRSGRSIKKDPKPFCVLMKDFTHPEAGAKVVGHRGYYLSGKMARL 178
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
L +YA+ KGY + TP ++++VM + +QL+ FD++LYKV
Sbjct: 179 AQALSRYAIDFLENKGYVYIQTPVMLKRDVMGKTSQLSDFDDQLYKV------------- 225
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
DD YL+ATSEQ + A++ D + P ++ G S CFR+E
Sbjct: 226 ---EDDLYLVATSEQSLAALYMDERIVPQETPKKFCGQSLCFRKEAGAHGKDNAGLFRVH 282
Query: 254 ---------------------DLTK---------SIAYRVVNIVSGALNHAAAKKLDLEA 283
++ K I+Y VV+IVSG LN AA K DLEA
Sbjct: 283 QFEKIEQFVICSPEESERHHEEMIKICEEFYQSLDISYNVVSIVSGELNDAAVMKYDLEA 342
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
+FP + +RELVSCSNC DYQSR L +RYG K+ N K+ +VH+LN T CA R +C I+
Sbjct: 343 YFPNAEKYRELVSCSNCTDYQSRELEIRYGIAKENNRKV-YVHLLNGTMCAIQRTLCCIV 401
Query: 344 ETHQTETGVRIPDCLRKF 361
E +Q E G+ IPD L+ +
Sbjct: 402 ENYQNERGISIPDVLQGY 419
>gi|90076434|dbj|BAE87897.1| unnamed protein product [Macaca fascicularis]
Length = 175
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/141 (72%), Positives = 119/141 (84%), Gaps = 3/141 (2%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 18 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 77
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 78 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKP 134
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KKK
Sbjct: 135 APIDQEPSKKQKKQHEGSKKK 155
>gi|337284432|ref|YP_004623906.1| seryl-tRNA synthetase [Pyrococcus yayanosii CH1]
gi|334900366|gb|AEH24634.1| seryl-tRNA synthetase [Pyrococcus yayanosii CH1]
Length = 456
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/485 (31%), Positives = 221/485 (45%), Gaps = 132/485 (27%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R +PE V+ + ++ + V+ +D+++E D WR+ + + +N
Sbjct: 1 MLDIKLIRE----NPEIVKNDLIKRGELEKVKWIDEILELDKAWREKLKEINRLRHERNK 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ KA E V LP N HPSVP
Sbjct: 57 IAIEIGKRRKAGEDVEGLLVKSKEIVARIEDLEKEVEELKRRIDYYLWRLP-NITHPSVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
V +E++N VR G +V K + HVDL+ ++ G D
Sbjct: 116 VGKDENDNVPVRFWGKAKVWKGHLESFLEQSGGKMEYEVLEWKPRLHVDLLELLGGADFA 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL + IEKG+TP+ P+ +R+ V + F
Sbjct: 176 RAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGATTFEDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV G +D YLI T+E P+ +H + L LP+ Y+GVS
Sbjct: 236 EDVIYKVEG---------------EDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKLIANAEELFQALEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW PG G FRE+VS SNC D+Q+RRL +R+ + NEK
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMPGQGKFREVVSASNCTDWQARRLNIRF--RDRTNEKPR 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
+VH LN+TA AT+R I AILE HQ E G VRIP L K+ F + P+D
Sbjct: 399 YVHTLNSTAIATSRAIVAILENHQEEDGTVRIPKVLWKYT-----------GFKEIVPVD 447
Query: 383 EEETK 387
+E +
Sbjct: 448 RKEGR 452
>gi|226358659|gb|ACO51182.1| seryl-tRNA synthetase [Hypophthalmichthys nobilis]
Length = 196
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 128/200 (64%), Gaps = 51/200 (25%)
Query: 170 TPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVH 229
TPFFMRKEVMQEVAQL+QFDEELYKVIGKG + D + +D+KYLIATSEQPI A
Sbjct: 1 TPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDD----NTVDEKYLIATSEQPIAAFL 56
Query: 230 RDSWLPEASLPIRYLGVSTCFRQ------------------------------------- 252
RD WL LPIRY G+STCFRQ
Sbjct: 57 RDEWLKPEDLPIRYAGMSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWEM 116
Query: 253 --------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLD 302
E+ +S I YR+VNIVSGALNHAA+KKLDLEAWFPGS AFRELVSCSNC D
Sbjct: 117 FDEMVGTAEEFYQSLGIPYRIVNIVSGALNHAASKKLDLEAWFPGSQAFRELVSCSNCTD 176
Query: 303 YQSRRLLVRYGQTKKMNEKI 322
YQ+RRL +RYGQTKKM +K+
Sbjct: 177 YQARRLRIRYGQTKKMMDKV 196
>gi|390961750|ref|YP_006425584.1| seryl-tRNA synthetase [Thermococcus sp. CL1]
gi|390520058|gb|AFL95790.1| seryl-tRNA synthetase [Thermococcus sp. CL1]
Length = 455
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 218/459 (47%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R +P+ V+ + ++ + ++ +D+++E D KWR+ K + K +N
Sbjct: 1 MLDIKLIRE----NPDLVKGDLIKRGEIEKLKWIDEILELDRKWRENLRKINTLRKERNQ 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ KA EP+ D LP N H SVP
Sbjct: 57 LAVQIGKRKKAGEPIDDLLARSNEIVKQIEELEKEVEELRKKIDYYLWRLP-NITHESVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
V ++++N +R G +V + + HVD++ ++ G D E
Sbjct: 116 VGESDEDNVPIRFWGKAKVWEGFLESFKEQSLGKMDYEVLSWRPRLHVDMLELLRGADLE 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL K IEKG+ P+ P+ +R+ V + V F
Sbjct: 176 RAAKVSGSRFYYLMNELVILDLALLRFALDKLIEKGFVPVIPPYMVRRFVEEGVTSFGDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV G +D YLI T+E P+ +H + + LP+ Y+GVS
Sbjct: 236 EDVIYKVEG---------------EDLYLIPTAEHPLAGMHANEIIEGKDLPLLYVGVSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKLIANAEEIFQELEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW G G FRE+VS SNC ++Q+RRL +R+ K +EK +
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMAGQGKFREVVSASNCTEWQARRLNIRF--RDKTHEKPK 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
FVH LN+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 399 FVHTLNSTAIATSRAIVAILENHQTEEGVVKLPKALWKY 437
>gi|135172|sp|P26636.1|SYSC_CRIGR RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|553843|gb|AAA37019.1| transfer RNA-Ser synthetase, partial [Cricetulus griseus]
Length = 199
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/141 (72%), Positives = 119/141 (84%), Gaps = 3/141 (2%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 51 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 110
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK
Sbjct: 111 MDKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLREFMPPG-LQEL--IPFVKP 167
Query: 379 APIDEEETKKQKKQKEGMKKK 399
APID+E +KKQKKQ EG KK+
Sbjct: 168 APIDQEPSKKQKKQHEGSKKE 188
>gi|396081219|gb|AFN82837.1| seryl-tRNA synthetase [Encephalitozoon romaleae SJ-2008]
Length = 429
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 209/444 (47%), Gaps = 97/444 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D++L R K E+V +++K RF++ V K E D K + K D N N +
Sbjct: 1 MIDINLIRDPKT--REEVVESEKKRFRDGTAVGKAYELDRKRIETAFKLDQINARVNQLN 58
Query: 62 KVIGEKMK-----------------------AKEPVGDSSTLP----------GNHLHPS 88
+ + K AK DS + GN +
Sbjct: 59 REVKSGYKQGKKKEDEELAKKIDEIKNLYDEAKNLKEDSGRIEEELNKVMKGIGNIISEE 118
Query: 89 VPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
V VSN+E +N IVR+ ++ + M D S AGA V G RGY+L G L
Sbjct: 119 VVVSNDEKDNLIVRSYRSGRSIQRNPQPFSMLMKDFTHSTAGAKVIGHRGYYLSGKMARL 178
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
L +YA+ KGYT + TP +R++VM + +QL+ FD++LYKV
Sbjct: 179 AQALTRYAIDFLENKGYTYIQTPVMLRRDVMAKTSQLSDFDDQLYKV------------- 225
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
DD YLIATSEQ + A++ D + +P + G S CFR+E
Sbjct: 226 ---EDDLYLIATSEQALAALYMDERMIPQEVPKKLCGQSLCFRKEAGAHGKDNAGLFRVH 282
Query: 254 ----------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEA 283
+ +S I+Y VV+IVSG LN AAA K DLEA
Sbjct: 283 QFEKIEQFVICEPSESRKHHEEMIRVCEEFYQSLDISYNVVSIVSGELNDAAAIKYDLEA 342
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
+FP + +RELVSCSNC DYQSR L +RYG K+ N K+ +VH+LN T CA R +C I+
Sbjct: 343 YFPNADKYRELVSCSNCTDYQSRELEIRYGVVKENNRKV-YVHLLNGTMCAIQRALCCIV 401
Query: 344 ETHQTETGVRIPDCLRKFVPAVYV 367
E +Q E GV IPD L+ + A ++
Sbjct: 402 ENYQKENGVGIPDVLQGYFGADFI 425
>gi|440493531|gb|ELQ75988.1| Seryl-tRNA synthetase [Trachipleistophora hominis]
Length = 474
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 179/327 (54%), Gaps = 66/327 (20%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRK--KYSHVDLITMIDGVDSEAGAIVAGGRGY 139
GN LH V VS +E+ N ++ T+ ++ V++ K ++ D++ + VD + G+ V G RGY
Sbjct: 158 GNVLHKDVFVSKDEEHNPVI-TRYESGVKRNGKMAYYDVMERLGCVDMKRGSKVCGHRGY 216
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
FL L+ LV+YA+ KGYT + TP M ++VM + AQL++FDE+LY
Sbjct: 217 FLFEELALLENALVRYAIDFARTKGYTLVQTPVLMNRDVMAKTAQLSEFDEQLYAA---- 272
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
D++YLIATSEQP+ A++ + + LP ++ G S CFR+E
Sbjct: 273 -------------DEQYLIATSEQPLTALYMNERILPEQLPKKFCGQSLCFRREAGAAGK 319
Query: 254 --------------------------DLTKSIA-------------YRVVNIVSGALNHA 274
++ K++ YRVV+IVSG +N +
Sbjct: 320 DNKGIFRVHQFEKIEQFVICAPEKSEEMHKAMLAVSEQFYQSLRLDYRVVSIVSGEMNDS 379
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
A K DLEA+FP S +RELVSCSNC DYQ+R L VRYG TK+ + K+ + HMLN T CA
Sbjct: 380 ACLKYDLEAYFPHSKRYRELVSCSNCTDYQARDLEVRYGITKENDRKV-YCHMLNGTLCA 438
Query: 335 TTRVICAILETHQTETGVRIPDCLRKF 361
R +C ++E +Q E GVR+PD L K+
Sbjct: 439 VQRTLCCLVENYQEEEGVRVPDVLVKY 465
>gi|14590588|ref|NP_142656.1| seryl-tRNA synthetase [Pyrococcus horikoshii OT3]
gi|3257118|dbj|BAA29801.1| 460aa long hypothetical seryl-tRNA synthetase [Pyrococcus
horikoshii OT3]
Length = 460
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 146/459 (31%), Positives = 213/459 (46%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R +PE V+ + ++ + V+ VD++++ D +WR + + +N
Sbjct: 6 MLDIKLIRE----NPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNK 61
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ K EPV + LP N HPSVP
Sbjct: 62 IAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDYYLWRLP-NITHPSVP 120
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
V +E++N +R G V K + HVDL+ ++ G D
Sbjct: 121 VGKDENDNVPIRFWGKARVWKGHLERFLEQSQGKMEYEILEWKPKLHVDLLEILGGADFA 180
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL + IEKG+TP+ P+ +R+ V + F
Sbjct: 181 RAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTSFEDF 240
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV E +D YLI T+E P+ +H + L LP+ Y+GVS
Sbjct: 241 EDVIYKV---------------EDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSP 285
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 286 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIPYRV 345
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW PG G FRE+VS SNC D+Q+RRL +R+ + +EK
Sbjct: 346 VNICTGDLGYVAAKKYDIEAWMPGQGKFREVVSASNCTDWQARRLNIRF--RDRTDEKPR 403
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
+VH LN+TA AT+R I AILE HQ E G VRIP L K+
Sbjct: 404 YVHTLNSTAIATSRAIVAILENHQEEDGTVRIPKVLWKY 442
>gi|8039794|sp|O58441.2|SYS_PYRHO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|149241121|pdb|2DQ0|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii Complexed With A Seryl-Adenylate Analog
gi|149241122|pdb|2DQ0|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii Complexed With A Seryl-Adenylate Analog
gi|198443182|pdb|2ZR2|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii Complexed With Atp
gi|198443183|pdb|2ZR2|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii Complexed With Atp
gi|198443184|pdb|2ZR3|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii
gi|198443185|pdb|2ZR3|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii
Length = 455
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 146/459 (31%), Positives = 213/459 (46%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R +PE V+ + ++ + V+ VD++++ D +WR + + +N
Sbjct: 1 MLDIKLIRE----NPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNK 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ K EPV + LP N HPSVP
Sbjct: 57 IAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDYYLWRLP-NITHPSVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
V +E++N +R G V K + HVDL+ ++ G D
Sbjct: 116 VGKDENDNVPIRFWGKARVWKGHLERFLEQSQGKMEYEILEWKPKLHVDLLEILGGADFA 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL + IEKG+TP+ P+ +R+ V + F
Sbjct: 176 RAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTSFEDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV E +D YLI T+E P+ +H + L LP+ Y+GVS
Sbjct: 236 EDVIYKV---------------EDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW PG G FRE+VS SNC D+Q+RRL +R+ + +EK
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMPGQGKFREVVSASNCTDWQARRLNIRF--RDRTDEKPR 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
+VH LN+TA AT+R I AILE HQ E G VRIP L K+
Sbjct: 399 YVHTLNSTAIATSRAIVAILENHQEEDGTVRIPKVLWKY 437
>gi|47197545|emb|CAF88299.1| unnamed protein product [Tetraodon nigroviridis]
Length = 367
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 129/255 (50%), Positives = 149/255 (58%), Gaps = 57/255 (22%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + RT GD V+KKYSHVDL+ MIDG D E GA+VAG RGYF
Sbjct: 121 GNLLHPSVPISNDEDADNKVERTWGDCCVQKKYSHVDLVVMIDGFDGEKGAVVAGSRGYF 180
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG- 199
LKGP V L+ L+ YAL K Y+ LYTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 181 LKGPLVFLEQALINYALRMLHAKSYSMLYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 240
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIR----------------- 242
EK DS+ +D+KYLIATSEQPI A RD WL LPIR
Sbjct: 241 EKSEDSS-----IDEKYLIATSEQPIAAFLRDEWLKPEDLPIRTPASPPASGRRDTRGIF 295
Query: 243 ---------------------------YLGVSTCFRQEDLTKSIAYRVVNIVSG--ALNH 273
+G + F Q + I YR+VNIVSG A+
Sbjct: 296 RVHQFEKIEQFVYASPHDGKSWQMFEEMIGTAEEFYQ---SLGIPYRIVNIVSGESAVPV 352
Query: 274 AAAKKLDLEAWFPGS 288
+ L LE W PGS
Sbjct: 353 RRSGGL-LERWAPGS 366
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 18/23 (78%)
Query: 47 RHKADNFNKFKNLCSKVIGEKMK 69
R ADN NK KNLCS+ IGEKMK
Sbjct: 1 RFTADNLNKAKNLCSRSIGEKMK 23
>gi|18977576|ref|NP_578933.1| seryl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|397651704|ref|YP_006492285.1| seryl-tRNA ligase [Pyrococcus furiosus COM1]
gi|30173185|sp|Q8U1K2.1|SYS_PYRFU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|18893291|gb|AAL81328.1| seryl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|393189295|gb|AFN03993.1| seryl-tRNA ligase [Pyrococcus furiosus COM1]
Length = 455
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 212/459 (46%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDR--FKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD++L R +PE V+ + K R + +D+++ D +WR+ + + +N
Sbjct: 1 MLDINLIRN----NPELVKNDLKKRGELDKIAWIDEILRLDEEWRKKLKEINRLRHERNK 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ KA EPV D LP N HPSVP
Sbjct: 57 IAIEIGKRKKAGEPVEDLLAKSKEIVKRIEELEKEVEELRKRIDYYLWRLP-NITHPSVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
V +E++N +R G +V K + HVDL+ ++ G D
Sbjct: 116 VGKDENDNVPIRFWGKAKVWKGHLESFLEQSQGKMEYEVLEWRPKLHVDLLEILGGADFA 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL + IEKG+TP+ P+ +R+ V + F
Sbjct: 176 RAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTTFEDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV G +D YLI T+E P+ +H + L LP+ Y+ S
Sbjct: 236 EDVIYKVEG---------------EDLYLIPTAEHPLAGMHANEILDGKDLPLLYVAFSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHERLVRNAEELFQELEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW PG G FRE+VS SNC D+Q+RRL +R+ + +EK
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMPGQGRFREVVSASNCTDWQARRLNIRF--RDRTDEKPR 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
+VH LN+TA AT+R I AILE HQ E G V+IP L K+
Sbjct: 399 YVHTLNSTAIATSRAIVAILENHQQEDGTVKIPRALWKY 437
>gi|330040421|ref|XP_003239904.1| seryl-tRNA synthetase (serin-tRNA ligase) [Cryptomonas paramecium]
gi|327206830|gb|AEA39006.1| seryl-tRNA synthetase (serin-tRNA ligase) [Cryptomonas paramecium]
Length = 442
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 175/335 (52%), Gaps = 66/335 (19%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKK----YSHVDLITMIDGVDSEAGAIVA 134
T GN +H S S + ++ K + +K+ +HVDL++ ++GV+ + G +++
Sbjct: 102 TSIGNLVHNSSMFSMKVSNSKLIFLKQISIEKKQKLIFLNHVDLLSQVEGVEYQKGIVIS 161
Query: 135 GGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYK 194
G RGYFLK + L L+QY+L ++ + P+ TP+FM+K +M + AQL F E+LY
Sbjct: 162 GNRGYFLKKLGLLLNAALIQYSLDFLQKRNFVPIQTPYFMKKNIMMKCAQLEDFKEQLYC 221
Query: 195 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED 254
+ E +K+LIATSEQPI A+H + + + +LPI+Y G S+CFR+E
Sbjct: 222 I--------------KEETEKFLIATSEQPISALHVNQKILKKNLPIKYAGFSSCFRKES 267
Query: 255 -----------------------------------------------LTKSIAYRVVNIV 267
+I ++V+NI
Sbjct: 268 GSHGKDTAGIFRVHQFEKIEQFIICEREEISSWVFFQEILKNARDFYFLLNIPFKVINIS 327
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
S N+ A+KK D+ WFP S FRELVSCSNC D+Q+R L + T + +FV+M
Sbjct: 328 STTFNNTASKKADVLGWFPASNTFRELVSCSNCTDFQARNLNI-ISDTNFHTKNNKFVYM 386
Query: 328 LNATACATTRVICAILETHQTETGVRIPDCLRKFV 362
LN+T CATTRVIC ILE +Q + + IP L+K++
Sbjct: 387 LNSTLCATTRVICCILENYQFDKFIHIPRVLKKYM 421
>gi|224096564|ref|XP_002310660.1| predicted protein [Populus trichocarpa]
gi|222853563|gb|EEE91110.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 153/282 (54%), Gaps = 82/282 (29%)
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
VAGG G +LKG V L++ L L FFMRKEVM + AQL+QFDE L
Sbjct: 16 VAGGIGSYLKGDGVQLRLRLGTRHL--------------FFMRKEVMAKCAQLSQFDE-L 60
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
YKV G+G DDKYLIAT+EQP+CA H+D W+ + LPIRY G S+CFR+
Sbjct: 61 YKVTGEG-------------DDKYLIATAEQPLCAYHQDDWIHPSQLPIRYAGCSSCFRK 107
Query: 253 E--------------------------------------DLTKS---------IAYRVVN 265
E ++ K+ I Y+VV
Sbjct: 108 EAGAHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFCQELNIPYQVVA 167
Query: 266 IVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM------- 318
IVSGALN AAAKK DLE WFP S +RELVSCSNC DYQSRRL +RYGQ K M
Sbjct: 168 IVSGALNDAAAKKYDLEGWFPASNTYRELVSCSNCTDYQSRRLEIRYGQKKAMPFLFIEE 227
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRK 360
K ++ H+LN+T AT R IC ILE +Q E GV IP+ LRK
Sbjct: 228 QVKKQYCHLLNSTLTATERTICCILENYQKEDGVGIPEPLRK 269
>gi|401826008|ref|XP_003887098.1| seryl-tRNA synthetase [Encephalitozoon hellem ATCC 50504]
gi|392998256|gb|AFM98117.1| seryl-tRNA synthetase [Encephalitozoon hellem ATCC 50504]
Length = 429
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 170/331 (51%), Gaps = 62/331 (18%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN + V VSN+E +N IVR+ +K M D S AGA V G RGY+L
Sbjct: 112 GNIISKEVVVSNDEKDNPIVRSYRSGRSIQKNPQPFSALMKDFTHSAAGAKVIGHRGYYL 171
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
G L L +YA+ KGYT + TP +R++VM + +QL+ FDE+LYKV
Sbjct: 172 SGKMARLAQALTRYAIDFLENKGYTYIQTPVMLRRDVMAKTSQLSDFDEQLYKV------ 225
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
DD YLIATSEQ + A++ D + +P ++ G S CFR+E
Sbjct: 226 ----------EDDLYLIATSEQALAALYMDERMTPQEVPKKFCGQSLCFRKEAGAHGKDN 275
Query: 254 -----------------------------------DLTKS--IAYRVVNIVSGALNHAAA 276
+ +S I+Y VV+IVSG LN AAA
Sbjct: 276 AGLFRVHQFEKIEQFVICEPSESQRHHEEMIRICEEFYQSLDISYNVVSIVSGELNDAAA 335
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
K DLEA+FP + +RELVSCSNC DYQSR L +RYG K+ N K+ +VH+LN T CA
Sbjct: 336 IKYDLEAYFPNAEKYRELVSCSNCTDYQSRELEIRYGIVKENNRKV-YVHLLNGTMCAIQ 394
Query: 337 RVICAILETHQTETGVRIPDCLRKFVPAVYV 367
R +C I+E +Q E G+ +PD L+ + ++
Sbjct: 395 RALCCIVENYQRENGIDVPDVLQGYFGGDFI 425
>gi|254168130|ref|ZP_04874977.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|197622896|gb|EDY35464.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469]
Length = 442
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/460 (31%), Positives = 210/460 (45%), Gaps = 117/460 (25%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D+ L R K GD +R + RFK+ ++VD++++ D WR+ + + +N S
Sbjct: 1 MIDIKLIR--KNGD--MIRDMLRKRFKDEKIVDEILQYDNLWRETLKEIEKLRHERNKKS 56
Query: 62 KVIGEKMK-----------AKEPVGDSSTLPGN-----------------HLHPSVPVSN 93
IG+ +K KE L N L PV
Sbjct: 57 VEIGKLVKEGKDIKELKDEMKELNRRIKELEENVEEYKKRRDYLLMRLPNLLLDDTPVCE 116
Query: 94 NEDENGIVRTKGDTEV---------------------RKKYSHVDLITMIDGVDSEAGAI 132
E+ + +VRT G V K SHVD+I D D+
Sbjct: 117 GEENSPVVRTWGKARVMEDNMEYFKNCSAGMDYELIENKPESHVDIIEKYDLADTARAGK 176
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
+AG R Y+LK V L+ L+++AL + KGYTP+ P +R+ M+ V F+E +
Sbjct: 177 IAGARFYYLKNELVILEQSLIRFALDHMVSKGYTPVTPPLMIRRAAMEGVIDFEAFEEMI 236
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
YK+ G +D Y+IAT+E P+ A+H L SLP++Y+G+S CFR+
Sbjct: 237 YKIEG---------------EDLYMIATAEHPLVAMHMKEILDPNSLPLKYVGISPCFRK 281
Query: 253 E------------------------------------DLTKS---------IAYRVVNIV 267
E +L K+ + YRV+NI
Sbjct: 282 EAGAHGKDTKGIFRVHNFYKVEQVVFSKPEESAILMEELIKNAEEILQKLELPYRVINIC 341
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
SG L AAKK D+E W P FRE+VSCSNCL+YQ+RRL++RY ++ +FVH
Sbjct: 342 SGELGAVAAKKYDIEVWMPAQQKFREVVSCSNCLEYQARRLMIRYRDKGEL----KFVHT 397
Query: 328 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 367
LN+TA ATTR+I AI+E Q + G+RIP L + Y+
Sbjct: 398 LNSTALATTRIIVAIMENFQEDKGIRIPKALVPYTGFEYI 437
>gi|389852601|ref|YP_006354835.1| seryl-tRNA synthetase [Pyrococcus sp. ST04]
gi|388249907|gb|AFK22760.1| seryl-tRNA synthetase [Pyrococcus sp. ST04]
Length = 455
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/483 (30%), Positives = 220/483 (45%), Gaps = 132/483 (27%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R + PE V+ + ++ + V+ +D++++ D +WR + + +N
Sbjct: 1 MLDIKLIREK----PELVKNDLIKRGELEKVKWIDEILKLDAEWRTKLKEINKLRHERNK 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ KA EPV D LP N HPSVP
Sbjct: 57 IAIEIGKRRKAGEPVDDLLAKSKEIVRKIETLEKEVEELRKRIDYYLWRLP-NITHPSVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
V +E++N +R G V K + HVDL+ ++ G D
Sbjct: 116 VGKDENDNVPIRFWGKARVWKGHLERFLEQSQGKMEYEVLEWKPKLHVDLLEILGGADFA 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL + IEKG+TP+ P+ +R+ V + F
Sbjct: 176 RAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGATTFEDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV G +D YLI T+E P+ +H + L LP+ Y+ S
Sbjct: 236 EDVIYKVEG---------------EDLYLIPTAEHPLAGLHANEILDGKDLPLLYVAFSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHERIIRNAEELFQELEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW PG G FRE+VS SNC D+Q+RRL +R+ + +EK
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMPGQGRFREVVSASNCTDWQARRLNIRF--RDRTDEKPR 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
+VH LN+TA AT+R I AILE HQ E G V+IP L K+ F + P+D
Sbjct: 399 YVHTLNSTAIATSRAIVAILENHQQEDGTVKIPKVLWKYT-----------GFKEIVPVD 447
Query: 383 EEE 385
++E
Sbjct: 448 KKE 450
>gi|254168019|ref|ZP_04874867.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|289596026|ref|YP_003482722.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|197623062|gb|EDY35629.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|289533813|gb|ADD08160.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469]
Length = 442
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 210/460 (45%), Gaps = 117/460 (25%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D+ L R K GD +R + RFK+ ++VD++++ D WR+ + + +N S
Sbjct: 1 MIDIKLIR--KNGD--MIRDMLRKRFKDEKIVDEILQYDNLWRETLKEIEKLRHERNKKS 56
Query: 62 KVIGEKMK-----------AKEPVGDSSTLPGN-----------------HLHPSVPVSN 93
IG+ +K KE L N L PV
Sbjct: 57 VEIGKLVKEGKDIKELKDEMKELNRRIKELEENVEEYKKRRDYLLMRLPNLLLDDTPVCE 116
Query: 94 NEDENGIVRTKGDTEV---------------------RKKYSHVDLITMIDGVDSEAGAI 132
E+ + +VRT G V K SHVD+I D D+
Sbjct: 117 GEENSPVVRTWGKARVMEDNMEYFKNCSAGMDYEIIENKPESHVDIIEKYDLADTARAGK 176
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
+AG R Y+LK V L+ L+++AL + KGYTP+ P +R+ M+ V F+E +
Sbjct: 177 IAGARFYYLKNELVILEQSLIRFALDHMVSKGYTPVAPPLMIRRAAMEGVIDFEAFEEMI 236
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
YK+ G +D Y+IAT+E P+ A+H L SLP++Y+G+S CFR+
Sbjct: 237 YKIEG---------------EDLYMIATAEHPLVAMHMKEILDPNSLPLKYVGISPCFRK 281
Query: 253 E------------------------------------DLTKS---------IAYRVVNIV 267
E +L K+ + YRV+NI
Sbjct: 282 EAGAHGKDTKGIFRVHNFYKVEQVVFSKPEESAILMEELIKNAEEILQKLELPYRVINIC 341
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
SG L AAKK D+E W P FRE+VSCSNCL+YQ+RRL++RY ++ +FVH
Sbjct: 342 SGELGAVAAKKYDIEVWMPAQQKFREVVSCSNCLEYQARRLMIRYRDKGEL----KFVHT 397
Query: 328 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 367
LN+TA ATTR++ AI+E Q + G+RIP L + Y+
Sbjct: 398 LNSTALATTRIMVAIMENFQEDRGIRIPKALVPYTSFEYI 437
>gi|332158998|ref|YP_004424277.1| seryl-tRNA synthetase [Pyrococcus sp. NA2]
gi|331034461|gb|AEC52273.1| seryl-tRNA synthetase [Pyrococcus sp. NA2]
Length = 456
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 213/459 (46%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R +P+ V+ + ++ + V+ +D++++ D +WR + + +N
Sbjct: 1 MLDIKLIRE----NPDLVKNDLIKRGELEKVKWIDEILKLDAEWRAKLKEINKLRHERNK 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG K K EP+ D LP N HP+VP
Sbjct: 57 IAIEIGNKRKRGEPIDDLLAKSKEIVRRIETLEKEVEELRKRIDYYLWRLP-NITHPTVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
V +E++N +R G +V K + HVDL+ ++ G D
Sbjct: 116 VGKDENDNVPIRFWGKAKVWKGHLERFLEQSQGKMEYEVLEWKPRLHVDLLEILGGADFA 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL + IEKG+TP+ P+ +R+ V + F
Sbjct: 176 RAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTTFEDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV G +D YLI T+E P+ +H + L LP+ Y+GVS
Sbjct: 236 EDVIYKVEG---------------EDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHERIIRNAEELFQELEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW PG G FRE+VS SNC D+Q+RRL +R+ + +EK
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMPGQGRFREVVSASNCTDWQARRLNIRF--RDRTDEKPR 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
+VH LN+TA AT+R I AILE HQ E G V+IP L K+
Sbjct: 399 YVHTLNSTAIATSRAIVAILENHQEEDGTVKIPKVLWKY 437
>gi|341583098|ref|YP_004763590.1| seryl-tRNA synthetase [Thermococcus sp. 4557]
gi|340810756|gb|AEK73913.1| seryl-tRNA synthetase [Thermococcus sp. 4557]
Length = 455
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 213/459 (46%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R +P+ VR + ++ + ++ +D+++E D +WR K + K +N
Sbjct: 1 MLDIKLIRE----NPDIVRGDLIKRGEIEKLKWIDEILELDARWRDNLKKINQLRKERNQ 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ KA EP+ D LP N H SVP
Sbjct: 57 LAVQIGKRKKAGEPIDDLLARSNEIVKQIEELEKEVEELRKRIDYYLWRLP-NITHESVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
V ++ EN +R G V + + HVD++ ++ G D E
Sbjct: 116 VGKDDTENVPIRFWGKARVWEGFLESFKEQSLGKMDYEVLDWRPRLHVDMLELLRGADLE 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL K IEKG+ P+ P+ +R+ V + V F
Sbjct: 176 RAAKVSGARFYYLMNELVILDLALLRFALDKLIEKGFVPVIPPYMVRRFVEEGVTSFGDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV G +D YL+ T+E P+ +H + + LP+ Y GVS
Sbjct: 236 EDVIYKVEG---------------EDLYLVPTAEHPLAGMHANEIIEGKDLPLLYAGVSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYARPEESWEWHEKLIANAEEIFRELEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW G G FRE+VS SNC ++Q+RRL +R+ K +EK +
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMAGQGKFREVVSASNCTEWQARRLNIRF--RDKTHEKPK 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
FVH LN+TA AT+R I AILE QTE G V++P L K+
Sbjct: 399 FVHTLNSTAIATSRAIVAILENFQTEEGVVKLPKALWKY 437
>gi|403223220|dbj|BAM41351.1| seryl-tRNA synthetase [Theileria orientalis strain Shintoku]
Length = 534
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 173/326 (53%), Gaps = 79/326 (24%)
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFM 174
H +++T ++G++ G +AG RG+FLKG L + L+QY + + +G+ P++TP+ M
Sbjct: 208 HHEILTRLNGLEVTKGVEIAGHRGFFLKGAGCLLNLALIQYGFNFLVRRGFLPVHTPYLM 267
Query: 175 RKEVMQEVAQLAQFDEELYKV-----IGKGEKVGDSAPE------------------KDE 211
RKE+M E A+L F+E LY + +GE G S+ KD+
Sbjct: 268 RKEIMSECAELDDFEETLYCIPPLNGPSEGENGGTSSNTNIISSNSSGNNDSNSTVGKDK 327
Query: 212 LDDK---YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DL------- 255
DK +LIATSEQP+ A+HR+ LPI+Y G+STCFR+E DL
Sbjct: 328 DFDKNKLFLIATSEQPLAALHRNETYQRRQLPIKYAGLSTCFRREAGAHGRDLKGIFRVH 387
Query: 256 --------------------------------TKSIAYRVVNIVSGALNHAAAKKLDLEA 283
+ + +RVV+IV+GALN AA+KK DLEA
Sbjct: 388 QFQKVEQFVVCSPESSKEMHEHMLALSEEFYRSLKLPFRVVSIVAGALNKAASKKYDLEA 447
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFPG +RELVSCSNC DYQ+R L RY + N+ ++HMLN T A+ R +C +L
Sbjct: 448 WFPGYNDYRELVSCSNCTDYQARNLNSRY--YDRNNQDKTYLHMLNGTLVASQRCLCCVL 505
Query: 344 ETHQTETGVRIPDCL------RKFVP 363
E +QT GV +P+ L ++F+P
Sbjct: 506 ENYQTPDGVIVPEPLVPYMDGQEFIP 531
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++ FR EK +++R+++ R + +VDKVIE D W++ + + + N
Sbjct: 1 MVLDINYFRDEKL--LKELRESEARRCETNSVVDKVIEADNDWKKAMYSYEQLKRNLNEM 58
Query: 61 SKVIGEKMKAKEPVGD 76
SK I E K GD
Sbjct: 59 SKKISEYAKLNRGKGD 74
>gi|195093186|ref|XP_001997702.1| GH24998 [Drosophila grimshawi]
gi|193905713|gb|EDW04580.1| GH24998 [Drosophila grimshawi]
Length = 160
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/126 (75%), Positives = 112/126 (88%), Gaps = 3/126 (2%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YR+VNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQTKKM
Sbjct: 14 IPYRIVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKM 73
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N +++VHMLNAT CA TRVICAILETHQTETG+++P+ L++++PA + + EIPFVK
Sbjct: 74 NAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKRYMPAKFQD---EIPFVKP 130
Query: 379 APIDEE 384
APID E
Sbjct: 131 APIDLE 136
>gi|429963273|gb|ELA42817.1| serine-tRNA ligase, partial [Vittaforma corneae ATCC 50505]
Length = 397
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 171/330 (51%), Gaps = 70/330 (21%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRK----KYSHVDLITMIDGVDSEAGAIVAGGR 137
GN L SVP+ +D N +VRT T RK S+ +L+ + EAGA V G R
Sbjct: 82 GNILEESVPICKTDDGNVVVRTH--TGFRKIPESPKSYAELMKCY--TNPEAGAEVFGHR 137
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
GYFL+G L L YA+ + KGY + P MRK+VM +QL+ FD++LYKV
Sbjct: 138 GYFLQGKMALLARALKNYAIDFLVSKGYEFIQPPVMMRKDVMALTSQLSDFDDQLYKV-- 195
Query: 198 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---- 253
+D YLIATSEQP+ A+ + L E+ LP + G S CFR+E
Sbjct: 196 --------------EEDLYLIATSEQPLTALFINKKLTESDLPKMFAGDSLCFRKEAGAY 241
Query: 254 --------------------------------DLTKS---------IAYRVVNIVSGALN 272
+L K ++Y++V I SG +N
Sbjct: 242 GKDNAGIFRVHQFEKIEQFVICSPEESKQIHENLVKQCEEFYQSLGLSYQIVLISSGEMN 301
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
AAAKK DLEAWFP S FRELVS SNC DYQSR L V YG TK+ NE+ +VHMLNAT
Sbjct: 302 DAAAKKYDLEAWFPNSQKFRELVSASNCTDYQSRNLNVGYGFTKE-NERQSYVHMLNATL 360
Query: 333 CATTRVICAILETHQTETGVRIPDCLRKFV 362
CA R +C I+E +Q E + +P+ L+K+
Sbjct: 361 CAIQRSLCCIVENYQEEDRISVPEVLKKYT 390
>gi|388522659|gb|AFK49391.1| unknown [Lotus japonicus]
Length = 238
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 134/231 (58%), Gaps = 60/231 (25%)
Query: 179 MQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEAS 238
M + AQLAQFDEELYKV G+G DDKYLIAT+EQP+CA H D W+ +
Sbjct: 1 MSKCAQLAQFDEELYKVTGEG-------------DDKYLIATAEQPLCAYHLDDWIHPSQ 47
Query: 239 LPIRYLGVSTCFRQE--------------------------------------------- 253
LPIRY G S+CFR+E
Sbjct: 48 LPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNDNDSWDMHEEMLKNSE 107
Query: 254 DLTK--SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVR 311
D K +I YRVV+IVSGALN AAAKK DLEAWFP S A+RELVSCSNC DYQ+RRL +R
Sbjct: 108 DFYKELNIPYRVVSIVSGALNDAAAKKYDLEAWFPASQAYRELVSCSNCTDYQARRLEIR 167
Query: 312 YGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFV 362
YGQ K + ++VH+LN+T AT R IC ILE +Q + GV IP+ LR ++
Sbjct: 168 YGQRKSNEQLKQYVHLLNSTLTATERTICCILENNQKDDGVEIPEALRPYM 218
>gi|14521535|ref|NP_127011.1| seryl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|13878800|sp|Q9UZ21.1|SYS_PYRAB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|5458754|emb|CAB50241.1| serS seryl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|380742144|tpe|CCE70778.1| TPA: seryl-tRNA synthetase [Pyrococcus abyssi GE5]
Length = 455
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/459 (30%), Positives = 214/459 (46%), Gaps = 121/459 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDR--FKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R +PE V+ + K R + ++ +D++++ D +WR + + +N
Sbjct: 1 MLDIKLIRE----NPELVKNDLKKRGELEKIKWIDEILKLDAEWRAKLKEINKLRHERNK 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ K EPV + LP N HPSVP
Sbjct: 57 IAIEIGKRRKKGEPVEELLAKSKEIVKRIESLEKEVEELKKKIDYYLWRLP-NITHPSVP 115
Query: 91 VSNNEDENGIVRTKGDTEV--------------RKKYS--------HVDLITMIDGVDSE 128
+ +E++N +R G V + +Y HVDL+ ++ G D
Sbjct: 116 IGESEEDNVPIRFWGKARVWEGHLERFLEQSQGKMEYEVLEWRPKLHVDLLEILGGADFA 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R Y+L V L + L+++AL + I+KG+TP+ P+ +R+ V + F
Sbjct: 176 RAAKVSGSRFYYLLNEIVILDLALIRFALDELIKKGFTPVIPPYMVRRFVEEGSTTFEDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YKV G +D YLI T+E P+ +H + L LP+ Y+G+S
Sbjct: 236 EDVIYKVEG---------------EDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGISP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHERIIRNAEELFQKLEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW PG G FRE+VS SNC D+Q+RRL +R+ + +EK
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMPGQGRFREVVSASNCTDWQARRLNIRF--RDRTDEKPR 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
+VH LN+TA AT+R I AILE HQ E G V+IP L K+
Sbjct: 399 YVHTLNSTAIATSRAIVAILENHQEEDGTVKIPKVLWKY 437
>gi|429964021|gb|ELA46019.1| serine-tRNA ligase [Vavraia culicis 'floridensis']
Length = 465
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 176/327 (53%), Gaps = 66/327 (20%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRK--KYSHVDLITMIDGVDSEAGAIVAGGRGY 139
GN LH V VS +E+ N ++ +K D+ ++ K ++ D++ + VD + G+ V+G RGY
Sbjct: 148 GNVLHKDVFVSKDEEHNPVI-SKYDSGNKRNGKLAYYDVMERLGCVDMKRGSKVSGHRGY 206
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
FL L+ LV+Y++ KGY + TP + K+VM + AQL++FDE+LY
Sbjct: 207 FLFEELALLENALVRYSIDFLRSKGYMLVQTPVLLNKDVMSKTAQLSEFDEQLYSA---- 262
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
DD+YLIATSEQP+ ++ + L LP + G S CFR+E
Sbjct: 263 -------------DDQYLIATSEQPLTGLYMNERLLPEQLPKKLCGQSLCFRKEAGAAGK 309
Query: 254 -------------------------------------DLTKSIA--YRVVNIVSGALNHA 274
+S+ YRVV+IVSG +N +
Sbjct: 310 DNKGIFRVHQFEKVEQFVVCAPGESEEVHQSMLAISEQFYQSLGLDYRVVSIVSGEMNDS 369
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
A K DLEA+FP S +RELVSCSNC DYQ+R L VRYG TK+ ++K+ + HMLNAT CA
Sbjct: 370 ACLKYDLEAYFPHSKRYRELVSCSNCTDYQARDLEVRYGITKENDKKL-YCHMLNATLCA 428
Query: 335 TTRVICAILETHQTETGVRIPDCLRKF 361
R +C ++E +Q E G+++PD L K+
Sbjct: 429 VQRTLCCLVENYQDEEGIKVPDVLVKY 455
>gi|156086478|ref|XP_001610648.1| seryl-tRNA synthetase [Babesia bovis T2Bo]
gi|154797901|gb|EDO07080.1| seryl-tRNA synthetase, putative [Babesia bovis]
Length = 502
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 151/494 (30%), Positives = 220/494 (44%), Gaps = 133/494 (26%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+ FR + +R ++ R +VD VI D +W++ H + + N
Sbjct: 1 MVLDIKYFRN--SNLLQLLRASESRRCVANSMVDSVIAADEEWKRANHAYEQAKRHYNEI 58
Query: 61 SKVIGEKMKAKEPVGDS----------------------STLP----------------- 81
SK IG + K P D+ S L
Sbjct: 59 SKKIGMVVSNKIPAVDADGNSIEKSVLIEQLKGEAESHKSELADLLNKANALSKNRDVLL 118
Query: 82 ---GNHLHPSVPVSNNEDENGIV---------------------------RTKGDTEVRK 111
GN + S +EDEN +V +T G+ +R
Sbjct: 119 RSVGNIVSEDTVASKDEDENAVVSHWEPSKYGWEDYIQSRDIKEYSTTETKTVGEHGIRL 178
Query: 112 K----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTP 167
SH D++ ++GV+ + G VAG RGY+L+G L + ++QY + +GY
Sbjct: 179 PPWPVLSHCDVMLNLNGVNLKKGIEVAGHRGYYLRGQCCLLNLAIIQYGIDFLTRRGYDA 238
Query: 168 LYTPFFMRKEVMQEVAQLAQFDEELYKV----IGKGEKVGDSAPEKDELDDK-------Y 216
+ P+FM+K++M+E A+L F+E LY + + D+ EL D+ Y
Sbjct: 239 VMPPYFMKKDIMRECAELGDFEETLYCIPPLRHNESSASNDNNHPSTELKDEDYEREKLY 298
Query: 217 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DL--------------- 255
LIATSEQPI A+HR+ LP++Y G+STCFR+E DL
Sbjct: 299 LIATSEQPIAALHRNETYSIKELPLKYAGLSTCFRREAGAHGRDLRGIFRIHQFQKVEQF 358
Query: 256 ------------------------TKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAF 291
+ ++ YRVV+IV+GALN+AAAKK DLEA+FP A+
Sbjct: 359 VVCGAEDSWKHHDEMINISKEFYQSLNLPYRVVSIVAGALNNAAAKKYDLEAYFPEMAAY 418
Query: 292 RELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG 351
RELVSCSNC DYQS L +Y + K + + HMLN T A+ R +C ILE +QT G
Sbjct: 419 RELVSCSNCTDYQSCDLNTKYFE--KDTSQRQLCHMLNGTLVASQRTLCCILENYQTPHG 476
Query: 352 VRIPDCLRKFVPAV 365
+ +P L ++ V
Sbjct: 477 LIVPKVLVPYMGGV 490
>gi|85000409|ref|XP_954923.1| seryl-tRNA synthetase [Theileria annulata strain Ankara]
gi|65303069|emb|CAI75447.1| seryl-tRNA synthetase, putative [Theileria annulata]
Length = 532
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 170/324 (52%), Gaps = 70/324 (21%)
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFM 174
H +++ ++ ++ +AG R +FLKG L + L+QY L + KGY P++TP+FM
Sbjct: 214 HHEILAKLNSLEINKAVEIAGHRAFFLKGKGCLLNMALIQYGLQFLVRKGYLPVHTPYFM 273
Query: 175 RKEVMQEVAQLAQFDEELYKV----------IGKGEKVGDSAPEKD-ELDDK-------Y 216
RKEVM E A+L F+ LY + K + +D EL +K +
Sbjct: 274 RKEVMSECAELDDFETTLYCIPLTDSTAPNATADATKTTSTNGTRDMELKEKDVDKNKLF 333
Query: 217 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DL--------------- 255
LIATSEQPI A+HR+ + LPIRY G+STCFR+E DL
Sbjct: 334 LIATSEQPIAALHRNEVYQKKQLPIRYAGISTCFRREAGAHGKDLRGIFRVHQFQKVEQF 393
Query: 256 ------------------------TKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAF 291
+ + YR+V+IV+GALN AA+KK DLEAWFPG +
Sbjct: 394 VVCTPENSIQEHEQMVKFSEEFYRSLKLPYRIVSIVAGALNKAASKKYDLEAWFPGYEDY 453
Query: 292 RELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG 351
RELVSCSNC DYQ++ L ++ K N+ + VHMLN T A+ R +C ILE +QT G
Sbjct: 454 RELVSCSNCTDYQAQNLNSKF--YDKNNQDRKHVHMLNGTLVASQRCLCCILENYQTPDG 511
Query: 352 VRIPDCLRKFVPAVYVNEAGEIPF 375
+ +P+ L VP Y++ IPF
Sbjct: 512 IIVPEPL---VP--YMDGLEFIPF 530
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++ FR E ++++++++ R ++ +VDKVIE D W++ D K N
Sbjct: 1 MVLDINYFRDENL--LKQLKESEERRCESNSVVDKVIEADKDWKKAMFAYDQLKKSVNEV 58
Query: 61 SKVIGEKMKAKEPVGDSST 79
SK I E K GD S
Sbjct: 59 SKKISEYTKLNRHKGDLSN 77
>gi|170290556|ref|YP_001737372.1| seryl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
gi|229890221|sp|B1L5G0.1|SYS_KORCO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|170174636|gb|ACB07689.1| seryl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
Length = 456
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 146/446 (32%), Positives = 210/446 (47%), Gaps = 119/446 (26%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI-----GEK-- 67
DPE +R+N + RF ++++++ IE D KWR+ + ++ + +N ++ I GE+
Sbjct: 12 DPEILRENLRRRFLPLDMLERAIELDRKWREAVTELNSLRERRNEINRSIPRADPGEREE 71
Query: 68 --MKAKEPVGDS-------------------STLPGNHLHPSVPVSNNEDENGIVRTKGD 106
KAKE +G+ ++P + SVP+ NED N +R G
Sbjct: 72 LIRKAKE-IGEEIERLEDVLEKLSQERDSILMSMPA-LIDDSVPIGPNEDYNKPIRFWGK 129
Query: 107 TEVRK---------------KYSHVD---------LITMIDGVDSEAGAIVAGGRGYFLK 142
+V + +Y +D L M+ VD+ +AG R ++L
Sbjct: 130 PKVPRSKLDSFMEQTRGFNVEYELIDWEPLGHADELEVMLKQVDTVKAGQLAGSRFFYLF 189
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
V L+ L+ +AL K KG+ P+ P+ MR++ V L F++ +YKV G
Sbjct: 190 KDIVWLEQALILFALDKISRKGFIPVIPPYMMRRDYYLGVVDLNTFEDSIYKVEG----- 244
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
+D YLIATSE P+ A+H E LP Y+G+S CFR+E
Sbjct: 245 ----------EDLYLIATSEHPLVAMHAGDTFTEDELPRLYVGLSPCFRKEAGTHGKDTK 294
Query: 254 ------DLTK------------------------------SIAYRVVNIVSGALNHAAAK 277
TK I YR+VNI SG L +AAK
Sbjct: 295 GIFRVHQFTKVEQIVFSKPEESKYWHERLIENAEEIYRELEIPYRIVNIASGDLGASAAK 354
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLE WFP G +RELVSCSNC+D+QS RL ++ + + EFVH LN+TA ATTR
Sbjct: 355 KYDLEGWFPAQGKYRELVSCSNCVDWQSYRLRIKLDRKGRR----EFVHTLNSTALATTR 410
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
I AI+E HQ E G VRIP LRK++
Sbjct: 411 TISAIVENHQREDGSVRIPKALRKYL 436
>gi|327400152|ref|YP_004340991.1| seryl-tRNA synthetase [Archaeoglobus veneficus SNP6]
gi|327315660|gb|AEA46276.1| Seryl-tRNA synthetase [Archaeoglobus veneficus SNP6]
Length = 453
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 202/446 (45%), Gaps = 112/446 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS------------- 61
+PE + ++Q+ R ++ E+V++ IE D WRQ H+ +N +N S
Sbjct: 11 NPEILMESQRRRGESTEIVERAIELDKLWRQKLHELNNLRHERNKLSAAIKKASKDERAK 70
Query: 62 -----KVIGEKMKAKEPVGDSS---------TLPGNHLHPSVPVSNNEDENGIVRTKGDT 107
K I EK+KA E ++P N LH SVP+ ++ EN +R G
Sbjct: 71 LIEEAKKIAEKVKAGEEELKKLEEELNRVLLSIP-NILHESVPIGKDDTENVPIRFWGKP 129
Query: 108 EVRKKY----------------------SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
+V +++ H D + D E A VAG R Y+L
Sbjct: 130 KVYREHVEEFIKQTGGNIDYDVIDRLPVGHADAVETWGWADIERAAKVAGSRFYYLLNDL 189
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
V L L+ YAL ++G+ + P+ MR++ + V L F+E +YKV G
Sbjct: 190 VWLDFALISYALDFLAKQGFRIVSPPYMMRRQAYEGVTALGDFEEVIYKVEG-------- 241
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------- 258
+D +LIATSE P+ A+H + + E LP+ Y GVS CFR+E
Sbjct: 242 -------EDLFLIATSEHPLAAMHMNEVIAEDDLPLLYAGVSPCFRKEAGAHGKDTKGIF 294
Query: 259 --------------------------------------IAYRVVNIVSGALNHAAAKKLD 280
I YR+VNI +G + AAKK D
Sbjct: 295 RVHQFNKVEQFVYCLPEESWEWHEKLIENAEKLWQGLEIPYRIVNICTGDIGIVAAKKYD 354
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
LEAW P G +RE+VSCSNC D+QS RL +RY + K K FVH LN+TA ATTR I
Sbjct: 355 LEAWMPAQGKYREMVSCSNCTDWQSYRLNIRYAEEKGKPSK-GFVHTLNSTAIATTRAIT 413
Query: 341 AILETHQTETG-VRIPDCLRKFVPAV 365
AI+E Q E G V IP LRK++ +
Sbjct: 414 AIIENFQLEDGRVEIPKVLRKYLEPI 439
>gi|288930586|ref|YP_003434646.1| seryl-tRNA synthetase [Ferroglobus placidus DSM 10642]
gi|288892834|gb|ADC64371.1| seryl-tRNA synthetase [Ferroglobus placidus DSM 10642]
Length = 450
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/442 (33%), Positives = 204/442 (46%), Gaps = 107/442 (24%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKN-LCSKVIGEKM----- 68
+PE + ++Q+ R ++VE+V K IE D WR+ ++ D + +N L K+ E+
Sbjct: 11 NPEILVESQRRRGEDVEIVYKAIELDKNWRKKLYELDQLRRERNELSRKLKSERSEELIK 70
Query: 69 KAKE---------------PVGDSSTLPG--NHLHPSVPVSNNEDENGIVRTKGDTEVRK 111
KAKE S L N +H SVP+ +E++N +R G +V +
Sbjct: 71 KAKEISERVKKEEEELKKLEEELKSVLLSIPNIVHESVPIGEDENDNVPIRFWGKPKVYR 130
Query: 112 KY----------------------SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
++ H D + + D E A VAG R Y+L V L
Sbjct: 131 EHVEQFLKQTNGEVEYEVIDKPVVGHADAVEIFGWADLERAAKVAGSRFYYLLEDLVWLD 190
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ YAL ++G+ + P+ MR E V + F+E LYK+ G
Sbjct: 191 FALMMYALEFLSKQGFKIVNPPYMMRYEAYAGVTAFSDFEEVLYKLEG------------ 238
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------D 254
+D YLIATSE P+ A+H + L E LP+ Y GVS CFR+E
Sbjct: 239 ---EDLYLIATSEHPLAAMHMNETLGEDELPLLYAGVSPCFRKEAGAHGKDTKGIFRVHQ 295
Query: 255 LTK------------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
K I YR+VNI +G L AAKK DLEAW
Sbjct: 296 FNKVEQFVFCLPEESWEWHEKLIENAEKLWQGLGIPYRIVNICTGDLGVVAAKKYDLEAW 355
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P G +RE+VSCSNC D+QS RL +RY + + M K FVH LN+TA ATTR I AI+E
Sbjct: 356 MPAQGKYREMVSCSNCTDWQSYRLNIRYAEKRGMPSK-GFVHTLNSTAIATTRAITAIIE 414
Query: 345 THQTETG-VRIPDCLRKFVPAV 365
+Q E G V IP LRK++ +
Sbjct: 415 NYQLEDGRVEIPKVLRKYLEPI 436
>gi|359415872|ref|ZP_09208259.1| Seryl-tRNA synthetase [Candidatus Haloredivivus sp. G17]
gi|358033772|gb|EHK02290.1| Seryl-tRNA synthetase [Candidatus Haloredivivus sp. G17]
Length = 330
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 171/328 (52%), Gaps = 66/328 (20%)
Query: 82 GNHLHPSVPVSNNEDENGIVRT--KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGY 139
GN LH SVP +E +N ++ D +V D+I D + SE A AG R Y
Sbjct: 13 GNILHESVPQGEDEHDNKEIKAWEPEDGKVEDARLAADIIDENDLIHSETAAENAGERAY 72
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
+LKG L L+Q+++ EKG+TP+ TP+ + + M A+L F+E+LYK+
Sbjct: 73 YLKGDLFRLNQALIQFSMDILREKGFTPMQTPYMLNYDAMSAAAELEDFEEQLYKI---- 128
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------- 252
E +DKYLIATSEQ + +H+D L E P +Y G ST FRQ
Sbjct: 129 -----------EDEDKYLIATSEQTLATLHKDDLLLEEEFPKKYAGFSTNFRQEAGKHGQ 177
Query: 253 ------------------------------------EDLTKSIA--YRVVNIVSGALNHA 274
E++TK + YRVVN+ +G +N
Sbjct: 178 QTRGIWRVHQFEKVEQYIFCKPENSWDLHEVLLENAEEVTKRLGLPYRVVNVCTGDMNDN 237
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G + E+VSCSNC DYQ+R++ VR +K +E E H LNATACA
Sbjct: 238 AAKKYDIEVWRPPLGEYGEIVSCSNCTDYQARKVNVR---IRKGDEN-EVAHTLNATACA 293
Query: 335 TTRVICAILETHQTETGVRIPDCLRKFV 362
T+R++ AI+E +QTE G++IP+ L+ ++
Sbjct: 294 TSRIMTAIIENNQTEEGIQIPEALQSYM 321
>gi|68073951|ref|XP_678890.1| seryl-tRNA synthetase [Plasmodium berghei strain ANKA]
gi|56499498|emb|CAH98026.1| seryl-tRNA synthetase, putative [Plasmodium berghei]
Length = 390
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 171/335 (51%), Gaps = 82/335 (24%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFRTEKGG+PEK+++++K RF +V VDKVIE D KWR+ K + K NL
Sbjct: 1 MVLDINLFRTEKGGNPEKIKESEKKRFNDVSNVDKVIEYDEKWRKSIFKLEELKKNINLI 60
Query: 61 SKVIGEKMKAKEPV----------GDSSTLP--------------------GNHLHPSVP 90
+K IG K K + V +P GN L V
Sbjct: 61 NKTIGNKKKEDKNVDVEDLKQRSLSMKEEIPLIQNEEKHLLKQRNMYLAKVGNILSSKVV 120
Query: 91 VSNNEDENGIVRTKGD---------------------------------------TEVRK 111
++N+E+ N IVRT G+ +E++K
Sbjct: 121 INNDEEYNKIVRTWGECKNYEATDLEKSDISKEDIPNTKREVGNNNDGQNKVSIISEIKK 180
Query: 112 KYS-HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYT 170
KY H DL+ I GV+ + G +VAG RGY+L G L ++QYA++ K YTP+Y
Sbjct: 181 KYYYHYDLLRKIGGVNFKKGVLVAGHRGYYLTGAGFLLNNAIIQYAINFLANKKYTPVYP 240
Query: 171 PFFMRKEVMQEVAQLAQFDEELYKV------------IGKGEKVGDSAPEKDELDDKYLI 218
PFFM+K +M+E A+L F+E LYK+ I + + EK DD +LI
Sbjct: 241 PFFMKKNIMEECAELNDFEETLYKISSSSVASAEDKNIDANSGNNNISNEKSNKDDLFLI 300
Query: 219 ATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
ATSEQP+CA+HRD L LP++Y+G+S+CFR+E
Sbjct: 301 ATSEQPLCALHRDETLESKYLPLKYVGISSCFRKE 335
>gi|242399373|ref|YP_002994797.1| Seryl-tRNA synthetase [Thermococcus sibiricus MM 739]
gi|259516210|sp|C6A4A3.1|SYS_THESM RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|242265766|gb|ACS90448.1| Seryl-tRNA synthetase [Thermococcus sibiricus MM 739]
Length = 455
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 141/456 (30%), Positives = 210/456 (46%), Gaps = 121/456 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
++D+ L R +P+ ++ + ++ + + +D+++E D KWR+ + +N + +N
Sbjct: 1 MIDIKLIRE----NPDLIKGDLIKRGELEKLRWIDEILELDKKWRENLKEINNLRRERNK 56
Query: 60 CSKVIGEKMKAKEPVGDS-----------------------------STLPGNHLHPSVP 90
+ IG++ K+ E + + LP N H SVP
Sbjct: 57 LAIEIGKRKKSGEAIDELIKKSDNIAKRIEEIEKENNIIREKIDYYLWRLP-NITHESVP 115
Query: 91 VSNNEDENGIVRTKGDTEV--------------RKKYS--------HVDLITMIDGVDSE 128
+ ++ EN +R G V + KY H DL+ I G D E
Sbjct: 116 IGKDDTENVPIRFWGKARVWEGHLETFLEQSQGKMKYETITWKPELHADLLPKIGGADLE 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R ++L V L + L+++AL K IEKG+ P+ P+ +RK V + V F
Sbjct: 176 RAAKVSGARFFYLLNELVILDLSLIRFALDKLIEKGFIPVIPPYMVRKYVEEGVTSFGDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
++ +YK+ G +D YLI TSE P+ +H + L +LPI Y GVS
Sbjct: 236 EDVIYKIEG---------------EDLYLIPTSEHPLAGMHSNEILDGHNLPILYAGVSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YR+
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYARPEESWEWHEKLLQNAEEIFQALEIPYRI 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L +AAAKK D+EAW G FRE+VSCSNC ++Q+RRL +R+ K NEK
Sbjct: 341 VNICTGDLGYAAAKKYDIEAWMSAQGKFREVVSCSNCTEWQARRLNIRF--RDKPNEKPR 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCL 358
FVH LN+TA AT+R I AI+E Q E G V+IP L
Sbjct: 399 FVHTLNSTAIATSRAIVAIIENFQEEDGTVKIPKAL 434
>gi|154312138|ref|XP_001555397.1| hypothetical protein BC1G_06102 [Botryotinia fuckeliana B05.10]
Length = 271
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/267 (43%), Positives = 142/267 (53%), Gaps = 62/267 (23%)
Query: 179 MQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEAS 238
M + AQL QFDEELYKV+ + D +DKYLIATSEQPI A H D WL
Sbjct: 1 MAKTAQLEQFDEELYKVV-----------DGDAQNDKYLIATSEQPISAFHADEWLTAKD 49
Query: 239 LPIRYLGVSTCFRQE--------------------------DLTKS-------------- 258
+PIRY G S+C+R+E D KS
Sbjct: 50 MPIRYAGFSSCYRREAGSHGRDAWGIFRVHQFEKIEQFVLTDPEKSWEEFDRMISFSEEF 109
Query: 259 -----IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG 313
+ YRVV IVSGALN+AAAKK DLEAWFP G ++ELVSCSNC DYQSR L +RYG
Sbjct: 110 YQSLGVPYRVVAIVSGALNNAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRYG 169
Query: 314 QTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE- 372
+ + +VH LN+T CAT R +C +LE QTE G +P LRK++P A E
Sbjct: 170 PKTQTGIRKNYVHALNSTLCATERALCCLLENFQTEEGFNVPAPLRKYLPG-----APEF 224
Query: 373 IPFVKTAPIDEEETKKQKKQKEGMKKK 399
IPF K P D K + K ++ K K
Sbjct: 225 IPFSKELPKDTTSQKAKGKAEKAPKPK 251
>gi|375083100|ref|ZP_09730133.1| seryl-tRNA synthetase [Thermococcus litoralis DSM 5473]
gi|374742228|gb|EHR78633.1| seryl-tRNA synthetase [Thermococcus litoralis DSM 5473]
Length = 455
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/456 (31%), Positives = 207/456 (45%), Gaps = 121/456 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ L R +P+ V+ + ++ + ++ +D+++E D KWR+ K + + +N
Sbjct: 1 MLDIKLIRE----NPDLVKGDLIKRGELEKLKWIDEILELDEKWRENLKKINLLRRERNR 56
Query: 60 CSKVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVP 90
+ IG++ KA EPV + LP N H SVP
Sbjct: 57 LAVEIGKRKKAGEPVEELLAKSNEIVRQIEEIEKENREIKEKIDYYLWRLP-NITHESVP 115
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS----------------------HVDLITMIDGVDSE 128
+ ++ EN ++ G V K + H DL+ + G D E
Sbjct: 116 IGKDDTENVPIKFWGKARVWKGHLESFLEQSQGKMEYEVIEWKPQLHADLLPKLGGADFE 175
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
A V+G R ++L V L + L+++AL K IEKG+ P+ P+ +R+ V + V F
Sbjct: 176 RAAKVSGSRFFYLLNEIVILDLALIRFALDKLIEKGFIPVIPPYMVRRYVEEGVTSFDDF 235
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
+ +YKV G +D YLI TSE P+ +H + L LP+ Y GVS
Sbjct: 236 ENVIYKVEG---------------EDLYLIPTSEHPLAGLHANEILDGNDLPLLYAGVSP 280
Query: 249 CFRQEDLTKS---------------------------------------------IAYRV 263
CFR+E T I YRV
Sbjct: 281 CFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKLLQNAEEIFQALEIPYRV 340
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
VNI +G L + AAKK D+EAW G FRE+VSCSNC ++Q+RRL +R+ K NEK
Sbjct: 341 VNICTGDLGYVAAKKYDIEAWMSAQGKFREVVSCSNCTEWQARRLNIRF--RDKPNEKPR 398
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCL 358
FVH LN+TA AT+R I AI+E Q E G V+IP L
Sbjct: 399 FVHTLNSTAIATSRAIVAIIENFQEEDGTVKIPKVL 434
>gi|11499617|ref|NP_070859.1| seryl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
gi|3334361|sp|O28244.1|SYS_ARCFU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|2648500|gb|AAB89219.1| seryl-tRNA synthetase (serS) [Archaeoglobus fulgidus DSM 4304]
Length = 453
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 199/446 (44%), Gaps = 112/446 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS------------K 62
+PE + ++Q+ R +V++VD+ IE D KWR+ + + K +N + K
Sbjct: 11 NPEILYESQRRRGLSVDIVDRAIELDRKWREELKRVNQLRKRRNELARAVKEAKGEERAK 70
Query: 63 VIGEKMKAKEPVGDSS---------------TLPGNHLHPSVPVSNNEDENGIVRTKGDT 107
VI E E V + ++P N +H SVPV ++ EN ++ G
Sbjct: 71 VIEEAKAVSEEVKRAEEELKRLEAELEEVLLSIP-NIIHESVPVGKDDSENVPIKYWGKA 129
Query: 108 EVR----------------------KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
+V K H D + + D E A VAG R Y+L
Sbjct: 130 KVYFEDVDAFVEMTQGMAEYEVTDVKPIGHADAVEIFGWADLERAAKVAGARFYYLLNDL 189
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
V L L YAL ++ +T + P+ MR+E V + F+E +YKV
Sbjct: 190 VWLDFALTMYALDFLRKEDFTIVSPPYMMRREAYSGVTAFSDFEEVIYKV---------- 239
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------- 252
E +D YLIATSE PI A+H L E LP+ Y GVS CFR+
Sbjct: 240 -----EDEDLYLIATSEHPIAAMHMREVLEERELPLLYAGVSPCFRKEAGAHGKDTKGIF 294
Query: 253 ---------------------------EDLTK-----SIAYRVVNIVSGALNHAAAKKLD 280
E++ K I YR+VNI +G L AAKK D
Sbjct: 295 RVHQFNKVEQFVFCLPEQSWEWHEKLIENVEKLWQGLGIPYRIVNICTGDLGIVAAKKYD 354
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
LEAW P +RE+VSCSNC D+QS RL +R+ + + K FVH LN+TA ATTR I
Sbjct: 355 LEAWMPAQAKYREMVSCSNCTDWQSYRLDIRFAEERGKPSK-GFVHTLNSTAIATTRAIT 413
Query: 341 AILETHQTETG-VRIPDCLRKFVPAV 365
AI+E Q E G V IP LRK++ +
Sbjct: 414 AIIENFQLEDGRVEIPRVLRKYLEPI 439
>gi|183231706|ref|XP_001913612.1| seryl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
gi|169802371|gb|EDS89615.1| seryl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 251
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/265 (45%), Positives = 149/265 (56%), Gaps = 61/265 (23%)
Query: 174 MRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD-KYLIATSEQPICAVHRDS 232
MR+E+M + AQL+ FDE LY V G G+ V ELDD KYLIATSEQP+ A+H
Sbjct: 1 MRRELMAKTAQLSDFDETLYHV-GTGKDV--------ELDDQKYLIATSEQPLTALHAGE 51
Query: 233 WLPEASLPIRYLGVSTCFRQE--------------------------------------- 253
W+ LPIRY+G ST FR+E
Sbjct: 52 WILPKQLPIRYMGFSTNFRKEAGAHGKDTWGIFRVHQFEKIEQFCMTLPDKSWEMHEEMI 111
Query: 254 ----DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRR 307
D +S I YRVVNIVSGALN+AAAKK DLE +FPG +RELVSCSNC DYQSR
Sbjct: 112 KNSRDFFESLKIPYRVVNIVSGALNNAAAKKYDLEGYFPGFNEYRELVSCSNCTDYQSRE 171
Query: 308 LLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 367
L VR QT K ++ +VHMLN+T CAT R +C ILE +Q E G+ +P+ LR +V V
Sbjct: 172 LEVRL-QTDKKDKTKSYVHMLNSTLCATERALCCILENYQCEDGIIVPEVLRPYVGGV-- 228
Query: 368 NEAGEIPFVKTAPIDEEETKKQKKQ 392
+IPF+ P+ +E KK K+
Sbjct: 229 ---EKIPFIAPKPVWAKEEKKSTKK 250
>gi|284161908|ref|YP_003400531.1| seryl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
gi|284011905|gb|ADB57858.1| seryl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
Length = 454
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/444 (31%), Positives = 200/444 (45%), Gaps = 110/444 (24%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPV 74
+PE + ++QK R +NVE+V K IE D +R+ + D +N S+ I K K++E +
Sbjct: 15 NPEILIESQKRRGENVEIVYKAIELDKLYRKLMKELDELRHDRNRISQEI-RKAKSQELI 73
Query: 75 GDSSTLPG------------------------NHLHPSVPVSNNEDENGIVRTKGDTEVR 110
+ + N +H SVP+ ++++N +R G +V
Sbjct: 74 AKAREISQLIKEKENELKKVEKELKDILLSIPNIIHESVPIGESDEDNVPIRFWGKCKVY 133
Query: 111 KKY-----------------------SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+++ H D + VD+ VAG R Y++ V
Sbjct: 134 REHLDAFLKQTEGFNVDYEVIDKPVIGHADYVEKFGFVDTLKAGKVAGSRFYYMFDDLVW 193
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L L+ YAL ++G+ + P+ + ++ Q V L+ F+E LYK+
Sbjct: 194 LDFALMMYALDFLAKQGFRVVMPPYMLNRKAYQGVTALSDFEEMLYKI------------ 241
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS--------- 258
E +D YLIATSE P+ ++H + L E LP+ Y GVS CFR+E
Sbjct: 242 ---EDEDLYLIATSEHPLASMHMNEVLAEDELPLLYAGVSPCFRKEAGAHGKDTKGIFRV 298
Query: 259 ------------------------------------IAYRVVNIVSGALNHAAAKKLDLE 282
I YRVVN+ SG L A+KK DLE
Sbjct: 299 HIFNKVEQFVYCLPEQSWDWHEKLIENAEKLWQGLGIPYRVVNVCSGDLGIVASKKYDLE 358
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
AW P G FRE+VSCSNC D+QS RL +RY + K K FVH LN+TA ATTR I AI
Sbjct: 359 AWMPAQGKFREMVSCSNCTDWQSFRLNIRYAEKKGAPSK-GFVHTLNSTAIATTRAITAI 417
Query: 343 LETHQTETG-VRIPDCLRKFVPAV 365
+E Q E G V IP LRK++ +
Sbjct: 418 IENFQLEDGRVEIPKVLRKYLEPI 441
>gi|374725188|gb|EHR77268.1| seryl-tRNA synthetase [uncultured marine group II euryarchaeote]
Length = 430
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 207/442 (46%), Gaps = 105/442 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+L+++LFR +P+ +RK+ R + + ++KVIE D W +H+ + KN +
Sbjct: 1 MLEINLFRN----NPDIIRKDHDKRGLSHDNIEKVIELDQTWVNLQHQTNQLRATKNTAA 56
Query: 62 KVIG------EKMKAKEPVGDSSTLPG------------------------NHLHPSVPV 91
+ IG ++ +AK + + + L N LH VP
Sbjct: 57 RGIGAAKKAGDEAEAKRILAEVADLGAQITELEKKTDDAVAQRDKIRMSIPNILHDDVPK 116
Query: 92 SNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
+E N + G D + R +H +LI M VD + A + G R +FLKG
Sbjct: 117 GPDESGNTLHSVHGTKPSFDFDAR---THNELIEMNKWVDLKRAAKIVGSRFFFLKGDLA 173
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
++ L QYA++ E+GYT + P M K+ + V L+ F+ +Y V
Sbjct: 174 RMEFALQQYAVNFIRERGYTFVQPPVMMNKDAYEGVTDLSDFETVMYGV----------- 222
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
E D Y+IAT+E P+ A+ +PE+ LP+R +GVS CFR+E
Sbjct: 223 ----EPDKYYMIATAEHPLTAMFMGETIPESDLPLRIVGVSPCFRREVGSHGQSDLGIWR 278
Query: 254 ------------------------------DLTKSIA--YRVVNIVSGALNHAAAKKLDL 281
DL ++ Y VVNI +G + AAKK DL
Sbjct: 279 VHQFTKIEQIIIASPDQSWELQEELLQNCVDLWDALGMHYEVVNICTGDMGTVAAKKYDL 338
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAW PG+ ++E+VSCSNC DYQ+ RL +RYGQ + I H LN+TA AT+R + A
Sbjct: 339 EAWIPGAEQYKEIVSCSNCTDYQANRLQIRYGQPGHAGQPI--AHTLNSTAVATSRALVA 396
Query: 342 ILETHQTETG-VRIPDCLRKFV 362
I+E +Q E G VRIP+ L+ +
Sbjct: 397 IMEQNQMEDGRVRIPEVLQPLM 418
>gi|242040317|ref|XP_002467553.1| hypothetical protein SORBIDRAFT_01g030086 [Sorghum bicolor]
gi|241921407|gb|EER94551.1| hypothetical protein SORBIDRAFT_01g030086 [Sorghum bicolor]
Length = 219
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 129/231 (55%), Gaps = 60/231 (25%)
Query: 131 AIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE 190
A VAGGRGYFLK V L + L+ + L+ ++G+ P+ TPFFMRKE M++ AQL QFDE
Sbjct: 1 ADVAGGRGYFLKDEGVLLNLALINFGLTFLRKRGFKPMQTPFFMRKETMRKCAQLVQFDE 60
Query: 191 ELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 250
ELYKV G GE +KYLIATSEQP+CA H + LPIRY G STCF
Sbjct: 61 ELYKVTGDGE-------------EKYLIATSEQPMCAYHLGDRIHPDELPIRYAGYSTCF 107
Query: 251 RQ---------------------------------------------EDLTKSIA--YRV 263
R+ ED K I Y+V
Sbjct: 108 RKEAGSHGRDTAGIFRVHQFEKIEQFCITNPNGNDSWEMLEEMIKNSEDFYKEIGLPYQV 167
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ 314
V+IVSGALN AA+KK DLEAWFP S +RELVSCSNC DYQ+RRL + YGQ
Sbjct: 168 VSIVSGALNDAASKKYDLEAWFPASNTYRELVSCSNCTDYQARRLGITYGQ 218
>gi|440704484|ref|ZP_20885330.1| serine--tRNA ligase [Streptomyces turgidiscabies Car8]
gi|440273859|gb|ELP62542.1| serine--tRNA ligase [Streptomyces turgidiscabies Car8]
Length = 429
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 192/438 (43%), Gaps = 97/438 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADERRRASGVRFDELRSEQKSIG 56
Query: 62 KVI--------------------------GEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K+I E+ +A E GN +HP VPV E
Sbjct: 57 KLISKASAEEKAELLKKTGRLAADVKAADAEQHEADEEAKKLLLQLGNLVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R G K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFGAEGFEPK-DHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+TP+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFTPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEILDADKLPMRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ SG L +A++K D EAW
Sbjct: 281 DKVEMFSYVDPADAENEHQRLLDWEKQWLTALELPFQVIDVASGDLGSSASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR T +++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLSVRMRDTSDGKNRVQPLATLNGTLCAVPRTIVAILEN 400
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 401 HQLADGSVRVPEVLRPYL 418
>gi|296242418|ref|YP_003649905.1| seryl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
gi|296095002|gb|ADG90953.1| seryl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
Length = 460
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 201/446 (45%), Gaps = 115/446 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWR-------QFRHKADNFNK------------ 55
+PE ++ + K RF + +VD+ D +WR + RHK + ++
Sbjct: 12 NPELLKAHVKKRFMDTSMVDEAFRLDQEWRRLLTEVQELRHKHNVISREVSKAPPELKEE 71
Query: 56 ----FKNLCSKVIGEKMKAKEPVG---DSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTE 108
K L S++ + K KE D+ N +H SVPV ++ N +R G +
Sbjct: 72 LLRQAKQLLSQLEMFEAKLKELEAQREDALRRLPNTVHESVPVGPDDSYNVPIRFWGKPK 131
Query: 109 VRKKY-------------------------SHVDLITMIDGV-DSEAGAIVAGGRGYFLK 142
V K++ H D++ + + D+ VAG R Y+L
Sbjct: 132 VWKEHVEQFKQQTEKYGFKVDYIEIDWKPIGHADMLENVLKLGDTLKAGEVAGSRFYYLF 191
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
V L + L+ YA+ KGYT + P+ +R EVM V LA F + +YK+ G
Sbjct: 192 NDIVFLDLALLMYAIDYLTSKGYTLVLPPYMLRHEVMSGVIDLATFKDAIYKIEG----- 246
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
+D YLIAT+E + A+H + L E LP++Y G+S CFR+E
Sbjct: 247 ----------EDLYLIATAEHSLAALHYNEDLEEEVLPLKYAGISPCFRKEAGAGSRDLK 296
Query: 254 -----------------------DLTKSI-------------AYRVVNIVSGALNHAAAK 277
DL + + YR+VNI SG L AAK
Sbjct: 297 GIFRVHQFHKIEQYVYAKPEESWDLMEELIGNAEELFKGLELPYRIVNIASGDLGAPAAK 356
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLE W P G FRE+VSCSN D+QS RL R + K M + E+VH LN+TA A+TR
Sbjct: 357 KYDLETWMPAQGLFREMVSCSNTTDWQSYRLRTRLIRRKGMVK--EYVHTLNSTAIASTR 414
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
I AILE HQ E G V IP LRK++
Sbjct: 415 TITAILENHQQEDGTVYIPKVLRKYL 440
>gi|297200865|ref|ZP_06918262.1| seryl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
gi|197716361|gb|EDY60395.1| seryl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
Length = 425
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 195/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSLG 56
Query: 62 KVI--------------GEKMKAKEPVGDSST------------LPGNHLHPSVPVSNNE 95
K+I E++KA +++ GN +HP VPV E
Sbjct: 57 KLIPKATPEERAELLQKAEQLKADVKAAEAAQNDADDETKRLALQLGNLVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R G K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFGAEGFEPK-DHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+TP+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFTPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ SG L +A++K D EAW
Sbjct: 281 DKVEMFSYVAPEDAENEHKRLLDWEKQWLTGLELPFQVIDVASGDLGSSASRKYDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR K K++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQLADGSVRVPEVLRPYL 414
>gi|29830787|ref|NP_825421.1| seryl-tRNA synthetase [Streptomyces avermitilis MA-4680]
gi|46577430|sp|Q82FK8.1|SYS1_STRAW RecName: Full=Serine--tRNA ligase 1; AltName: Full=Seryl-tRNA
synthetase 1; Short=SerRS 1; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase 1
gi|29607900|dbj|BAC71956.1| putative seryl-tRNA synthetase [Streptomyces avermitilis MA-4680]
Length = 425
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 191/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRSEQKALG 56
Query: 62 KVI--------------GEKMKAKEPVGDSSTLP------------GNHLHPSVPVSNNE 95
K+I E++KA D GN +HP VPV E
Sbjct: 57 KLIPKASPEERAELLKKAEQLKADVKAADVEQHEADEEAKRLLLQLGNLVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R G K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFGAEGFEPK-DHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+ P+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFIPMLTPALVRPRAMEGTGFLGQASENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEILDADKLPMRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ SG L +A +K D EAW
Sbjct: 281 DKVEMFSYVAPEDAENEHKRLLEWEKQWLTGLELPFQVIDVASGDLGASATRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR K K++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDSFQARRLSVRMRDGK----KVQPLATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQLPDGSVRVPEMLRPYL 414
>gi|389861465|ref|YP_006363705.1| seryl-tRNA synthetase [Thermogladius cellulolyticus 1633]
gi|388526369|gb|AFK51567.1| seryl-tRNA synthetase [Thermogladius cellulolyticus 1633]
Length = 460
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 206/447 (46%), Gaps = 117/447 (26%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG--------E 66
+PE+++ + K RF +V +VD+ ++ DL+WR+ + N+ S+ + E
Sbjct: 12 NPEELKNHVKKRFMDVSIVDEALKADLEWRRILAEIQELRHKHNVISREVSRLQGPEREE 71
Query: 67 KMK-AKEPVGDSST------------------LPGNHLHPSVPVSNNEDENGIVRTKGDT 107
K+K AKE + LP N +H SVP+ ++ N +R G
Sbjct: 72 KIKEAKELLSLIEVYEKKLSEVEAKREEILLKLP-NIVHESVPIGPDDSYNVPIRFYGRP 130
Query: 108 EVRKKY-------------------------SHVDLITMIDGVDSEAGA-IVAGGRGYFL 141
V K Y H D++ + G+ + A VAG R Y+L
Sbjct: 131 RVWKGYLEQFKQQTEKYGFKVDYELIDWKPVGHADMLENVLGLGNTVKAGEVAGSRFYYL 190
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
V L + L+ YA+ +GYT + P+ +R + +Q V A F + +YKV G
Sbjct: 191 FDDIVFLDMALLAYAIDYLTSRGYTLVLPPYMLRFKYIQGVLDYATFKDAIYKVEG---- 246
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ--------- 252
+D YLIAT+E + A+H D +PE +LP++Y+GVS CFR+
Sbjct: 247 -----------EDLYLIATAEHSLAALHADEDIPEEALPLKYVGVSPCFRKEAGAGSRDL 295
Query: 253 ----------------------------------EDLTKS--IAYRVVNIVSGALNHAAA 276
E+L K + YRVVNI SG L AA
Sbjct: 296 KGIFRVHQFHKVEQFVYAKPEESWDVMEELINNAEELFKGLELPYRVVNIASGDLGAPAA 355
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
KK DLE W P G +RE+VSCSN D+Q+ RL +R + K M + E+VH LN+TA A+T
Sbjct: 356 KKYDLETWMPAQGLYREMVSCSNVTDWQAYRLKIRLVRRKGMVK--EYVHTLNSTAIAST 413
Query: 337 RVICAILETHQTETG-VRIPDCLRKFV 362
R I +ILE +Q G V +P LRK++
Sbjct: 414 RTITSILENYQEPDGVVVVPRALRKYL 440
>gi|323305586|gb|EGA59327.1| Ses1p [Saccharomyces cerevisiae FostersB]
Length = 250
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/254 (42%), Positives = 138/254 (54%), Gaps = 64/254 (25%)
Query: 174 MRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 233
M KE+M + AQL++FDEELYKVI D D+KYLIATSEQPI A H W
Sbjct: 1 MNKELMSKTAQLSEFDEELYKVI-------------DGEDEKYLIATSEQPISAYHSGEW 47
Query: 234 L--PEASLPIRYLGVSTCFRQE-------------------------------------- 253
P+ LPI Y+G S+CFR+E
Sbjct: 48 FEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVITEPEKSWEEFEKM 107
Query: 254 -----DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSR 306
+ KS+ YR+V IVSG LN+AAAKK DLEAWFP ++ELVSCSNC DYQSR
Sbjct: 108 ISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSR 167
Query: 307 RLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVY 366
L +R G K + + ++VH LN+T AT R +C ILE +QTE G+ +P+ LRK++P
Sbjct: 168 NLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCILENYQTEDGLVVPEVLRKYIPG-- 225
Query: 367 VNEAGEIPFVKTAP 380
E +PFV P
Sbjct: 226 --EPEFLPFVNELP 237
>gi|323309504|gb|EGA62715.1| Ses1p [Saccharomyces cerevisiae FostersO]
Length = 250
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/254 (42%), Positives = 138/254 (54%), Gaps = 64/254 (25%)
Query: 174 MRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 233
M KE+M + AQL++FDEELYKVI D D+KYLIATSEQPI A H W
Sbjct: 1 MNKELMSKTAQLSEFDEELYKVI-------------DGEDEKYLIATSEQPISAYHSGEW 47
Query: 234 L--PEASLPIRYLGVSTCFRQE-------------------------------------- 253
P+ LPI Y+G S+CFR+E
Sbjct: 48 FEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVITEPEKSWEEFEKM 107
Query: 254 -----DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSR 306
+ KS+ YR+V IVSG LN+AAAKK DLEAWFP ++ELVSCSNC DYQSR
Sbjct: 108 ISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSR 167
Query: 307 RLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVY 366
L +R G K + + ++VH LN+T AT R +C ILE +QTE G+ +P+ LRK++P
Sbjct: 168 NLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCILENYQTEDGLVVPEVLRKYIPG-- 225
Query: 367 VNEAGEIPFVKTAP 380
E +PFV P
Sbjct: 226 --EPEFLPFVNELP 237
>gi|365761570|gb|EHN03215.1| Ses1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 251
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 136/254 (53%), Gaps = 64/254 (25%)
Query: 174 MRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 233
M KEVM + AQL+QFDEELYKVI D D+KYLIATSEQPI A H W
Sbjct: 2 MNKEVMAKTAQLSQFDEELYKVI-------------DGEDEKYLIATSEQPISAYHSGEW 48
Query: 234 L--PEASLPIRYLGVSTCFRQE-------------------------------------- 253
P+ LPI Y G S+CFR+E
Sbjct: 49 FEKPQEQLPIHYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFEKM 108
Query: 254 -----DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSR 306
+ KS+ YR+V IVSG LN+AAAKK DLEAWFP ++ELVSCSNC DYQSR
Sbjct: 109 ISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSR 168
Query: 307 RLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVY 366
L +R G K + + ++VH LN+T AT R +C ILE +Q E G+ +P+ LRK++P
Sbjct: 169 NLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCILENYQNEDGLVVPEVLRKYIPG-- 226
Query: 367 VNEAGEIPFVKTAP 380
E +PFV P
Sbjct: 227 --EPEFLPFVNELP 238
>gi|162606512|ref|XP_001713286.1| seryl-tRNA synthetase (serin-tRNA ligase) [Guillardia theta]
gi|12580752|emb|CAC27070.1| seryl-tRNA synthetase (serin-tRNA ligase) [Guillardia theta]
Length = 425
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 201/416 (48%), Gaps = 77/416 (18%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFK-NVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
VL LD+ + +K +K++ +K F N ++++I + K N+ +F L
Sbjct: 35 VLILDIIQKKKNNQFDKIKNEKKKIFNHNRSTLNQLI-------TLKTKKTNYYEF--LI 85
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGI--VRTKGDTEVRKKYSHVDL 118
K+I K +G S N LH S +N + + + R +KK +HV+L
Sbjct: 86 QKLIRT---FKFFLGFLSNFFTNFLHNSNFFFSNSNSSRVEFSRVNFSLNNKKKTNHVEL 142
Query: 119 ITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEV 178
+ + VD + G V+G R Y+L GP V L + L+QY L +++ + + TPF+M +++
Sbjct: 143 LKNLRIVDYKRGVKVSGNRAYYLIGPGVSLNLALIQYGLDFMLKRNFISIQTPFYMNEKI 202
Query: 179 MQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEAS 238
++ QL F E+LY +GK D K+LIATSEQ ICA H +
Sbjct: 203 LKCCVQLQDFIEQLYS-MGKN-------------DKKFLIATSEQTICAFHFKEKIHAEY 248
Query: 239 LPIRYLGVSTCFRQE--------------------------------------------- 253
LP++Y+G+STCFR+E
Sbjct: 249 LPLKYVGISTCFRKESGSHGKDTNGIFRVHQFEKIEQFIICNSDKYESWKFFEILISNSK 308
Query: 254 DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVR 311
+ KS I + +NI + LN A++K DL WFP ++ELVSCSNCL+YQS L +
Sbjct: 309 EFYKSLQIPFICINIPTIDLNKTASRKTDLLGWFPSGSNYKELVSCSNCLEYQSENLYIE 368
Query: 312 YGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 367
+ + +K ++HMLN+T CATTR IC I E + G+ IP+ LR ++ ++
Sbjct: 369 TYKNGILPQK-SYLHMLNSTLCATTRTICCIAENYSENNGLTIPNALRDYLGFSFI 423
>gi|395645605|ref|ZP_10433465.1| Seryl-tRNA synthetase [Methanofollis liminatans DSM 4140]
gi|395442345|gb|EJG07102.1| Seryl-tRNA synthetase [Methanofollis liminatans DSM 4140]
Length = 425
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/439 (30%), Positives = 203/439 (46%), Gaps = 98/439 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKN--QKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+L+L R +PE VR + ++ + V VD ++E D K R+ + D +N+
Sbjct: 1 MLELKFIR----ANPEIVRADLLKRGYTEKVAWVDDLLEKDQKSREITIEVDRLRNRRNV 56
Query: 60 CSKVIGEKMKAKEPVG----DSSTLPG------------------------NHLHPSVPV 91
+ I E KA + +++ +PG N LH SVPV
Sbjct: 57 IGREINETRKAGGDIAGLLKEAAAIPGEIKEAEAELQAITERVHYYLMRLPNILHESVPV 116
Query: 92 SNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
++ EN V+ G+ +V + +H +L D E A V+G Y+LKG V L
Sbjct: 117 GKDDTENVEVKRWGEPKVPPFELRNHGELAAEQGWADFERAAKVSGSGFYYLKGRLVLLD 176
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L ++AL + +GYTPL P+ M + + V LA F++ +YK+ G
Sbjct: 177 MALQRFALDLLVGRGYTPLSPPYMMNRAAYEGVTDLADFEDVMYKIDG------------ 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKSI---------- 259
+D YLIATSE P+ A+++D E LP+++ G+S CFR+E + I
Sbjct: 225 ---EDAYLIATSEHPMAAMYKDEIFEEKDLPLKFAGISPCFRKEIGSHGIDTKGLFRVHQ 281
Query: 260 -----------------------------------AYRVVNIVSGALNHAAAKKLDLEAW 284
Y VVNI +G + AAKK D+E W
Sbjct: 282 FNKIEQFIFCRPEESWAFHEELLANAEAIFQGLGLPYHVVNICTGDIGTVAAKKYDIEVW 341
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P +RE VSCSNC YQ+ RL ++ + EK ++VH LN+TA AT+R I AILE
Sbjct: 342 MPRENMYREAVSCSNCTSYQAVRLNIKVRDPAEFKEK-QYVHTLNSTAIATSRAIRAILE 400
Query: 345 THQTETG-VRIPDCLRKFV 362
+Q E G V IP+ LR ++
Sbjct: 401 NNQQEDGSVVIPEALRPYM 419
>gi|393796812|ref|ZP_10380176.1| seryl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia BG20]
Length = 420
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 202/435 (46%), Gaps = 109/435 (25%)
Query: 15 DPEKVRKNQKD-----RFKNVEL-VDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKM 68
DP+ ++ N + + +NVE D++I+ D K R+F K D K KN + I +K
Sbjct: 3 DPKIIKDNHQMIREMIKARNVEYDFDELIDVDQKRREFIIKTDELRKKKNQIAMEISQKK 62
Query: 69 KAKEPVGDSSTLPG------------------------------NHLHPSVPVSNNEDEN 98
KA + + SSTL N +H SVP+ +E N
Sbjct: 63 KAGQDI--SSTLDEMKNISAELTKLETLQIEIEKKYSSLALSIPNLIHESVPLGKDETAN 120
Query: 99 GIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
++ G D ++ H+D+ +D VD E A VAG R Y+LK V L L+
Sbjct: 121 KEIKKWGKIPEFDFKIN---DHIDISEKLDLVDLERAAKVAGARFYYLKNDLVRLNQSLI 177
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
YAL EK Y+ + P+ + ++ M+ F+E +YK+ E +
Sbjct: 178 HYALDFLAEKNYSLIQPPYMINRQSMEGAVIANDFEEVIYKI---------------ENE 222
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------- 254
D Y+I TSE + A+H D + LP+RY GVS CFR+E
Sbjct: 223 DLYMIGTSEHAMAAMHSDEIIEGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVHQFDKI 282
Query: 255 ----LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 288
T+ I Y+V+ + SG + +AK D+EAW G
Sbjct: 283 EQFVFTRPDESWDEHEKMLSNAEEFYQKLEIPYKVLLLSSGDMGKVSAKTYDIEAWMAGQ 342
Query: 289 GAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQT 348
A+RE+VSCSNCLDYQ+RRL +R+ K NE +++H LN+T AT+RV+ +I+E QT
Sbjct: 343 NAYREIVSCSNCLDYQARRLKIRF--RDKTNEDTQYLHTLNSTLIATSRVLVSIMENFQT 400
Query: 349 ETG-VRIPDCLRKFV 362
+ G + IP L+K++
Sbjct: 401 KDGHITIPKVLQKYM 415
>gi|13541818|ref|NP_111506.1| seryl-tRNA synthetase [Thermoplasma volcanium GSS1]
gi|30173200|sp|Q979Z3.1|SYS_THEVO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|14325255|dbj|BAB60159.1| tRNA synthetase Ser [Thermoplasma volcanium GSS1]
Length = 441
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 138/463 (29%), Positives = 208/463 (44%), Gaps = 120/463 (25%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D+ L R+ + E KN + R + ++D+ + D +WR + + KN +
Sbjct: 1 MIDVKLLRSNR----ELFEKNCEYRGVDKAIIDQFFKLDEEWRSVNRELNGQRAEKNRMT 56
Query: 62 KVIGEKMKAKEPVGDSS-----------------------------TLPGNHLHPSVPVS 92
+ I E +K + V + T+P N +H SVP+
Sbjct: 57 RAIAESLKRGKIVSNEKDRVELINEKIVSLEKKIREIEEERDRVLWTIP-NLIHESVPIC 115
Query: 93 NNEDENGIVRT--------------------KGDTEV--RKKYSHVDLITMIDGVDSEAG 130
++ N IVR GD EV + SHVDL + +D E+
Sbjct: 116 FGDENNKIVRYVGHAKVYRDDEEEFLKGSGGNGDYEVIDERPKSHVDLGQELGIIDLESA 175
Query: 131 AIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE 190
A ++G R YF+K + L++ L YA+ ++G+T + P+ + E M+ L F +
Sbjct: 176 AKISGARFYFIKNRLLKLEMALENYAVDFLSQRGFTVVEPPYMLNLESMRGATDLETFKD 235
Query: 191 ELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 250
LYK+ E +D YLIATSE I ++ + +L E LPIR GVS CF
Sbjct: 236 TLYKI---------------EDEDLYLIATSEHSIASMLSNEFLEEKELPIRVAGVSACF 280
Query: 251 RQE-------------------------------------------DLTKS--IAYRVVN 265
R+E ++ +S I YRVVN
Sbjct: 281 RREAGAHGKDTKGIFRVHQFNKIEQFIFCKPEDSWDYLEEILSNAEEIYRSLGIPYRVVN 340
Query: 266 IVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFV 325
+ SG L AAKK D+EAWFP G FRE+VS SN DYQ+R L ++Y ++ EFV
Sbjct: 341 VCSGELGRLAAKKYDIEAWFPAQGKFREIVSASNDTDYQARSLNIKYRKSGGN----EFV 396
Query: 326 HMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVN 368
H LN+TA ATTR++ AI+E Q + +RIPD L + Y++
Sbjct: 397 HTLNSTAIATTRILVAIMENFQEDGRIRIPDVLVPYTGFQYID 439
>gi|329766549|ref|ZP_08258092.1| seryl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329136804|gb|EGG41097.1| seryl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 420
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 202/435 (46%), Gaps = 109/435 (25%)
Query: 15 DPEKVRKNQKD-----RFKNVEL-VDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKM 68
DP+ ++ N + + +NVE D++I+ D K R+F K D K KN + I +K
Sbjct: 3 DPKIIKDNHQMIREMIKARNVEYDFDELIDVDQKRREFIIKTDELRKKKNQIAMEISQKK 62
Query: 69 KAKEPVGDSSTLPG------------------------------NHLHPSVPVSNNEDEN 98
KA + + SSTL N +H SVP+ +E N
Sbjct: 63 KAGQDI--SSTLDEMKNISAELAKLETLQIEIEKKYSSLALSIPNLIHESVPLGKDETAN 120
Query: 99 GIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
++ G D ++ H+D+ +D VD E A VAG R Y+LK V L L+
Sbjct: 121 KEIKKWGKIPEFDFKIN---DHIDISENLDLVDLERAAKVAGARFYYLKNDLVRLNQSLI 177
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
YAL EK Y+ + P+ + ++ M+ F+E +YK+ E +
Sbjct: 178 HYALDFLAEKNYSLIQPPYMINRQSMEGAVIANDFEEVIYKI---------------ENE 222
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------- 254
D Y+I TSE + A+H D + LP+RY GVS CFR+E
Sbjct: 223 DLYMIGTSEHAMAAMHSDEIIEGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVHQFDKI 282
Query: 255 ----LTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 288
T+ I Y+V+ + SG + +AK D+EAW G
Sbjct: 283 EQFVFTRPDESWDEHEKMLSNAEEFYQKLEIPYKVLLLSSGDMGKVSAKTYDIEAWMAGQ 342
Query: 289 GAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQT 348
A+RE+VSCSNCLDYQ+RRL +R+ K NE +++H LN+T AT+RV+ +I+E QT
Sbjct: 343 NAYREIVSCSNCLDYQARRLKIRF--RDKTNEDTQYLHTLNSTLIATSRVLVSIMENFQT 400
Query: 349 ETG-VRIPDCLRKFV 362
+ G + IP L+K++
Sbjct: 401 KDGHITIPKVLQKYM 415
>gi|24429894|gb|AAN52758.1| seryl-aminoacyl-tRNA synthetase BLES02 [Rattus norvegicus]
Length = 177
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/137 (67%), Positives = 105/137 (76%), Gaps = 6/137 (4%)
Query: 118 LITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKE 177
L+ M+DG + E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKE
Sbjct: 1 LVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKE 60
Query: 178 VMQEVAQLAQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPE 236
VMQEVAQL+QFDEELYKVIGKG EK DS+ D+KYLIATSEQPI A+HRD WL
Sbjct: 61 VMQEVAQLSQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRP 115
Query: 237 ASLPIRYLGVSTCFRQE 253
LPI+Y G STCFRQE
Sbjct: 116 EDLPIKYAGFSTCFRQE 132
>gi|88603748|ref|YP_503926.1| seryl-tRNA synthetase [Methanospirillum hungatei JF-1]
gi|121721452|sp|Q2FS27.1|SYS_METHJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|88189210|gb|ABD42207.1| seryl-tRNA synthetase [Methanospirillum hungatei JF-1]
Length = 425
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/439 (30%), Positives = 205/439 (46%), Gaps = 98/439 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDR--FKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LD+ R +P+ +R++ K R + + +D ++ D++ R+ + + + +N
Sbjct: 1 MLDIRFVR----ANPDAIREDLKKRNDMEKLAWIDDLLVQDIRHRELIGQTNELRRRRNS 56
Query: 60 CSKVIGEKMKAKEP----VGDSSTLPG------------------------NHLHPSVPV 91
S I KA E + +++ LPG N LH SVPV
Sbjct: 57 ISYDINRAKKAGEDASALIAEAAGLPGRIKENEAEMEEISKKIRYYLMRIPNILHESVPV 116
Query: 92 SNNEDENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
++ +N V+ G T + +H L D D E +G YFLKG V L
Sbjct: 117 GADDTQNVEVKRYGTPRTFTFELKNHGQLAADNDWADFERATKTSGAGFYFLKGNLVLLD 176
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L +++L +EKGYTP+ P+ + ++ +EV L F++ +YK+
Sbjct: 177 LALQRFSLDILMEKGYTPIIPPYMINRKSYEEVTDLDDFEKVMYKI-------------- 222
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
E DD YLIATSE P+ A+++D E LP+R G+S CFR+
Sbjct: 223 -EDDDAYLIATSEHPMAAMYQDEIFEEKDLPLRLAGLSPCFRREIGSHGLDTKGLFRVHQ 281
Query: 253 -------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAW 284
E+L ++ I YRVVNI +G + AAKK D+EAW
Sbjct: 282 FHKVEQFVYCHPDDSWTIHEELRENAEEIFQKLEIPYRVVNICTGDIGTVAAKKYDIEAW 341
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P +RE+VSCSNC YQ+ RL +R + K +FVH LN+TA AT+R + AILE
Sbjct: 342 MPRENEYREVVSCSNCTTYQAVRLNIRVRDKEDFESK-QFVHTLNSTAIATSRAMRAILE 400
Query: 345 THQTETG-VRIPDCLRKFV 362
+Q E G V IP LR ++
Sbjct: 401 NNQQEDGSVVIPKVLRPYM 419
>gi|388254915|gb|AFK25028.1| seryl-tRNA synthetase [uncultured archaeon]
Length = 420
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 195/432 (45%), Gaps = 102/432 (23%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPVG 75
P+ +RK +DR +L D ++E D K R+ K D + +N S I K K+ +
Sbjct: 11 PDLIRKMLQDRRIKYDL-DGLVELDAKRRELIIKTDELRRKRNQVSVEISAKKKSGQDAS 69
Query: 76 DSST-----------------------------LPGNHLHPSVPVSNNEDENGIVRTKG- 105
DS + +P N +H SVP+ +E N +R G
Sbjct: 70 DSISQMQAVSAELTALEAEQLKVEAQYNKLVLSIP-NLIHESVPIGPDESANKEIRRWGE 128
Query: 106 ----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWI 161
D +V+ H+D+ +D VD E A AG R Y+LK V L L+ +AL
Sbjct: 129 VPKFDFKVK---DHIDIAQSLDLVDLERAAKAAGARFYYLKNQLVRLNQALIGFALDFLE 185
Query: 162 EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
K YT + P+ + K M+ F + +YKV G +D +LI TS
Sbjct: 186 SKKYTLIQPPYLINKSSMEGAIIADDFTDVIYKVDG---------------EDLFLIGTS 230
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------------- 253
E I A+H D L LP+RY GVS CFR+E
Sbjct: 231 EHAIAAMHSDEILQGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVHQFEKVEQYVFARP 290
Query: 254 -DLTK----------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVS 296
D K I YRV+ + SG L +AK DLEAW G A+RE+VS
Sbjct: 291 EDSWKEHESMLAIVEEFYQHLGIPYRVMVLSSGDLGKVSAKTYDLEAWMAGQNAYREIVS 350
Query: 297 CSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIP 355
CSNCLD+Q+RRL +R+ K NE+ ++VH LN+T ATTR + AI+E QT G + +P
Sbjct: 351 CSNCLDFQTRRLKIRF--RDKTNEQTQYVHSLNSTLVATTRTLVAIMENFQTRDGHISVP 408
Query: 356 DCLRKFVPAVYV 367
L+K++ + +
Sbjct: 409 KPLQKYLGSALI 420
>gi|424813645|ref|ZP_18238833.1| seryl-tRNA synthetase [Candidatus Nanosalina sp. J07AB43]
gi|339758591|gb|EGQ43846.1| seryl-tRNA synthetase [Candidatus Nanosalina sp. J07AB43]
Length = 424
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 201/432 (46%), Gaps = 94/432 (21%)
Query: 7 LFRTEKGGD-PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG 65
+ R E+ D P+++++++ R K+ E VDK IE D WR+ K + +N I
Sbjct: 1 MLRIERFRDNPDEIKESEDYRGKDPEKVDKAIELDKAWRENLQKLQELQERRNEVGDKIA 60
Query: 66 E-------------KMK-AKEPVG-----------DSSTLP---GNHLHPSVPVSNNEDE 97
E KM+ K+ + D L GN + SVP +ED+
Sbjct: 61 EMKQNGKDASEHIEKMQEVKDTINELEDEVEKLKTDRDELRMKIGNIVEDSVPQGEDEDD 120
Query: 98 NGIVRTKGDTEVRKKYSHV--DLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
N ++ E + K + D++ D +++E A VAG R Y+LK V L L+ Y
Sbjct: 121 NVPIKHWEPEEGKSKSGELAADVLEDTDLLETEKAAEVAGERAYYLKNELVRLNQALINY 180
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
L K EK YTP+ TP+ + KE M+ A+L F E+LYK+ + ++
Sbjct: 181 GLDKMQEKNYTPMQTPYMLNKEAMEGAAELEDFHEQLYKL---------------DRHER 225
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------- 253
YLIATSEQ + A H D L LP +Y G ST FR+E
Sbjct: 226 YLIATSEQTLAAYHFDEILQPQELPRKYAGYSTNFRREAGKHGQQTRGIWRLHQFEKIEQ 285
Query: 254 ----------DLTK-------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
DL ++ YRVVN+ +G L AKK D+EAW P
Sbjct: 286 FIFCKPEESQDLHDELLENAEEVMKDLNLPYRVVNVCTGDLGDTPAKKYDIEAWRPSLEE 345
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+ E+VSCSNC +YQ +L R ++ + + VH LN+T AT R++ I+E +QTE
Sbjct: 346 YGEVVSCSNCTEYQGTKLKTR---IRRQDSDNQTVHTLNSTLIATQRLMTIIIENNQTER 402
Query: 351 GVRIPDCLRKFV 362
G+++P+ L+ ++
Sbjct: 403 GIKVPEALQGYM 414
>gi|395772032|ref|ZP_10452547.1| seryl-tRNA ligase [Streptomyces acidiscabies 84-104]
Length = 425
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 197/440 (44%), Gaps = 105/440 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIEND-------LKWRQFR------- 47
++DL L R DP++VR +Q+ R ++V LVD ++ D +++ + R
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKQLG 56
Query: 48 ---------HKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ K L S V + ++ L GN +HP VPV E
Sbjct: 57 KLIPKAAGDEKAELLKKASQLASDVKAADAERDAADTETHELLLRLGNLVHPDVPVGGEE 116
Query: 96 DENGIVRTKGDTEVR-------KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
D V + E+R + H++L ++ +D E GA V+G R YFL G L
Sbjct: 117 D---FVTLETHGEIRDFSAEGFEPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALL 173
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
++ LV A+S+ G+TP+ TP +R + M L Q +++Y +
Sbjct: 174 ELALVNAAISQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHL------------- 220
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED-------------- 254
+ DD YL+ TSE + A H D L LP+RY G S CFR+E
Sbjct: 221 --DKDDLYLVGTSEVALAAYHMDEILDAERLPLRYAGFSPCFRREAGSHGKDTKGIFRVH 278
Query: 255 ------------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEA 283
LT + +RV+++ +G L +AA+K D EA
Sbjct: 279 QFDKVEMFSYVAPEDSEAEHRRLLEWEKQWLTSLELPFRVIDVATGDLGSSAARKFDCEA 338
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
W P G +REL S S+C ++QSRRL +RY + K + + LN T CA R I AIL
Sbjct: 339 WIPTQGKYRELTSTSDCTEFQSRRLSIRYREGKTVRP----LATLNGTLCAVPRTIVAIL 394
Query: 344 ETHQTETG-VRIPDCLRKFV 362
E HQ G VR+P+ LR F+
Sbjct: 395 ENHQQADGSVRVPEVLRPFL 414
>gi|441142673|ref|ZP_20962541.1| seryl-tRNA ligase [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440622618|gb|ELQ85397.1| seryl-tRNA ligase [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 429
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 193/438 (44%), Gaps = 97/438 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADERRRTSSVRFDELRAEQKSLG 56
Query: 62 KVI--------------------------GEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K+I E+ +AKE GN +HP VPV E
Sbjct: 57 KLIPKATGDEKAALLKKAGELSAAVKAADAEQDEAKEETQSLLLRLGNLVHPDVPVGGEE 116
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D ++ T G E + H++L + +D E A V+G R Y+L G L++
Sbjct: 117 DFT-VLETVGTPRDFAAEGFEPKDHLELGQALGAIDVERAAKVSGSRFYYLTGIGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+TP+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFTPMLTPALVRPHAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIVDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVDPEDAQAEHQRLLDWEKQWLTGLELPFQVIDVATGDLGASASRKYDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC ++Q+RRL VR K ++++ + LN T CA R I AI E
Sbjct: 341 PTQGKYRELTSASNCDEFQARRLSVRMRTNKDGKQQVKPLATLNGTLCAVPRTIVAIFEN 400
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 401 HQQADGSVRVPELLRPYL 418
>gi|386384946|ref|ZP_10070278.1| seryl-tRNA synthetase [Streptomyces tsukubaensis NRRL18488]
gi|385667588|gb|EIF90999.1| seryl-tRNA synthetase [Streptomyces tsukubaensis NRRL18488]
Length = 425
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 192/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++VELVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVELVDALLSADERRRSSGVRFDELRSEQKSLG 56
Query: 62 KVI--------------GEKMKAKEPVGDSSTLPGNH------------LHPSVPVSNNE 95
+++ E++KA +++ + +HP VPV E
Sbjct: 57 RLVSKASPEERAELLTRAEQLKADVKAAEAAQNEADEETRGLLLRLGNLVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R E + H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFA-AEGFEPRDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+ P+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFIPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEILDAEKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ S L +A++K D EAW
Sbjct: 281 DKVEMFSYVAPEDAEAEHRRLLEWEKQWLTSLELPFQVIDVASADLGSSASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VRY KK V LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLSVRYRDGKKTQP----VATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQLADGSVRVPEALRPYL 414
>gi|302535646|ref|ZP_07287988.1| seryl-tRNA synthetase [Streptomyces sp. C]
gi|302444541|gb|EFL16357.1| seryl-tRNA synthetase [Streptomyces sp. C]
Length = 425
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 189/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++VELVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVELVDALLSADERRRSSGMRFDELRNEQKSLG 56
Query: 62 KVI--------------------------GEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K+I E+ +A E GN +H VPV E
Sbjct: 57 KLIPKASPEERAELLTKAEQLKQDVKAAEAEQNEADEAAKQLLLKLGNIVHEDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R G E H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFTVLETHGTIRDFG-AEGFAPRDHLELGESLGAIDVERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+ P+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFIPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDAEKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVAPEDAEAEHKRLLEWEKQWLTSLELPFQVIDVATGDLGASASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL +RY KK + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLAIRYRDGKKTAP----LSTLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P LR ++
Sbjct: 397 HQQADGSVRVPPVLRPYL 414
>gi|70607320|ref|YP_256190.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
gi|449067563|ref|YP_007434645.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius N8]
gi|449069837|ref|YP_007436918.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius Ron12/I]
gi|76363444|sp|Q4J8I4.1|SYS_SULAC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|68567968|gb|AAY80897.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
gi|449036071|gb|AGE71497.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius N8]
gi|449038345|gb|AGE73770.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius Ron12/I]
Length = 458
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 207/456 (45%), Gaps = 122/456 (26%)
Query: 5 LDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQ-------FRH--------- 48
L+L R +PE +++N K RF + VDK +E D KWRQ RH
Sbjct: 6 LELIR----NNPEVLKENLKRRFIDTSTVDKAVELDKKWRQTLQEVERLRHEHNLISSQI 61
Query: 49 -------KADNFNKFKNLCSKVIGEKMKAKEPVGDSS-----TLPGNHLHPSVPVSNNED 96
K++ NK K L K + +K K + + + +LP N +H SVP+ +E
Sbjct: 62 PKAPKEQKSELINKAKELL-KTLEDKEKELQKIEEERENLLLSLP-NLVHDSVPIGPDES 119
Query: 97 ENGIVRTKG---------------------DTEV--RKKYSHVDLITMIDGV-DSEAGAI 132
+ +R G D EV K H D++ + + D++
Sbjct: 120 YSVPIRFWGKFKVYKDDVNEFLKQTNGHKVDYEVINWKPVGHADMLENVLRLGDTKKAGE 179
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
VA R Y+L V L + L+ YA+ +GYT + P+ +R EV++ V L F + +
Sbjct: 180 VAASRFYYLFNDIVWLDLALLLYAIDTITSRGYTLVLPPYMLRGEVIKSVIDLDTFKDAI 239
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
YK+ G +D YLIAT+E I A++ +P+ LP++ +GVS FR+
Sbjct: 240 YKIEG---------------EDLYLIATAEHSIAALYYKEEIPKEELPLKLVGVSPAFRK 284
Query: 253 E------DLTK---------------------------------------SIAYRVVNIV 267
E DL + YRV+NI
Sbjct: 285 EAGAANKDLKGIFRVHQFHKVEQFIFSSPEDSWKYHEEMIENAEEIFRGLGLPYRVINIA 344
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
SG L AAKK DLE W P FRE+VSCSNCLD+Q+ R+ +RY + N K ++H
Sbjct: 345 SGDLGAPAAKKYDLEVWMPAQAKFREMVSCSNCLDWQAYRMRIRYVEK---NNKKGYLHT 401
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN+TA A+TR I AILE Q E G V +P LRK++
Sbjct: 402 LNSTAIASTRAITAILENFQKEDGVVEVPKVLRKYL 437
>gi|408404385|ref|YP_006862368.1| serine--tRNA ligase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364981|gb|AFU58711.1| serine--tRNA ligase [Candidatus Nitrososphaera gargensis Ga9.2]
Length = 426
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 186/410 (45%), Gaps = 95/410 (23%)
Query: 33 VDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEP--------------VGDSS 78
+D+++ D + R+ + + KN+ ++ I K KAK+ +GDS
Sbjct: 28 LDELVTIDRRRRELIVETQELRQKKNVLAEAIARKKKAKQDASSELAQMKEVSSYLGDSE 87
Query: 79 --------------TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITM 121
+ N LH SVP +E +N +VR G + + ++ HVD+
Sbjct: 88 EELVKTEGRFKELMMVVPNMLHESVPTGKDEKDNVVVRQNGSAK-KMNFAPKDHVDIAAA 146
Query: 122 IDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE 181
+D VD E A V+G R Y+LK V + LV +AL E Y + P+ +R+E M
Sbjct: 147 LDLVDVERAAKVSGARFYYLKNELVKMNQALVNFALDFLSEHSYILVQPPYMIRRESMSG 206
Query: 182 VAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 241
L F + +YKV G +D Y+I TSE I ++H D L LPI
Sbjct: 207 AVILGDFQDVIYKVEG---------------EDLYMIGTSEHAIASMHMDEILDGKKLPI 251
Query: 242 RYLGVSTCFRQE------DLTK-------------------------------------- 257
RY G S CFR+E D+
Sbjct: 252 RYAGYSPCFRKEAGAHGKDMKGIFRVHQFEKVEQFVYCRPEDSWKEHERMLALSEEFYNR 311
Query: 258 -SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK 316
I RV+ + SG +AK D+EAW G A+RE+VSCSNC+DYQ+RRL +R+
Sbjct: 312 LGIPNRVMLLCSGDTGKISAKTYDIEAWMAGQNAYREIVSCSNCVDYQARRLGIRF--RD 369
Query: 317 KMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
+ NE+ VH LN+T AT R + AILE +QT G V +PD L+K++ +
Sbjct: 370 RTNEETRLVHTLNSTLVATERTMVAILENYQTSNGTVEVPDALQKYMGGI 419
>gi|398784224|ref|ZP_10547502.1| seryl-tRNA ligase [Streptomyces auratus AGR0001]
gi|396995398|gb|EJJ06414.1| seryl-tRNA ligase [Streptomyces auratus AGR0001]
Length = 429
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 196/438 (44%), Gaps = 97/438 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++VELVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVELVDALLSADERRRSSSVRFDELRAEQKSLG 56
Query: 62 KVI---------------GE-----------KMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K+I GE + +AKE GN +HP VPV E
Sbjct: 57 KLIPKASGDEKAALLKKAGELSAAVKAADAAQDEAKEETQQLLLKLGNLVHPDVPVGGEE 116
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D ++ T G E + H+++ ++ +D E GA V+G R Y+L G L++
Sbjct: 117 DFT-VLETHGTIRDFTAEGFEPKDHLEIGELLGAIDVERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATAAGFTPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + A LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIVDAAKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVTPEDAQAEHQRLLDWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC ++Q+RRL VR + +K+ + LN T CA R I AI E
Sbjct: 341 PTQGKYRELTSASNCDEFQARRLSVRMRENVDGKQKVSPLATLNGTLCAVPRTIVAIFEN 400
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 401 HQQADGSVRVPEVLRPYL 418
>gi|15921761|ref|NP_377430.1| seryl-tRNA synthetase [Sulfolobus tokodaii str. 7]
gi|30173199|sp|Q970Y4.1|SYS_SULTO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|342306504|dbj|BAK54593.1| seryl-tRNA synthetase [Sulfolobus tokodaii str. 7]
Length = 453
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 204/446 (45%), Gaps = 116/446 (26%)
Query: 14 GDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS------------ 61
+P+K+++ K RF +V LVD+ +E D KWRQ + + N+ S
Sbjct: 11 NNPDKLKEYIKRRFIDVSLVDRAVELDKKWRQTLQEVEKLRHEHNVISSSIPKAKPEERQ 70
Query: 62 ----------KVIGEKMKAKEPVGDSS-----TLPGNHLHPSVPVSNNEDENGIVRTKGD 106
K + EK K + + + LP N + S P+ +E + +R G
Sbjct: 71 ELIKKAKELLKALEEKEKELDNIENERDNILMQLP-NIVDDSAPIGPDETYSVPIRFWGK 129
Query: 107 TEVRKK-----------------------YSHVDLITMIDGV-DSEAGAIVAGGRGYFLK 142
+V +K H D++ + + D++ A V+G R Y+L
Sbjct: 130 FKVYEKDEAEFLSQLKGNRVDYEIIHWKPVGHADMLENVLKLGDTKKAAEVSGARFYYLF 189
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
V L + L+ YA+ KGYT + P+ +R EV++ V L F + +YK+
Sbjct: 190 DDIVWLDIALLNYAIDTMTSKGYTLVLPPYMLRGEVIKSVIDLDTFKDAIYKI------- 242
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
E +D YLIAT+E PI A++ +P+ LP++Y+G+S FR+E
Sbjct: 243 --------ENEDLYLIATAEHPIAALYFKEEIPKEKLPLKYVGISPAFRKEAGAANKDLK 294
Query: 254 ---------------------------DLTKS---------IAYRVVNIVSGALNHAAAK 277
+L ++ + YRV+NI +G L AAK
Sbjct: 295 GIFRVHQFHKVEQFIFSSPEDSWKLHEELIRNAEEIFQGLGLPYRVINIATGDLGACAAK 354
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLE W P FRE+VSCSNCLD+Q+ R+ +RY + K +VH LN+TA A+TR
Sbjct: 355 KYDLEVWMPAQAKFREMVSCSNCLDWQAYRMRIRYVEK---GGKKGYVHTLNSTAIASTR 411
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
I AILE +Q E G V IP L+K++
Sbjct: 412 TITAILENYQREDGVVEIPKVLKKYL 437
>gi|329938706|ref|ZP_08288102.1| seryl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
gi|329302197|gb|EGG46089.1| seryl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
Length = 425
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 191/425 (44%), Gaps = 97/425 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIEND-------LKWRQFR----------------HKAD 51
DP++VR +Q+ R ++V LVD ++ D L++ + R KA+
Sbjct: 10 DPDRVRASQRARGEDVGLVDALLSADERRRSSGLRFDELRSEQKSLGKLIPKASPEEKAE 69
Query: 52 NFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNED-----ENGIVRT 103
K + L S V + E ++ L GN +HP VPV ED +G VR
Sbjct: 70 LLRKAEQLKSDVKAADAEQHEAEDETRRLLLQLGNLVHPDVPVGGEEDFVVLETHGTVRD 129
Query: 104 KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
G K H++L + +D E A V+G R Y+L G L++ LV A+++ E
Sbjct: 130 FGAEGFEPK-DHLELGQALGAMDVERAAKVSGSRFYYLTGVGALLELALVNAAIAQATEA 188
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
G+TP+ TP +R + M+ L Q E +Y + E DD YL+ TSE
Sbjct: 189 GFTPMLTPALVRPQAMEGTGFLGQAAENVYHL---------------EKDDLYLVGTSEV 233
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------------------- 258
P+ A H D + LP+RY G S CFR+E T
Sbjct: 234 PLAAYHMDEIIDAEKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFTFVDPSE 293
Query: 259 --------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
+ ++V+++ +G L +A++K D EAW P G +REL S S
Sbjct: 294 AENEHRRLLDWEKQWLTSLELPFQVIDVATGDLGASASRKFDCEAWIPTQGKYRELTSAS 353
Query: 299 NCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDC 357
NC +Q+RRL VR K K++ + LN T CA R I A+LE HQ G VR+P+
Sbjct: 354 NCDGFQARRLSVRMRDGK----KVQPLSTLNGTLCAVPRTIVALLENHQLADGSVRVPEV 409
Query: 358 LRKFV 362
LR ++
Sbjct: 410 LRPYL 414
>gi|161529019|ref|YP_001582845.1| seryl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
gi|238686942|sp|A9A4V3.1|SYS_NITMS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|160340320|gb|ABX13407.1| seryl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
Length = 421
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 196/426 (46%), Gaps = 100/426 (23%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPVG 75
P+ +R K R + +L D +IE+D K R+F K D F K +N I +K KA E
Sbjct: 11 PQVIRDMLKARAVDFDL-DGLIESDQKRREFIIKTDEFKKRRNEIGNEIAQKKKAGE--- 66
Query: 76 DSSTLPG-------------------------------NHLHPSVPVSNNEDENGIVRTK 104
D+ST+ N +H SVPV ++ N +R
Sbjct: 67 DTSTILDEMKNVSAELAKLESQQEEIESKYAKLAFTVPNLVHESVPVGPDDTANKEMRKW 126
Query: 105 GDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIE 162
G+ K H+D+ +D VD E A VAG R Y+LK V L L+ +AL E
Sbjct: 127 GEIPQFDFKINDHIDMSENLDLVDLERAAKVAGARFYYLKNDLVRLNQSLIHFALDFLAE 186
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSE 222
K Y+ + P+ + + M+ F+E +YKV E +D Y+I TSE
Sbjct: 187 KEYSLVQPPYMINRSSMEGAVIADDFEEVIYKV---------------EEEDLYMIGTSE 231
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------------------- 253
+ A+H + LPIRY GVS CFR+E
Sbjct: 232 HAMAAMHSKEIIEGKDLPIRYAGVSPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVYARPE 291
Query: 254 DLTKS----------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
D K I +RV+ + +G + +AK D+EAW G ++RE+VSC
Sbjct: 292 DSWKEHEKMLAVAEEFYQKLEIPHRVMLLSTGDMGKISAKTYDIEAWMAGQNSYREIVSC 351
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPD 356
SNCLDYQ+RRL +R+ K NE +++H LN+T ATTRV+ +I+E QT+ G ++IP
Sbjct: 352 SNCLDYQARRLKIRF--RDKTNEDTQYIHTLNSTLVATTRVLVSIMENFQTKDGHIKIPQ 409
Query: 357 CLRKFV 362
L+ ++
Sbjct: 410 VLQSYM 415
>gi|124485533|ref|YP_001030149.1| seryl-tRNA synthetase [Methanocorpusculum labreanum Z]
gi|166222742|sp|A2SRC6.1|SYS_METLZ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|124363074|gb|ABN06882.1| seryl-tRNA synthetase [Methanocorpusculum labreanum Z]
Length = 425
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 187/409 (45%), Gaps = 98/409 (23%)
Query: 33 VDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGE-KMKAKEPV---GDSSTLPG------ 82
VD V+E D +R+ K + +N +K I K + K+P ++ LPG
Sbjct: 30 VDTVLEQDKLFRELTVKNNELRARRNQIAKEINAYKKEGKDPAPLFAEAKALPGLIKDND 89
Query: 83 ------------------NHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLI 119
N LH SVP ++ EN +V+ G D E++ +H +L
Sbjct: 90 DIMEKATEQVRYYLMRLPNILHESVPYGKDDTENVVVKKVGTPRSLDFELK---NHGELA 146
Query: 120 TMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVM 179
D E +G YFLKG L + L ++AL I KGYTP+ P+ M ++
Sbjct: 147 AANGWADFERATKTSGAGFYFLKGNLALLDMALQRFALDTIIAKGYTPIIPPYMMNRKSY 206
Query: 180 QEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASL 239
+EV L F++ +YK+ E DD YLIAT+E P+ A+++D E L
Sbjct: 207 EEVTDLGDFEKVMYKI---------------EDDDAYLIATAEHPMAAMYQDEIFEEKDL 251
Query: 240 PIRYLGVSTCFRQE---------------DLTK--------------------------- 257
P++ +G+S CFR+E TK
Sbjct: 252 PLKMVGISPCFRREIGAHGLDSRGLFRVHQFTKIEQFIYCMPEKSWEMHEELLANAEEIF 311
Query: 258 ---SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ 314
+ YRVVNI +G + AAKK D+EAW P +RE+VSCSNC YQS RL +R
Sbjct: 312 TKLGLPYRVVNICTGDIGTVAAKKYDMEAWMPRDNEYREVVSCSNCTAYQSVRLNIRVRD 371
Query: 315 TKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
K +++H LN+TA AT+R + ILE +QTE G V IP LR ++
Sbjct: 372 AHDFESK-QWLHTLNSTAVATSRALRCILENYQTEDGKVEIPKVLRPYM 419
>gi|407465514|ref|YP_006776396.1| seryl-tRNA synthetase [Candidatus Nitrosopumilus sp. AR2]
gi|407048702|gb|AFS83454.1| seryl-tRNA synthetase [Candidatus Nitrosopumilus sp. AR2]
Length = 421
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 137/427 (32%), Positives = 195/427 (45%), Gaps = 102/427 (23%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPVG 75
P+ +R K R + L D +IE+D K R+F K D K KN + I +K KA E
Sbjct: 11 PQIIRDMLKARSVDFNL-DGLIESDQKRREFIIKTDELRKKKNQVALEISQKKKAGE--- 66
Query: 76 DSS--------------------------------TLPGNHLHPSVPVSNNEDENGIVRT 103
D+S T+P N +H SVP+ +E N VR
Sbjct: 67 DASLILSEMKNVSAELAKLESEQENIENTYSRLALTIP-NLVHDSVPIGTDESANQEVRK 125
Query: 104 KGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWI 161
G+ K H+D+ +D VD E A VAG R Y+LK V L L+ Y L
Sbjct: 126 WGNVPNFDFKINDHIDISENLDLVDLERAAKVAGARFYYLKNDLVRLNQSLIHYGLDFLA 185
Query: 162 EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
+K Y+ + P+ + +E M+ F+E +YKV E +D Y+I TS
Sbjct: 186 KKEYSLVQPPYMINRESMEGAVIADDFEEVIYKV---------------EDEDLYMIGTS 230
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------------- 253
E + A+ L LP+RY GVS CFR+E
Sbjct: 231 EHAMAAMRSKEILEGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVFSRP 290
Query: 254 -DLTKS----------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVS 296
D K I +RV+ + +G + +AK D+EAW G A+RE+VS
Sbjct: 291 EDSWKEHERMLSVAEEFYQNLEIPHRVMLLSTGDMGKVSAKTYDIEAWMAGQNAYREIVS 350
Query: 297 CSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIP 355
CSNCLDYQ+RRL +R+ K NE ++VH LN+T ATTR++ +I+E QT+ G +RIP
Sbjct: 351 CSNCLDYQARRLKIRF--RDKTNEDTQYVHTLNSTLIATTRILVSIMENFQTKDGHIRIP 408
Query: 356 DCLRKFV 362
L+ ++
Sbjct: 409 SVLQNYM 415
>gi|48478304|ref|YP_024010.1| seryl-tRNA synthetase [Picrophilus torridus DSM 9790]
gi|67461767|sp|Q6KZN5.1|SYS_PICTO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|48430952|gb|AAT43817.1| seryl-tRNA synthetase [Picrophilus torridus DSM 9790]
Length = 444
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 206/466 (44%), Gaps = 122/466 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D+ L R + E K+ +DR + ++D+ E D +W++ + +N KN +
Sbjct: 1 MIDIKLLRL----NSEIFYKSCRDRGFDTRILDEFFELDNEWKENLKQLNNIKHDKNSIT 56
Query: 62 KVIGEKMKAKEPVGDSST----------------------------LPGNHLHPSVPVSN 93
I ++K+ + + D L N L VP
Sbjct: 57 MEISRRIKSGDDINDLKLKVESLNIDIQRLEGRQNEIDVKRNEILRLIPNLLADDVPRCF 116
Query: 94 NEDENGIVRTKGDTEVRK---KY------------------SHVDLITMIDGVDSEAGAI 132
++ N +VR G V KY SHVDLI+ ++ D E
Sbjct: 117 GDENNRLVRYYGRARVFSDDVKYFIENSGSGDYEEIDYRPKSHVDLISELNLADIERAGK 176
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
+AG R YFLK L++ L+ YA+ ++GYT L PF + + M + F + L
Sbjct: 177 IAGARFYFLKNRLFKLELALINYAVDFLSQRGYTVLEPPFMINYKSMSGATDIETFKDTL 236
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
YK+ G DD YLIAT+E PI ++ +D L E LPIR GVS CFR+
Sbjct: 237 YKIEG---------------DDLYLIATAEHPIASMLQDEILMEDELPIRVSGVSPCFRR 281
Query: 253 E-------------------------------------------DLTKS--IAYRVVNIV 267
E D+ KS I YRVVN+
Sbjct: 282 EAGAHGKDTKGIFRVHQFNKIEQFVFCKPEDSWDFFDELVRNSEDIYKSLKIPYRVVNVC 341
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
SG L + AAKK D+EAWFP G FRE+VS SN DYQ+R L ++Y +++ N FVH
Sbjct: 342 SGELGNLAAKKYDIEAWFPAQGKFREIVSASNDTDYQARSLNIKY-RSRDGN---RFVHT 397
Query: 328 LNATACATTRVICAILETHQTETG--VRIPDCLRKFVPAVYVNEAG 371
LN+TA AT R++ AI+E Q G ++IP+ L +P +E G
Sbjct: 398 LNSTAIATERILVAIMENFQDRNGKVIKIPEVL---IPYTGFSEIG 440
>gi|297193371|ref|ZP_06910769.1| seryl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC 25486]
gi|197718310|gb|EDY62218.1| seryl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC 25486]
Length = 425
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 196/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIEND-------LKWRQFR------- 47
++DL L R DP++VR +Q+ R ++V LVD ++ D L++ + R
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVGLVDALLSADERRRSSGLRFDELRSEQKSLG 56
Query: 48 ---------HKADNFNKFKNLCSKVIG---EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
+A+ K + L S V E+ A+E GN +H VPV E
Sbjct: 57 KLIPKATPDERAELLKKAEQLKSDVKAAEAEQNDAEEETRRLLLQVGNLVHEDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R G K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFGAEGFTPK-DHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+ P+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFIPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVAPEDAEAEHKRLLDWEKQWLTALELPFQVIDVATGDLGSSASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR + K K++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLSVRMREGK----KVQPLATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQLADGSVRVPEVLRPYL 414
>gi|386874608|ref|ZP_10116843.1| serine--tRNA ligase [Candidatus Nitrosopumilus salaria BD31]
gi|386807581|gb|EIJ66965.1| serine--tRNA ligase [Candidatus Nitrosopumilus salaria BD31]
Length = 421
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 195/424 (45%), Gaps = 94/424 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPV 74
+P+ +R K R + +L D++IE+D K R+ K D K KN + I +K KA E
Sbjct: 10 NPQIIRDMLKARNVDFDL-DRLIESDQKRRELIIKTDELRKKKNQLAIDISQKKKAGEDA 68
Query: 75 -----------GDSSTLPG-----------------NHLHPSVPVSNNEDENGIVRTKGD 106
GD + L N + SVP+ +E+ N +R G
Sbjct: 69 SSILSDMKNISGDLTKLESEQQIIENTYSRLALTIPNLVDESVPIGVDENANKEIRKWGT 128
Query: 107 TEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKG 164
K H+D+ +D VD E A VAG R Y+LK V L L+ Y L +K
Sbjct: 129 IPSFDFKINDHIDISENLDLVDLERAAKVAGARFYYLKNDLVRLNQSLIHYGLDFLAKKE 188
Query: 165 YTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQP 224
Y+ + P+ + +E M+ F+E +YK+ DE D Y+I TSE
Sbjct: 189 YSLIQPPYMINRESMEGAVIADDFEEVIYKI-------------DDE--DLYMIGTSEHA 233
Query: 225 ICAVHRDSWLPEASLPIRYLGVSTCFRQE-----------------------------DL 255
+ A+H + LP+RY G+S CFR+E D
Sbjct: 234 MAAMHSKEIIEGKDLPLRYAGISPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVFSRPEDS 293
Query: 256 TKS----------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSN 299
K I YR++ + +G + +AK D+EAW G A+RE+VSCSN
Sbjct: 294 RKEHEKMLAASEEFYQSLEIPYRIMLLSTGDMGKVSAKTYDIEAWMAGQNAYREIVSCSN 353
Query: 300 CLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCL 358
CLDYQ+RRL +RY K NE +++H LN+T ATTR++ +I+E QT+ G ++IP L
Sbjct: 354 CLDYQARRLKIRY--RDKTNEDTQYLHTLNSTLIATTRILVSIMENFQTKDGHIKIPHVL 411
Query: 359 RKFV 362
+ ++
Sbjct: 412 QSYM 415
>gi|254384853|ref|ZP_05000190.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces sp. Mg1]
gi|194343735|gb|EDX24701.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces sp. Mg1]
Length = 425
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 188/438 (42%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V+LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVDLVDALLSADERRRSSGMRFDELRNEQKSLG 56
Query: 62 KVI--------------------------GEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K+I E+ +A E GN +H VPV E
Sbjct: 57 KLIPKASPEERAELLKKAEQLKGDVKAAEAEQNEADEAAKRLLLQLGNIVHTDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFTVLETHGTIRDFAAEGFEPK-DHLELGESLGAIDVERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+ P+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFIPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVAPEEAEAEHQRLLEWEKQWLTSLELPFQVIDVATGDLGSSASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL +RY KK + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLSIRYRDGKKTAP----LSTLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P LR ++
Sbjct: 397 HQQADGSVRVPAALRPYL 414
>gi|119719325|ref|YP_919820.1| seryl-tRNA synthetase [Thermofilum pendens Hrk 5]
gi|119524445|gb|ABL77817.1| seryl-tRNA synthetase [Thermofilum pendens Hrk 5]
Length = 452
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 199/446 (44%), Gaps = 115/446 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF-NKFKNLCSKV---IGEK--- 67
+PEK+ +N K RF + LV+ I+ D++WR + + D ++ + +KV G++
Sbjct: 11 NPEKLIENMKARFMDPSLVENAIKLDVEWRAKKKEYDELKHRLNEVSAKVRSSTGQEREK 70
Query: 68 --MKAKEPVGDSST------------------LPGNHLHPSVPVSNNEDENGIVRTKGDT 107
++A+E S LP N +H SVP+ +E N VR G
Sbjct: 71 LILEARELSSKVSLLEKELAELEAKRELALRRLP-NVIHESVPIGPDETFNKPVRYWGRP 129
Query: 108 EVRKKY-------------------------SHVDLITMIDGVDSEAGAIVAGGRGYFLK 142
+V +++ H + + ++ A VAG R Y++
Sbjct: 130 KVFREHLEGFLKETKEKGFVVDYEVLDWKPLGHAEFLESKGLTNTLKAAEVAGARFYYMF 189
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
V L + L YAL KG+T L P +R+E+++ V F + +YK+ G
Sbjct: 190 NDLVWLAIALELYALEYLAGKGFTILLPPLMLRREILEGVVSFDDFKDMIYKIDG----- 244
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
+D YLI T+E PI A+H L E LP+ Y GVS FR+E
Sbjct: 245 ----------EDLYLIGTAEHPIAALHAGEVLAEKELPLLYAGVSESFRKEAGAHGKDTK 294
Query: 254 ---------------------------DLTKS---------IAYRVVNIVSGALNHAAAK 277
L ++ I YR+VNI SG L AAK
Sbjct: 295 GIFRVHHFEKVEQFVFSHPDESWEWHEKLIRNAEELWQGLEIPYRIVNIASGDLGVVAAK 354
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLEAW P G +RE+VSCSNC D+QS RL +RY + + K +VH LN+TA A R
Sbjct: 355 KYDLEAWMPAQGKYREMVSCSNCTDWQSYRLNIRYAEVRGGPSK-GYVHTLNSTALAIQR 413
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
I AI+E HQT G V++P L K++
Sbjct: 414 TITAIVENHQTPDGYVKVPKALHKYL 439
>gi|345849283|ref|ZP_08802296.1| seryl-tRNA synthetase [Streptomyces zinciresistens K42]
gi|345639189|gb|EGX60683.1| seryl-tRNA synthetase [Streptomyces zinciresistens K42]
Length = 425
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 196/440 (44%), Gaps = 105/440 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFN----KFK 57
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKQLG 56
Query: 58 NLCSKVIGEKM-----KAKEPVGDSSTLP-----------------GNHLHPSVPVSNNE 95
L K G++ KA D GN +HP VPV E
Sbjct: 57 KLIPKAAGDEKAELLKKASRLAADVKAADAERDAADVETQELLVRLGNLVHPDVPVGGEE 116
Query: 96 DENGIVRTKGDTEVR-------KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
D V + E+R + H++L T++ +D E GA V+G R YFL G L
Sbjct: 117 D---FVTLETHGEIRDFAAEGFEPRDHLELGTLLGAIDVERGAKVSGSRFYFLTGVGALL 173
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
++ LV A+++ G+TP+ TP +R + M L Q +++Y +
Sbjct: 174 ELALVNAAMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHL------------- 220
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED-------------- 254
+ DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 221 --DKDDLYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSPCFRREAGSHGKDTRGIFRVH 278
Query: 255 ------------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEA 283
LT + YRV+++ SG L +A++K D EA
Sbjct: 279 QFDKVEMFSYVASEDSRAEHQRLLEWEKQWLTSLELPYRVIDVASGDLGASASRKFDCEA 338
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
W P G +REL S S+C ++QSRRL +R K +++ + LN T CA R I AIL
Sbjct: 339 WIPTQGKYRELTSTSDCTEFQSRRLSIRVRDGK----QVKPLATLNGTLCAVPRTIVAIL 394
Query: 344 ETHQTETG-VRIPDCLRKFV 362
E HQ G VR+P+ LR ++
Sbjct: 395 ENHQQADGSVRVPEVLRPYL 414
>gi|302544049|ref|ZP_07296391.1| serine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
gi|302461667|gb|EFL24760.1| serine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
Length = 425
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 198/438 (45%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V +VD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVGIVDALLAADERRRSSSVRFDELRSEQKSLG 56
Query: 62 KVI-----GEKMKAKEPVGDSSTLP---------------------GNHLHPSVPVSNNE 95
K++ EK + + G+ S GN +HP VPV E
Sbjct: 57 KLVPKASGDEKAELLKKAGELSAAVKAADAEQDAAAEETQNLLRQLGNLVHPDVPV-GGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ ++ T G E H++L ++ +D+E GA V+G R Y+L G L++
Sbjct: 116 DDFTVLETVGTPRDFAAEGIAPKDHLELGELLGAIDTERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP ++ + M+ L Q E++Y +
Sbjct: 176 ALVNAAMAQATAAGFTPVLTPALVKPKAMEGTGFLGQAAEDVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
+ DD YL+ TSE P+ A H D L LP RY G S+CFR+E
Sbjct: 221 DKDDLYLVGTSEVPLAAYHMDEILESEQLPRRYAGFSSCFRREAGSYGKDTRGIFRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
LT + +RVV++ SG L +A +K D EAW
Sbjct: 281 DKVEMFVYTTPEEAEAEHQRLLEWEKQWLTSLELPFRVVDLASGDLGSSATRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SN ++QSRRL +R + KK+ + LN T CA TR I AILE
Sbjct: 341 PTQGKYRELTSTSNTTEFQSRRLSIRMREGKKVRP----LATLNGTLCAVTRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR F+
Sbjct: 397 HQQADGSVRVPEVLRPFL 414
>gi|397644004|gb|EJK76202.1| hypothetical protein THAOC_02052, partial [Thalassiosira oceanica]
Length = 372
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 149/284 (52%), Gaps = 41/284 (14%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKAD-NFNKFKNL 59
M +D++ RT KGG+P+ R K RFK+ +VD+VI D +WR R + D +
Sbjct: 39 MPIDINELRTYKGGNPDAYRTYMKQRFKDPSIVDQVIAKDEEWRALRKQIDAERTTVGKI 98
Query: 60 CSKVIGEKMKAKEPVGDSST---------------LP-------------GNHLHPSVPV 91
VI K KAKEP + LP GN + P VP+
Sbjct: 99 QKDVIAPKKKAKEPCDEEVAQVKAMKANIAALEKELPVKAAERDVLLNQVGNIVDPEVPI 158
Query: 92 S--NNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+ ++EDE + T T K +H DL+ IDG + G VAG RGYFLK V L
Sbjct: 159 ASGDDEDEANLSYTLPST---KPLTHDDLLWRIDGYEPMRGQQVAGHRGYFLKNAGVLLN 215
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ Y ++ ++GY L P+FM K+VM +AQL FDE+LYKV GK + S
Sbjct: 216 QALINYGIAFLRKRGYQVLQPPYFMNKDVMAGIAQLDDFDEQLYKVSGKTDDPEGST--- 272
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+KYLIATSEQPIC H++ W+ + +LP RY G+STCFR+E
Sbjct: 273 ----EKYLIATSEQPICGYHKNEWIDDKALPFRYAGISTCFRKE 312
>gi|408679452|ref|YP_006879279.1| Seryl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
gi|328883781|emb|CCA57020.1| Seryl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
Length = 429
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 189/438 (43%), Gaps = 97/438 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKALG 56
Query: 62 KVI--------------------------GEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K+I E+ +A E GN +H VPV E
Sbjct: 57 KLIPKATPEERAELLQKAEQLKTDVKAAEAEQNEADETARKLLLQLGNIVHTDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFAAEGFEPK-DHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+ P+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFIPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVAPEDAEAEHKRLLEWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR + + ++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDSFQARRLSVRMRDDQGGKKVVQPLATLNGTLCAVPRTIVAILEN 400
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 401 HQLADGSVRVPEMLRPYL 418
>gi|126178761|ref|YP_001046726.1| seryl-tRNA synthetase [Methanoculleus marisnigri JR1]
gi|166222743|sp|A3CTP4.1|SYS_METMJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|125861555|gb|ABN56744.1| seryl-tRNA synthetase [Methanoculleus marisnigri JR1]
Length = 425
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 193/425 (45%), Gaps = 94/425 (22%)
Query: 16 PEKVRKNQKDRFKNVEL--VDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKA--- 70
PE VR + R +L VD+V+E D + R+ + +N+ S+ I + KA
Sbjct: 11 PEIVRADLTKRGDTEKLAWVDEVLEMDRRARELTVAIGDLRNRRNVISREISQARKAGND 70
Query: 71 -KEPVGDSSTLP------------------------GNHLHPSVPVSNNEDENGIVRTKG 105
E + +++ LP N LH SVPV ++ EN +R G
Sbjct: 71 ITELLAEAAGLPERIKEVETERETLTEAVRYRLMRLPNILHESVPVGKDDSENVEIRRWG 130
Query: 106 DTEVRK--KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
+ E+ +H L D E A +AG YFLKG L + L ++A+ +E
Sbjct: 131 EPEIPAFDLENHGALAVEHGWADFERAAKIAGSGFYFLKGRLALLDMALQRFAMDILVEH 190
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
GYTP+ P+ M + + V LA F+ +Y++ G +D+YLIATSE
Sbjct: 191 GYTPIIPPYMMNRAAYEGVTDLADFENVMYRIDG---------------EDEYLIATSEH 235
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------------------ 253
P+ A++ D E LP+R G+S CFR+E
Sbjct: 236 PMAAMYCDEIFEEKDLPLRLAGLSPCFRREIGAHGLDTKGLFRVHQFHKVEQFIYATPEQ 295
Query: 254 --DLTKSIA-------------YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
DL + + YR+V+I +G + AAKK DLE W P +RE VSCS
Sbjct: 296 SWDLHEELMANAEEVFQRLGLPYRIVSICTGDIGTVAAKKYDLEVWMPREERYREAVSCS 355
Query: 299 NCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDC 357
NC YQ+ RL ++ + EK +VH LN+TA AT+R I AILE +Q E G V IP
Sbjct: 356 NCTAYQAVRLNIKVRNPTEFTEK-RYVHTLNSTAIATSRAIRAILENNQNEDGSVTIPKA 414
Query: 358 LRKFV 362
LR ++
Sbjct: 415 LRPYL 419
>gi|365864768|ref|ZP_09404447.1| seryl-tRNA synthetase [Streptomyces sp. W007]
gi|364005808|gb|EHM26869.1| seryl-tRNA synthetase [Streptomyces sp. W007]
Length = 425
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 194/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V+LVD ++ D R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVDLVDALLSADELRRSSGVRFDELRAEQRSLG 56
Query: 62 KVI--------------GEKMKAKEPVGDSSTLP------------GNHLHPSVPVSNNE 95
K+I E++KA D++ GN +H VPV E
Sbjct: 57 KLIPKATPEERAELLKKAEQLKANVKAADAAQDEADADAKRLLLQLGNIVHEDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R G K H+++ + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFGAEGFEPK-DHLEIGEALGAIDMERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+ P+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFIPMLTPALVRPRAMEGTGFLGQASENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDAGKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVDPADAEAEHRRLLDWEKQWLTALELPFQVIDVATGDLGASASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR + K K++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLSVRMREGK----KVQPLATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQLPDGSVRVPEVLRPYL 414
>gi|16081587|ref|NP_393946.1| seryl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
gi|13878795|sp|Q9HKX5.1|SYS_THEAC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|10639638|emb|CAC11610.1| probable seryl-tRNA synthetase [Thermoplasma acidophilum]
Length = 441
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 168/356 (47%), Gaps = 87/356 (24%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEV----------------------RKKYSHV 116
T+P N +H SVPV ++ N +VR G +V + SHV
Sbjct: 103 TIP-NLVHESVPVCFGDENNQLVRYVGHAKVFRDDIEEFKKNSGNSQDYEVLDERPKSHV 161
Query: 117 DLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 176
DL ++ +D E+ A ++G R YF+K + L++ L YA+ ++G++ + P+ +
Sbjct: 162 DLGLDLNVIDLESAARISGSRFYFIKNRLLKLEMALENYAVDFLSQRGFSIVEPPYMLNL 221
Query: 177 EVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPE 236
E M+ L F + LYK+ G +D YLIATSE I A+ + +L E
Sbjct: 222 ESMRGATDLETFKDTLYKIEG---------------EDLYLIATSEHSIAAMLSNQFLEE 266
Query: 237 ASLPIRYLGVSTCFRQE--------------------------------DLTK------- 257
LP+R G+S CFR+E D +
Sbjct: 267 KDLPLRVAGISACFRREAGAHGKDTKGIFRVHQFNKIEQFVFCKPEDSWDFLEEILGNAE 326
Query: 258 ------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVR 311
I YRVVN+ SG L AAKK D+EAWFP G FRE+VS SN DYQ+R L ++
Sbjct: 327 AIYRSLGIPYRVVNVCSGELGRLAAKKYDIEAWFPAQGKFREIVSASNDTDYQARSLNIK 386
Query: 312 YGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 367
Y + +E FVH LN+TA ATTR++ AI+E Q +RIPD L + Y+
Sbjct: 387 Y----RTSEGNRFVHTLNSTAIATTRILVAIMENFQEGDRIRIPDVLVPYTGFQYI 438
>gi|389862013|ref|YP_006364253.1| seryl-tRNA synthetase [Modestobacter marinus]
gi|388484216|emb|CCH85748.1| Seryl-tRNA synthetase [Modestobacter marinus]
Length = 430
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 193/438 (44%), Gaps = 103/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR +Q+ R + LVD ++ D + R AD+ + S
Sbjct: 1 MIDLRLVRE----NPDLVRASQRARGADESLVDALLAADAERRAAVKAADDLRGEQKAAS 56
Query: 62 KVIGEKMKAKEPV--------------------GDSSTLPGNHL------HPSVPVSNNE 95
+ + K + P + L HL HP VP E
Sbjct: 57 QAVRGASKEERPAVLEKAKALAAAVKEAEEAERTADAALHALHLRIPNVVHPDVP-PGGE 115
Query: 96 DENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +RT G D EV+ H+ + + +D E GA V+G R YFL GP L+
Sbjct: 116 DDAVTLRTVGEVPTYDFEVK---DHLQIGEALGAIDMERGAKVSGARFYFLTGPGALLEF 172
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L Q A+S+ + G+TP+ P ++ E M+ L + DEE+Y++
Sbjct: 173 ALAQLAVSRAVAAGFTPVVAPALVKPEAMEGTGFLGEHDEEVYRI--------------- 217
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDL-----TKSI------ 259
E DD YL+ TSE + +H L ++ P RY G S+CFR+E T+ I
Sbjct: 218 ERDDLYLVGTSEVALAGMHAREVLDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHWF 277
Query: 260 ----------------------------------AYRVVNIVSGALNHAAAKKLDLEAWF 285
YRVV+I +G L +AA+K D+EAWF
Sbjct: 278 DKVEMFSFCAPDEAEAEHRRLLQWEEEFLQLLELPYRVVDIAAGDLGTSAARKFDIEAWF 337
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S S+C +QSRRL +R ++ + K + V LN T CA R I +LE
Sbjct: 338 PSQGTYRELTSTSDCTTFQSRRLAIR---SRDADGKPQPVATLNGTLCAIARTIACLLEV 394
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G V +P LR ++
Sbjct: 395 HQQADGSVHVPAALRPWL 412
>gi|408825617|ref|ZP_11210507.1| seryl-tRNA ligase [Streptomyces somaliensis DSM 40738]
Length = 425
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 193/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V+LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVDLVDALLSADERRRSSGVRFDELRSEQKSLG 56
Query: 62 KVI--------------GEKMKAKEPVGDSSTLP------------GNHLHPSVPVSNNE 95
K+I E++KA D+ GN +HP VPV E
Sbjct: 57 KLIPKASPEERAELLKRAEQLKADVKAADAEQHEAEEEARHLLLRLGNLVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFAAEGFEPK-DHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+ P+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFVPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D L LP+RY G S C+R+E T
Sbjct: 221 EKDDFYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSPCYRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ SG L +A++K D EAW
Sbjct: 281 DKVEMFCYVAPEDAEAEHRRLLEWEKQWLTALELPFQVIDVASGDLGASASRKYDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR + +++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLSVRM----RDGNRVQPLATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQLADGSVRVPEVLRPYL 414
>gi|408530802|emb|CCK28976.1| Seryl-tRNA synthetase 1 [Streptomyces davawensis JCM 4913]
Length = 412
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 185/421 (43%), Gaps = 97/421 (23%)
Query: 19 VRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI-------------- 64
+R +Q+ R ++V LVD ++ D + R + D + K+I
Sbjct: 1 MRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSLGKLIPKATPEERAELLQR 60
Query: 65 GEKMK-------AKEPVGDSST-----LPGNHLHPSVPVSNNED-----ENGIVRTKGDT 107
E++K A + D T GN +HP VPV ED +G +R G
Sbjct: 61 AEQLKTDVKAAEAAQNEADDETKRLVLQLGNLVHPDVPVGGEEDFVVLETHGTIRDFGAE 120
Query: 108 EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTP 167
K H++L + +D E GA V+G R Y+L G L++ LV A+++ E G+TP
Sbjct: 121 GFEPK-DHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELALVNAAIAQATEAGFTP 179
Query: 168 LYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICA 227
+ TP +R M+ L Q E +Y + E DD YL+ TSE P+ A
Sbjct: 180 MLTPALVRPRAMEGTGFLGQAAENVYHL---------------EKDDYYLVGTSEVPLAA 224
Query: 228 VHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------------------------- 258
H D L LP+RY G S CFR+E T
Sbjct: 225 YHMDEILDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAENE 284
Query: 259 ----------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLD 302
+ ++V+++ SG L +A++K D EAW P G +REL S SNC
Sbjct: 285 HKRLLEWEKQWLTGLELPFQVIDVASGDLGASASRKFDCEAWIPTQGKYRELTSASNCDG 344
Query: 303 YQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
+Q+RRL VR K K++ + LN T CA R I AILE HQ G VR+P+ LR +
Sbjct: 345 FQARRLSVRMRDGK----KVQPLATLNGTLCAVPRTIVAILENHQLADGSVRVPEVLRPY 400
Query: 362 V 362
+
Sbjct: 401 L 401
>gi|411003781|ref|ZP_11380110.1| seryl-tRNA ligase [Streptomyces globisporus C-1027]
Length = 425
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 191/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V+LVD ++ D R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVDLVDALLSADELRRSSGVRFDELRNEQKSLG 56
Query: 62 KVI--------GEKMKAKEPVGDSSTLP------------------GNHLHPSVPVSNNE 95
K+I E +K E + GN +H VPV E
Sbjct: 57 KLIPKATPEERTELLKKAEQLKADVKAADAAQDEADADAKRLLLQLGNIVHEDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R G K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFGAEGFEPK-DHLELGEALGAIDMERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+TP+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFTPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVDPADAEAEHRRLLEWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR K K++ + LN T CA R I A+LE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLATLNGTLCAVPRTIVALLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQLPDGSVRVPEVLRPYL 414
>gi|357391001|ref|YP_004905842.1| putative seryl-tRNA synthetase [Kitasatospora setae KM-6054]
gi|311897478|dbj|BAJ29886.1| putative seryl-tRNA synthetase [Kitasatospora setae KM-6054]
Length = 426
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 194/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR-------QFRHKADNFN 54
++DL L R DPE+VR +Q+ R ++V+LVD ++ D + R + R +
Sbjct: 1 MIDLRLLRD----DPERVRSSQRSRGEDVDLVDALLSADERRRASGTRFDELRAEQKQLG 56
Query: 55 KF----------------KNLCSKVIGE---KMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K K L ++V + +AKE N + P+ PV E
Sbjct: 57 KLVAAAKGEEKAALLARTKELAAEVKAADTAQGEAKEEAERLQRALANLIDPAAPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D E G R E + HV+L ++ +D+E GA VAG R Y+L GP L++
Sbjct: 117 DFVTLEEVGTPRDFA-AEGFEPRDHVELGRLLGAIDTERGAKVAGARSYYLTGPGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP +R M L Q E +Y +
Sbjct: 176 ALVNMAMAQAGAAGFTPMITPALVRPAAMDGTGFLGQAAENVYYLAD------------- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
DD+YL+ TSE P+ A H D L LP+RY G S+CFR+E T
Sbjct: 223 --DDRYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSSCFRREAGTYGKDTRGIIRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ YRV+++ SG L +AA+K D+EAW
Sbjct: 281 EKVEMFVFTTPEDAEAEHRRLLQWEKDFLNALELPYRVIDVASGDLGSSAARKFDIEAWV 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +RE+ S SN +YQ+RRL +R + + + + LN T A RVI A+LE
Sbjct: 341 PTQGRYREVTSTSNTTEYQARRLAIRM----RDADGVRPLATLNGTLVAVPRVIVALLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G V +P+ LR F+
Sbjct: 397 HQLPDGSVALPEALRPFL 414
>gi|302552608|ref|ZP_07304950.1| seryl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
gi|302470226|gb|EFL33319.1| seryl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
Length = 425
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 196/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIEND-------LKWRQFR------- 47
++DL L R DP++VR +Q+ R ++V LVD ++ D +++ + R
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKALG 56
Query: 48 ---------HKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ K L ++V + ++ L GN +HP VPV E
Sbjct: 57 KLIPKASGDEKAELLKKASRLAAEVKAADAERDAAATETQELLQRLGNLVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R G K H++L ++ +D E GA V+G R YFL G L++
Sbjct: 117 DFVTLETHGTIRDFGAEGFEPK-DHLELGQILGAIDVERGAKVSGSRFYFLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP +R + M L Q +++Y +
Sbjct: 176 ALVNAAMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHLAD------------- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 223 --DDLYLVGTSEVPLAAYHMDEILDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
LT + +RV+++ S L +AA+K D EAW
Sbjct: 281 DKVEMFSYVAPEDSQAEHQRLLEWEKQWLTSLELPFRVIDVASADLGSSAARKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S S+C ++QSRRL +R K++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSTSDCAEFQSRRLSIRVRDGKQVRP----LATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGSVRVPEVLRPYL 414
>gi|239989205|ref|ZP_04709869.1| seryl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291446211|ref|ZP_06585601.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces roseosporus NRRL
15998]
gi|291349158|gb|EFE76062.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces roseosporus NRRL
15998]
Length = 425
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 191/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V+LVD ++ D R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVDLVDALLSADELRRSSGVRFDELRNEQKSLG 56
Query: 62 KVI--------GEKMKAKEPVGDSSTLP------------------GNHLHPSVPVSNNE 95
K+I E +K E + GN +H VPV E
Sbjct: 57 KLIPKATPEERTELLKKAEQLKADVKAADAAQDEADADAKRLLLQLGNIVHEDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R G K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFGAEGFEPK-DHLELGESLGAIDMERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+TP+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFTPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVDPADAEAEHRRLLEWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR K K++ + LN T CA R I A+LE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLATLNGTLCAVPRTIVALLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQLPDGSVRVPEVLRPYL 414
>gi|254393739|ref|ZP_05008859.1| seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294813672|ref|ZP_06772315.1| Seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|326441924|ref|ZP_08216658.1| seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197707346|gb|EDY53158.1| seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294326271|gb|EFG07914.1| Seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 425
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 197/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++VELVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVELVDALLSADERRRSSGVRFDELRSEQKQLG 56
Query: 62 KVI--------------GEKMKAKEPVGDSST------------LPGNHLHPSVPVSNNE 95
K++ E++K++ +++ GN +H VPV E
Sbjct: 57 KLVPKASPEERAELLKRAEQLKSEVKAAEATQNEADEEAKRLLLRLGNIVHEDVPV-GGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ ++ T G E + H++L + +D E GA V+G R Y+L G L++
Sbjct: 116 DDFVVLETHGTIRDFAAEGFEPKDHLELGEALRAIDVERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+TP+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFTPMLTPTLVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S C+R+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADQLPLRYAGFSPCYRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVMPEDAEAEHKRLLEWEKQWLTSLELPFQVIDVATGDLGASASRKYDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR + K K++ + LN T CA R I A+LE
Sbjct: 341 PTQGKYRELTSASNCDSFQARRLSVRMREGK----KVQPLATLNGTLCAVPRTIVALLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P LR ++
Sbjct: 397 HQLADGSVRVPPVLRPYL 414
>gi|432331118|ref|YP_007249261.1| seryl-tRNA synthetase [Methanoregula formicicum SMSP]
gi|432137827|gb|AGB02754.1| seryl-tRNA synthetase [Methanoregula formicicum SMSP]
Length = 425
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 198/437 (45%), Gaps = 94/437 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ R D K +++ + + VD+++ D + R+ + + D + +N +
Sbjct: 1 MLDIKFVRA--SPDVVKADLTKRNDLEKIAWVDELLAKDARSRELKVETDQLRQRRNTIA 58
Query: 62 KVIGEKMKA----KEPVGDSSTLPG------------------------NHLHPSVPVSN 93
+ I KA K + ++++LP N LH SVPV
Sbjct: 59 RDINAAKKAGQDAKPLMEEAASLPKKIKDHDTEQEEIRTRMREIQMRLPNILHESVPVGK 118
Query: 94 NEDENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
++ EN V+ G T + +H L T D E A +G YFLKG V L +
Sbjct: 119 DDSENVEVKRVGTPRTFSFEVKNHGQLATEKGWADFERAAKTSGAGFYFLKGNLVLLDMA 178
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
L +YA+ +KGYTP+ P+ + + + V L F++ +YK+ G
Sbjct: 179 LQRYAIDLLEKKGYTPVIPPYMINRTSYEGVTDLGDFEKVMYKIDG-------------- 224
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------DLT 256
DD YLIATSE PI A+++D E LP+R G+S CFR+E T
Sbjct: 225 -DDAYLIATSEHPIGAMYQDEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVHQFT 283
Query: 257 K------------------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFP 286
K + Y VVNI +G + AAKK D+E W P
Sbjct: 284 KVEQFVFCKPEDSWTIHEELLANAEEIFQGLDLPYHVVNICTGDIGTVAAKKYDIEVWMP 343
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
A++E+VSCSNC YQ+ RL +R K + VH LN+TA AT+RV+ AILE +
Sbjct: 344 RENAYKEVVSCSNCTSYQAVRLNIRVRDKSDFESK-QHVHTLNSTAIATSRVLRAILENN 402
Query: 347 QTETG-VRIPDCLRKFV 362
Q E G V IP+ LR ++
Sbjct: 403 QQEDGSVLIPEVLRPYM 419
>gi|291452730|ref|ZP_06592120.1| seryl-tRNA synthetase [Streptomyces albus J1074]
gi|291355679|gb|EFE82581.1| seryl-tRNA synthetase [Streptomyces albus J1074]
Length = 423
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 195/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSLG 56
Query: 62 KVI-----GEKMKAKEPVGDSSTLP---------------------GNHLHPSVPVSNNE 95
K+I EK + + G+ S GN +HP VPV E
Sbjct: 57 KLIPKATGDEKTELLKKAGELSAAVKAADAEKDEADQEAKQLLLRLGNLVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D ++G +R E + H++L + +D E A V+G R Y+L G L++
Sbjct: 117 DFAVLAKHGTIRDFA-AEGFEPRDHLELGEALGAIDVERAAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP +R M+ L Q E++Y +
Sbjct: 176 ALVNAAIAQATAAGFTPMLTPALVRPRAMEGTGFLGQAAEDVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDFYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ S L +A++K D EAW
Sbjct: 281 DKVEMFSYVEPEDAEAEHQRLLDWEIQWLQSLELPFQVIDVASADLGSSASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC ++Q+RRL VR + K K++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSTSNCTEFQARRLSVRMREGK----KVQPLATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGSVRVPEVLRPYL 414
>gi|345000931|ref|YP_004803785.1| seryl-tRNA synthetase [Streptomyces sp. SirexAA-E]
gi|344316557|gb|AEN11245.1| seryl-tRNA synthetase [Streptomyces sp. SirexAA-E]
Length = 425
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 191/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIEND-------LKWRQFRHKADNFN 54
++DL L R DP++VR +Q+ R ++V LVD ++ D +++ + R + +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADELRRSSGVRFDELRSEQKSLG 56
Query: 55 KF---------KNLCSKVIGEKMKAKEPVGDSST----------LPGNHLHPSVPVSNNE 95
K L K K + K L GN +H VPV E
Sbjct: 57 KLIPKATPEERTELLKKADQLKTEVKAADAARDEADAEAKRLLLLLGNVVHEDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R G K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFGAEGFEPK-DHLELGESLGAIDMERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+ P+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFVPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVDPADAEAEHRRLLDWEKQWLTALELPFQVIDVATGDLGASASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR K K++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLSTLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQLADGSVRVPEILRPYL 414
>gi|359150743|ref|ZP_09183562.1| seryl-tRNA synthetase [Streptomyces sp. S4]
Length = 423
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 195/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSLG 56
Query: 62 KVI-----GEKMKAKEPVGDSSTLP---------------------GNHLHPSVPVSNNE 95
K+I EK + + G+ S GN +HP VPV E
Sbjct: 57 KLIPKATGDEKTELLKKAGELSAAVKAADAEKDEADQEAKQLLLRLGNIVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D ++G +R E + H++L + +D E A V+G R Y+L G L++
Sbjct: 117 DFAVLAKHGTIRDFA-AEGFEPRDHLELGEALGAIDVERAAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP +R M+ L Q E++Y +
Sbjct: 176 ALVNAAIAQATAAGFTPMLTPALVRPRAMEGTGFLGQAAEDVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDFYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ S L +A++K D EAW
Sbjct: 281 DKVEMFSYVEPEDAEAEHQRLLDWEIQWLQSLELPFQVIDVASADLGSSASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC ++Q+RRL VR + K K++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSTSNCTEFQARRLSVRMREGK----KVQPLATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGSVRVPEVLRPYL 414
>gi|302559736|ref|ZP_07312078.1| seryl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
gi|302477354|gb|EFL40447.1| seryl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
Length = 425
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 194/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKSLG 56
Query: 62 KVI-----GEKMKAKEPVG---------------------DSSTLPGNHLHPSVPVSNNE 95
K+I EK + E G D N +HP VPV E
Sbjct: 57 KLIPKAAGDEKAELLERTGRLAADVKAADADRDAAASETQDLLLKLSNLVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R D E H++L ++ +D E GA V+G R YFL G L++
Sbjct: 117 DFVTLETHGTIR-DFDAEGFAPRDHLELGQLLAAIDVERGAKVSGSRFYFLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP +R + M L Q +++Y +
Sbjct: 176 ALVNAAMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
+ DD YL+ TSE + A H D + LP+RY G S CFR+E
Sbjct: 221 DKDDLYLVGTSEVALAAYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
LT + +RV+++ SG L +AA+K D EAW
Sbjct: 281 DKVEMFSYVAPEDSQAEHQRLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKYDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S S+C +YQSRRL +R + KK+ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSTSDCTEYQSRRLSIRLREDKKVRP----LATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGSVRVPEVLRPYL 414
>gi|291438592|ref|ZP_06577982.1| seryl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291341487|gb|EFE68443.1| seryl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 425
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 192/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKALG 56
Query: 62 KVI--------GEKMKAKEPVGDSSTLP------------------GNHLHPSVPVSNNE 95
K++ E +K E + GN +HP VPV E
Sbjct: 57 KLVPKATGDEKAELLKKAEQLKADVKAADADRDAAAAETQELLLKLGNLIHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G VR K H++L ++ +D E GA V+G R YFL G L++
Sbjct: 117 DFVTLETHGTVRDFAAEGFEPK-DHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP +R + M L Q +++Y +
Sbjct: 176 ALVNAAIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
+ DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 DKDDLYLVGTSEVPLAAYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
LT + +RV+++ SG L +AA+K D EAW
Sbjct: 281 DKVEMFSYVAPEESQAEHQRLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKYDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S S+C ++QSRRL +R K + + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLQIRVRDGKTVRP----LATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGSVRVPEVLRPYL 414
>gi|182437423|ref|YP_001825142.1| seryl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326778079|ref|ZP_08237344.1| Seryl-tRNA synthetase [Streptomyces griseus XylebKG-1]
gi|238688982|sp|B1VP80.1|SYS_STRGG RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|178465939|dbj|BAG20459.1| putative seryl-tRNA synthetase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326658412|gb|EGE43258.1| Seryl-tRNA synthetase [Streptomyces griseus XylebKG-1]
Length = 425
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 190/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVGLVDALLSADELRRSSGVRFDELRAEQRSLG 56
Query: 62 KVI--------GEKMKAKEPVGDSSTLP------------------GNHLHPSVPVSNNE 95
K+I E +K E + GN +H VPV E
Sbjct: 57 KLIPKATPEERTELLKKAEQLKADVKAADAAQDEAAADAKRLLLQLGNIVHEDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R G K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFGAEGFEPK-DHLELGEALGAIDMERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+ P+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFVPMLTPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVDPADAEAEHRRLLDWEKQWLTALELPFQVIDVATGDLGSSASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR + K K++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLSVRMREGK----KVQPLATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQLPDGSVRVPEMLRPYL 414
>gi|333372863|ref|ZP_08464784.1| serine--tRNA ligase [Desmospora sp. 8437]
gi|332971217|gb|EGK10180.1| serine--tRNA ligase [Desmospora sp. 8437]
Length = 432
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 196/443 (44%), Gaps = 106/443 (23%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
++LDL + R D E+VRK + R +++ +D VI D + R+ + + +N+
Sbjct: 6 VMLDLKVLRQ----DLEQVRKRLEHRGEDISGLDSVIRLDERRRELLRETEQLKNRRNVV 61
Query: 61 SKVIGEKMKAKEPVGDSS-----------------------------TLPGNHLHPSVPV 91
SK + +K KA E D+ TLP N H SVPV
Sbjct: 62 SKEVAQKKKAGEEAADTIAEMRRVGDRIKELDEEVRQVERELDHVLLTLP-NLPHESVPV 120
Query: 92 SNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
+E++N VR G+ ++S H +L T +D +D E A V G R F KG
Sbjct: 121 GESEEDNQPVRHWGEV---PRWSFEPKPHWELATELDILDFERAAKVTGSRFVFYKGAGA 177
Query: 147 CLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
L+ L Y L EK GYT + P+ + ++ M QL +F E+ + V D+
Sbjct: 178 RLERALFNYMLDLHTEKNGYTEMIPPYMVNRDSMTGTGQLPKFAEDSFAV-------ADT 230
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
D YLI T+E P+ HR L A LP++Y G S FR E
Sbjct: 231 --------DYYLIPTAEVPVTNFHRGEILSAAELPVKYAGFSANFRSEAGSAGRDTRGLI 282
Query: 254 --------DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLD 280
+L K + YRV+ + + L AAKK D
Sbjct: 283 RTHQFNKVELVKLVKPEDSYDELESLVQDAEMVLQQLGLPYRVLLMCTADLGFTAAKKYD 342
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
LE W P SG +RE+ SCSN DYQ+RR +R+ + K EFVH LN + A R +
Sbjct: 343 LEVWLPSSGTYREISSCSNFEDYQARRANIRF--RRDAGSKPEFVHTLNGSGLAIGRTVA 400
Query: 341 AILETHQTETG-VRIPDCLRKFV 362
A+LE +Q E G +RIP+ LR ++
Sbjct: 401 ALLEHYQQEDGSIRIPEVLRPYM 423
>gi|21222366|ref|NP_628145.1| seryl-tRNA synthetase [Streptomyces coelicolor A3(2)]
gi|289770434|ref|ZP_06529812.1| seryl-tRNA synthetase [Streptomyces lividans TK24]
gi|8928384|sp|Q9ZBX1.1|SYS_STRCO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|3928737|emb|CAA22233.1| seryl-tRNA synthase [Streptomyces coelicolor A3(2)]
gi|289700633|gb|EFD68062.1| seryl-tRNA synthetase [Streptomyces lividans TK24]
Length = 425
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 192/437 (43%), Gaps = 99/437 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKGLG 56
Query: 62 KVIG--------EKMKAKEPVGDSSTLP------------------GNHLHPSVPVSNNE 95
K+IG E +K E + GN +HP VPV E
Sbjct: 57 KLIGKAAGDEKAELLKRAEQLKTDVKAADAERDAADAETQELLQRLGNLVHPDVPVGGEE 116
Query: 96 D----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
D E E + H++L ++ +D E GA V+G R YFL G L++
Sbjct: 117 DFVTLETHGTHRDFAAEGFEPRDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELA 176
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
LV A+++ G+TP+ TP +R + M L Q +++Y + +
Sbjct: 177 LVNAAIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHL---------------D 221
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED----------------- 254
DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 222 KDDLYLVGTSEVPLAAYHMDEILDGDRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFD 281
Query: 255 ---------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFP 286
LT + +RV+++ S L +AA+K D EAW P
Sbjct: 282 KVEMFSYVLPEDSQAEHQRLLEWEKQWLTSLELPFRVIDVASADLGSSAARKYDCEAWIP 341
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G +REL S S+C ++QSRRL +R + KK+ + LN T CA R I AILE H
Sbjct: 342 TQGKYRELTSTSDCTEFQSRRLSIRVREGKKVRP----LATLNGTLCAVPRTIVAILENH 397
Query: 347 QTETG-VRIPDCLRKFV 362
Q G VR+P+ LR ++
Sbjct: 398 QQADGSVRVPEVLRPYL 414
>gi|76155221|gb|AAX26475.2| SJCHGC08432 protein [Schistosoma japonicum]
Length = 231
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDP+ +R N+ RF+ +LVD V+E D WR+ R +AD+ NK KNLC
Sbjct: 1 MVLDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVDLVVEADENWRKARFRADHLNKVKNLC 60
Query: 61 SKVIGEKMKAKEPVGDS------------------------------------------- 77
SK I +++K E D
Sbjct: 61 SKAIAKRIKDNEDSPDCEITIFKGVLERLDSLADVDLQPLSIAQLKSLSCFIDEEIKTNA 120
Query: 78 ------STLPGNHLH-------PSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDG 124
++ +HL+ P VP+S +E++N I+RT G ++ RK SHVDL+ M+DG
Sbjct: 121 ASLIELESIRQHHLYEIGNLLHPDVPISKDEEDNLIIRTFGKSDFRKPLSHVDLVVMVDG 180
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMR 175
D E G++VAGGRGYFLKGP V L+ ++ AL E+GYT LYTPFFMR
Sbjct: 181 FDGERGSMVAGGRGYFLKGPLVFLEQAIINLALRMLDERGYTTLYTPFFMR 231
>gi|218883767|ref|YP_002428149.1| seryl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
gi|254783023|sp|B8D3V1.1|SYS_DESK1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|218765383|gb|ACL10782.1| Seryl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
Length = 459
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 205/446 (45%), Gaps = 115/446 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWR-------QFRHKAD---------------- 51
+PE ++++ K RF + LVD+ + DL+WR + RH+ +
Sbjct: 12 NPELLKEHVKKRFMDPSLVDEAYKLDLEWRRLLSQVQELRHRHNVISRDISKLPEPERSA 71
Query: 52 NFNKFKNLCSKV--IGEKMKAKEPVGDSSTLP-GNHLHPSVPVSNNEDENGIVRTKGDTE 108
N+ + L S++ + +K+K E + + + L N +H +VPV ++ N +R G +
Sbjct: 72 RINEARELLSQMEELEKKLKEIEDLREEALLKLPNIVHETVPVGPDDTYNVPIRFWGKPK 131
Query: 109 VRKKY-------------------------SHVDLITMIDGV-DSEAGAIVAGGRGYFLK 142
V Y H D++ + + D+ VAG R Y+L
Sbjct: 132 VWSGYIEQFMQQTERYGFKVEYELVNWKPVGHADMLEYVLRLGDTVKAGEVAGSRFYYLF 191
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
V L + L+ YA+ KGY + P+ +R +VM V LA F + +YK+ G
Sbjct: 192 DDIVFLDIALLMYAIDSLTSKGYKLVLPPYMLRHKVMSGVIDLATFKDAIYKIEG----- 246
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---------- 252
+D YLIAT+E + A+H +PE LP++Y+GVS CFR+
Sbjct: 247 ----------EDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAGNRDLK 296
Query: 253 ---------------------------------EDLTKS--IAYRVVNIVSGALNHAAAK 277
EDL K + YRVVNI SG L AAK
Sbjct: 297 GIFRVHQFHKVEQYVYAKPEESWALMEELIGNAEDLFKGLELPYRVVNIASGDLGAPAAK 356
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLE W P G FRE+VSCSN D+QS RL R + K M + E+VH LN+TA A+TR
Sbjct: 357 KYDLETWMPAQGLFREMVSCSNTTDWQSYRLKTRLVRRKGMVK--EYVHTLNSTAIASTR 414
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
I +ILE Q E G V +P LRK++
Sbjct: 415 TITSILENRQNEDGTVTVPRVLRKYL 440
>gi|315425105|dbj|BAJ46777.1| seryl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
gi|315426870|dbj|BAJ48491.1| seryl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
gi|315428030|dbj|BAJ49618.1| seryl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
gi|343485588|dbj|BAJ51242.1| seryl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
Length = 427
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 160/328 (48%), Gaps = 65/328 (19%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKY--SHVDLITMIDGVDSEAGAIVAGGRGYF 140
N H SVP E++N +VR+ G+ R ++ HVD++ + D E A VAG R Y+
Sbjct: 106 NPPHESVPDGETEEDNVVVRSWGEPR-RGEWMRDHVDVLAALGLADLETAAKVAGARFYY 164
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
L V L LVQY L KG+ + P+ + +++M+ V F++ LYKV G
Sbjct: 165 LFDDLVLLNWALVQYGLDFLKGKGFRLVQPPYMLTRKIMEGVVSFQDFEDMLYKVEG--- 221
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------- 253
+D YLI T+E P+ +H L LP+RY G+S CFR+E
Sbjct: 222 ------------EDLYLIGTAEHPLAGLHAGEILDGRKLPLRYAGISPCFRKEAGAHGKD 269
Query: 254 ------------------------------------DLTKSIA--YRVVNIVSGALNHAA 275
+L +S+ YRVVNI G L A
Sbjct: 270 TKGIFRVHQFEKVEQFSFTKPSQSWAEHEFLISNAEELYRSLGLPYRVVNICVGELGPVA 329
Query: 276 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACAT 335
AKK DLE W P +RE+VSCSNC DYQ+ L +RY + + E+ ++VH LN+T AT
Sbjct: 330 AKKYDLEVWMPAQNKYREVVSCSNCTDYQAVGLGIRYREAPHI-EETDYVHTLNSTLIAT 388
Query: 336 TRVICAILETHQTETG-VRIPDCLRKFV 362
R I AILE +QT G V IP+ L+ ++
Sbjct: 389 ERTIVAILENYQTRDGAVEIPEPLQHYL 416
>gi|397780030|ref|YP_006544503.1| seryl-tRNA synthetase [Methanoculleus bourgensis MS2]
gi|396938532|emb|CCJ35787.1| seryl-tRNA synthetase [Methanoculleus bourgensis MS2]
Length = 439
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 192/425 (45%), Gaps = 94/425 (22%)
Query: 16 PEKVRK--NQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKA--- 70
PE +R N++ + + VD+V+E D + R+ + +N+ S+ I KA
Sbjct: 25 PEIIRADLNKRGDTEKLAWVDEVLEMDRRARELTVAIGDLRNRRNVISREISRARKAGDD 84
Query: 71 ---------------KEPVGDSSTLP----------GNHLHPSVPVSNNEDENGIVRTKG 105
KE + TL N LH SVPV ++ EN ++ G
Sbjct: 85 TAALIAEAAELPARIKEAETERDTLTEGVRYRLMRLPNILHESVPVGKDDTENVEIKRWG 144
Query: 106 DTEVRK--KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
+ +V +H L D D E ++G YFLKG L + L ++A+ + +
Sbjct: 145 EPQVPAFDLKNHGALAVEHDWADFERAVKISGAGFYFLKGRLALLDMALQRFAMDLLVAR 204
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
GYTP+ P+ M + + V LA F+ +YK+ E +D+YLIATSE
Sbjct: 205 GYTPIIPPYMMNRAAYEGVTDLADFENVMYKI---------------ESEDEYLIATSEH 249
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------------------ 253
P+ A++ D E LP+R G+S CFR+E
Sbjct: 250 PMAAMYSDEIFEEKDLPLRLAGLSPCFRREIGAHGIDTKGLFRVHQFHKVEQFIYATPEQ 309
Query: 254 --DLTK-------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
DL + + YR+V+I +G + AAKK DLE W P +RE VSCS
Sbjct: 310 SWDLHEELLANAEEVFRQLGLPYRIVSICTGDIGTVAAKKYDLEVWMPREERYREAVSCS 369
Query: 299 NCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDC 357
NC YQ+ RL ++ + EK +VH LN+TA AT+R I AILE +Q E G V IP+
Sbjct: 370 NCTAYQAVRLNIKVRDPTEFTEK-RYVHTLNSTAIATSRAIRAILENYQNEDGSVTIPEP 428
Query: 358 LRKFV 362
LR ++
Sbjct: 429 LRPYL 433
>gi|383637416|ref|ZP_09950822.1| seryl-tRNA synthetase [Streptomyces chartreusis NRRL 12338]
Length = 425
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 193/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKALG 56
Query: 62 KVI-----GEKMKAKEPVGDSSTLP---------------------GNHLHPSVPVSNNE 95
K+I EK + + G + GN +HP VPV E
Sbjct: 57 KLIPKASGDEKAELLKKAGQLAADVKAADADRDAAATETQELLLRLGNLVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R E + H++L ++ +D E GA V+G R YFL G L++
Sbjct: 117 DFVTLETHGTIR-DFTAEGFEPRDHLELGQILGAIDVERGAKVSGSRFYFLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP +R + M L Q +++Y +
Sbjct: 176 ALVNAAMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHLAA------------- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 223 --DDLYLVGTSEVPLAAYHMDEILDAEKLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
LT + YRV+++ S L +A++K D EAW
Sbjct: 281 DKVEMFSYVAPEDSQAEHQRLLEWEKQWLTSLELPYRVIDVASADLGASASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S S+C ++QSRRL +R K++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLSIRVRDGKQVRP----LATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGSVRVPEVLRPYL 414
>gi|455648224|gb|EMF27104.1| seryl-tRNA ligase [Streptomyces gancidicus BKS 13-15]
Length = 425
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 193/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKSLG 56
Query: 62 KVIGEKM---------KAKEPVGDSSTLP-----------------GNHLHPSVPVSNNE 95
K+IG KA++ D N +HP VPV E
Sbjct: 57 KLIGRATGDDKAELLKKAEQLKADVKAADAERDAADTETQELLLKLSNLVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R K H++L ++ +D E GA V+G R YFL G L++
Sbjct: 117 DFVTLETHGSIRDFAAEGFEPK-DHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP +R + M L Q +++Y +
Sbjct: 176 ALVNAAMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
+ DD YL+ TSE + A H D L LP+RY G S CFR+E
Sbjct: 221 DKDDLYLVGTSEVALAAYHMDEILEADKLPMRYAGFSPCFRREAGSHGKDTRGIFRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
LT + +RV+++ SG L +AA+K D EAW
Sbjct: 281 DKVEMFSYVAPEDSQEEHKRLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKYDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S S+C ++QSRRL +R + KK+ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLQIRVREDKKVRP----LATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQQPDGSVRVPEVLRPYL 414
>gi|390938340|ref|YP_006402078.1| seryl-tRNA synthetase [Desulfurococcus fermentans DSM 16532]
gi|390191447|gb|AFL66503.1| seryl-tRNA synthetase [Desulfurococcus fermentans DSM 16532]
Length = 460
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 204/446 (45%), Gaps = 115/446 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWR-------QFRHKAD---------------- 51
+PE ++++ K RF + LVD+ DL+WR + RH+ +
Sbjct: 12 NPELLKEHVKKRFMDPSLVDEAYRLDLEWRRLLSQVQELRHRHNVISRDISKLPEPERSA 71
Query: 52 NFNKFKNLCSKV--IGEKMKAKEPVGDSSTLP-GNHLHPSVPVSNNEDENGIVRTKGDTE 108
N+ + L S++ + +K+K E + + + L N +H +VPV ++ N +R G
Sbjct: 72 RINEARELLSQMEELEKKLKEIEDLREEALLKLPNIVHETVPVGPDDTYNVPIRFWGKPR 131
Query: 109 VRKKY-------------------------SHVDLITMIDGV-DSEAGAIVAGGRGYFLK 142
V Y H D++ + + D+ VAG R Y+L
Sbjct: 132 VWSGYIEQFMQQTERYGFKVEYELVNWKPVGHADMLEYVLRLGDTVKAGEVAGSRFYYLF 191
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
V L + L+ YA+ KG+ + P+ +R +VM V LA F + +YK+ G
Sbjct: 192 DDIVFLDMALLMYAIDSLTSKGFKLVLPPYMLRHKVMSGVIDLATFKDAIYKIEG----- 246
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
+D YLIAT+E + A+H +PE LP++Y+GVS CFR+E
Sbjct: 247 ----------EDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAGNRDLK 296
Query: 254 ----------------------------------DLTKSI--AYRVVNIVSGALNHAAAK 277
+L K + YRVVNI SG L AAK
Sbjct: 297 GIFRVHQFHKVEQYVYAKPEESWALMEELIGNAEELFKGLELPYRVVNIASGDLGAPAAK 356
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLE W P G FRE+VSCSN D+QS RL R + K M + E+VH LN+TA A+TR
Sbjct: 357 KYDLETWMPAQGLFREMVSCSNTTDWQSYRLKTRLVRRKGMVK--EYVHTLNSTAIASTR 414
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
I +ILE HQ E G V IP LRK++
Sbjct: 415 TITSILENHQNEDGTVTIPRVLRKYL 440
>gi|357412315|ref|YP_004924051.1| seryl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
gi|320009684|gb|ADW04534.1| seryl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 425
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 192/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADELRRSSGVRFDELRSEQKSLG 56
Query: 62 KVI--------------GEKMKAKEPVGDSSTLP------------GNHLHPSVPVSNNE 95
K+I +++KA D++ GN +H VPV E
Sbjct: 57 KLIPKATPEERAELLKKADQLKAGVKAADAAQDEADAEAKRLLLQLGNIVHEDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R G K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 DFVVLETHGTIRDFGAEGFEPK-DHLELGEALGAIDMERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ E G+ P+ TP +R M+ L Q E +Y +
Sbjct: 176 ALVNAAIAQATEAGFVPMITPALVRPRAMEGTGFLGQAAENVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGYSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V+++ +G L +A++K D EAW
Sbjct: 281 EKVEMFSYVDPTDAEAEHRRLLDWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL VR K K++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQLPDGSVRVPEALRPYL 414
>gi|407985542|ref|ZP_11166135.1| serine--tRNA ligase [Mycobacterium hassiacum DSM 44199]
gi|407372887|gb|EKF21910.1| serine--tRNA ligase [Mycobacterium hassiacum DSM 44199]
Length = 419
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 190/434 (43%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +PE VR +Q+ R ++ LVD ++ D R KADN + S
Sbjct: 1 MIDLRLLRE----NPEAVRASQRARGEDPGLVDVLLAADAARRAAVTKADNLRAEQKAAS 56
Query: 62 KVIGEKMKAKEPV--------------------------GDSSTLPGNHLHPSVPVSNNE 95
+ +G+ + P ++ N + VP + E
Sbjct: 57 RKVGKAAPEERPALLEQAKELAERVKAAEAEQAEAARAFTEAHMAISNVILDGVP-AGGE 115
Query: 96 DENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ T G+ + HV+L + +D + GA V+G R YFL G LQ+GLVQ
Sbjct: 116 DDYVVLDTVGEPPAIENPRDHVELGESLGLIDLDRGAKVSGARFYFLTGAGALLQLGLVQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A+ I+ G+T + P +R E+M L E+Y+V E DD
Sbjct: 176 LAVRLAIDNGFTLMVPPVLVRPEIMSGTGFLGAHAAEVYRV---------------EADD 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H D L + P+RY G+STCFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHADEILDLSGGPLRYAGLSTCFRREAGSHGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV++I +G L +AA+K D EAW P
Sbjct: 281 GFIYCTPDEAEAEHQRLLDWQRQMLAKIEVPYRVIDIAAGDLGASAARKFDCEAWIPSQQ 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL VRY + N K + LN T ATTR + AILE HQ
Sbjct: 341 TYRELTSTSNCTTFQARRLAVRY---RDENGKPQIAATLNGT-LATTRWLVAILENHQQP 396
Query: 350 TG-VRIPDCLRKFV 362
G VR+P+ L FV
Sbjct: 397 DGSVRVPEALVPFV 410
>gi|294630258|ref|ZP_06708818.1| seryl-tRNA synthetase [Streptomyces sp. e14]
gi|292833591|gb|EFF91940.1| seryl-tRNA synthetase [Streptomyces sp. e14]
Length = 425
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 193/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++ R +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRARASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKALG 56
Query: 62 KVI-----GEKM----KAKEPVGDSSTLP-----------------GNHLHPSVPVSNNE 95
K+I EK KA + D GN +HP VPV E
Sbjct: 57 KLIPKASGDEKAELLKKASQLAADVKAADAERDAADAETQELLLQLGNLVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R D E H++L ++ +D E GA V+G R YFL G L++
Sbjct: 117 DFVTLETHGTIR-DFDAEGFAPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP +R + M L Q +++Y +
Sbjct: 176 ALVNAAMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
+ DD YL+ TSE + A H D + LP+RY G S CFR+E
Sbjct: 221 DKDDLYLVGTSEVALAAYHMDEIIDAERLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
LT + +RV+++ SG L +AA+K D EAW
Sbjct: 281 DKVEMFSYVTPEESQEEHRRLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S S+C ++QSRRL +R K++ + LN T CA R I AILE
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLSIRVRDGKQVRP----LATLNGTLCAVPRTIVAILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGSVRVPEVLRPYL 414
>gi|261872052|gb|ACY02860.1| seryl-tRNA synthetase 1 [Streptomyces sp. ATCC 700974]
Length = 424
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 191/437 (43%), Gaps = 100/437 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P++VR +Q+ R ++V+LVD ++ D R + D +
Sbjct: 1 MIDLRLLRE----NPDRVRASQRSRGEDVDLVDALLSVDELRRSSGVRFDGLRAEQRSLG 56
Query: 62 KVI--------------GEKMKAKEPVGDSSTLP-----------GNHLHPSVPVSNNED 96
K+I E++KA + GN +H VPV ED
Sbjct: 57 KLIPKATPEERAELLKKAEQLKADVKADAAQDEAAADAKRLLLQLGNIVHEDVPVGGEED 116
Query: 97 -----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
+G +R G K H++L + +D E GA V+G R Y+L G L++
Sbjct: 117 FVVLETHGTIRDFGAEGFEPK-DHLELGEALGAIDMERGAKVSGSRFYYLTGVGALLELA 175
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
LV A+++ E G+TP+ TP +R M+ L Q E +Y + E
Sbjct: 176 LVNAAIAQATEAGFTPMLTPALVRPRAMEGTGFLGQAAENVYHL---------------E 220
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------- 258
DD YL+ TSE P+ A H D + LP+RY G S CFR+E T
Sbjct: 221 KDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFD 280
Query: 259 --------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFP 286
+ ++V+++ + L +A++K D EAW P
Sbjct: 281 KVEMFSYVDPADAEAEHRRLLEWEKQWLTGLELPFQVIDVATADLGASASRKFDCEAWIP 340
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G +REL S SNC +Q+RRL VR K K++ + LN T CA R I A+LE H
Sbjct: 341 TQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLATLNGTLCAVPRTIVALLENH 396
Query: 347 QTETG-VRIPDCLRKFV 362
Q G VR+P+ LR ++
Sbjct: 397 QLPDGSVRVPEVLRPYL 413
>gi|320100908|ref|YP_004176500.1| seryl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
gi|319753260|gb|ADV65018.1| seryl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
Length = 459
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 201/446 (45%), Gaps = 115/446 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG--------- 65
+PE+++++ K RF + LVD+ DL+WR+ + N+ S+ I
Sbjct: 12 NPEQLKEHVKKRFMDPSLVDEAYRLDLEWRKMLSQVQELRHRHNVISRDISRLPEPERSL 71
Query: 66 ----------------EKMKAKEPVGDSSTLP-GNHLHPSVPVSNNEDENGIVRTKGDTE 108
+K++ E + D + L N +H SVP+ ++ N +R G +
Sbjct: 72 RINEAKELLSQLEELEKKLRELEELRDEALLKLPNTVHESVPIGPDDTYNVPIRFWGTPK 131
Query: 109 V-----------RKKYS--------------HVDLITMIDGV-DSEAGAIVAGGRGYFLK 142
V ++Y H D++ + + D+ VAG R Y+L
Sbjct: 132 VWTGHLEQFKQQTERYGFKVDYKLIEWRPVGHADMLENVLRLGDTVKAGEVAGSRFYYLF 191
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
V L + L+ YA+ KGY + P+ +R +VM V LA F + +YK+ G
Sbjct: 192 DDIVFLDMALLMYAIDSLTSKGYRLVLPPYMLRHKVMSGVIDLATFKDAIYKIEG----- 246
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DLT 256
+D YLIAT+E + A+H +PE LP++Y+GVS CFR+E DL
Sbjct: 247 ----------EDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAGNRDLK 296
Query: 257 K---------------------------------------SIAYRVVNIVSGALNHAAAK 277
+ YR+VNI SG L AAK
Sbjct: 297 GIFRVHQFHKVEQYVYAKPEESWSLMEELIGNAEELFRGLELPYRIVNIASGDLGAPAAK 356
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLE W P G FRE+VSCSN D+QS RL R + + M + E+VH LN+TA A+TR
Sbjct: 357 KYDLETWMPAQGLFREMVSCSNTTDWQSFRLKTRLIRRRGMIK--EYVHTLNSTAIASTR 414
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
I +ILE HQ E G V IP LRK++
Sbjct: 415 AITSILENHQNEDGTVTIPKALRKYL 440
>gi|374628558|ref|ZP_09700943.1| seryl-tRNA synthetase [Methanoplanus limicola DSM 2279]
gi|373906671|gb|EHQ34775.1| seryl-tRNA synthetase [Methanoplanus limicola DSM 2279]
Length = 425
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 197/439 (44%), Gaps = 98/439 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVEL--VDKVIENDLKWRQFRHKADNFNKFKNL 59
+L+L R +P+ VR + R +L +D ++ D+K R+ + + + +N+
Sbjct: 1 MLELKFIRN----NPDVVRADLNKRGDEEKLLWIDDLLAKDIKSREMQTEINTMRARRNV 56
Query: 60 CSKVIGEKMKAKEPVG----DSSTLPG------------------------NHLHPSVPV 91
S+ I + KAKE ++ +LP N LH +VPV
Sbjct: 57 ISREINDARKAKEDFSGLLEEAKSLPARIKEDEAELEEINAKLKYYQMRIPNLLHETVPV 116
Query: 92 SNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
++ EN V+ G+ V + +H +L + D E A ++G Y LKG +
Sbjct: 117 GADDSENVEVKKWGEAVVPSFELKNHGELAVEKNLADFERAARISGSGFYMLKGNLAMMD 176
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L + A+ +GYTP+ P+ M + + V LA F+ +Y + G
Sbjct: 177 LALQRLAVDLLTGRGYTPIIPPYMMNRAAYEGVTDLADFENVMYAIDG------------ 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
+D++LIATSE P+ A++ D E LPIR G+S CFR+
Sbjct: 225 ---EDEFLIATSEHPMAAMYMDEIFEEKDLPIRMAGISPCFRREIGAHGLDTRGLFRVHQ 281
Query: 253 --------------------------EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAW 284
EDL + + YRVVNI +G + AAKK D+E W
Sbjct: 282 FNKVEQFIYCKPEDSWAMHEELLKNSEDLYQMLGLPYRVVNICTGDIGTVAAKKYDMEVW 341
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P +RE+VSCSNC YQS RL ++ K FVH LN+TA ATTR I AI+E
Sbjct: 342 MPREETYREVVSCSNCTAYQSVRLNIKVRDAHDFETK-NFVHTLNSTAVATTRTIRAIME 400
Query: 345 THQTETG-VRIPDCLRKFV 362
+Q E G V +P LR ++
Sbjct: 401 NYQEEGGTVVVPKVLRPYM 419
>gi|345016369|ref|YP_004818723.1| seryl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
gi|344042718|gb|AEM88443.1| Seryl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
Length = 412
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 189/421 (44%), Gaps = 97/421 (23%)
Query: 19 VRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI-----GEKMKAKEP 73
+R +Q+ R ++V +VD ++ D + R + D + K+I EK + +
Sbjct: 1 MRASQRARGEDVGIVDALLTADERRRSSSVRFDELRAEQKALGKLIPKASGDEKAELLKK 60
Query: 74 VGDSST---------------------LPGNHLHPSVPVSNNEDENGIVRTKG-----DT 107
G+ S GN +HP VPV ED+ ++ T G D
Sbjct: 61 AGELSAAVKAADAEQDAAAEETQQLLLQLGNLVHPEVPV-GGEDDFAVLETIGTPRDFDA 119
Query: 108 EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTP 167
E H++L ++ +D+E GA V+G R Y+L G L+ LV A+++ G+TP
Sbjct: 120 EGFAPKDHLELGELLGAIDTERGAKVSGSRFYYLTGIGALLEFALVNAAMAQATAAGFTP 179
Query: 168 LYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICA 227
+ TP ++ + M+ L Q E++Y + + DD YL+ TSE P+ A
Sbjct: 180 VLTPALVKPKAMEGTGFLGQAAEDVYHL---------------DKDDLYLVGTSEVPLAA 224
Query: 228 VHRDSWLPEASLPIRYLGVSTCFRQE---------------------------------- 253
H D L +LP RY G S+CFR+E
Sbjct: 225 YHMDEILEADALPRRYAGFSSCFRREAGSYGKDTRGIFRVHQFDKVEMYVYTTPEDAEAE 284
Query: 254 -----DLTKS------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLD 302
D K + +RVV++ SG L +A +K D EAW P G +REL S SN +
Sbjct: 285 HQRLLDWEKQWLTSLELPFRVVDLASGDLGSSATRKFDCEAWIPTQGKYRELTSTSNTTE 344
Query: 303 YQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
+QSRRL +R + KK+ + LN T CA TR I AILE HQ G VR+P+ LR F
Sbjct: 345 FQSRRLSIRMREGKKVRP----LATLNGTLCAVTRTIVAILENHQQADGSVRVPEALRPF 400
Query: 362 V 362
+
Sbjct: 401 L 401
>gi|284988898|ref|YP_003407452.1| seryl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
gi|284062143|gb|ADB73081.1| seryl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
Length = 433
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 190/441 (43%), Gaps = 103/441 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R P+ V+ +Q+ R + VD+++ D R+ + D+ + S
Sbjct: 1 MIDLRLVREH----PDLVKASQRARGADESRVDELLAADAARREAVKRTDDLRAEQKAAS 56
Query: 62 KVIGEKMKAKEPV--------------------GDSSTLPGNHL------HPSVPVSNNE 95
+ + + + P G + L HL H VP E
Sbjct: 57 QAVKKASSEERPAVLDRARALAAEVKDAEEALRGADAALRAAHLRIANVVHDGVP-PGGE 115
Query: 96 DENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +RT G D VR H+++ + +D+E GA V+G R YFL GP L+
Sbjct: 116 DDAVTLRTVGEVPAYDFPVR---DHLEIGEALGAIDTERGAKVSGARFYFLTGPGAMLEF 172
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L Q A+ + + G+TP+ P +R E M+ L + DEE+Y+V
Sbjct: 173 ALAQLAIGQAVSAGFTPVVAPALVRPEAMEGTGFLGEHDEEVYRV--------------- 217
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE + + + L ++ P+RY G S+CFR+E +
Sbjct: 218 ERDDLYLVGTSEVALAGMRSNEVLDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHWF 277
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ YRVV+I +G L +AA+K D+EAWF
Sbjct: 278 DKVEMFSFCRPEDAAEEHRRLLAWEEEFLQALELPYRVVDIAAGDLGTSAARKYDIEAWF 337
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S S+C +Q+RRL RY + N+ LN T CA R I +LE
Sbjct: 338 PSQGTYRELTSTSDCTTFQARRLNTRYRDAEGKNQT---AATLNGTLCAVARTIACLLEV 394
Query: 346 HQTETG-VRIPDCLRKFVPAV 365
HQ G V +P LR ++ V
Sbjct: 395 HQRADGSVYVPKALRPWLGGV 415
>gi|340345509|ref|ZP_08668641.1| Seryl-tRNA synthetase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520650|gb|EGP94373.1| Seryl-tRNA synthetase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 420
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 197/428 (46%), Gaps = 102/428 (23%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPV 74
+P+++R K R L D+++E D K R K D K KN + I +K K+ E +
Sbjct: 10 NPQRIRDMLKARAVEFNL-DELVEFDQKRRDLILKTDKMRKKKNQIALEISQKKKSGEDI 68
Query: 75 GD-----------------------------SSTLPGNHLHPSVPVSNNEDENGIVRTKG 105
+ T+P N +H SVP+ +E N ++ G
Sbjct: 69 SPILSEMKNISGELTKLESLQEEVEKKYSNLALTIP-NLIHESVPIGKDETANIEIKKWG 127
Query: 106 -----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW 160
D ++ H+D+ +D VD E A VAG R Y+LK V L L+ Y L
Sbjct: 128 TIPKFDFKIN---DHIDISANLDLVDLERAAKVAGARFYYLKNDLVRLNQSLIHYGLDFL 184
Query: 161 IEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIAT 220
+EK Y+ + P+ + ++ M+ F+E +YK+ + +D Y+I T
Sbjct: 185 VEKNYSLVQPPYMINRQSMEGAIIADDFEEVIYKI---------------DNEDLYMIGT 229
Query: 221 SEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------------------- 253
SE + A+ + + LP+R+ GVS CFR+E
Sbjct: 230 SEHAMAAMRSNEIIEGKDLPLRFAGVSPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVFAR 289
Query: 254 --------DLTKSIA----------YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELV 295
+ S+A Y+V+ + SG + +AK D+EAW G A+RE+V
Sbjct: 290 PEESWKEHERMLSVAEEFYQKLEIPYKVMLLSSGDMGKVSAKTYDIEAWMAGQNAYREIV 349
Query: 296 SCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRI 354
SCSNCLDYQ+RRL +R+ K NE+ +++H LN+T AT+RV+ +I+E QT G + I
Sbjct: 350 SCSNCLDYQARRLKIRF--RDKTNEETQYLHTLNSTLVATSRVLVSIMENFQTNDGHIVI 407
Query: 355 PDCLRKFV 362
P L+K++
Sbjct: 408 PKVLQKYM 415
>gi|379733780|ref|YP_005327285.1| seryl-tRNA synthetase [Blastococcus saxobsidens DD2]
gi|378781586|emb|CCG01236.1| Seryl-tRNA synthetase [Blastococcus saxobsidens DD2]
Length = 433
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 193/441 (43%), Gaps = 103/441 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR +Q+ R + LVD ++ D+ R+ +AD+ + S
Sbjct: 1 MIDLRLLRD----NPDLVRASQRARGADESLVDALLAADVARREAVKRADDLRAEQKSAS 56
Query: 62 KVIGEKMKAKEPV---------------------GDSS-----TLPGNHLHPSVPVSNNE 95
+ + + + P D++ T N + VP E
Sbjct: 57 QAVKKATPEERPAVLERAKALAAEVREAEEAQRAADAALRAVHTRIPNVVADEVP-PGGE 115
Query: 96 DENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +RT G D VR H+++ + +D E GA V+G R YFL GP L+
Sbjct: 116 DDAVPLRTVGEVPTYDFAVR---DHIEIGETLGAIDMERGAKVSGSRFYFLTGPGALLEF 172
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L Q A+S+ + G+TP+ P +R E M+ L + DEE+Y++
Sbjct: 173 ALAQLAISRAVAAGFTPVIAPALVRPEAMEGTGFLGEHDEEVYRI--------------- 217
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE + +H L ++ P RY G S+CFR+E +
Sbjct: 218 ERDDLYLVGTSEVALAGMHSGEVLELSAGPKRYAGWSSCFRREAGSYGKDTRGIIRVHWF 277
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ YRVV+I +G L +A +K D+EAWF
Sbjct: 278 DKVEMFSFARPEDTAAEHLRLLAWEEEFLQALELPYRVVDIAAGDLGTSATRKYDIEAWF 337
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S S+C +Q+RRL +RY + + K + LN T CA R I +LE
Sbjct: 338 PSQGTYRELTSTSDCTTFQARRLNIRY---RDDDGKTQIAATLNGTLCAIARTIACLLEV 394
Query: 346 HQTETG-VRIPDCLRKFVPAV 365
HQ G V +P LR ++ V
Sbjct: 395 HQQADGSVHVPVALRPWLGGV 415
>gi|154150976|ref|YP_001404594.1| seryl-tRNA synthetase [Methanoregula boonei 6A8]
gi|166222741|sp|A7I890.1|SYS_METB6 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|153999528|gb|ABS55951.1| seryl-tRNA synthetase [Methanoregula boonei 6A8]
Length = 425
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/431 (30%), Positives = 194/431 (45%), Gaps = 109/431 (25%)
Query: 11 EKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMK- 69
E+ G PEK+ VD+++ D + R+ + + D + +N ++ I E K
Sbjct: 19 ERRGTPEKI-----------AWVDEILAKDARSRELKVQTDELRRRRNTIAREINEARKT 67
Query: 70 ---AKEPVGDSSTLPG------------------------NHLHPSVPVSNNEDENGIVR 102
A + +++ LP N LH SVP ++ EN +R
Sbjct: 68 GKDAAPLLREAAELPQKIKANDAEQEEISGIIRTRLMRLPNILHESVPKGKDDTENVEIR 127
Query: 103 TKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYAL 157
G D E++ +H L D E A +G YFLKG V L + L ++AL
Sbjct: 128 RVGTPRTFDFELK---NHGQLAADNGWADFERAAKTSGAGFYFLKGGLVMLDLALQRFAL 184
Query: 158 SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYL 217
+KG+TP+ PF ++++ + V L F++ +YK+ G DD YL
Sbjct: 185 DLLGKKGFTPVIPPFMIKRDSYEGVTDLDDFEKVMYKIDG---------------DDTYL 229
Query: 218 IATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------DLTK----- 257
IATSE PI A+++D E LP+R G+S CFR+E TK
Sbjct: 230 IATSEHPIAAMYQDEIFEEKDLPLRLCGLSPCFRREIGAHGLDTKGLFRVHQFTKIEQFV 289
Query: 258 -------------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFR 292
+ Y VVNI +G + AAKK D+EAW P A++
Sbjct: 290 FCRPENSWQIHEELLANAEEVFTKLGLPYHVVNICTGDIGTVAAKKYDIEAWMPRENAYK 349
Query: 293 ELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG- 351
E+VSCSNC YQ+ L +R + K+ E VH LN+TA AT+R + ILE +Q G
Sbjct: 350 EVVSCSNCTSYQAASLNIRV-RDKENFETKHLVHTLNSTAIATSRALRCILENYQNRDGS 408
Query: 352 VRIPDCLRKFV 362
V IPD LR+++
Sbjct: 409 VTIPDVLRQYM 419
>gi|429201624|ref|ZP_19193076.1| serine--tRNA ligase [Streptomyces ipomoeae 91-03]
gi|428662816|gb|EKX62220.1| serine--tRNA ligase [Streptomyces ipomoeae 91-03]
Length = 425
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 195/440 (44%), Gaps = 105/440 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKSLG 56
Query: 62 KVI-----GEKM----KAKEPVGD-----------------SSTLPGNHLHPSVPVSNNE 95
K+I EK KA + D GN +HP VPV E
Sbjct: 57 KLIPKASGDEKAELLKKASQLAADVKAADAERDAADAETQQLLLQLGNLVHPDVPVGGEE 116
Query: 96 DENGIVRTKGDTEVR-------KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
D V + E+R + H++L T++ +D E GA V+G R YFL G L
Sbjct: 117 D---FVTLETHGEIRDFAAEGFEPKDHLELGTLLGAIDVERGAKVSGSRFYFLTGVGALL 173
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
++ LV A+++ G+TP+ TP +R + M L Q +++Y +
Sbjct: 174 ELALVNAAMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHL------------- 220
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED-------------- 254
+ DD YL+ TSE + A H D L LP+RY G S CFR+E
Sbjct: 221 --DKDDLYLVGTSEVALAAYHMDEILDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVH 278
Query: 255 ------------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEA 283
LT + +RV+++ S L +A++K D EA
Sbjct: 279 QFDKVEMFSYVAPEDSQAEHQRLLEWEKQWLTSLELPFRVIDVASADLGSSASRKFDCEA 338
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
W P G +REL S S+C ++QSRRL +R K +++ + LN T CA R I AIL
Sbjct: 339 WIPTQGKYRELTSTSDCTEFQSRRLQIRVRDGK----QVKPLATLNGTLCAVPRTIVAIL 394
Query: 344 ETHQTETG-VRIPDCLRKFV 362
E HQ G VR+P+ LR ++
Sbjct: 395 ENHQQADGSVRVPEILRPYL 414
>gi|290959073|ref|YP_003490255.1| serine-tRNA ligase [Streptomyces scabiei 87.22]
gi|260648599|emb|CBG71710.1| serine-tRNA ligase [Streptomyces scabiei 87.22]
Length = 425
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 197/440 (44%), Gaps = 105/440 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKSLG 56
Query: 62 KVI--------------GEKMKAKEPVGDSSTLP------------GNHLHPSVPVSNNE 95
K+I E++KA D+ GN +HP VPV E
Sbjct: 57 KLIPKASAEEKAELLKRAEQLKADVKAADAERDAADTETQELLLQLGNLVHPDVPVGGEE 116
Query: 96 DENGIVRTKGDTEVRKKYS-------HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
D V + E+R + H++L T++ +D+E GA V+G R YFL G L
Sbjct: 117 D---FVTLETHGEIRDFTAEGFAPKDHLELGTILGAIDTERGAKVSGSRFYFLTGVGALL 173
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
++ LV A+++ G+TP+ TP +R + M L Q +++Y +
Sbjct: 174 ELALVNAAIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHL------------- 220
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
+ DD YL+ TSE + A H D + LP+RY G S CFR+E
Sbjct: 221 --DRDDLYLVGTSEVALAAYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVH 278
Query: 254 ------------------------DLTKS------IAYRVVNIVSGALNHAAAKKLDLEA 283
D K + +RV+++ S L +A++K D EA
Sbjct: 279 QFDKVEMFSYVAPEDSQAEHQRLLDWEKQWLTSLELPFRVIDVASADLGSSASRKFDCEA 338
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
W P G +REL S S+C ++QSRRL +R K +++ + LN T CA R I AIL
Sbjct: 339 WIPTQGKYRELTSTSDCTEFQSRRLQIRVRDGK----QVKPLATLNGTLCAVPRTIVAIL 394
Query: 344 ETHQTETG-VRIPDCLRKFV 362
E HQ G VR+P+ LR ++
Sbjct: 395 ENHQQADGSVRVPEVLRPYL 414
>gi|295837833|ref|ZP_06824766.1| serine-tRNA ligase [Streptomyces sp. SPB74]
gi|197698265|gb|EDY45198.1| serine-tRNA ligase [Streptomyces sp. SPB74]
Length = 429
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 192/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++VELVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVELVDSLLAADERRRSSGVRFDELRAEQKQLG 56
Query: 62 KVI--------------------------GEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K+I E+ A D GN +HP VPV E
Sbjct: 57 KLIPKAQGDEKQELLKRTGELAAAVKAADAEQSDAAAQTQDLLRRLGNLVHPDVPVGGEE 116
Query: 96 D-----ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D +G +R K H++L ++ +D E A V+G R Y+L G L++
Sbjct: 117 DFALLETHGTIRDFAAEGFAPK-DHLELGHLLGAIDVERAAKVSGSRFYYLSGIGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP +R + M+ L Q +++Y + KD
Sbjct: 176 ALVNAAIAQATAAGFTPMLTPALVRPQAMEGTGFLGQAGQDVYHL-------------KD 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
DD YL+ TSE + H D + LP+RY G S CFR+E
Sbjct: 223 --DDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
LT + +RV+++ +G L +AA+K D EAW
Sbjct: 281 DKVEMFTYVAPEDSEAEHRRLLEWEKQWLTSLGLPFRVIDVATGDLGSSAARKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S S+C ++Q+RRL +R KK + LN T CA +R I A+LE
Sbjct: 341 PTQGKYRELTSTSDCTEFQARRLSIRMRDGKKTRP----LATLNGTLCAVSRTIVALLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGSVRVPEVLRPYL 414
>gi|456387036|gb|EMF52549.1| serS protein [Streptomyces bottropensis ATCC 25435]
Length = 425
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 197/440 (44%), Gaps = 105/440 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKSLG 56
Query: 62 KVI--------------GEKMKAKEPVGDSSTLP------------GNHLHPSVPVSNNE 95
K+I E++KA D+ GN +HP VPV E
Sbjct: 57 KLIPKASAEEKAELLKRAEQLKADVKAADAERDAAATETHELLLQLGNLVHPDVPVGGEE 116
Query: 96 DENGIVRTKGDTEVR-------KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
D V + E+R + H++L T++ +D+E GA V+G R YFL G L
Sbjct: 117 D---FVTLETHGEIRDFTVEGFEPKDHLELGTILGAIDTERGAKVSGSRFYFLTGVGALL 173
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
++ LV A+++ G+TP+ TP +R + M L Q +++Y +
Sbjct: 174 ELALVNAAIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHL------------- 220
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
+ DD YL+ TSE + A H D + LP+RY G S CFR+E
Sbjct: 221 --DKDDLYLVGTSEVALAAYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVH 278
Query: 254 ------------------------DLTKS------IAYRVVNIVSGALNHAAAKKLDLEA 283
D K + +RV+++ S L +A++K D EA
Sbjct: 279 QFDKVEMFSYVAPEDSQAEHQRLLDWEKQWLTSLELPFRVIDVASADLGSSASRKFDCEA 338
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
W P G +REL S S+C ++QSRRL +R K +++ + LN T CA R I AIL
Sbjct: 339 WIPTQGKYRELTSTSDCTEFQSRRLQIRVRDGK----QVKPLATLNGTLCAVPRTIVAIL 394
Query: 344 ETHQTETG-VRIPDCLRKFV 362
E HQ G VR+P+ LR ++
Sbjct: 395 ENHQQADGSVRVPEVLRPYL 414
>gi|146304700|ref|YP_001192016.1| seryl-tRNA synthetase [Metallosphaera sedula DSM 5348]
gi|172046949|sp|A4YI40.1|SYS_METS5 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|145702950|gb|ABP96092.1| seryl-tRNA synthetase [Metallosphaera sedula DSM 5348]
Length = 455
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 139/456 (30%), Positives = 201/456 (44%), Gaps = 121/456 (26%)
Query: 5 LDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI 64
L+L R +P+ + ++ + R N +L +K +E D KWR + + N+ S I
Sbjct: 6 LELIR----NNPDSLMESLRKRNVNPQLAEKAVELDKKWRAILQEVEKLRHEHNVVSSQI 61
Query: 65 G-------------------------EKMKAKEPVGDS--STLPGNHLHPSVPVSNNEDE 97
+++K E D+ TLP N +H SVPV ++
Sbjct: 62 PRLSPEERKKKIEEARNLLSIIEAKEKELKTIEEERDNILRTLP-NVVHESVPVGPDDSY 120
Query: 98 NGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAI------------------------- 132
N ++ G V +K + + ++ + G++ + I
Sbjct: 121 NVPIKVWGKFRVYEKDVN-EFLSQVKGLNPDYEIIKFKPVGHADELEAVLKLGNTAKAGE 179
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
VAG R Y+L L+ L+ YAL KGY+ + P+ +R EV+Q V L F + +
Sbjct: 180 VAGSRFYYLFEDVAWLEQALIAYALDVITSKGYSLVIPPYMLRGEVIQSVIDLDTFKDAI 239
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
YK+ G +D YLIAT+E PI A++ + LP+RY+G+S FR+
Sbjct: 240 YKIEG---------------EDLYLIATAEHPIAALYFKEEIEAERLPLRYVGLSPAFRK 284
Query: 253 E------DLTK---------------------------------------SIAYRVVNIV 267
E DL + YRVVNI
Sbjct: 285 EAGAANKDLKGIFRVHQFNKVEQFIFSLPEDSWKFHEELLGNAEQIFQGLELPYRVVNIA 344
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
SG L AAKK DLE W P FRE+VSCSNC D+Q+ R+ +R+ KK N K FVH
Sbjct: 345 SGDLGACAAKKYDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRFVDRKK-NRK-GFVHT 402
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN+TA ATTR I AILE +Q E G V IP LR ++
Sbjct: 403 LNSTAVATTRAITAILENNQLEDGSVVIPKVLRPYL 438
>gi|374634040|ref|ZP_09706405.1| seryl-tRNA synthetase [Metallosphaera yellowstonensis MK1]
gi|373523828|gb|EHP68748.1| seryl-tRNA synthetase [Metallosphaera yellowstonensis MK1]
Length = 454
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 200/459 (43%), Gaps = 127/459 (27%)
Query: 5 LDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI 64
L+L R+ +P+++ + + R + +VDK +E D KWR + + NL S I
Sbjct: 6 LELIRS----NPQRLMDSLRKRGIDASVVDKAVELDRKWRSVLQEVEKLRHEHNLVSSQI 61
Query: 65 ------GEKMKAKEP-----VGDSS----------------TLPGNHLHPSVPVSNNEDE 97
K K +E + D+ +LP N +H SVP ++
Sbjct: 62 PKLQPEDRKKKIEEARNLLRIIDARERELKEIEEERDNLLKSLP-NLVHESVPEGPDDSY 120
Query: 98 NGIVRTKGDTEVRKKYSHVDLITMIDGV----------------------------DSEA 129
N +R G V +K D+ + +D V ++
Sbjct: 121 NVPIRVWGKFRVYEK----DVQSFLDQVRGLEAQYEVLSFKPIGHADALEQVLRQGNTTK 176
Query: 130 GAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD 189
A VAG R Y+L L++ L+ YA+ KGYT + P+ +R EV++ V L F
Sbjct: 177 AAEVAGSRFYYLFQDVAWLELALIMYAVDVVTSKGYTLIIPPYMLRGEVIKSVIDLETFK 236
Query: 190 EELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTC 249
+ +YK+ E +D YLIAT+E I A++ + LP+RY+G+S
Sbjct: 237 DAIYKI---------------EEEDLYLIATAEHAIAALYYKEEIDATRLPLRYVGLSPA 281
Query: 250 FRQE------DLTK---------------------------------------SIAYRVV 264
FR+E DL + YRVV
Sbjct: 282 FRKEAGAANKDLKGIFRVHQFNKVEQFIFSLPEDSWKLHEELISNAEEIFRGLELPYRVV 341
Query: 265 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEF 324
NI SG L AAKK DLE W P FRE+VSCSNC D+Q+ R+ +RY K N + +
Sbjct: 342 NIASGDLGACAAKKYDLEVWMPAQAKFREMVSCSNCTDWQAFRMRIRYVDRK--NNRKGY 399
Query: 325 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
VH LN+TA ATTR I AILE +Q E G V IP LRK++
Sbjct: 400 VHTLNSTAIATTRAITAILENNQMEDGTVVIPKVLRKYL 438
>gi|297527069|ref|YP_003669093.1| seryl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
gi|297255985|gb|ADI32194.1| seryl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
Length = 459
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 212/476 (44%), Gaps = 130/476 (27%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI------GEKMK 69
PE+++K+ K RF + +VD+ + DL+WR+ N+ S+ I ++ K
Sbjct: 13 PEELKKHVKKRFMDPSIVDEAYKTDLEWRRTLTYIQELRHKHNIASREIPRLKGPDKEKK 72
Query: 70 AKEP---------------------VGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTE 108
KE + +LP N +H +VP+ ++ N +R G +
Sbjct: 73 IKEARQLLKELEKVEKKLKELEEKRLKLLFSLP-NIVHETVPIGPDDTYNVPIRFWGKPK 131
Query: 109 VRKKYS-------------------------HVDLI--TMIDGVDSEAGAIVAGGRGYFL 141
V + ++ H D++ ++ G +AG VAG R Y+L
Sbjct: 132 VWEGFTDQFKEQTEKYGFKVEYEVIDWKPVGHADMLEKVLMLGDTFKAGQ-VAGSRFYYL 190
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
V L + L+ YA+ KGYT + P+ +R +VM V + F + +YK+ G
Sbjct: 191 FNDIVFLDMALLAYAIDYLTSKGYTLVLPPYMLRHKVMMGVIDMDTFKDAIYKIEG---- 246
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DL 255
+D YLIAT+E P+ A+H +PE LP++Y G+S CFR+E DL
Sbjct: 247 -----------EDLYLIATAEHPLAALHAWEDIPEEKLPLKYAGISPCFRKEAGAGNRDL 295
Query: 256 TK---------------------------------------SIAYRVVNIVSGALNHAAA 276
I YR+VNI SG L AA
Sbjct: 296 KGIFRVHQFHKVEQFVYAKPEDSWNIMEELISNAEHLFQGLGIPYRIVNIASGDLGAPAA 355
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
KK DLEAW P G +RE+VSCSN D+Q+ RL +R + K M + E++H LN+TA A+T
Sbjct: 356 KKYDLEAWMPAQGRYREMVSCSNVTDWQAFRLRIRLIRRKGMVK--EYLHTLNSTAIAST 413
Query: 337 RVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
R I AILE Q G V +P LRK++ K+APID K++K
Sbjct: 414 RTITAILENFQEPDGTVIVPKVLRKYLEV-----------FKSAPIDAIHPVKKEK 458
>gi|255513782|gb|EET90047.1| seryl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 431
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 165/326 (50%), Gaps = 51/326 (15%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLK 142
N LH SVP ++ EN +R GDT R +H +++ + ++ + A V+G R Y+L
Sbjct: 105 NILHESVPYGKDDSENVEIRKWGDTGKRISKTHEEVLEKLGMLEMQKAAEVSGARFYYLM 164
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
G V L+ L+++A+ + +KGYT + PF ++KE + L F+E LYK+ E
Sbjct: 165 GDMVRLEQALIRFAIDELSKKGYTVVSPPFMLKKEYYRGATALGDFEELLYKIADPNEAA 224
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED-------- 254
G E+ E + +LI+TSE I A+H LP++Y+G+S CFR+E
Sbjct: 225 GRKDYERIE-SETFLISTSEHAIAAMHAGDLFSGKDLPLKYVGISPCFRREAGAHGKDTK 283
Query: 255 -----------------------------LTKS--------IAYRVVNIVSGALNHAAAK 277
L S I +RVV+I +G + AAK
Sbjct: 284 GIFRVHQFYKVEQFVFSRADESWGYFDELLGNSESIYRKLGIPHRVVDICTGDIGTVAAK 343
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K D+EA+ P G +RE+VSCSNC D+Q+ RL ++Y + +VH LN+TA ATTR
Sbjct: 344 KNDIEAYMPSQGRYREVVSCSNCTDWQAMRLDIKYDDKDGRH----YVHTLNSTAIATTR 399
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
+ AI+E + + G + +P L ++
Sbjct: 400 TMVAIIENYLNDDGSITVPKALVPYM 425
>gi|384564099|ref|ZP_10011203.1| seryl-tRNA synthetase [Saccharomonospora glauca K62]
gi|384519953|gb|EIE97148.1| seryl-tRNA synthetase [Saccharomonospora glauca K62]
Length = 420
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 196/436 (44%), Gaps = 100/436 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R E P+ VR +Q+ R ++V +VD+++ D + R KADN +
Sbjct: 1 MIDLRTLREE----PDVVRASQRARGEDVGVVDRLLSLDAERRSAIAKADNLRAEQKQLG 56
Query: 62 KVIG--------------------------EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K IG E+ +A E + N +HP+VP + E
Sbjct: 57 KRIGKASGEERESLLARGKELAAQVKEAEAEQNRASEEFEKLHRVVPNVVHPAVP-AGGE 115
Query: 96 DENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
D+ +++ G T ++ H++L + +D E GA V+G R YFL G LQ+ L
Sbjct: 116 DDFVVLKHVG-TPREFDFTPKDHLELGEALGALDMERGAKVSGARFYFLTGVGAQLQLAL 174
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ A ++ EKG+ + P +R E+M L E+Y++ P+
Sbjct: 175 LNMAAAQAAEKGFQLMIPPVLVRPEIMAGTGFLGAHSSEVYRL-----------PD---- 219
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------ 254
DD YL+ TSE P+ H D L + P+RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHADEILDLSDGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 255 --------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPG 287
L K + YRV++ +G L +AA+K D EAW P
Sbjct: 280 VEMFVFCEPSDAEEEHEKLLAWEEEMLAKIEVPYRVIDTAAGDLGASAARKYDCEAWIPT 339
Query: 288 SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
A+REL S SNC YQ+RRL VRY + + + + LN T ATTR I AILE HQ
Sbjct: 340 QQAYRELTSTSNCTTYQARRLAVRY---RDADGRPQIAATLNGT-LATTRWIVAILENHQ 395
Query: 348 TETG-VRIPDCLRKFV 362
G VR+P+ LR F+
Sbjct: 396 QADGSVRVPEALRPFL 411
>gi|126466244|ref|YP_001041353.1| seryl-tRNA synthetase [Staphylothermus marinus F1]
gi|166223294|sp|A3DP85.1|SYS_STAMF RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|126015067|gb|ABN70445.1| seryl-tRNA synthetase [Staphylothermus marinus F1]
Length = 459
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 143/476 (30%), Positives = 211/476 (44%), Gaps = 130/476 (27%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWR-------QFRHKADNFNKFKNLCSKVIGEKM 68
PE+++++ K RF + +VD+ + DL+WR + RHK + ++ V EK
Sbjct: 13 PEELKEHVKKRFMDPSIVDEAYKTDLEWRRTLTYIQELRHKHNVVSREIPKLKGVDKEK- 71
Query: 69 KAKEPVGDSS---------------------TLPGNHLHPSVPVSNNEDENGIVRTKGDT 107
K KE +LP N +H +VPV ++ N +R G
Sbjct: 72 KIKEAKQLLKELEEVEKKLKELEEKRQKLLFSLP-NIVHETVPVGPDDTYNVPIRFWGKP 130
Query: 108 EVRKKY-------------------------SHVDLITMIDGV-DSEAGAIVAGGRGYFL 141
V K + H D++ + + D+ VAG R Y+L
Sbjct: 131 RVWKGFIDQFKEQTEKYGFKVEYEVIDWKPVGHADMLEKVLRLGDTFKAGQVAGSRFYYL 190
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
V L + L+ YA+ KGYT + P+ +R +VM V + F + +YK+ G
Sbjct: 191 FNDIVFLDMALLAYAIDYLTSKGYTLVLPPYMLRHKVMMGVIDMDTFKDAIYKIEG---- 246
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
+D YLIAT+E P+ A+H +PE LP++Y+G+S CFR+E
Sbjct: 247 -----------EDLYLIATAEHPLAALHAWEDIPEEELPLKYVGISPCFRKEAGAGNRDL 295
Query: 254 ------------------------DLTK-------------SIAYRVVNIVSGALNHAAA 276
D+ + I YR+VNI SG L AA
Sbjct: 296 KGIFRVHQFHKVEQFVYAKPEDSWDIMEELISNAEHLFRGLGIPYRIVNIASGDLGAPAA 355
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
KK DLEAW P G +RE+VSCSN D+Q+ RL +R + K M + E++H LN+TA A+T
Sbjct: 356 KKYDLEAWMPAQGRYREMVSCSNVTDWQAFRLRIRLIRRKGMVK--EYLHTLNSTAIAST 413
Query: 337 RVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 391
R I AILE Q G V +P LRK++ K+APID K++K
Sbjct: 414 RTITAILENFQEPDGTVIVPKVLRKYLEV-----------FKSAPIDAIHPVKKEK 458
>gi|156937780|ref|YP_001435576.1| seryl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
gi|166222734|sp|A8AB67.1|SYS_IGNH4 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|156566764|gb|ABU82169.1| seryl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
Length = 458
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 167/356 (46%), Gaps = 90/356 (25%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKY------------------------- 113
+LP N +HPSVP +ED N VR G +V K +
Sbjct: 104 SLP-NLVHPSVPEGCDEDHNVPVRFWGKPKVWKGHLEEFEKQTKRWGFEVEHEVVEEKPV 162
Query: 114 SHVDLITMIDGV-DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPF 172
H D++ + + ++ A VA R Y+L V L L+ YA+ +KG+ + P+
Sbjct: 163 GHADMLEKVLRLGNTYKAAQVASSRFYYLFKDLVWLDYALMMYAMDFLSKKGFVLVEPPY 222
Query: 173 FMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDS 232
+R +V++ V + F + +YK+ G +D YLIATSE P+ A +
Sbjct: 223 MVRYKVLRGVIDVETFKDAIYKIEG---------------EDLYLIATSEHPLAAYKMEE 267
Query: 233 WLPEASLPIRYLGVSTCFRQE--------------------------------------- 253
+ E+ LPI+ GVS CFR+E
Sbjct: 268 IIDESELPIKLAGVSPCFRKEAGAGNRDLKGIFRVHQFHKVEQFVFSKPEDSWEVLEELI 327
Query: 254 ----DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRR 307
+L K + YRVVN+ G L AAKK DLE W+P G +RELVS SNC D+QS R
Sbjct: 328 RNAEELVKGLELPYRVVNVCGGELGSPAAKKYDLEVWYPAQGKYRELVSASNCTDWQSYR 387
Query: 308 LLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
L +RY K +K +FVH LN+TA ATTR I AILE HQ G VRIP LRK++
Sbjct: 388 LKIRY--RIKGGKKHDFVHTLNSTALATTRTITAILENHQLPDGRVRIPRALRKYL 441
>gi|302531546|ref|ZP_07283888.1| seryl-tRNA synthetase [Streptomyces sp. AA4]
gi|302440441|gb|EFL12257.1| seryl-tRNA synthetase [Streptomyces sp. AA4]
Length = 422
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 193/429 (44%), Gaps = 94/429 (21%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFN-------------------- 54
DPE VR +Q+ R ++ +VDK+++ D + R AD
Sbjct: 10 DPEAVRASQRARGEDEGVVDKLLDLDTRRRSAIATADKLRAEQKSVSKQVPKASPEDKPA 69
Query: 55 ---KFKNLCSKVIG---EKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTE 108
+ K+L ++V E+ +A E + N +HP P+ ED+ +++T G+
Sbjct: 70 LLARAKDLSAQVKAAEVEQNEASEEFDQLFRVLPNLVHPDAPI-GGEDDFAVLKTVGEVP 128
Query: 109 VR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYT 166
H+DL+ + +D E GA V+G R YFL G LQ+ L+ A+++ G+T
Sbjct: 129 TFDFAPRDHLDLMEGLGALDMERGAKVSGSRFYFLSGVGAQLQLALLNMAVARATANGFT 188
Query: 167 PLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPIC 226
P+ TP +R E+M L E+Y++ +D DD YL+ TSE P+
Sbjct: 189 PMITPSLVRPEIMAGTGFLGAHSSEVYRL-------------RD--DDLYLVGTSEVPLA 233
Query: 227 AVHRDSWLPEASLPIRYLGVSTCFR----------------------------------- 251
H D L ++ P RY G S+C+R
Sbjct: 234 GYHSDEILDLSAGPRRYAGWSSCYRREAGSYGKDTRGIIRVHQFDKVEMFVFAKPEDAEA 293
Query: 252 --------QEDLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCL 301
+ED+ +I YRV++ +G L +A +K D EAW P +REL S SNC
Sbjct: 294 EHERLLGWEEDMLAAIEVPYRVIDTATGDLGTSAYRKYDCEAWVPTQETYRELTSTSNCT 353
Query: 302 DYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRK 360
+Q+RRL VRY + N K + LN T ATTR I AI+E HQ G VR+P LR
Sbjct: 354 TFQARRLSVRY---RDDNGKPQTAATLNGT-LATTRWIVAIVENHQQPDGSVRVPVALRP 409
Query: 361 FVPAVYVNE 369
F+ + V E
Sbjct: 410 FLGGLEVLE 418
>gi|386841200|ref|YP_006246258.1| seryl-tRNA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101501|gb|AEY90385.1| seryl-tRNA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451794494|gb|AGF64543.1| seryl-tRNA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 412
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 190/422 (45%), Gaps = 99/422 (23%)
Query: 19 VRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI---GEKMKAKEPVG 75
+R +Q+ R ++V LVD ++ D + R + D + K+I G + KA E +G
Sbjct: 1 MRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKQLGKLIPKAGAEEKA-ELLG 59
Query: 76 DSSTLP------------------------GNHLHPSVPVSNNED-----ENGIVRTKGD 106
+ L GN +HP VPV ED +G +R G
Sbjct: 60 RAEQLKADVKAAEAERDAADAETQELLLKLGNLVHPDVPVGGEEDFATLETHGTIRDFGA 119
Query: 107 TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYT 166
K H++L ++ +D E GA V+G R YFL G L++ LV A+++ G+T
Sbjct: 120 EGFEPK-DHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNAAIAQATAAGFT 178
Query: 167 PLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPIC 226
P+ TP +R + M L Q +++Y + + DD YL+ TSE P+
Sbjct: 179 PMLTPALVRPQSMAGTGFLGQAAQDVYHL---------------DKDDLYLVGTSEVPLA 223
Query: 227 AVHRDSWLPEASLPIRYLGVSTCFRQED-------------------------------- 254
A H D + LP+RY G S CFR+E
Sbjct: 224 AYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQA 283
Query: 255 ------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCL 301
LT + +RV+++ SG L +AA+K D EAW P G +REL S S+C
Sbjct: 284 EHQRLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKFDCEAWIPTQGKYRELTSTSDCT 343
Query: 302 DYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRK 360
++Q+RRL +R + ++++ + LN T CA R I AILE HQ G VR+P+ LR
Sbjct: 344 EFQARRLSIRV----RDGKQVKPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRP 399
Query: 361 FV 362
++
Sbjct: 400 YL 401
>gi|300782127|ref|YP_003762418.1| seryl-tRNA synthetase [Amycolatopsis mediterranei U32]
gi|384145332|ref|YP_005528148.1| seryl-tRNA synthetase [Amycolatopsis mediterranei S699]
gi|399534009|ref|YP_006546671.1| seryl-tRNA synthetase [Amycolatopsis mediterranei S699]
gi|299791641|gb|ADJ42016.1| seryl-tRNA synthetase [Amycolatopsis mediterranei U32]
gi|340523486|gb|AEK38691.1| seryl-tRNA synthetase [Amycolatopsis mediterranei S699]
gi|398314779|gb|AFO73726.1| seryl-tRNA synthetase [Amycolatopsis mediterranei S699]
Length = 394
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 160/333 (48%), Gaps = 71/333 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAIVAG 135
T+P N +HP PV ED+ +V+ G+ + ++ H++L+ + GVD E GA V+G
Sbjct: 75 TVP-NLVHPDAPV-GGEDDFTVVKHVGEP-TKLGFTPKDHLELLEALGGVDMERGAKVSG 131
Query: 136 GRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV 195
R YFL G LQ+GL+ A+++ +E G+TP+ TP +R E+M L Q E+Y +
Sbjct: 132 SRFYFLTGVGAQLQLGLLNMAIAQALENGFTPMITPSLVRPEIMAGTGFLGQHSSEIYHL 191
Query: 196 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED- 254
DD YL+ TSE P+ H D L P RY G S+C+R+E
Sbjct: 192 AD---------------DDLYLVGTSEVPLAGFHADEILDLNDGPNRYAGWSSCYRREAG 236
Query: 255 -------------------------------------------LTK-SIAYRVVNIVSGA 270
L K + YRV++ +G
Sbjct: 237 SYGKDTRGIIRVHQFDKVEMFVYAKPADAEAEHERLLGWEEQMLAKIEVPYRVIDTATGD 296
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
L +A +K D EAW P +REL S SNC +Q+RRL +RY + N K + LN
Sbjct: 297 LGTSAHRKFDCEAWIPTQETYRELTSTSNCTTFQARRLAIRY---RDDNGKPQIAATLNG 353
Query: 331 TACATTRVICAILETHQTETG-VRIPDCLRKFV 362
T ATTR I AI+E HQ E G VR+P+ LR FV
Sbjct: 354 T-LATTRWIVAIVENHQQEDGSVRVPEALRPFV 385
>gi|374988045|ref|YP_004963540.1| seryl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
gi|297158697|gb|ADI08409.1| seryl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
Length = 425
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 195/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V +VD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVAVVDALLSADERRRSSSVRFDELRAEQKSLG 56
Query: 62 KVI--------------------------GEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K+I E+ +A E GN +HP VPV E
Sbjct: 57 KLIPKASGDEKAELLKKAGELSASVKTADAEQDQAAEETQRLLLQLGNLVHPDVPV-GGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ ++ T G E H++L ++ +D+E GA V+G R Y+L G L+
Sbjct: 116 DDFAVLETVGTPRDFAAEGFTPKDHLELGELLGAIDTERGAKVSGSRFYYLTGVGALLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+ P+ TP ++ + M+ L Q +++Y +
Sbjct: 176 ALVNAAIAQATAAGFIPVLTPALVKPKAMEGTGFLGQAADDVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
+ DD +L+ TSE P+ A H D L + LP RY G S+CFR+E
Sbjct: 221 DKDDLFLVGTSEVPLAAYHMDEILDVSQLPRRYAGFSSCFRREAGSYGKDTRGIFRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
LT + +RV+++ SG L +A +K D EAW
Sbjct: 281 DKVEMFVYTTPEEAEAEHQRLLEWEKQWLTSLELPFRVIDLASGDLGASATRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SN ++QSRRL +R + K++ + LN T CA TR I A+LE
Sbjct: 341 PTQGKYRELTSTSNTTEFQSRRLSIRMREDKRVRP----LATLNGTLCAVTRTIVALLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGSVRVPEGLRPYL 414
>gi|15897519|ref|NP_342124.1| seryl-tRNA synthetase [Sulfolobus solfataricus P2]
gi|284174838|ref|ZP_06388807.1| seryl-tRNA synthetase [Sulfolobus solfataricus 98/2]
gi|384434126|ref|YP_005643484.1| seryl-tRNA synthetase [Sulfolobus solfataricus 98/2]
gi|12643258|sp|O33780.2|SYS_SULSO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|6015871|emb|CAB57698.1| seryl-trna synthetase [Sulfolobus solfataricus P2]
gi|13813768|gb|AAK40914.1| Seryl-tRNA synthetase (serS) [Sulfolobus solfataricus P2]
gi|261602280|gb|ACX91883.1| seryl-tRNA synthetase [Sulfolobus solfataricus 98/2]
Length = 457
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 201/457 (43%), Gaps = 119/457 (26%)
Query: 5 LDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF----NKFKNLC 60
L+L R +PE ++ N K R +V LVDK +E D KWRQ + + N +
Sbjct: 6 LELLRK----NPEDLKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVEKLRHQHNVLSSQI 61
Query: 61 SKVIGEKMKAKEPVGDS-----------------------STLPGNHLHPSVPVSNNEDE 97
SK+ GE+ K K + S+LP N + VP ++
Sbjct: 62 SKLSGEERKKKIEESKNLLKILEEKEKELEEIENERDRLLSSLP-NLVADDVPNGPDDSY 120
Query: 98 NGIVRTKGDTEVR-----------------------KKYSHVDLITMIDGV-DSEAGAIV 133
N ++ G +V K H +++ + + ++ A +
Sbjct: 121 NVPIKFWGKFKVYEGDVQEFLKQIKDAKVNYEVIKWKPKGHAEMLEDVLHLGNTLKAAEI 180
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELY 193
AG R Y+L V L L+ +A+ ++GYT + P+ +R EV+Q V L F + +Y
Sbjct: 181 AGSRFYYLFNDIVWLDFSLLLFAIDYITQQGYTLVLPPYMLRGEVIQSVIDLDTFKDAIY 240
Query: 194 KVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
K+ E +D YLIAT+E PI A+ + + LP+++ G+S FR+E
Sbjct: 241 KI---------------ENEDLYLIATAEHPIAAMFFKEEIEKDKLPLKFAGISPAFRKE 285
Query: 254 ------DLTK---------------------------------------SIAYRVVNIVS 268
DL + YR+VNI S
Sbjct: 286 ASAANKDLKGIFRVHQFHKVEQFIFSTPEDSWKYHSELITNAESIFQQLELPYRIVNIAS 345
Query: 269 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
G L AAKK DLE W P FRE+VSCSNC D+Q+ R+ +RY K N + +VH L
Sbjct: 346 GDLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNRRGYVHTL 403
Query: 329 NATACATTRVICAILETHQTETG-VRIPDCLRKFVPA 364
N+TA A+TR I AILE +Q E G V +P LRK++ A
Sbjct: 404 NSTAIASTRTITAILENYQREDGVVEVPKVLRKYLEA 440
>gi|357400606|ref|YP_004912531.1| Seryl-tRNA synthetase 1 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386356659|ref|YP_006054905.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|337767015|emb|CCB75726.1| Seryl-tRNA synthetase 1 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365807167|gb|AEW95383.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 412
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 181/421 (42%), Gaps = 97/421 (23%)
Query: 19 VRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI-------------- 64
+R +Q+ R ++V LVD ++ D + R H+ D + K+I
Sbjct: 1 MRASQRARGEDVGLVDALLSADERRRSSSHRFDELRAEQKALGKLIPKAAGEEKAGLLKK 60
Query: 65 -GEKMKAKEPVGDSSTLP-----------GNHLHPSVPVSNNEDENGIVRTKGD-----T 107
GE A + L GN +HP+VPV ED ++ T G
Sbjct: 61 AGELSAAVKAADAEQNLAAEEAQALLLRIGNLVHPNVPVGGEEDFT-VLETVGTPRDFAA 119
Query: 108 EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTP 167
E + H++L + +D E A V+G R Y+L G L++ LV A+++ E G+TP
Sbjct: 120 EGFEPKDHLELGQALGAIDVERAAKVSGSRFYYLTGVGALLELALVNAAIAQATEAGFTP 179
Query: 168 LYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICA 227
+ TP ++ M+ L Q E +Y + E DD YL+ TSE P+ A
Sbjct: 180 MLTPALVKPRAMEGTGFLGQAAENVYHL---------------EKDDYYLVGTSEVPLAA 224
Query: 228 VHRDSWLPEASLPIRYLGVSTCFRQEDLTK------------------------------ 257
H D + A LP+RY G S CFR+E T
Sbjct: 225 YHMDEIVEAARLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFCFVAPEEAEAE 284
Query: 258 ---------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLD 302
+ ++V+++ +G L +A++K D EAW P G +REL S SNC +
Sbjct: 285 HQRLLAWEKQWLGALGLPFQVIDVATGDLGASASRKFDCEAWIPTQGKYRELTSASNCDE 344
Query: 303 YQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
+Q+RRL VR + + LN T CA R I AILE HQ G V +P+ LR +
Sbjct: 345 FQARRLSVRMRDERGTRP----LATLNGTLCAVPRTIVAILENHQQADGSVVVPEVLRPY 400
Query: 362 V 362
+
Sbjct: 401 L 401
>gi|333025791|ref|ZP_08453855.1| putative serine-tRNA ligase [Streptomyces sp. Tu6071]
gi|332745643|gb|EGJ76084.1| putative serine-tRNA ligase [Streptomyces sp. Tu6071]
Length = 429
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 190/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V LVD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVGLVDSLLSADERRRSSGVRFDELRAEQKQLG 56
Query: 62 KVI--------------------------GEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K+I E+ A D GN +HP VPV E
Sbjct: 57 KLIPKAQGDEKQELLKRTGELAAAVKAADAEQSDAAAQTQDLLRRLGNLVHPDVPVGGEE 116
Query: 96 DENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D ++ T G + E H++L ++ +D E A V+G R Y+L G L++
Sbjct: 117 D-FALLETHGTIRDFEAEGFAPKDHLELGHLLGAIDVERAAKVSGSRFYYLSGIGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP +R + M L Q +++Y + KD
Sbjct: 176 ALVNAAIAQATAAGFTPMLTPALVRPQAMDGTGFLGQAGQDVYHL-------------KD 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
DD YL+ TSE + H D + LP+RY G S CFR+E
Sbjct: 223 --DDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
LT + +RV+++ +G L +AA+K D EAW
Sbjct: 281 DKVEMFTYVAPEDSEAEHRRLLEWEKQWLTSLGLPFRVIDVATGDLGSSAARKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S S+C ++Q+RRL +R KK + LN T CA R I A+LE
Sbjct: 341 PTQGKYRELTSTSDCTEFQARRLSIRMRDGKKTRP----LATLNGTLCAVPRTIVALLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGSVRVPEVLRPYL 414
>gi|443626125|ref|ZP_21110554.1| putative Serine--tRNA ligase [Streptomyces viridochromogenes Tue57]
gi|443340340|gb|ELS54553.1| putative Serine--tRNA ligase [Streptomyces viridochromogenes Tue57]
Length = 412
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 186/423 (43%), Gaps = 101/423 (23%)
Query: 19 VRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFN----KFKNLCSKVIGEKM-----K 69
+R +Q+ R ++V LVD ++ D + R + D + L K G++ K
Sbjct: 1 MRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKQLGKLIPKASGDEKAELLKK 60
Query: 70 AKEPVGDSSTLP-----------------GNHLHPSVPVSNNEDENGIVRTKGDTEVR-- 110
A + D GN +HP VPV ED V + E+R
Sbjct: 61 ASQLAADVKAADAERDAADAETQELLLQLGNLVHPDVPVGGEED---FVTLETHGEIRDF 117
Query: 111 -----KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGY 165
+ H++L T++ +D E GA V+G R YFL G L++ LV A+++ G+
Sbjct: 118 AAEGFQPKDHLELGTLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNAAMAQATAAGF 177
Query: 166 TPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPI 225
TP+ TP +R + M L Q +++Y + + DD YL+ TSE P+
Sbjct: 178 TPMLTPALVRPQSMAGTGFLGQAAQDVYHL---------------DKDDLYLVGTSEVPL 222
Query: 226 CAVHRDSWLPEASLPIRYLGVSTCFRQED------------------------------- 254
A H D L LP+RY G S CFR+E
Sbjct: 223 AAYHMDEILDAEKLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQ 282
Query: 255 -------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNC 300
LT + +RV+++ S L +AA+K D EAW P G +REL S S+C
Sbjct: 283 AEHQRLLEWEKQWLTSLELPFRVIDVASADLGSSAARKFDCEAWIPTQGKYRELTSTSDC 342
Query: 301 LDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLR 359
++QSRRL +R K +++ + LN T CA R I AILE HQ G VR+P+ LR
Sbjct: 343 TEFQSRRLSIRVRDGK----QVKPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLR 398
Query: 360 KFV 362
++
Sbjct: 399 PYL 401
>gi|332796823|ref|YP_004458323.1| seryl-tRNA synthetase [Acidianus hospitalis W1]
gi|332694558|gb|AEE94025.1| seryl-tRNA synthetase [Acidianus hospitalis W1]
Length = 455
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 207/483 (42%), Gaps = 130/483 (26%)
Query: 5 LDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF----NKFKNLC 60
L+L R +P+++ + K R + L K +E D KWR + + N+ +
Sbjct: 6 LELIR----NNPDELIDSLKKRNMDTSLALKAVELDKKWRSILQEVEKLRHQHNEINSQI 61
Query: 61 SKVIGEKMKAKEPVGDS-----------------------STLPGNHLHPSVPVSNNEDE 97
K+ E+ KAK +LP N + P VPV ++
Sbjct: 62 PKLKPEERKAKIEEAKKLLQILEAKEKELKEIEEQRDEILRSLP-NIISPDVPVGPDDTY 120
Query: 98 NGIVRTKGDTEVRKK-----------------------YSHVDLITMIDGV-DSEAGAIV 133
N ++ G +V +K H D++ + + ++E + V
Sbjct: 121 NVPIKFWGKFKVYEKDLEEFKKQLNGAQVEYEIINWKLVGHADMLENVLKLGNTEKASQV 180
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELY 193
AG R Y+L V L L+ YA+ KGY + P+ +R EV+ V L F + +Y
Sbjct: 181 AGSRFYYLFDDLVWLDFALLLYAIDTMTSKGYRLVLPPYMLRGEVIHAVIDLDTFKDAIY 240
Query: 194 KVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR-- 251
K+ E DD YLIAT+E P+ A++ + + LPI+ +G+S FR
Sbjct: 241 KI---------------ENDDLYLIATAEHPLAALYYKEDIEKEELPIKLVGISPAFRRE 285
Query: 252 -----------------------------------QEDLTKS--------IAYRVVNIVS 268
QE L+ + I YR+VNI S
Sbjct: 286 AGAANKDLKGIFRVHQFHKVEQFIFSLPEDSWKYHQELLSNAEEIFQGLGIPYRIVNIAS 345
Query: 269 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
G L AAKK DLEAW P FRE+VSCSNC D+Q+ R+ +RY K N K +VH L
Sbjct: 346 GDLGACAAKKYDLEAWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKKGYVHTL 403
Query: 329 NATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 387
N+TA A+TR I AILE Q E G V IP LRK++ PF K AP D +
Sbjct: 404 NSTAVASTRTITAILENFQNEDGTVEIPKVLRKYLE----------PF-KAAPKDYIYPR 452
Query: 388 KQK 390
K+K
Sbjct: 453 KKK 455
>gi|229579320|ref|YP_002837718.1| seryl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|259516183|sp|C3NEQ7.1|SYS_SULIY RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|228010034|gb|ACP45796.1| seryl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
Length = 457
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 196/445 (44%), Gaps = 115/445 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS----KVIGEKMKA 70
+PE+++ N K R +V LVDK +E D KWRQ + + N+ S K+ GE+ K
Sbjct: 12 NPEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIPKLSGEERKK 71
Query: 71 KEPVGDS-----------------------STLPGNHLHPSVPVSNNEDENGIVRTKGDT 107
K + STLP N + VP ++ N ++ G
Sbjct: 72 KIEESKNLLKILEDKEKELEKIEVERDRLLSTLP-NLVADDVPNGPDDSYNIPIKFWGKF 130
Query: 108 EVR-----------------------KKYSHVDLITMIDGV-DSEAGAIVAGGRGYFLKG 143
+V K H +++ + + ++ A +AG R Y+L
Sbjct: 131 KVYEGDVEEFLRQTKDANVNYEIIKWKPKGHAEMLEDVLHLGNTLKAAEIAGSRFYYLFN 190
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
V L L+ +A+ ++GYT + P+ +R EV+Q V L F + +YK+
Sbjct: 191 DIVWLDFALLLFAIDYITQQGYTLVLPPYMLRGEVIQSVIDLDTFKDAIYKI-------- 242
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DLTK 257
E +D YLIAT+E I A+ + + LP+++ G+S FR+E DL
Sbjct: 243 -------ENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKG 295
Query: 258 ---------------------------------------SIAYRVVNIVSGALNHAAAKK 278
+ YR+VNI SG L AAKK
Sbjct: 296 IFRVHQFHKVEQFIFSTPEDSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKK 355
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLE W P FRE+VSCSNC D+Q+ R+ +RY K N K +VH LN+TA A+TR
Sbjct: 356 FDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLNSTAIASTRT 413
Query: 339 ICAILETHQTETG-VRIPDCLRKFV 362
I AILE +Q E G V +P LRK++
Sbjct: 414 ITAILENYQREDGVVEVPKVLRKYL 438
>gi|385773492|ref|YP_005646058.1| seryl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
gi|385776117|ref|YP_005648685.1| seryl-tRNA synthetase [Sulfolobus islandicus REY15A]
gi|323474865|gb|ADX85471.1| seryl-tRNA synthetase [Sulfolobus islandicus REY15A]
gi|323477606|gb|ADX82844.1| seryl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
Length = 457
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 203/446 (45%), Gaps = 117/446 (26%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS----KVIGEKMKA 70
+PE+++ N K R +V LVDK +E D KWRQ + + N+ S K+ GE+ K
Sbjct: 12 NPEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIPKLSGEERKK 71
Query: 71 KEPVGDSSTL----------------PGNHLHPSVP------VSNNEDENGIVRTK---- 104
K + +S L + L S+P V N D++ + K
Sbjct: 72 K--IEESKNLLKILEDKEKELEKIEVERDRLLSSLPNLVADDVPNGPDDSYNIPIKFWGK 129
Query: 105 -----GDTE---VRKKYSHVDL-IT---------MIDGV----DSEAGAIVAGGRGYFLK 142
GD E + K ++V+ IT M++ V ++ A +AG R Y+L
Sbjct: 130 FKVYEGDVEEFLRQTKDANVNYEITKWKPKGHAEMLEDVLHLGNTLKAAEIAGSRFYYLF 189
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
V L L+ +A+ ++GYT + P+ +R EV+Q V L F + +YK+
Sbjct: 190 NDIVWLDFALLLFAIDYITQQGYTLVLPPYMLRGEVIQSVIDLDTFKDAIYKI------- 242
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DLT 256
E +D YLIAT+E I A+ + + LP+++ G+S FR+E DL
Sbjct: 243 --------ENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLK 294
Query: 257 K---------------------------------------SIAYRVVNIVSGALNHAAAK 277
+ YR+VNI SG L AAK
Sbjct: 295 GIFRVHQFHKVEQFIFSTPEDSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAK 354
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLE W P FRE+VSCSNC D+Q+ R+ +RY K N K +VH LN+TA A+TR
Sbjct: 355 KFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLNSTAIASTR 412
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
I AILE +Q E G V +P LRK++
Sbjct: 413 TITAILENYQREDGVVEVPKVLRKYL 438
>gi|147921639|ref|YP_684544.1| seryl-tRNA synthetase [Methanocella arvoryzae MRE50]
gi|121677008|sp|Q0W8S5.1|SYS_UNCMA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|110619940|emb|CAJ35218.1| seryl-tRNA synthetase [Methanocella arvoryzae MRE50]
Length = 425
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 194/429 (45%), Gaps = 102/429 (23%)
Query: 16 PEKVRKNQKDR--FKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEP 73
P+ VR + + R + + VD ++ D + R + K D + +N S+ I E KA +
Sbjct: 11 PDVVRADLRKRNDLEKLAWVDDLLAKDSQARAMQVKVDELRRRRNEISREINEARKAGK- 69
Query: 74 VGDSSTLPG-------------------------------NHLHPSVPVSNNEDENGIVR 102
D+S L N L SVPV ++ EN V+
Sbjct: 70 --DTSALMAEARDIPRQIKEAETEMEESRNKVHYYLMRLPNILDDSVPVGKDDTENVEVK 127
Query: 103 TKGDTEVRKKY---SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSK 159
G+ V+K + +H L D E A VAG YFLKG V L + L ++A+
Sbjct: 128 RWGEP-VQKDFEIKNHGLLAVEHGWADFERAAKVAGAGFYFLKGNMVLLDMALQRFAMDL 186
Query: 160 WIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIA 219
+++G+TP+ P+ M ++ + V LA F++ +YK+ G DD YLIA
Sbjct: 187 LVKRGFTPVTPPYMMNRKSYEGVTDLADFEKVMYKIEG---------------DDMYLIA 231
Query: 220 TSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ--------------------------- 252
TSE PI A+++ E LP+R G+S CFR+
Sbjct: 232 TSEHPIGAMYQGEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVHQFHKIEQFVFC 291
Query: 253 --EDLTK----------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFREL 294
ED K + Y VVNI +G + AAKK D+E W P ++E+
Sbjct: 292 KPEDSWKIHEEILANAEAVFQQLGLPYHVVNICTGDIGTVAAKKYDIEVWMPRENTYKEV 351
Query: 295 VSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VR 353
VSCSNC YQ+ RL ++ K K +VH LN+TA AT+R + AILE +Q + G V
Sbjct: 352 VSCSNCTAYQATRLNIKVRDPKDFESK-RYVHTLNSTAIATSRAMRAILENNQQKDGSVL 410
Query: 354 IPDCLRKFV 362
IP+ LR ++
Sbjct: 411 IPEVLRPYM 419
>gi|227830507|ref|YP_002832287.1| seryl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
gi|229581920|ref|YP_002840319.1| seryl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
gi|229585068|ref|YP_002843570.1| seryl-tRNA synthetase [Sulfolobus islandicus M.16.27]
gi|238619970|ref|YP_002914796.1| seryl-tRNA synthetase [Sulfolobus islandicus M.16.4]
gi|284998002|ref|YP_003419769.1| seryl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
gi|259511682|sp|C3N6A0.1|SYS_SULIA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|259511683|sp|C4KHR4.1|SYS_SULIK RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|259511684|sp|C3MQH9.1|SYS_SULIL RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|259516136|sp|C3NGY7.1|SYS_SULIN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|227456955|gb|ACP35642.1| seryl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
gi|228012636|gb|ACP48397.1| seryl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
gi|228020118|gb|ACP55525.1| seryl-tRNA synthetase [Sulfolobus islandicus M.16.27]
gi|238381040|gb|ACR42128.1| seryl-tRNA synthetase [Sulfolobus islandicus M.16.4]
gi|284445897|gb|ADB87399.1| seryl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
Length = 457
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 200/446 (44%), Gaps = 117/446 (26%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS----KVIGEKMKA 70
+PE+++ N K R +V LVDK +E D KWRQ + + N+ S K+ GE+ K
Sbjct: 12 NPEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIPKLSGEERKK 71
Query: 71 KEPVGDSSTL----------------PGNHLHPSVP------VSNNEDENGIVRTK---- 104
K + +S L + L S+P V N D++ + K
Sbjct: 72 K--IEESKNLLKILEDKEKELEKIEVERDRLLSSLPNLVADDVPNGPDDSYNIPIKFWGK 129
Query: 105 -----GDTE--VR--------------KKYSHVDLITMIDGV-DSEAGAIVAGGRGYFLK 142
GD E +R K H +++ + + ++ A +AG R Y+L
Sbjct: 130 FKVYEGDVEEFLRQTKDANVNYEIIKWKPKGHAEMLEDVLHLGNTLKAAEIAGSRFYYLF 189
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
V L L+ +A+ ++GYT + P+ +R EV+Q V L F + +YK+
Sbjct: 190 NDIVWLDFALLLFAIDYITQQGYTLVLPPYMLRGEVIQSVIDLDTFKDAIYKI------- 242
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DLT 256
E +D YLIAT+E I A+ + + LP+++ G+S FR+E DL
Sbjct: 243 --------ENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLK 294
Query: 257 K---------------------------------------SIAYRVVNIVSGALNHAAAK 277
+ YR+VNI SG L AAK
Sbjct: 295 GIFRVHQFHKVEQFIFSTPEDSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAK 354
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLE W P FRE+VSCSNC D+Q+ R+ +RY K N K +VH LN+TA A+TR
Sbjct: 355 KFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLNSTAIASTR 412
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
I AILE +Q E G V +P LRK++
Sbjct: 413 TITAILENYQREDGVVEVPKVLRKYL 438
>gi|381163962|ref|ZP_09873192.1| seryl-tRNA synthetase [Saccharomonospora azurea NA-128]
gi|379255867|gb|EHY89793.1| seryl-tRNA synthetase [Saccharomonospora azurea NA-128]
Length = 421
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 199/443 (44%), Gaps = 100/443 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R E P+ VR +Q+ R ++V +VD+++ D + R ADN +
Sbjct: 1 MIDLRTLREE----PDVVRASQRARGEDVGVVDRLLSLDARRRSAIATADNLRAEQKQLG 56
Query: 62 KVIG--------------------------EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K IG E+ +A E + + N +HP VP + E
Sbjct: 57 KRIGKASGEERESLLARGKELAAQVKAAEAEQKRAGEEFDELHRVVPNVVHPEVP-AGGE 115
Query: 96 DENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
D+ +++ G T ++ H++L + +D E GA V+G R YFL G LQ+ L
Sbjct: 116 DDFVVLKHVG-TPREFDFTPKDHLELGETLGALDMERGAKVSGARFYFLTGIGARLQLAL 174
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ A ++ +E G+ + P +R EVM L E+Y++ P+
Sbjct: 175 LNMAAAQAVENGFQLMIPPVLVRPEVMAGTGFLGAHSSEVYRL-----------PD---- 219
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------ 254
DD YL+ TSE P+ H D + ++ P+RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEIVDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 255 --------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPG 287
L K + YRV++ +G L +AA+K D EAW P
Sbjct: 280 VEMFVFCTPDEAEAEHAKLLAWEEEMLAKIEVPYRVIDTAAGDLGTSAARKYDCEAWVPT 339
Query: 288 SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
A+REL S SNC +Q+RRL VRY + + + + LN T ATTR I AILE HQ
Sbjct: 340 QQAYRELTSTSNCTTFQARRLSVRY---RDEDGRPQIAATLNGT-LATTRWIVAILENHQ 395
Query: 348 TETG-VRIPDCLRKFVPAVYVNE 369
G VR+P+ +R F+ + V E
Sbjct: 396 QPDGSVRVPEAMRPFLGGLSVLE 418
>gi|418462893|ref|ZP_13033928.1| seryl-tRNA synthetase [Saccharomonospora azurea SZMC 14600]
gi|359735235|gb|EHK84197.1| seryl-tRNA synthetase [Saccharomonospora azurea SZMC 14600]
Length = 421
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 199/443 (44%), Gaps = 100/443 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R E P+ VR +Q+ R ++V +VD+++ D + R ADN +
Sbjct: 1 MIDLRTLREE----PDVVRASQRARGEDVGVVDRLLSLDARRRSAIATADNLRAEQKQLG 56
Query: 62 KVIG--------------------------EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K IG E+ +A E + + N +HP VP + E
Sbjct: 57 KRIGKASGEERESLLARGKELAAQVKAAEAEQKRAGEEFDELHRVVPNVVHPQVP-AGGE 115
Query: 96 DENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
D+ +++ G T ++ H++L + +D E GA V+G R YFL G LQ+ L
Sbjct: 116 DDFVVLKHVG-TPREFDFTPKDHLELGETLGALDMERGAKVSGARFYFLTGIGARLQLAL 174
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ A ++ +E G+ + P +R EVM L E+Y++ P+
Sbjct: 175 LNMAAAQAVENGFQLMIPPVLVRPEVMAGTGFLGAHSSEVYRL-----------PD---- 219
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------ 254
DD YL+ TSE P+ H D + ++ P+RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEIVDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 255 --------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPG 287
L K + YRV++ +G L +AA+K D EAW P
Sbjct: 280 VEMFVFCTPDEAEAEHAKLLAWEEEMLAKIEVPYRVIDTAAGDLGTSAARKYDCEAWVPT 339
Query: 288 SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
A+REL S SNC +Q+RRL VRY + + + + LN T ATTR I AILE HQ
Sbjct: 340 QQAYRELTSTSNCTTFQARRLSVRY---RDEDGRPQIAATLNGT-LATTRWIVAILENHQ 395
Query: 348 TETG-VRIPDCLRKFVPAVYVNE 369
G VR+P+ +R F+ + V E
Sbjct: 396 QPDGSVRVPEAMRPFLGGLSVLE 418
>gi|307354815|ref|YP_003895866.1| seryl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
gi|307158048|gb|ADN37428.1| seryl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
Length = 425
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 201/439 (45%), Gaps = 98/439 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDR--FKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+L+L R+ P+ VR + K R + + VD ++ D + R+ + + ++ +N+
Sbjct: 1 MLELKFIRS----SPDVVRADLKKRGDAEKLAWVDDLLAKDERSREMQVEINSMRNRRNI 56
Query: 60 CSKVIGEKMKAKEPVG----DSSTLPG------------------------NHLHPSVPV 91
S+ I + KA + ++ +LP N LH SVPV
Sbjct: 57 ISREINQTRKAGGEISGLLEEAKSLPSKIKDAETELAEIQEKIKFYQMRVPNILHESVPV 116
Query: 92 SNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
++ EN V G+ V + +H +L + E A ++G Y LKG +
Sbjct: 117 GADDSENVEVSRWGEPTVPSFEVKNHGELAIEKGLAEFERAAKISGAGFYILKGRLALMD 176
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ L + A+ E+GYTP+ P+ M + + V L+ F+ +YK+ G
Sbjct: 177 LALQRLAIDLLAERGYTPVMPPYMMNRAAYEGVTDLSDFENVMYKIDG------------ 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
+D++LIATSE P+ A++ D E LP+R G+STCFR+
Sbjct: 225 ---EDEFLIATSEHPMAAMYMDEIFEEKDLPLRLAGISTCFRREIGSHGLDTKGLFRVHQ 281
Query: 253 -------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAW 284
E+L K+ + Y VVNI +G + AAKK D+E W
Sbjct: 282 FNKVEQFIYCKQEDSWRLHEELLKNAEDIFRMLKLPYHVVNICTGDIGTVAAKKYDIEVW 341
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P +RE+VSCSNC YQ+ RL ++ + EK ++VH LN+TA ATTR + AILE
Sbjct: 342 MPREETYREVVSCSNCTAYQAVRLNIKVRDPHEF-EKKDYVHTLNSTAVATTRTLRAILE 400
Query: 345 THQTETG-VRIPDCLRKFV 362
Q E G V IP+ LR ++
Sbjct: 401 NCQEEDGTVVIPEALRPYM 419
>gi|227827797|ref|YP_002829577.1| seryl-tRNA synthetase [Sulfolobus islandicus M.14.25]
gi|259512027|sp|C3MW57.1|SYS_SULIM RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|227459593|gb|ACP38279.1| seryl-tRNA synthetase [Sulfolobus islandicus M.14.25]
Length = 457
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 200/446 (44%), Gaps = 117/446 (26%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS----KVIGEKMKA 70
+PE+++ N K R +V LVDK +E D KWRQ + + N+ S K+ GE+ K
Sbjct: 12 NPEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIPKLSGEERKK 71
Query: 71 KEPVGDSSTL----------------PGNHLHPSVP------VSNNEDENGIVRTK---- 104
K + +S L + L S+P V N D++ + K
Sbjct: 72 K--IEESKNLLKILEDKEKELEKIEVERDRLLSSLPNLVADDVPNGPDDSYNIPIKFWGK 129
Query: 105 -----GDTE--VR--------------KKYSHVDLITMIDGV-DSEAGAIVAGGRGYFLK 142
GD E +R K H +++ + + ++ A +AG R Y+L
Sbjct: 130 FKVYEGDVEEFLRQTKDANVNYEIIKWKPKGHAEMLEDVLHLGNTLKAAEIAGSRFYYLF 189
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
V L L+ +A+ ++GYT + P+ +R EV+Q V L F + +YK+
Sbjct: 190 NDIVWLDFALLLFAIDYITQQGYTLVLPPYMLRGEVIQSVIDLDTFKDAIYKI------- 242
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DLT 256
E +D YLIAT+E + A+ + + LP+++ G+S FR+E DL
Sbjct: 243 --------ENEDLYLIATAEHSVAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLK 294
Query: 257 K---------------------------------------SIAYRVVNIVSGALNHAAAK 277
+ YR+VNI SG L AAK
Sbjct: 295 GIFRVHQFHKVEQFIFSTPEDSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAK 354
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K DLE W P FRE+VSCSNC D+Q+ R+ +RY K N K +VH LN+TA A+TR
Sbjct: 355 KFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLNSTAIASTR 412
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
I AILE +Q E G V +P LRK++
Sbjct: 413 TITAILENYQREDGVVEVPKVLRKYL 438
>gi|452954621|gb|EME60021.1| seryl-tRNA ligase [Amycolatopsis decaplanina DSM 44594]
Length = 422
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 193/430 (44%), Gaps = 100/430 (23%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWR-----------------------QFRHKAD 51
DP+ VR +Q+ R ++ +VDK++ D + R Q +A+
Sbjct: 10 DPDVVRASQRARGEDEGVVDKLLSLDSRRRSSIAAADKLRAEQKSLGKLIPKAQGDERAE 69
Query: 52 NFNKFKNLCSKVIG---EKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTE 108
K K+L ++V E+ +A E L N +HP P ED+ +++ G+
Sbjct: 70 LLAKAKDLAAQVKTAEVEQTEASEEFEQLHRLVPNLVHPDAP-EGGEDDYVVLKHVGEP- 127
Query: 109 VRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
KK+ H++L + +D E GA V+G R YFL G LQ+GL+ A+++
Sbjct: 128 --KKFDFEPKDHLELCEGLGALDMERGAKVSGSRFYFLTGVGAQLQLGLLNMAIAQATAN 185
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
G+TP+ TP +R E+M L E+Y++ +D DD YL+ TSE
Sbjct: 186 GFTPMITPTLVRPEIMAGTGFLGAHSSEVYRL-------------RD--DDLYLVGTSEV 230
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFRQED----------------------------- 254
P+ H D L P RY G S+C+R+E
Sbjct: 231 PLAGYHADEILDLGDGPKRYAGWSSCYRREAGSYGKDTRGIIRVHQFDKVEMFVYTRPED 290
Query: 255 ---------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
L K + YRV++ +G L +A +K D EAW P +REL S S
Sbjct: 291 AEAEHARLLDWEEQMLAKIEVPYRVIDTATGDLGTSAYRKFDCEAWVPSQQTYRELTSTS 350
Query: 299 NCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDC 357
NC +Q+RRL +RY + + + + V LN T ATTR I AILE HQ E G VR+P+
Sbjct: 351 NCTTFQARRLGIRY---RDDDGRPQTVATLNGT-LATTRWIVAILENHQLEDGSVRVPEA 406
Query: 358 LRKFVPAVYV 367
LR F+ V
Sbjct: 407 LRPFLGGTEV 416
>gi|355571231|ref|ZP_09042483.1| Seryl-tRNA synthetase [Methanolinea tarda NOBI-1]
gi|354825619|gb|EHF09841.1| Seryl-tRNA synthetase [Methanolinea tarda NOBI-1]
Length = 425
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 184/410 (44%), Gaps = 98/410 (23%)
Query: 32 LVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPVGD----SSTLP------ 81
+VD ++E D + R + + D + +N ++ I E KA D +S LP
Sbjct: 29 MVDDLLEKDRRSRTLKVEIDKLRQRRNSIAREINEARKAGRDTSDLLQEASRLPEKIKEL 88
Query: 82 ------------------GNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDL 118
N LH SVP+ ++ EN +R G D +R +H +L
Sbjct: 89 ESVIESLSSEITGVLMSLPNILHESVPIGRDDSENLELRRVGTPRTFDFPLR---NHGEL 145
Query: 119 ITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEV 178
D E A AG Y+LKG V L + L ++A+ +KG+ P+ P+ M +
Sbjct: 146 AAECGWADFERAARAAGAGFYYLKGSLVLLDLALQRFAIDLLTKKGFIPVIPPYMMNRSS 205
Query: 179 MQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEAS 238
+ V LA F+ +YK+ E DD YLIATSE P+CA+++D E
Sbjct: 206 YEGVTDLADFENVMYKI---------------EDDDAYLIATSEHPLCAMYQDEIFEERD 250
Query: 239 LPIRYLGVSTCFRQE--------------------------------DLTKS-------- 258
LP+R GVS CFR+E D+ +
Sbjct: 251 LPLRLCGVSPCFRREIGSHGLDTKGLFRVHQFHKVEQFVFCRPEESWDIHEQLLAHAEEI 310
Query: 259 -----IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG 313
+ YRVV+I +G + AAKK D+E W P +RE+VSCSNC YQ+ RL +R
Sbjct: 311 YTLLGLPYRVVSICTGDIGTVAAKKYDIEVWMPREEKYREVVSCSNCTSYQAVRLRIRVR 370
Query: 314 QTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+ K +VH LN+TA AT+R I AILE +Q G V +P L+ ++
Sbjct: 371 DPRNFESK-RYVHTLNSTAVATSRTIRAILENYQEADGRVAVPRVLQPYM 419
>gi|453049258|gb|EME96866.1| seryl-tRNA ligase [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 425
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 193/438 (44%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR +Q+ R ++V++VD ++ D + R + D +
Sbjct: 1 MIDLRLLRE----DPDRVRASQRARGEDVDIVDALLSADERRRSSGVRFDELRAEQKALG 56
Query: 62 KVI-----GEKMKAKEPVGDSSTLP---------------------GNHLHPSVPVSNNE 95
K+I EK + G+ S GN +HP VP E
Sbjct: 57 KLIPKATGDEKAALLKKAGELSAAVKAADAEQDEAAAEAQRLLLGIGNLVHPDVP-RGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ ++ T G E + H++L + +D E GA V+G R Y+L G L++
Sbjct: 116 DDFVVLETVGTPRDFAAEGFEPKDHLELGQSLGAIDVERGAKVSGSRFYYLTGVGALLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
LV A+++ G+TP+ TP ++ M+ L Q +++Y +
Sbjct: 176 ALVNAAIAQATAAGFTPMLTPALVKPRAMEGTGFLGQAAQDVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
E DD YL+ TSE P+ A H D + + LP+RY G S CFR+E T
Sbjct: 221 EKDDFYLVGTSEVPLAAYHMDEIIDASQLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ ++V++ +G L +A++K D EAW
Sbjct: 281 DKVEMFSYVAPEEAEAEHARLLEWEKQWLTSLELPFQVIDTATGDLGASASRKFDCEAWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC ++Q+RRL VR K + + LN T CA R I A+LE
Sbjct: 341 PTQGKYRELTSTSNCDEFQARRLSVRMRDGKNVRP----LATLNGTLCAVPRTIVALLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGTVRVPEVLRPYL 414
>gi|421744738|ref|ZP_16182690.1| seryl-tRNA synthetase [Streptomyces sp. SM8]
gi|406686853|gb|EKC90922.1| seryl-tRNA synthetase [Streptomyces sp. SM8]
Length = 410
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 185/421 (43%), Gaps = 97/421 (23%)
Query: 19 VRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI-----GEKMKAKEP 73
+R +Q+ R ++V LVD ++ D + R + D + K+I EK + +
Sbjct: 1 MRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSLGKLIPKATGDEKTELLKK 60
Query: 74 VGDSSTLP---------------------GNHLHPSVPVSNNED-----ENGIVRTKGDT 107
G+ S GN +HP VPV ED ++G +R
Sbjct: 61 AGELSAAVKAADAEKDEADQEAKQLLLRLGNIVHPDVPVGGEEDFAVLAKHGTIRDFA-A 119
Query: 108 EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTP 167
E + H++L + +D E A V+G R Y+L G L++ LV A+++ G+TP
Sbjct: 120 EGFEPRDHLELGEALGAIDVERAAKVSGSRFYYLTGVGALLELALVNAAIAQATAAGFTP 179
Query: 168 LYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICA 227
+ TP +R M+ L Q E++Y + E DD YL+ TSE P+ A
Sbjct: 180 MLTPALVRPRAMEGTGFLGQAAEDVYHL---------------EKDDFYLVGTSEVPLAA 224
Query: 228 VHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------------------------- 258
H D + LP+RY G S CFR+E T
Sbjct: 225 YHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVEPEDAEAE 284
Query: 259 ----------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLD 302
+ ++V+++ S L +A++K D EAW P G +REL S SNC +
Sbjct: 285 HQRLLDWEIQWLQSLELPFQVIDVASADLGSSASRKFDCEAWIPTQGKYRELTSTSNCTE 344
Query: 303 YQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
+Q+RRL VR + K K++ + LN T CA R I AILE HQ G VR+P+ LR +
Sbjct: 345 FQARRLSVRMREGK----KVQPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPY 400
Query: 362 V 362
+
Sbjct: 401 L 401
>gi|403251675|ref|ZP_10918005.1| seryl-tRNA synthetase [actinobacterium SCGC AAA027-L06]
gi|402915025|gb|EJX36018.1| seryl-tRNA synthetase [actinobacterium SCGC AAA027-L06]
Length = 420
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 193/437 (44%), Gaps = 101/437 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R +PE + +QK R ++ +VD+++ D R+ + ++ +N S
Sbjct: 1 MIDLKALRE----NPEAFKNSQKVRGEDPAIVDQLLAADDARREAISEFESLRAEQNTLS 56
Query: 62 KVIG--------------------------EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K +G ++ +A+E + L N + P+ P+
Sbjct: 57 KAVGAAKGDEKNSLLENAKQLATAVKSADAKRAEAEETANKLALLIANLIDPAAPIGGEA 116
Query: 96 DENGI--VRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
D I V T D E + HV++ +I +D+E GA VAG R Y+L G L++
Sbjct: 117 DFKVIEKVGTPRDFKAEGFEPKDHVEIGKIIKAIDTERGAKVAGARSYYLTGVGALLELA 176
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
LV YA+S ++ G+ P+ P ++ M+ L Q E +Y + ++DE
Sbjct: 177 LVNYAISLAVKAGFIPMIPPVLVKPAAMEGTGFLGQAAENVYHL------------KEDE 224
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------ 253
L YL+ TSE P+ A H D L + LPIRY G S CFR+E
Sbjct: 225 L---YLVGTSEVPLAAYHMDEILEQ--LPIRYAGYSPCFRREAGSYGKDTRGIIRVHQFE 279
Query: 254 -------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFP 286
D S I Y+V+++ SG L +A +K D+EAW P
Sbjct: 280 KVEMFTFCKPEDAQAEHEKLLKWEKDFFDSLEIPYQVIDVASGDLGASAVRKFDIEAWIP 339
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
A+RE+ S SNC +Q+RRL +RY K V LN T A R I AILE +
Sbjct: 340 TQQAYREVTSTSNCTQFQARRLNIRYKDEKATKP----VATLNGTLVAVPRTIVAILENY 395
Query: 347 QTETG-VRIPDCLRKFV 362
Q + G V++P L F+
Sbjct: 396 QQKDGSVKVPKALIPFI 412
>gi|418467887|ref|ZP_13038746.1| seryl-tRNA synthetase [Streptomyces coelicoflavus ZG0656]
gi|371551499|gb|EHN78788.1| seryl-tRNA synthetase [Streptomyces coelicoflavus ZG0656]
Length = 412
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 182/420 (43%), Gaps = 95/420 (22%)
Query: 19 VRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG--------EKMKA 70
+R +Q+ R ++V LVD ++ D + R + D + K+IG E +K
Sbjct: 1 MRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKGLGKLIGKAAGDEKAELLKR 60
Query: 71 KEPVGDSSTLP------------------GNHLHPSVPVSNNED----ENGIVRTKGDTE 108
E + GN +HP VPV ED E E
Sbjct: 61 AEQLKTDVKAADAERDAADAETQELLQRLGNLVHPDVPVGGEEDFVTLETHGTHRDFAAE 120
Query: 109 VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPL 168
+ H++L ++ +D E GA V+G R YFL G L++ LV A+++ G+TP+
Sbjct: 121 GFEPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNAAIAQATAAGFTPM 180
Query: 169 YTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAV 228
TP +R + M L Q +++Y + + DD YL+ TSE P+ A
Sbjct: 181 LTPALVRPQSMAGTGFLGQAAQDVYHL---------------DKDDLYLVGTSEVPLAAY 225
Query: 229 HRDSWLPEASLPIRYLGVSTCFRQED---------------------------------- 254
H D L LP+RY G S CFR+E
Sbjct: 226 HMDEILDAERLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVLPEDTQAEH 285
Query: 255 ----------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDY 303
LT + +RV+++ S L +AA+K D EAW P G +REL S S+C ++
Sbjct: 286 QRLLEWEKQWLTSLELPFRVIDVASADLGSSAARKYDCEAWIPTQGKYRELTSTSDCTEF 345
Query: 304 QSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
QSRRL +R + KK+ + LN T CA R I AILE HQ G VR+P+ LR ++
Sbjct: 346 QSRRLSIRVREGKKVRP----LATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPYL 401
>gi|383829416|ref|ZP_09984505.1| seryl-tRNA synthetase [Saccharomonospora xinjiangensis XJ-54]
gi|383462069|gb|EID54159.1| seryl-tRNA synthetase [Saccharomonospora xinjiangensis XJ-54]
Length = 421
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 189/442 (42%), Gaps = 98/442 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R E P+ VR +Q+ R ++V +VD+++ D + R KADN +
Sbjct: 1 MIDLRTLREE----PDVVRASQRARGEDVGVVDRLLSLDAQRRSAIAKADNLRAEQKQLG 56
Query: 62 KVIGE--------------------------KMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K IG+ + +A E + N +HP VP E
Sbjct: 57 KRIGKASGDERQELLARGKELAAEVKEAEAEQSRASEEFEQLHRVVPNVVHPEVPEGGEE 116
Query: 96 DENGI--VRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
D + V T + + K H++L + +D E GA V+G R YFL G LQ+ L+
Sbjct: 117 DFAVLRHVGTPREFDFTPK-DHLELGEALGAIDMERGAKVSGARFYFLTGIGARLQLALL 175
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
A ++ E G+ + P +R E+M L E+Y + D
Sbjct: 176 TMAAAQATENGFQLMIPPVLVRPEIMAGTGFLGAHSSEVYHLAD---------------D 220
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------- 254
D YL+ TSE P+ H D L P+RY G S+CFR+E
Sbjct: 221 DLYLVGTSEVPLAGYHADEILDLTGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKV 280
Query: 255 -------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 288
L K + YRV++ +G L +AA+K D EAW P
Sbjct: 281 EMFVFCDPSDAEAEHERLLAWEEEMLAKIEVPYRVIDTAAGDLGTSAARKYDCEAWVPTQ 340
Query: 289 GAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQT 348
A+REL S SNC YQ+RRL VRY + + + LN T ATTR I AILE HQ
Sbjct: 341 QAYRELTSTSNCTTYQARRLSVRY---RDAEGRPQTAATLNGT-LATTRWIVAILENHQQ 396
Query: 349 ETG-VRIPDCLRKFVPAVYVNE 369
G VR+P+ LR F+ + V E
Sbjct: 397 PDGSVRVPEALRPFLGGLSVLE 418
>gi|227489079|ref|ZP_03919395.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227543355|ref|ZP_03973404.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
gi|227090960|gb|EEI26272.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227180860|gb|EEI61832.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
Length = 418
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 194/437 (44%), Gaps = 97/437 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R +P+ VR++Q+ R ++ LVDK++ D R KAD + +N
Sbjct: 1 MIDLKFLRE----NPDVVRESQRTRGEDPSLVDKLLAADETRRDAIQKADQLRQEQNGFG 56
Query: 62 KVIGEKMKAKEP--VGDSSTLPG-----------------------NHLHPSVPVSNNED 96
K IG+ A+ P + +S+ L ++ P + ED
Sbjct: 57 KKIGQASPAERPALIEESTALKAKLKDAEAAQKQAEQDVFDIQMQLGNVVEGAP-AGGED 115
Query: 97 ENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
+ +V G+ T + H+D+ + +D E GA V+G R YFLKG LQ+ ++
Sbjct: 116 DFIVVEEVGEKTTFDFEPKDHLDIAENLGILDMERGAKVSGSRFYFLKGLGAQLQLAMMN 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A K IE G+T + TP +R E MQ L Q +E+Y + + D+
Sbjct: 176 LAAQKAIEHGFTLMITPVIVRPETMQGTGFLGQHSDEIYYL---------------QEDN 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------------- 253
+YL+ TSE + H D + + P+ Y G S+CFR+E
Sbjct: 221 QYLVGTSEVALAGYHSDEIIDLSQGPLHYAGWSSCFRREAGSYGKDTRGIIRVHQFDKLE 280
Query: 254 ----------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
D+ +I YR+++I G L +AA+K D EAW P
Sbjct: 281 MFVYCKPEDAEAQHQALLAMEKDMLAAIEVPYRIIDIAGGDLGSSAARKFDTEAWIPTQN 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL +RY + + + + LN T ATTR + AILE HQ
Sbjct: 341 TYRELTSTSNCTTFQARRLKIRY---RDEDGRTQIAATLNGT-LATTRWLVAILENHQQA 396
Query: 350 TG-VRIPDCLRKFVPAV 365
G V IP LR F+ +
Sbjct: 397 DGSVIIPAALRPFMGGI 413
>gi|168700966|ref|ZP_02733243.1| seryl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
Length = 431
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 157/336 (46%), Gaps = 75/336 (22%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
N HP+ PV ED N +V G+ K HVDL +D D EAG VAG + YF
Sbjct: 105 NMTHPAAPVGG-EDANKVVAQFGEPRAFDFKPKDHVDLCEALDLADFEAGTKVAGQKFYF 163
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LK A L++ LVQYA+ ++ GYTP+ TP R EV++ + + +
Sbjct: 164 LKNEAALLEIALVQYAMQTAVKAGYTPIITPDLARVEVLEGIGFMPR------------- 210
Query: 201 KVGDSAPEKDEL-----DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-- 253
D P+ ++ D LIAT+E + +HRD EA LP RY+G+S CFR E
Sbjct: 211 ---DPNPDTRQVYTVADTDLCLIATAEITLGGMHRDRIFDEAELPKRYVGLSHCFRTEAG 267
Query: 254 -------------DLTK------------------------------SIAYRVVNIVSGA 270
TK + + V++ +G
Sbjct: 268 AAGRDTRGLYRVHQFTKVEMFAFCTPETSDAIHEEIRALEEKIFQGLGLCFHVIDTATGD 327
Query: 271 LNHAAAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
L A +K DLEAW PG GA+ E+ S SNC D+Q+RRL +RY K + +F H
Sbjct: 328 LGGPAYRKYDLEAWMPGRGTGGAYGEITSTSNCTDFQARRLGIRY--KGKGFKGTKFAHT 385
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN TA A TR + AILE +Q G V IP+ LR +V
Sbjct: 386 LNGTAVACTRALVAILENYQQADGSVVIPEVLRPWV 421
>gi|325108605|ref|YP_004269673.1| seryl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
gi|324968873|gb|ADY59651.1| seryl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
Length = 428
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 171/343 (49%), Gaps = 74/343 (21%)
Query: 75 GDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAI 132
G S +P N HP PV +D++ VR GD K HV+L+ D +D E+G+
Sbjct: 96 GIQSQVP-NMTHPDAPVGKTDDDSVTVREWGDKPQFEFKARDHVELMESNDLLDLESGSK 154
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE-E 191
V G Y+LK AV L++ LVQ+A+ K +++G+T + TP R EV++ V + DE +
Sbjct: 155 VTGHGFYYLKNEAVLLELALVQFAVEKLVKEGFTIISTPDLARNEVLEGVGFNPRGDEAQ 214
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
+Y V E D L+AT+E + + +D L EA+LP++ G+S CFR
Sbjct: 215 IYSV---------------ENTDLSLVATAEITLGGMLKDEILDEANLPVKTAGISHCFR 259
Query: 252 QE---------------DLTK--------------------------------SIAYRVV 264
E TK I YRV+
Sbjct: 260 TEAGAHGRATRGIYRVHQFTKVEIFGFTTPDTAVSDEYHQMILRIEEEIFQGLGIPYRVL 319
Query: 265 NIVSGALNHAAAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVR-YGQTKKMNE 320
+I +G + A +K DLEAW PG +G + E+ SCSNC DYQSRRL +R G+ KK
Sbjct: 320 DIATGDMGGPAYRKFDLEAWMPGRGEAGEYGEVTSCSNCTDYQSRRLNIRCRGKEKK--- 376
Query: 321 KIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+FVH LN TA A +R + A++E +Q G +R+P+ L+K+V
Sbjct: 377 GTQFVHTLNGTAVAVSRAMIALVENYQQADGSIRVPEALQKWV 419
>gi|256389475|ref|YP_003111039.1| seryl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
gi|256355701|gb|ACU69198.1| seryl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
Length = 425
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 193/437 (44%), Gaps = 99/437 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L RT DPE+VR +Q+ R ++ LVD ++ D R + D + +
Sbjct: 1 MIDLRLLRT----DPERVRASQRARGEDPALVDALLSADEARRAAVSRFDTLRNEQKVLG 56
Query: 62 KVI----GEK----MKAKEPVGDSSTLPGNHLHPS--------VPVSN---------NED 96
K I GE+ ++ + + D H + + +SN ED
Sbjct: 57 KQIPKAAGEEKAALLEQAKKLADGVKAAEADQHEADDVLKQLQLSLSNVVIDGVPEGGED 116
Query: 97 ENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
+ + T G + + HV+L ++ +D E G V G R Y+L G L++
Sbjct: 117 DFVLRETVGTPRDFAADGFEPRDHVELGKLLGAIDLERGVKVGGARQYYLTGVGALLEIA 176
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
L+ A+++ G+TP+ TP ++ E M L Q E +Y +
Sbjct: 177 LLNMAMAQATTYGFTPMITPSLVKPEAMAGTGFLGQAAENVYHLTE-------------- 222
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED----------------- 254
DD YL+ TSE P+ A H D L A LP+RY G S+C+R+E
Sbjct: 223 -DDMYLVGTSEVPLAAYHMDEILDAAKLPLRYAGYSSCYRREAGSYGKDTRGIIRVHQFE 281
Query: 255 ---------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFP 286
LT I +RV+++ +G L +AA+K D EAW P
Sbjct: 282 KVEMFSYVLPEEAEAEHLRLLGWEKEFLTALEIPFRVIDVAAGDLGSSAARKYDCEAWIP 341
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G +RE+ S SNC ++Q+RRL +R + + ++ + LN T CA TR+I AILE H
Sbjct: 342 TQGKYREVTSTSNCTEFQARRLQIRM----RGADGVKPLATLNGTLCAMTRMIVAILENH 397
Query: 347 QTETG-VRIPDCLRKFV 362
Q G V +P LR ++
Sbjct: 398 QNADGSVTVPAALRPYL 414
>gi|302348069|ref|YP_003815707.1| Seryl-tRNA synthetase [Acidilobus saccharovorans 345-15]
gi|302328481|gb|ADL18676.1| Seryl-tRNA synthetase [Acidilobus saccharovorans 345-15]
Length = 459
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 144/475 (30%), Positives = 211/475 (44%), Gaps = 124/475 (26%)
Query: 5 LDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI 64
L+L RT +PE +R+ + R +V+++D+ ++ D +WR+ + + + N+ S I
Sbjct: 6 LNLLRT----NPEALREVARKRQIDVKIIDEAVQLDEQWRKVQAEINELRHQHNVISAAI 61
Query: 65 ----GEK-----MKAKE---PVGDSST---------------LPGNHLHPSVPVSNNEDE 97
GE+ +AKE + D+ LP N + VPV E+
Sbjct: 62 PKAKGEEREKLLAQAKELSRELEDAERRLSELEAKREEALWRLP-NVVLDDVPVGG-EEA 119
Query: 98 NGIVRTKGDTEVRKKY-------------------------SHVDLITMIDGV-DSEAGA 131
VR G V +Y H D++ + + D+E +
Sbjct: 120 TRPVRFWGTPRVYHEYLDAFKAQTEAYGFNVPYELIDWKPVGHADMLENVLKLGDTEKAS 179
Query: 132 IVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEE 191
VAG R Y+L V L L+ YA+ K KGYT + P+ +R +V+ V LA F +
Sbjct: 180 EVAGSRFYYLFDDLVWLDFALLLYAIDKLTSKGYTLVLPPYMLRYKVINSVIDLATFQDA 239
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
+YK+ E DD YLIAT+E + A++ + L + LP +++G+S FR
Sbjct: 240 IYKI---------------ENDDLYLIATAEHSLAAMYYNEELYDDELPKKFVGISPAFR 284
Query: 252 QE------DLTK---------------------------------------SIAYRVVNI 266
+E DL I YRVVNI
Sbjct: 285 REAGAANKDLKGIFRVHQFHKVEQFVFSKPEESQKIHEELISNAEGLFQGLGIPYRVVNI 344
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVH 326
SG L A KK DLEAW P G +RE+VS SNC D+Q+ RL +R + K M E+ E+VH
Sbjct: 345 ASGDLGACAVKKYDLEAWMPAQGKYREMVSASNCTDWQAYRLNIRLIRRKGM-ERGEYVH 403
Query: 327 MLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAP 380
LN+T A+TR I AILE Q G V IP LRK++ +A F+K P
Sbjct: 404 TLNSTGIASTRTITAILENFQEPDGTVIIPKVLRKYLEPF---DAAPKDFIKPRP 455
>gi|124028106|ref|YP_001013426.1| seryl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
gi|166222733|sp|A2BM70.1|SYS_HYPBU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|123978800|gb|ABM81081.1| Seryl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
Length = 460
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 199/447 (44%), Gaps = 116/447 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG--------- 65
+P+ ++ + + R + ++D+ D +WR+ + + D N+ ++ I
Sbjct: 12 NPDILKDSMRKRGLDPSVIDEAKRVDEEWRKLKRQVDEIRHRHNVITRQIASARDPEERR 71
Query: 66 -----------------EKMKAKEPVGDSSTLP-GNHLHPSVPVSNNEDENGIVRTKGDT 107
+K+KA E + L N +H SVPV +++EN +R G
Sbjct: 72 KLIEEARRLLAEREELEKKLKALEEERERILLSLPNIVHDSVPVGFSDEENVPIRFWGRP 131
Query: 108 EVRKKY-------------------------SHVDLITMIDGV-DSEAGAIVAGGRGYFL 141
V + + H D++ + + ++ A VAG R Y+L
Sbjct: 132 RVYRGHLDAFKAQTERWGFKVDYELIDWKPVGHADMLEYVLKLGNTMKAAEVAGSRFYYL 191
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
V L L+ YA+ + +KGY + P+ +R +++ V + F + +YKV
Sbjct: 192 FDDIVWLDFALLLYAIDRLTQKGYRLVLPPYMIRHKILMGVIDMETFKDAIYKV------ 245
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
E +D YLIAT+E P+ ++ + + E LPI+ +G+S CFR+E
Sbjct: 246 ---------EDEDLYLIATAEHPLAGLYYNEEIMEDELPIKLVGISPCFRKEAGAGNRDL 296
Query: 254 ----------------------------DLTKS---------IAYRVVNIVSGALNHAAA 276
+L ++ + YRVVN+VSG L AA
Sbjct: 297 KGIFRVHQFHKVEQFVYAKPEESWDILEELIRNAEELFQGLGLPYRVVNVVSGELGAPAA 356
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
KK DLE W P G +RE+VS SN D+QS RL +R + K M K E+VH LN+TA A+T
Sbjct: 357 KKYDLEVWMPAQGKYREMVSASNTTDWQSYRLNIRLVRKKDM--KREYVHTLNSTAIAST 414
Query: 337 RVICAILETHQTETG-VRIPDCLRKFV 362
R I AILE Q G V IP LRK++
Sbjct: 415 RTITAILENFQEPDGTVVIPKVLRKYL 441
>gi|257054210|ref|YP_003132042.1| seryl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
gi|256584082|gb|ACU95215.1| seryl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
Length = 421
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 189/434 (43%), Gaps = 96/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R E P+ VR +Q+ R ++V +VD+++ D + R KADN +
Sbjct: 1 MIDLRTLREE----PDVVRASQRARGEDVGVVDRLLSLDAERRSAIAKADNLRAEQKQLG 56
Query: 62 KVIG--------------------------EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K IG E+ +A E + N +HP VP +
Sbjct: 57 KRIGKASGEEREALLARGKELAAQVKEAEAEQNRASEEFEKLYNVVPNIVHPDVPEGGED 116
Query: 96 DENGIVRTKGDTEVR-KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D + R E H++L + +D+E GA V+G R YFL G LQ+ L+
Sbjct: 117 DYVVLKRVGTPREFDFTPKDHLELGEALGAIDTERGAKVSGARFYFLTGVGAQLQLALLN 176
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A ++ +EKG+ + P +R E+M L E+Y++ DD
Sbjct: 177 MAAAQAVEKGFQLMIPPVLVRPEIMAGTGFLGAHSSEVYRLAD---------------DD 221
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED-------------------- 254
YL+ TSE + H D L ++ P+RY G S+CFR+E
Sbjct: 222 LYLVGTSEVSLAGYHADEILDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVE 281
Query: 255 ------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
L K + YRV++ +G L +AA+K D EAW P
Sbjct: 282 MFIFCRPSEAEAEHEKLLAWEEEMLAKIEVPYRVIDTAAGDLGTSAARKYDCEAWIPTQQ 341
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
A+REL S SNC YQ+R+L VRY + + + + LN T ATTR I AILE HQ
Sbjct: 342 AYRELTSTSNCTTYQARKLSVRY---RDEDGRPQHAATLNGT-LATTRWIVAILENHQQP 397
Query: 350 TG-VRIPDCLRKFV 362
G VR+P+ ++ F+
Sbjct: 398 DGSVRVPEAMQPFL 411
>gi|217967764|ref|YP_002353270.1| seryl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
gi|226701462|sp|B8E0R9.1|SYS_DICTD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|217336863|gb|ACK42656.1| seryl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
Length = 425
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 182/406 (44%), Gaps = 95/406 (23%)
Query: 33 VDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG------------------EKMKA---- 70
VD +IE D K R + + DN +N S+ IG EK++
Sbjct: 30 VDYIIELDAKRRSLQKELDNLRAQRNKISQEIGKHQGEEREKLIKEAKILKEKIEELAKE 89
Query: 71 -----KEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRK--KYSHVDLITMID 123
KE LP N L P P +E +N ++ G+ + H+DL + D
Sbjct: 90 YDNVEKELFSRLWQLP-NFLSPKAPRGKDEKDNVEIKKWGEIKTFNFTPKDHLDLALLND 148
Query: 124 GVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA 183
VD E G+ V G Y+LK AV L+ L + + + +G+ TP R E++ +
Sbjct: 149 LVDFERGSKVTGSNFYYLKNEAVLLEFALFRLVIDTLLPEGFKLFITPDLARMEIIDGIG 208
Query: 184 -QLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIR 242
Q + ++Y+V E D LIAT+E + H+D L E LP++
Sbjct: 209 FQPRGPEAQIYRV---------------EDTDLGLIATAEITLGGYHKDEILDELDLPLK 253
Query: 243 YLGVSTCFRQE---------------DLTKS----------------------------- 258
YLG S CFR E +K+
Sbjct: 254 YLGFSHCFRTEAGAYGRYNRGLYRVHQFSKAEIFIICRPEDSEEMHEYILGLEEKIFQKL 313
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YRV++I SG L AA+K D+EAW PG G F E+ SCSNC DYQ+RRL +R+ ++
Sbjct: 314 EIPYRVLDICSGDLGAPAARKFDIEAWMPGRGEFGEVTSCSNCTDYQARRLNIRF---RR 370
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+ ++E+VHMLN TA A +R + AI E +Q E G + IP L+ ++
Sbjct: 371 VTGEVEYVHMLNGTAIAISRALIAIFENYQQEDGSILIPKALQPYI 416
>gi|271961743|ref|YP_003335939.1| serine--tRNA ligase [Streptosporangium roseum DSM 43021]
gi|270504918|gb|ACZ83196.1| Serine--tRNA ligase [Streptosporangium roseum DSM 43021]
Length = 420
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 185/400 (46%), Gaps = 73/400 (18%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPV 74
D + R+ RF+ + K I + KA ++ K+L ++V + +A++
Sbjct: 33 DLDSRRRGALSRFETLRAEQKSIGKTVSRASGDEKAALLDRAKDLAAQVKSAESEAEKLA 92
Query: 75 GDSS----TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSE 128
G+ T+P N + P + ED+ ++ G+ + H++L ++ +D E
Sbjct: 93 GELDNLLYTVP-NLVEEGAP-AGGEDDFVLIEEVGEKPSFDFEPKDHLELGELLGAIDME 150
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
GA V+G R +FL+G LQ+GL+ A+ + IE G+ P+ P ++ E M+ L +
Sbjct: 151 RGAKVSGSRFFFLRGVGARLQLGLLNMAMQQAIEAGFIPMIPPVLVKPESMKGTGFLGEH 210
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
E+Y + PE DD +L+ TSE P+ A H D L SLP RY G ST
Sbjct: 211 ASEVYHL-----------PE----DDLFLVGTSEVPMAAYHADEILDGGSLPYRYAGWST 255
Query: 249 CFRQE---------------------------------------DLTK------SIAYRV 263
CFR+E D K + YRV
Sbjct: 256 CFRREAGSYGKDTRGIIRVHQFDKVEMFSYTRPEDAHEEHLRLLDWEKEMLAKVELPYRV 315
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIE 323
++I G L +AA+K D EAW P G +RE+ S SNC +Q+RRL VRY + + K +
Sbjct: 316 IDIAGGDLGVSAARKFDCEAWLPTQGQYREVTSTSNCTGFQARRLAVRY---RDKDGKPQ 372
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
V LN T ATTR I AILE HQ G V +P LR +V
Sbjct: 373 HVATLNGT-LATTRWIAAILENHQQADGSVVVPKALRPYV 411
>gi|404446115|ref|ZP_11011237.1| seryl-tRNA ligase [Mycobacterium vaccae ATCC 25954]
gi|403651007|gb|EJZ06179.1| seryl-tRNA ligase [Mycobacterium vaccae ATCC 25954]
Length = 419
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 189/434 (43%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + R +P+ VR +Q R ++ LVD + E D+ R ADN + S
Sbjct: 1 MIDLKVLRE----NPDAVRASQLARGEDPGLVDALAEADVARRAAISAADNLRAEQKAAS 56
Query: 62 KVIGE--------------------------KMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
+++G+ + +A++ + N + VP S E
Sbjct: 57 RLVGKASPEERPALLAAAKELAEKVKAVEAAQSEAEQAYTAAHMAISNVIIDGVP-SGGE 115
Query: 96 DENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ T G+ + H++L + +D E GA V+G R YFL G LQ+GL Q
Sbjct: 116 DDFVVLDTVGEPPALTDPKDHLELGEALGLIDMERGAKVSGSRFYFLTGFGALLQLGLFQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A+ E G+T + P +R E+M L +E+Y+V E DD
Sbjct: 176 LAVRTATENGFTLMVPPVLVRPEIMAGTGFLGAHADEVYRV---------------EADD 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H L + P+RY G S+CFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHSGEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV++I +G L +AA+K D EAW P
Sbjct: 281 GFVYCRPEDAEAEHQRLLGWQRQMLGLIEVPYRVIDIAAGDLGSSAARKYDCEAWVPTQN 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL VRY + N K + LN T ATTR + AILE HQ
Sbjct: 341 TYRELTSTSNCTTFQARRLSVRY---RDENGKPQTAATLNGT-LATTRWLVAILENHQQS 396
Query: 350 TG-VRIPDCLRKFV 362
G VRIP+ L ++
Sbjct: 397 DGSVRIPEALVPYL 410
>gi|170780874|ref|YP_001709206.1| seryl-tRNA synthetase [Clavibacter michiganensis subsp.
sepedonicus]
gi|189083563|sp|B0RCF1.1|SYS_CLAMS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|169155442|emb|CAQ00549.1| seryl-tRNA synthase [Clavibacter michiganensis subsp. sepedonicus]
Length = 426
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 195/433 (45%), Gaps = 104/433 (24%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEP-- 73
P+ V +Q+ R +VE+VD+ + D + RQ + + +N K++ + KA +P
Sbjct: 11 PDLVIASQELRGASVEVVDQAVAADSERRQAITEFEGLRAEQNAHGKLVAKADKADKPRL 70
Query: 74 VGDSSTLPG------------------------NHLHPSVPVSNNEDENGIVRTKG---- 105
+ + L N + VP + ED+ ++R G
Sbjct: 71 IAEVQELKARVTAAQERAQQAEAALDEAMRRIPNIVIDGVP-AGGEDDWALLREVGEKAA 129
Query: 106 -DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKG 164
D E R H+++ ++D +D GA V+G R +FLKG L++ L+ + L++ +E G
Sbjct: 130 FDFEPR---DHLEIGEILDAIDMGRGAKVSGARFHFLKGIGARLEIALMNFGLARALEAG 186
Query: 165 YTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQP 224
PL TP ++ E+M L +E+Y + + DD YL TSE
Sbjct: 187 LVPLITPTLVKPEIMAGTGFLGAHADEVYHL---------------DDDDLYLTGTSEVA 231
Query: 225 ICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------------------- 253
+ H D L A+ PIRY G STC+R+E
Sbjct: 232 LAGYHADEILDLAAGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQKLEMFSYVDPADA 291
Query: 254 ----------------DLTKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
DL +AYRV++ +G L +AA+K D+EAW P GA+REL S
Sbjct: 292 EAEHERLLAMQERMMQDL--GLAYRVIDTAAGDLGSSAARKYDVEAWIPTQGAYRELTST 349
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPD 356
SNC +Q+RRL R+ + + + V LN T ATTR I AILETHQ G VR+P+
Sbjct: 350 SNCTTFQARRLGTRF---RGEDGRTSPVATLNGT-LATTRWIVAILETHQRADGSVRVPE 405
Query: 357 CLRKFVPAVYVNE 369
LR ++ + V E
Sbjct: 406 ALRPYLGGLEVLE 418
>gi|257076767|ref|ZP_05571128.1| seryl-tRNA synthetase [Ferroplasma acidarmanus fer1]
Length = 443
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 192/452 (42%), Gaps = 118/452 (26%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D+ L R++K E+ + + R ++ ++D+ DLKWR+ + + KN+ +
Sbjct: 1 MIDIKLLRSDK----ERFYNSCRARGFDLNILDEFFSLDLKWRENLKILNTYKHDKNIIT 56
Query: 62 KVIGEKMKAKEPV----------------------------GDSSTLPGNHLHPSVPVSN 93
I +K E + + + L N L VP+
Sbjct: 57 ADISSLVKKGENIDNLKLEVEKINKKISLLEEEQNDIESKRNELARLIPNLLAEDVPICK 116
Query: 94 NEDENGIVRTKGDTEV----------------------RKKYSHVDLITMIDGVDSEAGA 131
++ + +VR G+ V +K H L+ + D E
Sbjct: 117 GDENSKLVRYVGNARVFKDDIENFREGSGNSKDYTVIDKKPVDHQTLMEKYNLADIERAG 176
Query: 132 IVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEE 191
+AG R YFLK L++ L+ Y + ++ +T + PF + M + F E
Sbjct: 177 KIAGSRFYFLKNRLFKLELALINYGVDFLSQRNFTVMEPPFMINYASMSGATDIETFKES 236
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
LYK+ G DD YLIAT+E P+ ++ L E+ LP+R GVS CFR
Sbjct: 237 LYKIEG---------------DDLYLIATAEHPLASMLSGEILEESELPLRVSGVSPCFR 281
Query: 252 QE-------------------------------------------DLTKSIA--YRVVNI 266
+E D+ KS+ YR+VNI
Sbjct: 282 REAGAHGRDTKGIFRVHQFNKIEQFIYCRPEESWDFFDELVKNSEDIYKSLGLPYRIVNI 341
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVH 326
SG L AAKK D+E W+P G FRE+VS SN DYQ+R L +RY + K N +F H
Sbjct: 342 CSGDLGSLAAKKYDIEVWYPSQGKFREVVSASNDTDYQARSLNIRY-RAKDGN---KFAH 397
Query: 327 MLNATACATTRVICAILETHQTETGVRIPDCL 358
LN+TA AT RV+ AI+E Q + +++PD L
Sbjct: 398 TLNSTAIATERVLVAIMENFQEDDYIKVPDVL 429
>gi|167043861|gb|ABZ08550.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
[uncultured marine crenarchaeote HF4000_APKG3E18]
Length = 419
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 163/335 (48%), Gaps = 73/335 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIV 133
T+P N LH SVP ++ N +R G D EV+ H+D+ ++ ++ E A
Sbjct: 102 TIP-NVLHKSVPCGDD-SANKEIRKWGTIPQFDFEVK---DHIDISENLNLLELERAAKT 156
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELY 193
AG R Y+L G V L L+Q+ L EKGYT P+ + ++ M+ L F++ +Y
Sbjct: 157 AGARFYYLMGDLVKLNQSLIQFGLDFLSEKGYTMSQPPYMINRKAMEGAVILDDFEDVIY 216
Query: 194 KVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
K+ E D YLI TSE + +++ D L SLP RY +S CFR+E
Sbjct: 217 KI---------------EDQDLYLIGTSEHAMVSMYADEILDGNSLPARYSAISPCFRKE 261
Query: 254 D---------------------------------------LTKS------IAYRVVNIVS 268
+T+ I ++VV + S
Sbjct: 262 AGAHGKDQKGIFRVHQFEKIEQFVFSKPEDSWNEHENMIAITEEFFQKLEIPHKVVLLSS 321
Query: 269 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
G + +AK DLE W G A+RE+VSCSNCLDYQSRRL +R+ K NE +++H L
Sbjct: 322 GDMGKISAKTYDLEVWMAGQNAYREVVSCSNCLDYQSRRLKIRF--RDKTNEDTKYIHTL 379
Query: 329 NATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
N+T AT R + AILE QT+ G V IP+ L+K++
Sbjct: 380 NSTLVATERTMVAILENLQTKDGHVNIPNVLQKYM 414
>gi|383785764|ref|YP_005470333.1| seryl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
gi|383108611|gb|AFG34214.1| seryl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
Length = 426
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 194/439 (44%), Gaps = 100/439 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +PE + + R + E++DK++E D +WR + + +N +N S
Sbjct: 1 MIDLKLLRK----NPELFYEAIRKRNYSTEILDKIVELDREWRNYVNIVNNLKAKRNELS 56
Query: 62 KVI------GEKMKAKEPVGDSSTLPG------------------------NHLHPSVPV 91
K++ G+ +A E + +S L N H SVPV
Sbjct: 57 KIVAKLKAEGKNEEANEIIAESKKLGDEIAQYEAKEKELEDQMYNLALYVPNVPHESVPV 116
Query: 92 SNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+E EN VR G+ K +H DL + +D + GA ++G R + G L+
Sbjct: 117 GKDEAENVEVRRWGEPRKFDFKPKAHWDLGPELGMLDFDRGAKLSGSRFTVMFGEIARLE 176
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L Q+ L + GY + P +++E + QL +F EELY
Sbjct: 177 RALAQFMLDTHTQNGYIEVNVPHLVKRETITATGQLPKFAEELYTC-------------- 222
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ----------------- 252
E DD +LI T+E P+ A+H D L E LPI+Y + C+R+
Sbjct: 223 -ERDDLFLIPTAEVPLAALHIDEILEENQLPIKYTAFTPCYRREAGSYGKDVRGLIRQHQ 281
Query: 253 -------------------EDLTK---------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
E LT+ + YRVV + +G L AAAK D+E W
Sbjct: 282 FEKVELVWYTTPERSFEDLEQLTRDAERILQLLGLPYRVVALCTGDLGFAAAKTYDIEVW 341
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P A++E+ SCSN D+Q+RR +RY + + K+ +VH LN + A R + AI+E
Sbjct: 342 LPSYNAYKEISSCSNDTDFQARRGNMRY---RTKDGKLNYVHTLNGSGLAIGRTLVAIME 398
Query: 345 THQTETG-VRIPDCLRKFV 362
+Q G + +P+ LR ++
Sbjct: 399 NYQNPDGTITVPEVLRPYM 417
>gi|333992783|ref|YP_004525397.1| seryl-tRNA synthetase [Mycobacterium sp. JDM601]
gi|333488751|gb|AEF38143.1| seryl-tRNA synthetase SerS [Mycobacterium sp. JDM601]
Length = 420
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 192/433 (44%), Gaps = 95/433 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP++VR++Q R ++ LVD ++ D R ADN + S
Sbjct: 1 MIDLTLLRE----DPDRVRRSQLGRGEDPALVDALLAADTARRTAISAADNLRAEQKAAS 56
Query: 62 KVIGEKMKAKEPV--------------------GDSSTLPGNHLH-PSVPV----SNNED 96
+ +G + PV +TL G HL P+V + + D
Sbjct: 57 RSVGAASPEERPVLLARAKELAEQVKAAEAAQAEAEATLRGAHLAIPNVVIDGVPAGGVD 116
Query: 97 ENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
+ ++ G+ + H+DL + +D GA V+G R YFL G LQ+GL+Q
Sbjct: 117 DYTVLDVVGEPPAIENPRDHLDLGESLGVIDMGRGAKVSGSRFYFLTGAGALLQLGLLQL 176
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
AL +E G+TP+ TP +R E+M L EE+Y++ E DD
Sbjct: 177 ALRLAVENGFTPMITPALVRPEIMSGTGFLGAHAEEVYRL---------------EADDL 221
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------------- 258
YL+ TSE P+ H D L + P+RY G S+CFR+E +
Sbjct: 222 YLVGTSEVPLAGYHADEILELSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEA 281
Query: 259 ----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
+ YRV+++ +G L +AA+K D EAW P G
Sbjct: 282 FVYCRPAEAEAEHDRLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWVPSQGT 341
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL RY + N K + LN T ATTR + AILE HQ
Sbjct: 342 YRELTSTSNCTTFQARRLATRY---RDDNGKPQTAATLNGT-LATTRWLVAILENHQQPD 397
Query: 351 G-VRIPDCLRKFV 362
G VR+P L +V
Sbjct: 398 GSVRVPAALVPYV 410
>gi|379994283|gb|AFD22768.1| seryl-tRNA synthetase, partial [Collodictyon triciliatum]
Length = 215
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 120/227 (52%), Gaps = 45/227 (19%)
Query: 36 VIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPV--------GDSSTLP------ 81
V+ D +WR+ DNFNK N K + EK KAKE G ++ +
Sbjct: 1 VVALDNEWRKLTFALDNFNKEYNAVQKQVAEKKKAKENADALVAQAKGIAANIEKTKTDV 60
Query: 82 --------------GNHLHPSVPVSNNEDENGIVRTKGDTEVR----KKYSHVDLITMID 123
GN +H SVP S +E NGIVR G + R K Y H +L+ MID
Sbjct: 61 AEAKVKVDRVLNRIGNLVHESVPYSKDEALNGIVREHGTDQRRVNDGKFYHHHELLAMID 120
Query: 124 GVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA 183
D+ G+ VAG RGY+LKG V L L+ Y L IE+GYT L+TPFFM+KE+M E A
Sbjct: 121 AFDTNRGSNVAGHRGYYLKGYGVLLNQALINYGLQFLIERGYTALHTPFFMKKEIMAETA 180
Query: 184 QLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHR 230
QL +FDE LYKV G GE DKYLIATSEQPI A HR
Sbjct: 181 QLEEFDEALYKVSGDGE-------------DKYLIATSEQPISAYHR 214
>gi|116668708|ref|YP_829641.1| seryl-tRNA synthetase [Arthrobacter sp. FB24]
gi|166200597|sp|A0JR71.1|SYS_ARTS2 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|116608817|gb|ABK01541.1| seryl-tRNA synthetase [Arthrobacter sp. FB24]
Length = 426
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 190/432 (43%), Gaps = 98/432 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSK------------ 62
+P+K R +Q+ R + +VD +I D R + +N +N K
Sbjct: 10 NPDKFRASQRARGADESVVDAIISADAARRAALIRFENLRAEQNAFGKKVAQAKGEEKQA 69
Query: 63 ------VIGEKMKAKEPVGDSSTLPGNHLHPSVP-------VSNNEDENGIVRTKGDTEV 109
V+ +KA D + L ++P ED+ +V+T G+
Sbjct: 70 LLAEVKVLAASVKAASAEADVAQAQQEELLRAIPNLIVDGVPEGGEDDYIVVKTVGEPRE 129
Query: 110 RKKY---SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYT 166
+ H+++ +I +D E GA V+G R YFL+G L++ L+Q A+ + I+ G+
Sbjct: 130 FPDFEPKDHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALLQMAMEQAIDAGFI 189
Query: 167 PLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPIC 226
P+ TP +R E MQ + D E+Y++ DD YL+ TSE +
Sbjct: 190 PMITPTLVRPETMQGTGFDVKHDAEIYRLAE---------------DDLYLVGTSEVALA 234
Query: 227 AVHRDSWLPEASLPIRYLGVSTCFRQED-------------------------------- 254
H D L ++ PIRY G S+C+R+E
Sbjct: 235 GYHADEILDLSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAA 294
Query: 255 ------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCL 301
L K + YRV++ +G L ++AA+K D EAW P GA+REL S SNC
Sbjct: 295 EHERLLAWEEEMLAKCELPYRVIDTAAGDLGNSAARKFDCEAWVPTQGAYRELTSTSNCT 354
Query: 302 DYQSRRLLVRYGQTKKMNEK-----IEFVHMLNATACATTRVICAILETHQTETG-VRIP 355
+Q+RRL +R + +NE V LN T ATTR I AILE HQ E G V +P
Sbjct: 355 TFQARRLNIR---ERVLNEDGAPKGTRAVATLNGT-LATTRWIVAILEHHQNEDGSVNVP 410
Query: 356 DCLRKFVPAVYV 367
L+K++ + V
Sbjct: 411 RALQKYLGGLEV 422
>gi|291005181|ref|ZP_06563154.1| seryl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
Length = 421
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 189/438 (43%), Gaps = 104/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R DPE VR +Q+ R ++ +VD ++ D + R +AD+ +
Sbjct: 1 MIDLKTLRE----DPEAVRASQRARGEDASVVDALLSADERRRSAVSRADSLRAEQKQLG 56
Query: 62 KVIG--------------------------EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K +G E+ +A + + ++ N + P VP E
Sbjct: 57 KQVGKAAGEEREHLLKKAKELSAQVKDAEAEQAEADQALVEAQKKLSNIVGPGVP-PGGE 115
Query: 96 DENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +++ G D EV+ H++L T + +D E GA VAG R YFL G L++
Sbjct: 116 DDYAVLKHVGVPPEFDFEVK---DHLELGTSLGAMDMERGAKVAGARFYFLTGIGAQLEL 172
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A + G+T + P +R E+M+ L E+Y++
Sbjct: 173 ALLNMAAAHATANGFTLVVPPVLVRPEIMEGTGFLGAHSSEVYRL--------------- 217
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
E DD YL+ TSE P+ H + + P+RY G S+CFR+E
Sbjct: 218 EEDDLYLVGTSEVPLAGYHSGEIIDLGAGPLRYAGWSSCFRREAGSYGRDTRGIIRVHQF 277
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
L K + YRV++ +G L +AA+K D EAW
Sbjct: 278 NKLEMFVYCREEDAVAEHERLLGWEEEMLAKIEVPYRVIDTAAGDLGASAARKYDCEAWI 337
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +REL S SNC +Q+RRL RY ++ + LN T ATTR I AILE
Sbjct: 338 PSQQTYRELTSTSNCTTFQARRLNTRY---READGPTRIAATLNGT-LATTRWIVAILEN 393
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P+ LR F+
Sbjct: 394 HQQADGSVRVPEALRPFL 411
>gi|167044044|gb|ABZ08729.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
[uncultured marine crenarchaeote HF4000_APKG4H17]
Length = 419
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 160/335 (47%), Gaps = 73/335 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIV 133
T+P N LH SVP +N N +R G D EV+ H+D+ ++ ++ E A
Sbjct: 102 TIP-NVLHESVPRGDN-SANKEIREWGTIPQFDFEVK---DHIDISESLNLLELERAAKT 156
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELY 193
AG R Y+LK V L L+Q+ L EKGYT P+ + ++ M+ L F++ +Y
Sbjct: 157 AGARFYYLKDDLVKLNQSLIQFGLDFLSEKGYTLSQPPYMINRKAMEGAVILDDFEDVIY 216
Query: 194 KVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
K+ E D YLI TSE + +++ D L SLP+RY +S CFR+E
Sbjct: 217 KI---------------EDQDLYLIGTSEHAMVSMYADEILDGNSLPVRYAAISPCFRKE 261
Query: 254 -----------------------------DLTKS----------------IAYRVVNIVS 268
D K I ++VV + S
Sbjct: 262 AGAHGKDQKGIFRVHQFEKIEQFVFSKPEDSWKEHENMIGVTEEFFQKLEIPHKVVLLSS 321
Query: 269 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
+ +AK DLE W G A+RE VSCSNCLDYQSRRL +R+ K NE ++ H L
Sbjct: 322 SDMGKISAKTYDLEVWMAGQNAYREAVSCSNCLDYQSRRLKIRF--RDKTNEDTQYAHTL 379
Query: 329 NATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
N+T AT R + AI+E QT+ G V IP+ L+K++
Sbjct: 380 NSTLVATERTMVAIIENFQTKDGHVNIPNVLQKYM 414
>gi|206901603|ref|YP_002251096.1| seryl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
gi|238065098|sp|B5YEY8.1|SYS_DICT6 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|206740706|gb|ACI19764.1| seryl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
Length = 425
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 184/406 (45%), Gaps = 95/406 (23%)
Query: 33 VDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKM--KAKEPVGDSST----------- 79
VD ++E D K R + + D +N S+ IG++ + +E + + T
Sbjct: 30 VDYILELDAKRRSLQKELDTLKAQRNKISQEIGKRKGEEREELIKKAKTLKEKIEELEKE 89
Query: 80 --------------LPGNHLHPSVPVSNNEDENGIVRTKGD--TEVRKKYSHVDLITMID 123
LP N L P P +E +N ++ G+ T H+DL + D
Sbjct: 90 YEKIEKELYLKLWQLP-NFLSPKAPKGKDEKDNIEIKRWGNIKTFTFTPKDHLDLALLND 148
Query: 124 GVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA 183
VD E G+ V G Y+LK AV L+ L + + + +G+ TP R E++ +
Sbjct: 149 LVDFERGSKVTGSNFYYLKNEAVLLEFALFRLVIDTLLPEGFKLFITPDLARMEIIDGIG 208
Query: 184 -QLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIR 242
Q + ++Y+V E D LIAT+E + H+D L E LP++
Sbjct: 209 FQPRGPEAQIYRV---------------EDTDLGLIATAEITLGGYHKDEILDELDLPLK 253
Query: 243 YLGVSTCFRQE---------------DLTKS----------------------------- 258
YLG S CFR E +K+
Sbjct: 254 YLGFSHCFRTEAGAYGRYNRGLYRVHQFSKAEIFIICRPEDSEEMHEYILSLEEKIFQKL 313
Query: 259 -IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
I YRVV+I SG L AA+K D+EAW PG G F E+ SCSNC DYQ+RRL +R+ ++
Sbjct: 314 EIPYRVVDICSGDLGAPAARKFDIEAWMPGRGDFGEVTSCSNCTDYQARRLNIRF---RR 370
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+ ++E+VHMLN TA A +R + AILE +Q E G + IP L+ ++
Sbjct: 371 VTGEVEYVHMLNGTAIAISRALIAILENYQQEDGSILIPKVLQPYI 416
>gi|88856638|ref|ZP_01131294.1| seryl-tRNA synthetase [marine actinobacterium PHSC20C1]
gi|88814099|gb|EAR23965.1| seryl-tRNA synthetase [marine actinobacterium PHSC20C1]
Length = 421
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 191/432 (44%), Gaps = 100/432 (23%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQ-------FRHKADNFNK------------ 55
+PE VR++Q R +V+LVD I D K R R + ++F K
Sbjct: 10 NPEAVRQSQIARGASVQLVDDAIAADQKRRASIGEFEALRAEQNSFGKQVAQAPPEEKKA 69
Query: 56 ----FKNLCSKVIGEKMKAKEPVGDSSTLPG---NHLHPSVPVSNNEDENGIVRTKG--- 105
+ L ++V + + E D + + G N VPV ED+ +VR G
Sbjct: 70 LVAEAQKLAARVKAAQSVSAEAEADFTRIVGAIGNIAVDGVPV-GGEDDWELVREVGTPA 128
Query: 106 --DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
D E R H DL ++ +D G V+G R YFLKG L++GL+ AL + I
Sbjct: 129 SFDFEPR---DHADLGEILGAIDIPRGVKVSGSRFYFLKGVGARLELGLMNMALDRAIAG 185
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
+ PL TP +R E+M L + +E+Y + DEL YL TSE
Sbjct: 186 DFIPLITPTLVRPEIMAGTGFLGEHSDEVYYL------------PADEL---YLTGTSEV 230
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFR-------------------------------- 251
+ H D L + +RY G STC+R
Sbjct: 231 ALAGYHSDEILDLSKGALRYAGWSTCYRREAGSAGKDNRGILRVHQFNKLEMFSYVLPEN 290
Query: 252 -----------QEDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
QE + ++ ++YRV+++ G L +AA+K D+EAW P GA+REL S S
Sbjct: 291 ALEEHERLLAFQESMLQACELSYRVIDVAGGDLGSSAARKFDIEAWVPTQGAYRELTSTS 350
Query: 299 NCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDC 357
NC YQ+RRL +RY + K V LN T ATTR + AILETHQ G V +P
Sbjct: 351 NCTTYQARRLDIRY---RTETGKTAPVATLNGT-LATTRWLVAILETHQQPDGSVVVPQA 406
Query: 358 LRKFVPAVYVNE 369
LR ++ + V E
Sbjct: 407 LRPYLGGLEVLE 418
>gi|444434107|ref|ZP_21229232.1| serine--tRNA ligase [Gordonia soli NBRC 108243]
gi|443885034|dbj|GAC70953.1| serine--tRNA ligase [Gordonia soli NBRC 108243]
Length = 418
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 187/433 (43%), Gaps = 95/433 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + R DP+ VR +Q++R ++ LVD ++E D R +AD+ +
Sbjct: 1 MIDLKILRE----DPDLVRASQRNRGEDPGLVDTLLEADATRRAAIVEADSLRSEQKGLG 56
Query: 62 KVIG------------------EKMKAKEPVGDSSTLPGNHLHPSV-------PVSNNED 96
K++G E++KA S+ H ++ + ED
Sbjct: 57 KLVGKAQGDEKQELLGKGKQLAEQVKAAVARQSSADEAAQAAHRAISNIVADGAPAGGED 116
Query: 97 ENGIVRTKGDTE-VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
+ ++ G+ + H++L + +D E GA V+G R YFL GP LQ+GL+
Sbjct: 117 DYVVLEHVGEPRAIDDPKDHLELGESLGLIDMERGAKVSGSRFYFLTGPGALLQLGLLNM 176
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
A K + G++ + P +R EVM L E+Y + E DD
Sbjct: 177 AAQKAVANGFSLMIPPVLVRPEVMGGTGFLGSHAAEVYHL---------------EEDDL 221
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------------- 258
YL+ TSE P+ H D + + P RY G S+CFR+E +
Sbjct: 222 YLVGTSEVPLAGYHMDEIIDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKIEG 281
Query: 259 ----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
+ YRV+++ G L +AA+K D EAW P
Sbjct: 282 FVYCRPEDAEAEHQRLLGWEKEMLGAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQNT 341
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL +RY + N K + LN T ATTR I AILE HQ
Sbjct: 342 YRELTSTSNCTTFQARRLSIRY---RDENGKPQTAATLNGT-LATTRWIVAILENHQQPD 397
Query: 351 G-VRIPDCLRKFV 362
G VR+P L +FV
Sbjct: 398 GSVRLPAELARFV 410
>gi|118431671|ref|NP_148300.2| seryl-tRNA synthetase [Aeropyrum pernix K1]
gi|152031700|sp|Q9YAG3.2|SYS_AERPE RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|116062994|dbj|BAA80986.2| seryl-tRNA synthetase [Aeropyrum pernix K1]
Length = 460
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 198/457 (43%), Gaps = 121/457 (26%)
Query: 5 LDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI 64
L+L R+ +PE ++++ + R + +VD+ D++WR+ + + N +++I
Sbjct: 7 LELLRS----NPEALKEHVRKRLMDPAIVDRAYRLDVEWRRLLTMVNEVRRRHNEITRMI 62
Query: 65 G--------------------------EKMKAKEPVGDSSTLP-GNHLHPSVPVSNNEDE 97
EK+K E + + L N + P VPV +E
Sbjct: 63 AKAGSREERERLIAEAKRLLREREDLEEKLKKVEREREEALLGLPNIVAPDVPV-GDESA 121
Query: 98 NGIVRTKGDTEVRKKY-------------------------SHVDLITMIDGV-DSEAGA 131
+ G +V K + H D++ + + D+ A
Sbjct: 122 TRPIEFWGKPKVWKGHVDAFREQTEAYGFKVDHEVIEWRPRGHADMMEEVLKLGDTLRAA 181
Query: 132 IVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEE 191
VAG R Y+L V L + L+ YA+ KGY + P+ +R VM V L F +
Sbjct: 182 RVAGSRFYYLFEDLVFLDLALLMYAIDFMTSKGYVLVLPPYMLRYNVMSRVIDLETFKDA 241
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
+Y++ G +D YLIAT+E P+ A++ +S + + LP++ +GVS CFR
Sbjct: 242 IYEIAG---------------EDLYLIATAEHPLAALYYNSEIYDEDLPLKLVGVSPCFR 286
Query: 252 QE------DLTK---------------------------------------SIAYRVVNI 266
+E DL I +RVVNI
Sbjct: 287 KEAGAGNRDLKGIFRVHQFHKVEQFVYSLPEESSKLHEELISNAKEIFKGLEIPFRVVNI 346
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVH 326
SG L A KK DLEAW P G +RE+VS SNC D+Q+ RL +R + K M +VH
Sbjct: 347 ASGDLGACAVKKYDLEAWMPAQGKYREMVSASNCTDWQAYRLGIRLVRRKGMERG--YVH 404
Query: 327 MLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LNATA A+TR I AILE Q E G V IP LR+++
Sbjct: 405 TLNATAVASTRTITAILENFQDEEGVVAIPRALRRYL 441
>gi|78485113|ref|YP_391038.1| seryl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
gi|123755256|sp|Q31HK9.1|SYS_THICR RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|78363399|gb|ABB41364.1| seryl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
Length = 428
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 66/337 (19%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGR 137
N H S PV N+ED+N VR G D +++ HVDL D++A +A R
Sbjct: 105 NLPHDSTPVGNSEDDNVEVRQWGTPKTFDFDIK---DHVDLAEARGWYDNDAAVKIASSR 161
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
LKGP LQ L Q+ L + GY +Y PF + ++ + QL +F+ +LYK+
Sbjct: 162 FSVLKGPMAKLQRALTQFMLDSHTDAGYEEVYVPFLVNQDSLHGTGQLPKFEADLYKI-- 219
Query: 198 KGEKVGDSAPEKDELD-DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---- 252
D E D D D YLI T+E P+ + RD + E +LP+++ + CFR
Sbjct: 220 ------DKHEEHDTSDRDLYLIPTAEVPVTNLFRDEIIDEDTLPLKFTAHTPCFRSEAGS 273
Query: 253 --------------------------------EDLTKS---------IAYRVVNIVSGAL 271
E LT+ + YRV+++ +G +
Sbjct: 274 YGRDTKGLIRQHQFEKVEMVQIVHPDQSYEALESLTQQAESILQKLELPYRVMSLCTGDI 333
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
+AAK DLE W PG A+RE+ SCSN D+Q+RRL R+ +K +K + H LN +
Sbjct: 334 GFSAAKTYDLEVWLPGQQAYREISSCSNFEDFQARRLKARF---RKGQDKPQLAHTLNGS 390
Query: 332 ACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
A R + A+LE +Q G + +P LR ++ V +
Sbjct: 391 GLAVGRTLVAVLENYQNADGSITVPTALRSYLGGVEI 427
>gi|50954101|ref|YP_061389.1| seryl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|81826708|sp|Q6AH61.1|SYS_LEIXX RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|50950583|gb|AAT88284.1| seryl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 421
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 194/428 (45%), Gaps = 95/428 (22%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGE--KMKAKEP 73
P+ +R++Q+ R +V+LVD+ ++ D++ R + +N K + + K + KE
Sbjct: 11 PDVLRRSQEARGDSVQLVDEALQVDIERRAAITAFEELRAEQNAFGKRVAQAPKQEKKEL 70
Query: 74 VGDSSTLPG------------------------NHLHPSVPVSNNEDENGIVRTKGDTEV 109
V + L G N + VP S ED+ +++ G
Sbjct: 71 VAQAQQLAGRVKEAQQVAAAAEARFESVLRKIGNPVVAGVP-SGGEDDYAVLKEVGGIPA 129
Query: 110 R--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTP 167
+ H+ L ++ +D GA V+G R FL+G L++ L+ AL K + G+ P
Sbjct: 130 FGFEPRDHLALGELLGAIDMARGAKVSGARFSFLRGLGARLEIALMNLALDKALANGFVP 189
Query: 168 LYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICA 227
L TP ++ EVMQ L + +E+Y + E DD YL TSE +
Sbjct: 190 LITPTLVKPEVMQGTGFLGEHSDEVYHL---------------ETDDLYLTGTSEVALAG 234
Query: 228 VHRDSWLPEASLPIRYLGVSTCFR------------------------------------ 251
H D L + + P+RY G STC+R
Sbjct: 235 YHADEIL-DVTEPLRYAGWSTCYRREAGSAGKDTRGIIRVHQFTKLEMFVYTLPEHAEAE 293
Query: 252 -------QEDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLD 302
QE++ ++ ++YRV++ +G L +AA+K D+EAW P G +REL S SNC
Sbjct: 294 HARLLAWQEEMMQALGLSYRVIDTAAGDLGSSAARKYDVEAWIPTQGRYRELTSTSNCGT 353
Query: 303 YQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
+Q+RRL RY + + K V LN T ATTR I AILETHQ E G V +P+ LR +
Sbjct: 354 FQARRLETRY---RTESGKTAPVATLNGT-LATTRWIVAILETHQREDGSVLVPETLRPY 409
Query: 362 VPAVYVNE 369
+ + + E
Sbjct: 410 LGGLEILE 417
>gi|307596091|ref|YP_003902408.1| seryl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
gi|307551292|gb|ADN51357.1| seryl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
Length = 468
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 200/447 (44%), Gaps = 119/447 (26%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG-------EK- 67
P+ VR + + R ++ +VDK IE D KWR + + D N+ +K + EK
Sbjct: 13 PDIVRDSLRKRRMDISIVDKFIELDNKWRSLKAEIDELRHRHNVITKEVSKLSGAEREKK 72
Query: 68 -MKAKEPVGDSS------------------TLPGNHLHPSVPVSNNEDENGI-VRTKGDT 107
M+AKE + + ++P N +H SVP + E + I +R G
Sbjct: 73 IMEAKELLSEIQKKEKELDSIEKERERVLRSIP-NLVHESVPYNCPEGVDSIPIRFYGTP 131
Query: 108 EVR-------------------------KKYSHVDLITMIDGV-DSEAGAIVAGGRGYFL 141
+V K H D++ ++ G+ D+ VAG R Y+L
Sbjct: 132 KVWVGHIKEFKDQTERFGFNVPYETIDWKPIGHADMLEIVLGMGDTLKAGEVAGSRFYYL 191
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
V L + L+ YA+ +KG+ + P+ ++ EV+ E+ + F + +YKV
Sbjct: 192 FDDLVMLDMALIAYAIDYMTKKGFRLVLPPYMLKYEVLSEILDMETFKDMVYKV------ 245
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
E +D YLI T+E PI A R L E LP+ ++GVS FR+E
Sbjct: 246 ---------ENEDLYLIGTAEHPIAAYLRRMELLEDQLPLLFVGVSPSFRREASAGNRDM 296
Query: 254 ----------------------------DLTKS---------IAYRVVNIVSGALNHAAA 276
+L ++ + YRVV + + + AA
Sbjct: 297 KGIFRVHQFHKVEQFVFSLPEESWRWHEELIRNAEELWQGLGLPYRVVVLCAHDMGRCAA 356
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
K+ DLE W P G +RE+VSCSNC D+QS +L +R + + + EFVH LN+TA A+T
Sbjct: 357 KQYDLEVWMPAQGMYREMVSCSNCTDWQSAKLGIR---VLRRDMRREFVHTLNSTAIAST 413
Query: 337 RVICAILETHQTETG-VRIPDCLRKFV 362
R I AILE +Q G V IP LRK++
Sbjct: 414 RAITAILENYQEPDGTVVIPKVLRKYL 440
>gi|335040875|ref|ZP_08533995.1| Seryl-tRNA synthetase [Caldalkalibacillus thermarum TA2.A1]
gi|334179179|gb|EGL81824.1| Seryl-tRNA synthetase [Caldalkalibacillus thermarum TA2.A1]
Length = 424
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 160/336 (47%), Gaps = 73/336 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIV 133
+LP N H SVPV +E+EN +VRT G D E + H ++ + VD+EAG V
Sbjct: 103 SLP-NVPHESVPVGASEEENRLVRTWGQKPEWDFEPK---PHWEIAENLGIVDTEAGGKV 158
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
AG R FLKG L+ L+ + L I E GY ++ PF + ++ M QL +F+E+
Sbjct: 159 AGSRFLFLKGEGAQLERALINFMLDLHIHEHGYEEMWPPFMVHRDSMTGTGQLPKFEEDA 218
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
+KV D+ D +LI T+E P+ HRD L LP Y S CFR
Sbjct: 219 FKV-------ADT--------DFFLIPTAEVPVTNYHRDQILTLEELPKAYAAYSACFRS 263
Query: 253 ---------------------------------EDLTKSIA------------YRVVNIV 267
E+L K A YRV+ +
Sbjct: 264 EAGAAGRDTRGLIRLHQFNKVELVRFVKPEDSYEELEKLTAHAEKILQLLGLPYRVMEMC 323
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G L AAKK DLE W P + +RE+ SCSN D+Q+RR +R+ + K K E+VH
Sbjct: 324 TGDLGFTAAKKYDLEVWLPAADTYREISSCSNFEDFQARRANIRFRREPKA--KPEYVHT 381
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R + AILE +Q + G VRIP+ LR ++
Sbjct: 382 LNGSGLAIGRTMAAILENYQEQDGRVRIPEVLRSYM 417
>gi|441518379|ref|ZP_21000102.1| serine--tRNA ligase [Gordonia hirsuta DSM 44140 = NBRC 16056]
gi|441454782|dbj|GAC58063.1| serine--tRNA ligase [Gordonia hirsuta DSM 44140 = NBRC 16056]
Length = 418
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 185/433 (42%), Gaps = 95/433 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + R +PE VR +Q+ R ++ ELVD++++ D R +AD +
Sbjct: 1 MIDLKIVRE----NPELVRDSQRARGEDPELVDRLLDADAVRRTAIGEADALRAEQKGLG 56
Query: 62 KVIG------------------EKMKAKEPVGDSSTLPGNHLH--------PSVPVSNNE 95
K +G E++KA + + +H + P P +
Sbjct: 57 KQVGKASGEEKAALLARGKDLAEQVKAAVARQNEAAQTFDHAYRAISNIIAPQTPPGGED 116
Query: 96 DENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
D + E+ H++L + +D E GA V+G R YFL GP LQ+GL+
Sbjct: 117 DFVVLEHVGTPREIADPRDHLELSESLGLIDMERGAKVSGSRFYFLTGPGAMLQLGLLNM 176
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
A +K GYT + P +R EVM L E+Y++ E DD
Sbjct: 177 AAAKATAAGYTMMIPPVLVRPEVMSGTGFLGAHAAEVYRL---------------EEDDL 221
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------- 253
YL+ TSE P+ H D L + P RY G S+CFR+E
Sbjct: 222 YLVGTSEVPLAGYHSDEILDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEG 281
Query: 254 -----------------DLTKS------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
D KS + YRV+++ +G L +AA+K D EAW P
Sbjct: 282 FVYCKPEDAEAEHQRLLDFEKSMLAAIDVPYRVIDVAAGDLGSSAARKFDCEAWVPSQNT 341
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL RY + N K + LN T ATTR + AILE HQ
Sbjct: 342 YRELTSTSNCTTFQARRLATRY---RDENGKPQTAATLNGT-LATTRWLVAILENHQQPD 397
Query: 351 G-VRIPDCLRKFV 362
G V +PD L F
Sbjct: 398 GSVILPDELATFT 410
>gi|406905620|gb|EKD47034.1| hypothetical protein ACD_66C00250G0003 [uncultured bacterium]
Length = 423
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 157/325 (48%), Gaps = 67/325 (20%)
Query: 87 PSVPVSNNEDENGIVRTKGDTEVRK--KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
P V ++ NE EN I++T G+ H++L ++ +D++ A V+G R + G
Sbjct: 107 PDVKIAKNESENEIIKTIGEIPSFNFTPKDHLELGDILGIIDTQRAANVSGARFNYFIGD 166
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQ-FDEELYKVIGKGEKVG 203
V L+ L+Q+AL+ E G+TP+ TP ++ + M+ + L +E+Y +
Sbjct: 167 GVLLEFALIQFALATLSEYGFTPVITPHMIKPQAMRAMGYLEHGGHDEIYYL-------- 218
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------ 251
KD L YLI T+EQ + A+H D L LPIRY+G S C+R
Sbjct: 219 ----PKDNL---YLIGTAEQSVGAMHMDEILDGTKLPIRYVGFSPCYRREAGSYGKDTRG 271
Query: 252 -------------------------------QEDLTKS--IAYRVVNIVSGALNHAAAKK 278
+E L +S I Y++V +V+G L AA+K
Sbjct: 272 ILRVHQFDKIEMFTFSTPEDSDAEHSLILEIEERLMQSLKIPYQLVKMVTGDLGLPAARK 331
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
D+EAW P A+RE SCS+C D+Q+RRL RY K + K FVH LN T A R
Sbjct: 332 YDIEAWMPAQDAYRETHSCSSCTDFQARRLNTRY---KDDSGKTHFVHTLNGTGFAIGRT 388
Query: 339 ICAILETHQTETG-VRIPDCLRKFV 362
I ILE Q E G V IP+ LR F+
Sbjct: 389 IITILENFQQEDGSVIIPEVLRPFM 413
>gi|119872042|ref|YP_930049.1| seryl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
gi|166223276|sp|A1RRX4.1|SYS_PYRIL RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|119673450|gb|ABL87706.1| seryl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
Length = 448
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 186/443 (41%), Gaps = 110/443 (24%)
Query: 14 GDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKM----- 68
+P+ V+K R + LVDK +E D KWRQ + + D N SK G K
Sbjct: 11 NNPDYVKKVLTARRLDTSLVDKFLELDKKWRQLKKEVDELRHVYNQLSKE-GAKAPPERR 69
Query: 69 -----KAKEPVGDSSTLPG-----------------NHLHPSVPVSNNEDENGIVRTKGD 106
KA+E L N +H SVP+ ++ VR G
Sbjct: 70 REIVEKARELAAKLENLEKEVEKIEREREDLLWSFPNLIHDSVPICPEGVDSIPVRYGGV 129
Query: 107 TEVRKK-----------------YSHVDLITMIDG-VDSEAGAIVAGGRGYFLKGPAVCL 148
+V K H D+ ++ G VD+ VAG R Y+L V L
Sbjct: 130 VKVAKDAVGTLKDVEYVIVDKLPIGHADMAEVVLGMVDTLKAGEVAGSRFYYLLDDLVWL 189
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
L YA+ + +KG+ P+ P+ ++ +V++ V F + +YK+ G
Sbjct: 190 DFALAMYAMDRLAQKGFRPIIPPYMLKFDVIKRVLDFDTFRDAIYKIEG----------- 238
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
+D YLIAT+E I A L E LP+ ++G S CFR+E
Sbjct: 239 ----EDLYLIATAEHGIAAYLYKRELVEDELPLLFVGWSPCFRKEAGAGSRDLKGIFRVH 294
Query: 254 ---------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEA 283
++TK+ + YRVVNI + L AAKK D+E
Sbjct: 295 IFHKVEQFVFSLPEDSWRWHEEITKNTEELIKDLGLPYRVVNICAHDLGAPAAKKYDIEV 354
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
W+P +REL SCSN D+QS RL +R + + EFVH LN T ATTR I AIL
Sbjct: 355 WYPAQSMYRELASCSNVTDWQSYRLGIR---VTRKGMRREFVHTLNCTGLATTRTITAIL 411
Query: 344 ETHQTETG-VRIPDCLRKFVPAV 365
E Q E G V IP LR ++ +
Sbjct: 412 ENFQREDGVVEIPKVLRPYLEPI 434
>gi|449437300|ref|XP_004136430.1| PREDICTED: serine--tRNA ligase-like [Cucumis sativus]
Length = 539
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 170/342 (49%), Gaps = 81/342 (23%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N HP VP+ ED + I + G +++S H++L +D D +A A V+G +
Sbjct: 206 NTTHPDVPI-GGEDCSIIRKMVGSP---REFSFPVKDHLELGKQLDIFDFDAAAEVSGSK 261
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEELYKVI 196
Y+LK AV L++GL+ + LS+ +++G+TPL TP +R V+++ Q + ++Y +
Sbjct: 262 FYYLKNAAVTLELGLINWTLSEVMKRGFTPLITPEIVRSTVVEKCGFQPRGENTQVYSIE 321
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR----- 251
G D+ LI T+E P+ +H DS L E+SLP++Y+ S CFR
Sbjct: 322 G---------------SDQCLIGTAEIPVGGIHMDSILSESSLPLKYVAYSHCFRTEAGA 366
Query: 252 --------------------------------------QEDLTKSIA--YRVVNIVSGAL 271
+EDL S+ ++ +++ S L
Sbjct: 367 AGAATRGLYRVHQFSKVEMFIFCRPEESESYHEELIRIEEDLFSSLGLHFKTLDMASADL 426
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKI--------- 322
A +K D+EAW PG G + E+ S SNC DYQSRRL +RY +++ +
Sbjct: 427 GAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQEQVPSTLKKGKGNLAP 486
Query: 323 -EFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+FVH LNATACA R++ +LE +Q E G V IP+ LR F+
Sbjct: 487 TQFVHTLNATACAVPRMMVCLLENYQQEDGSVIIPEPLRPFM 528
>gi|327311812|ref|YP_004338709.1| seryl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
gi|326948291|gb|AEA13397.1| seryl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
Length = 453
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 189/446 (42%), Gaps = 116/446 (26%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS-----------KVI 64
P+ VRK R +V LVD+ ++ D KWR+ + + D N+ S K I
Sbjct: 13 PDVVRKTLVARRMDVTLVDRFLDLDSKWRELKREIDELRHQHNVLSREASKAPPQDRKTI 72
Query: 65 GEKMKAKEPVGDSSTLPG-----------------NHLHPSVPVSNNEDENGIVRTKGDT 107
EK AKE + L N +H SVPV ++ VR G
Sbjct: 73 AEK--AKELIEKIKGLEDQLKAVEMERERLLFSFPNLIHESVPVCPEGVDSIPVRYWGTI 130
Query: 108 EV-------------RKKYSHVDLI---------TMIDGVDSEAGAIVAGGRGYFLKGPA 145
+V R +Y VD ++ VD+ VAG R Y++
Sbjct: 131 KVAREDLEKVLRLDPRPEYVVVDKAPVGHADEAENVLKMVDTLKAGEVAGSRFYYMLDDL 190
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
V L L YAL KG+ P+ P+ ++ +V++ V L F + +YK+
Sbjct: 191 VWLDFALSLYALEHLTSKGFRPIVPPYMLKYDVIRRVIDLDTFKDAIYKL---------- 240
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
E +D YLIAT+E I A L E LP Y+G S CFR+E
Sbjct: 241 -----ENEDLYLIATAEHGIAAYLYGRDLLEEELPQLYVGWSPCFRREAGAGSRDIKGIF 295
Query: 254 ------------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLD 280
++TK+ + YRVVNI + L AAKK D
Sbjct: 296 RVHIFHKVEQFVFSLAEESWTWHEEITKNTEELMQGLGLPYRVVNICAHDLGAPAAKKYD 355
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
+E W+P G +REL SCSN D+QS RL +R + K E+VH LN T ATTR I
Sbjct: 356 VEVWYPAQGTYRELASCSNVTDWQSYRLGIR---VTRRGMKREYVHTLNCTGLATTRTIT 412
Query: 341 AILETHQTETG-VRIPDCLRKFVPAV 365
AILE +Q E G V IP LRK++ +
Sbjct: 413 AILENYQREDGAVEIPKVLRKYLEPI 438
>gi|383759384|ref|YP_005438369.1| seryl-tRNA synthetase SerS [Rubrivivax gelatinosus IL144]
gi|381380053|dbj|BAL96870.1| seryl-tRNA synthetase SerS [Rubrivivax gelatinosus IL144]
Length = 430
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 155/324 (47%), Gaps = 62/324 (19%)
Query: 88 SVPVSNNEDENGIVRTKGDTEVRK--KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
SVPV +E N VR G + HVD+ + G+D + GA +AG R FL+GPA
Sbjct: 113 SVPVGADESGNVEVRRWGTPRTFEFTPKDHVDVGQAL-GLDFDTGAKLAGSRFTFLRGPA 171
Query: 146 VCLQVGLVQYAL-SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
L L Q+ L ++ E GYT +TP+ + +EV++ QL +F E+++ V+ G+
Sbjct: 172 ARLHRALAQFMLDTQTQEHGYTECWTPYIVNREVLEGTGQLPKFKEDMFWVLRGGD---- 227
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------ 258
+E ++YLI+TSE P+ R+ L A+LPI+ S CFR E +
Sbjct: 228 -----EEQREQYLISTSEIPLTNTVREQILDAAALPIKLTAHSPCFRSEAGSAGRDTRGM 282
Query: 259 ---------------------------------------IAYRVVNIVSGALNHAAAKKL 279
+ YRV+ + +G + +AK
Sbjct: 283 IRQHQFDKVEMVQIVRPEDSDAALEQMVGHAEAILQKLELPYRVITLCTGDMGFGSAKTY 342
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLE W P G +RE+ SCSNC +Q+RR+ R+ + K EFVH LN + A R +
Sbjct: 343 DLEVWLPAQGTYREISSCSNCEAFQARRMQARF---RNAQGKTEFVHTLNGSGLAVGRAL 399
Query: 340 CAILETHQTETG-VRIPDCLRKFV 362
A+LE HQ G +R+P LR ++
Sbjct: 400 VAVLENHQQADGSIRVPAALRPYL 423
>gi|400976222|ref|ZP_10803453.1| seryl-tRNA ligase [Salinibacterium sp. PAMC 21357]
Length = 421
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 191/432 (44%), Gaps = 100/432 (23%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWR-------QFRHKADNFNK------------ 55
+P+ VR++Q R +V+LVD I D R R + ++F K
Sbjct: 10 NPDAVRQSQIARGSSVQLVDDAIAADQNRRASIGEFESLRAEQNSFGKKVAQAPSEEKKA 69
Query: 56 ----FKNLCSKVIGEKMKAKEPVGDSSTLPG---NHLHPSVPVSNNEDENGIVRTKG--- 105
+ L ++V ++ + E + + + G N VPV ED+ +VR G
Sbjct: 70 LVAEAQKLSARVKAAQLVSAEAEAEFTRIVGAIGNIAVEGVPV-GGEDDWELVREVGTPK 128
Query: 106 --DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
D E R H DL ++ +D G V+G R YFLKG L++GL+ AL + I
Sbjct: 129 KFDFEPR---DHADLGEILGAIDIPRGVKVSGSRFYFLKGVGARLEIGLMNMALDRAIAG 185
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
+ PL TP +R E+M L + +E+Y + DD YL TSE
Sbjct: 186 DFIPLITPTLVRPEMMAGTGFLGEHSDEIYYL---------------PADDLYLTGTSEV 230
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFR-------------------------------- 251
+ H D L + P+RY G STC+R
Sbjct: 231 ALAGYHSDEILDLSKGPLRYAGWSTCYRREAGSAGKDNRGILRVHQFNKLEMFSYVLPEN 290
Query: 252 -----------QEDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
QE + ++ ++YRV+++ G L +AA+K D+EAW P G +REL S S
Sbjct: 291 AQAEHERLLSFQESMLQACELSYRVIDVAGGDLGSSAARKYDIEAWVPTQGTYRELTSTS 350
Query: 299 NCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDC 357
NC YQ+RRL +RY + + K V +N T ATTR + AILETHQ G V +P
Sbjct: 351 NCTTYQARRLDIRY---RTESGKTAPVATINGT-LATTRWLVAILETHQQPDGSVVVPKA 406
Query: 358 LRKFVPAVYVNE 369
LR ++ + + E
Sbjct: 407 LRPYLGGLEILE 418
>gi|359775828|ref|ZP_09279150.1| seryl-tRNA synthetase [Arthrobacter globiformis NBRC 12137]
gi|359306844|dbj|GAB12979.1| seryl-tRNA synthetase [Arthrobacter globiformis NBRC 12137]
Length = 445
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 194/438 (44%), Gaps = 110/438 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF----NKFKNLCSKVIGEKMKA 70
+P+K R +Q+ R + LVD +I+ D R +N N F ++ GE+ +A
Sbjct: 29 NPDKFRASQRARGADETLVDAIIDADAARRTALISFENLRAEQNAFGKKVAQAKGEEKQA 88
Query: 71 -----KEPVGDSS------------------TLPGNHLHPSVPVSNNEDENGIVRTKG-- 105
+E G T+P N + VP + ED+ +V+T G
Sbjct: 89 LLAEVRELAGAVKAASAEADAAQAKQEELLRTIP-NLIEDGVP-AGGEDDYVVVKTVGTP 146
Query: 106 ----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWI 161
D E R H+++ +I +D E GA V+G R YFL+G L++ L+Q A+ + I
Sbjct: 147 REFPDFEPR---DHLEIGELIGAIDMERGAKVSGARFYFLRGVGARLEMALLQMAMEQAI 203
Query: 162 EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
E G+ P+ TP +R E MQ + D E+Y++ DD YL+ TS
Sbjct: 204 EAGFIPMITPTLVRPETMQGTGFDVKHDAEIYRLAE---------------DDLYLVGTS 248
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQED--------------------------- 254
E P+ H D L ++ PIR+ G S+C+R+E
Sbjct: 249 EVPLAGYHADEILDLSAGPIRFAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTV 308
Query: 255 -----------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVS 296
L K + YRV++ +G L +AA+K D EAW P GA+REL S
Sbjct: 309 EEAAAEHERLLAWEEQMLAKCELPYRVIDTAAGDLGMSAARKFDCEAWVPTQGAYRELTS 368
Query: 297 CSNCLDYQSRRLLVRY------GQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
SNC +Q+RRL +R G K V LN T ATTR I A+LE HQ
Sbjct: 369 TSNCTTFQARRLNIRERVFTEDGSPKGTRA----VATLNGT-LATTRWIVALLEHHQNAD 423
Query: 351 G-VRIPDCLRKFVPAVYV 367
G V +P L+K++ + V
Sbjct: 424 GSVNVPSALQKYLGGLQV 441
>gi|441522133|ref|ZP_21003787.1| seryl-tRNA synthetase [Gordonia sihwensis NBRC 108236]
gi|441458353|dbj|GAC61748.1| seryl-tRNA synthetase [Gordonia sihwensis NBRC 108236]
Length = 417
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 194/432 (44%), Gaps = 94/432 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + R +P+ VR +Q+ R ++ LVD+++E D R +AD +
Sbjct: 1 MIDLKIVRE----NPDLVRASQRARGEDPGLVDQLLEADAARRSAIAEADALRAEQKSLG 56
Query: 62 KVIG------------------EKMKA---KEPVGDSSTLPGNHLHPSVPV---SNNEDE 97
K++G E++KA K+ DS++ + ++ + ED+
Sbjct: 57 KLVGKASGDEKTALLAKGKELAEQVKAAVAKQNDADSASQAAHRAISNIITDAPAGGEDD 116
Query: 98 NGIVRTKGDTE-VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYA 156
++ G+ + H++L + +D G V+G R YFL G LQ+GL+ A
Sbjct: 117 YLVLEHVGEPRAIDDPKDHLELGESLGLIDMARGVKVSGSRFYFLTGLGAMLQLGLLNMA 176
Query: 157 LSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKY 216
+K G+T + P ++ E+M L +E+Y + DE DD Y
Sbjct: 177 AAKATANGFTLMIPPVLVKPEIMGGTGFLGAHSDEIYHL--------------DE-DDLY 221
Query: 217 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------------- 253
L+ TSE P+ H+D L + P RY G STCFR+E
Sbjct: 222 LVGTSEVPLAGYHKDEILDLSGGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGF 281
Query: 254 --------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAF 291
D+ +I YRV+++ G L +AA+K D EAW P G +
Sbjct: 282 IYCKPEDAEAEHQRILGWEKDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQGTY 341
Query: 292 RELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG 351
REL S SNC +Q+RRL VRY + N K + LN T ATTR + AILE HQ G
Sbjct: 342 RELTSTSNCTTFQARRLSVRY---RDENGKPQIAATLNGT-LATTRWLVAILENHQQPDG 397
Query: 352 -VRIPDCLRKFV 362
VR+P+ L +FV
Sbjct: 398 SVRLPEELARFV 409
>gi|118575306|ref|YP_875049.1| seryl-tRNA synthetase [Cenarchaeum symbiosum A]
gi|166228637|sp|A0RTS8.1|SYS_CENSY RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|118193827|gb|ABK76745.1| seryl-tRNA synthetase [Cenarchaeum symbiosum A]
Length = 418
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 195/430 (45%), Gaps = 101/430 (23%)
Query: 15 DPEKVRKNQKD-----RFKNVEL-VDKVIENDLKWRQFRHKADNFNKFKNLCSKVI---- 64
DP +R KD + +NV+ +D +++ D + R F AD+ + +N + +
Sbjct: 3 DPHILRSRPKDVSDMLQARNVDFDLDALLDADERRRYFMQLADDMRQERNFAGRQVAQFK 62
Query: 65 ------------------------GEKMKAK-EPVGDSSTLPGNHLHPSVPVSNNEDENG 99
GE+ A+ E + + T+P N + SVP +E N
Sbjct: 63 RDGVDTTAAIKEMKDLSEKLYQAEGEQQSAESEYLELAWTIP-NMIDKSVPRGPDETANV 121
Query: 100 IVRT-KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS 158
++R G H +L +D + A V+G R Y+LKG V L L+ ++L
Sbjct: 122 VLRKWVGTPTPSVPKGHEELAVGRGLLDMKRAAKVSGARFYYLKGSLVRLNQALISHSLD 181
Query: 159 KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLI 218
+GYT + P+ +R+ M+ F++ +YK+ E DD YLI
Sbjct: 182 FLGSRGYTLVQPPYLIRRNAMEGAIIAEDFEDVIYKI---------------EDDDLYLI 226
Query: 219 ATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------------- 253
TSE + A+H D + E LP+RY GVS CFR+E
Sbjct: 227 GTSEHAMAAMHSDEII-EGGLPLRYAGVSPCFRKEAGAHGKDQKGIFRVHQFDKIEQFVF 285
Query: 254 --------------DLTK------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRE 293
++T+ I YRVV + SG + +AK D+E W A+RE
Sbjct: 286 SKPEDSWREHDRMLEITEEFYQGLGIPYRVVLLSSGDMGKVSAKTYDIECWMAAQDAYRE 345
Query: 294 LVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-V 352
+VSCSNCLD+QSRRL VR+ + +E ++VH LN+T AT+R++ I+E Q G +
Sbjct: 346 VVSCSNCLDFQSRRLKVRF--RDRTDEDTQYVHTLNSTLAATSRLLACIIENFQEADGTI 403
Query: 353 RIPDCLRKFV 362
R+P L+K+V
Sbjct: 404 RVPQPLQKYV 413
>gi|297625341|ref|YP_003687104.1| seryl-tRNA synthetase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921106|emb|CBL55653.1| Seryl-tRNA synthetase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 424
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 190/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQ----FRHKADNFNKFK 57
++D L RT DP++VR++Q+ R ++VELVD+ + D R F
Sbjct: 1 MIDPKLLRT----DPDRVRRSQRARGESVELVDQALAADEARRSSISAFEQARAEQKSLG 56
Query: 58 NLCSKVIGEKMKA-----KEPVGDSSTLP-----------------GNHLHPSVPVSNNE 95
L +K G++ A KE L GN + VP E
Sbjct: 57 ALIAKASGDERNALLSRTKELAAKVRELDASAHEADEHYTEVVKQFGNIVFEDVP-EGGE 115
Query: 96 DENGIVRTKGDT-----EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ ++ T+G E H++L M+D +D E GA V+G R Y+LKGP L+
Sbjct: 116 DDLFVIDTEGTPRDFAGEGITIRDHLELGEMLDAIDMERGAKVSGSRFYYLKGPGAMLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+Q+AL K +E G TP+ P + M+ L Q +++Y +
Sbjct: 176 ALIQFALHKALEWGLTPMIPPALVNPAAMEGTGFLGQAADDVYYL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK------------- 257
E D++YL+ T+E P+ A H D L LP+RY G S +R+E +
Sbjct: 221 ERDNQYLVGTAEVPLAAYHSDEILDSKELPLRYAGFSPAYRREAGSYGKDTRGIFRVHWF 280
Query: 258 --------------------------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
I + V+++ SG L +AA+K D W
Sbjct: 281 DKFEMFTYCRPEDAVAEHERLLAHEKEFISALGIPFEVLDVASGDLGLSAARKYDCYGWV 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC ++Q+RRL +R K++ + LN T CA TR+I ILE
Sbjct: 341 PSQDKYREITSTSNCTEFQARRLNIRMRDGKQVTP----LATLNGTLCAMTRMIVMILEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
+Q G V IP+ LR ++
Sbjct: 397 YQQVDGSVVIPEVLRPYL 414
>gi|332527970|ref|ZP_08404004.1| seryl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
gi|332112544|gb|EGJ12337.1| seryl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
Length = 430
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 155/324 (47%), Gaps = 62/324 (19%)
Query: 88 SVPVSNNEDENGIVRTKGDTEVRK--KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
SVPV +E N +R G + HVD+ + G+D + GA +AG R FL+GPA
Sbjct: 113 SVPVGADESGNVELRRWGTPRTFEFTPKDHVDVGQPL-GLDFDTGARLAGARFTFLRGPA 171
Query: 146 VCLQVGLVQYAL-SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
L L Q+ L ++ E GYT +TP+ + +EV++ QL +F E+++ V+ G+
Sbjct: 172 ARLHRALAQFMLDTQTQEHGYTECWTPYIVNREVLEGTGQLPKFKEDMFWVLRGGD---- 227
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------ 258
+E ++YLI+TSE P+ R+ L A+LPI+ S CFR E +
Sbjct: 228 -----EEQREQYLISTSEIPLTNTVREQILDAAALPIKLTAHSPCFRSEAGSAGRDTRGM 282
Query: 259 ---------------------------------------IAYRVVNIVSGALNHAAAKKL 279
+ YRV+ + SG + +AK
Sbjct: 283 IRQHQFDKVEMVQIVRPEDSDAALEQMVGHAEAILQKLELPYRVITLCSGDMGFGSAKTY 342
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
DLE W P G +RE+ SCSNC +Q+RR+ R+ + K EFVH LN + A R +
Sbjct: 343 DLEVWLPAQGTYREISSCSNCEAFQARRMQARF---RNAQGKTEFVHTLNGSGLAVGRAL 399
Query: 340 CAILETHQTETG-VRIPDCLRKFV 362
A+LE HQ G +R+P LR ++
Sbjct: 400 VAVLENHQQADGSIRVPAALRPYL 423
>gi|330834196|ref|YP_004408924.1| seryl-tRNA synthetase [Metallosphaera cuprina Ar-4]
gi|329566335|gb|AEB94440.1| seryl-tRNA synthetase [Metallosphaera cuprina Ar-4]
Length = 441
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 189/430 (43%), Gaps = 119/430 (27%)
Query: 32 LVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG-----------EKMKAKEPVGDSS-- 78
L +K ++ D KWR +A+ N+ S I E+ +A V DS
Sbjct: 15 LAEKAVQLDRKWRSVLQEAEKLRHEHNVVSSQIPKLSAEERKKRIEEARALLAVLDSKEK 74
Query: 79 --------------TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVD-LITMID 123
LP N +H SVPV ++ N ++ G V +K +D ++ ++
Sbjct: 75 ELKEIEEERDNLLRALP-NLVHESVPVGPDDSYNVPIKVWGKFRVYEK--DLDGFLSQVN 131
Query: 124 GVDSEAGAI-------------------------VAGGRGYFLKGPAVCLQVGLVQYALS 158
G++++ I VAG R Y+L V ++ L+ YA+
Sbjct: 132 GLNAQYELIKFKPTPHADELENVLKLGNTVKASEVAGSRFYYLFDDIVWIEQALIMYAID 191
Query: 159 KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLI 218
KG++ + P+ +R EV+Q V L F + +YK+ G +D YLI
Sbjct: 192 TITSKGFSLVVPPYMLRGEVIQSVIDLDTFKDAIYKIEG---------------EDLYLI 236
Query: 219 ATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------DLTK--------------- 257
AT+E PI ++ + LP++++G+S FR+E DL
Sbjct: 237 ATAEHPIASLFFKEEIEAERLPLKFVGISPAFRKEAGAANKDLKGIFRVHQFNKVEQFIF 296
Query: 258 ------------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRE 293
+ YRVVNI SG L AAKK DLE W P FRE
Sbjct: 297 SLPEDSWKFHDELLYNAEQIFQGLELPYRVVNIASGDLGACAAKKYDLEVWMPAQAKFRE 356
Query: 294 LVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-V 352
+VSCSNC D+Q+ R+ +R+ KK N K +VH LN+TA ATTR I AILE +Q E G V
Sbjct: 357 MVSCSNCTDWQAFRMKIRFVDRKK-NRK-GYVHTLNSTAVATTRAITAILENNQLEDGSV 414
Query: 353 RIPDCLRKFV 362
IP LR ++
Sbjct: 415 VIPRVLRSYL 424
>gi|449497050|ref|XP_004160298.1| PREDICTED: serine--tRNA ligase-like [Cucumis sativus]
Length = 563
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 170/342 (49%), Gaps = 81/342 (23%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N HP VP+ ED + I + G +++S H++L +D D +A A V+G +
Sbjct: 230 NTTHPDVPI-GGEDCSIIRKMVGSP---REFSFPVKDHLELGKQLDIFDFDAVAEVSGSK 285
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEELYKVI 196
Y+LK AV L++GL+ + LS+ +++G+TPL TP +R V+++ Q + ++Y +
Sbjct: 286 FYYLKNAAVTLELGLINWTLSEVMKRGFTPLITPEIVRSTVVEKCGFQPRGENTQVYSIE 345
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR----- 251
G D+ LI T+E P+ +H DS L E+SLP++Y+ S CFR
Sbjct: 346 G---------------SDQCLIGTAEIPVGGIHMDSILSESSLPLKYVAYSHCFRTEAGA 390
Query: 252 --------------------------------------QEDLTKSIA--YRVVNIVSGAL 271
+EDL S+ ++ +++ S L
Sbjct: 391 AGAATRGLYRVHQFSKVEMFIFCRPEESESYHEELIRIEEDLFSSLGLHFKTLDMASADL 450
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKI--------- 322
A +K D+EAW PG G + E+ S SNC DYQSRRL +RY +++ +
Sbjct: 451 GAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQEQVPSTLKKGKGNLAP 510
Query: 323 -EFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+FVH LNATACA R++ +LE +Q E G V IP+ LR F+
Sbjct: 511 TQFVHTLNATACAVPRMMVCLLENYQQEDGSVIIPEPLRPFM 552
>gi|325675174|ref|ZP_08154860.1| serine--tRNA ligase [Rhodococcus equi ATCC 33707]
gi|325554135|gb|EGD23811.1| serine--tRNA ligase [Rhodococcus equi ATCC 33707]
Length = 421
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 185/436 (42%), Gaps = 98/436 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
+V+DL R +P+ VR +Q+ R ++ LVD ++E D R D +
Sbjct: 2 VVIDLKFLRE----NPDAVRTSQRTRGEDPGLVDALLEADASRRAAILAGDTLRAEQKAF 57
Query: 61 SKVIGEKMKAKEP--------------------------VGDSSTLPGNHLHPSVPVSNN 94
K +G+ + P + ++ N + P +
Sbjct: 58 GKKVGQASPEERPALLAGSKELAQKVKDAEAAQHEAQAKLDEAHRAISNIVQDGAP-AGG 116
Query: 95 EDENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
ED+ + T G+ T + H++L + +D E GA V+G R YFL G LQ+G+
Sbjct: 117 EDDFITLETVGEIPTFDFEPKDHLELGESLGLIDMERGAKVSGSRFYFLTGFGAMLQLGM 176
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+Q A K + G+T + P +R EVMQ L Q +E+Y +
Sbjct: 177 LQLAAQKAMANGFTMMIPPVLVRPEVMQGTGFLGQHSDEVYHLAD--------------- 221
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------- 253
DD YL+ TSE P+ H L + P RY G S+CFR+E
Sbjct: 222 DDLYLVGTSEVPLAGYHSGEILDLSKGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 281
Query: 254 ------------------------DLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPG 287
D+ ++ YRV+++ G L +AA+K D EAW P
Sbjct: 282 VEMFTYCKPEDADAEHQRLLAWERDMLDAMGLPYRVIDVAGGDLGSSAARKFDCEAWVPT 341
Query: 288 SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
A+REL S SNC YQ+RRL VRY + N K + LN T ATTR + AILE HQ
Sbjct: 342 QQAYRELTSTSNCTTYQARRLSVRY---RDENGKPQTAATLNGT-LATTRWLVAILENHQ 397
Query: 348 TETG-VRIPDCLRKFV 362
G VR+P L FV
Sbjct: 398 QADGSVRVPAALVPFV 413
>gi|255326158|ref|ZP_05367245.1| serine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
gi|255296869|gb|EET76199.1| serine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
Length = 436
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 196/454 (43%), Gaps = 111/454 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D++L R +P+ R +Q+ R K+ VD+++E D R + + +N
Sbjct: 1 MIDINLLRE----NPDVFRASQRARGKDETHVDRILEADTARRALIGEYETLRAEQNAFG 56
Query: 62 KVIGEKMKAKEP--VGDSSTLPG------------------------NHLHPSVPVSNNE 95
K + + K ++P V + L N + VPV E
Sbjct: 57 KTVAKAPKEEKPALVAQAKELAARVNEAKTASEAKTAEYEELISSIENLIIDGVPV-GGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G TE + H+++ ++DG+D GA V+G R YFLKG L+
Sbjct: 116 DDYVVVKEVGTPRDFTTEGFEPRDHLEIGELVDGIDMARGAKVSGARFYFLKGQVARLEQ 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ AL E G+T + TP +R E+M + D+E+Y++
Sbjct: 176 ALMWMALDLATEHGFTMMTTPTLVRPEIMNGTGFNVKHDDEIYRL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK------------- 257
E DD YL+ TSE + H D L +YLG S+C+R+E +
Sbjct: 221 ERDDLYLVGTSEVALAGYHTDEILDFEKGAKKYLGWSSCYRREAGSAGKDTRGIIRVHQF 280
Query: 258 --------------------------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
+AYRV++ +G L +AA+K D EAW
Sbjct: 281 NKAEMFVYCPVEQAEEMHEKLLSLEEEMLQRCGLAYRVIDTAAGDLGTSAARKFDCEAWV 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-------KIEFVHMLNATACATTRV 338
P G +REL S SNC YQ+RRL +R ++E + V LN T ATTR
Sbjct: 341 PTQGTYRELTSTSNCTTYQARRLNIRERTPDTVDEAGNVRKGRTRSVATLNGT-LATTRW 399
Query: 339 ICAILETHQTETG-VRIPDCLRKF------VPAV 365
+ AILETHQ G VRIP+ LR + +PAV
Sbjct: 400 VVAILETHQQADGSVRIPEALRPYMGGAEVIPAV 433
>gi|422323979|ref|ZP_16405016.1| seryl-tRNA synthetase [Rothia mucilaginosa M508]
gi|353344772|gb|EHB89073.1| seryl-tRNA synthetase [Rothia mucilaginosa M508]
Length = 436
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 196/454 (43%), Gaps = 111/454 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D++L R +P+ R +Q+ R K+ VD+++E D R + + +N
Sbjct: 1 MIDINLLRE----NPDVFRASQRARGKDETHVDRILEADTARRALIGEYETLRAEQNAFG 56
Query: 62 KVIGEKMKAKEP--VGDSSTLPG------------------------NHLHPSVPVSNNE 95
K + + K ++P V + L N + VPV E
Sbjct: 57 KTVAKAPKEEKPALVAQAKELAARVNEAKAASEAKTAEYEELISSIENLIIDGVPV-GGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G TE + H+++ ++DG+D GA V+G R YFLKG L+
Sbjct: 116 DDYVVVKEVGTPRDFTTEGFEPRDHLEIGELVDGIDMARGAKVSGARFYFLKGQVARLEQ 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ AL E G+T + TP +R E+M + D+E+Y++
Sbjct: 176 ALMWMALDLATEHGFTMMTTPTLVRPEIMNGTGFNVKHDDEIYRL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK------------- 257
E DD YL+ TSE + H D L +YLG S+C+R+E +
Sbjct: 221 ERDDLYLVGTSEVALAGYHTDEILDFEKGAKKYLGWSSCYRREAGSAGKDTRGIIRVHQF 280
Query: 258 --------------------------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
+AYRV++ +G L +AA+K D EAW
Sbjct: 281 NKAEMFVYCPVEQAEEMHEKLLSLEEEMLQRCGLAYRVIDTAAGDLGTSAARKFDCEAWV 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-------KIEFVHMLNATACATTRV 338
P G +REL S SNC YQ+RRL +R ++E + V LN T ATTR
Sbjct: 341 PTQGTYRELTSTSNCTTYQARRLNIRERTPDTVDEAGNVRKGRTRSVATLNGT-LATTRW 399
Query: 339 ICAILETHQTETG-VRIPDCLRKF------VPAV 365
+ AILETHQ G VRIP+ LR + +PAV
Sbjct: 400 VVAILETHQQADGSVRIPEALRPYMGGAEVIPAV 433
>gi|71407799|ref|XP_806343.1| seryl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
gi|70870063|gb|EAN84492.1| seryl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 227
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 117/226 (51%), Gaps = 55/226 (24%)
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------- 253
++KYLIATSE PI A HR W E P++Y G+S+CFR+E
Sbjct: 7 EEKYLIATSEMPIAAYHRGKWFTELKEPLKYAGMSSCFRKEAGAHGRDTLGIFRVHQFDK 66
Query: 254 --------------------------DLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWF 285
+ +S+ YR +NI SGALN+AAAKK D+EAWF
Sbjct: 67 LEQFLVCSPREEESWRHLEEMIRTSEEFCESLGLPYRTINICSGALNNAAAKKYDVEAWF 126
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYG---QTKKMNEKIEFVHMLNATACATTRVICAI 342
P SGAFRELVSCSNC DYQ+R + R+G + N E+ HMLN T CA TR +C I
Sbjct: 127 PASGAFRELVSCSNCTDYQARGVNCRFGPNLRNVSANNVKEYCHMLNGTLCAITRTMCCI 186
Query: 343 LETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 388
E +QTE GV IPD LR ++ + + + F P EE K
Sbjct: 187 CENYQTEEGVVIPDVLRPYMMGLEM-----LKFADNVPSAEETEPK 227
>gi|383821245|ref|ZP_09976492.1| seryl-tRNA synthetase [Mycobacterium phlei RIVM601174]
gi|383333573|gb|EID12023.1| seryl-tRNA synthetase [Mycobacterium phlei RIVM601174]
Length = 419
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 186/436 (42%), Gaps = 97/436 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR +Q+ R ++ LVDK+++ D R ADN + S
Sbjct: 1 MIDLKLLRE----NPDAVRASQRARGEDPSLVDKLLDADAARRAAVSAADNLRAEQKAAS 56
Query: 62 KVIGEKMKAKEPV--------------------GDSSTLPGNHLHPS------VPVSNNE 95
K +G+ + P H+ S VP + E
Sbjct: 57 KKVGKAAPEERPALLEQAKALAEKVRAAEADQAEAEKAFTAAHMAISNVIIDGVP-AGGE 115
Query: 96 DENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ T G+ + HV+L + +D E GA V+G R YFL G LQ+GL+Q
Sbjct: 116 DDFVVLDTVGEPPRIDNPKDHVELGESLGLIDLERGAKVSGARFYFLTGAGALLQLGLMQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A + G+T L P +R EVM L EE+Y++ E DD
Sbjct: 176 LAARLATDNGFTLLIPPVLVRPEVMSGTGFLGAHAEEVYRL---------------EADD 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H D + + P RY G S+CFR+E +
Sbjct: 221 MYLVGTSEVPLAGYHADEIIDLSDGPRRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV++I +G L +AA+K D EAW P
Sbjct: 281 GFVFCKPEEAEAEHERLLNLQREMLAKIEVPYRVIDIAAGDLGSSAARKYDCEAWIPTQQ 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL RY + N K + LN T ATTR + AILE HQ
Sbjct: 341 TYRELTSTSNCTTFQARRLSTRY---RDENGKPQIAATLNGT-LATTRWLVAILENHQQP 396
Query: 350 TG-VRIPDCLRKFVPA 364
G VR+P L FV A
Sbjct: 397 DGSVRVPAALVPFVGA 412
>gi|72160435|ref|YP_288092.1| seryl-tRNA synthetase [Thermobifida fusca YX]
gi|123630454|sp|Q47TZ5.1|SYS_THEFY RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|71914167|gb|AAZ54069.1| seryl-tRNA synthetase [Thermobifida fusca YX]
Length = 422
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 194/431 (45%), Gaps = 112/431 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQF-------------------RHKADN--- 52
DP+++R +Q+ R ++ +VD++++ D + R R A+
Sbjct: 10 DPDRLRASQRARGEDESVVDRLLDLDSRHRAALARFETLRAEQKSVGKSVSRASAEEREA 69
Query: 53 -FNKFKNLCSKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNED-------------EN 98
N+ K+L S+V + +A E + D T L SVP D E
Sbjct: 70 LLNRAKSLASEVKSAEAEA-EALSDELTT----LLRSVPNVVESDAPVGGVDDFVVVEEV 124
Query: 99 GIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS 158
G R T H++L M+ +D+E GA V+G R YFL G L++GL+ A+
Sbjct: 125 GTPRQFDFT----PRDHLELGEMLGAIDTERGAKVSGARFYFLTGVGALLELGLLNLAMQ 180
Query: 159 KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLI 218
+ + G+TP+ P ++ E M L + E+Y + DD YL+
Sbjct: 181 RAVANGFTPMIPPVLVKPETMDGTGFLGEHAAEVYHLPA---------------DDLYLV 225
Query: 219 ATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------------- 253
TSE P+ H + LP +LP RY+G S+CFR+E
Sbjct: 226 GTSEVPLAGYHANEILPADALPTRYIGWSSCFRREAGSYGKDTRGIIRVHQFNKVEMFVY 285
Query: 254 ---------------------DLTKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFR 292
DL + + YRVV+I +G L +AA+K D EAW P G +R
Sbjct: 286 AHPDEAHEEHLRLLAWEREMLDLIE-VPYRVVDIAAGDLGTSAARKYDCEAWLPSQGRYR 344
Query: 293 ELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG- 351
EL S SNC ++QSRRL +RY T + K FV LN T ATTR I AILE HQ E G
Sbjct: 345 ELTSTSNCTEFQSRRLNIRYRDT---DGKPRFVATLNGT-LATTRWIVAILENHQQEDGS 400
Query: 352 VRIPDCLRKFV 362
V +P+ LR FV
Sbjct: 401 VVVPEALRPFV 411
>gi|15221121|ref|NP_172651.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
gi|332190686|gb|AEE28807.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
Length = 512
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 170/345 (49%), Gaps = 81/345 (23%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N HP VPV ED + I + G +++S H+ L +D +D ++ A V+G +
Sbjct: 179 NMTHPDVPV-GGEDSSAIRQEVGSP---REFSFPIKDHLQLGKDLDLIDFDSAAEVSGSK 234
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE-ELYKVI 196
++LK AV L++ L+ + LS+ ++KGYTPL TP +R ++++ + D ++Y +
Sbjct: 235 FFYLKNEAVLLEMALLNWTLSQVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSID 294
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR----- 251
G D+ LI T+E P+ +H DS L E++LP++Y+ S CFR
Sbjct: 295 GT---------------DQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGA 339
Query: 252 --------------------------------------QEDLTKSIA--YRVVNIVSGAL 271
+EDL S+ ++ +++ + L
Sbjct: 340 AGAATKGLYRVHQFSKAEMFVICQPEDSESFHQELIQIEEDLFTSLGLHFKTLDMATADL 399
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------KMN-EK 321
A +K D+EAW PG G F E+ S SNC DYQSRRL +RY ++ K N
Sbjct: 400 GAPAYRKFDIEAWMPGLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPA 459
Query: 322 IEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
+FVH LNATACA R++ +LE +Q E G V IP+ LR F+ +
Sbjct: 460 TKFVHTLNATACAVPRMMVCLLENYQQEDGSVVIPEPLRPFMGGI 504
>gi|30682484|ref|NP_849647.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
gi|20268723|gb|AAM14065.1| putative seryl-tRNA synthetase [Arabidopsis thaliana]
gi|21689901|gb|AAM67511.1| putative seryl-tRNA synthetase [Arabidopsis thaliana]
gi|332190684|gb|AEE28805.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
Length = 514
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 170/345 (49%), Gaps = 81/345 (23%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N HP VPV ED + I + G +++S H+ L +D +D ++ A V+G +
Sbjct: 181 NMTHPDVPV-GGEDSSAIRQEVGSP---REFSFPIKDHLQLGKDLDLIDFDSAAEVSGSK 236
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE-ELYKVI 196
++LK AV L++ L+ + LS+ ++KGYTPL TP +R ++++ + D ++Y +
Sbjct: 237 FFYLKNEAVLLEMALLNWTLSQVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSID 296
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR----- 251
G D+ LI T+E P+ +H DS L E++LP++Y+ S CFR
Sbjct: 297 GT---------------DQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGA 341
Query: 252 --------------------------------------QEDLTKSIA--YRVVNIVSGAL 271
+EDL S+ ++ +++ + L
Sbjct: 342 AGAATKGLYRVHQFSKAEMFVICQPEDSESFHQELIQIEEDLFTSLGLHFKTLDMATADL 401
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------KMN-EK 321
A +K D+EAW PG G F E+ S SNC DYQSRRL +RY ++ K N
Sbjct: 402 GAPAYRKFDIEAWMPGLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPA 461
Query: 322 IEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
+FVH LNATACA R++ +LE +Q E G V IP+ LR F+ +
Sbjct: 462 TKFVHTLNATACAVPRMMVCLLENYQQEDGSVVIPEPLRPFMGGI 506
>gi|433457255|ref|ZP_20415263.1| seryl-tRNA ligase [Arthrobacter crystallopoietes BAB-32]
gi|432195153|gb|ELK51712.1| seryl-tRNA ligase [Arthrobacter crystallopoietes BAB-32]
Length = 427
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 187/431 (43%), Gaps = 96/431 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF----NKFKNLCSKVIGEKMKA 70
+PE R +Q+ R + L+D +I D R+ + ++ N F ++ GE+ +A
Sbjct: 10 NPEVFRASQRARGADESLIDAIISADASRREAITRYESLRADQNAFGKKVAQAKGEEKQA 69
Query: 71 -----------------------KEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKG-- 105
+ G T+P N + VP + ED+ +++T G
Sbjct: 70 LLAEVKELAAAVKAAQAESEAAQAQQEGLLRTVP-NLVIDGVP-AGGEDDFEVIKTVGKP 127
Query: 106 ---DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIE 162
+ H+++ +I G+D E GA V+G R YFLKG L++ L+ A+ + +
Sbjct: 128 RDFSADGFAPRDHLEIGELIGGIDMERGAKVSGARFYFLKGVGARLELALLNMAMDQAVA 187
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSE 222
G+TP+ TP +R E MQ D E+Y++ DD YL+ TSE
Sbjct: 188 AGFTPMITPTLVRPETMQGTGFDVAHDAEIYRLAD---------------DDLYLVGTSE 232
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------------------ 258
P+ H D L + P+RY G S+C+R+E +
Sbjct: 233 VPLAGYHADEILDLSGGPLRYAGWSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVD 292
Query: 259 ---------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
+ YRV++ +G L +AA+K D EAW P A+REL S
Sbjct: 293 EAAKEHERLLAWEEEMLAKVELPYRVIDTAAGDLGTSAARKFDCEAWVPTQNAYRELTST 352
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPD 356
SNC +Q+RRL VR + + V LN T ATTR I AILE HQ G V +P+
Sbjct: 353 SNCTTFQARRLNVRERVAGEEKKGTRAVATLNGT-LATTRWIVAILEHHQNADGSVTVPE 411
Query: 357 CLRKFVPAVYV 367
LR ++ + V
Sbjct: 412 ALRPYLGGMEV 422
>gi|352682817|ref|YP_004893341.1| seryl-tRNA synthetase [Thermoproteus tenax Kra 1]
gi|350275616|emb|CCC82263.1| Seryl-tRNA synthetase [Thermoproteus tenax Kra 1]
Length = 453
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 184/444 (41%), Gaps = 112/444 (25%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKM------- 68
P+ +R + R + LVD +E D KW+ + + D N+ S+ I +
Sbjct: 13 PDTMRNVLRARRMDPSLVDNFLELDSKWKNLKREIDELRHQHNVLSREISKASQQDRATL 72
Query: 69 --KAKEPVGDSSTLPG-----------------NHLHPSVPVSNNEDENGIVRTKGDTEV 109
KAKE + L N LH SVP+ ++ VR G +V
Sbjct: 73 VEKAKETIARIERLEAQLKEIELERDRVLFSFPNLLHESVPICPEGVDSVPVRYWGTIKV 132
Query: 110 RKKY---------------------SHVDLITMIDG-VDSEAGAIVAGGRGYFLKGPAVC 147
K Y H D + G VD+ VAG R Y+L V
Sbjct: 133 PKDYLNAVLQLDPRPDYIVVDKQPVGHADEAENVLGMVDTLKAGEVAGSRFYYLLDDLVW 192
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L L +AL + KG+ P+ P+ ++ ++++ V F + +YK+ G
Sbjct: 193 LDFALSLFALDRLTAKGFKPIVPPYMLKYDIIRRVIDFDTFKDAIYKIDG---------- 242
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------- 253
+D YLIAT+E I A L E LP Y+G S CFR+E
Sbjct: 243 -----EDLYLIATAEHGIAAYLYGRDLLEGDLPQLYVGWSPCFRKEAGAGSRDIKGIFRV 297
Query: 254 ----------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLE 282
++TK+ + YRVVNI + L AAKK D+E
Sbjct: 298 HIFHKVEQFVFSVAEESWRWHEEITKNTEELIQALGLPYRVVNICAHDLGAPAAKKYDVE 357
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
W+P G FREL SCSN D+Q+ RL +R + K E+VH LN T ATTR I AI
Sbjct: 358 VWYPAQGTFRELASCSNVTDWQAFRLGIR---VTRKGMKREYVHTLNCTGLATTRTITAI 414
Query: 343 LETHQTETG-VRIPDCLRKFVPAV 365
LE +Q E G V IP LR ++ +
Sbjct: 415 LENYQREDGAVEIPKVLRGYLEPI 438
>gi|384103222|ref|ZP_10004199.1| seryl-tRNA synthetase [Rhodococcus imtechensis RKJ300]
gi|419965243|ref|ZP_14481191.1| seryl-tRNA ligase [Rhodococcus opacus M213]
gi|432340612|ref|ZP_19590038.1| seryl-tRNA ligase [Rhodococcus wratislaviensis IFP 2016]
gi|383839063|gb|EID78420.1| seryl-tRNA synthetase [Rhodococcus imtechensis RKJ300]
gi|414569353|gb|EKT80098.1| seryl-tRNA ligase [Rhodococcus opacus M213]
gi|430774361|gb|ELB89963.1| seryl-tRNA ligase [Rhodococcus wratislaviensis IFP 2016]
Length = 418
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 185/435 (42%), Gaps = 98/435 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R +P+ VR++Q+ R ++ LVD ++E D R DN +
Sbjct: 1 MIDLKFLRE----NPDAVRESQRTRGEDPALVDALLEADASRRAAVLAGDNLRAEQKAFG 56
Query: 62 KVIG--------------------------EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K +G E+ +A+ + + N + P + E
Sbjct: 57 KKVGQASPEERPALLEGSKELAAKVKQAEAEQHEAQAALDAAHRAISNVVQEGAP-AGGE 115
Query: 96 DENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
D+ + T G+ T + H++L + +D E GA V+G R YFL G LQ+G++
Sbjct: 116 DDFVTLETVGEIPTFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGFGAMLQLGML 175
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
Q A K + G+ + P +R E+M L +E+Y + D
Sbjct: 176 QLAAQKAMANGFQMMIPPVLVRPEIMAGTGFLGAHADEIYHLAD---------------D 220
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------------- 253
D YL+ TSE P+ H L A P RY G STCFR+E
Sbjct: 221 DLYLVGTSEVPLAGYHSGEILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKV 280
Query: 254 -----------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGS 288
D+ +I YRV+++ G L +AA+K D EAW P
Sbjct: 281 EMFTYCKPEDADAEHQRLLGWERDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQ 340
Query: 289 GAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQT 348
A+REL S SNC +Q+RRL VRY + N K + LN T ATTR I AILE HQ
Sbjct: 341 QAYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT-LATTRWIVAILENHQQ 396
Query: 349 ETG-VRIPDCLRKFV 362
G VR+P+ L FV
Sbjct: 397 SDGTVRVPEALVPFV 411
>gi|385651147|ref|ZP_10045700.1| seryl-tRNA ligase [Leucobacter chromiiresistens JG 31]
Length = 423
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 190/430 (44%), Gaps = 100/430 (23%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEP- 73
DPE V+++Q+ R + +VD+ + D R + ++ +N K + K ++P
Sbjct: 10 DPEAVKRSQRARGNDEAVVDEALAADASRRAALGEFESLRAEQNEFGKQVKAASKEEKPE 69
Query: 74 -VGDSSTLPG------------------------NHLHPSVPVSNNEDENGIVRTKG--- 105
+ + L N + VP S E+ +R G
Sbjct: 70 LIKRAQQLAASVKAADARAKAAEAEFEAVSLRIENLVIEGVP-SGGEENFVTLREVGERP 128
Query: 106 --DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
D E R H++L M+ +D E GA V+G R YFL+G L++ L+ AL + +
Sbjct: 129 DFDFEPR---DHLELGEMLGAIDMERGAKVSGARFYFLRGVGARLELALMNLALDRALHH 185
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
G+TPL TP ++ E+MQ L + +E+Y + + D +L TSE
Sbjct: 186 GFTPLITPTLVKPEIMQGTGFLGEHADEVYHLPAQ---------------DLFLTGTSEV 230
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFR-------------------------------- 251
+ H D + A PIRY G STC+R
Sbjct: 231 ALAGYHADEIIDVAGGPIRYAGWSTCYRSEAGSHGKDTRGILRVHQFNKLEMFVYTDPAE 290
Query: 252 -----------QEDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
QE++ +++ YRV+++ +G L +AA+K D+EAW P A+REL S S
Sbjct: 291 AEAEHERLVGWQEEILQALGLHYRVIDVAAGDLGSSAARKFDIEAWVPTQDAYRELTSTS 350
Query: 299 NCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDC 357
NC YQSRRL RY + + K V LN T ATTR I AILETHQ G V +P+
Sbjct: 351 NCTTYQSRRLSTRY---RTESGKTAAVATLNGT-LATTRWIVAILETHQQADGSVIVPEA 406
Query: 358 LRKFVPAVYV 367
LR ++ + V
Sbjct: 407 LRPYLGGLDV 416
>gi|406983815|gb|EKE04973.1| hypothetical protein ACD_19C00427G0020 [uncultured bacterium]
Length = 411
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 195/426 (45%), Gaps = 88/426 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ R + + V+ + K++ + +VDK+I+ D++ R+ + + +N +
Sbjct: 1 MLDIKFIRE----NVDLVKSSTKNKGFDETVVDKLIQVDIERRRLIGQTEEIRAKRNKLT 56
Query: 62 K--------------VIGEKMKAKE-PVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGD 106
K I EK+K E + L N V V E EN I++T G+
Sbjct: 57 KDDIEEGEKLKVELKEIEEKLKTVEVEFNELINLVPNPASSDVKVGKGEVENEIIKTWGE 116
Query: 107 TE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKG 164
+ HV++ + +D E GA V+G + Y+L G L++ LVQYA ++G
Sbjct: 117 LTKFIFNPKDHVEIGKNLGILDFETGAKVSGSQFYYLYGDGAMLELALVQYAFELLSKEG 176
Query: 165 YTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK--YLIATSE 222
+ P+ TP + + +G G + E++D LIAT+E
Sbjct: 177 FRPVITPDLAKSKYY----------------LGTGYAPKGVEAQTYEINDSDLGLIATAE 220
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------DLTKS--------- 258
+ H D +PE++LP++Y+G S CFRQE TK+
Sbjct: 221 VTLAGSHADEVIPESALPLKYIGYSHCFRQEGGSYGKYSRGLYRVHQFTKAEMFIYCKPE 280
Query: 259 ---------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
I YR++ +G L AA+K D+EAW PG + E+ S
Sbjct: 281 DSLGFHDYLLEMEEKIYQGLGIPYRILKQCTGDLGAMAARKFDVEAWMPGRNDYGEITST 340
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPD 356
SNC DYQ+R L ++Y KK N + E++HMLN +A AT+R I AILE Q E G V IP
Sbjct: 341 SNCTDYQARNLNIKY---KKKNGETEYIHMLNGSAIATSRTIIAILENFQNEDGSVNIPT 397
Query: 357 CLRKFV 362
L+K++
Sbjct: 398 VLQKWM 403
>gi|312137683|ref|YP_004005019.1| seryl-tRNA ligase sers [Rhodococcus equi 103S]
gi|311887022|emb|CBH46331.1| seryl-tRNA ligase SerS [Rhodococcus equi 103S]
Length = 419
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 185/435 (42%), Gaps = 98/435 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R +P+ VR +Q+ R ++ LVD ++E D R D +
Sbjct: 1 MIDLKFLRE----NPDAVRTSQRTRGEDPGLVDALLEADASRRAAILAGDTLRAEQKAFG 56
Query: 62 KVIGEKMKAKEP--------------------------VGDSSTLPGNHLHPSVPVSNNE 95
K +G+ + P + ++ N + P + E
Sbjct: 57 KKVGQASPEERPALLAGSKELAQKVKDAEAAQHEAQAKLDEAHRAISNIVQDGAP-AGGE 115
Query: 96 DENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
D+ + T G+ T + H++L + +D E GA V+G R YFL G LQ+G++
Sbjct: 116 DDFITLETVGEIPTFDFEPKDHLELGESLGLIDMERGAKVSGSRFYFLTGFGAMLQLGML 175
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
Q A K + G+T + P +R EVMQ L Q +E+Y + D
Sbjct: 176 QLAAQKAMANGFTMMIPPVLVRPEVMQGTGFLGQHSDEVYHLAD---------------D 220
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------------- 253
D YL+ TSE P+ H L ++ P RY G S+CFR+E
Sbjct: 221 DLYLVGTSEVPLAGYHSGEILDLSNGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKV 280
Query: 254 -----------------------DLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGS 288
D+ ++ YRV+++ G L +AA+K D EAW P
Sbjct: 281 EMFTYCKPEDADAEHQRLLAWERDMLDAMGLPYRVIDVAGGDLGSSAARKFDCEAWVPTQ 340
Query: 289 GAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQT 348
A+REL S SNC YQ+RRL VRY + N K + LN T ATTR + AILE HQ
Sbjct: 341 QAYRELTSTSNCTTYQARRLSVRY---RDENGKPQTAATLNGT-LATTRWLVAILENHQQ 396
Query: 349 ETG-VRIPDCLRKFV 362
G VR+P L FV
Sbjct: 397 ADGSVRVPAALVPFV 411
>gi|111021024|ref|YP_703996.1| seryl-tRNA synthetase [Rhodococcus jostii RHA1]
gi|397734107|ref|ZP_10500817.1| seryl-tRNA synthetase [Rhodococcus sp. JVH1]
gi|122955575|sp|Q0S9E8.1|SYS_RHOSR RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|110820554|gb|ABG95838.1| serine--tRNA ligase [Rhodococcus jostii RHA1]
gi|396929775|gb|EJI96974.1| seryl-tRNA synthetase [Rhodococcus sp. JVH1]
Length = 418
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 182/435 (41%), Gaps = 98/435 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R +P+ VR++Q+ R ++ LVD ++E D R DN +
Sbjct: 1 MIDLKFLRE----NPDAVRESQRTRGEDPALVDALLEADASRRAAVLAGDNLRAEQKAFG 56
Query: 62 KVIG--------------------------EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K +G E+ +A+ + + N + P + E
Sbjct: 57 KKVGQASPEERPALLEGSKELAAKVKQAEAEQHEAQAALDAAHRAISNVVQEGAP-AGGE 115
Query: 96 DENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
D+ + T GD + H++L + +D E GA V+G R YFL G LQ+G++
Sbjct: 116 DDFVTLETVGDIPAFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGFGAMLQLGML 175
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
Q A K + G+ + P +R E+M L +E+Y + D
Sbjct: 176 QLAAQKAMANGFQMMIPPVLVRPEIMAGTGFLGAHADEVYHLAD---------------D 220
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS--------------- 258
D YL+ TSE P+ H L A P RY G STCFR+E +
Sbjct: 221 DLYLVGTSEVPLAGYHSGEILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKV 280
Query: 259 ------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGS 288
+ YRV+++ G L +AA+K D EAW P
Sbjct: 281 EMFTYCKPEDADAEHQRLLAWEREMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQ 340
Query: 289 GAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQT 348
A+REL S SNC +Q+RRL VRY + N K + LN T ATTR I AILE HQ
Sbjct: 341 QAYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT-LATTRWIVAILENHQQ 396
Query: 349 ETG-VRIPDCLRKFV 362
G VR+P+ L FV
Sbjct: 397 SDGTVRVPEALVPFV 411
>gi|224063277|ref|XP_002301073.1| predicted protein [Populus trichocarpa]
gi|222842799|gb|EEE80346.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 163/342 (47%), Gaps = 81/342 (23%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTE-----VRKKYSHVDLITMIDGVDSEAGAIVAGGR 137
N HP VP+ ED + + + G VR H+ L +D D +A A V+G +
Sbjct: 190 NLTHPLVPI-GGEDSSTVRKMAGTPRDFGFPVR---DHLQLGKELDLFDFDAAAEVSGSK 245
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE-ELYKVI 196
Y+LK AV L++ LV + LS+ ++KG+TPL TP +R V+++ + D ++Y +
Sbjct: 246 FYYLKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQPRGDNTQVYSIE 305
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR----- 251
G D+ LI T+E P+ +H D+ L E LP++Y+ S CFR
Sbjct: 306 G---------------SDQCLIGTAEIPVGGIHMDAILAETQLPLKYVAYSHCFRTEAGA 350
Query: 252 --------------------------------------QEDLTKSIA--YRVVNIVSGAL 271
+EDL ++ Y+ +++ SG L
Sbjct: 351 AGTATRGLYRVHQFTKVEMFVLCRPEESDSYHEELIKIEEDLFSALGLHYKTLDMASGDL 410
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT----------KKMNEK 321
A +K D+EAW PG G + E+ S SNC+DYQSRRL +RY + K
Sbjct: 411 GAPAYRKFDVEAWMPGLGRYGEISSASNCIDYQSRRLGIRYRPSEPTPAPPKKGKGSLAP 470
Query: 322 IEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+FVH LNATACA R+I +LE +Q E G V IP LR F+
Sbjct: 471 TQFVHTLNATACAVPRMIVCLLENYQQEDGSVIIPGPLRAFM 512
>gi|84495480|ref|ZP_00994599.1| seryl-tRNA synthetase [Janibacter sp. HTCC2649]
gi|84384973|gb|EAQ00853.1| seryl-tRNA synthetase [Janibacter sp. HTCC2649]
Length = 426
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 191/440 (43%), Gaps = 101/440 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR-------QFRHKADNFN 54
++DL L R +P++VR +Q+ R ++ +VD V+ + K R Q R +
Sbjct: 1 MIDLKLLRD----NPDRVRASQRARGEDESVVDAVLAAEEKRRNSLTAFEQLRAEQKAMG 56
Query: 55 K----------------FKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
K K + ++V + A E G+ L GN + VPV E
Sbjct: 57 KQVAQAQGDEKQALLARTKEISAQVKLNQTTADEAAGELDRLQRSIGNVIEDGVPV-GGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ ++ T G E + H+ L +D +D E GA V+G R YFLKG L++
Sbjct: 116 DDYVVLETIGAPRDFAAEGFEPKDHLTLFEGLDALDMERGAKVSGSRFYFLKGVGARLEM 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++Q A++K IE G+ P+ TP ++ EVM + +E+Y++
Sbjct: 176 AMLQLAMTKAIEAGFVPMITPTLVKAEVMAGAGFIDHHADEVYRL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
E DD YL TSE + H D + A PIR+ G STC+R+E
Sbjct: 221 EADDLYLTGTSEVALAGYHADEIIDLAKGPIRFAGQSTCYRREAGSYGKDTRGIIRVHQF 280
Query: 254 -----------------------------DLTKSIAYRVVNIVSGALNHAAAKKLDLEAW 284
DL + + YRV++ +G L AA+K D EAW
Sbjct: 281 NKIEMFVYCRPEDATDEHQKLLAFEKEMLDLME-LPYRVIDTAAGDLGGPAARKFDCEAW 339
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEK-IEFVHMLNATACATTRVICAIL 343
P +REL S SNC +Q+RRL RY + + LN T ATTR + AIL
Sbjct: 340 VPTQEKYRELTSTSNCTTFQARRLKTRYRVSGDGGAGPTDTAATLNGT-LATTRWLVAIL 398
Query: 344 ETHQTETG-VRIPDCLRKFV 362
E HQ G + +P LR F+
Sbjct: 399 ENHQQADGSITVPAALRPFI 418
>gi|320104218|ref|YP_004179809.1| seryl-tRNA synthetase [Isosphaera pallida ATCC 43644]
gi|319751500|gb|ADV63260.1| seryl-tRNA synthetase [Isosphaera pallida ATCC 43644]
Length = 432
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 158/332 (47%), Gaps = 68/332 (20%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
N HP P+ E+++ +R G T HV+L +D +D E+ A V+G YF
Sbjct: 108 NRTHPDAPIGRTEEDSRELRRVGSIPTFTFPPKDHVELGKALDLIDFESAAKVSGHGFYF 167
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE-ELYKVIGKG 199
LK AV L + L ++A+ I KGYTP+ TP R +++ + + E ++Y +
Sbjct: 168 LKNDAVLLDLALQRFAIDLLIRKGYTPVVTPDLARNAILEGIGFAPRGPETQVYSI---- 223
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E D L+ T+E + +H D L EA LPIRY+G+S CFR E
Sbjct: 224 -----------EDTDLSLVGTAEITLGGLHADDLLDEADLPIRYVGLSHCFRTEAGAAGR 272
Query: 254 ---------DLTK------------------------------SIAYRVVNIVSGALNHA 274
TK I YRV++I +G L
Sbjct: 273 ASKGLYRVHQFTKVEMFVFSTPETSDALHKELLAIEEEIFQALGIPYRVLDICTGDLGGP 332
Query: 275 AAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
AA+K DLEAW P G + E+ S S+C DYQSRRL VRY K N+K FVH LN T
Sbjct: 333 AARKFDLEAWMPGRGEGGEYGEITSTSDCWDYQSRRLNVRYRPIDK-NQKPRFVHTLNGT 391
Query: 332 ACATTRVICAILETHQTETG-VRIPDCLRKFV 362
A A +R + A++E HQT G + IP+ LR +V
Sbjct: 392 AIAISRALIALMENHQTAHGAIVIPEPLRPYV 423
>gi|163781886|ref|ZP_02176886.1| seryl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159883106|gb|EDP76610.1| seryl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 424
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 197/441 (44%), Gaps = 101/441 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVE-LVDKVIENDLKWRQFRHKADNFNKFKNLC 60
++D++L R + P+ V++ K R + L+D+V+E D + R + + +N
Sbjct: 1 MIDIELIRRK----PDYVKERLKTRDPELPGLIDQVLELDSRRRSLLTEIEALRAERNAR 56
Query: 61 SKVIGE----------------KMKAKEPVGDSST-------------LPGNHLHPSVPV 91
SK IG+ ++KAK D +P N H SVPV
Sbjct: 57 SKEIGKLRLEGKDTTQIESLVRELKAKIDKLDEELKEVQRELRELMLRIP-NLPHESVPV 115
Query: 92 SNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+E EN VR G+ + + H +L + +D E GA ++G R LKG L+
Sbjct: 116 GEDESENVEVRRWGEPKEFTFQPKPHWELGEKLGILDFERGARLSGSRFTVLKGWGARLE 175
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + L KGY + P +R EV++ QL +F+E+LYK E+
Sbjct: 176 RALINFMLDLHRTKGYEEVLPPHLVRPEVLEGTGQLPKFEEDLYKC------------ER 223
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
DEL YLI T+E P+ + R L E LPI + C+R+E
Sbjct: 224 DEL---YLIPTAEVPLTNLFRGEILKEEELPIYLTAHTPCYRREAGSHGKDIRGIIRQHQ 280
Query: 254 ----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+L K + YRVV + +G L +AAK DLE W
Sbjct: 281 FNKVELVKIVHPDTSYDELEKLAADAEEVLKLLGLPYRVVELCTGDLGFSAAKTYDLEVW 340
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G +RE+ SCSNC D+Q+RR+ R+ + N FVH LN + A R + AILE
Sbjct: 341 FPSQGKYREISSCSNCEDFQARRMNTRFKDERGKN---RFVHTLNGSGLAVGRTLAAILE 397
Query: 345 THQTETG-VRIPDCLRKFVPA 364
+Q E G V +P+ LR ++ A
Sbjct: 398 NYQREDGSVEVPEALRDYLKA 418
>gi|118486579|gb|ABK95128.1| unknown [Populus trichocarpa]
Length = 523
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 162/340 (47%), Gaps = 77/340 (22%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKY---SHVDLITMIDGVDSEAGAIVAGGRGY 139
N HP VP+ +++ VR T + H+ L +D D +A A V+G + Y
Sbjct: 190 NLTHPLVPIGG--EDSSTVRKMAGTPRDFGFPVKDHLQLGKELDLFDFDAAAEVSGSKFY 247
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE-ELYKVIGK 198
+LK AV L++ LV + LS+ ++KG+TPL TP +R V+++ + D ++Y + G
Sbjct: 248 YLKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQPRGDNTQVYSIEG- 306
Query: 199 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------- 251
D+ LI T+E P+ +H D+ L E LP++Y+ S CFR
Sbjct: 307 --------------SDQCLIGTAEIPVGGIHMDTILAETQLPLKYVAYSHCFRTEAGAAG 352
Query: 252 ------------------------------------QEDLTKSIA--YRVVNIVSGALNH 273
+EDL ++ Y+ +++ SG L
Sbjct: 353 TATRGLYRVHQFTKVEMFVLCRPEESDSYHEELIKIEEDLFSALGLHYKTLDMASGDLGA 412
Query: 274 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT----------KKMNEKIE 323
A +K D+EAW PG G + E+ S SNC+DYQSRRL +RY + K +
Sbjct: 413 PAYRKFDVEAWMPGLGRYGEISSASNCIDYQSRRLGIRYRPSEPTPAPPKKGKGSLAPTQ 472
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
FVH LNATACA R+I +LE +Q E G V IP LR F+
Sbjct: 473 FVHTLNATACAVPRMIVCLLENYQQEDGSVIIPGPLRAFM 512
>gi|383824310|ref|ZP_09979494.1| seryl-tRNA synthetase [Mycobacterium xenopi RIVM700367]
gi|383337583|gb|EID15959.1| seryl-tRNA synthetase [Mycobacterium xenopi RIVM700367]
Length = 417
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 187/433 (43%), Gaps = 95/433 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DPE VR++Q R ++ LVD ++ D R +AD+ + S
Sbjct: 1 MIDLRLLRD----DPETVRRSQISRGEDPGLVDVLLAADAARRTAISRADSLRAEQKAAS 56
Query: 62 KVIG------------------EKMKAKEPVGDSSTLPGNHLHPS--------VPVSNNE 95
K +G E++KA E V + H + VP E
Sbjct: 57 KKVGAAAAAERPALLQQAKELAEQVKAAEAVQADAEAAFTAAHMAISNVILDGVPAGGEE 116
Query: 96 DENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
D + + H++L + +D GA V+G R YFL G LQ+GL+Q
Sbjct: 117 DYTVLDVVGEPAGIENPRDHLELGESLGLIDMARGAKVSGSRFYFLTGRGALLQLGLLQL 176
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
AL ++ G+ PL P +R +VM L EE+Y++ E DD
Sbjct: 177 ALRLAVDNGFIPLIPPVLVRPQVMSGTGFLGAHAEEVYRI---------------EADDL 221
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------------- 258
YL+ TSE P+ H D L + P+RY+G S+CFR+E +
Sbjct: 222 YLVGTSEVPLAGYHGDEILDLSGGPLRYVGWSSCFRREAGSHGKDTRGIIRVHQFDKVEG 281
Query: 259 ----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
+ YRV+++ +G L +AA+K D EAW P A
Sbjct: 282 FVYCVPDDAEAEHERLLGWQREMLARIEVPYRVIDVAAGELGSSAARKFDCEAWLPSQHA 341
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL RY + + K + LN T ATTR + AILE HQ
Sbjct: 342 YRELTSTSNCTTFQARRLATRY---RDADGKPQIAATLNGT-LATTRWLVAILENHQRPD 397
Query: 351 G-VRIPDCLRKFV 362
G VR+PD L FV
Sbjct: 398 GSVRVPDALVPFV 410
>gi|226363330|ref|YP_002781112.1| seryl-tRNA synthetase [Rhodococcus opacus B4]
gi|254783043|sp|C1B914.1|SYS_RHOOB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|226241819|dbj|BAH52167.1| seryl-tRNA synthetase [Rhodococcus opacus B4]
Length = 418
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 182/434 (41%), Gaps = 96/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R +P+ VR++Q+ R ++ LVD ++E D R DN +
Sbjct: 1 MIDLKFLRE----NPDAVRESQRTRGEDPALVDALLEADASRRAAVLAGDNLRAEQKAFG 56
Query: 62 KVIGEKMKAKEPV--------------------GDSSTLPGNHLHPSVPV-----SNNED 96
K +G+ + P + L H S V + ED
Sbjct: 57 KKVGQASPEERPALLEGSKELAAKVKQAEAGQHEAQAALDAAHRAISNIVQDGAPAGGED 116
Query: 97 ENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
+ + T G+ + H++L + +D E GA V+G R YFL G LQ+G++Q
Sbjct: 117 DFITLETVGEIPAFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGFGAMLQLGMLQ 176
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A K + G+ + P +R E+M L +E+Y + DD
Sbjct: 177 LAAQKAMANGFQMMIPPVLVRPEIMAGTGFLGAHSDEIYHLAD---------------DD 221
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------------- 253
YL+ TSE P+ H L A P RY G STCFR+E
Sbjct: 222 LYLVGTSEVPLAGYHSGEILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVE 281
Query: 254 ----------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
D+ +I YRV+++ G L +AA+K D EAW P
Sbjct: 282 MFTYCKPEDADAEHQRLLAWERDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQQ 341
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
A+REL S SNC +Q+RRL VRY + N K + LN T ATTR I AILE HQ
Sbjct: 342 AYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT-LATTRWIVAILENHQQS 397
Query: 350 TG-VRIPDCLRKFV 362
G VR+P+ L FV
Sbjct: 398 DGTVRVPEALVPFV 411
>gi|403509363|ref|YP_006641001.1| serine--tRNA ligase [Nocardiopsis alba ATCC BAA-2165]
gi|402800555|gb|AFR07965.1| serine--tRNA ligase [Nocardiopsis alba ATCC BAA-2165]
Length = 427
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 143/294 (48%), Gaps = 65/294 (22%)
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFM 174
H++L M+ +D E GA V+G R YFL G L++ L+ A+++ +E G+TP+ P +
Sbjct: 137 HLELGEMLGAIDMERGAKVSGARFYFLTGVGARLELALLNMAMNQAVEAGFTPMIPPVLV 196
Query: 175 RKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL 234
+ E M+ L + +E+Y++ PE DD YL+ TSE + H L
Sbjct: 197 KPETMEGTGFLGEHSDEVYRL-----------PE----DDLYLVGTSEVALAGYHGGEIL 241
Query: 235 PEASLPIRYLGVSTCFRQEDLTKS------------------------------------ 258
P S+P RY+G S+CFR+E +
Sbjct: 242 PGESMPRRYIGWSSCFRREAGSYGKDTRGIIRVHQFNKVEMFVYTHPDQAHEEHERLLAW 301
Query: 259 ---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
+ YRVV+I G L +AA+K D EAW P +REL S SNC ++Q+RRL
Sbjct: 302 ERRMLDKLDLPYRVVDIAGGDLGTSAARKYDCEAWVPTQETYRELTSTSNCTEFQARRLN 361
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
VRY + + K F LN T ATTR I AILE HQ E G V +P+ LR ++
Sbjct: 362 VRY---RDEDGKPRFAATLNGT-LATTRWIVAILENHQREDGSVVVPEALRPYL 411
>gi|318061333|ref|ZP_07980054.1| seryl-tRNA synthetase [Streptomyces sp. SA3_actG]
gi|318078670|ref|ZP_07986002.1| seryl-tRNA synthetase [Streptomyces sp. SA3_actF]
Length = 416
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 180/421 (42%), Gaps = 97/421 (23%)
Query: 19 VRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI-------------- 64
+R +Q+ R ++V LVD ++ D + R + D + K+I
Sbjct: 1 MRASQRARGEDVGLVDSLLSADERRRSSGVRFDELRAEQKQLGKLIPKAQGDEKQELLKR 60
Query: 65 ------------GEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKG-----DT 107
E+ A D GN +HP VPV ED ++ T G +
Sbjct: 61 TGELAAAVKAADAEQSDAAAQTQDLLRRLGNLVHPDVPVGGEED-FALLETHGTIRDFEA 119
Query: 108 EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTP 167
E H++L ++ +D E A V+G R Y+L G L++ LV A+++ G+TP
Sbjct: 120 EGFAPKDHLELGHLLGAIDVERAAKVSGSRFYYLSGIGALLELALVNAAIAQATAAGFTP 179
Query: 168 LYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICA 227
+ TP +R + M L Q +++Y + KD DD YL+ TSE +
Sbjct: 180 MLTPALVRPQAMDGTGFLGQAGQDVYHL-------------KD--DDLYLVGTSEVALAG 224
Query: 228 VHRDSWLPEASLPIRYLGVSTCFRQED--------------------------------- 254
H D + LP+RY G S CFR+E
Sbjct: 225 YHMDEIIEADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFTYVAPEDSEAE 284
Query: 255 -----------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLD 302
LT + +RV+++ +G L +AA+K D EAW P G +REL S S+C +
Sbjct: 285 HRRLLEWEKQWLTSLGLPFRVIDVATGDLGSSAARKFDCEAWIPTQGKYRELTSTSDCTE 344
Query: 303 YQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
+Q+RRL +R KK + LN T CA R I A+LE HQ G VR+P+ LR +
Sbjct: 345 FQARRLSIRMRDGKKTRP----LATLNGTLCAVPRTIVALLENHQQADGSVRVPEVLRPY 400
Query: 362 V 362
+
Sbjct: 401 L 401
>gi|256374275|ref|YP_003097935.1| seryl-tRNA synthetase [Actinosynnema mirum DSM 43827]
gi|255918578|gb|ACU34089.1| seryl-tRNA synthetase [Actinosynnema mirum DSM 43827]
Length = 416
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 188/436 (43%), Gaps = 103/436 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFN----KFK 57
++DL R +PE VR +Q+ R ++ LVD ++ D + R +AD F
Sbjct: 1 MIDLKALRE----NPEAVRASQRARGEDESLVDALLSADERRRSAVSRADTLRGEQKAFG 56
Query: 58 NLCSKVIGEK-----MKAKEPVGD------------------SSTLPGNHLHPSVPVSNN 94
K GE+ +K KE + ++P N +HP P
Sbjct: 57 KQVGKARGEEREALLVKGKELAAEVKAAEADQAAAEAELTELHRSVP-NLVHPDAP-EGG 114
Query: 95 EDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
ED+ +V+ G+ + H+DL T + +D E GA V+G R YFL G L++ L
Sbjct: 115 EDDYVVVKHVGEPREFDFEPLDHLDLGTRLGAIDMERGAKVSGSRFYFLTGIGAQLELAL 174
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ A+++ G+ + TP +R EVM L E+Y++ E
Sbjct: 175 LNMAVAQATAAGFQLMITPTLVRPEVMAGTGFLGAHSSEIYRL---------------EA 219
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------ 254
DD YL+ TSE P+ H D + P RY G S+C+R+E
Sbjct: 220 DDLYLVGTSEVPLAGYHADEII---DGPRRYAGWSSCYRREAGSYGKDTRGIIRVHQFNK 276
Query: 255 --------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPG 287
L K + YRV++ +G L +A++K D EAW P
Sbjct: 277 VEMFSYVPPEEAEAEHARLLAWEEEMLAKVEVPYRVIDTAAGDLGTSASRKFDCEAWVPS 336
Query: 288 SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
A+REL S SNC +Q+RRL VRY + N K + LN T ATTR I AILE HQ
Sbjct: 337 QQAYRELTSTSNCTTFQARRLNVRY---RDENGKSQITATLNGT-LATTRWIVAILENHQ 392
Query: 348 TETG-VRIPDCLRKFV 362
G V +P LR F+
Sbjct: 393 QADGSVVVPQALRPFL 408
>gi|383783221|ref|YP_005467788.1| putative seryl-tRNA synthetase [Actinoplanes missouriensis 431]
gi|381376454|dbj|BAL93272.1| putative seryl-tRNA synthetase [Actinoplanes missouriensis 431]
Length = 420
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 196/438 (44%), Gaps = 105/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DPE +R +Q+ R ++ +LVD ++ D + R + ++ +
Sbjct: 1 MIDLRLLRE----DPELIRASQRLRGESTDLVDALLSADEERRAATQRFESVRAEQ---- 52
Query: 62 KVIGEKMKAKEPVGDSSTLPGN-----------------------HLHPSVP-------V 91
K IG+++ AK + + L H +VP
Sbjct: 53 KSIGKEV-AKASGDERAALLARTKDLALEVKAAEAAAGEAEQALRRAHLAVPNVVEDGAP 111
Query: 92 SNNEDENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
+ ED+ ++R G E+ H+++ + +D+E GA V+G R YFL G LQ+
Sbjct: 112 AGGEDDFVVLREVGAIPEIANPKDHLEIGEALRAIDTERGAKVSGSRFYFLTGVGALLQL 171
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
G++Q A+ + +E G+TP TP +R E M+ L E+Y++
Sbjct: 172 GMLQLAIQQAVEHGFTPSITPTLVRPESMEGTGFLGSHASEIYRL--------------- 216
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
E DD YL+ TSE + A H + + ++ P R+ G STC+R+E
Sbjct: 217 EADDLYLVGTSEVALAAYHTNEIIDLSNGPERFAGWSTCYRREAGSHGKDVRGILRVHQF 276
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
L K I YRV+++ +G L +A++K D EAW
Sbjct: 277 DKVEMFSFCRPEDALAEHQRLLAMEEEMLAKVEIPYRVIDVAAGDLGTSASRKYDCEAWV 336
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +RE+ S SNC +Q+RRL VRY + N K + LN T ATTR + ILE
Sbjct: 337 PSQGRYREVTSTSNCTTFQARRLNVRY---RDENGKTQIAATLNGT-LATTRWLIPILEN 392
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P L+ F+
Sbjct: 393 HQQPDGSVRVPKALQPFL 410
>gi|145221742|ref|YP_001132420.1| seryl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
gi|145214228|gb|ABP43632.1| seryl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
Length = 445
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 184/426 (43%), Gaps = 94/426 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG--------- 65
+P+ VR +Q+ R ++ LVD + E D R ADN + SK IG
Sbjct: 36 NPDAVRASQQARGEDPSLVDALAEADSARRAAISAADNLRAEQKSASKAIGKASPDERPA 95
Query: 66 ---------EKMKAKEPVGDSSTLPGNHLHPSVP-------VSNNEDENGIVRTKGDTEV 109
EK+KA E ++ H ++ + ED+ ++ T G+ V
Sbjct: 96 LLAAAKELSEKVKAAEADQAAAEAAYTAAHMAISNVIIDGVPAGGEDDFVVLDTVGEPRV 155
Query: 110 -RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPL 168
H++L + +D E GA V+G R YFL G LQ+GL Q A+ E G+T +
Sbjct: 156 IPDAKDHLELGEALGLIDMERGAKVSGSRFYFLTGFGALLQLGLFQLAVRTATENGFTLM 215
Query: 169 YTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAV 228
P +R E+M+ L +E+Y + DD YL+ TSE P+
Sbjct: 216 IPPVLVRPEIMRGTGFLGAHADEIYHLAE---------------DDLYLVGTSEVPLAGY 260
Query: 229 HRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------------------------ 258
H D L + P+RY G S+CFR+E +
Sbjct: 261 HSDEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEEAEAEH 320
Query: 259 ---------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDY 303
+ YRV++I +G L +AA+K D EAW P +REL S SNC +
Sbjct: 321 DRLLGWQRQLLAAIEVPYRVIDIAAGDLGSSAARKYDCEAWVPTQQTYRELTSTSNCTTF 380
Query: 304 QSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
Q+RRL VRY + N + + LN T ATTR + AILE HQ G VRIP+ L V
Sbjct: 381 QARRLAVRY---RDENGRPQTAATLNGT-LATTRWLVAILENHQQPDGSVRIPEAL---V 433
Query: 363 PAVYVN 368
P V N
Sbjct: 434 PHVGTN 439
>gi|296121107|ref|YP_003628885.1| seryl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
gi|296013447|gb|ADG66686.1| seryl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
Length = 452
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 158/334 (47%), Gaps = 74/334 (22%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGR 137
N HP PV +E + ++RT G D +VR HV+L + D +D +AG VAG
Sbjct: 127 NLTHPDAPVGPDETFSKVIRTWGTPKAFDFKVR---DHVELAEICDLIDFQAGTKVAGHG 183
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE-ELYKVI 196
YFLK AV L++ LVQ+A+ K + KG+TP TP R EV++ + +E ++Y +
Sbjct: 184 FYFLKNEAVLLELALVQFAIQKLVAKGFTPYVTPDLARHEVLEGTGYNPRGNETQIYSIN 243
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--- 253
G D L+AT+E P+ +D L LPIR G+S CFR E
Sbjct: 244 GT---------------DLSLVATAEIPLGGSLKDEILDIEQLPIRMAGLSHCFRTEAGA 288
Query: 254 -------------------------DLTKS-------------------IAYRVVNIVSG 269
DL S I Y+V++ SG
Sbjct: 289 HGRASRGIYRVHQFTKVEMFAFTAPDLAASNAMHEEIVAIEEEVFQQLGIPYQVLDTCSG 348
Query: 270 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLN 329
L A +K DLEAW PG F E+ S SNC D+QSRRL +R +K + + VH LN
Sbjct: 349 DLGAPAYRKYDLEAWMPGRNTFGEVTSASNCTDFQSRRLGIRCRLPEK--KGTQHVHTLN 406
Query: 330 ATACATTRVICAILETHQ-TETGVRIPDCLRKFV 362
T A +R + A+LE +Q + G+ IP+ LR +V
Sbjct: 407 GTCVAISRALIAVLENYQLADGGIEIPEILRPWV 440
>gi|406926507|gb|EKD62714.1| hypothetical protein ACD_52C00082G0001 [uncultured bacterium]
Length = 423
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 201/433 (46%), Gaps = 90/433 (20%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD R +PEKV++ + + + ++VD+V+E D K R+ K + + +N
Sbjct: 1 MLDTQFIRD----NPEKVKEATEQKGVDRKVVDRVLEADEKRRELIGKVEELKRERNELL 56
Query: 62 KVI-----------GEKMKAK----EPVGDSSTLPGNHLHPSVPVSNNED--------EN 98
K + G+K+K + EP L +P ED EN
Sbjct: 57 KGVTGKPDEVTLAKGKKIKKELAKLEPELKKVEGKFEQLMREIPNPPAEDVKPGKDESEN 116
Query: 99 GIVRTKG---DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
++RT G + E K H+ + +D +D E A V+G R +LKG AV L++ L+Q+
Sbjct: 117 EVLRTWGKKPEFEFEPK-DHLVIGEALDIIDVERAAKVSGTRFGYLKGTAVLLELALIQF 175
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
AL ++G+ P+ P ++K++ + +L ++ E G G+ P +E
Sbjct: 176 ALETLTKEGFIPVIPPVLIKKDMTE---KLGYWEHE-----GHGDYYWVLEP-SEEQKGF 226
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------- 253
YL+ T+E I +HRD + + LP RY+ S+CFR+E
Sbjct: 227 YLVGTAEHSIVPMHRDEVIRASELPKRYVAFSSCFRREAGSYGKDTRGIFRVHQFDKVEM 286
Query: 254 -DLTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
+TK ++Y+VV + SG L AAKK DLE WFP
Sbjct: 287 VSITKPEESDKEHEYLLSLEEKLFQALELSYQVVKMCSGDLGAPAAKKYDLEIWFPSQNK 346
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SN D+Q+RRL ++Y K +VHMLN TA A R I A+LE +Q +
Sbjct: 347 YRELTSTSNTTDFQARRLNIKYNDGKATK----YVHMLNGTAFAIGRTIAAVLENYQLKD 402
Query: 351 G-VRIPDCLRKFV 362
G V++P L+ ++
Sbjct: 403 GSVKVPQILQSYL 415
>gi|313672443|ref|YP_004050554.1| seryl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
gi|312939199|gb|ADR18391.1| seryl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
Length = 421
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 186/420 (44%), Gaps = 95/420 (22%)
Query: 23 QKDRFKNVEL-VDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG-------------EKM 68
QK +N E +K++E DLK R K + K++N SK +G KM
Sbjct: 16 QKTLQRNYEFDFEKIVELDLKRRGLIQKVEELKKYRNEVSKQVGIFKKEGKDISEISSKM 75
Query: 69 KA---------------KEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--K 111
++ ++ + D + N + SVP+ N+E++N V+ G+ V
Sbjct: 76 RSISDEIDNLDKELSEVQQQLNDVMLMIPNIIDDSVPIGNDENDNPEVKKWGEKRVFDFT 135
Query: 112 KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTP 171
SH ++ +D VD E GA ++ R KG L+ L+ + L I KGYT + P
Sbjct: 136 PKSHWEIAEKLDIVDFERGAKLSKSRFSIYKGLGSRLERALINFMLDTHIAKGYTEIIPP 195
Query: 172 FFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRD 231
+ + M QL +F+EEL+K E+DEL YLI T+E P+ ++ D
Sbjct: 196 LLVNAKAMTGTGQLPKFEEELFKC------------ERDEL---YLIPTAEVPVTNIYAD 240
Query: 232 SWLPEASLPIRYLGVSTCFRQE--------------------DLTK-------------- 257
+ LP+ ++ + CFR+E +L K
Sbjct: 241 EIIDYDKLPLNFVSYTPCFRREAGSYGKDVRGLIRQHQFNKVELVKIVEPERSMEELEIL 300
Query: 258 -----------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSR 306
+ YR++ + SG L +++ D+E W PG +RE+ SCSN D+QSR
Sbjct: 301 TDNAAEILRLLGLPYRIIKLCSGDLGFSSSITYDIEVWLPGQNCYREISSCSNFKDFQSR 360
Query: 307 RLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
R +RY + N+ + F H LN + A R AILE +Q E G V +PD L+ ++ V
Sbjct: 361 RAKIRY---RDRNKNVVFPHTLNGSGLAVGRTFLAILENYQQEDGSVVVPDVLKPYMGGV 417
>gi|296268069|ref|YP_003650701.1| seryl-tRNA synthetase [Thermobispora bispora DSM 43833]
gi|296090856|gb|ADG86808.1| seryl-tRNA synthetase [Thermobispora bispora DSM 43833]
Length = 421
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 138/294 (46%), Gaps = 65/294 (22%)
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFM 174
HV+L ++ +D + GA V+G R Y+L G L GL+ A+ + IE G+TP+ P +
Sbjct: 137 HVELGELLGAIDIDRGAKVSGARFYYLTGAGARLVHGLLTMAMHQAIEAGFTPVIPPVLV 196
Query: 175 RKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL 234
+ E M L E+Y++ E DD YL+ TSE + A H D L
Sbjct: 197 KPEAMAGTGFLGAHSAEVYRL---------------EADDLYLVGTSEVSLAAYHADEIL 241
Query: 235 PEASLPIRYLGVSTCFRQEDLTKS------------------------------------ 258
A+LP+RY G S+CFR+E +
Sbjct: 242 DAAALPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFSFCRPEDAHEEHLRLLGW 301
Query: 259 ---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
+ YRVV+I +G L +AA+K D EAW P G +REL S SNC D+Q+RRL
Sbjct: 302 QKQMLDKIEVPYRVVDIATGDLGTSAARKYDCEAWLPSQGRYRELTSTSNCTDFQARRLR 361
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
VRY + + V LN T ATTR I AILE HQ G V +P LR +V
Sbjct: 362 VRY---RDEDGTTRHVATLNGT-LATTRWIVAILENHQQRDGSVVVPKALRPYV 411
>gi|429217503|ref|YP_007175493.1| seryl-tRNA synthetase [Caldisphaera lagunensis DSM 15908]
gi|429134032|gb|AFZ71044.1| seryl-tRNA synthetase [Caldisphaera lagunensis DSM 15908]
Length = 460
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 205/457 (44%), Gaps = 122/457 (26%)
Query: 5 LDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR-------QFRHK----ADNF 53
L+L R DP+K++++ K R + +++D+ +E D KWR + RHK + +
Sbjct: 9 LELLRN----DPDKLKESIKKRQMDTKIIDEALELDNKWRRVLTEINELRHKHNQVSSSI 64
Query: 54 NKFKNLCSKVIGEKMK--------AKEPVGDSS--------TLPGNHLHPSVPVSNNEDE 97
K KN K + E+ K A++ + + LP N + VP+ E+
Sbjct: 65 AKAKNDEKKKLLEEAKELRNQLENAEKELNEIEEKRDKMLRNLP-NIVLDDVPIGG-EEA 122
Query: 98 NGIVRTKGDTEVRKKY-------------------------SHVDLITMIDGV-DSEAGA 131
+R G +V K+Y H D++ + + D+
Sbjct: 123 TVPIRFWGRAKVYKEYLDQFKEQTEKYGFKPDYEIIDYKPIGHADVLENVLKLGDTLKAG 182
Query: 132 IVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEE 191
V+G R Y+L V L L+ YA+ + KGYT + P+ +R +++ V LA F +
Sbjct: 183 EVSGSRFYYLFDDIVWLDFALLFYAIDRLTSKGYTLVLPPYMLRYDIINSVIDLATFQDA 242
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
+YK+ + +D Y+IAT+E PI A++ + L + LP +Y+G S FR
Sbjct: 243 IYKI---------------DNEDLYMIATAEHPIAALYYNEELYDDELPKKYVGFSPAFR 287
Query: 252 QE------DLTK---------------------------------------SIAYRVVNI 266
+E DL + YRVVNI
Sbjct: 288 KEAGAGNRDLKGIFRVHQFHKVEQFIYSLPEDSKKYHEELIMNSEEIFQGLGLPYRVVNI 347
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVH 326
SG L A KK DLE W PG G +RE+VS SNC D+Q+ RL +R + K M ++VH
Sbjct: 348 ASGDLGACAVKKYDLEVWMPGQGKYREMVSGSNCTDWQAYRLNIRLIRRKGMIR--DYVH 405
Query: 327 MLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN+T A+TR I AILE +Q G V IP LRK++
Sbjct: 406 TLNSTGIASTRAITAILENYQQPDGSVIIPKVLRKYL 442
>gi|386853239|ref|YP_006271252.1| seryl-tRNA synthetase [Actinoplanes sp. SE50/110]
gi|359840743|gb|AEV89184.1| seryl-tRNA synthetase [Actinoplanes sp. SE50/110]
Length = 419
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 190/432 (43%), Gaps = 94/432 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP+ +R +Q+ R ++ ELVD ++ D + R + + +
Sbjct: 1 MIDLRLLRD----DPDLIRASQRLRGESTELVDDLLRADEERRSATQRFETVRAEQRSIG 56
Query: 62 KVIGEKMKAKEPVGDSST--------------------LPGNHLH-PSV---PVSNNEDE 97
K + + + + T L HL P+V ED+
Sbjct: 57 KEVAKASGDERAALLTRTKELAAAVKAAEAAAGEAEQALKRAHLAVPNVVDGAPPGGEDD 116
Query: 98 NGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYA 156
++R G E+ + H+++ + +D+E GA V+G R YFL G LQ+G++Q A
Sbjct: 117 FVVLREVGPIPEIAEPKDHLEIGEALAAIDTERGAKVSGSRFYFLTGVGALLQLGMLQLA 176
Query: 157 LSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKY 216
+ + +E G+TP TP +R E M+ L E+Y++ E DD Y
Sbjct: 177 IQQAVEHGFTPSITPTLVRPESMEGTGFLGAHASEIYRL---------------EADDLY 221
Query: 217 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------------ 258
L+ TSE + A H + L ++ P R+ G STC+R+E +
Sbjct: 222 LVGTSEVALAAYHSNEILDLSAGPSRFAGWSTCYRREAGSHGKDVRGILRVHQFDKVEMF 281
Query: 259 ---------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAF 291
I YRV+++ +G L +A +K D EAW P G +
Sbjct: 282 SFCRPEDAAEEHQRLLAMEEEMLAKVEIPYRVIDVAAGDLGSSAVRKFDCEAWVPSQGRY 341
Query: 292 RELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG 351
RE+ S SNC +Q+RRL +RY + N K + LN T ATTR + ILE HQ G
Sbjct: 342 REVTSTSNCTTFQARRLNIRY---RDENGKPQTAATLNGT-LATTRWLIPILENHQQPDG 397
Query: 352 -VRIPDCLRKFV 362
VR+P L+ F+
Sbjct: 398 SVRVPKALQPFL 409
>gi|163841951|ref|YP_001626356.1| seryl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
gi|162955427|gb|ABY24942.1| seryl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
Length = 446
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 183/426 (42%), Gaps = 96/426 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIEND-------LKWRQFRHKADNFNK------------ 55
+PEK R +Q+ R +VD +I D + R + + F K
Sbjct: 30 NPEKYRASQRARGDKESMVDAIISADQSRKSAITSFEALRAEQNAFGKRVAAAKGEEKQE 89
Query: 56 ----FKNLCSKVIGEKMKAKEPVGDSSTL----PGNHLHPSVPVSNNEDENGIVRTKGD- 106
K+L ++V A G+ L P N + VP + +ED+ +V+T G+
Sbjct: 90 LLAQVKDLAARVKASSAAADLAQGEQDELVRAFP-NLIIDGVP-TGDEDDFALVKTVGEP 147
Query: 107 ----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIE 162
H+++ +I G+D E GA V+G R FLKGP L++ L+ AL +
Sbjct: 148 RDFAAAGFAPRDHLEIGELIGGIDMERGAKVSGARFSFLKGPVARLEIALMNMALDQATS 207
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSE 222
G+ P+ TP +R E M + D+E+Y++ E DD YL+ TSE
Sbjct: 208 YGFIPMITPTLVRPETMAGTGFDVKHDDEIYRL---------------EKDDLYLVGTSE 252
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------------------ 258
+ H D + + PIRY G S+C+R+E +
Sbjct: 253 VALAGYHSDEIIDLSKGPIRYAGWSSCYRREAGSAGKDTRGIIRVHQFNKLEMFAYIPLE 312
Query: 259 ---------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
+ YRV++ +G L +AA+K D EAW P G +REL S
Sbjct: 313 EAEAEHARMLAWEEEMLGKLEVPYRVIDTAAGDLGLSAARKFDCEAWVPSQGQYRELTST 372
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPD 356
SNC +Q+RRL +R + + V LN T ATTR I AILE HQ G V +P+
Sbjct: 373 SNCTGFQARRLNIRERIPGEDAKGTRAVATLNGT-LATTRWIMAILENHQNADGTVTVPE 431
Query: 357 CLRKFV 362
LR ++
Sbjct: 432 KLRPYL 437
>gi|119714441|ref|YP_921406.1| seryl-tRNA synthetase [Nocardioides sp. JS614]
gi|166222755|sp|A1SD34.1|SYS_NOCSJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|119535102|gb|ABL79719.1| seryl-tRNA synthetase [Nocardioides sp. JS614]
Length = 424
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 139/294 (47%), Gaps = 65/294 (22%)
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFM 174
H++L M+ +D + GA V+G R YFL G L++ LV A+ + E G+TP+ P +
Sbjct: 140 HIELGRMLGAIDLDRGAKVSGSRFYFLTGAGAELELALVNLAMQQARESGFTPVIAPSMV 199
Query: 175 RKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL 234
+ M L Q +++Y++ G+ D YL+ TSE P+ A H D L
Sbjct: 200 KPRAMDGTGFLGQAADDVYRIEGQ---------------DMYLVGTSEVPMAAYHSDEIL 244
Query: 235 PEASLPIRYLGVSTCFRQEDL-----TKSI------------------------------ 259
+LP+RY S CFR+E TK I
Sbjct: 245 DGGALPLRYAAFSPCFRKEAGSHGKDTKGIIRVHWFDKVEMFVYTTTEESYAEHQRLLAW 304
Query: 260 ----------AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
AYRV+++ +G L +A +K D EAW P G +REL S SNC ++Q+RRL
Sbjct: 305 EKEFLEKLELAYRVIDVAAGDLGLSAQRKFDCEAWIPTQGRYRELTSTSNCTEFQTRRLD 364
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
R + +I + LN T CA TR I A+LETHQ G VR+P L+ ++
Sbjct: 365 TR----GRFGSEIRPISTLNGTLCAITRTIVAVLETHQQADGSVRVPKALQPWL 414
>gi|309812922|ref|ZP_07706650.1| serine--tRNA ligase [Dermacoccus sp. Ellin185]
gi|308432994|gb|EFP56898.1| serine--tRNA ligase [Dermacoccus sp. Ellin185]
Length = 437
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 190/425 (44%), Gaps = 81/425 (19%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIE------NDLKWRQFRHKADNFNK 55
+L+LD R G+ E+VR QK K+V + +D + + + +AD +
Sbjct: 31 ILELDATRRSSLGEFERVRAEQKQVSKSVGAAMGALNKAKKGGDDSEVARLQAEADAARE 90
Query: 56 FKNLCSKVIGEKMKAKEPVGDS-----STLPGNHLHPSVPVSNNEDENGIVRTKGDTEVR 110
S + E + G T+P N + VP + ED+ V+T G+
Sbjct: 91 NAATLSARVKELEATADEAGKEFDALLRTVP-NVVLDGVP-AGGEDDFVTVKTVGEAPTF 148
Query: 111 --KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPL 168
+ H+++ +I +D E G V+G R YFLKG L++ L+Q AL + I +TP+
Sbjct: 149 DFEPKDHLEIGELIGAIDMERGTKVSGSRFYFLKGVGARLELALLQMALDQAIANDFTPM 208
Query: 169 YTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAV 228
TP +R E MQ D E+Y+V E D+ YL+ TSE +
Sbjct: 209 ITPTLVRPETMQGTGFDVAHDAEIYRV--------------QEEDNLYLVGTSEVALAGY 254
Query: 229 HRDSWLPEASLPIRYLGVSTCFRQED---------------------------------- 254
H D L P+RY G S+C+R+E
Sbjct: 255 HADEIL-NVDAPVRYAGWSSCYRREAGSYGKDTRGIIRVHQFNKVEMFSYCRIEDAEAEH 313
Query: 255 ----------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDY 303
L K ++YRV++ +G L +AA+K D EAW P G +REL S SNC +
Sbjct: 314 ARMLAWEEEMLAKCELSYRVIDTAAGDLGTSAARKFDCEAWVPTQGTYRELTSTSNCTTF 373
Query: 304 QSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
Q+RRL +R ++ + V LN T ATTR + AILETHQ G VR+P+ LR ++
Sbjct: 374 QARRLNIR----ERTDGATRSVATLNGT-LATTRWLVAILETHQQADGSVRVPEALRTYM 428
Query: 363 PAVYV 367
+ V
Sbjct: 429 GGLEV 433
>gi|357236550|ref|ZP_09123893.1| putative serine--tRNA ligase [Streptococcus criceti HS-6]
gi|356884532|gb|EHI74732.1| putative serine--tRNA ligase [Streptococcus criceti HS-6]
Length = 426
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 190/443 (42%), Gaps = 103/443 (23%)
Query: 5 LDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI 64
LDL R + D V KN R E +D++ E D+K R K++ +N+ S I
Sbjct: 2 LDLKRIRQNFD--DVAKNLASRGVKAETLDQLKELDIKRRDLLVKSEELKAHRNIASAAI 59
Query: 65 GEKMKAKEPVGDS-----------------------------STLPGNHLHPSVPVSNNE 95
+ + KE + TLP N H VPV +E
Sbjct: 60 AQAKRNKEDASEQIAEMQQVSAQIKAIDAELTEVDQELNDIVVTLP-NMPHADVPVGADE 118
Query: 96 DENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DEN VR G D EV+ +H DL +D +D E GA V G R F KG L+
Sbjct: 119 DENVEVRRWGTPRNFDFEVK---AHWDLGEGLDILDWERGAKVTGSRFLFYKGLGARLER 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
+ + L + ++GYT + P+ + + M Q +F E+ +++ DS
Sbjct: 176 AIYNFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFEL-------ADS----- 223
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
D LI T+E P+ +RD + LPI++ +S FR E
Sbjct: 224 ---DYVLIPTAEVPLTNFYRDEIVDGKDLPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQF 280
Query: 254 ----------------DLTKSIA------------YRVVNIVSGALNHAAAKKLDLEAWF 285
+L K +A YRV+ + +G + +A+K DLE W
Sbjct: 281 HKVEMVKFAKPENSYDELEKMVANAESILQKLELPYRVITLCTGDMGFSASKTYDLEVWI 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ SCSNC D+Q+RR +RY + + K++ +H LN + A R + AILE
Sbjct: 341 PAQNTYREISSCSNCEDFQARRAQIRY--RDEADGKVKLLHTLNGSGLAVGRTVAAILEN 398
Query: 346 HQTETG-VRIPDCLRKFVPAVYV 367
+Q E G + IP+ LR ++ V V
Sbjct: 399 YQNEDGSITIPEVLRPYMGGVEV 421
>gi|161899419|ref|XP_001712936.1| seryl-tRNA synthetase [Bigelowiella natans]
gi|75756430|gb|ABA27324.1| seryl-tRNA synthetase [Bigelowiella natans]
Length = 408
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 155/315 (49%), Gaps = 65/315 (20%)
Query: 95 EDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
+++N ++ K + +YSHV+++ +D VD G AG RGYFLKG + L + LV+
Sbjct: 98 DNKNSLIIKKFKRQPFYRYSHVEIMRKLDIVDLNNGLKAAGNRGYFLKGFGLDLNLALVK 157
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV-IGKGEKVGDSAPEKDELD 213
+ L + + L+ P F+RK++M++ Q+ F +LYK+ I K +
Sbjct: 158 FGLEYLETQQHVKLWAPLFLRKQIMKKCVQILDFKNQLYKIPIAK--------------N 203
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------- 254
YLIAT+EQ IC+ ++ + LP++ STCFR+E
Sbjct: 204 TFYLIATAEQAICSQMYNNTYKISDLPLKLCCYSTCFRKEAGSHGIDSGGLFRVHQFEKI 263
Query: 255 --------------------LTKS--------IAYRVVNIVSGALNHAAAKKLDLEAWFP 286
L +S + Y++V + S LN + K D+EAWFP
Sbjct: 264 EQFIISYSRYFLKNKEFQLLLERSEKFYQQIRLPYQIVEMNSSELNSFSFIKYDIEAWFP 323
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
GS +RE+VSC+NCL+ QS L + K N + N+T AT R++CA++E
Sbjct: 324 GSKTYREVVSCTNCLNMQSNSLK---SKIKTQNSFDCDMCTFNSTLAATERLMCALVENF 380
Query: 347 QTETGVRIPDCLRKF 361
Q + GV+IP CLRK+
Sbjct: 381 QVKEGVKIPHCLRKY 395
>gi|430744117|ref|YP_007203246.1| seryl-tRNA synthetase [Singulisphaera acidiphila DSM 18658]
gi|430015837|gb|AGA27551.1| seryl-tRNA synthetase [Singulisphaera acidiphila DSM 18658]
Length = 431
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 195/429 (45%), Gaps = 101/429 (23%)
Query: 17 EKVRKNQKDRFKNVEL---VDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG-----EKM 68
E V++N ++R ++ VD V+E + K + + + + +N ++ G EK
Sbjct: 12 EAVKQNCRNRNVPTDILDAVDVVVELEQKRKTLLQEVEEVRRLQNANAQATGKEKDPEKR 71
Query: 69 KA--------KEPVGDSST---------------LPGNHLHPSVPVSNNEDENGIVRTKG 105
+A K +GD+ T +P N HP P+ EDE+ +R G
Sbjct: 72 QAFIAEGKQLKASIGDNETELKSLDAHLKSHLARIP-NLTHPDAPIGALEDESLELRKVG 130
Query: 106 DTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
K HV++ +D +D E+GA V+G YFLK AV L++ L Q+A+ + K
Sbjct: 131 TPRAFDFKARDHVEIGKALDLIDFESGAKVSGHGFYFLKNDAVLLELALQQFAIRTLVAK 190
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDE-ELYKVIGKGEKVGDSAPEKDELDDKYLIATSE 222
G++P+ TP R ++++ + + E ++Y V E D LI T+E
Sbjct: 191 GFSPIVTPDLARNQILEGIGFTPRGTETQIYSV---------------EESDLSLIGTAE 235
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------DLTK---------- 257
+ +H D EA LP++Y+G+S CFR E TK
Sbjct: 236 ITLGGMHADEIFDEAVLPLKYVGLSHCFRTEAGAAGRASKGLYRVHQFTKIEMFAFTTPE 295
Query: 258 --------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPG---SGAFREL 294
I YRV++I SG L A +K DLEAW PG +G + E+
Sbjct: 296 ASNQAHAELLAIEEEIFTALGIPYRVLDICSGDLGGPAYRKYDLEAWMPGRGEAGEYGEV 355
Query: 295 VSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VR 353
S S+C DYQ+RRL +RY + + + FVH LN TA A +R + ILE +Q G V
Sbjct: 356 TSTSDCTDYQARRLNIRYRPSGQKGTR--FVHTLNGTALALSRALIVILENYQRADGLVD 413
Query: 354 IPDCLRKFV 362
+P L+ ++
Sbjct: 414 VPTVLQPYM 422
>gi|374854902|dbj|BAL57772.1| seryl-tRNA synthetase [uncultured crenarchaeote]
Length = 288
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 141/293 (48%), Gaps = 62/293 (21%)
Query: 116 VDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMR 175
+D++ + D E A VAG R Y+L V L LVQY L KG+ + P+ +
Sbjct: 1 MDVLAALGLADLETAAKVAGARFYYLFDDLVLLNWALVQYGLDFLKGKGFRLVQPPYMLT 60
Query: 176 KEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLP 235
+++M+ V F++ LYKV G +D YLI T+E P+ +H L
Sbjct: 61 RKIMEGVVSFQDFEDMLYKVEG---------------EDLYLIGTAEHPLAGLHAGEILD 105
Query: 236 EASLPIRYLGVSTCFRQE------------------------------------------ 253
LP+RY G+S CFR+E
Sbjct: 106 GRKLPLRYAGISPCFRKEAGAHGKDTKGIFRVHQFEKVEQFSFTKPSQSWAEHEFLISNA 165
Query: 254 -DLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLV 310
+L +S+ YRVVNI G L AAKK DLE W P +RE+VSCSNC DYQ+ L +
Sbjct: 166 EELYRSLGLPYRVVNICVGELGPVAAKKYDLEVWMPAQNKYREVVSCSNCTDYQAVGLGI 225
Query: 311 RYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
RY + + E+ ++VH LN+T AT R I AILE +QT G V IP+ L+ ++
Sbjct: 226 RYREAPHI-EETDYVHTLNSTLIATERTIVAILENYQTRDGAVEIPEPLQHYL 277
>gi|339006691|ref|ZP_08639266.1| seryl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
gi|338775900|gb|EGP35428.1| seryl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
Length = 427
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 191/439 (43%), Gaps = 100/439 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ + R D E+VR+ R +++ +D+ E D K RQ + D +N S
Sbjct: 1 MLDVKILRQ----DLEEVRRRLAHRNEDISALDQFAEVDEKRRQLIQEGDTLKNKRNTVS 56
Query: 62 --------------------KVIGEKMKA-KEPVGDSS--------TLPGNHLHPSVPVS 92
K + E++KA E + + +LP N H S P+
Sbjct: 57 EQVAVLKRNKENADHLISEMKQVNERIKALDEELRELDEQLTVILLSLP-NLPHESTPIG 115
Query: 93 NNEDENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
ED+N + R GD T + H ++ + +D E + V G R F KG L+
Sbjct: 116 TTEDDNVVHRVWGDASTFSFEPKPHWEVADALGILDFETASKVTGSRFVFYKGMGARLER 175
Query: 151 GLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + + +K GY + P+ + + M QL +F+E+ +K+ G
Sbjct: 176 ALINFMMDLHADKHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFKIDGV----------- 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D +LI TSE P+ +HRD L A LPI+Y S CFR E
Sbjct: 225 ----DYFLIPTSEVPVTNMHRDEILDVAQLPIKYNAFSACFRSEAGSAGRDTRGLIRQHQ 280
Query: 254 ----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+L K + YRV+++ +G L AAKK DLE W
Sbjct: 281 FNKVELVKFVKPEDSYEELEKLVNNAETVLQMLGLPYRVMSMCTGDLGFTAAKKYDLEVW 340
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P +RE+ SCSN D+Q+RR +R+ + K K EFVH +N + A R + AILE
Sbjct: 341 LPSYSTYREISSCSNFEDFQARRANIRFRRDAK--SKPEFVHTMNGSGLALGRTVAAILE 398
Query: 345 THQTETG-VRIPDCLRKFV 362
+Q E G V IP+ LR ++
Sbjct: 399 NYQQEDGSVVIPEALRPYM 417
>gi|283457193|ref|YP_003361762.1| seryl-tRNA synthetase [Rothia mucilaginosa DY-18]
gi|283133177|dbj|BAI63942.1| seryl-tRNA synthetase [Rothia mucilaginosa DY-18]
Length = 435
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 194/450 (43%), Gaps = 105/450 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D++L R +P+ R +Q+ R K+ VD+++E D R + +N +N
Sbjct: 1 MIDINLLRE----NPDVFRASQRARGKDETHVDRILEADTARRALIGEYENLRAEQNAFG 56
Query: 62 KVIGEKMKAKEP--VGDSSTLPG------------------------NHLHPSVPVSNNE 95
K + + K ++P V + L N + VP + E
Sbjct: 57 KKVAKAPKEEKPALVAQAKELAARVNEAKAASEAKTAEYEELISSIENLIIDGVP-TGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G + + H+++ ++DG+D GA V+G R YFLKG L+
Sbjct: 116 DDYVVVKKVGTPRDFTADGFEPRDHLEIGELVDGIDMARGAKVSGARFYFLKGQVARLEQ 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ AL E G+T + TP +R E+M + D+E+Y++
Sbjct: 176 ALMWMALDLATEHGFTMMTTPTLVRPEIMNGTGFNVKHDDEIYRL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK------------- 257
E DD YL+ TSE + H D L +YLG S+C+R+E +
Sbjct: 221 ERDDLYLVGTSEVALAGYHTDEILDFEKGAKKYLGWSSCYRREAGSAGKDTRGIIRVHQF 280
Query: 258 --------------------------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
+AYRV++ +G L +AA+K D EAW
Sbjct: 281 NKAEMFVYCPVEQAEEMHDKLLSLEEEMLQRCGLAYRVIDTAAGDLGTSAARKFDCEAWV 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-------KIEFVHMLNATACATTRV 338
P G +REL S SNC YQ+RRL +R ++E + V LN T ATTR
Sbjct: 341 PTQGTYRELTSTSNCTTYQARRLNIRERTPDTVDEAGNVRKGRTRSVATLNGT-LATTRW 399
Query: 339 ICAILETHQTETG-VRIPDCLRKFVPAVYV 367
+ AILETHQ G VRIP+ LR ++ V
Sbjct: 400 VVAILETHQQADGSVRIPEALRPYMGGAEV 429
>gi|451332640|ref|ZP_21903229.1| Seryl-tRNA synthetase [Amycolatopsis azurea DSM 43854]
gi|449424787|gb|EMD30072.1| Seryl-tRNA synthetase [Amycolatopsis azurea DSM 43854]
Length = 396
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 171/372 (45%), Gaps = 77/372 (20%)
Query: 45 QFRHKADNFNKFKNLCSKVIG---EKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIV 101
Q +A K K+L ++V E+ +A E + N +HP P ED+ ++
Sbjct: 37 QGDERAALLAKAKDLAAQVKAAEVEQTEASEEFEQLHRVVPNLVHPDAP-EGGEDDYVVL 95
Query: 102 RTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYA 156
+ G+ KK+ H++L + +D E GA V+G R YFL G LQ+GL+ A
Sbjct: 96 KHVGEP---KKFDFTPKDHLELCEGLGALDMERGAKVSGSRFYFLTGIGAQLQLGLLNMA 152
Query: 157 LSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKY 216
+++ G+TP+ TP +R E+M L E+Y++ +D DD Y
Sbjct: 153 IAQATANGFTPMITPTLVRPEIMAGTGFLGAHSSEVYRL-------------RD--DDLY 197
Query: 217 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------------- 254
L+ TSE P+ H D L P RY G S+C+R+E
Sbjct: 198 LVGTSEVPLAGYHADEILDLGKGPKRYAGWSSCYRREAGSYGKDTRGIIRVHQFDKVEMF 257
Query: 255 ----------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAF 291
L K + YRV++ +G L +A +K D EAW P +
Sbjct: 258 VYTRPEDAEAEHARLLDWEEQMLAKIEVPYRVIDTATGDLGTSAYRKFDCEAWVPSQETY 317
Query: 292 RELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG 351
REL S SNC +Q+RRL +RY + + + + V LN T ATTR I AILE HQ E G
Sbjct: 318 RELTSTSNCTTFQARRLGIRY---RDDDGRPQTVATLNGT-LATTRWIVAILENHQLEDG 373
Query: 352 -VRIPDCLRKFV 362
VR+P+ LR F+
Sbjct: 374 SVRVPEALRPFL 385
>gi|420157477|ref|ZP_14664311.1| serine--tRNA ligase [Clostridium sp. MSTE9]
gi|394756183|gb|EJF39308.1| serine--tRNA ligase [Clostridium sp. MSTE9]
Length = 430
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 188/412 (45%), Gaps = 73/412 (17%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+L +D+ R G+ E ++ Q K + ++ K ++ + K + K K+
Sbjct: 32 ILQIDVDRRRVTGETEALKAQQNADTKQIPILRKEGKDTTELMAQLKKLSDQIKEKDAQL 91
Query: 62 KVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVR-----TKGDTEVRKKYSHV 116
+ EK + G TLP N VP+ ++ EN +R T+ D E + +H
Sbjct: 92 SELEEKQR-----GLLLTLP-NIPAADVPLGKDDTENKELRRWHEPTQFDFEPK---AHW 142
Query: 117 DLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 176
DL + +D E A V G R +F KG L+ ++ + L+ IE GYT ++ PF + +
Sbjct: 143 DLGKELGILDPETAAKVTGARFHFYKGLGARLERAIINFFLNTHIENGYTEVFPPFMVNR 202
Query: 177 EVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPE 236
M QL +F+ + Y+VI KD +D +LI T+E P+ +HR L
Sbjct: 203 ASMTGTGQLPKFEMDAYRVIN-----------KDTAEDYFLIPTAEVPVTNMHRSEILEG 251
Query: 237 ASLPIRYLGVSTCFRQE--------------------DLTK------------------- 257
ASLPI+Y S CFR E +L K
Sbjct: 252 ASLPIKYCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFADPANSYQELESLTNDAE 311
Query: 258 ------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVR 311
+ YRVV + +G L ++AK D+E W P + E+ SCSN D+Q+RR +R
Sbjct: 312 RVLQLLGLPYRVVCLSTGDLGFSSAKTYDIEVWMPSYNRYVEISSCSNFEDFQARRAQIR 371
Query: 312 YGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+ T++ +K + VH LN + A R + AILE +Q E G + IP+ LR F+
Sbjct: 372 FKATQR--DKAQLVHTLNGSGVAVGRTVAAILENYQNEDGSITIPEVLRPFM 421
>gi|220911065|ref|YP_002486374.1| seryl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
gi|254783002|sp|B8H9Q1.1|SYS_ARTCA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|219857943|gb|ACL38285.1| seryl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
Length = 426
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 192/431 (44%), Gaps = 96/431 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI----GEKMKA 70
+P+K R +Q+ R + +VD +I D R + +N +N+ K + GE+ +A
Sbjct: 10 NPDKFRASQRARGADESVVDAIISADSARRAALIRYENLRAEQNVFGKKVAQAKGEEKQA 69
Query: 71 -----KEPVGDSS------------------TLPGNHLHPSVPVSNNEDENGIVRTKGDT 107
KE T+P N + VP ED+ +V+T G
Sbjct: 70 LLAEVKELANSVKAASAEADAAQTKQEELLRTVP-NLVEDGVP-EGGEDDYVVVKTVGTP 127
Query: 108 EVRKKYS---HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKG 164
+ H+++ +I +D E GA V+G R YFL+G L++ L+Q A+ + IE G
Sbjct: 128 REFPDFEPKDHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALLQMAMEQAIEAG 187
Query: 165 YTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQP 224
+ P+ TP +R E MQ + D E+Y++ DD YL+ TSE
Sbjct: 188 FIPMITPTLVRPETMQGTGFDVKHDAEIYRLAE---------------DDLYLVGTSEVA 232
Query: 225 ICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------------------ 254
+ H D L ++ PIRY G S+C+R+E
Sbjct: 233 LAGYHADEILDFSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEA 292
Query: 255 --------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSN 299
L K + YRV++ +G L ++AA+K D EAW P GA+REL S SN
Sbjct: 293 AAEHQRLLAWEEEMLAKCELPYRVIDTAAGDLGNSAARKYDCEAWVPTQGAYRELTSTSN 352
Query: 300 CLDYQSRRLLV--RYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPD 356
C +Q+RRL + R + + + V LN T ATTR I A+LE HQ G V +P
Sbjct: 353 CTTFQARRLNIRERAVNAEGVAKGTRAVATLNGT-LATTRWIVALLEHHQNADGSVNVPK 411
Query: 357 CLRKFVPAVYV 367
L+K++ + V
Sbjct: 412 ALQKYLGGLEV 422
>gi|336325083|ref|YP_004605049.1| seryl-tRNA synthetase [Corynebacterium resistens DSM 45100]
gi|336101065|gb|AEI08885.1| Seryl-tRNA synthetase [Corynebacterium resistens DSM 45100]
Length = 424
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 193/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR +Q+ R ++ LVD+++E D + R+ AD + S
Sbjct: 1 MIDLKLLRE----NPDVVRASQRTRGEDPALVDQLLEADARRREAISAADAARAEQKAFS 56
Query: 62 KVIGEKMK------------------------------AKEPVGDSSTLPGNHLHPSVPV 91
K +G++M+ A++ V D N + P
Sbjct: 57 KSMGQQMRTASDEEKAALREQGKAKAEAVKAVEAKQAEAEQAVHDLQMKLSNVVEEGAP- 115
Query: 92 SNNEDENGIVRTKGD-TEVR-KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+ ED+ ++ G+ TE + H++L + +D + G V+G R YFL G LQ
Sbjct: 116 AGGEDDFVVLEHVGEPTEFDFEPKDHLELGESLGLIDMKRGTKVSGARFYFLTGDGALLQ 175
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+G++Q A K +E+G+T + P +R EVM L +E+Y +
Sbjct: 176 LGMLQLAAQKAVERGFTLMIPPVLVRPEVMAGTGFLGAHADEIYHL-------------- 221
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
E DD YL+ TSE + H D + P+RY G S+CFR+E
Sbjct: 222 -EEDDLYLVGTSEVALAGYHSDEIIDLNKGPVRYAGWSSCFRREAGSYGKDTRGIIRVHQ 280
Query: 254 ---------------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAW 284
D+ +I YRV+++ G L +AA+K D EAW
Sbjct: 281 FDKLEMFVYCKPEEAQSIHQELLQMEKDMLAAIEVPYRVIDVAGGDLGSSAARKYDTEAW 340
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P +REL S SNC +Q+RRL RY + + K + LN T ATTR + AILE
Sbjct: 341 VPTQNTYRELTSTSNCTTFQARRLKTRY---RDADGKAQTAATLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
+Q G VR+P L+ FV
Sbjct: 397 NNQQADGSVRVPKALQPFV 415
>gi|171186061|ref|YP_001794980.1| seryl-tRNA synthetase [Pyrobaculum neutrophilum V24Sta]
gi|229470723|sp|B1Y9Y4.1|SYS_THENV RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|170935273|gb|ACB40534.1| seryl-tRNA synthetase [Pyrobaculum neutrophilum V24Sta]
Length = 447
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 188/437 (43%), Gaps = 107/437 (24%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSK--VIGEKMKAKE 72
+P+ VRK R +V LVD+ IE D +WRQ + + D + N S+ + +E
Sbjct: 12 NPDHVRKVLAARRLDVSLVDRFIELDGRWRQLKREVDELRRSYNQLSREGARAPPDRRRE 71
Query: 73 PVGDSSTLPG------------------------NHLHPSVPVSNNEDENGIVRTKGDTE 108
V + L N +H SVPV ++ VR G
Sbjct: 72 IVEKARELAARLEKVEKEMEAVEREREELLWSFPNLIHDSVPVCPEGVDSVPVRHWGTIR 131
Query: 109 VRKKYS----------------HVDLITMIDGV-DSEAGAIVAGGRGYFLKGPAVCLQVG 151
V K + H D+ ++ G+ D+ VAG R Y+L V L
Sbjct: 132 VVKGAAAPEGVEYVVVEKPPVGHADMAEVVLGMADTLKAGEVAGSRFYYLFDDLVWLDFA 191
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
L YAL + ++G+ P+ P+ ++ +V++ V F + +YK+ G
Sbjct: 192 LAMYALDRLAQQGFRPVVPPYMLKFDVIRRVLDFDTFKDAIYKIEG-------------- 237
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------ 253
+D YLIAT+E I A L E LP+ ++G S CFR+E
Sbjct: 238 -EDLYLIATAEHGIAAYLHKRELVEEELPLLFVGWSPCFRKEAGAGNRDLKGIFRVHIFH 296
Query: 254 ------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWFP 286
++TK+ + YRVVNI + L AAKK D+EAW+P
Sbjct: 297 KVEQFVFSLPEDSWKWHEEITKNTESLIRDLGLPYRVVNICAHDLGAPAAKKYDIEAWYP 356
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G +REL SCSN D+QS RL +R + + EFVH LN T ATTR I AILE
Sbjct: 357 AQGMYRELASCSNVTDWQSYRLGIR---VTRKGMRREFVHTLNCTGLATTRTITAILENF 413
Query: 347 QTETG-VRIPDCLRKFV 362
Q E G V IP LR ++
Sbjct: 414 QREDGAVEIPKALRPYL 430
>gi|297564185|ref|YP_003683158.1| seryl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848634|gb|ADH70652.1| seryl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 436
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 139/294 (47%), Gaps = 65/294 (22%)
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFM 174
H++L M+ +D E GA V+G R YFL G L++ L+ A+++ ++ G+TP+ P +
Sbjct: 150 HLELGEMLGAIDMERGAKVSGARFYFLTGVGAQLELALLNMAMNQAVQAGFTPMIPPVLV 209
Query: 175 RKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL 234
R E M+ L +E+Y + DD YL+ TSE P+ H L
Sbjct: 210 RPETMEGTGFLGAHADEVYHLPA---------------DDLYLVGTSEVPLAGYHSGEIL 254
Query: 235 PEASLPIRYLGVSTCFRQEDLTKS------------------------------------ 258
P +LP RY+G S CFR+E +
Sbjct: 255 PADALPNRYIGWSPCFRREAGSYGKDTRGIIRVHQFNKVEMFVYTHPDQAHEEHKRLLAW 314
Query: 259 ---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
+ YRVV+I G L +AA+K D EAW P +REL S SNC ++Q+RRL
Sbjct: 315 EREMLDKLELPYRVVDIAGGDLGTSAARKYDCEAWVPTQETYRELTSTSNCTEFQARRLN 374
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
VR+ + + K F LN T ATTR I AILE HQ E G V +P+ LR ++
Sbjct: 375 VRF---RDEDGKPRFAATLNGT-LATTRWIVAILENHQREDGSVVVPEALRPYL 424
>gi|296137899|ref|YP_003645142.1| seryl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
gi|296026033|gb|ADG76803.1| seryl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
Length = 417
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 183/433 (42%), Gaps = 95/433 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D+ L R +P+ VR +Q+ R ++ LVD ++E D R ADN S
Sbjct: 1 MIDVKLLRE----NPDLVRASQRARGEDAALVDALLEADAHRRAAVLAADNLRAEHKTSS 56
Query: 62 KVIG--------------------------EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K IG E+ +A E +++ GN + VP +
Sbjct: 57 KSIGKAAPEERPALVAAAGELAAKVKEAEAEQARADEVFDETARKIGNVIIEGVPAGGED 116
Query: 96 DENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
D + E+ H++L + +D E GA V+G R YF+ G Q+ L+Q
Sbjct: 117 DFEVLEHVGTIPEITDPKDHLELAEGLGLLDMERGAKVSGSRFYFMTGHGALFQMALLQL 176
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
A+ K + G+T + P ++ E+M L +E+Y++ E DD
Sbjct: 177 AVQKAVAHGFTLMIPPVLVKPEIMGGTGFLGAHADEIYRL---------------EADDL 221
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------- 253
YL+ TSE P+ H + PIRY S+CFR+E
Sbjct: 222 YLVGTSEVPLAGYHMGEIIDLNDGPIRYAAQSSCFRREAGSYGKDTRGIIRVHQFDKIEM 281
Query: 254 -----------------DLTK------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
D K + YRV+++ +G L +AA+K D EAW P
Sbjct: 282 FVYCKPEDAEAEHQRLLDFEKEMLAAVEVPYRVIDVAAGDLGSSAARKFDCEAWVPSQER 341
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL VRY + + + + LN T ATTR + AI E HQ
Sbjct: 342 YRELTSTSNCTTFQARRLGVRY---RDEDGRPQIAATLNGT-LATTRWLVAIWENHQQPD 397
Query: 351 G-VRIPDCLRKFV 362
G VR+P L+ F+
Sbjct: 398 GSVRVPAALQPFL 410
>gi|225016772|ref|ZP_03705964.1| hypothetical protein CLOSTMETH_00684 [Clostridium methylpentosum
DSM 5476]
gi|224950440|gb|EEG31649.1| hypothetical protein CLOSTMETH_00684 [Clostridium methylpentosum
DSM 5476]
Length = 425
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 195/441 (44%), Gaps = 104/441 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNV-ELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
+LD+ L RT D E V+K +DR KN+ E +D+++E D + R+ + D +N
Sbjct: 1 MLDIKLIRT----DAEMVKKAMRDRNKNMDETIDEILEIDRERREISTQKDAMKAEQNKV 56
Query: 61 SKVIG-------------EKMKA-----KEPVGDSSTLPG----------NHLHPSVPVS 92
SK I E MK KE +S L N HPSVP+
Sbjct: 57 SKQIPILKKENGNVEEVMENMKKLSDEIKELNAKTSELEAKQKDLLLRIPNIPHPSVPIG 116
Query: 93 NNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+ED+N +R G D E + +H DL + +D + A V G R +F KG
Sbjct: 117 KSEDDNQEIRKFGTPTTFDFEPK---AHWDLGKDLGILDPDTAAKVTGARFHFYKGAGAR 173
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L+ ++ + L + GYT ++ PF + + M QL +F+E+ +++
Sbjct: 174 LERAVINFYLDTHTKNGYTEVFPPFMVNRASMTGTGQLPKFEEDAFRLANM--------- 224
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------- 253
D +LI T+E P+ ++RD + +P+++ S CFR E
Sbjct: 225 ------DYFLIPTAEVPVTNMYRDEIIDGDKIPVKFCAYSACFRAEAGSAGRDTRGLIRQ 278
Query: 254 ------DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLE 282
+L K + YRVV + +G L ++AK D+E
Sbjct: 279 HQFNKVELVKFADPENSYEELEKLTADAERVLQLLELPYRVVCLSTGDLGFSSAKTYDIE 338
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
W P ++E+ SCSN D+Q+RR +++ ++ K EK + VH LN + A R + AI
Sbjct: 339 VWLPSYNNYKEISSCSNFEDFQARRANIKFKKSAK--EKAQLVHTLNGSGVAIGRTVAAI 396
Query: 343 LETHQTETG-VRIPDCLRKFV 362
LE +Q E G V +P L ++
Sbjct: 397 LENYQNEDGSVTVPKVLVPYM 417
>gi|403235089|ref|ZP_10913675.1| seryl-tRNA ligase [Bacillus sp. 10403023]
Length = 428
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 157/329 (47%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H SVP ED+N +VR G ++++S H D+ + + +D E+ A V G R F
Sbjct: 109 HDSVPKGLTEDDNVLVRQWG---YKQEFSFEPKPHWDVASELGILDFESAAKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + + IE+ GY + P+ + ++ + QL +F+E+L+K+ GK
Sbjct: 166 YKGLGARLERALISFMIDLHIEEHGYEEIIPPYIVNRDSLTATGQLPKFEEDLFKIEGK- 224
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
D +LI T+E P+ +HRD L LPI Y+G S+CFR E
Sbjct: 225 --------------DYFLIPTAEVPLINIHRDDILTNDQLPINYVGHSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + Y+V+N+ G L
Sbjct: 271 DTRGLIRQHQFNKVELVKITKPEESYNELEKLTNQAEKVLQLLGLPYQVLNMCMGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P +RE+ SCSN D+Q+RR +R+ ++ K+EF H LN + A
Sbjct: 331 AAKKYDVEVWMPSYNTYREISSCSNLEDFQARRANIRF--RREAGGKLEFPHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G V IP+ LR ++
Sbjct: 389 VGRTVAAILENYQQEDGSVIIPEVLRPYM 417
>gi|315446522|ref|YP_004079401.1| seryl-tRNA synthetase [Mycobacterium gilvum Spyr1]
gi|315264825|gb|ADU01567.1| seryl-tRNA synthetase [Mycobacterium gilvum Spyr1]
Length = 419
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 180/416 (43%), Gaps = 91/416 (21%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG--------- 65
+P+ VR +Q+ R ++ LVD + E D R ADN + SK IG
Sbjct: 10 NPDAVRASQQARGEDPGLVDALAEADSARRAAISAADNLRAEQKSASKAIGKASPDERPA 69
Query: 66 ---------EKMKAKEPVGDSSTLPGNHLHPSVP-------VSNNEDENGIVRTKGDTEV 109
EK+KA E ++ H ++ + ED+ ++ T G+ V
Sbjct: 70 LLAAAKELSEKVKAAEADQAAAEAAYTAAHMAISNVIIDGVPAGGEDDFVVLDTVGEPRV 129
Query: 110 -RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPL 168
H++L + +D E GA V+G R YFL G LQ+GL Q A+ E G+T +
Sbjct: 130 IPDAKDHLELGEALGLIDMERGAKVSGSRFYFLTGFGALLQLGLFQLAVRTATENGFTLM 189
Query: 169 YTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAV 228
P +R E+M+ L +E+Y + DD YL+ TSE P+
Sbjct: 190 IPPVLVRPEIMRGTGFLGAHADEIYHLAE---------------DDLYLVGTSEVPLAGY 234
Query: 229 HRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------------------------ 258
H D L + P+RY G S+CFR+E +
Sbjct: 235 HSDEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEEAEAEH 294
Query: 259 ---------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDY 303
+ YRV++I +G L +AA+K D EAW P +REL S SNC +
Sbjct: 295 DRLLGWQRQLLAAIEVPYRVIDIAAGDLGSSAARKYDCEAWVPTQQTYRELTSTSNCTTF 354
Query: 304 QSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCL 358
Q+RRL VRY + N + + LN T ATTR + AILE HQ G VRIP+ L
Sbjct: 355 QARRLAVRY---RDENGRPQTAATLNGT-LATTRWLVAILENHQQPDGSVRIPEAL 406
>gi|148907095|gb|ABR16691.1| unknown [Picea sitchensis]
Length = 542
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 174/353 (49%), Gaps = 78/353 (22%)
Query: 76 DSSTLPGNHLHPSVPVSNNEDEN--GIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIV 133
++ ++P N HP VP+ + + +V TK + + K HVDL +D D +A A V
Sbjct: 200 EAQSIP-NSTHPDVPIGGEDAASLRKMVGTKCEFDFPVK-DHVDLGQELDLFDFDAAAEV 257
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEEL 192
+G + Y+LK AV L++GL+ +ALS+ +++GYTPL TP +R V+++ Q + ++
Sbjct: 258 SGTKFYYLKNEAVLLEIGLINWALSELVKRGYTPLSTPDIVRSSVLEKCGFQPRALNTQV 317
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR- 251
Y + G D+ L T+E P+ ++ D + ++ LP++++ S CFR
Sbjct: 318 YSIEGT---------------DQCLAGTAEIPVGGMYMDQIIDDSLLPLKFVAFSHCFRT 362
Query: 252 ------------------------------------------QEDLTKSIA--YRVVNIV 267
+E L S+ ++ +++
Sbjct: 363 EAGAAGYATRGLYRVHQFSKVEMFIICRPEDSDSFHEELISIEESLFSSLGLHFKTLDMP 422
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG------------QT 315
S L A +K D+EAW PG G + E+ S SNC DYQSRRL +RY +
Sbjct: 423 SEDLGAPAYRKYDVEAWMPGLGRYGEISSSSNCTDYQSRRLNIRYRPAIEESNPSTVVKP 482
Query: 316 KKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
KK +++FVH LNATACA R+I +ILE Q E G + IP+ L+ F+ V V
Sbjct: 483 KKRKGQLKFVHTLNATACAVPRMIISILENFQQEDGSIIIPEVLQPFMGGVKV 535
>gi|424859269|ref|ZP_18283283.1| seryl-tRNA synthetase [Rhodococcus opacus PD630]
gi|356661778|gb|EHI42089.1| seryl-tRNA synthetase [Rhodococcus opacus PD630]
Length = 418
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 184/435 (42%), Gaps = 98/435 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R +P+ VR++Q+ R ++ LVD ++E D R DN +
Sbjct: 1 MIDLKFLRE----NPDAVRESQRTRGEDPALVDALLEADASRRAAVLAGDNLRAEQKAFG 56
Query: 62 KVIG--------------------------EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K +G E+ +A+ + + N + P + E
Sbjct: 57 KKVGQASPEERPALLEGSKELAAKVKQAEAEQHEAQAALDAAHRAISNVVQEGAP-AGGE 115
Query: 96 DENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
D+ + T G+ T + H++L + +D E GA V+G R YFL G LQ+G++
Sbjct: 116 DDFVTLETVGEIPTFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGFGAMLQLGML 175
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
Q A K + G+ + P +R E+M L +E+Y + D
Sbjct: 176 QLAAQKAMANGFQMMIPPVLVRPEIMAGTGFLGAHADEIYHLAD---------------D 220
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------------- 253
D YL+ TSE P+ H L A RY G STCFR+E
Sbjct: 221 DLYLVGTSEVPLAGYHSGEILDLADGAKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKV 280
Query: 254 -----------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGS 288
D+ +I YRV+++ G L +AA+K D EAW P
Sbjct: 281 EMFTYCKPEDADAEHQRLLAWERDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQ 340
Query: 289 GAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQT 348
A+REL S SNC +Q+RRL VRY + N K + LN T ATTR I AILE HQ
Sbjct: 341 QAYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT-LATTRWIVAILENHQQ 396
Query: 349 ETG-VRIPDCLRKFV 362
G VR+P+ L FV
Sbjct: 397 SDGTVRVPEALVPFV 411
>gi|253577336|ref|ZP_04854653.1| seryl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843236|gb|EES71267.1| seryl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 428
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 192/440 (43%), Gaps = 101/440 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ + R E +V + K+R K++EL+ D K R+ +++ +N S
Sbjct: 1 MLDVKILRNEYA----RVEEALKNRGKSLELISGFAPLDEKRRELLQESEALKNRRNTVS 56
Query: 62 KVIGEKMKAKE----------PVGDS--------STLPG----------NHLHPSVPVSN 93
+ ++ K KE VGD TL N H SVPV
Sbjct: 57 AEVAKRKKNKEDADELIVEMREVGDRIKELDEEVRTLEAQIDQLMLSIPNIPHESVPVGA 116
Query: 94 NEDENGIVRTKGDTEVRK----KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+E++N VR +E RK +H D+ + +D EA A V G R F KG L+
Sbjct: 117 SEEDNVEVRRW--SEPRKFDFTPKAHWDIAADLGILDFEAAAKVTGSRFTFYKGLGARLE 174
Query: 150 VGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
L+ + + E GY + P+ + ++ + QL +F+E+L+K+ G
Sbjct: 175 RALINFMMDLHSNEHGYEEMLPPYIVNQDSLYGTGQLPKFEEDLFKLTGS---------- 224
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
+D YLI T+E P+ HRD L LP Y+ S+CFR E
Sbjct: 225 ----NDYYLIPTAEVPVTNYHRDEILNAEDLPRYYVAYSSCFRSEAGAAGRDTRGLIRQH 280
Query: 254 ------------------DLTK------------SIAYRVVNIVSGALNHAAAKKLDLEA 283
+L K + YRV+ + +G + AAK DLE
Sbjct: 281 QFNKVEMIKIVHPDTSYDELEKMTENAERVLQLLGLPYRVLALCTGDMGFTAAKTYDLEV 340
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
W P SG +RE+ SCSN D+Q+RR +R+ K K EFVH LN + A R + AIL
Sbjct: 341 WLPESGVYREISSCSNVEDFQARRANIRFRPEPKA--KPEFVHTLNGSGLAVGRTVAAIL 398
Query: 344 ETHQTETG-VRIPDCLRKFV 362
E +Q E G V IP+ LR ++
Sbjct: 399 ENYQQEDGSVVIPEVLRPYM 418
>gi|325961721|ref|YP_004239627.1| seryl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
gi|323467808|gb|ADX71493.1| seryl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
Length = 427
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 190/431 (44%), Gaps = 96/431 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF----NKFKNLCSKVIGEKMKA 70
+P+K R +Q+ R + +VD +I D R + +N N F ++ G++ KA
Sbjct: 11 NPDKYRASQRARRADESVVDAIISADSARRAALIRFENLRAEQNAFGKKVAQAKGDEKKA 70
Query: 71 -----KEPVGDSS------------------TLPGNHLHPSVPVSNNEDENGIVRTKGDT 107
KE T+P N + VP ED+ +V+T G
Sbjct: 71 LLAEVKELANSVKAASAEADAAQTKQEELLRTIP-NLIEDGVP-EGGEDDYVVVKTVGTP 128
Query: 108 EVRKKY---SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKG 164
+ H+++ +I +D E GA V+G R YFL+G L++ L+Q A+ + IE G
Sbjct: 129 REFPDFEPKDHLEIGELIGAIDMERGAKVSGARFYFLRGVGARLEMALLQMAMDQAIEAG 188
Query: 165 YTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQP 224
+ P+ TP +R E MQ + D E+Y++ DD YL+ TSE
Sbjct: 189 FIPMITPTLVRPETMQGTGFDVKHDAEIYRLAE---------------DDLYLVGTSEVA 233
Query: 225 ICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------------------ 254
+ H D L ++ PIRY G S+C+R+E
Sbjct: 234 LAGYHADEILDFSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEA 293
Query: 255 --------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSN 299
L K + YRV++ +G L +AA+K D EAW P GA+REL S SN
Sbjct: 294 AAEHQRLLAWEEEMLAKCELPYRVIDTAAGDLGMSAARKYDCEAWVPTQGAYRELTSTSN 353
Query: 300 CLDYQSRRLLVRYGQT--KKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPD 356
C +Q+RRL +R + + + V LN T ATTR I A+LE HQ G V +P
Sbjct: 354 CTTFQARRLNIRERAVNPEGVAKGTRAVATLNGT-LATTRWIVALLEHHQNADGSVNVPK 412
Query: 357 CLRKFVPAVYV 367
L+K++ + V
Sbjct: 413 ALQKYLGGLEV 423
>gi|16226853|gb|AAL16281.1|AF428351_1 At1g11870/F12F1_29 [Arabidopsis thaliana]
Length = 512
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 169/345 (48%), Gaps = 81/345 (23%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N HP VPV ED + I + G +++S H+ L +D +D ++ A V+G +
Sbjct: 179 NMTHPDVPV-GGEDSSAIRQEVGSP---REFSFPIKDHLQLGKDLDLIDFDSAAEVSGSK 234
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE-ELYKVI 196
++LK AV L++ L+ + LS+ ++KGYTPL TP +R ++++ + D ++Y +
Sbjct: 235 FFYLKNEAVLLEMALLNWTLSQVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSID 294
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR----- 251
G D+ LI T+E P+ +H DS L E++LP++Y+ S CFR
Sbjct: 295 GT---------------DQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGA 339
Query: 252 --------------------------------------QEDLTKSIA--YRVVNIVSGAL 271
+EDL S+ ++ +++ + L
Sbjct: 340 AGAATKGLYRVHQFSKAEMFVICQPEDSESFHQELIQIEEDLFTSLGLHFKTLDMATADL 399
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------KMN-EK 321
A +K D+EAW PG G F E+ S SNC D QSRRL +RY ++ K N
Sbjct: 400 GAPAYRKFDIEAWMPGLGRFGEISSASNCTDCQSRRLGIRYRPSEPPQTGPKKGKANLPA 459
Query: 322 IEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
+FVH LNATACA R++ +LE +Q E G V IP+ LR F+ +
Sbjct: 460 TKFVHTLNATACAVPRMMVCLLENYQQEDGSVVIPEPLRPFMGGI 504
>gi|260891941|ref|YP_003238038.1| seryl-tRNA synthetase [Ammonifex degensii KC4]
gi|260864082|gb|ACX51188.1| seryl-tRNA synthetase [Ammonifex degensii KC4]
Length = 427
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 191/444 (43%), Gaps = 104/444 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL R + PE V++ + R LVD+++ D +WR+ N S
Sbjct: 1 MLDLKFIRRQ----PEVVKEALRRRGYPENLVDELLAVDARWREKLTYLQELRSEHNRVS 56
Query: 62 KVIGEKMKA--------------KEPVGDSSTLPG--------------NHLHPSVPVSN 93
+ I + +A + + D + G N HPSVP
Sbjct: 57 EEIARRKQAGDEAVELIAAMRELSDRIEDLAKEVGALERELQERLLEIPNIPHPSVPYGE 116
Query: 94 NEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
+ ++N VR G+ +++S H ++ + +D G VAG R F +G L
Sbjct: 117 DAEDNVEVRRWGEP---RRFSFPPRPHWEIGEITGVLDFARGVKVAGTRFVFYRGLGAAL 173
Query: 149 QVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
+ L+ + L E GY ++ PF + +E M QL +F E+++KV G
Sbjct: 174 ERALINFMLDLHTREHGYEEVFPPFLVNRESMVGTGQLPKFAEDMFKVEG---------- 223
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR---------------- 251
+D YLI T+E P+ +HR+ L LP++Y+ S CFR
Sbjct: 224 -----EDFYLIPTAEVPVTNLHREEILDGGQLPLKYVAYSACFRAEAGAAGRETRGLIRQ 278
Query: 252 -----------------QEDLTKSIA------------YRVVNIVSGALNHAAAKKLDLE 282
+E+L K +A YRVV + +G L AAAK D+E
Sbjct: 279 HQFNKVELVKFCRPEQSEEELEKLVADAEEVLKRLGLPYRVVVLCTGDLGFAAAKTYDIE 338
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
W P GA++E+ SCSN D+Q+RR +RY K K FVH LN + A R + AI
Sbjct: 339 VWLPSYGAYKEISSCSNFGDFQARRANIRYRPHPKA--KAAFVHTLNGSGLAVGRTVAAI 396
Query: 343 LETHQTETG-VRIPDCLRKFVPAV 365
LE +Q E G V IP LR ++ V
Sbjct: 397 LENYQEEDGSVVIPPALRPYMGGV 420
>gi|326329349|ref|ZP_08195674.1| serine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
gi|325952924|gb|EGD44939.1| serine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
Length = 423
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 138/294 (46%), Gaps = 65/294 (22%)
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFM 174
HV+L M+ +D E GA V+G R YFL G L+ L+ A+ + E G+T + P +
Sbjct: 139 HVELGKMLGAIDLERGAKVSGSRFYFLTGVGAELEFALINLAMEQAREAGFTQVIAPALV 198
Query: 175 RKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL 234
R E M+ L Q D+ +YK+ E DD YL+ TSE P+ A H D L
Sbjct: 199 RPEAMEGTGFLDQVDDGVYKI---------------EDDDLYLVGTSEVPMAAYHADEIL 243
Query: 235 PEASLPIRYLGVSTCFRQE-----DLTKSI------------------------------ 259
+LP RY S+CFR+E TK I
Sbjct: 244 DPETLPRRYAAFSSCFRKEAGSAGKDTKGIIRVHQFEKVEMFVYTTVEESYAEHQRLLEW 303
Query: 260 ----------AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
AY+V+++ +G L +A +K D EAW P G +REL S SNC +Q+RRL
Sbjct: 304 EKAFLDKLELAYQVIDVAAGDLGPSALRKFDCEAWIPTQGKYRELTSASNCTTFQARRLD 363
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+R ++ V LN T A TR I A+LETHQ G VR+P L+K++
Sbjct: 364 IR----QRTESGTTPVATLNGTLTAITRAIVAVLETHQQADGSVRVPKALQKWL 413
>gi|148271694|ref|YP_001221255.1| seryl-tRNA synthetase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|166219864|sp|A5CNA2.1|SYS_CLAM3 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|147829624|emb|CAN00539.1| serS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 426
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 197/436 (45%), Gaps = 110/436 (25%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIEND------------LKWRQFRH-----KADNFNK--- 55
P+ V +Q+ R +VE+VD+ + D L+ Q H KAD +K
Sbjct: 11 PDLVIASQELRGASVEVVDQAVAADSERRRAVTEFEGLRAEQNAHGKLVAKADKADKPRL 70
Query: 56 ---FKNLCSKVIGEKMKAKEPVGDSSTLPGNHLHPSVPV----SNNEDENGIVRTKGDTE 108
+ L ++V + +A+E +S+ P++ + + ED+ +VR E
Sbjct: 71 IAEVQELKARVTAAQERAQE--AESALDEAMRRIPNIVIDGVPAGGEDDWALVR-----E 123
Query: 109 VRKKYS-------HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWI 161
V K S H+++ ++D +D GA V+G R ++LKG L++ L+ + L++ +
Sbjct: 124 VGAKPSFDFAPRDHLEIGEILDAIDMGRGAKVSGARFHYLKGIGARLEIALMNFGLARAL 183
Query: 162 EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
E G PL TP ++ E+M L +E+Y + + DD YL TS
Sbjct: 184 EAGLVPLITPTLVKPEIMAGTGFLGAHADEVYHL---------------DDDDLYLTGTS 228
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------------- 253
E + H D L A PIRY G STC+R+E
Sbjct: 229 EVALAGYHADEILDLAQGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQKLEMFSYVDP 288
Query: 254 -------------------DLTKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFREL 294
DL ++YRV++ +G L +AA+K D+EAW P A+REL
Sbjct: 289 ADAEAEHERLLAMQERMMQDL--GLSYRVIDTAAGDLGSSAARKYDVEAWIPTQDAYREL 346
Query: 295 VSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VR 353
S SNC +Q+RRL R+ + + + V LN T ATTR I AILETHQ G VR
Sbjct: 347 TSTSNCTTFQARRLGTRF---RGEDGRTSPVATLNGT-LATTRWIVAILETHQQADGSVR 402
Query: 354 IPDCLRKFVPAVYVNE 369
+P+ LR ++ + V E
Sbjct: 403 VPEALRPYLGGLEVLE 418
>gi|297543541|ref|YP_003675843.1| seryl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841316|gb|ADH59832.1| seryl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 423
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 159/335 (47%), Gaps = 71/335 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRK----KYSHVDLITMIDGVDSEAGAIVA 134
T+P N H SVP+ +++++N VR G E RK SH ++ +D +D EA A V
Sbjct: 102 TIP-NIPHESVPIGDSDEDNVEVRRWG--EPRKFDFEPKSHWEIGEELDILDFEAAARVT 158
Query: 135 GGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELY 193
G R F KG L+ L+ + L +EK GYT ++ PF + + M QL +F+E+ +
Sbjct: 159 GSRFTFYKGLGARLERALINFMLDLHVEKHGYTEVFPPFIVHRRSMLGTGQLPKFEEDAF 218
Query: 194 KVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ- 252
KV G D +LI T+E P+ ++RD+ + LPI + S CFRQ
Sbjct: 219 KVYGT---------------DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQE 263
Query: 253 -----------------------------------EDLTK---------SIAYRVVNIVS 268
E +TK + YRVV I +
Sbjct: 264 AGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELEKMTKDAEEVLQLLGLPYRVVAICT 323
Query: 269 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
G L A+KK D+E W P G + E+ SCSNC D+Q+RR ++Y K K ++VH L
Sbjct: 324 GDLGFTASKKYDIEVWMPSYGRYVEVSSCSNCEDFQARRANIKY--RPKDGSKAQYVHTL 381
Query: 329 NATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
N + A R AILE +Q E G V IP+ LR ++
Sbjct: 382 NGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|410666400|ref|YP_006918771.1| seryl-tRNA synthetase SerS [Thermacetogenium phaeum DSM 12270]
gi|409104147|gb|AFV10272.1| seryl-tRNA synthetase SerS [Thermacetogenium phaeum DSM 12270]
Length = 425
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 191/439 (43%), Gaps = 101/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVEL-VDKVIENDLKWRQFRHKADNFNKFKNLC 60
+LDL R+ PE V+K DR NVE +D+V+ D + R +++ +N
Sbjct: 1 MLDLKFIRSH----PEVVKKALSDR--NVEFDLDQVLAWDEERRSKIAESERLKNRRNTL 54
Query: 61 SKVIGEKMKAKEPVG----------------------------DSSTLPGNHLHPSVPVS 92
S+ +G AKE + L N H SVPV
Sbjct: 55 SQEVGRLKAAKEDAAHLIEEVREISRRSKEIDRELNEIEQKLQQALLLIPNIPHESVPVG 114
Query: 93 NNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
+E N ++R +G+ + H ++ +D +D E G VAG R LKG L+
Sbjct: 115 PDEGANIVLRVEGEPPSFGFEPRPHWEIGENLDILDFERGVKVAGARFTVLKGWGARLER 174
Query: 151 GLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
LV + L E+ GYT ++ PF + + M QL +F+E+L+
Sbjct: 175 ALVNFMLDLHTEEHGYTEIFPPFLVNRATMTGTGQLPKFEEDLFYC-------------- 220
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
+D +LI T+E P+ ++ D LP LPI + + CFR E
Sbjct: 221 -NREDLFLIPTAEVPVTNLYSDEILPGEVLPIYHTAYTACFRAEAGAAGRDTRGLIRQHQ 279
Query: 254 ----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+L K +AYRVV++ +G L +AAK DLE W
Sbjct: 280 FNKVELVKFTTPEDSYLELEKLTADAEDVLRRLGLAYRVVSLSTGDLGFSAAKTYDLEVW 339
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP +G +RE+ SCSN D+Q+RR +RY + + FVH LN + A R + AILE
Sbjct: 340 FPAAGTYREISSCSNFEDFQARRANIRY--RPEAGARPRFVHTLNGSGVAVGRTVAAILE 397
Query: 345 THQTETG-VRIPDCLRKFV 362
+Q E G V +P+ LR ++
Sbjct: 398 NYQREDGSVVVPEVLRPYM 416
>gi|229818196|ref|ZP_04448478.1| hypothetical protein BIFANG_03493 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229784447|gb|EEP20561.1| hypothetical protein BIFANG_03493 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 483
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 193/439 (43%), Gaps = 100/439 (22%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIEND----LKWRQFR--------- 47
++LD+ R + V+++Q+ R ++VELVD+V+ +D R F
Sbjct: 55 LMLDIQFIREH----ADVVKESQRKRGESVELVDEVLTSDEARRAALRDFEAARAQQKEI 110
Query: 48 ----------HKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNN 94
KA + K L KV K A G+ +T N + P P +
Sbjct: 111 GKKVAAASGDDKAKLIAETKELSKKVSEYKAAADAATGEYTTAMWKLSNIVEPEAP-AGG 169
Query: 95 EDENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
ED+ +V+ GD E + H+ L + G+D E G V G R YFL+G +Q
Sbjct: 170 EDDYVVVKKVGDIRDFAAEGFEPKDHLTLGRGVAGIDMERGVKVGGSRFYFLRGAVARMQ 229
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ ++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 230 IAMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL-------------- 275
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------ 251
E DD+YL+ TSE + +H + L + P+RY G S+C+R
Sbjct: 276 REPDDQYLVGTSEVALAGMHENEILNLENGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQ 335
Query: 252 -----------QEDLTK----------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
QED K + YR+++ +G L +AA+K D EAW
Sbjct: 336 FDKVEMFVYAKQEDSYKEHEHLLAMEQEMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAW 395
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL +R + + V LN T ATTR + AI+E
Sbjct: 396 VPTQGRYRELTSTSNCTEYQARRLNIR---ERTEDGSTRAVATLNGT-LATTRWLVAIME 451
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ + G + IP +R ++
Sbjct: 452 NHQQKDGSIEIPKAMRAYM 470
>gi|408501516|ref|YP_006865435.1| seryl-tRNA synthetase [Bifidobacterium asteroides PRL2011]
gi|408466340|gb|AFU71869.1| seryl-tRNA synthetase [Bifidobacterium asteroides PRL2011]
Length = 428
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 188/424 (44%), Gaps = 96/424 (22%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRH-----------------------KADN 52
P+ VR++Q+ R ++VELVD+V++ D + R KA+
Sbjct: 11 PDVVRESQRKRGESVELVDEVLKADSERRAALQDYESRRAEQKTLGKRMGSASPDEKANL 70
Query: 53 FNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNEDENGIVRTKGD--- 106
+ K+L KV K + + + L N + P P ED+ +V+ G
Sbjct: 71 LARTKSLSDKVNACKAASDDANARYTDLMWKFSNVVEPEAP-EGGEDDYVVVKKVGTPRD 129
Query: 107 --TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKG 164
E + +H+DL + G+D G V+G R YFL+G L++ ++ A+ + +E G
Sbjct: 130 FAKEGFEPKNHLDLGVGVAGIDMRRGVKVSGSRFYFLRGDVARLEIAMLTMAVDQAMEHG 189
Query: 165 YTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQP 224
+ P TP +R EVM L +E+Y++ E DD+YL+ TSE
Sbjct: 190 FIPTITPTLVRPEVMAGTGFLNAHADEIYRL--------------REPDDQYLVGTSEVS 235
Query: 225 ICAVHRDSWLPEASLPIRYLGVSTCFR--------------------------------- 251
+ +H D L + P+RY G S+C+R
Sbjct: 236 LAGMHEDEILDLSKGPLRYCGWSSCYRREAGSAGKDTMGIIRVHQFDKVEMFVYCKQEDS 295
Query: 252 -----------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSN 299
QE L K + YR+++ +G L +AA+K D EAW P G +REL S SN
Sbjct: 296 RDQHQQLLAMEQEMLAKVDVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355
Query: 300 CLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCL 358
C +YQ+RRL R + + V LN T ATTR + AILE HQ G + IP+ +
Sbjct: 356 CTEYQARRLNER---ERLEDGSTRPVSTLNGT-LATTRWLVAILENHQNADGSIVIPEAM 411
Query: 359 RKFV 362
R +V
Sbjct: 412 RSYV 415
>gi|269120640|ref|YP_003308817.1| seryl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
gi|268614518|gb|ACZ08886.1| seryl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
Length = 423
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 200/445 (44%), Gaps = 108/445 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D+ R + E +RK+ KDR N +L D +++ D R+ +A+ K KN S
Sbjct: 1 MIDMKFIRE----NTEIIRKSLKDRNSNFDL-DGLLKADEARRELLQEAETLKKEKNDQS 55
Query: 62 KVIG-------------EKM-----KAKEPVGDSS-----------TLPGNHLHPSVPVS 92
+IG EKM K KE ++ T+P N LH S PV
Sbjct: 56 ALIGKYKREGKNADELLEKMGKVSDKIKELDEKTAKIEEEQNYLLLTIP-NKLHESTPVG 114
Query: 93 NNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+ED+N VR G+ KK+ H +L T + +D E G ++G R KG A
Sbjct: 115 ASEDDNVEVRKWGEP---KKFGFEPKPHEELGTELGILDFERGVKLSGSRFTVYKGMAAK 171
Query: 148 LQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + L E GY + TP +++++M QL +F+++ YK
Sbjct: 172 LERALINFMLDLHTSEHGYEEMLTPQLVKRDIMVGTGQLPKFEDDAYKTT---------- 221
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
DD +LI T+E + +H+D L E+ LP Y G + CFR+E
Sbjct: 222 ------DDMFLIPTAEVTLTNLHKDEILAESELPKYYCGFTACFRREAGSHGKDMKGILR 275
Query: 254 --------------------DLTK------------SIAYRVVNIVSGALNHAAAKKLDL 281
+L K +I YRV+ + SG + A+K DL
Sbjct: 276 QHQFNKVEMVKIVHPENSYDELEKMVNNAETVLQKLNIPYRVLALCSGDIGFGASKTYDL 335
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W P +RE+ SCSN D+Q+RR +++Y + ++K FVH LN + A R + A
Sbjct: 336 EVWIPSQNKYREISSCSNTEDFQARRAMIKY--RSETDKKSYFVHTLNGSGLAVGRTLLA 393
Query: 342 ILETHQTETG-VRIPDCLRKFVPAV 365
I+E +Q E G + IP+ L ++ +
Sbjct: 394 IMENYQKEDGSIEIPEVLIPYMGGI 418
>gi|310778421|ref|YP_003966754.1| seryl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
gi|309747744|gb|ADO82406.1| seryl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
Length = 423
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 164/338 (48%), Gaps = 68/338 (20%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGD-TEVR-KKYSHVDLITMIDGVDSEAGAIVAGG 136
T+P N H S PV +E++N +VRT G+ TE + +H +L + +D E GA + G
Sbjct: 102 TIP-NVYHESTPVGKDEEDNLLVRTWGEPTEFEYEPKNHWELGEELGILDFERGAKLGGA 160
Query: 137 RGYFLKGPAVCLQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV 195
R +G L+ L+ + L E GYT TPF +R+++ + QL +F++++YK
Sbjct: 161 RFTVYRGLGARLERALINFMLDLHTTEHGYTEHITPFLVRRDICEGTGQLPKFEDDMYKT 220
Query: 196 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-- 253
D+ +LI+TSE + +HR L E+ LP Y S CFR+E
Sbjct: 221 T----------------DEMFLISTSEITLTNLHRKEILEESDLPKYYTAHSPCFRREAG 264
Query: 254 -------------------------------DLTKSIA------------YRVVNIVSGA 270
+L K + YR+V + SG
Sbjct: 265 SYGRDVKGLIRQHQFNKVEMVKITTPENSYDELDKMVVNAETVLQKLGLPYRLVQLCSGD 324
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
+ +AAK DLE W PG G +RE+ SCSNC D+Q+RR+ ++Y + +K EFV+ LN
Sbjct: 325 IGFSAAKTYDLEVWLPGQGKYREISSCSNCGDFQARRMGLKY--RPEGTKKSEFVNTLNG 382
Query: 331 TACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
+ A R + AI+E +Q E G + IP+ LR ++ + V
Sbjct: 383 SGVAVGRALLAIMENYQQEDGSIIIPEALRPYMGGIDV 420
>gi|357465105|ref|XP_003602834.1| Seryl-tRNA synthetase [Medicago truncatula]
gi|355491882|gb|AES73085.1| Seryl-tRNA synthetase [Medicago truncatula]
Length = 546
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 167/342 (48%), Gaps = 81/342 (23%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N HP VP+ ED + I +T G + K+S H+ L +D D +A A V+G +
Sbjct: 214 NMTHPDVPI-GGEDSSTIRKTVGSS---PKFSFPVKDHLQLGKELDLFDFDAAAEVSGSK 269
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEELYKVI 196
Y+LK AV L++ L+ + LS+ +++G+TPL TP +R V+++ Q + ++Y +
Sbjct: 270 FYYLKNEAVLLEMALLNWTLSEVMKRGFTPLTTPEIVRSSVVEKCGFQPRAKNTQVYSI- 328
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR----- 251
DS D+ LI T+E P+ +H DS L E+ LP++Y+ S CFR
Sbjct: 329 ------DDS--------DQCLIGTAEIPVGGLHMDSILAESMLPLKYVAFSHCFRTEAGA 374
Query: 252 --------------------------------------QEDLTKSIA--YRVVNIVSGAL 271
+ED+ S+ ++ +++ S L
Sbjct: 375 AGTATRGLYRVHQFSKIEMFIFCRPEESDYYHEELIKIEEDMFSSLGLHFKTLDMASEDL 434
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----------GQTKKMNEK 321
A +K D+EAW PG F E+ S SNC DYQSRRL +RY ++K
Sbjct: 435 GAPAYRKFDVEAWMPGLERFGEISSASNCTDYQSRRLGIRYRPSEVLVPGPKKSKGNLAP 494
Query: 322 IEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+FVH LNATACA R+I +LE +Q E G V IP+ LR F+
Sbjct: 495 PQFVHTLNATACAVPRMIICLLENYQQEDGSVLIPEPLRPFM 536
>gi|297844038|ref|XP_002889900.1| hypothetical protein ARALYDRAFT_471334 [Arabidopsis lyrata subsp.
lyrata]
gi|297335742|gb|EFH66159.1| hypothetical protein ARALYDRAFT_471334 [Arabidopsis lyrata subsp.
lyrata]
Length = 511
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 169/345 (48%), Gaps = 81/345 (23%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N HP VPV ED + I + G +++S H+ L +D +D ++ A V+G +
Sbjct: 178 NMTHPDVPV-GGEDSSAIRKEVGSP---REFSFPIKDHLQLGKDLDLIDFDSAAEVSGSK 233
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE-ELYKVI 196
++LK AV L++ L+ + LS+ +++G+TPL TP +R ++++ + D ++Y +
Sbjct: 234 FFYLKNEAVLLEMALLNWTLSQVMKQGFTPLTTPEIVRSAIVEKCGFQPRGDNTQVYSID 293
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR----- 251
G D+ LI T+E P+ +H DS L E+ LP++Y+ S CFR
Sbjct: 294 GT---------------DQCLIGTAEIPVGGIHMDSILLESVLPLKYIAFSHCFRTEAGA 338
Query: 252 --------------------------------------QEDLTKSIA--YRVVNIVSGAL 271
+EDL S+ ++ +++ + L
Sbjct: 339 AGAATKGLYRVHQFNKAEMFVICRPEDSESFHQELIQIEEDLFTSLGLHFKTLDMATADL 398
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------KMN-EK 321
A +K D+EAW PG G F E+ S SNC DYQSRRL +RY ++ K N
Sbjct: 399 GAPAYRKFDVEAWMPGLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPA 458
Query: 322 IEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
+FVH LNATACA R++ +LE +Q E G V IP+ LR F+ +
Sbjct: 459 TKFVHTLNATACAIPRMMVCLLENYQQEDGAVVIPEPLRPFMGGI 503
>gi|302520443|ref|ZP_07272785.1| LOW QUALITY PROTEIN: seryl-tRNA synthetase [Streptomyces sp. SPB78]
gi|302429338|gb|EFL01154.1| LOW QUALITY PROTEIN: seryl-tRNA synthetase [Streptomyces sp. SPB78]
Length = 348
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 153/332 (46%), Gaps = 71/332 (21%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGG 136
GN +HP VPV ED ++ T G + E H++L ++ +D E A V+G
Sbjct: 22 GNLVHPDVPVGGEED-FALLETHGTIRDFEAEGFAPKDHLELGHLLGAIDVERAAKVSGS 80
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVI 196
R Y+L G L++ LV A+++ G+TP+ TP +R + M L Q +++Y +
Sbjct: 81 RFYYLSGIGALLELALVNAAIAQATAAGFTPMLTPALVRPQAMDGTGFLGQAGQDVYHL- 139
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED-- 254
KD DD YL+ TSE + H D + LP+RY G S CFR+E
Sbjct: 140 ------------KD--DDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCFRREAGS 185
Query: 255 ------------------------------------------LTK-SIAYRVVNIVSGAL 271
LT + +RV+++ +G L
Sbjct: 186 HGKDTRGIFRVHQFDKVEMFTYVAPEDSEAEHRRLLEWEKQWLTSLGLPFRVIDVATGDL 245
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
+AA+K D EAW P G +REL S S+C ++Q+RRL +R KK + LN T
Sbjct: 246 GSSAARKFDCEAWIPTQGKYRELTSTSDCTEFQARRLSIRMRDGKKTRP----LATLNGT 301
Query: 332 ACATTRVICAILETHQTETG-VRIPDCLRKFV 362
CA R I A+LE HQ G VR+P+ LR ++
Sbjct: 302 LCAVPRTIVALLENHQQADGSVRVPEVLRPYL 333
>gi|377564973|ref|ZP_09794281.1| seryl-tRNA synthetase [Gordonia sputi NBRC 100414]
gi|377527861|dbj|GAB39446.1| seryl-tRNA synthetase [Gordonia sputi NBRC 100414]
Length = 425
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 186/434 (42%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFN------- 54
V+DL + R DP+ VR +Q+ R ++ LVD +++ D R +AD+
Sbjct: 4 VIDLKIVRD----DPDLVRASQRVRGEDPGLVDVLLDADSTRRSAIVEADSLRSEQKALG 59
Query: 55 ----------------KFKNLCSKV---IGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K K L +V + + +A E ++ N + + P E
Sbjct: 60 KQVGKASGDEKAALLAKGKELADQVKAAVARQNEADEAASNAQRAISNIVEGAPP--GGE 117
Query: 96 DENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ G E+ H++L + +D E GA V+G R YFL G LQ+GL+
Sbjct: 118 DDYVVLEHVGQPREIENPKDHLELGESLGLIDMERGAKVSGSRFYFLTGQGAMLQLGLLT 177
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A K G+T + P +R EVM L +E+Y + D+ DD
Sbjct: 178 MAAQKATANGFTLMIPPVLVRPEVMGGTGFLGAHADEVYHL--------------DKDDD 223
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H D + + P RY G STCFR+E +
Sbjct: 224 LYLVGTSEVPLAGYHMDEIIDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVE 283
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ G L +AA+K D EAW P
Sbjct: 284 GFVYCKPEDTAAEHQKLLGWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQQ 343
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL +RY + + K + LN T ATTR + AILE HQ
Sbjct: 344 TYRELTSTSNCTTFQARRLSIRY---RDESGKPQVAATLNGT-LATTRWLVAILENHQQA 399
Query: 350 TG-VRIPDCLRKFV 362
G V +PD L +FV
Sbjct: 400 DGSVVLPDELARFV 413
>gi|333917771|ref|YP_004491352.1| seryl-tRNA synthetase [Amycolicicoccus subflavus DQS3-9A1]
gi|333479992|gb|AEF38552.1| Seryl-tRNA synthetase [Amycolicicoccus subflavus DQS3-9A1]
Length = 419
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 186/434 (42%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R DPE VR +Q+ R ++ LVD +++ D + R ADN
Sbjct: 1 MIDLKFLRE----DPEAVRASQRARGEDAGLVDTLLQADTERRSAVASADNLRAEHKALG 56
Query: 62 KVIGEK----------------MKAKEPVGDSSTLP----------GNHLHPSVPVSNNE 95
+ IG+ + K+ D S N +HP VPV
Sbjct: 57 RRIGKASPEDRAELLDGAAKLAQRVKDAEADESAANDRMQQAHRAISNIVHPDVPVGGEA 116
Query: 96 DENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D ++ T G+ + H++L + +D E GA V+G R YFL G LQ+GL+Q
Sbjct: 117 D-FAVLETVGEPRSIENPKDHLELGESLGLLDMERGAKVSGARFYFLTGYGALLQLGLLQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A+ K + G+TP+ P +R E+M L E+Y + DD
Sbjct: 176 LAIQKAVAAGFTPMIPPVLVRPEIMSGTGFLGAHAAEVYHLAD---------------DD 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------------- 253
YL+ TSE PI H L ++ P RY G S+CFR+E
Sbjct: 221 LYLVGTSEVPIAGYHSGEILDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVE 280
Query: 254 ----------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
D+ +I YR++++ SG L +A +K D EAW P
Sbjct: 281 MFSYCRPDEATAEHNRLLGWEKDMLSAIEVPYRIIDVASGDLGSSAVRKFDCEAWIPTQQ 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL +RY + N K + LN T ATTR I A+LE HQ
Sbjct: 341 TYRELTSTSNCTTFQARRLGIRY---RDENGKPQMAATLNGT-LATTRWIVALLENHQQA 396
Query: 350 TG-VRIPDCLRKFV 362
G VR+P L FV
Sbjct: 397 DGSVRVPAALVPFV 410
>gi|219685837|ref|ZP_03540645.1| serine--tRNA ligase [Borrelia garinii Far04]
gi|219672611|gb|EED29642.1| serine--tRNA ligase [Borrelia garinii Far04]
Length = 425
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 166/340 (48%), Gaps = 77/340 (22%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N L P VP+ N+E++N ++ G V K+ H++L +D +D + V+G +
Sbjct: 104 NILSPDVPIGNSEEDNFEIKKVG---VVPKFDFKPKDHLELGRDLDLLDFDRAREVSGSK 160
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEE-LYKVI 196
Y+LK AV L++ L+ ++L+K EKG+ TP R+ ++ + + DE +YK+
Sbjct: 161 FYYLKNEAVFLEIALINFSLNKLREKGFDVFITPDIAREFIVDGIGFNPRGDESNIYKI- 219
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--- 253
E DKYL+ TSE + + + + + +LPI+ G S CFR+E
Sbjct: 220 --------------ESTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAGA 264
Query: 254 --DLTKS----------------------------------------IAYRVVNIVSGAL 271
L+K I YRV+NI S L
Sbjct: 265 YGQLSKGLYRVHQFSKVEMFCFCKAEESQVIHDEFLSIQEQIFTELEIPYRVLNICSFDL 324
Query: 272 NHAAAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
A KK D+EAW PG G++ E+ S SNC DYQSRRL +RY K +E+ +F HM+
Sbjct: 325 GSPAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRY---KDQDEQNKFAHMV 381
Query: 329 NATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
N TA ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 382 NGTAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|375098490|ref|ZP_09744753.1| seryl-tRNA synthetase [Saccharomonospora cyanea NA-134]
gi|374659222|gb|EHR59100.1| seryl-tRNA synthetase [Saccharomonospora cyanea NA-134]
Length = 421
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 193/442 (43%), Gaps = 98/442 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R E P+ VR +Q+ R ++V +VD+++ D + R +ADN +
Sbjct: 1 MIDLRTLREE----PDVVRASQRARGEDVGVVDRLLSLDAERRSAIARADNLRAEQKQLG 56
Query: 62 KVIG--------------------------EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K IG E+ +A E + N +HP VP +
Sbjct: 57 KRIGKASGEERESLLAHGKELAAQVKAAEAEQNRASEEFEQLHRVVPNVVHPDVPAGGED 116
Query: 96 DENGI--VRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
D + V T + + K H++L + +D E GA V+G R YFL G LQ+ L+
Sbjct: 117 DFVVLKHVGTPREFDFTPK-DHLELGEALGAIDMERGAKVSGARFYFLTGIGARLQLALL 175
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
A ++ EKG+ + P +R E+M L E+Y + P+ D
Sbjct: 176 NLAAAQAAEKGFQLMIPPVLVRPEIMAGTGFLGAHSSEVYHL-----------PD----D 220
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------- 254
D YL+ TSE P+ H D L + P RY G S+CFR+E
Sbjct: 221 DLYLVGTSEVPLAGYHSDEILDLTAGPQRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKV 280
Query: 255 -------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 288
L K + YRV++ +G L +AA+K D EAW P
Sbjct: 281 EMFVFCEPSDAEAEHERLLAWEEEMLAKIEVPYRVIDTAAGDLGSSAARKYDCEAWVPTQ 340
Query: 289 GAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQT 348
A+REL S SNC YQ+RRL VRY + + + + LN T ATTR I AILE HQ
Sbjct: 341 QAYRELTSTSNCTTYQARRLSVRY---RDSDGRPQVAATLNGT-LATTRWIVAILENHQQ 396
Query: 349 ETG-VRIPDCLRKFVPAVYVNE 369
G VR+P+ LR F+ + V E
Sbjct: 397 ADGSVRVPEALRPFLGGLSVLE 418
>gi|423613644|ref|ZP_17589504.1| seryl-tRNA synthetase [Bacillus cereus VD107]
gi|401241402|gb|EJR47791.1| seryl-tRNA synthetase [Bacillus cereus VD107]
Length = 424
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT GD K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGDV---KEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILSKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|269124398|ref|YP_003297768.1| seryl-tRNA synthetase [Thermomonospora curvata DSM 43183]
gi|268309356|gb|ACY95730.1| seryl-tRNA synthetase [Thermomonospora curvata DSM 43183]
Length = 418
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 196/437 (44%), Gaps = 104/437 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR----QFRHKADNFNKFK 57
++DL R DPE++R +Q+ R ++ +VD++I+ D + R QF F
Sbjct: 1 MIDLRALRE----DPERLRASQRARGEDEAVVDRLIDLDERRRAALSQFEKLRAEQKSFG 56
Query: 58 NLCSKVIGEKMKA------------KEPVGDSSTLPG--NHLHPSVP-------VSNNED 96
SK GE+ +A KE ++ L N + VP E
Sbjct: 57 KSVSKAKGEERQALLERAKELARQVKEAEAEADRLQEELNEVLRGVPNIIEEGAPPGGEQ 116
Query: 97 ENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
+ ++ G D E R H++L ++ +D+E GA V+G R Y+L G LQ+
Sbjct: 117 DFVVLEHVGEPPTFDFEPR---DHLELGELLGAIDTERGAKVSGARFYYLTGVGARLQLA 173
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDE 211
L+ A+ + IE G+ P+Y P ++ E M+ L E+Y++ E
Sbjct: 174 LLNLAMEQAIEAGFFPMYPPVLVKPEAMEGTGFLGAHASEVYRL---------------E 218
Query: 212 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED----------------- 254
DD YL+ TSE P+ A H + + + LP RY+ S+CFR+E
Sbjct: 219 ADDLYLVGTSEVPLAAYHMNEIIDD--LPRRYVAWSSCFRREAGSYGKDTRGIIRVHQFD 276
Query: 255 ---------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFP 286
L K + YRV+++ +G L +AA+K D EAW P
Sbjct: 277 KVEMFSYCTLEDSHAEHLRLLEWEKQMLAKVELPYRVIDVAAGDLGASAARKYDCEAWLP 336
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
+RE+ S SNC D+Q+RRL VR+ + + K V LN T ATTR I AILE H
Sbjct: 337 SQNTYREVTSTSNCTDFQARRLAVRH---RGEDGKPRPVATLNGT-LATTRWIVAILENH 392
Query: 347 QTETG-VRIPDCLRKFV 362
Q G VR+P L++ +
Sbjct: 393 QQADGSVRVPKALQRHL 409
>gi|407279378|ref|ZP_11107848.1| seryl-tRNA ligase [Rhodococcus sp. P14]
Length = 420
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 181/435 (41%), Gaps = 98/435 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R +P+ VR +Q+ R ++ LVD ++E D R DN +
Sbjct: 1 MIDLKFLRE----NPDVVRASQRTRGEDPGLVDALLEADAARRAAVLAGDNIRAEQKALG 56
Query: 62 KVIGEKMKAKEP--------------------------VGDSSTLPGNHLHPSVPVSNNE 95
K +G+ + P +G + N + P + E
Sbjct: 57 KKVGQASPEERPALLEGAKELAANVKKLEAEQHAAEEALGRAHMAISNIVQEGAP-AGGE 115
Query: 96 DENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
D+ + T G+ T + H+ L + +D E GA V+G R YFL G LQ+G++
Sbjct: 116 DDFVTLETVGELPTFDFEPKDHLALGESLGLIDMERGAKVSGARFYFLTGYGALLQLGML 175
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
Q A + + G+ + P +R E+MQ L +E+Y + D
Sbjct: 176 QLAAQRAVANGFQMMIPPVLVRPEIMQGTGFLGAHADEIYHLAD---------------D 220
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------------- 253
D YL+ TSE P+ H L + P RY G S+CFR+E
Sbjct: 221 DLYLVGTSEVPLAGYHSGEILDLSGGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKV 280
Query: 254 -----------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGS 288
D+ +I YRV+++ G L +AA+K D EAW P
Sbjct: 281 EMFVYCKPEDAVAEHQRLLAWERDMLAAIEVPYRVIDVAGGDLGSSAARKFDCEAWVPTQ 340
Query: 289 GAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQT 348
+REL S SNC +Q+RRL VRY + N K + LN T ATTR + AILE HQ
Sbjct: 341 ERYRELTSTSNCTTFQARRLGVRY---RDENGKPQIAATLNGT-LATTRWLVAILENHQQ 396
Query: 349 ETG-VRIPDCLRKFV 362
G VR+P L FV
Sbjct: 397 ADGSVRVPSALVPFV 411
>gi|357465107|ref|XP_003602835.1| Seryl-tRNA synthetase [Medicago truncatula]
gi|355491883|gb|AES73086.1| Seryl-tRNA synthetase [Medicago truncatula]
Length = 379
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 167/342 (48%), Gaps = 81/342 (23%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N HP VP+ ED + I +T G + K+S H+ L +D D +A A V+G +
Sbjct: 47 NMTHPDVPI-GGEDSSTIRKTVGSS---PKFSFPVKDHLQLGKELDLFDFDAAAEVSGSK 102
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEELYKVI 196
Y+LK AV L++ L+ + LS+ +++G+TPL TP +R V+++ Q + ++Y +
Sbjct: 103 FYYLKNEAVLLEMALLNWTLSEVMKRGFTPLTTPEIVRSSVVEKCGFQPRAKNTQVYSI- 161
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR----- 251
DS D+ LI T+E P+ +H DS L E+ LP++Y+ S CFR
Sbjct: 162 ------DDS--------DQCLIGTAEIPVGGLHMDSILAESMLPLKYVAFSHCFRTEAGA 207
Query: 252 --------------------------------------QEDLTKSIA--YRVVNIVSGAL 271
+ED+ S+ ++ +++ S L
Sbjct: 208 AGTATRGLYRVHQFSKIEMFIFCRPEESDYYHEELIKIEEDMFSSLGLHFKTLDMASEDL 267
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----------GQTKKMNEK 321
A +K D+EAW PG F E+ S SNC DYQSRRL +RY ++K
Sbjct: 268 GAPAYRKFDVEAWMPGLERFGEISSASNCTDYQSRRLGIRYRPSEVLVPGPKKSKGNLAP 327
Query: 322 IEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+FVH LNATACA R+I +LE +Q E G V IP+ LR F+
Sbjct: 328 PQFVHTLNATACAVPRMIICLLENYQQEDGSVLIPEPLRPFM 369
>gi|453379352|dbj|GAC85842.1| serine--tRNA ligase [Gordonia paraffinivorans NBRC 108238]
Length = 419
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 186/434 (42%), Gaps = 96/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + R DP+ VR +Q+ R ++ LVD ++E D + R +AD +
Sbjct: 1 MIDLKIVRD----DPDLVRASQRARGEDPGLVDALLEADAERRSAIVEADTLRSEQKALG 56
Query: 62 KVIG------------------EKMKAKEPVGDSSTLP--------GNHLHPSVPVSNNE 95
K +G EK+KA + N + P P + E
Sbjct: 57 KQVGKAQGEEKQALLAKGKELAEKVKAAVARQAEAEAATARAHRAISNIVAPQAP-AGGE 115
Query: 96 DENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ G+ E+ H++L + +D E GA V+G R YFL G LQ+GL+
Sbjct: 116 DDYVVLEHVGEVREIENPKDHLELGESLGLLDMERGAKVSGSRFYFLTGQGAFLQLGLLN 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A K G+ + P +R EVM+ L +E+Y + D+ DD
Sbjct: 176 MAAQKAAANGFQLMIPPVLVRPEVMEGTGFLGAHADEVYHL--------------DKDDD 221
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H D L + P RY G STCFR+E +
Sbjct: 222 LYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVE 281
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ G L +AA+K D EAW P
Sbjct: 282 GFVYCKPEDAEAEHQRLLNWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWIPTQN 341
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL +RY + N K + LN T ATTR + AILE HQ
Sbjct: 342 TYRELTSTSNCTTFQARRLSIRY---RDSNGKPQVAATLNGT-LATTRWLVAILENHQQP 397
Query: 350 TG-VRIPDCLRKFV 362
G V++P L KFV
Sbjct: 398 DGSVKLPPELAKFV 411
>gi|19713538|gb|AAL94319.1| Seryl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 424
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 199/457 (43%), Gaps = 116/457 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
++L+L R + E +++ K+R NV++ D +E D K R+ + +N + +N
Sbjct: 3 IMLELKFMRE----NVEMLKEMLKNRNSNVDM-DAFVELDSKRREVLSEVENLKRERNNA 57
Query: 61 SKVIGEKMKAK-------EPVGDSST----------------------LPGNHLHPSVPV 91
S I K K E +G+ ST +P N HPS P+
Sbjct: 58 SAEIANLKKEKKNADHIIEKMGEVSTKIKDLDAELVEIDEKIKDIQLNIP-NVYHPSTPI 116
Query: 92 SNNEDENGIVRTKGDTEVRKKY-----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
+ED N +R G + KK+ SH D+ + +D E GA ++G R +G A
Sbjct: 117 GPDEDYNLEIRKWG---IPKKFDFEPKSHWDIGEDLGILDFERGAKLSGSRFVLYRGAAA 173
Query: 147 CLQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
L+ ++ + L +E+GYT TPF ++ EV + QL +F+E++YK
Sbjct: 174 RLERAIINFMLDVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTT--------- 224
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
DD YLI+TSE + +HR L +A LP Y S CFR+E
Sbjct: 225 -------DDMYLISTSEITMTNIHRKEILEQAELPKYYTAYSPCFRREAGSYGKDVKGLI 277
Query: 254 ---------------------DLTK------------SIAYRVVNIVSGALNHAAAKKLD 280
+L K + YRV+ + SG L +AAK D
Sbjct: 278 RLHQFNKVEMVKITDAESSYDELEKMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYD 337
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
LE W P +RE+ SCSNC +Q+RR+ ++Y ++ EF H LN + A R +
Sbjct: 338 LEVWLPSQNKYREISSCSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLV 393
Query: 341 AILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
AI+E +Q E G + VP V + G + +K
Sbjct: 394 AIMENYQQEDGSFL-------VPKVLIPYMGGVDVIK 423
>gi|348175400|ref|ZP_08882294.1| seryl-tRNA synthetase [Saccharopolyspora spinosa NRRL 18395]
Length = 420
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 188/438 (42%), Gaps = 104/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R DPE VR +Q+ R ++ LVD ++ D + R +ADN +
Sbjct: 1 MIDLKTLRD----DPEAVRASQRARGEDASLVDALLSADERRRSAVSQADNLRAEQKQLG 56
Query: 62 KVIG--------------------------EKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K +G E+ A E + S N + P VP E
Sbjct: 57 KQVGKAKGEDREDLLTRAKELAAQVKEAEAEQSAADEELLRSQKAVSNVVEPDVP-PGGE 115
Query: 96 DENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ ++ G D E++ HV+L T I D E GA VAG R YFL G L++
Sbjct: 116 DDYAVLEHVGVPREFDFEIK---DHVELGTAIGAFDMERGAKVAGARFYFLTGIGAQLEL 172
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A ++ G+T + P +R E+M+ L E+Y++
Sbjct: 173 ALLNMAAAQAAAAGFTLVVPPVLVRPEIMEGTGFLGAHATEVYRL--------------- 217
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
E DD YL+ TSE P+ H + ++ P+RY G STCFR+E
Sbjct: 218 EEDDLYLVGTSEVPLAGYHAGEIVDLSAGPLRYAGWSTCFRREAGSYGRDTRGIIRVHQF 277
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
L K + YRV++ +G L +AA+K D EAW
Sbjct: 278 NKLEMFVYCRADEARDEHQRLLAWEEEMLAKIEVPYRVIDTAAGDLGASAARKFDCEAWV 337
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +REL S SNC +Q+RRL RY + + + + LN T ATTR I AILE
Sbjct: 338 PSQQTYRELTSTSNCTTFQARRLNTRY---RDEDGRPQIAATLNGT-LATTRWIVAILEN 393
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G V++P+ LR F+
Sbjct: 394 HQQPDGSVQVPEALRPFL 411
>gi|334139393|ref|ZP_08512785.1| serine--tRNA ligase [Paenibacillus sp. HGF7]
gi|333602206|gb|EGL13637.1| serine--tRNA ligase [Paenibacillus sp. HGF7]
Length = 427
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 194/444 (43%), Gaps = 99/444 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRF-KNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
+ D+ L RT D E V+ K+R K +E V ++ E D+K R+ + + +N
Sbjct: 1 MFDIKLIRT----DIETVQTAMKNRGGKQLEEVTRIAELDVKRRELLQEVEQLKNRRNTV 56
Query: 61 SKVIGEKMKAKEP----------VGD----------SSTLPGNHL--------HPSVPVS 92
S+ + + KAKE VGD + + NHL H SVPV
Sbjct: 57 SQEVAMRKKAKEDADDLIAEMKGVGDRIKELDEELRTLEVELNHLLLSIPNVPHESVPVG 116
Query: 93 NNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
E++N +R G+ + +H DL T + +D EA V G R F KG L+
Sbjct: 117 ATEEDNIEIRRNGNVPEFGFEAKAHWDLATDLGILDFEAAGKVTGSRFVFYKGLGARLER 176
Query: 151 GLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + + E GY + P+ + ++ + QL +F+E+++ +
Sbjct: 177 ALMNFMMDLHSTEHGYEEMLPPYIVNRDSLTGTGQLPKFEEDVFHI-------------- 222
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
E + +LI T+E P+ HRD L LP +++ S CFR E
Sbjct: 223 -ENSEYFLIPTAEVPVTNYHRDDILAAEQLPRKFVAFSACFRSEAGAAGRDTRGLIRQHQ 281
Query: 254 ----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+L K + YRV+ + +G + +AK DLE W
Sbjct: 282 FNKVELVKLVKPEESYEELEELTHNAERVLQLLKLPYRVLTLCTGDIGFTSAKTYDLEVW 341
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P S A+RE+ SCSN D+Q+RR +R+ + K K EFVH LN + A R + AILE
Sbjct: 342 LPSSEAYREISSCSNFEDFQARRANIRFRRDAKA--KPEFVHTLNGSGLAIGRTVAAILE 399
Query: 345 THQTETG-VRIPDCLRKFVPAVYV 367
+Q E G V +P+ L ++ V V
Sbjct: 400 NYQQEDGSVTVPEVLVPYMNGVTV 423
>gi|300087729|ref|YP_003758251.1| seryl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527462|gb|ADJ25930.1| seryl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 413
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 188/429 (43%), Gaps = 91/429 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL LFR +PE ++K DR ++++I D + + D + K S
Sbjct: 1 MLDLKLFRE----NPEVIKKAMNDRQAKAP-IEEIITADDERKVISQSLDELRRQKKTLS 55
Query: 62 K----------VIGEKMKAKEP--------VGDSSTLPGNHLHPSVPVSNNEDENGIVRT 103
K ++ EK+ E + D N PSVP E +N + R
Sbjct: 56 KSGPIVPEKGRIVREKISELEERLRDIEGCLKDLLLQVPNIPQPSVPYGTGEADNVVRRY 115
Query: 104 KGDT---EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW 160
G+ E K SH +L +D +D E G ++G R Y LK LQ L+ L
Sbjct: 116 YGEKREFEFTPK-SHWELGEQLDIIDFERGVKISGSRFYVLKNAGARLQRSLISLFLDIH 174
Query: 161 I-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIA 219
+ GY+ +Y PF +++E + L +F + LY+ D DD +++
Sbjct: 175 TRQHGYSEMYLPFMVKQESLFGSGNLPKFADNLYR---------------DANDDLWMVP 219
Query: 220 TSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS--------------------- 258
T+E P+ +HRD L + LP Y + CFR+E ++
Sbjct: 220 TAEVPLTNLHRDEILASSELPKHYCAYTACFRREKMSAGKDTRGIKRGHQFDKVELYKFT 279
Query: 259 ------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFREL 294
+ YR+V + +G + A++K D+E W PG G + E+
Sbjct: 280 TPESSNQELEKLLNDAEAIAKALELPYRIVELCTGDIGFASSKSYDIEIWAPGVGEWLEV 339
Query: 295 VSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VR 353
SCSNCLD+Q+RR +RY ++ N K+E+VH LN + A RV+ A+LE +Q G +
Sbjct: 340 SSCSNCLDFQARRANIRY--RREDNNKVEYVHTLNGSGLALPRVVIAVLENYQESDGSIT 397
Query: 354 IPDCLRKFV 362
IP L+ ++
Sbjct: 398 IPAALKPYM 406
>gi|421874122|ref|ZP_16305729.1| seryl-tRNA synthetase [Brevibacillus laterosporus GI-9]
gi|372456777|emb|CCF15278.1| seryl-tRNA synthetase [Brevibacillus laterosporus GI-9]
Length = 427
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 191/439 (43%), Gaps = 100/439 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ + R D E+VR+ R +++ +D+ E D K RQ + D +N S
Sbjct: 1 MLDVKILRQ----DLEEVRRRLAHRNEDISALDQFAEVDEKRRQLIQEGDTLKNKRNTVS 56
Query: 62 --------------------KVIGEKMKA-KEPVGDSS--------TLPGNHLHPSVPVS 92
K + E++KA E + + +LP N H S P+
Sbjct: 57 EQVAVLKRNKENADHLISEMKQVNERIKALDEELRELDEQLTVILLSLP-NLPHESTPIG 115
Query: 93 NNEDENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
ED+N + R G+ T + H ++ + +D E + V G R F KG L+
Sbjct: 116 TTEDDNVVHRVWGEASTFSFEPKPHWEVADALGILDFETASKVTGSRFVFYKGMGARLER 175
Query: 151 GLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + + +K GY + P+ + + M QL +F+E+ +K+ G
Sbjct: 176 ALINFMMDLHADKHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFKIDGV----------- 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D +LI TSE P+ +HRD L A LPI+Y S CFR E
Sbjct: 225 ----DYFLIPTSEVPVTNMHRDEILDVAQLPIKYNAFSACFRSEAGSAGRDTRGLIRQHQ 280
Query: 254 ----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+L K + YRV+++ +G L AAKK DLE W
Sbjct: 281 FNKVELVKFVKPEDSYEELEKLVNNAETVLQMLGLPYRVMSMCTGDLGFTAAKKYDLEVW 340
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P +RE+ SCSN D+Q+RR +R+ + K K EFVH +N + A R + AILE
Sbjct: 341 LPSYSTYREISSCSNFEDFQARRANIRFRRDAK--SKPEFVHTMNGSGLALGRTVAAILE 398
Query: 345 THQTETG-VRIPDCLRKFV 362
+Q E G V IP+ LR ++
Sbjct: 399 NYQQEDGSVIIPEALRPYM 417
>gi|418324509|ref|ZP_12935746.1| serine--tRNA ligase [Staphylococcus pettenkoferi VCU012]
gi|365225926|gb|EHM67162.1| serine--tRNA ligase [Staphylococcus pettenkoferi VCU012]
Length = 427
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 192/441 (43%), Gaps = 104/441 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ LFRTE P+ V+ R + +VDKV+E D K R + K + +N S
Sbjct: 1 MLDIRLFRTE----PDMVKDKIAKRGMDSSVVDKVLELDEKRRDYISKTEEMKAERNRVS 56
Query: 62 KVIGEKMKAKEPVGD--------------------------SSTLPG--NHLHPSVPVSN 93
I EK + KE D TL G N +H VP
Sbjct: 57 GEIAEKKRNKEDADDVIKEMRELGDKIKEIDASLNDVDQELHDTLAGIPNLIHDDVPEGE 116
Query: 94 NEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
++++N ++ G D E + H DL+ + D + A V+G R FL G L
Sbjct: 117 SDEDNVELKRWGTPREFDFEAK---PHWDLVEELKMADFDRAAKVSGARFVFLTGDGALL 173
Query: 149 QVGLVQYALSKW-IEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
+ L+ Y ++K ++GYT + P + + M QL +F+E+L+KV
Sbjct: 174 ERALMNYMITKHTTQQGYTEMMAPQLVNADSMYGTGQLPKFEEDLFKV------------ 221
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ--------------- 252
EK+ L Y I T+E P +R+ L + LP + G + CFR
Sbjct: 222 EKEGL---YTIPTAEVPFTNFYRNEILDKDQLPALFTGQTACFRSEAGSAGRDTRGLIRL 278
Query: 253 ---------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLE 282
E+LT++ + YR VN+ +G + A+K DLE
Sbjct: 279 HQFDKVEMVRYEKPEDSWDALEELTQNAESILEELELPYRRVNLCTGDIGFGASKTYDLE 338
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
W P ++E+ SCSN D+Q+RR +R+ + K + K EFVH LN + A R AI
Sbjct: 339 VWLPSYNEYKEISSCSNVTDFQARRANIRFKRDK--DAKPEFVHTLNGSGLAVGRTFAAI 396
Query: 343 LETHQTETG-VRIPDCLRKFV 362
+E +Q E G + IP+ L ++
Sbjct: 397 VENYQNEDGSITIPEALVPYM 417
>gi|284028198|ref|YP_003378129.1| seryl-tRNA synthetase [Kribbella flavida DSM 17836]
gi|283807491|gb|ADB29330.1| seryl-tRNA synthetase [Kribbella flavida DSM 17836]
Length = 424
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 145/294 (49%), Gaps = 66/294 (22%)
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFM 174
H++L ++ +D E GA V+G R YFLKG LQ+G++Q A+++ +E G+TP+ TP +
Sbjct: 140 HLELGELLGAIDMERGAKVSGARFYFLKGVGAQLQLGMLQLAINQAVEYGFTPMITPTLV 199
Query: 175 RKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL 234
+ EVM L D ++Y++ ++ EL YL+ TSE + H D L
Sbjct: 200 KPEVMDGTGYLNAHD-DVYRL------------QEPEL---YLVGTSEVSLAGYHMDEIL 243
Query: 235 PEASLPIRYLGVSTCFRQEDLTKS------------------------------------ 258
+ P+RY G S+C+R+E +
Sbjct: 244 DLSGGPVRYAGWSSCYRREAGSYGKDTRGIIRVHQFDKVEMFSYCSLEDAEAEHQRLLGW 303
Query: 259 ---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
+AYRV++ +G L +A +K D EAW P GA+REL S SN DYQ+RRL
Sbjct: 304 EKEMLDKMELAYRVIDTATGDLGASAYRKFDCEAWVPTQGAYRELTSTSNTTDYQARRLN 363
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+R+ + + V LN T ATTR I AILETHQ G VR+P LR +V
Sbjct: 364 IRH---RDAEGRTRHVATLNGT-LATTRWIVAILETHQLPDGSVRVPAALRPYV 413
>gi|161485661|ref|NP_603020.2| seryl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|30173182|sp|Q8RH11.2|SYS_FUSNN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
Length = 421
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 192/441 (43%), Gaps = 112/441 (25%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAK----- 71
E +++ K+R NV++ D +E D K R+ + +N + +N S I K K
Sbjct: 12 EMLKEMLKNRNSNVDM-DAFVELDSKRREVLSEVENLKRERNNASAEIANLKKEKKNADH 70
Query: 72 --EPVGDSST----------------------LPGNHLHPSVPVSNNEDENGIVRTKGDT 107
E +G+ ST +P N HPS P+ +ED N +R G
Sbjct: 71 IIEKMGEVSTKIKDLDAELVEIDEKIKDIQLNIP-NVYHPSTPIGPDEDYNLEIRKWG-- 127
Query: 108 EVRKKY-----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS-KWI 161
+ KK+ SH D+ + +D E GA ++G R +G A L+ ++ + L +
Sbjct: 128 -IPKKFDFEPKSHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERAIINFMLDVHTL 186
Query: 162 EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
E+GYT TPF ++ EV + QL +F+E++YK DD YLI+TS
Sbjct: 187 EEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTT----------------DDMYLISTS 230
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------------- 253
E + +HR L +A LP Y S CFR+E
Sbjct: 231 EITMTNIHRKEILEQAELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDA 290
Query: 254 -----DLTK------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVS 296
+L K + YRV+ + SG L +AAK DLE W P +RE+ S
Sbjct: 291 ESSYDELEKMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISS 350
Query: 297 CSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPD 356
CSNC +Q+RR+ ++Y ++ EF H LN + A R + AI+E +Q E G +
Sbjct: 351 CSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFL-- 404
Query: 357 CLRKFVPAVYVNEAGEIPFVK 377
VP V + G + +K
Sbjct: 405 -----VPKVLIPYMGGVDVIK 420
>gi|404212807|ref|YP_006666982.1| Seryl-tRNA synthetase [Gordonia sp. KTR9]
gi|403643606|gb|AFR46846.1| Seryl-tRNA synthetase [Gordonia sp. KTR9]
Length = 419
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 181/420 (43%), Gaps = 90/420 (21%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG--------- 65
+P+ VR +Q+ R ++ LVD ++ D + R +AD + K +G
Sbjct: 10 NPDLVRTSQRSRGEDPGLVDALLAADAERRAAIVEADALRSEQKSLGKQVGKAQGEEKQA 69
Query: 66 ---------EKMKAKEPVGDSSTLPGNHLHPSV-------PVSNNEDENGIVRTKGDT-E 108
E++KA + H ++ + ED+ ++ G+ +
Sbjct: 70 LLAKGKQLAEQVKAAVSRQSEADAAATKAHRAISNIVAEGAPAGGEDDYVVLEHVGEPRD 129
Query: 109 VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPL 168
+ H+++ + +D E GA V+G R YFL G LQ+ L+ A K G+T +
Sbjct: 130 IENPKDHLEIGESLGLLDMERGAKVSGSRFYFLTGQGAHLQLALLNMAAQKATANGFTLM 189
Query: 169 YTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAV 228
P +R EVM+ L +E+Y + D+ DD YL+ TSE P+
Sbjct: 190 IPPVLVRPEVMEGTGFLGAHADEVYHL--------------DKDDDLYLVGTSEVPLAGY 235
Query: 229 HRDSWLPEASLPIRYLGVSTCFRQE----------------------------------- 253
H D L + P RY G STCFR+E
Sbjct: 236 HMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEDAAAEH 295
Query: 254 --------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDY 303
D+ +I YRV+++ G L +A++K D EAW P G +REL S SNC +
Sbjct: 296 QRLLGWEKDMLAAIDVPYRVIDVAGGDLGSSASRKYDCEAWIPTQGTYRELTSTSNCTTF 355
Query: 304 QSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
Q+RRL +RY + N K + LN T ATTR + AILE HQ G VR+P L KFV
Sbjct: 356 QARRLSIRY---RDENGKPQTAATLNGT-LATTRWLVAILENHQQPDGSVRLPAELAKFV 411
>gi|423471665|ref|ZP_17448409.1| seryl-tRNA synthetase [Bacillus cereus BAG6O-2]
gi|402431156|gb|EJV63227.1| seryl-tRNA synthetase [Bacillus cereus BAG6O-2]
Length = 424
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 151/326 (46%), Gaps = 66/326 (20%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
H S PV ED+N + RT G+ + + H DL T + +D E V G R F KG
Sbjct: 109 HESAPVGETEDDNVVARTWGEVKEFTYESKPHWDLATDLGILDFERAGKVTGSRFVFYKG 168
Query: 144 PAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 169 AGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI------- 221
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 --------ESEDYFLIPTAEVPVTNMHRDEILSKEQLPIRYAAFSSCFRSEAGSAGRDTR 273
Query: 254 -----------DLTK-------------------------SIAYRVVNIVSGALNHAAAK 277
+L K ++YRV+++ +G L AAK
Sbjct: 274 GLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELSYRVMSMCTGDLGFTAAK 333
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A R
Sbjct: 334 KYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLAIGR 391
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
+ AILE +Q E G + IP+ LR ++
Sbjct: 392 TVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|325967919|ref|YP_004244111.1| seryl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
gi|323707122|gb|ADY00609.1| seryl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
Length = 468
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 196/447 (43%), Gaps = 119/447 (26%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI---------GE 66
P+ VR + + R +V +VD+ IE D KWR + + D N+ ++ + G+
Sbjct: 13 PDTVRDSLRKRRMDVGIVDRFIELDNKWRSLKAEIDELRHKHNVITREVSKLKGTEREGK 72
Query: 67 KMKAKEPVGDSS------------------TLPGNHLHPSVPVS---------------- 92
+AKE + + ++P N +H SVP
Sbjct: 73 IKEAKELLNEIQKKEEELENIEREREKVLRSIP-NLVHESVPYDCPGGIDSIPARFYGTP 131
Query: 93 ----------NNEDENGIVRTKGDTEVRKKYSHVDLITMIDGV-DSEAGAIVAGGRGYFL 141
++ E +T K H D++ ++ G+ D+ VAG R Y+L
Sbjct: 132 KVWIGHAKEFKDQTERFGFNVPYETIDWKPIGHADMLEVVLGMGDTLKAGEVAGSRFYYL 191
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
V L + L+ YA+ +KG+ + P+ ++ EV+ E+ + F + +YKV
Sbjct: 192 FDDLVMLDMALLTYAIDYMTKKGFKLVLPPYMLKYEVLSEILDMDTFKDMVYKV------ 245
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------- 253
E +D YLI T+E PI A R + L E LP+ ++GVS FR+E
Sbjct: 246 ---------ENEDLYLIGTAEHPIAAYLRHTELLEDQLPLLFVGVSPSFRREASAGNRDM 296
Query: 254 ----------------------------DLTKS---------IAYRVVNIVSGALNHAAA 276
+L ++ + YRVV + + + AA
Sbjct: 297 KGIFRVHQFHKVEQFVFSLPEDSWRWHEELIRNAEELWQGLGLPYRVVLLCAHDMGRCAA 356
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
K+ DLE W P G +RE+VSCSNC D+QS +L +R + + + EFVH LN+TA A+T
Sbjct: 357 KQYDLEVWMPAQGMYREMVSCSNCTDWQSAKLGIR---VLRKDMRREFVHTLNSTAIAST 413
Query: 337 RVICAILETHQTETG-VRIPDCLRKFV 362
R I AILE +Q G V IP LR+++
Sbjct: 414 RTITAILENYQEPDGTVVIPKALRRYL 440
>gi|392418768|ref|YP_006455373.1| seryl-tRNA synthetase [Mycobacterium chubuense NBB4]
gi|390618544|gb|AFM19694.1| seryl-tRNA synthetase [Mycobacterium chubuense NBB4]
Length = 419
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 190/443 (42%), Gaps = 97/443 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + R +P+ VR +Q+ R ++ LVD + + D R ADN + S
Sbjct: 1 MIDLKVLRE----NPDAVRASQQARGEDPGLVDALAQADAARRAAISNADNLRAEQKAAS 56
Query: 62 KVIGEKMKAKEPVGDSST--------------------------LPGNHLHPSVPVSNNE 95
K +G+ + P +S N + VP + E
Sbjct: 57 KRVGKASPDERPALLASAKELAERVKAAEAAQDEAEKAYTTAHMAISNVIIDGVP-AGGE 115
Query: 96 DENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ T G+ + H++L + +D GA V+G R YFL G LQ+GL Q
Sbjct: 116 DDFVVLDTVGEPPAIDDPKDHLELGESLGLIDMARGAKVSGSRFYFLTGYGALLQLGLFQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A+ E G+T + P +R E+M L +E+Y+V E DD
Sbjct: 176 LAVRTATENGFTLMVPPVLVRPEIMAGTGFLGAHADEVYRV---------------EADD 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H D + ++ P+RY G S+CFR+E +
Sbjct: 221 LYLVGTSEVPLAGFHADEIVDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV++I +G L +AA+K D EAW P
Sbjct: 281 GFVYCRPEEAEAEHERLLGWQRQMLAHIEVPYRVIDIAAGDLGSSAARKFDCEAWVPTQN 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL VRY + N K + LN T ATTR + AILE HQ
Sbjct: 341 TYRELTSTSNCTTFQARRLAVRY---RDENGKPQTAATLNGT-LATTRWLVAILENHQQP 396
Query: 350 TG-VRIPDCLRKFVPAVYVNEAG 371
G VRIP+ L +V A + G
Sbjct: 397 DGSVRIPEALVPYVGAEVLTPKG 419
>gi|300742531|ref|ZP_07072552.1| serine--tRNA ligase [Rothia dentocariosa M567]
gi|300381716|gb|EFJ78278.1| serine--tRNA ligase [Rothia dentocariosa M567]
Length = 434
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 197/459 (42%), Gaps = 110/459 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D++L R +PE R +Q+ R K+ VD+++E D R +N +N
Sbjct: 1 MIDINLLRE----NPEIFRASQRARGKDEAHVDRILEADAARRASIGTYENLRAEQNAFG 56
Query: 62 KVIGEKMKAKEP--VGDSSTLPG------------------------NHLHPSVPVSNNE 95
K + + K ++P V + L N + VP + E
Sbjct: 57 KQVAKAPKEEKPALVAQAKELAAHVANAKAASEAKTAEYEELLSSIENLIIDGVP-TGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +++ G E + H+++ +I G+D GA V+G R YFLKG L+
Sbjct: 116 DDFVVLKEVGTPRDFAAEGFEPRDHLEIGELIGGIDMARGAKVSGSRFYFLKGQVARLEQ 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ AL G+T + TP +R E+M + D+E+Y++
Sbjct: 176 ALMWMALDLATANGFTMMTTPTLVRPEIMNGTGFNVKHDDEIYRL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
E DD YL+ TSE + H D L + P +YLG S+C+R+E
Sbjct: 221 ERDDLYLVGTSEVALAGYHMDEILDLSDGPKKYLGWSSCYRREAGAAGKDTRGIIRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
L K +AYRV++ +G L +AA+K D EAW
Sbjct: 281 NKAEMFVYCQVEQAEEIHEQMRALEEEMLQKCGLAYRVIDTAAGDLGTSAARKFDCEAWV 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-------KIEFVHMLNATACATTRV 338
P G +REL S SNC YQ+RRL +R +++ + V LN T ATTR
Sbjct: 341 PTQGTYRELTSTSNCTTYQARRLNIRERTADTVDDAGNVRKGRTRAVATLNGT-LATTRW 399
Query: 339 ICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFV 376
+ AILETHQ G VRIP+ LR ++ V IP V
Sbjct: 400 VVAILETHQQPDGSVRIPEALRPYMGGAEV-----IPVV 433
>gi|289577292|ref|YP_003475919.1| seryl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
gi|289527005|gb|ADD01357.1| seryl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
Length = 423
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 159/336 (47%), Gaps = 73/336 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIV 133
T+P N H SVP +++++N VR G+T +K+ H ++ +D +D EA A V
Sbjct: 102 TIP-NIPHESVPTGDSDEDNVEVRRWGET---RKFDFEPKPHWEIGEELDILDFEAAARV 157
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
G R F KG L+ L+ + L +EK GYT ++ PF + + M QL +F+E+
Sbjct: 158 TGSRFTFYKGLGARLERALINFMLDLHVEKHGYTEVFPPFMVHRRSMLGTGQLPKFEEDA 217
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
+KV G D +LI T+E P+ ++RD+ + LPI + S CFRQ
Sbjct: 218 FKVYGT---------------DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQ 262
Query: 253 ------------------------------------EDLTK---------SIAYRVVNIV 267
E +TK + YRVV I
Sbjct: 263 EAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELEKMTKDAEEVLQLLGLPYRVVAIC 322
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G L A+KK D+E W P G + E+ SCSNC D+Q+RR ++Y K K ++VH
Sbjct: 323 TGDLGFTASKKYDIEVWMPSYGRYVEVSSCSNCEDFQARRANIKY--RPKDGGKAQYVHT 380
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R AILE +Q E G V IP+ LR ++
Sbjct: 381 LNGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|383809346|ref|ZP_09964866.1| serine--tRNA ligase [Rothia aeria F0474]
gi|383447698|gb|EID50675.1| serine--tRNA ligase [Rothia aeria F0474]
Length = 433
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 197/459 (42%), Gaps = 110/459 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D++L R +PE R +Q+ R K+ VD+++E D R +N +N
Sbjct: 1 MIDINLLRE----NPEIFRASQRARGKDEAHVDRILEADAARRASIGTYENLRAEQNAFG 56
Query: 62 KVIGEKMKAKEP--VGDSSTLPG------------------------NHLHPSVPVSNNE 95
K + + K ++P V + L N + VP + E
Sbjct: 57 KQVAKAPKEEKPSLVAQAKELAAHVANAKAASEAKTAEYEELLSSIENLIIDGVP-TGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +++ G E + H+++ +I G+D GA V+G R YFLKG L+
Sbjct: 116 DDFVVLKEVGTPRDFAAEGFEPRDHLEIGELIGGIDMARGAKVSGSRFYFLKGQVARLEQ 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ AL G+T + TP +R E+M + D+E+Y++
Sbjct: 176 ALMWMALDLATANGFTMMTTPTLVRPEIMNGTGFNVKHDDEIYRL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
E DD YL+ TSE + H D L + P +YLG S+C+R+E
Sbjct: 221 ERDDLYLVGTSEVALAGYHMDEILDLSDGPKKYLGWSSCYRREAGAAGKDTRGIIRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
L K +AYRV++ +G L +AA+K D EAW
Sbjct: 281 NKAEMFVYCQVEQAEEIHEQMRALEEEMLQKCGLAYRVIDTAAGDLGTSAARKFDCEAWV 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-------KIEFVHMLNATACATTRV 338
P G +REL S SNC YQ+RRL +R +++ + V LN T ATTR
Sbjct: 341 PTQGTYRELTSTSNCTTYQARRLNIRERTADTVDDAGNVRKGRTRAVATLNGT-LATTRW 399
Query: 339 ICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFV 376
+ AILETHQ G VRIP+ LR ++ V IP V
Sbjct: 400 VVAILETHQQPDGSVRIPEALRPYMGGAEV-----IPVV 433
>gi|347524046|ref|YP_004781616.1| seryl-tRNA synthetase [Pyrolobus fumarii 1A]
gi|343460928|gb|AEM39364.1| seryl-tRNA synthetase [Pyrolobus fumarii 1A]
Length = 463
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 151/308 (49%), Gaps = 65/308 (21%)
Query: 102 RTKGDTEVRKKYSHVDLITMIDGV-DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW 160
R + + +K H D++ + + D+ A VAG R Y+L V L + L+ YA+
Sbjct: 152 RVEHEVIAQKPVGHADMLENVLKLGDTRKAAEVAGSRFYYLFDDLVWLDIALLMYAIDFL 211
Query: 161 IEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIAT 220
++GY + P+ +R V+ V + F + +YK+ E +D YLIAT
Sbjct: 212 TQRGYRLVLPPYMLRHRVIMGVIDIETFKDAIYKI---------------EDEDLYLIAT 256
Query: 221 SEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------------------- 253
SE P+ A++ + + E LPI+ +GVS CFR+E
Sbjct: 257 SEHPLAALYMNEEIREDDLPIKLVGVSPCFRKEAGAGNRDLKGIFRVHQFHKVEQFVFAK 316
Query: 254 ---------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELV 295
+L ++ I YRVV I + L AAKK DLEAW P G +RE+V
Sbjct: 317 PEESSQILEELIRNAEELFKGLGIPYRVVAICAQELGAPAAKKYDLEAWMPAQGRYREMV 376
Query: 296 SCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRI 354
S SNC D+Q+ RL +R +K EK E+VH LN+TA A+TR I AILE Q G + I
Sbjct: 377 SASNCTDWQAYRLNIRL--VRKNMEK-EYVHTLNSTAIASTRTITAILENFQEPDGTIVI 433
Query: 355 PDCLRKFV 362
P LRK++
Sbjct: 434 PKVLRKYL 441
>gi|311112424|ref|YP_003983646.1| serine--tRNA ligase [Rothia dentocariosa ATCC 17931]
gi|310943918|gb|ADP40212.1| serine--tRNA ligase [Rothia dentocariosa ATCC 17931]
Length = 434
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 194/450 (43%), Gaps = 105/450 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D++L R +PE R +Q+ R K+ VD+++E D R +N +N
Sbjct: 1 MIDINLLRE----NPEIFRASQRARGKDEAHVDRILEADAARRASIGTYENLRAEQNAFG 56
Query: 62 KVIGEKMKAKEP--VGDSSTLPG------------------------NHLHPSVPVSNNE 95
K + + K ++P V + L N + VP + E
Sbjct: 57 KQVAKAPKEEKPALVAQAKELAAHVANAKAASEAKTAEYEELLSSIENLIIDGVP-TGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +++ G E + H+++ +I G+D GA V+G R YFLKG L+
Sbjct: 116 DDFVVLKEVGTPRDFAAEGFEPRDHLEIGELIGGIDMARGAKVSGSRFYFLKGQVARLEQ 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ AL G+T + TP +R E+M + D+E+Y++
Sbjct: 176 ALMWMALDLATANGFTMMTTPTLVRPEIMNGTGFNVKHDDEIYRL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
E DD YL+ TSE + H D L + P +YLG S+C+R+E
Sbjct: 221 ERDDLYLVGTSEVALAGYHMDEILDLSDGPKKYLGWSSCYRREAGAAGKDTRGIIRVHQF 280
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
L K +AYRV++ +G L +AA+K D EAW
Sbjct: 281 NKAEMFVYCQVEQAEEIHEQMRALEEEMLQKCGLAYRVIDTAAGDLGTSAARKFDCEAWV 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-------KIEFVHMLNATACATTRV 338
P G +REL S SNC YQ+RRL +R +++ + V LN T ATTR
Sbjct: 341 PTQGTYRELTSTSNCTTYQARRLNIRERTADTVDDVGNVRKGRTRAVATLNGT-LATTRW 399
Query: 339 ICAILETHQTETG-VRIPDCLRKFVPAVYV 367
+ AILETHQ G VRIP+ LR ++ V
Sbjct: 400 VVAILETHQQPDGSVRIPEALRPYMGGAEV 429
>gi|402814530|ref|ZP_10864124.1| serine--tRNA ligase SerS [Paenibacillus alvei DSM 29]
gi|402508377|gb|EJW18898.1| serine--tRNA ligase SerS [Paenibacillus alvei DSM 29]
Length = 425
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 194/439 (44%), Gaps = 100/439 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ L R E G +V + R K +++ E D + R+ + + +N+ S
Sbjct: 1 MLDIKLLRNEYG----RVATALQHRGKTEDMIADFPELDARRREMLQETEQLKNQRNVVS 56
Query: 62 KVIGEKMKAKEP----------VGD-------------------SSTLPGNHLHPSVPVS 92
+ + +K KA E VGD + ++P N H S PV
Sbjct: 57 QEVAKKKKAGESADELIAQMREVGDRIKELDEEIRQIEMQMEQITLSIP-NVPHESTPVG 115
Query: 93 NNEDENGIVR--TKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
+ED+N VR ++ + + +H DL + +D E+ A V G R F KG L+
Sbjct: 116 KSEDDNVEVRRWSEPTSFSFETKAHWDLAQDLGILDFESAAKVTGSRFVFYKGAGARLER 175
Query: 151 GLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + L + GY + P + ++ + QL +F+E+L+K+ G
Sbjct: 176 ALISFMLDVHTTQHGYEEVLPPLIVNRDSLIGTGQLPKFEEDLFKIEGT----------- 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
+ YLI T+E P+ +HRD L + +P Y S+CFR E
Sbjct: 225 ----EYYLIPTAEVPVTNLHRDEILTDDQVPRYYTAYSSCFRSEAGAAGRDTRGLIRQHQ 280
Query: 254 ----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+L K + YRV+ + +G L ++AK DLE W
Sbjct: 281 FNKVELVKLVKPEDSYTELESLTNNAEKILQLLGLPYRVMALCTGDLGFSSAKTYDLEVW 340
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P SG++RE+ SCSN D+Q+RR +R+ + K K EFVH LN + A R + AI+E
Sbjct: 341 LPSSGSYREISSCSNFEDFQARRANIRFRRDTK--SKPEFVHTLNGSGLAIGRTVAAIME 398
Query: 345 THQTETG-VRIPDCLRKFV 362
+Q E G + IP+ LR ++
Sbjct: 399 NYQQEDGSIVIPEVLRPYM 417
>gi|440785146|ref|ZP_20962096.1| seryl-tRNA ligase [Clostridium pasteurianum DSM 525]
gi|440785152|ref|ZP_20962102.1| seryl-tRNA ligase [Clostridium pasteurianum DSM 525]
gi|440218518|gb|ELP57738.1| seryl-tRNA ligase [Clostridium pasteurianum DSM 525]
gi|440218524|gb|ELP57744.1| seryl-tRNA ligase [Clostridium pasteurianum DSM 525]
Length = 426
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 194/443 (43%), Gaps = 106/443 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVEL--VDKVIENDLKWRQFRHKADNFNKFKNL 59
+LDL RT +PE+++K +R ++ +L +DKV+E D K R+ + +NF +N
Sbjct: 1 MLDLKRIRT----NPEEIKKLLTNRGEDFDLADIDKVVELDEKRRKILVEVENFKGKRNK 56
Query: 60 CSKVIGEKMKAKEP----VGDSSTLP------------------------GNHLHPSVPV 91
S I + +A E V D L N H SVP
Sbjct: 57 ESAEIAKLKRAGENADNLVADMKKLSEEIKTLDAEVVKVDEELEYIMMRIPNIPHESVPE 116
Query: 92 SNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
++++N +R G D E++ +H D+ +D +D E VAG R F KG
Sbjct: 117 GKSDEDNVEIRKWGEPRKFDFELK---AHWDIGKDLDILDFERAGKVAGSRFTFYKGLGA 173
Query: 147 CLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
L+ ++ Y L +EK GYT + P+ + + M QL +F+E+ +KV G
Sbjct: 174 RLERSIISYFLDTHVEKHGYTEILPPYMVNRNSMTGTGQLPKFEEDAFKVENNG------ 227
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
+LI T+E P+ + RD L LPI++ S CFR E
Sbjct: 228 ---------FFLIPTAEVPVTNLFRDETLKGEELPIKFAAYSACFRSEAGSAGRDTRGLV 278
Query: 254 --------DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLD 280
+L K + YRV+ I G L AA K D
Sbjct: 279 RQHQFNKVELVKFAKPEQSYEELEKLTADAEEVLQILGLPYRVIRICKGDLGFTAALKYD 338
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
+E W P + E+ SCSN D+QSRR +RY ++ K +K +FVH LN + A R +
Sbjct: 339 IEVWMPSYNRYVEISSCSNFEDFQSRRANIRYKESPK--DKPQFVHTLNGSGVAVGRTVA 396
Query: 341 AILETHQTETG-VRIPDCLRKFV 362
A+LE +Q E G V IP+ LR ++
Sbjct: 397 AVLENYQNEDGTVTIPEILRTYM 419
>gi|348026150|ref|YP_004765955.1| seryl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
gi|341822204|emb|CCC73128.1| seryl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
Length = 426
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 189/423 (44%), Gaps = 93/423 (21%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKE---- 72
E+V++N K+R + VD + D + R+ K + +N +K I + + KE
Sbjct: 12 EEVKENIKNRHAKAD-VDAFVALDNQRREILQKVEAMKNERNTVTKEISQLKRNKENADA 70
Query: 73 ------PVGDS------------------STLPGNHLHPSVPVSNNEDENGIVRTKGDTE 108
+GD + N HPSVPV N++ +N VR G+
Sbjct: 71 QIAAMKKLGDDIDVLDKEVKKVEADMRAIQLMIPNMCHPSVPVGNDDSDNPEVRKWGEPT 130
Query: 109 VR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GY 165
+ +H D+ + +DSE A V G R Y+ G L+ + + L + EK GY
Sbjct: 131 KFDFQPLNHWDVGEKLGILDSERAAKVTGARFYYYIGAGARLERAVYNFMLDQHTEKDGY 190
Query: 166 TPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPI 225
T + P+ + ++ M QL +F E++YK+ +GE++ Y+I T+E P+
Sbjct: 191 TEVIPPYIVNRDSMTGTGQLPKFYEDMYKLNVEGEEM-------------YMIPTAEVPL 237
Query: 226 CAVHRDSWLPEASLPIRYLGVSTCFRQE-------------------------------- 253
+R + A LP+ + ++ CFR E
Sbjct: 238 TNYYRGEIIDGAKLPVYFTAMTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKYVAPETSY 297
Query: 254 -----------DLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNC 300
D+ K++ Y VV + +G + +AAK D+E WFP G +RE+ SCSN
Sbjct: 298 DELDKLTNNAEDILKALGLPYHVVCLCTGDIGFSAAKTFDVEVWFPAQGKYREISSCSNT 357
Query: 301 LDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLR 359
D+Q+RR +R+ +T K K EFVH LN + A R + AILE +Q G V +P+ LR
Sbjct: 358 EDFQARRANIRFRRTPK--SKPEFVHTLNGSGLAVGRTVAAILENYQQADGSVIVPEVLR 415
Query: 360 KFV 362
++
Sbjct: 416 PYM 418
>gi|256846211|ref|ZP_05551669.1| seryl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
gi|256719770|gb|EEU33325.1| seryl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
Length = 424
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 194/456 (42%), Gaps = 114/456 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
++L+L R + E +++ K+R NV++ D +E D K R+ + +N + +N
Sbjct: 3 IMLELKFMRE----NVEMLKEMLKNRNSNVDM-DTFVELDSKRREILSEVENLKRERNNV 57
Query: 61 SKVIGEKMKAK----------------------------EPVGDSSTLPGNHLHPSVPVS 92
S I K K E + D N HPS P+
Sbjct: 58 SAEIANLKKEKKDANHLIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHPSTPIG 117
Query: 93 NNEDENGIVRTKGDTEVRKKY-----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+ED N +R G V KK+ SH D+ + +D E GA ++G R +G A
Sbjct: 118 LDEDYNLEIRKWG---VPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAAR 174
Query: 148 LQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + L +E+GYT TPF ++ EV + QL +F+E++YK
Sbjct: 175 LERALINFMLDVHTLEEGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTT---------- 224
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
DD YLI+TSE + +HR L +A LP Y S CFR+E
Sbjct: 225 ------DDMYLISTSEITMTNIHRKEILEQAELPKYYTAYSPCFRREAGSYGKDVKGLIR 278
Query: 254 --------------------DLTK------------SIAYRVVNIVSGALNHAAAKKLDL 281
+L K + YRV+ + SG L +AAK DL
Sbjct: 279 LHQFNKVEMVKITDAESSYDELEKMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDL 338
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W P +RE+ SCSNC +Q+RR+ ++Y ++ EF H LN + A R + A
Sbjct: 339 EVWLPSQNKYREISSCSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVA 394
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
I+E +Q E G + VP V + G + +K
Sbjct: 395 IMENYQQEDGSFL-------VPKVLIPYMGGVDVIK 423
>gi|312792870|ref|YP_004025793.1| seryl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180010|gb|ADQ40180.1| seryl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 420
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 195/439 (44%), Gaps = 103/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL RT +PEKV++ R K++ + ++E D K R+ + ++ +N S
Sbjct: 1 MLDLKYIRT----NPEKVQEGLSKRNKDISIA-PILELDEKRRKLLAEVESLKALQNQKS 55
Query: 62 KVI----------GEKMKAKEPVGDSS-------------------TLPGNHLHPSVPVS 92
K + E M + + D T+P N H SVPV
Sbjct: 56 KEVPRLKKEGKDVTELMNELKELSDKIKELDSRFKEVEDEIEKILLTIP-NIPHESVPVG 114
Query: 93 NNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
++ EN VR GD V + H ++ + +D E + V+G R F +G L+
Sbjct: 115 KDDTENVEVRRWGDVRVPDFEVKPHWEIGMSLGILDFERASKVSGSRFTFYRGLGARLER 174
Query: 151 GLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + L IEK GYT ++ PF + ++ M QL +F+E+ +K
Sbjct: 175 ALINFMLDLHIEKHGYTEIFPPFLVARKSMIGTGQLPKFEEDAFKTT------------- 221
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------ 251
DD +LI T+E P+ HR+ L E LPI+Y+ S CFR
Sbjct: 222 ---DDYFLIPTAEVPVTNYHREEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQ 278
Query: 252 -------------------------QEDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAW 284
ED+ K + YRVV + SG L ++AK D+E W
Sbjct: 279 FNKVELVKFAKPEESYDELEKLTADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVW 338
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P G + E+ SCSN YQ+RR +R+ ++ + K+++VH LN + A R + AILE
Sbjct: 339 MPSYGRYVEISSCSNFESYQARRANIRF---RRKDGKLDYVHTLNGSGLAVGRTLAAILE 395
Query: 345 THQTETG-VRIPDCLRKFV 362
Q + G V +P+ LRK++
Sbjct: 396 NFQQKDGTVVVPEVLRKYM 414
>gi|388566451|ref|ZP_10152896.1| seryl-tRNA synthetase [Hydrogenophaga sp. PBC]
gi|388266465|gb|EIK92010.1| seryl-tRNA synthetase [Hydrogenophaga sp. PBC]
Length = 434
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 153/332 (46%), Gaps = 68/332 (20%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGR 137
N H SVPV +E N VR G D VR HVDL + G+D E GA+++G R
Sbjct: 110 NLPHESVPVGEDESGNVEVRRWGTPRSFDFPVR---DHVDLGAPL-GLDFETGALLSGSR 165
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIE-KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVI 196
FL+GP L L Q+ L E GYT YTP+ + +EV++ QL +F ++++ V
Sbjct: 166 FSFLRGPVARLHRALAQFMLDLQTEAHGYTECYTPYIVNREVLEGTGQLPKFKDDMFWVS 225
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLT 256
G+ + +PE +YLI+TSE + R+ L E+ LPI+ S CFR E +
Sbjct: 226 RGGD---EDSPE------QYLISTSEISLTNTVRERVLAESDLPIKLTAHSPCFRSEAGS 276
Query: 257 KS---------------------------------------------IAYRVVNIVSGAL 271
+ YRV+ + +G +
Sbjct: 277 AGRDTRGMIRQHQFDKVEMVQITHPDTSYEALEQMVGHAEAVLQKLELPYRVIALCTGDM 336
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
AAK DLE W P +RE+ SCSNC +Q+RR+ R+ K K E VH LN +
Sbjct: 337 GFGAAKTYDLEVWVPAQNTYREISSCSNCEAFQARRMQARF---KNAQGKNELVHTLNGS 393
Query: 332 ACATTRVICAILETHQTETG-VRIPDCLRKFV 362
A R + A+LE HQ G + +P LR ++
Sbjct: 394 GLAVGRALVAVLENHQNADGSISVPAALRPYL 425
>gi|120406601|ref|YP_956430.1| seryl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
gi|166222752|sp|A1TGX4.1|SYS_MYCVP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|119959419|gb|ABM16424.1| seryl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
Length = 419
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 185/434 (42%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + R +P+ VR +Q R ++ LVD + + D R ADN + S
Sbjct: 1 MIDLKVLRE----NPDAVRASQLARGEDPGLVDALADADTARRAAISAADNLRAEQKSAS 56
Query: 62 KVIGEKMKAKEPV--------------------------GDSSTLPGNHLHPSVPVSNNE 95
+++G+ + P + N + VP + E
Sbjct: 57 RLVGKASPEERPALLAAAKELADKVRAAESAQAEAEKAYSAAHMAISNVIIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ T G+ T + H++L + +D E GA V+G R YFL G LQ+GL Q
Sbjct: 116 DDFVVLDTVGEPTALTDPKDHLELGESLGLIDMERGAKVSGSRFYFLTGFGALLQLGLFQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A+ E G+T + P +R E+M L +E+Y+V E DD
Sbjct: 176 LAVRTATENGFTLVIPPVLVRPEIMSGTGFLGAHADEVYRV---------------EADD 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H L + P RY G S+CFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHSGEILDLSEGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV++I +G L +AA+K D EAW P
Sbjct: 281 GFVYCRPEEAEAEHDRLLGWQRQMLGLIEVPYRVIDIAAGDLGSSAARKFDCEAWVPTQQ 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL VRY + N K + LN T ATTR + AILE HQ
Sbjct: 341 TYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT-LATTRWLVAILENHQQP 396
Query: 350 TG-VRIPDCLRKFV 362
G VRIP+ L +V
Sbjct: 397 DGSVRIPEALVPYV 410
>gi|326384326|ref|ZP_08206007.1| seryl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
gi|326196924|gb|EGD54117.1| seryl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
Length = 417
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 190/432 (43%), Gaps = 94/432 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + R +P+ VR +Q+ R ++ LVD++++ D R +AD +
Sbjct: 1 MIDLKIVRE----NPDLVRASQRARGEDPGLVDQLLDADAARRSAISEADALRTEQKSLG 56
Query: 62 KVIGEKMK---------------------AKEPVGDSSTLPGNHLHPSVPV---SNNEDE 97
K++G+ AK+ D+++ + ++ + ED+
Sbjct: 57 KLVGKASGDEKAALLAKGKDLADQVKAAVAKQNKADAASQAAHRAISNIITEAPAGGEDD 116
Query: 98 NGIVRTKGD-TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYA 156
++ G+ T + H++L + +D G V+G R YFL G LQ+GL+ A
Sbjct: 117 YIVLEHVGEPTAIDDPKDHLELGESLGLIDMARGVKVSGSRFYFLTGLGAMLQLGLLNMA 176
Query: 157 LSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKY 216
+K G+T + P ++ E+M L +E+Y + + DD Y
Sbjct: 177 AAKATANGFTLMIPPVLVKPEIMGGTGFLGAHSDEIYHL---------------DDDDLY 221
Query: 217 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------------- 253
L+ TSE P+ H+D L ++ P RY G STCFR+E
Sbjct: 222 LVGTSEVPLAGYHKDEILDLSNGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGF 281
Query: 254 --------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAF 291
D+ +I YRV+++ G L +AA+K D EAW P G +
Sbjct: 282 IYCKPEDAEAEHQRILGWEKDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQGTY 341
Query: 292 RELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG 351
REL S SNC +Q+RRL VRY + N K + LN T ATTR + AILE HQ G
Sbjct: 342 RELTSTSNCTTFQARRLSVRY---RDENGKPQTAATLNGT-LATTRWLVAILENHQQPDG 397
Query: 352 -VRIPDCLRKFV 362
V +P L +FV
Sbjct: 398 SVVLPPELARFV 409
>gi|356508070|ref|XP_003522784.1| PREDICTED: seryl-tRNA synthetase-like [Glycine max]
Length = 506
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 168/348 (48%), Gaps = 82/348 (23%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N HP VP+ ED + I + G + K+S H+ L +D D +A A V+G +
Sbjct: 172 NMTHPDVPI-GGEDCSTIRKMVGSS---PKFSFPVKDHLQLGKELDLFDFDAAAEVSGSK 227
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEELYKVI 196
Y+LK AV L++ LV + LS+ +++G+TPL TP +R V+++ Q + ++Y +
Sbjct: 228 FYYLKNEAVLLEMALVNWTLSEVMKRGFTPLTTPELVRSSVVEKCGFQPRANNTQIYSI- 286
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR----- 251
DS D+ LI T+E P+ +H DS L ++ LP++Y+ S CFR
Sbjct: 287 ------ADS--------DQCLIGTAEIPVGGLHMDSILSDSLLPLKYVAFSHCFRTEAGA 332
Query: 252 --------------------------------------QEDLTKSIA--YRVVNIVSGAL 271
+EDL S+ ++ +++ S L
Sbjct: 333 AGTATRGLYRVHQFSKVEMFIFCRPEESEHYHQELITIEEDLFSSLGLHFKTLDMASEDL 392
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY--------GQTKKMNEKI- 322
A +K D+EAW PG F E+ S SNC DYQSRRL +RY KK +
Sbjct: 393 GAPAYQKFDVEAWMPGLERFGEISSASNCTDYQSRRLGIRYRPASEAQATSAKKSKGNLA 452
Query: 323 --EFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
+FVH LNATACA R+I +LE +Q E G V IP+ LR F+ + V
Sbjct: 453 PPQFVHTLNATACAVPRMIICLLENYQQEDGSVLIPEPLRPFMGGLSV 500
>gi|379003433|ref|YP_005259105.1| seryl-tRNA synthetase [Pyrobaculum oguniense TE7]
gi|375158886|gb|AFA38498.1| seryl-tRNA synthetase [Pyrobaculum oguniense TE7]
Length = 449
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 187/444 (42%), Gaps = 114/444 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADN----FNKF-------------- 56
+P+ VRK R + LV+K + D +WRQ + + D +NK
Sbjct: 12 NPDAVRKVLVARRMDPSLVEKFLGLDERWRQLKKEVDELRHEYNKLSREGARAPPERRRE 71
Query: 57 -----KNLCSKV------IGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKG 105
K L +++ + + KA+E V S N +H SVP ++ VR G
Sbjct: 72 LAERAKELAARLEKVEKELEDVEKAREEVLWSFP---NLIHESVPTCPEGVDSVPVRYWG 128
Query: 106 DTEV-----------------RKKYSHVDLITMI-DGVDSEAGAIVAGGRGYFLKGPAVC 147
+V R H D+ M+ D+ VAG R Y+L V
Sbjct: 129 VVKVANNAAELPRGVDYVVVERPPVGHADMAEMVLKMADTLKAGEVAGSRFYYLFDDLVW 188
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L L YA+ ++G+ P+ P+ ++ +V++ V F + +YK+ G
Sbjct: 189 LDFALAMYAMDYLTQRGFRPVIPPYMLKFDVIRRVLDFDTFKDAIYKIDG---------- 238
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------- 253
+D YLIAT+E I A L E LP Y+G S CFR+E
Sbjct: 239 -----EDLYLIATAEHGIAAYLYKRELVEEELPQLYVGWSPCFRKEAGAGNRDLKGIFRV 293
Query: 254 ----------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLE 282
++TK+ + YRVVNI + L AAKK D+E
Sbjct: 294 HIFHKVEQFVFSLPEESWKWHEEITKNTEELIRGLGLPYRVVNICAHDLGAPAAKKYDIE 353
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
W+P G +REL SCSN D+QS RL +R + K EFVH LN T ATTR I AI
Sbjct: 354 VWYPAQGMYRELASCSNVTDWQSYRLGIR---VTRKGMKREFVHTLNCTGLATTRTITAI 410
Query: 343 LETHQTETG-VRIPDCLRKFVPAV 365
LE Q E G V IP LR ++ +
Sbjct: 411 LENFQREDGAVEIPKALRPYLEPI 434
>gi|289549035|ref|YP_003474023.1| seryl-tRNA synthetase [Thermocrinis albus DSM 14484]
gi|289182652|gb|ADC89896.1| seryl-tRNA synthetase [Thermocrinis albus DSM 14484]
Length = 424
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 200/439 (45%), Gaps = 101/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRF-KNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
+LD++L R + P VR+ + R + +L+D+ + D + R+ + + +N
Sbjct: 1 MLDVELIRKQ----PLYVRQKLERRDPQYAQLLDQFLALDTRRRELIKEIEQLRFLRNTK 56
Query: 61 SKVIGE----------------KMKAKEPVGDSST-------------LPGNHLHPSVPV 91
SK IGE +++ K + DS +P N H SVPV
Sbjct: 57 SKQIGELKKKGENTSLLEEEVKELREKIDLMDSELREVERQAQDLLLRIP-NLPHDSVPV 115
Query: 92 SNNEDENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+E +N ++ G+ + H ++ ++ +D E GA ++G R LKG L+
Sbjct: 116 GEDEKDNVEIKRWGEPPSFTFTPKPHWEIGEYLNILDFERGAKLSGSRFTVLKGWGAKLE 175
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + L +GYT + TP ++ E++ QL +F+E+LYK E+
Sbjct: 176 RALINFMLDLHTSRGYTEVMTPHLVKPEILVGTGQLPKFEEDLYKC------------ER 223
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D+L YLI T+E + + R+ L E LPI + C+R+E
Sbjct: 224 DQL---YLIPTAEVTLTNLFREEILREEDLPIYLTAYTPCYRREAGAYGKDVRGIIRQHQ 280
Query: 254 ----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+L K + YRVV + +G L ++AK D+E W
Sbjct: 281 FDKVELVKIVKPEDSYKELERLLEDAEEVLRLLQLPYRVVELCTGDLGFSSAKTYDIEVW 340
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
FP G +RE+ SCSNC D+Q+RR+ +RY + N ++ FVH LN + A RV+ AILE
Sbjct: 341 FPSQGRYREVSSCSNCEDFQARRMNLRY---RDANGRLRFVHTLNGSGLAVGRVLAAILE 397
Query: 345 THQTETG-VRIPDCLRKFV 362
+Q E G V +P LR ++
Sbjct: 398 NYQREDGSVEVPPVLRDYL 416
>gi|385811217|ref|YP_005847613.1| seryl-tRNA synthetase [Ignavibacterium album JCM 16511]
gi|383803265|gb|AFH50345.1| Seryl-tRNA synthetase [Ignavibacterium album JCM 16511]
Length = 426
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 206/448 (45%), Gaps = 115/448 (25%)
Query: 2 VLDLDLFRTEKGGDPEKVR-----KNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKF 56
+LDL R +PEKV+ KN+KDR VD+++E D + R+ +++
Sbjct: 1 MLDLKFIRE----NPEKVKQGIANKNEKDR------VDEILELDKQRRELIAQSEELKSK 50
Query: 57 KNLCSKVIGEKMKAKE----------PVGDSST-------------------LPGNHLHP 87
+N S I + KA + V DS T +P N H
Sbjct: 51 RNQVSAEIPKLKKAGQDVTEILAEMKKVSDSITELDVKLREVENQLNEILMYIP-NLPHK 109
Query: 88 SVPVSNNEDENGIVRT---KGDT---EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
SVP+ + +EN VR +G + E K H++L ++ +D E GA V+G
Sbjct: 110 SVPIGESSEENVEVRQWLPEGFSFKWENGKPLDHIELGKKLNILDFERGAKVSGSGFPVY 169
Query: 142 KGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
KG L+ L+ + L ++ GY+ ++ PF + ++ M+ QL + +E++Y +
Sbjct: 170 KGKGATLERALINFMLDYHLQHHGYSEIFPPFLVNRDSMRGTGQLPKMEEDMYHI----- 224
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ-------- 252
EKD L Y I T+E PI +HRD L E LPI+Y+G S CFR+
Sbjct: 225 -------EKDGL---YPIPTAEVPITNLHRDEVLNEKDLPIKYVGYSACFRREAGSYGKE 274
Query: 253 -----------------------------------EDLTKS--IAYRVVNIVSGALNHAA 275
ED+ ++ I YR++ + +G L+ AA
Sbjct: 275 SKGFLRVHQFNKVEMVKFVKPETSYNELELLVKDAEDILQALKIPYRILMLCTGDLSFAA 334
Query: 276 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACAT 335
AK D+E W P + E SCSN D+Q+RR ++Y + +K+EFVH LN + AT
Sbjct: 335 AKCYDIETWSPAENRWLEASSCSNFEDFQARRANIKY--RNEQTKKLEFVHTLNGSGLAT 392
Query: 336 TRVICAILETHQTETG-VRIPDCLRKFV 362
+R++ +ILE +QT G V +P L+K+
Sbjct: 393 SRLMVSILENYQTPEGKVIVPPILQKYT 420
>gi|183985354|ref|YP_001853645.1| seryl-tRNA synthetase [Mycobacterium marinum M]
gi|238690931|sp|B2HMM1.1|SYS_MYCMM RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|183178680|gb|ACC43790.1| seryl-tRNA synthetase SerS [Mycobacterium marinum M]
Length = 419
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 187/433 (43%), Gaps = 95/433 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP+ VR++Q R ++ LVD ++ D R AD+ + S
Sbjct: 1 MIDLKLLRE----DPDVVRRSQLSRGEDPALVDALLTADTARRTAISTADSLRAEQKAAS 56
Query: 62 KVIG------------------EKMKAKEPVGDSSTLPGNHLHPSVP-------VSNNED 96
K +G E++KA E + H ++P + ED
Sbjct: 57 KGVGGASPEERPALLQRAKDLAEQVKAAEATQSETEAAFTAAHMAIPNVILDGVPAGGED 116
Query: 97 ENGIVRTKGDTE-VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
+ ++ G+ + H++L + +D GA VAG R YFL G LQ+GL+Q
Sbjct: 117 DYAVLEVVGEPRAIDNPKDHLELGESLGLIDMARGAKVAGSRFYFLTGQGALLQLGLLQL 176
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
AL ++ G+ P+ P +R EVM L +E+Y++ E DD
Sbjct: 177 ALRLAVDNGFIPMIPPVLVRPEVMAGTGFLGAHADEVYRL---------------EADDL 221
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------------- 258
YL+ TSE P+ H D + + P+RY G S+CFR+E +
Sbjct: 222 YLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEG 281
Query: 259 ----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
+ YRV+++ +G L +AA+K D EAW P G
Sbjct: 282 FVYCTPADAEAEHQRLLAWQREMLAQIEVPYRVIDVAAGDLGASAARKFDCEAWVPTQGT 341
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL RY + N K + LN T TTR + +ILE HQ
Sbjct: 342 YRELTSTSNCTTFQARRLATRY---RDANGKPQIAATLNGT-LGTTRWLVSILENHQQPD 397
Query: 351 G-VRIPDCLRKFV 362
G VR+P L FV
Sbjct: 398 GSVRVPAALVGFV 410
>gi|452957714|gb|EME63077.1| seryl-tRNA ligase [Rhodococcus ruber BKS 20-38]
Length = 420
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 183/434 (42%), Gaps = 96/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R +P+ VR +Q+ R ++ LVD ++E D R DN +
Sbjct: 1 MIDLKFLRE----NPDAVRASQRTRGEDPGLVDALLEADAARRAAVLAGDNIRAEQKALG 56
Query: 62 KVIGEKMKAKEP--VGDSSTLPGN------------------HLHPSVPV-----SNNED 96
K +G+ + P + + L N H+ S V + ED
Sbjct: 57 KKVGQASPEERPALLEGAKELAANVKKLEAEQHAAEEALERAHMAISNIVQEGAPAGGED 116
Query: 97 ENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
+ + T G+ T + H+ L + +D E GA V+G R YFL G LQ+G++Q
Sbjct: 117 DFVTLETVGELPTFDFEPKDHLTLGESLGLIDMERGAKVSGARFYFLTGYGALLQLGMLQ 176
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A + + G+ + P +R E+MQ L +E+Y + DD
Sbjct: 177 LAAQRAVANGFQMMIPPVLVRPEIMQGTGFLGAHADEIYHLAD---------------DD 221
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------------- 253
YL+ TSE P+ H L + P RY G S+CFR+E
Sbjct: 222 LYLVGTSEVPLAGYHSGEILDLSGGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVE 281
Query: 254 ----------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
D+ +I YRV+++ G L +AA+K D EAW P
Sbjct: 282 MFVYCKPEDATAEHQRLLAWERDMLAAIEVPYRVIDVAGGDLGSSAARKFDCEAWVPTQE 341
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL VRY + N K + LN T ATTR + AILE HQ
Sbjct: 342 RYRELTSTSNCTTFQARRLGVRY---RDENGKPQIAATLNGT-LATTRWLVAILENHQQA 397
Query: 350 TG-VRIPDCLRKFV 362
G VR+P L FV
Sbjct: 398 DGSVRVPSALVPFV 411
>gi|51598487|ref|YP_072675.1| seryl-tRNA synthetase [Borrelia garinii PBi]
gi|67461723|sp|Q662D8.1|SYS_BORGA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|51573058|gb|AAU07083.1| seryl-tRNA synthetase [Borrelia garinii PBi]
Length = 425
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 163/340 (47%), Gaps = 77/340 (22%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N L P VP+ N+E++N ++ G V K+ H++L +D +D + V+G +
Sbjct: 104 NILSPDVPIGNSEEDNFEIKKVG---VVPKFDFKPKDHLELGRDLDLLDFDRAREVSGSK 160
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEE-LYKVI 196
Y+LK AV L++ L+ ++L+K EKG+ TP R+ ++ + + DE +YK+
Sbjct: 161 FYYLKNEAVFLEIALINFSLNKLREKGFDVFITPDVAREFIVDGIGFNPRGDESNIYKI- 219
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--- 253
E DKYL+ TSE + + + + + +LPI+ G S CFR+E
Sbjct: 220 --------------ESTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAGA 264
Query: 254 --DLTKS----------------------------------------IAYRVVNIVSGAL 271
L+K I YRV+NI S L
Sbjct: 265 YGQLSKGLYRVHQFSKVEMFCFCKAEESQVIHDEFLSIQEQIFTELEIPYRVLNICSFDL 324
Query: 272 NHAAAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
A KK D+EAW PG G++ E+ S SNC DYQSRRL +RY N +F HM+
Sbjct: 325 GSPAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMV 381
Query: 329 NATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
N TA ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 382 NGTAIATTRVIISILENFQDEKGGVRIPKSLVKYTGFGYI 421
>gi|87310730|ref|ZP_01092857.1| seryl-tRNA synthetase [Blastopirellula marina DSM 3645]
gi|87286487|gb|EAQ78394.1| seryl-tRNA synthetase [Blastopirellula marina DSM 3645]
Length = 426
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 184/418 (44%), Gaps = 99/418 (23%)
Query: 26 RFKNVEL-VDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEP----------- 73
R + V+ V KV + RQ + + ++FN+ N SK+IG+ + P
Sbjct: 19 RLRGVDADVAKVAALETARRQKQQETEDFNRRANETSKLIGKASAEERPQIIEEGRKLRE 78
Query: 74 ---------------VGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRK----KYS 114
+ D L N HP+ P+ ++ N +R +G TE RK
Sbjct: 79 EKDAAQKEVDRLDAEIVDLLRLIPNLTHPAAPIGADDQANLELR-RGKTEPRKFDFKVLD 137
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFM 174
HV+L +D +D E+GA VAG YFLK AV L++ L +Y L +++G+TP TP
Sbjct: 138 HVELGENLDLIDFESGAQVAGAGFYFLKNEAVLLELALQRYVLEILMKEGFTPTITPDLA 197
Query: 175 RKEVMQEVAQLAQFDE-ELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 233
R E++ V + + E ++Y V E D L+AT+E + ++
Sbjct: 198 RTEILHGVGFIPRGPETQIYSV---------------ENTDLNLVATAEITLGGMNAGKV 242
Query: 234 LPEASLPIRYLGVSTCFRQE---------------DLTK--------------------- 257
L LP Y G+S C+R E TK
Sbjct: 243 LEAEDLPKLYCGMSHCYRTEAGSAGRASRGLYRVHQFTKVEMFAFTLPDQSDATLDKFCD 302
Query: 258 ---------SIAYRVVNIVSGALNHAAAKKLDLEAWFPG---SGAFRELVSCSNCLDYQS 305
I YRVV+ +G L A +K DLEAW PG +G + E+ S SNC DYQ+
Sbjct: 303 LECQIFDGLGIPYRVVDTATGDLGGPAYRKFDLEAWMPGRGEAGEWGEVTSTSNCTDYQA 362
Query: 306 RRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
RRL +RY K + +F H LN TA A +R I A+LE +Q G + IP LR F+
Sbjct: 363 RRLNIRY--RTKGEKGTQFAHTLNGTAIAISRGIIAVLENYQQADGSIEIPAVLRSFM 418
>gi|323358560|ref|YP_004224956.1| seryl-tRNA synthetase [Microbacterium testaceum StLB037]
gi|323274931|dbj|BAJ75076.1| seryl-tRNA synthetase [Microbacterium testaceum StLB037]
Length = 421
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 194/444 (43%), Gaps = 102/444 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DPE V+++Q R ++ + VD+ + D R + +N
Sbjct: 1 MIDLTLLRE----DPELVKRSQIARGESPDSVDEALAADRDRRAAITAFEELRAAQNAHG 56
Query: 62 KVIGEKMKAKEP--VGDSSTLPG------------------------NHLHPSVPVSNNE 95
K + + K ++ V ++ L N + VP + E
Sbjct: 57 KRVAQAPKEEKAALVAEAKQLSEQVKAAQHAVGEAEAAADAALAKIENIVLDGVP-AGGE 115
Query: 96 DENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
+ +RT G+ T + H++L M+ +D E G V+G R YFL G L++ L+
Sbjct: 116 ENFVTLRTHGEIPTYDFEPRDHLELGEMLGAIDMERGTKVSGSRFYFLTGIGARLELALM 175
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
AL + ++ G+TP+ P +R EVM+ L Q +E+Y + P+ +
Sbjct: 176 TLALDRALQAGFTPMIPPTLVRPEVMRGTGFLGQHADEVYHL-----------PK----E 220
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------------- 253
D YL+ TSE P+ H D L RY G STC+R E
Sbjct: 221 DLYLVGTSEVPLAGYHMDEILDLERGAKRYAGWSTCYRSEAGSYGKDTRGIIRVHQFNKL 280
Query: 254 ---------------------------DLTKSIAYRVVNIVSGALNHAAAKKLDLEAWFP 286
DL +AYRV+++ +G L +AA+K D+EAW P
Sbjct: 281 EMFVYTDPADAEAEHDRLVAMQEAMLQDL--GLAYRVIDVAAGDLGSSAARKFDIEAWVP 338
Query: 287 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
A+REL S SNC YQ+RRL R+ + K V LN T ATTR I A+LETH
Sbjct: 339 TQDAYRELTSTSNCTTYQARRLNTRF---RPEGSKTAPVATLNGT-LATTRWIVALLETH 394
Query: 347 QTETG-VRIPDCLRKFVPAVYVNE 369
Q E G V +P+ LR ++ + V E
Sbjct: 395 QREDGSVTVPEVLRPYLGGLEVME 418
>gi|15605830|ref|NP_213207.1| seryl-tRNA synthetase [Aquifex aeolicus VF5]
gi|3915066|sp|O66647.1|SYS_AQUAE RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|2982982|gb|AAC06595.1| seryl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 425
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 196/444 (44%), Gaps = 110/444 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKN-VELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
++D++L R + P+ V++ R K V LVDKV+E D + R+ + + +N
Sbjct: 1 MIDINLIREK----PDYVKERLATRDKELVSLVDKVLELDKRRREIIKRLEALRSERNKL 56
Query: 61 SKVIGEKMKAKEPVGDSSTLPG-------------------------------NHLHPSV 89
SK IG K K D++ + N HPSV
Sbjct: 57 SKEIG---KLKREGKDTTEIQNRVKELKEEIDRLEEELRKVEEELKNTLLWIPNLPHPSV 113
Query: 90 PVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
PV +E +N VR G+ +K+ H ++ + +D + GA ++G R + G
Sbjct: 114 PVGEDEKDNVEVRRWGEP---RKFDFEPKPHWEIGERLGILDFKRGAKLSGSRFTVIAGW 170
Query: 145 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGD 204
L+ L+ + L +KGY + P ++ E++ QL +F+E+LYK
Sbjct: 171 GARLERALINFMLDLHTKKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKC--------- 221
Query: 205 SAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------- 253
E D+ YLI T+E P+ ++R+ L E +LPI + C+R+E
Sbjct: 222 ------ERDNLYLIPTAEVPLTNLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGI 275
Query: 254 ---------DLTK-------------------------SIAYRVVNIVSGALNHAAAKKL 279
+L K + YRVV + +G L +AAK
Sbjct: 276 IRQHQFDKVELVKIVHPDTSYDELEKLVKDAEEVLQLLGLPYRVVELCTGDLGFSAAKTY 335
Query: 280 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVI 339
D+E WFP +RE+ SCSNC D+Q+RR+ R+ +K K FVH LN + A R +
Sbjct: 336 DIEVWFPSQNKYREISSCSNCEDFQARRMNTRFKDSK--TGKNRFVHTLNGSGLAVGRTL 393
Query: 340 CAILETHQTETG-VRIPDCLRKFV 362
AILE +Q E G V +P+ LR +V
Sbjct: 394 AAILENYQQEDGSVVVPEVLRDYV 417
>gi|423456648|ref|ZP_17433498.1| seryl-tRNA synthetase [Bacillus cereus BAG5X1-1]
gi|401128735|gb|EJQ36423.1| seryl-tRNA synthetase [Bacillus cereus BAG5X1-1]
Length = 424
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 150/326 (46%), Gaps = 66/326 (20%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
H S PV ED+N + RT G+ + + H DL T + +D E V G R F KG
Sbjct: 109 HESAPVGETEDDNVVARTWGEVKEFTYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKG 168
Query: 144 PAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 169 AGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI------- 221
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 --------ESEDYFLIPTAEVPVTNMHRDEILSKEQLPIRYAAFSSCFRSEAGSAGRDTR 273
Query: 254 -----------DLTK-------------------------SIAYRVVNIVSGALNHAAAK 277
+L K + YRV+++ +G L AAK
Sbjct: 274 GLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAK 333
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A R
Sbjct: 334 KYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLAIGR 391
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
+ AILE +Q E G + IP+ LR ++
Sbjct: 392 TVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|406991107|gb|EKE10665.1| hypothetical protein ACD_15C00217G0013 [uncultured bacterium]
Length = 423
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 196/437 (44%), Gaps = 98/437 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ R + E VR N K+R NV+ +D+ + D + R+ ++ +N S
Sbjct: 1 MLDIKFIRE----NAELVRDNCKNRLSNVD-IDEFLNLDAEIRKMETALEDLRAKRNAAS 55
Query: 62 KVIG-----EKMKA---KEPVGDSSTLP------------GNHLHPSVPVSNNEDENGIV 101
K E+MKA + V + + +P N HP V VS NED+N ++
Sbjct: 56 KTKPSPEQIEEMKAVGAEIKVIEENLVPMKARFREIWMSIPNMTHPEVAVSLNEDDNPVL 115
Query: 102 RTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSK 159
T + V + HV L + D +D E V+G + Y+LK ++ L+QYAL
Sbjct: 116 DTFMEPTVFDFEALDHVQLAEINDLIDFERATKVSGAKFYYLKNELALMEFALIQYALQI 175
Query: 160 WIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIA 219
++KG+ P TP ++EV++ + + G+ +V + E D L+
Sbjct: 176 AMKKGFVPFSTPDLAKREVLEGLG---------FNPRGESTQVYNI-----ENSDLCLVG 221
Query: 220 TSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------DLTK------- 257
T+E + H D L E LP +Y+ VS CFR E TK
Sbjct: 222 TAEITMGGYHMDEVLDEKDLPKKYVAVSHCFRTEAGAYSKFSKGIFRVHQFTKIEMFQYV 281
Query: 258 -----------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGS------ 288
I +RV++ + L + + DLEAW PG
Sbjct: 282 MPEKSEEAHREMLAIEREIFEGLQIPFRVIDHCTADLGSPSIRTYDLEAWMPGKPNKDGG 341
Query: 289 -GAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
G + E+ S SNC DYQ+R L ++Y K EK +++HMLN TA A +R + AILE +Q
Sbjct: 342 MGDWAEITSTSNCTDYQARGLNIKY----KSGEKKDYLHMLNGTAIAVSRALIAILENYQ 397
Query: 348 TETG-VRIPDCLRKFVP 363
G V+IP+ L+KF+P
Sbjct: 398 RSDGSVKIPEALKKFMP 414
>gi|301063988|ref|ZP_07204453.1| serine--tRNA ligase [delta proteobacterium NaphS2]
gi|300441899|gb|EFK06199.1| serine--tRNA ligase [delta proteobacterium NaphS2]
Length = 428
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 151/328 (46%), Gaps = 66/328 (20%)
Query: 87 PSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
PSVPV +E +N ++RT GD + H ++ + +D A ++G R +G
Sbjct: 109 PSVPVGKDEKDNPVIRTWGDIRDFPFEALPHWEIGENLGILDFARAAKLSGARFALYRGA 168
Query: 145 AVCLQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
L+ L+ + + E GYT + PF + M QL +F+E+L+KV G+
Sbjct: 169 GAALERALINFMIHIHTTEHGYTEILPPFMVNAASMFGTGQLPKFEEDLFKVKGR----- 223
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------- 253
D YLI T+E P+ +HR+ L E LP Y+ + CFR E
Sbjct: 224 ----------DLYLIPTAEVPVTNMHREEVLQEDDLPAAYVAYTPCFRSEAGSYGKDTRG 273
Query: 254 --------------------------DLTKS---------IAYRVVNIVSGALNHAAAKK 278
LT++ + YRVV + +G + +AAK
Sbjct: 274 LIRQHQFNKVELVKFSKPEDSYHELEKLTQNAEEILRRLELPYRVVTLCTGDIGFSAAKT 333
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLE W PG G +RE+ SCSN +++Q+RR +R+ + K E VH LN + A R
Sbjct: 334 YDLEVWLPGQGLYREISSCSNFVEFQARRANIRFKRKGKSGN--ELVHTLNGSGLAVGRT 391
Query: 339 ICAILETHQTETG-VRIPDCLRKFVPAV 365
+ AILE +Q E G V IP+ LR F+ +
Sbjct: 392 VVAILENYQREDGSVEIPEALRPFMGGI 419
>gi|373253250|ref|ZP_09541368.1| seryl-tRNA synthetase [Nesterenkonia sp. F]
Length = 429
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 185/433 (42%), Gaps = 96/433 (22%)
Query: 16 PEKVRKNQKDRFKNVELVDKVI-------ENDLKWRQFRHKADNFNK------------- 55
PEK R +Q+ R ++ LVD VI E ++ R + F K
Sbjct: 11 PEKYRASQRARQEDESLVDLVISAQQTRNEAIARFESLRAEQKAFGKQVAQASGEEKDRL 70
Query: 56 ---FKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNEDENGIVRTKGD--- 106
K+L +V + + E +L N +H VP + ED+ ++RT+G
Sbjct: 71 LAEVKDLSQRVKTAEAASNEAEETFRSLQRRVPNPIHEGVP-AGGEDDFDVLRTEGSPRD 129
Query: 107 --TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKG 164
E H++L + VD E GA +G R YFL+G L++ ++Q + + + G
Sbjct: 130 FAAEGFTPKDHLELAESLGAVDMERGAKTSGARFYFLQGVGARLELAMMQMGMDQALAAG 189
Query: 165 YTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQP 224
+TP+ TP +R E MQ + D+E+Y++ E DD YL TSE
Sbjct: 190 FTPMITPTLVRPETMQGTGFDVEHDDEIYRL---------------ERDDLYLTGTSEVA 234
Query: 225 ICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS-------------------------- 258
I H D L +S P R G STC+R+E +
Sbjct: 235 IAGYHADEILDLSSGPSRIAGWSTCYRREAGSHGKDTRGILRVHQFNKLEMFVYCSAEDS 294
Query: 259 -------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSN 299
+ YRVV+I +G L +AA+K D E W P +REL S S+
Sbjct: 295 AAEHERLLAWEEQMLAKMELPYRVVDIAAGDLGMSAARKFDCEGWVPSQETYRELTSTSD 354
Query: 300 CLDYQSRRLLVRYGQTKKMNEK--IEFVHMLNATACATTRVICAILETHQTETG-VRIPD 356
C +Q+RRL +R +T K V LN T ATTR + AILE HQ G VR+P+
Sbjct: 355 CTTFQARRLNIRERRTADDGAKAGTRPVATLNGT-LATTRWLVAILENHQQADGSVRVPE 413
Query: 357 CLRKFVPAVYVNE 369
LR ++ V E
Sbjct: 414 ALRPYLGGQEVFE 426
>gi|354614974|ref|ZP_09032793.1| Seryl-tRNA synthetase [Saccharomonospora paurometabolica YIM 90007]
gi|353220680|gb|EHB85099.1| Seryl-tRNA synthetase [Saccharomonospora paurometabolica YIM 90007]
Length = 420
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 194/435 (44%), Gaps = 98/435 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + R E P+ VR +Q+ R ++ +VD+++ D + R ADN +
Sbjct: 1 MIDLRILREE----PDVVRASQRARGEDDGVVDRLLALDAERRSAIATADNLRAEQKQLG 56
Query: 62 KVIGE------------------KMKAKEPVGDSSTLPGNHLHPSVP-------VSNNED 96
K IG+ ++K E + + + LH SVP + ED
Sbjct: 57 KQIGKASGDEREELLARGKELAARVKDAEAEQNRAGAEFDELHRSVPNVVHPEVPAGGED 116
Query: 97 ENGIVRTKGDTEVRKKYSHVDLITMIDG---VDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
+ +++ G T + D + + +G +D E GA V+G R YFL G LQ+ L+
Sbjct: 117 DYTVLKHVG-TPAEFDFEPADHLALAEGLGALDMERGAKVSGARFYFLTGIGAQLQLALL 175
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
A ++ EKG+T + P +R EVM L + D E+Y++ D
Sbjct: 176 NLAAAQATEKGFTLMIPPVLVRPEVMSGTGFLGEHDSEVYRLAE---------------D 220
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------- 254
D YL+ TSE P+ H D L + P RY G S+CFR+E
Sbjct: 221 DLYLVGTSEVPLAGYHSDEILDLSGGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKV 280
Query: 255 -------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 288
L K + YRV++ +G L +AA+K D EAW P
Sbjct: 281 EMFVFSRPEDAEAEHANLLSWEEEMLAKIEVPYRVIDTAAGDLGTSAARKYDCEAWVPTQ 340
Query: 289 GAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQT 348
A+REL S SNC +Q+RRL VR+ + + + + LN T ATTR I AILE HQ
Sbjct: 341 RAYRELTSTSNCTTFQARRLAVRH---RDADGRTQTAATLNGT-LATTRWIVAILENHQQ 396
Query: 349 ETG-VRIPDCLRKFV 362
G VR+P+ LR F+
Sbjct: 397 PDGSVRVPEALRPFL 411
>gi|224534318|ref|ZP_03674896.1| serine--tRNA ligase [Borrelia spielmanii A14S]
gi|224514420|gb|EEF84736.1| serine--tRNA ligase [Borrelia spielmanii A14S]
Length = 425
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 161/340 (47%), Gaps = 77/340 (22%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N L P VP+ N+E++N ++ G V K+ H++L +D +D + V+G +
Sbjct: 104 NILSPDVPIGNSEEDNFEIKKVG---VVSKFDFKPKDHLELGRDLDLLDFDRAREVSGSK 160
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEE-LYKVI 196
Y+LK AV L++ L+ ++L+K EKG+ TP R+ ++ + + DE +YK+
Sbjct: 161 FYYLKNEAVFLEIALINFSLNKLREKGFNVFITPDVAREFIVDGIGFNPRGDESNIYKI- 219
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--- 253
E DKYL+ TSE + + + + S PI+ G S CFR+E
Sbjct: 220 --------------EDTDKYLVGTSEITLGGYYYNKIIDLTS-PIKMAGFSHCFRKEAGA 264
Query: 254 --DLTKS----------------------------------------IAYRVVNIVSGAL 271
L+K I YRV+NI S L
Sbjct: 265 YGQLSKGLYRVHQFSKVEMFCFCKAEESSVIHDEFLSIQEQIFTELEIPYRVLNICSFDL 324
Query: 272 NHAAAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
A KK D+EAW PG GA+ E+ S SNC DYQSRRL +RY N +F HM+
Sbjct: 325 GSPAYKKYDIEAWMPGRDGKGAYGEITSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMV 381
Query: 329 NATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
N TA ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 382 NGTAIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDYI 421
>gi|225181881|ref|ZP_03735316.1| seryl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225167395|gb|EEG76211.1| seryl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 426
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 153/336 (45%), Gaps = 67/336 (19%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGD--TEVRKKYSHVDLITMIDGVDSEAGAIVAGG 136
TLP N H VPV E+EN VR G+ T + H D+ +D +D E V G
Sbjct: 102 TLP-NIPHKDVPVGQTEEENVAVRHFGEPTTFDFEAKPHWDIAANLDIIDFERAGKVTGT 160
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV 195
R F KG L+ L+ + L I E GYT ++ PF + +E M QL +F+E+ ++V
Sbjct: 161 RFAFYKGQGAQLERALINFMLDLHITEHGYTEIFPPFMVHRESMVGTGQLPKFEEDAFRV 220
Query: 196 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-- 253
D+ D +LI T+E P+ +HR+ E LP Y+ S CFR E
Sbjct: 221 -------ADT--------DYFLIPTAEVPVTNLHREEIFTEEDLPKHYVAYSACFRAEAG 265
Query: 254 ------------------DLTK-------------------------SIAYRVVNIVSGA 270
+L K + Y+ + + +
Sbjct: 266 AHGRDTRGLIRQHQFNKVELVKFARPQDSMQELETLTANAEEILKRLGLPYQTMLMCTAD 325
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
L AAAKK DLE W P +RE+ SCSN D+Q+RR +R+ + K EFVH LN
Sbjct: 326 LGFAAAKKYDLEVWLPAYNTYREISSCSNFGDFQARRAGIRFRPAQ--GGKAEFVHTLNG 383
Query: 331 TACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
+ A R + AILE +Q E G V IP+ LR ++P +
Sbjct: 384 SGVAVGRTVAAILENYQQEDGTVLIPEPLRPYMPGL 419
>gi|381399804|ref|ZP_09924822.1| Seryl-tRNA synthetase [Microbacterium laevaniformans OR221]
gi|380772867|gb|EIC06553.1| Seryl-tRNA synthetase [Microbacterium laevaniformans OR221]
Length = 426
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 190/444 (42%), Gaps = 97/444 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ V+++Q+ R ++ + VD+ IE D R + +N
Sbjct: 1 MIDLALLRD----NPDLVKRSQQARGESPDTVDEAIEADRARRAAITAFEELRAAQNAHG 56
Query: 62 KVIGEKMKAKEP--VGDSSTLPG------------------------NHLHPSVPVSNNE 95
K + K +P V + L N + VP + E
Sbjct: 57 KTVAAAPKEDKPALVAQAKELSDRVKAAQQAVTAAEEAADAALARIENIVIDGVP-AGGE 115
Query: 96 DENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLV 153
+ VRT G + H+ L + +D E G V+G R YFL G L+ L+
Sbjct: 116 ENFVTVRTHGQPASFDFEPLDHLALGEKLGAIDMERGTKVSGSRFYFLTGIGARLEYALM 175
Query: 154 QYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD 213
AL + ++ G+ P+ P +R EVM+ L Q +E+YK+ E D
Sbjct: 176 SLALQRAVDAGFIPMIPPTLVRPEVMRGTGFLGQHADEVYKL---------------EAD 220
Query: 214 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR---------------------- 251
D YL+ TSE P+ H L + RY G STC+R
Sbjct: 221 DLYLVGTSEVPLAGYHMGEILDLTAGAKRYAGWSTCYRREAGSYGKDTRGIIRVHQFNKL 280
Query: 252 ---------------------QEDLTK--SIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 288
QE + + ++YRV+++ +G L +AA+K D+EAW P
Sbjct: 281 EMFVYTTPEDAETEHLRLVALQEQMLQDLGLSYRVIDVAAGDLGSSAARKYDVEAWVPTQ 340
Query: 289 GAFRELVSCSNCLDYQSRRLLVRYGQTKKMN--EKIEFVHMLNATACATTRVICAILETH 346
GA+REL S SNC YQ+RRL VR+ + K V LN T ATTR I A+LETH
Sbjct: 341 GAYRELTSTSNCTTYQARRLDVRHRPAVEGGGAGKTAPVATLNGT-LATTRWIVALLETH 399
Query: 347 QTETG-VRIPDCLRKFVPAVYVNE 369
Q G V IP+ LR ++ + V E
Sbjct: 400 QRADGSVVIPEVLRPYLGGLEVAE 423
>gi|407936588|ref|YP_006852230.1| seryl-tRNA ligase [Propionibacterium acnes C1]
gi|407905169|gb|AFU41999.1| seryl-tRNA ligase [Propionibacterium acnes C1]
Length = 424
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 190/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
++D L RT DP+ VR++Q R ++ +VD V+ D R+
Sbjct: 1 MIDPKLLRT----DPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ ++ K + +V K A E + L GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E + H+++ + +D E G ++G R Y L G L+
Sbjct: 116 DEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 --DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 254 --------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D + I ++V+++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +RY + + +E + LN T CA TR+I +LE
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRY----RGPDGVEPLATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VRIP+ LR ++
Sbjct: 397 HQQADGSVRIPEALRPYL 414
>gi|220932938|ref|YP_002509846.1| seryl-tRNA synthetase [Halothermothrix orenii H 168]
gi|254783031|sp|B8CZZ9.1|SYS_HALOH RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|219994248|gb|ACL70851.1| seryl-tRNA synthetase [Halothermothrix orenii H 168]
Length = 422
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 178/409 (43%), Gaps = 99/409 (24%)
Query: 33 VDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPVGD--------SSTLPG-- 82
+D+ E D K R+ + + +N+ S IGE +A E D S+T+
Sbjct: 27 LDEFKELDEKRREIIQEVEQLKHKRNVVSSKIGELKRAGEDASDIIAEMKEVSATIKKYD 86
Query: 83 ------------------NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLI 119
N H SVPV +ED+N VR G+ +K+ H DL
Sbjct: 87 EELRGIEERLQQVVLSIPNMPHDSVPVGEDEDDNVEVRRWGEP---RKFDFEFKPHWDLG 143
Query: 120 TMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVM 179
+D +D E G+ V+G R FLKG L+ L+ + + + GYT ++ PF + +
Sbjct: 144 EALDILDFERGSKVSGARFTFLKGAGARLERSLISFMIDHHTQNGYTEIFPPFMVNSDSC 203
Query: 180 QEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASL 239
QL +F +++KV G D YLI T+E P+ ++RD L L
Sbjct: 204 IGTGQLPKFAGDMFKVEGT---------------DYYLIPTAEVPVTNLYRDEILNAEDL 248
Query: 240 PIRYLGVSTCFRQ------------------------------------EDLTKS----- 258
P+ ++ S CFR E LT++
Sbjct: 249 PVYHVAYSACFRAEAGAHGRDTRGIIRQHQFNKVELVKFVHPDKSFEELEKLTRNAEEIL 308
Query: 259 ----IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ 314
+ YRVV + +G L ++AK D+E W P +RE+ SCSN D+Q+RR +R+
Sbjct: 309 QMLELPYRVVTLCTGDLTFSSAKTYDIEVWMPAYDTYREISSCSNFKDFQARRAGIRF-- 366
Query: 315 TKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+ K E+VH LN + A R + AI+E +Q E G + +P+ LR ++
Sbjct: 367 RPEPGAKAEYVHTLNGSGLAIGRTVAAIMENYQNEDGSITVPEVLRPYM 415
>gi|237784844|ref|YP_002905549.1| seryl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
gi|259511663|sp|C4LGQ1.1|SYS_CORK4 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|237757756|gb|ACR17006.1| Seryl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
Length = 423
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 192/439 (43%), Gaps = 103/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL R DP++VR++Q+ R ++ LVD++++ D R+ AD +
Sbjct: 1 MIDLKQLRD----DPDRVRESQRTRGEDPGLVDQLLQADQARREAISAADATRAEHKAYT 56
Query: 62 KVIGEKMKAKEP-------------------------VGDSST----LPGNHLHPSVPVS 92
K +G+KM+ P V ++S + +++ P
Sbjct: 57 KSMGKKMRDASPEEKENLRAKGTELSNVVKEKEEAQRVAEASVHDLQMQISNIVEGAPAG 116
Query: 93 NNEDENGIVRTKGDTEVRKKY---SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
ED +V K T + + H++L + +D E GA V+G R YFLKG LQ
Sbjct: 117 GEED--FVVVEKVGTPPQFDFEPKDHLELGESLGIIDMERGAKVSGSRFYFLKGAGALLQ 174
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+G++Q A K ++ G+ + TP + E M L Q +E+Y +
Sbjct: 175 LGMLQLAAQKAVQHGFELMITPVIVNPESMSGTGFLGQHADEIYYL-------------- 220
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------- 258
+ D++YL+ TSE + H + ++ P RY G S+CFR+E +
Sbjct: 221 -QEDNQYLVGTSEVALAGYHSKEIIDLSAGPKRYAGWSSCFRREAGSYGKDTRGILRVHQ 279
Query: 259 ----------------------------------IAYRVVNIVSGALNHAAAKKLDLEAW 284
+ YR++++ G L +AA+K D EAW
Sbjct: 280 FDKVEMFSYCKPEDAAAEHQKLLSMEREMLAAVEVPYRIIDVAGGDLGSSAARKFDTEAW 339
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P +REL S SNC +Q+RRL +RY + N K + LN T ATTR + AILE
Sbjct: 340 VPTQNTYRELTSTSNCTTFQARRLGIRY---RDENNKTQIAATLNGT-LATTRWLVAILE 395
Query: 345 THQTETG-VRIPDCLRKFV 362
+Q G V++P+ L+ +V
Sbjct: 396 NNQQADGSVKVPEALQPYV 414
>gi|150020158|ref|YP_001305512.1| seryl-tRNA synthetase [Thermosipho melanesiensis BI429]
gi|166223305|sp|A6LJM6.1|SYS_THEM4 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|149792679|gb|ABR30127.1| seryl-tRNA synthetase [Thermosipho melanesiensis BI429]
Length = 425
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 193/439 (43%), Gaps = 107/439 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D+ L R E PE + R + E++D+++ D +WR + +N +N S
Sbjct: 1 MIDIKLLRKE----PEIFYNALEKRAMDKEIIDRILVLDREWRSILAEVNNLKAKRNELS 56
Query: 62 KV----------------------IGEKMKA--------KEPVGDSSTLPGNHLHPSVPV 91
K+ IGEK+K +E + + + N H SVPV
Sbjct: 57 KMVAKLKAEKKDIEAEELIKESKGIGEKIKKLDERQKRLEEEMKNLALEIPNIPHESVPV 116
Query: 92 SNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
+E EN VR G D E + +H DL + +D E A ++G R + G
Sbjct: 117 GKDETENVEVRKWGTPRKFDFEPK---AHWDLGPELGLIDFERAAKLSGARFTVMYGLLA 173
Query: 147 CLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
L+ L+Q+ L E GYT ++ P +R+EVM +L +F++E Y
Sbjct: 174 KLERALIQFMLDVHTKEHGYTEVWVPHLVRREVMIWTGKLPKFEDESYNT---------- 223
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------- 252
+ DD +LI T+E PI A+H + L E LP +Y+ ++C+R+
Sbjct: 224 -----KKDDLFLIPTAEVPITALHAEEILKEKELPKKYVSYTSCYRREAGSYGKDVRGMI 278
Query: 253 -----------------------EDLTK---------SIAYRVVNIVSGALNHAAAKKLD 280
E LT+ + YRVVN+ +G L A+AK D
Sbjct: 279 RQHQFDKVELVWFTKEEESFNALEQLTRDAERILQLLELPYRVVNLCTGDLGFASAKTYD 338
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
+E W P ++E+ SCSN D+Q+RR ++Y + + K FVH LN + A R +
Sbjct: 339 IEVWLPSYNDYKEVSSCSNITDFQARRANIKY---RGSDNKTHFVHTLNGSGLAIGRTLV 395
Query: 341 AILETHQTETG-VRIPDCL 358
AI+E +Q E G + IP L
Sbjct: 396 AIMENYQNEDGTITIPKVL 414
>gi|423484477|ref|ZP_17461166.1| seryl-tRNA synthetase [Bacillus cereus BAG6X1-2]
gi|401138317|gb|EJQ45888.1| seryl-tRNA synthetase [Bacillus cereus BAG6X1-2]
Length = 424
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 150/326 (46%), Gaps = 66/326 (20%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
H S P+ ED+N + RT G+ + + H DL T + +D E V G R F KG
Sbjct: 109 HESAPIGETEDDNVVARTWGEVKEFTYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKG 168
Query: 144 PAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 169 AGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI------- 221
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 --------ESEDYFLIPTAEVPVTNMHRDEILSKEQLPIRYAAFSSCFRSEAGSAGRDTR 273
Query: 254 -----------DLTK-------------------------SIAYRVVNIVSGALNHAAAK 277
+L K + YRV+++ +G L AAK
Sbjct: 274 GLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAK 333
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A R
Sbjct: 334 KYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLAIGR 391
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
+ AILE +Q E G + IP+ LR ++
Sbjct: 392 TVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|304315564|ref|YP_003850709.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302777066|gb|ADL67625.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 423
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 157/335 (46%), Gaps = 71/335 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRK----KYSHVDLITMIDGVDSEAGAIVA 134
T+P N H SVPV +++ +N +R GD VRK H D+ + +D EA + V
Sbjct: 102 TIP-NIPHESVPVGDSDADNVEIRRWGD--VRKFDFEIKPHWDIGVELGILDFEAASRVT 158
Query: 135 GGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELY 193
G R F KG L+ L+ + + EK GYT ++ PF + + M QL +F+E+ +
Sbjct: 159 GSRFTFYKGLGCRLERSLISFMMDLHTEKHGYTEVFPPFMVHRRSMYGTGQLPKFEEDAF 218
Query: 194 KVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
KV G D +LI T+E P+ ++R++ + LPI S CFRQE
Sbjct: 219 KVAGT---------------DYFLIPTAEVPVTNMYRETIIDAEELPIYNCAYSACFRQE 263
Query: 254 -------------------------------------------DLTKS--IAYRVVNIVS 268
D+ K+ I YRVV+I +
Sbjct: 264 AGSAGRDTRGLIRQHQFNKVELVKITEPERSYEELEKMVNDAEDVLKTLGIPYRVVSICT 323
Query: 269 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
G L AAKK DLE W P G + E+ SCSNC D+Q+RR ++Y K K ++VH L
Sbjct: 324 GDLGFTAAKKYDLEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKGGGKAQYVHTL 381
Query: 329 NATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
N + A R AILE +Q E G V IP+ LR ++
Sbjct: 382 NGSGVAVGRTFAAILENYQQEDGSVVIPEALRPYM 416
>gi|222528873|ref|YP_002572755.1| seryl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|254783001|sp|B9MQM8.1|SYS_ANATD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|222455720|gb|ACM59982.1| seryl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 420
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 172/370 (46%), Gaps = 81/370 (21%)
Query: 50 ADNFNKFKNLCSKVIGEKMKAKEPVGDSS-----TLPGNHLHPSVPVSNNEDENGIVRTK 104
D N+ K+L K+ K KE V D T+P N H SVPV ++ EN VR
Sbjct: 69 TDLMNELKDLSDKIKELDSKVKE-VEDEIEKILLTIP-NIPHESVPVGKDDTENVEVRRW 126
Query: 105 G-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSK 159
G D E++ H ++ + +D E + V+G R F +G L+ L+ + L
Sbjct: 127 GEVREPDFEIK---PHWEIGVNLGILDFERASKVSGSRFTFYRGLGARLERALINFMLDL 183
Query: 160 WIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLI 218
IEK GYT L+ PF + ++ M QL +F+E+ +K DD +LI
Sbjct: 184 HIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTT----------------DDYFLI 227
Query: 219 ATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR--------------------------- 251
T+E P+ HR+ L E LPI+Y+ S CFR
Sbjct: 228 PTAEVPVTNYHREEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKF 287
Query: 252 ----------------QEDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRE 293
ED+ K + YRVV + SG L ++AK D+E W P G + E
Sbjct: 288 TKPEDSYDELEKLTADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVE 347
Query: 294 LVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-V 352
+ SCSN +YQ+RR +R+ ++ + K+++VH LN + A R + AILE Q + G V
Sbjct: 348 ISSCSNFENYQARRANIRF---RRKDGKLDYVHTLNGSGLAVGRTLAAILENFQQKDGTV 404
Query: 353 RIPDCLRKFV 362
+P+ LRK++
Sbjct: 405 VVPEVLRKYM 414
>gi|423461720|ref|ZP_17438516.1| seryl-tRNA synthetase [Bacillus cereus BAG5X2-1]
gi|401135278|gb|EJQ42880.1| seryl-tRNA synthetase [Bacillus cereus BAG5X2-1]
Length = 424
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 150/326 (46%), Gaps = 66/326 (20%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
H S PV ED+N + RT G+ + + H DL T + +D E V G R F KG
Sbjct: 109 HESAPVGETEDDNVVARTWGEVKEFAYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKG 168
Query: 144 PAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 169 AGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI------- 221
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 --------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTR 273
Query: 254 -----------DLTK-------------------------SIAYRVVNIVSGALNHAAAK 277
+L K + YRV+++ +G L AAK
Sbjct: 274 GLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAK 333
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A R
Sbjct: 334 KYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLAIGR 391
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
+ AILE +Q E G + IP+ LR ++
Sbjct: 392 TVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|229170865|ref|ZP_04298470.1| Seryl-tRNA synthetase [Bacillus cereus MM3]
gi|228612600|gb|EEK69817.1| Seryl-tRNA synthetase [Bacillus cereus MM3]
Length = 424
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 150/326 (46%), Gaps = 66/326 (20%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
H S PV ED+N + RT G+ + + H DL T + +D E V G R F KG
Sbjct: 109 HESAPVGETEDDNVVARTWGEVKEFAYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKG 168
Query: 144 PAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 169 AGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI------- 221
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 --------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTR 273
Query: 254 -----------DLTK-------------------------SIAYRVVNIVSGALNHAAAK 277
+L K + YRV+++ +G L AAK
Sbjct: 274 GLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAK 333
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A R
Sbjct: 334 KYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLAIGR 391
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
+ AILE +Q E G + IP+ LR ++
Sbjct: 392 TVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|30018290|ref|NP_829921.1| seryl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|218233674|ref|YP_002364867.1| seryl-tRNA synthetase [Bacillus cereus B4264]
gi|228918967|ref|ZP_04082348.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228956457|ref|ZP_04118255.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229039921|ref|ZP_04189687.1| Seryl-tRNA synthetase [Bacillus cereus AH676]
gi|229107702|ref|ZP_04237340.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-15]
gi|229125533|ref|ZP_04254567.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
gi|229142822|ref|ZP_04271266.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST24]
gi|229148425|ref|ZP_04276683.1| Seryl-tRNA synthetase [Bacillus cereus m1550]
gi|296500850|ref|YP_003662550.1| seryl-tRNA synthetase [Bacillus thuringiensis BMB171]
gi|423583670|ref|ZP_17559781.1| seryl-tRNA synthetase [Bacillus cereus VD014]
gi|423589316|ref|ZP_17565402.1| seryl-tRNA synthetase [Bacillus cereus VD045]
gi|423632815|ref|ZP_17608560.1| seryl-tRNA synthetase [Bacillus cereus VD154]
gi|423633652|ref|ZP_17609305.1| seryl-tRNA synthetase [Bacillus cereus VD156]
gi|423644658|ref|ZP_17620275.1| seryl-tRNA synthetase [Bacillus cereus VD166]
gi|423651338|ref|ZP_17626908.1| seryl-tRNA synthetase [Bacillus cereus VD169]
gi|423658412|ref|ZP_17633711.1| seryl-tRNA synthetase [Bacillus cereus VD200]
gi|46577219|sp|Q81JC4.1|SYS_BACCR RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|226701388|sp|B7HII5.1|SYS_BACC4 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|29893830|gb|AAP07122.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|218161631|gb|ACK61623.1| serine--tRNA ligase [Bacillus cereus B4264]
gi|228635034|gb|EEK91605.1| Seryl-tRNA synthetase [Bacillus cereus m1550]
gi|228640636|gb|EEK97022.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST24]
gi|228657917|gb|EEL13721.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
gi|228675742|gb|EEL30948.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-15]
gi|228727411|gb|EEL78602.1| Seryl-tRNA synthetase [Bacillus cereus AH676]
gi|228803214|gb|EEM50034.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228840682|gb|EEM85942.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|296321902|gb|ADH04830.1| seryl-tRNA synthetase [Bacillus thuringiensis BMB171]
gi|401208466|gb|EJR15230.1| seryl-tRNA synthetase [Bacillus cereus VD014]
gi|401224324|gb|EJR30880.1| seryl-tRNA synthetase [Bacillus cereus VD045]
gi|401258928|gb|EJR65107.1| seryl-tRNA synthetase [Bacillus cereus VD154]
gi|401269883|gb|EJR75909.1| seryl-tRNA synthetase [Bacillus cereus VD166]
gi|401278457|gb|EJR84389.1| seryl-tRNA synthetase [Bacillus cereus VD169]
gi|401282719|gb|EJR88617.1| seryl-tRNA synthetase [Bacillus cereus VD156]
gi|401287831|gb|EJR93599.1| seryl-tRNA synthetase [Bacillus cereus VD200]
Length = 424
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 150/326 (46%), Gaps = 66/326 (20%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
H S PV ED+N + RT G+ + + H DL T + +D E V G R F KG
Sbjct: 109 HESAPVGETEDDNVVARTWGEVKEFTYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKG 168
Query: 144 PAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 169 AGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI------- 221
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 --------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTR 273
Query: 254 -----------DLTK-------------------------SIAYRVVNIVSGALNHAAAK 277
+L K + YRV+++ +G L AAK
Sbjct: 274 GLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAK 333
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A R
Sbjct: 334 KYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLAIGR 391
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
+ AILE +Q E G + IP+ LR ++
Sbjct: 392 TVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|443493409|ref|YP_007371556.1| seryl-tRNA synthetase SerS [Mycobacterium liflandii 128FXT]
gi|442585906|gb|AGC65049.1| seryl-tRNA synthetase SerS [Mycobacterium liflandii 128FXT]
Length = 419
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 187/433 (43%), Gaps = 95/433 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP+ VR++Q R ++ LVD ++ D R AD+ + S
Sbjct: 1 MIDLKLLRE----DPDVVRRSQLSRCEDPALVDALLTADTARRTAISTADSLRAEQKAAS 56
Query: 62 KVIG------------------EKMKAKEPVGDSSTLPGNHLHPSVP-------VSNNED 96
K +G E++KA E + H ++P + ED
Sbjct: 57 KSVGGASPEERPALLQRAKDLAEQVKAAEATQSETETAFTAAHMAIPNVILGGVPAGGED 116
Query: 97 ENGIVRTKGDTE-VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
+ ++ G+ + H++L + +D GA VAG R YFL G LQ+GL+Q
Sbjct: 117 DYAVLDMVGEPRALDNPKDHLELGESLGLIDMARGAKVAGSRFYFLTGQGALLQLGLLQL 176
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
AL ++ G+ P+ P +R EVM L +E+Y++ E DD
Sbjct: 177 ALRLAVDNGFIPMIPPVLVRPEVMAGTGFLGAHADEVYRL---------------EADDL 221
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------------- 258
YL+ TSE P+ H D + + P+RY G S+CFR+E +
Sbjct: 222 YLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEG 281
Query: 259 ----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
+ YRV+++ +G L +AA+K D EAW P G
Sbjct: 282 FVYCAPADAEAEHQRLLAWQREMLAQIEVPYRVIDVAAGDLGASAARKFDCEAWIPTQGT 341
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL RY + N K + LN T TTR + +ILE HQ
Sbjct: 342 YRELTSTSNCTTFQARRLATRY---RDANGKPQIAATLNGT-LGTTRWLVSILENHQQPD 397
Query: 351 G-VRIPDCLRKFV 362
G VR+P L FV
Sbjct: 398 GSVRVPAALVGFV 410
>gi|296329009|ref|ZP_06871516.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|296153902|gb|EFG94713.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 421
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 191/441 (43%), Gaps = 112/441 (25%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAK----- 71
E +++ K+R NV++ D +E D K R+ + +N + +N S I K K
Sbjct: 12 EMLKEMLKNRNSNVDM-DAFVELDSKRREVLSEVENLKRERNNASAEIANLKKEKKNADH 70
Query: 72 --EPVGDSST----------------------LPGNHLHPSVPVSNNEDENGIVRTKG-- 105
E +G+ ST +P N HPS P+ +ED N +R G
Sbjct: 71 IIEKMGEVSTKIKDLDAELVEIDEKIKDIQLNIP-NVYHPSTPIGPDEDYNLEIRKWGIP 129
Query: 106 ---DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS-KWI 161
D E + SH D+ + +D E GA ++G R +G A L+ ++ + L +
Sbjct: 130 KKCDFEPK---SHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERAIINFMLDVHTL 186
Query: 162 EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
E+GYT TPF ++ EV + QL +F+E++YK DD YLI+TS
Sbjct: 187 EEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTT----------------DDMYLISTS 230
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------------- 253
E + +HR L +A LP Y S CFR+E
Sbjct: 231 EITMTNIHRKEILEQAELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDA 290
Query: 254 -----DLTK------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVS 296
+L K + YRV+ + SG L +AAK DLE W P +RE+ S
Sbjct: 291 ESSYDELEKMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISS 350
Query: 297 CSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPD 356
CSNC +Q+RR+ ++Y ++ EF H LN + A R + AI+E +Q E G +
Sbjct: 351 CSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFL-- 404
Query: 357 CLRKFVPAVYVNEAGEIPFVK 377
VP V + G + +K
Sbjct: 405 -----VPKVLIPYMGGVDVIK 420
>gi|219684738|ref|ZP_03539681.1| seryl-tRNA synthetase [Borrelia garinii PBr]
gi|219672100|gb|EED29154.1| seryl-tRNA synthetase [Borrelia garinii PBr]
Length = 425
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 163/340 (47%), Gaps = 77/340 (22%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N L P VP+ N+E++N ++ G V K+ H++L +D +D + V+G +
Sbjct: 104 NILSPDVPIGNSEEDNFEIKKVG---VVPKFDFKPKDHLELGRDLDLLDFDRAREVSGSK 160
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEE-LYKVI 196
Y+LK AV L++ L+ ++L+K EKG+ TP R+ ++ + + DE +YK+
Sbjct: 161 FYYLKNEAVFLEIALINFSLNKLREKGFDVFITPDIAREFIVDGIGFNPRGDESNIYKI- 219
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--- 253
E DKYL+ TSE + + + + + +LPI+ G S CFR+E
Sbjct: 220 --------------ESTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAGA 264
Query: 254 --DLTKS----------------------------------------IAYRVVNIVSGAL 271
L+K I YRV+NI S L
Sbjct: 265 YGQLSKGLYRVHQFSKVEMFCFCKAEESQVIHDEFLSIQEQIFTELEIPYRVLNICSFDL 324
Query: 272 NHAAAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
A KK D+EAW PG G++ E+ S SNC DYQSRRL +RY N +F HM+
Sbjct: 325 GSPAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMV 381
Query: 329 NATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
N TA ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 382 NGTAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|167036460|ref|YP_001664038.1| seryl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167038703|ref|YP_001661688.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|300913738|ref|ZP_07131055.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307723246|ref|YP_003902997.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|320114885|ref|YP_004185044.1| seryl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|238687557|sp|B0K0Z5.1|SYS_THEPX RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|238687674|sp|B0KAI8.1|SYS_THEP3 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166852943|gb|ABY91352.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|166855294|gb|ABY93702.1| seryl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|300890423|gb|EFK85568.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307580307|gb|ADN53706.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|319927976|gb|ADV78661.1| seryl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 423
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 159/336 (47%), Gaps = 73/336 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIV 133
T+P N H SVP+ +++++N +R G+ +K+ H ++ +D +D EA A V
Sbjct: 102 TIP-NIPHESVPIGDSDEDNVEIRRWGEP---RKFDFEPKPHWEIGQELDILDFEAAARV 157
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
G R F KG L+ L+ + L IEK GYT ++ PF + + M QL +F+E+
Sbjct: 158 TGSRFTFYKGLGARLERALINFMLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDA 217
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
+KV G D +LI T+E P+ ++RD+ + LPI + S CFRQ
Sbjct: 218 FKVYGT---------------DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQ 262
Query: 253 E--------------------DLTK-------------------------SIAYRVVNIV 267
E +L K + YRVV I
Sbjct: 263 EAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVVIC 322
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G L A+KK D+E W P G + E+ SCSNC D+Q+RR ++Y K K ++VH
Sbjct: 323 TGDLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHT 380
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R AILE +Q E G V IP+ LR ++
Sbjct: 381 LNGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|312865429|ref|ZP_07725656.1| serine--tRNA ligase [Streptococcus downei F0415]
gi|311098947|gb|EFQ57164.1| serine--tRNA ligase [Streptococcus downei F0415]
Length = 425
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 190/444 (42%), Gaps = 99/444 (22%)
Query: 5 LDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI 64
LDL R + D +V KN +R E +D++ E D+K R K++ +N+ S I
Sbjct: 2 LDLKRIRQNFD--EVAKNLANRGVKAETLDQLKELDVKRRDLLVKSEELKAHRNVASTAI 59
Query: 65 GEKMKAKEPVGDS-----------------------------STLPGNHLHPSVPVSNNE 95
+ + KE D TLP N H VPV +E
Sbjct: 60 AQAKRNKEDASDQIAQMQKVSAEIKSLDSQLAEVDQKLNDIVVTLP-NMPHADVPVGADE 118
Query: 96 DENGIVRTKG---DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
DEN VR G D + K +H DL +D +D E GA V G R F KG L+ +
Sbjct: 119 DENVEVRRWGTPRDFDFEAK-AHWDLGEDLDILDWERGAKVTGSRFLFYKGLGARLERAI 177
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+ L + ++GYT + P+ + + M Q +F E+ +++ DS
Sbjct: 178 YNFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFEL-------ADS------- 223
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------------- 253
D LI T+E P+ +R L +P+ + +S FR E
Sbjct: 224 -DYVLIPTAEVPLTNYYRGEILDGKEMPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHK 282
Query: 254 --------------DLTKSIA------------YRVVNIVSGALNHAAAKKLDLEAWFPG 287
+L K A YRV+ + +G + +AAK D+E W P
Sbjct: 283 VEMVKFAKPETSYEELEKMTANAENILQKLNLPYRVITLCTGDMGFSAAKTYDVEVWIPA 342
Query: 288 SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
+RE+ SCSNC D+Q+RR +RY + + K++ +H LN + A R + AILE +Q
Sbjct: 343 QNTYREISSCSNCEDFQARRAQIRY--RDEADGKVKLLHTLNGSGLAVGRTVAAILENYQ 400
Query: 348 TETG-VRIPDCLRKFVPAVYVNEA 370
E G V IP+ LR ++ V V +A
Sbjct: 401 NEDGSVTIPEVLRPYMGGVEVIKA 424
>gi|218895153|ref|YP_002443564.1| seryl-tRNA synthetase [Bacillus cereus G9842]
gi|228937319|ref|ZP_04099967.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228963114|ref|ZP_04124285.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228970205|ref|ZP_04130866.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228976775|ref|ZP_04137189.1| Seryl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|384184100|ref|YP_005569996.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402562891|ref|YP_006605615.1| seryl-tRNA ligase [Bacillus thuringiensis HD-771]
gi|410672389|ref|YP_006924760.1| serine--tRNA ligase SerS [Bacillus thuringiensis Bt407]
gi|423364761|ref|ZP_17342226.1| seryl-tRNA synthetase [Bacillus cereus VD022]
gi|423526686|ref|ZP_17503131.1| seryl-tRNA synthetase [Bacillus cereus HuB1-1]
gi|423566729|ref|ZP_17543000.1| seryl-tRNA synthetase [Bacillus cereus MSX-A1]
gi|452196393|ref|YP_007476474.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|226701387|sp|B7IS31.1|SYS_BACC2 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|218545743|gb|ACK98137.1| seryl-tRNA synthetase [Bacillus cereus G9842]
gi|228782937|gb|EEM31101.1| Seryl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228789506|gb|EEM37424.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228796570|gb|EEM44007.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228822344|gb|EEM68324.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326937809|gb|AEA13705.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401072575|gb|EJP81045.1| seryl-tRNA synthetase [Bacillus cereus VD022]
gi|401189222|gb|EJQ96278.1| seryl-tRNA synthetase [Bacillus cereus MSX-A1]
gi|401791543|gb|AFQ17582.1| seryl-tRNA ligase [Bacillus thuringiensis HD-771]
gi|402454904|gb|EJV86691.1| seryl-tRNA synthetase [Bacillus cereus HuB1-1]
gi|409171518|gb|AFV15823.1| serine--tRNA ligase SerS [Bacillus thuringiensis Bt407]
gi|452101786|gb|AGF98725.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 424
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|284042611|ref|YP_003392951.1| seryl-tRNA synthetase [Conexibacter woesei DSM 14684]
gi|283946832|gb|ADB49576.1| seryl-tRNA synthetase [Conexibacter woesei DSM 14684]
Length = 411
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 184/422 (43%), Gaps = 89/422 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFK-NVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
+LDL L R E P+ VR R + +D+++ D +WR+ + + +N
Sbjct: 1 MLDLRLIRRE----PDAVRAALARRGDVAADAIDRLLALDERWREQTVQLEEIQAEQNQL 56
Query: 61 SK------------VIGEKMKAKEPVGDSSTLPGNHLH------PSVPVSNNEDENGIVR 102
S+ + E + D+ T L P+ P+ + ++ +VR
Sbjct: 57 SRGRRGAPTPEEHAAMSELAARGRALSDAQTAVKRELDELLATLPNTPLDDAAPQDTVVR 116
Query: 103 TKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIE 162
T GD + H++L + +D E GA ++G R +L+G V L++ LV+YA+ K
Sbjct: 117 TVGDA-TKTGKDHLELAG--ERIDMERGARLSGSRFAYLRGDLVMLELALVRYAMEKLRG 173
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSE 222
+G+ P+ P +R++ + L ++++Y + PE DD YL TSE
Sbjct: 174 EGFEPVIPPVLVREQALFGTGMLPDTEQQIYHL-----------PE----DDLYLAGTSE 218
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------------------ 258
+ ++H+ L E LP RY G S CFR+E
Sbjct: 219 VALASLHQGEILAEEELPRRYAGFSPCFRREAGAAGRDTRGIFRVHQFDKVEMFAFVTPE 278
Query: 259 ---------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
I YRVVNI L +AAKK D EAW PG G +REL S
Sbjct: 279 QSAAEHERILGIEESILQELEIPYRVVNIAVDDLGASAAKKYDNEAWLPGQGRYRELTSA 338
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPD 356
SN D+Q+RRL +RY T +K +H LN TA A R I A+LE Q + G + +P
Sbjct: 339 SNTTDFQARRLDIRYRPTDA--KKPVTLHTLNGTAVAVGRTIIALLENGQQDDGSIALPR 396
Query: 357 CL 358
L
Sbjct: 397 VL 398
>gi|423386982|ref|ZP_17364237.1| seryl-tRNA synthetase [Bacillus cereus BAG1X1-2]
gi|401630431|gb|EJS48233.1| seryl-tRNA synthetase [Bacillus cereus BAG1X1-2]
Length = 424
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|302390825|ref|YP_003826645.1| seryl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
gi|302202902|gb|ADL11580.1| seryl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
Length = 426
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 160/337 (47%), Gaps = 69/337 (20%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAIVAG 135
T+P N H VPV ++E++N IV K + + H D+ +D +D E GA V+G
Sbjct: 102 TIP-NIPHEDVPVGDDEEDN-IVAWKWEEPTEFDFEPQPHWDIGEELDILDFERGAKVSG 159
Query: 136 GRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYK 194
R FLK L+ L+ + + E+ GY ++ PF +R E M QL +F+E+ +K
Sbjct: 160 SRFTFLKNLGARLERALIAFMIDIHTEEHGYNEVFPPFIVRGESMVGTGQLPKFEEDAFK 219
Query: 195 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE- 253
+ G + YLI T+E P+ ++RD + + LPI ++ S CFR E
Sbjct: 220 IEGT---------------NHYLIPTAEVPVTNMYRDEIMDKDELPIYHVAYSGCFRAEA 264
Query: 254 -------------------DLTK-------------------------SIAYRVVNIVSG 269
+L K + YRV+N+ +G
Sbjct: 265 GAHGRDTRGIIRQHQFNKVELVKFVEPGTSYDELEKLVKNAEKVLQRLELPYRVMNMCTG 324
Query: 270 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLN 329
L AAKK DLE WFP +RE+ SCSN D+Q+RR +RY + + K EFVH LN
Sbjct: 325 DLGFTAAKKYDLEVWFPSYDTYREVSSCSNFEDFQARRAGIRY--RPEPDAKAEFVHTLN 382
Query: 330 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
+ A R + AILE +Q E G V IP+ L+ ++ +
Sbjct: 383 GSGLAIGRTVAAILENYQQEDGSVIIPEALQPYMKGI 419
>gi|228898770|ref|ZP_04063054.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
gi|434378660|ref|YP_006613304.1| seryl-tRNA ligase [Bacillus thuringiensis HD-789]
gi|228860862|gb|EEN05238.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
gi|401877217|gb|AFQ29384.1| seryl-tRNA ligase [Bacillus thuringiensis HD-789]
Length = 424
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|400534954|ref|ZP_10798491.1| seryl-tRNA ligase [Mycobacterium colombiense CECT 3035]
gi|400331312|gb|EJO88808.1| seryl-tRNA ligase [Mycobacterium colombiense CECT 3035]
Length = 419
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 184/423 (43%), Gaps = 93/423 (21%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG--------- 65
DP+ VR++Q R ++ LVD ++ D R AD+ + SK +G
Sbjct: 10 DPDVVRRSQLSRGEDPSLVDALLTADAARRAAISSADSLRAEQKAASKSVGAASPEERPA 69
Query: 66 ---------EKMKAKEPVGDSSTLPGNHLHPS--------VPVSNNEDENGIVRTKGD-T 107
E++KA E + H + VP + ED+ ++ G+
Sbjct: 70 KLARAKDLAEQVKAAETAQADAEAAFTAAHMALSNVVIDGVP-AGGEDDFAVLDVVGEPA 128
Query: 108 EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTP 167
+ H++L + +D + GA V+G R YFL G LQ+GL+Q AL +E G+ P
Sbjct: 129 AIDNPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGKGALLQLGLLQLALRLAVENGFVP 188
Query: 168 LYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICA 227
+ P +R EVM L EE+Y+V E DD YL+ TSE P+
Sbjct: 189 MIPPVLVRPEVMAGTGFLGSHAEEIYRV---------------EADDLYLVGTSEVPLAG 233
Query: 228 VHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------------------------- 258
H D L + P+RY G S+CFR+E +
Sbjct: 234 YHSDEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCTPADAEAE 293
Query: 259 ----------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLD 302
+ YRV+++ +G L +AA+K D EAW P GA+REL S SNC
Sbjct: 294 HQRLLGWQREMLALIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQGAYRELTSTSNCTT 353
Query: 303 YQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
+Q+RRL RY + K + LN T TTR + AILE HQ G VR+P+ L F
Sbjct: 354 FQARRLATRY---RDGAGKPQTAATLNGT-LGTTRWLVAILENHQRPDGSVRVPEALVPF 409
Query: 362 VPA 364
V A
Sbjct: 410 VGA 412
>gi|3157938|gb|AAC17621.1| Similar to seryl-tRNA synthetase gb|U10400 from S cerevisiae. EST
gb|N96627 comes from this gene [Arabidopsis thaliana]
Length = 573
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 154/308 (50%), Gaps = 72/308 (23%)
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFM 174
H+ L +D +D ++ A V+G + ++LK AV L++ L+ + LS+ ++KGYTPL TP +
Sbjct: 233 HLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLLEMALLNWTLSQVMKKGYTPLTTPEIV 292
Query: 175 RKEVMQEVAQLAQFDE-ELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 233
R ++++ + D ++Y + G D+ LI T+E P+ +H DS
Sbjct: 293 RSSIVEKCGFQPRGDNTQVYSIDGT---------------DQCLIGTAEIPVGGIHMDSI 337
Query: 234 LPEASLPIRYLGVSTCFR------------------------------------------ 251
L E++LP++Y+ S CFR
Sbjct: 338 LLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMFVICQPEDSESFHQELIQ 397
Query: 252 -QEDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRL 308
+EDL S+ ++ +++ + L A +K D+EAW PG G F E+ S SNC DYQSRRL
Sbjct: 398 IEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMPGLGRFGEISSASNCTDYQSRRL 457
Query: 309 LVRYGQTK---------KMN-EKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDC 357
+RY ++ K N +FVH LNATACA R++ +LE +Q E G V IP+
Sbjct: 458 GIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVPRMMVCLLENYQQEDGSVVIPEP 517
Query: 358 LRKFVPAV 365
LR F+ +
Sbjct: 518 LRPFMGGI 525
>gi|229074077|ref|ZP_04207126.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-18]
gi|229094737|ref|ZP_04225745.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-29]
gi|229100803|ref|ZP_04231621.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-28]
gi|229113691|ref|ZP_04243128.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-3]
gi|407707968|ref|YP_006831553.1| FAD linked oxidase domain-containing protein [Bacillus
thuringiensis MC28]
gi|423376708|ref|ZP_17353992.1| seryl-tRNA synthetase [Bacillus cereus BAG1O-2]
gi|423439803|ref|ZP_17416709.1| seryl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|423450036|ref|ZP_17426915.1| seryl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|423462875|ref|ZP_17439643.1| seryl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|423532231|ref|ZP_17508649.1| seryl-tRNA synthetase [Bacillus cereus HuB2-9]
gi|423542499|ref|ZP_17518889.1| seryl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|423548730|ref|ZP_17525088.1| seryl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|423618800|ref|ZP_17594633.1| seryl-tRNA synthetase [Bacillus cereus VD115]
gi|423621463|ref|ZP_17597241.1| seryl-tRNA synthetase [Bacillus cereus VD148]
gi|228669757|gb|EEL25162.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-3]
gi|228682610|gb|EEL36669.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-28]
gi|228688675|gb|EEL42545.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-29]
gi|228709040|gb|EEL61164.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-18]
gi|401127186|gb|EJQ34914.1| seryl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|401168511|gb|EJQ75773.1| seryl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|401174328|gb|EJQ81538.1| seryl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401252492|gb|EJR58751.1| seryl-tRNA synthetase [Bacillus cereus VD115]
gi|401263390|gb|EJR69517.1| seryl-tRNA synthetase [Bacillus cereus VD148]
gi|401641131|gb|EJS58853.1| seryl-tRNA synthetase [Bacillus cereus BAG1O-2]
gi|402421603|gb|EJV53853.1| seryl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|402422872|gb|EJV55096.1| seryl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|402465240|gb|EJV96923.1| seryl-tRNA synthetase [Bacillus cereus HuB2-9]
gi|407385653|gb|AFU16154.1| Seryl-tRNA synthetase [Bacillus thuringiensis MC28]
Length = 424
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFAFEPKPHWDLATDLGVLDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|42779094|ref|NP_976341.1| seryl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|67461814|sp|Q73FJ3.1|SYS_BACC1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|42735009|gb|AAS38949.1| seryl-tRNA synthetase [Bacillus cereus ATCC 10987]
Length = 424
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLXNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|319790114|ref|YP_004151747.1| seryl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317114616|gb|ADU97106.1| seryl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 427
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 197/446 (44%), Gaps = 112/446 (25%)
Query: 2 VLDLDLFRTEKGGDPEKVRK--NQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
++D+ R E PEK ++ +++D +VD+++ D + R +A+N +N
Sbjct: 1 MIDIKALRRE----PEKFKELLSRRDPL-YASMVDELLAVDAERRALITEAENLKARRNK 55
Query: 60 CSKVIG---------EKMKAKEPVGDSS----------------------TLPGNHLHPS 88
SK IG E +K K V + S ++P N HPS
Sbjct: 56 LSKEIGKLFKEGRREEALKLKAEVEEISEKLVKVERELAEVEKKFNRLILSIP-NPPHPS 114
Query: 89 VPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
VPV +E++N +VR G+ + K+ H D+ +D +D E +AG R K
Sbjct: 115 VPVGEDENDNVVVRVWGE---KPKFDFTPVPHWDIAKSLDILDFERATKLAGSRFVVYKK 171
Query: 144 PAVCLQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
L+ L+ + L E GY + PF + + M QL +F+E+LYK+ G
Sbjct: 172 WGAKLERALINFMLDLHTTEHGYQEIIPPFLVNTKTMTGTGQLPKFEEDLYKIEG----- 226
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
+D +LI T+E P+ +H + LPE +LPI Y + CFR+E
Sbjct: 227 ----------EDLWLIPTAEVPLTNLHANEILPEKALPIYYTAYTPCFRKEAGAHGRDVR 276
Query: 254 -----------DLTK-------------------------SIAYRVVNIVSGALNHAAAK 277
+L K + YRVV + +G L +AAK
Sbjct: 277 GIMRLHQFNKVELVKIVHPETSYDELEKLVKEAEKVLQLLGLHYRVVELCTGDLGFSAAK 336
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
D+E W P +RE+ SCSNC D+Q+RR +R+ + K + VH LN + A R
Sbjct: 337 TYDIEVWIPSQERYREISSCSNCEDFQARRAKIRF---RDKEGKTQLVHTLNGSGLAVGR 393
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
+ AILE Q + G V++P+ L+ ++
Sbjct: 394 TVIAILEQFQQKDGSVKVPEVLQDYL 419
>gi|423410757|ref|ZP_17387877.1| seryl-tRNA synthetase [Bacillus cereus BAG3O-2]
gi|423433459|ref|ZP_17410463.1| seryl-tRNA synthetase [Bacillus cereus BAG4O-1]
gi|401109489|gb|EJQ17412.1| seryl-tRNA synthetase [Bacillus cereus BAG3O-2]
gi|401111696|gb|EJQ19580.1| seryl-tRNA synthetase [Bacillus cereus BAG4O-1]
Length = 424
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|361129811|gb|EHL01693.1| putative Seryl-tRNA synthetase, cytoplasmic [Glarea lozoyensis
74030]
Length = 251
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 121/252 (48%), Gaps = 88/252 (34%)
Query: 174 MRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 233
M KE M + AQL QFDEELYKVI D P+ +DKYLIATSEQPI A H D W
Sbjct: 1 MLKEYMAKTAQLEQFDEELYKVI-------DGEPQ----NDKYLIATSEQPISAFHADEW 49
Query: 234 LPEASLPIRYLGVSTCFRQE--------------------------DLTKS--------- 258
L LPIRY G S+C+R+E D KS
Sbjct: 50 LVAKDLPIRYAGFSSCYRREAGSAGKDAWGIFRVHQFEKIEQFVLTDPEKSWEAFDEMIN 109
Query: 259 ----------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRL 308
+ YRVV IVSGALN+AAAKK DLEAWFP G ++E
Sbjct: 110 YSEEFYKSLGVPYRVVAIVSGALNNAAAKKYDLEAWFPFQGEYKE--------------- 154
Query: 309 LVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVN 368
KK +VH LN+T CAT R +C +LE QTE G ++P+ LRK++P
Sbjct: 155 -------KK------YVHALNSTLCATERALCCLLENFQTEDGFKVPEPLRKYLPGA--- 198
Query: 369 EAGEIPFVKTAP 380
IPF K P
Sbjct: 199 -VDFIPFTKELP 209
>gi|196041939|ref|ZP_03109226.1| serine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|196027194|gb|EDX65814.1| serine--tRNA ligase [Bacillus cereus NVH0597-99]
Length = 424
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|206972683|ref|ZP_03233623.1| seryl-tRNA synthetase [Bacillus cereus AH1134]
gi|228950564|ref|ZP_04112700.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229067780|ref|ZP_04201099.1| Seryl-tRNA synthetase [Bacillus cereus F65185]
gi|229077289|ref|ZP_04209972.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-2]
gi|229176616|ref|ZP_04304022.1| Seryl-tRNA synthetase [Bacillus cereus 172560W]
gi|365164205|ref|ZP_09360288.1| seryl-tRNA synthetase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423428133|ref|ZP_17405159.1| seryl-tRNA synthetase [Bacillus cereus BAG3X2-2]
gi|423438898|ref|ZP_17415879.1| seryl-tRNA synthetase [Bacillus cereus BAG4X12-1]
gi|423508402|ref|ZP_17484960.1| seryl-tRNA synthetase [Bacillus cereus HD73]
gi|449086682|ref|YP_007419123.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|206732403|gb|EDZ49585.1| seryl-tRNA synthetase [Bacillus cereus AH1134]
gi|228606846|gb|EEK64261.1| Seryl-tRNA synthetase [Bacillus cereus 172560W]
gi|228706012|gb|EEL58317.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-2]
gi|228715333|gb|EEL67190.1| Seryl-tRNA synthetase [Bacillus cereus F65185]
gi|228809107|gb|EEM55590.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|363612807|gb|EHL64334.1| seryl-tRNA synthetase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401106199|gb|EJQ14163.1| seryl-tRNA synthetase [Bacillus cereus BAG3X2-2]
gi|401115522|gb|EJQ23371.1| seryl-tRNA synthetase [Bacillus cereus BAG4X12-1]
gi|402440115|gb|EJV72109.1| seryl-tRNA synthetase [Bacillus cereus HD73]
gi|449020439|gb|AGE75602.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 424
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|228989226|ref|ZP_04149220.1| Seryl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
gi|228995409|ref|ZP_04155080.1| Seryl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|229003023|ref|ZP_04160881.1| Seryl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228758223|gb|EEM07410.1| Seryl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228764335|gb|EEM13211.1| Seryl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|228770501|gb|EEM19071.1| Seryl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
Length = 424
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S P+ ED+N + RT G+ K+++ H DL T + +D E A V G R F
Sbjct: 109 HESAPIGETEDDNVVARTWGEV---KEFNFEPKPHWDLATDLGILDFERAAKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILSSEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLGLPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNAKPEPVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + A+LE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAVLENYQQEDGTIIIPEVLRPYM 417
>gi|229188301|ref|ZP_04315352.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 10876]
gi|228595169|gb|EEK52937.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 10876]
Length = 424
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|30260206|ref|NP_842583.1| seryl-tRNA synthetase [Bacillus anthracis str. Ames]
gi|47525268|ref|YP_016617.1| seryl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183051|ref|YP_026303.1| seryl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49478185|ref|YP_034372.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|65317479|ref|ZP_00390438.1| COG0172: Seryl-tRNA synthetase [Bacillus anthracis str. A2012]
gi|118475790|ref|YP_892941.1| seryl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|165873234|ref|ZP_02217845.1| seryl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167635026|ref|ZP_02393343.1| seryl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|167641731|ref|ZP_02399974.1| seryl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|170688939|ref|ZP_02880141.1| seryl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|170707501|ref|ZP_02897954.1| seryl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|177655686|ref|ZP_02937011.1| seryl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|190569337|ref|ZP_03022229.1| seryl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
gi|196036387|ref|ZP_03103784.1| seryl-tRNA synthetase [Bacillus cereus W]
gi|196047691|ref|ZP_03114895.1| seryl-tRNA synthetase [Bacillus cereus 03BB108]
gi|218901218|ref|YP_002449052.1| seryl-tRNA synthetase [Bacillus cereus AH820]
gi|225862069|ref|YP_002747447.1| seryl-tRNA synthetase [Bacillus cereus 03BB102]
gi|227812690|ref|YP_002812699.1| seryl-tRNA synthetase [Bacillus anthracis str. CDC 684]
gi|228912755|ref|ZP_04076404.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228925270|ref|ZP_04088368.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931519|ref|ZP_04094427.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228943823|ref|ZP_04106210.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229089148|ref|ZP_04220432.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|229119679|ref|ZP_04248942.1| Seryl-tRNA synthetase [Bacillus cereus 95/8201]
gi|229159191|ref|ZP_04287217.1| Seryl-tRNA synthetase [Bacillus cereus R309803]
gi|229182411|ref|ZP_04309664.1| Seryl-tRNA synthetase [Bacillus cereus BGSC 6E1]
gi|229194407|ref|ZP_04321212.1| Seryl-tRNA synthetase [Bacillus cereus m1293]
gi|229600591|ref|YP_002864668.1| seryl-tRNA synthetase [Bacillus anthracis str. A0248]
gi|254686605|ref|ZP_05150464.1| seryl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
gi|254724158|ref|ZP_05185943.1| seryl-tRNA synthetase [Bacillus anthracis str. A1055]
gi|254737007|ref|ZP_05194712.1| seryl-tRNA synthetase [Bacillus anthracis str. Western North
America USA6153]
gi|254744205|ref|ZP_05201886.1| seryl-tRNA synthetase [Bacillus anthracis str. Kruger B]
gi|254751196|ref|ZP_05203235.1| seryl-tRNA synthetase [Bacillus anthracis str. Vollum]
gi|301051753|ref|YP_003789964.1| seryl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
gi|384177922|ref|YP_005563684.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|386733885|ref|YP_006207066.1| Seryl-tRNA(Ser/Sec) synthetase [Bacillus anthracis str. H9401]
gi|421511633|ref|ZP_15958489.1| seryl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|421640988|ref|ZP_16081557.1| seryl-tRNA ligase [Bacillus anthracis str. BF1]
gi|423572840|ref|ZP_17548959.1| seryl-tRNA synthetase [Bacillus cereus MSX-D12]
gi|423608158|ref|ZP_17584050.1| seryl-tRNA synthetase [Bacillus cereus VD102]
gi|46577221|sp|Q81W25.1|SYS_BACAN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|67461763|sp|Q6HPZ8.1|SYS_BACHK RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166200600|sp|A0R891.1|SYS_BACAH RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|226701386|sp|B7JJC8.1|SYS_BACC0 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|254783003|sp|C3P9G2.1|SYS_BACAA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|254783004|sp|C3LIY9.1|SYS_BACAC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|254783005|sp|C1ES19.1|SYS_BACC3 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|30253527|gb|AAP24069.1| serine--tRNA ligase [Bacillus anthracis str. Ames]
gi|47500416|gb|AAT29092.1| seryl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49176978|gb|AAT52354.1| seryl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49329741|gb|AAT60387.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|118415015|gb|ABK83434.1| seryl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|164711032|gb|EDR16598.1| seryl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167510285|gb|EDR85688.1| seryl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|167529500|gb|EDR92250.1| seryl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|170127497|gb|EDS96371.1| seryl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|170667163|gb|EDT17924.1| seryl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|172080026|gb|EDT65126.1| seryl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|190559559|gb|EDV13552.1| seryl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
gi|195991017|gb|EDX54988.1| seryl-tRNA synthetase [Bacillus cereus W]
gi|196021476|gb|EDX60179.1| seryl-tRNA synthetase [Bacillus cereus 03BB108]
gi|218539339|gb|ACK91737.1| seryl-tRNA synthetase [Bacillus cereus AH820]
gi|225785776|gb|ACO25993.1| serine--tRNA ligase [Bacillus cereus 03BB102]
gi|227004875|gb|ACP14618.1| serine--tRNA ligase [Bacillus anthracis str. CDC 684]
gi|228589063|gb|EEK47076.1| Seryl-tRNA synthetase [Bacillus cereus m1293]
gi|228601057|gb|EEK58624.1| Seryl-tRNA synthetase [Bacillus cereus BGSC 6E1]
gi|228624272|gb|EEK81072.1| Seryl-tRNA synthetase [Bacillus cereus R309803]
gi|228663770|gb|EEL19347.1| Seryl-tRNA synthetase [Bacillus cereus 95/8201]
gi|228694189|gb|EEL47868.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|228815847|gb|EEM62081.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228828137|gb|EEM73863.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834384|gb|EEM79923.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846882|gb|EEM91885.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229264999|gb|ACQ46636.1| serine--tRNA ligase [Bacillus anthracis str. A0248]
gi|300373922|gb|ADK02826.1| seryl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
gi|324324006|gb|ADY19266.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|384383737|gb|AFH81398.1| Seryl-tRNA(Ser/Sec) synthetase [Bacillus anthracis str. H9401]
gi|401216527|gb|EJR23236.1| seryl-tRNA synthetase [Bacillus cereus MSX-D12]
gi|401238570|gb|EJR45008.1| seryl-tRNA synthetase [Bacillus cereus VD102]
gi|401818329|gb|EJT17543.1| seryl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|403391883|gb|EJY89150.1| seryl-tRNA ligase [Bacillus anthracis str. BF1]
Length = 424
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|423399570|ref|ZP_17376765.1| seryl-tRNA synthetase [Bacillus cereus BAG2X1-1]
gi|423410266|ref|ZP_17387413.1| seryl-tRNA synthetase [Bacillus cereus BAG2X1-3]
gi|401643395|gb|EJS61093.1| seryl-tRNA synthetase [Bacillus cereus BAG2X1-1]
gi|401648856|gb|EJS66449.1| seryl-tRNA synthetase [Bacillus cereus BAG2X1-3]
Length = 424
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|254761666|ref|ZP_05213684.1| seryl-tRNA synthetase [Bacillus anthracis str. Australia 94]
Length = 424
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|423399663|ref|ZP_17376836.1| seryl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|423479647|ref|ZP_17456362.1| seryl-tRNA synthetase [Bacillus cereus BAG6X1-1]
gi|401658079|gb|EJS75580.1| seryl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|402425009|gb|EJV57168.1| seryl-tRNA synthetase [Bacillus cereus BAG6X1-1]
Length = 424
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 150/326 (46%), Gaps = 66/326 (20%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
H S PV ED+N + RT G+ + + H DL T + +D E V G R F KG
Sbjct: 109 HESAPVGETEDDNVVARTWGEVKEFAYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKG 168
Query: 144 PAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 169 AGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI------- 221
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 --------ESEDYFLIPTAEVPVTNMHRDEILNKDQLPIRYAAFSSCFRSEAGSAGRDTR 273
Query: 254 -----------DLTK-------------------------SIAYRVVNIVSGALNHAAAK 277
+L K + YRV+++ +G L AAK
Sbjct: 274 GLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAK 333
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A R
Sbjct: 334 KYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLAIGR 391
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
+ AILE +Q E G + IP+ LR ++
Sbjct: 392 TVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|172056058|ref|YP_001812518.1| seryl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
gi|229559948|sp|B1YGC4.1|SYS_EXIS2 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|171988579|gb|ACB59501.1| seryl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
Length = 425
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 152/331 (45%), Gaps = 66/331 (19%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
H SVP+ + ED+N ++R GD + H DL+ + VD E V G R F +G
Sbjct: 109 HDSVPIGSTEDDNVVIREVGDKPAFDFEAVPHWDLMEQLKIVDVERAGKVTGSRFVFYRG 168
Query: 144 PAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
L+ L+ + + +K GYT + P + ++ M QL +F+E+ +KV
Sbjct: 169 AGARLERALINFMMDLHQDKNGYTEILPPLMVNRDSMTGTGQLPKFEEDAFKV------- 221
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
E + +L+ T+E P+ +HRD L LPI Y S CFR E
Sbjct: 222 --------EDTNYFLVPTAEVPVTNMHRDEILSADQLPIGYAAYSQCFRSEAGSAGRDTR 273
Query: 254 -----------DLTK-------------------------SIAYRVVNIVSGALNHAAAK 277
+L + + Y+V+++ + L AAK
Sbjct: 274 GLIRQHQFNKVELVRFVKPEESYEQLELLTGQAEEVLKLLKLPYQVLSMCTADLGFTAAK 333
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K D+E W P G +RE+ SCSN D+Q+RR +R+ ++ N K EFVH LN +A A R
Sbjct: 334 KYDIEVWMPSQGVYREISSCSNFEDFQARRAQIRF--RREANAKPEFVHTLNGSALAVGR 391
Query: 338 VICAILETHQTETG-VRIPDCLRKFVPAVYV 367
+ AILE +Q G V IP+ LR ++ + V
Sbjct: 392 TVAAILENYQQADGSVVIPEVLRPYMGGLEV 422
>gi|289706991|ref|ZP_06503326.1| serine--tRNA ligase [Micrococcus luteus SK58]
gi|289556316|gb|EFD49672.1| serine--tRNA ligase [Micrococcus luteus SK58]
Length = 427
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 184/426 (43%), Gaps = 97/426 (22%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWR-------QFRHKADNFNK------------- 55
PEK R +Q+ R ++ LVD+V+E D R Q R + F K
Sbjct: 11 PEKYRASQEARGEDASLVDRVVEADAARRSSIAGFEQLRAEQKAFGKRVAQAKGEEKQAL 70
Query: 56 ---FKNLCSKVIGEKMKAKEPVGDSSTLPG---NHLHPSVPVSNNEDENGIVRTKGD--- 106
K+L ++V + A + L N + VP + ED+ +++ G
Sbjct: 71 LAEVKDLAARVKEAESAAGAAEARLAELQRAFPNLIVDGVP-AGGEDDFVVLKEVGTPRD 129
Query: 107 --TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKG 164
E + H++L ++ +D E GA V+G R FLKG L++ L+Q L +E G
Sbjct: 130 FAAEGFEPRDHLELGELLGAIDMERGAKVSGARFSFLKGVGARLELALMQLGLDLALENG 189
Query: 165 YTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQP 224
+ P+ P +R E MQ + D+E+Y++ E DD YL+ TSE
Sbjct: 190 FVPVIPPTLVRPETMQGTGFDVEHDDEIYRL---------------ERDDLYLVGTSEVA 234
Query: 225 ICAVHRDSWLPEASLPIRYLGVSTCFR-----------------------------QEDL 255
+ H D + + S P+RY G STC+R QED
Sbjct: 235 LAGYHADEIM-DVSAPVRYAGWSTCYRREAGSAGKDTRGIIRVHQFNKLEMFIYAAQEDA 293
Query: 256 TK----------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSN 299
+ YRV++I +G L +AA+K D EAW P G +REL S SN
Sbjct: 294 EAEHERLLAWEERMLGAIEVPYRVIDIAAGDLGLSAARKFDCEAWVPTQGTYRELTSTSN 353
Query: 300 CLDYQSRRLLVRYGQTKKMNEK--IEFVHMLNATACATTRVICAILETHQTETG-VRIPD 356
C +Q+RRL +R + K V LN T ATTR I AILE HQ G V +P
Sbjct: 354 CTTFQARRLNIRERVRTEDGSKGGTRMVATLNGT-LATTRWIVAILENHQNADGSVTVPA 412
Query: 357 CLRKFV 362
LR ++
Sbjct: 413 ALRPYL 418
>gi|419846933|ref|ZP_14370136.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 1-6B]
gi|419855658|ref|ZP_14378411.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 44B]
gi|386412477|gb|EIJ27144.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 1-6B]
gi|386415203|gb|EIJ29740.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 44B]
Length = 428
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 194/446 (43%), Gaps = 102/446 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
+LD+ R + V+++Q+ R ++VELVD+V+ +D R+
Sbjct: 1 MLDIQFIREH----TDIVKESQRKRGESVELVDEVLSSDTARREALKAFEEARAQQKEIG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA + K L KV K KA + +T N + P P E
Sbjct: 57 KKVASAPADEKAKLIAETKELSQKVSEYKSKADSAAEEYTTAMWKLSNIVEPEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G V G R YFL+G +Q+
Sbjct: 116 DDYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H + L + P+RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 ----------QEDLTK----------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QED K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYAKQEDSYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL +R ++M + V LN T ATTR + AI+E
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNIR----ERMEDGGTRPVSTLNGT-LATTRWLVAIME 396
Query: 345 THQTETG-VRIPDCLRKFVPAVYVNE 369
HQ + G + IP +R ++ V E
Sbjct: 397 NHQQKDGSIEIPKAMRAYMGGTEVIE 422
>gi|52145196|ref|YP_081631.1| seryl-tRNA synthetase [Bacillus cereus E33L]
gi|67461705|sp|Q63HF6.1|SYS_BACCZ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|51978665|gb|AAU20215.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus cereus E33L]
Length = 424
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFNFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|359770599|ref|ZP_09274072.1| seryl-tRNA synthetase [Gordonia effusa NBRC 100432]
gi|359312283|dbj|GAB16850.1| seryl-tRNA synthetase [Gordonia effusa NBRC 100432]
Length = 418
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 188/434 (43%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFN------- 54
++DL + R +P+ VR++Q+ R ++ LVD +++ D R +AD
Sbjct: 1 MIDLKILRE----NPDLVRQSQRTRGEDPGLVDVLLDADATRRSSIVEADALRSEQKTLG 56
Query: 55 ----------------KFKNLCSKV---IGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
K K L +V + + +A++ + N + P + E
Sbjct: 57 KQVGKSSGDEKAALLAKGKELAEQVKAAVARQNQAEDAAEQAQRSISNIVQDGAP-AGGE 115
Query: 96 DENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ G+ ++ H+++ + +D E GA V+G R YFL G LQ+GL+
Sbjct: 116 DDFVVLEHVGEPRDIPNARDHLEIGEALGLLDMERGAKVSGSRFYFLTGLGAMLQLGLLN 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A +K G+T + P +R E+M L +E+Y + DD
Sbjct: 176 MAAAKATANGFTLMIPPVLVRPEIMAGTGFLGAHSDEIYHLAD---------------DD 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H + L ++ P RY G S+CFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHSNEILDLSTGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ G L +AA+K D EAWFP
Sbjct: 281 GFIYCKPEDADAEHLKLLNWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWFPTQN 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC YQ+RRL +RY + + K + LN T ATTR I AILE HQ
Sbjct: 341 TYRELTSTSNCTTYQARRLAIRY---RDDDGKPQIAATLNGT-LATTRWIVAILENHQQS 396
Query: 350 TG-VRIPDCLRKFV 362
G V +P+ L +FV
Sbjct: 397 DGTVVLPEELARFV 410
>gi|222150263|ref|YP_002559416.1| seryl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
gi|254783034|sp|B9E909.1|SYS_MACCJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|222119385|dbj|BAH16720.1| seryl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
Length = 423
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 186/436 (42%), Gaps = 103/436 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ LFRTE PE V+K + R + +VD+++E D+ R+ + + +N S
Sbjct: 1 MLDIKLFRTE----PEFVKKKLEMRAIDTSIVDEILELDIAARELTARTEELKAKRNKTS 56
Query: 62 KVIGEKMKAKEPVGD----------------------SSTLPG------NHLHPSVPVSN 93
+ I +K + KE D S TL N + P
Sbjct: 57 EEIAQKKRNKENADDAIKAMREVGEEIKRIDTELNEVSQTLKDKLVRLPNLVSDETPFGK 116
Query: 94 NEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
+EDEN V+ G D E + +H D++ + D E A V+G R FL L
Sbjct: 117 DEDENVEVKKWGTPRTFDFEAK---AHWDIVENLKMADFERAAKVSGARFAFLTKDGARL 173
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
+ L+ + L GY + TP + M QL +F+E+L+KV E
Sbjct: 174 ERALMNFMLDTHRANGYEEMVTPQLVNAASMFGTGQLPKFEEDLFKV------------E 221
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---------------- 252
K+ L Y I TSE P+ +RD L LP ++ ++ CFR
Sbjct: 222 KEGL---YTIPTSEVPLTNFYRDEILTNDMLPTKFTAMTACFRSEAGSAGRDTRGLIRMH 278
Query: 253 --------------------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEA 283
ED+T+S I YR + + SG + AAK D+E
Sbjct: 279 QFNKVEMVRFERPEDSYAALEDMTRSAESILEKLNIPYRTIALCSGDIGFGAAKTYDVEV 338
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
W P A++E+ SCSN D+Q+RR +R+ + K N K E V+ LN + A R A++
Sbjct: 339 WLPSYDAYKEISSCSNMTDFQARRANIRFKRDK--NAKAELVNTLNGSGLAVGRTFAAVV 396
Query: 344 ETHQTETG-VRIPDCL 358
E +Q E G + +P+ L
Sbjct: 397 ENYQNEDGSITVPEVL 412
>gi|262066815|ref|ZP_06026427.1| serine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
gi|291379481|gb|EFE86999.1| serine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
Length = 421
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 159/350 (45%), Gaps = 82/350 (23%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKY-----SHVDLITMIDGVDSEAGAIV 133
T+P N HPS P+ +ED N +R G+ KK+ +H D+ + +D E G+ +
Sbjct: 102 TIP-NVYHPSTPIGPDEDSNKEIRRWGEP---KKFDFEPKAHWDIGEDLGILDFERGSKL 157
Query: 134 AGGRGYFLKGPAVCLQVGLVQYAL-SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
+G R +G A L+ L+ + L + +E GYT TPF ++ EV + QL +F+E++
Sbjct: 158 SGSRFVLYRGAAARLERALISFMLDTHTLEHGYTEHITPFMVKAEVCEGTGQLPKFEEDM 217
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
YK DD YLI+TSE + +HR L ++ LP Y S CFR+
Sbjct: 218 YKTT----------------DDMYLISTSEITMTNIHRKEILEQSELPKYYTAYSPCFRR 261
Query: 253 E---------------------------------DLTK------------SIAYRVVNIV 267
E +L K + YRV+ +
Sbjct: 262 EAGSYGRDVKGLIRLHQFNKVEMVKITDAESSYDELEKMVNNAETILQRLELPYRVIQLC 321
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
SG L +AAK DLE W P +RE+ SCSNC +Q+RR+ ++Y K+ EF H
Sbjct: 322 SGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQARRMGLKY----KVTNGSEFCHT 377
Query: 328 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
LN + A R + AI+E +Q E G + VP V + G I +K
Sbjct: 378 LNGSGLAVGRTLVAIMENYQQEDGSFL-------VPKVLIPYMGGIDVIK 420
>gi|340753156|ref|ZP_08689947.1| seryl-tRNA synthetase [Fusobacterium sp. 2_1_31]
gi|422315545|ref|ZP_16396977.1| seryl-tRNA synthetase [Fusobacterium periodonticum D10]
gi|229424092|gb|EEO39139.1| seryl-tRNA synthetase [Fusobacterium sp. 2_1_31]
gi|404592313|gb|EKA94161.1| seryl-tRNA synthetase [Fusobacterium periodonticum D10]
Length = 421
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 158/349 (45%), Gaps = 80/349 (22%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRK----KYSHVDLITMIDGVDSEAGAIVA 134
T+P N HPS P+ +ED N +R G E RK +H D+ + +D E GA ++
Sbjct: 102 TIP-NVYHPSTPIGPDEDSNKEIRRWG--EPRKFDFEPKAHWDIGEDLGILDFERGAKLS 158
Query: 135 GGRGYFLKGPAVCLQVGLVQYAL-SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELY 193
G R +G A L+ L+ + L + +E GYT TPF ++ EV + QL +F+E++Y
Sbjct: 159 GSRFVLYRGAAARLERALISFMLDTHTLEHGYTEHITPFIVKAEVCEGTGQLPKFEEDMY 218
Query: 194 KVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
K DD YLI+TSE + +HR L ++ LP Y S CFR+E
Sbjct: 219 KTT----------------DDMYLISTSEITMTNIHRKEILEQSELPKYYTAYSPCFRRE 262
Query: 254 ---------------------------------DLTK------------SIAYRVVNIVS 268
+L K + YRV+ + S
Sbjct: 263 AGSYGRDVKGLIRLHQFNKVEMVKITDAESSYDELEKMVNNAETILQRLELPYRVIQLCS 322
Query: 269 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
G L +AAK DLE W P +RE+ SCSNC +Q+RR+ ++Y K+ EF H L
Sbjct: 323 GDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQARRMGLKY----KVTNGSEFCHTL 378
Query: 329 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
N + A R + AI+E +Q E G + VP V + G I +K
Sbjct: 379 NGSGLAVGRTLVAIMENYQQEDGSFL-------VPKVLIPYMGGIDVIK 420
>gi|422499745|ref|ZP_16576003.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA2]
gi|313829289|gb|EFS67003.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA2]
Length = 424
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 191/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
++D L RT DP+ VR++Q R ++ +VD V+ D R+
Sbjct: 1 MIDPKLLRT----DPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ ++ K + +V K A E + L GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E + H+++ + +D E G ++G R Y L G L+
Sbjct: 116 DEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 --DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 254 --------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D + I+++V+++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQISFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +R+ + + +E + LN T CA TRVI +LE
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTLCAMTRVIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VRIP+ LR ++
Sbjct: 397 HQQADGSVRIPEALRPYL 414
>gi|206978343|ref|ZP_03239217.1| seryl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217957593|ref|YP_002336135.1| seryl-tRNA synthetase [Bacillus cereus AH187]
gi|222093786|ref|YP_002527834.1| seryl-tRNA synthetase [Bacillus cereus Q1]
gi|228983272|ref|ZP_04143487.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229136860|ref|ZP_04265489.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST26]
gi|229153796|ref|ZP_04281928.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 4342]
gi|375282113|ref|YP_005102546.1| seryl-tRNA synthetase [Bacillus cereus NC7401]
gi|423357855|ref|ZP_17335445.1| seryl-tRNA synthetase [Bacillus cereus IS075]
gi|423374929|ref|ZP_17352266.1| seryl-tRNA synthetase [Bacillus cereus AND1407]
gi|423554049|ref|ZP_17530375.1| seryl-tRNA synthetase [Bacillus cereus ISP3191]
gi|423572595|ref|ZP_17548773.1| seryl-tRNA synthetase [Bacillus cereus MSX-A12]
gi|226701626|sp|B7HPS8.1|SYS_BACC7 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|254783006|sp|B9IYI0.1|SYS_BACCQ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|206743435|gb|EDZ54868.1| seryl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217068054|gb|ACJ82304.1| seryl-tRNA synthetase [Bacillus cereus AH187]
gi|221237832|gb|ACM10542.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus cereus Q1]
gi|228629665|gb|EEK86360.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 4342]
gi|228646595|gb|EEL02800.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST26]
gi|228776452|gb|EEM24803.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|358350634|dbj|BAL15806.1| seryl-tRNA synthetase [Bacillus cereus NC7401]
gi|401073704|gb|EJP82118.1| seryl-tRNA synthetase [Bacillus cereus IS075]
gi|401093304|gb|EJQ01413.1| seryl-tRNA synthetase [Bacillus cereus AND1407]
gi|401182001|gb|EJQ89147.1| seryl-tRNA synthetase [Bacillus cereus ISP3191]
gi|401195953|gb|EJR02902.1| seryl-tRNA synthetase [Bacillus cereus MSX-A12]
Length = 424
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKDQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|357013960|ref|ZP_09078959.1| SerS [Paenibacillus elgii B69]
Length = 426
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 191/441 (43%), Gaps = 98/441 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ L R D + V++ +R KN+E +D+ DLK R+ + + +N+ S
Sbjct: 1 MLDIKLLR----ADLDMVKQGMANRGKNLEELDRFTSLDLKRRELLQETEQLKNRRNVVS 56
Query: 62 KVIGEKMKAKEP----------VGDS--------STLPG----------NHLHPSVPVSN 93
+ + + KAKE VGD L G N VPV
Sbjct: 57 QEVAQLKKAKENADHLIEEMKVVGDRIKSLDEEIRGLEGELDAILLAIPNMPQADVPVGG 116
Query: 94 NEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
+E+ N +R G+ + H + +D +D E+ A V G R F KG L+
Sbjct: 117 SEENNVEIRRVGEVPSFSFEPKPHWETAQELDILDFESAAKVTGSRFVFYKGLGARLERA 176
Query: 152 LVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ + + E GYT + P+ + ++ + QL +F+E+++K+ G
Sbjct: 177 LMNFMMDLHADEHGYTEMLPPYLVNRDSLMGTGQLPKFEEDVFKIEGS------------ 224
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
D ++I T+E P+ HRD L LP ++ S CFR E
Sbjct: 225 ---DYFMIPTAEVPVTNYHRDDILALEDLPKYFVAFSACFRSEAGSAGRDTRGLIRQHQF 281
Query: 254 ---DLTKSI-------------------------AYRVVNIVSGALNHAAAKKLDLEAWF 285
+L K + YRV+ + +G L +++K DLE W
Sbjct: 282 NKVELVKMVLPEQSNEELEKLTGEAEKVLQLLKLPYRVMALCTGDLGFSSSKTYDLEVWL 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P S +RE+ SCSN D+Q+RR +R+ + K K EFVH LN + A R + AILE
Sbjct: 342 PSSNTYREISSCSNFEDFQARRANIRFRRDAKA--KPEFVHTLNGSGLALGRTVAAILEN 399
Query: 346 HQTETG-VRIPDCLRKFVPAV 365
+Q E G V IP+ L+ ++ V
Sbjct: 400 YQQEDGSVLIPEVLQPYMGNV 420
>gi|145591868|ref|YP_001153870.1| seryl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
gi|145283636|gb|ABP51218.1| seryl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
Length = 463
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 188/444 (42%), Gaps = 114/444 (25%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADN----FNKF-------------- 56
+P+ VRK R + LV+K + D +WRQ + + D +NK
Sbjct: 26 NPDAVRKVLVARRMDPSLVEKFLGLDERWRQLKKEVDELRHEYNKLSREGARAPPERRRE 85
Query: 57 -----KNLCSKV------IGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKG 105
K L +++ + + KA+E V + P N +H SVP ++ VR G
Sbjct: 86 LVERAKELAARLEKVEKELEDVEKAREEV--LWSFP-NLIHESVPTCPEGVDSVPVRYWG 142
Query: 106 DTEV-----------------RKKYSHVDLI-TMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+V R H D+ ++ D+ VAG R Y+L V
Sbjct: 143 VVKVANNAAELPRGVDYVVVERSPVGHADMAEVVLKMADTLKAGEVAGSRFYYLFDDLVW 202
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L L YA+ ++G+ P+ P+ ++ +V++ V F + +YK+ G
Sbjct: 203 LDFALAMYAMDYLTQRGFRPVIPPYMLKFDVIRRVLDFDTFKDAIYKIDG---------- 252
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------- 253
+D YLIAT+E I A L E LP Y+G S CFR+E
Sbjct: 253 -----EDLYLIATAEHGIAAYLYKRELVEEELPQLYVGWSPCFRKEAGAGNRDLKGIFRV 307
Query: 254 ----------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLE 282
++TK+ + YRVVNI + L AAKK D+E
Sbjct: 308 HIFHKVEQFVFSLPEESWKWHEEITKNTEELIRGLGLPYRVVNICAHDLGAPAAKKYDIE 367
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
W+P G +REL SCSN D+QS RL +R + K EFVH LN T ATTR I AI
Sbjct: 368 VWYPAQGMYRELASCSNVTDWQSYRLGIR---VTRKGMKREFVHTLNCTGLATTRTITAI 424
Query: 343 LETHQTETG-VRIPDCLRKFVPAV 365
LE Q E G V IP LR ++ +
Sbjct: 425 LENFQREDGAVEIPKALRPYLEPI 448
>gi|417556405|ref|ZP_12207464.1| serine--tRNA ligase [Gardnerella vaginalis 315-A]
gi|333602900|gb|EGL14325.1| serine--tRNA ligase [Gardnerella vaginalis 315-A]
Length = 428
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 194/439 (44%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR----------------- 44
+LD+ R + V+++Q+ R ++VELVD+V+ D R
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIG 56
Query: 45 ------QFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
Q KA + K L KV K ++++ D +T N + P E
Sbjct: 57 KKVAAAQDSEKATLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFTAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G+S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGLSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSRAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL VR ++M + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR----ERMEDGGTRPVSTLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ E G + IP ++ ++
Sbjct: 397 NHQHEDGSIDIPKAMQAYM 415
>gi|255545800|ref|XP_002513960.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223547046|gb|EEF48543.1| seryl-tRNA synthetase, putative [Ricinus communis]
Length = 517
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 167/342 (48%), Gaps = 81/342 (23%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N HP+VP+ ED + + + G +++S H+ L +D D +A A V+G +
Sbjct: 184 NMTHPAVPI-GVEDCSTVRKMVGSP---REFSFPVKDHLQLGKELDLFDFDAAAEVSGSK 239
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE-ELYKVI 196
Y+LK AV L++ LV + LS+ +++G+TPL TP +R V+++ + D ++Y +
Sbjct: 240 FYYLKNEAVMLEMALVNWTLSEVMKRGFTPLTTPELVRASVVEKCGFQPRGDNTQVYSIE 299
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR----- 251
G D+ LI T+E P+ +H +S L + LP++Y+ S CFR
Sbjct: 300 G---------------SDQCLIGTAEIPVGGIHMESILTASMLPLKYVAFSHCFRTEAGA 344
Query: 252 --------------------------------------QEDLTKSIA--YRVVNIVSGAL 271
+EDL S+ ++ +++ S L
Sbjct: 345 AGTATRGLYRVHQFSKVEMFILCPAEESESHHEELIKIEEDLFSSLGLHFKTIDMASADL 404
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT-------KKMNEKI-- 322
A +K D+EAW PG G + E+ S SNC DYQSRRL +RY + KK +
Sbjct: 405 GAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPSDPTLRNPKKGKSSLGP 464
Query: 323 -EFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+FVH LNATACA R++ +LE +Q E G V IP+ LR F+
Sbjct: 465 TKFVHTLNATACAVPRMLICLLENYQQEDGSVIIPEPLRPFM 506
>gi|441510939|ref|ZP_20992837.1| serine--tRNA ligase [Gordonia aichiensis NBRC 108223]
gi|441444917|dbj|GAC50798.1| serine--tRNA ligase [Gordonia aichiensis NBRC 108223]
Length = 423
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 186/434 (42%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF-------- 53
++DL + R DP+ VR +Q+ R ++ LVD +++ D R AD+
Sbjct: 1 MIDLKIVRD----DPDLVRASQRVRGEDPGLVDVLLDADSARRAAIVDADSLRSEQKALG 56
Query: 54 ---------------NKFKNLCSKV---IGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
+K K L +V + + +A + ++ N + + P E
Sbjct: 57 KQVGKASGDEKAALLSKGKELAEQVKAAVARQNEADDAASNAQRAISNIVEGAPP--GGE 114
Query: 96 DENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ G E+ H++L + +D E GA V+G R YFL G LQ+GL+
Sbjct: 115 DDYVVLEYVGQPREIENPKDHLELGESLGLIDMERGAKVSGSRFYFLTGQGAMLQLGLLT 174
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A K G+T + P +R EVM L +E+Y + D+ DD
Sbjct: 175 MAAQKATANGFTLMIPPVLVRPEVMGGTGFLGAHADEVYHL--------------DKEDD 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H D + + P RY G STCFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHMDEIIDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ G L +AA+K D EAW P
Sbjct: 281 GFVYCKPEDAAAEHQKLLGWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQQ 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL +RY + + K + LN T ATTR I AILE HQ
Sbjct: 341 TYRELTSTSNCTTFQARRLSIRY---RDDSGKPQIAATLNGT-LATTRWIVAILENHQQA 396
Query: 350 TG-VRIPDCLRKFV 362
G V +PD L ++V
Sbjct: 397 DGSVVLPDELARYV 410
>gi|216263748|ref|ZP_03435742.1| seryl-tRNA synthetase [Borrelia afzelii ACA-1]
gi|215979792|gb|EEC20614.1| seryl-tRNA synthetase [Borrelia afzelii ACA-1]
Length = 425
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 160/336 (47%), Gaps = 69/336 (20%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
N L P VP+ N+E++N ++ G K H++L +D +D + V+G + Y+
Sbjct: 104 NILSPDVPIGNSEEDNFEIKKVGIIPRFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYY 163
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LK AV L++ L+ ++L+K EKG+ TP +VA+ E + IG
Sbjct: 164 LKNEAVFLEIALINFSLNKLREKGFNVFITP---------DVAR-----EFIVDGIGFNP 209
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----DL 255
+ +S K E DKYL+ TSE + + + + + +LPI+ G S CFR+E L
Sbjct: 210 RGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAGAYGQL 268
Query: 256 TKS----------------------------------------IAYRVVNIVSGALNHAA 275
+K I YRV+NI S L A
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKAEESSIIHDEFLSIQEQIFTELEIPYRVLNICSFDLGSPA 328
Query: 276 AKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
KK D+EAW PG G + E+ S SNC DYQSRRL +RY N +F HM+N TA
Sbjct: 329 YKKYDIEAWMPGRDGKGGYGEITSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNGTA 385
Query: 333 CATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 386 IATTRVIISILENFQDEKGGVRIPKSLVKYTGFDYI 421
>gi|392958797|ref|ZP_10324303.1| seryl-tRNA ligase [Bacillus macauensis ZFHKF-1]
gi|391875187|gb|EIT83801.1| seryl-tRNA ligase [Bacillus macauensis ZFHKF-1]
Length = 425
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 152/333 (45%), Gaps = 67/333 (20%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGG 136
TLP N H SVPV ED+N VR GD + H DL T +D VD E A V G
Sbjct: 103 TLP-NLPHESVPVGETEDDNVPVRHWGDVREFTHEVKPHWDLATELDIVDFERAAKVTGS 161
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV 195
R F KG L+ L+ + ++ YT + P+ + ++ M QL +F+E+ +K+
Sbjct: 162 RFAFYKGAGARLERALINLMMDYHEDQHDYTEVLPPYMVNRDSMTGTGQLPKFEEDAFKI 221
Query: 196 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-- 253
+D +LI T+E P+ +HR L LP Y+ S CFR E
Sbjct: 222 ---------------REEDYFLIPTAEVPVTNMHRQEILTAEDLPKAYVAYSACFRSEAG 266
Query: 254 -------------------------------DLTK------------SIAYRVVNIVSGA 270
+L K + YRV+++ +
Sbjct: 267 SAGRDTRGLIRQHQFNKVELVRFVKPEDSYEELEKLVGHAEKILQMLQLPYRVMSMCTAD 326
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
L AAKK D+E W P G +RE+ SCSN D+Q+RR +R+ + K K EFVH LN
Sbjct: 327 LGFTAAKKYDIEVWLPSYGTYREISSCSNFEDFQARRAQIRFRREAKG--KPEFVHTLNG 384
Query: 331 TACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+A A R + AILE +Q E G + IP+ LR ++
Sbjct: 385 SALAIGRTVAAILENYQQEDGSIIIPEVLRPYM 417
>gi|415721873|ref|ZP_11468806.1| seryl-tRNA synthetase [Gardnerella vaginalis 00703Bmash]
gi|415725121|ref|ZP_11470124.1| seryl-tRNA synthetase [Gardnerella vaginalis 00703C2mash]
gi|388060578|gb|EIK83270.1| seryl-tRNA synthetase [Gardnerella vaginalis 00703Bmash]
gi|388061926|gb|EIK84562.1| seryl-tRNA synthetase [Gardnerella vaginalis 00703C2mash]
Length = 428
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 196/443 (44%), Gaps = 110/443 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIE-NDLKWRQFR------------- 47
+LD+ R + V+++Q+ R ++VELVD+V+ +DL+ +
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLRADDLRRTSLKAFEAARADQKAIG 56
Query: 48 ---------HKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ + K L KV K ++++ D +T N + P E
Sbjct: 57 KKVAAASADQKAELIAQTKELAQKVAQFKAQSEQATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSRAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEF-----VHMLNATACATTRVIC 340
P G +REL S SNC +YQ+RRL VR E+IE V LN T ATTR +
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR--------ERIEDGGTRPVSTLNGT-LATTRWLV 392
Query: 341 AILETHQTETG-VRIPDCLRKFV 362
AILE HQ E G + IP ++ ++
Sbjct: 393 AILENHQHEDGSIDIPKAMQAYM 415
>gi|312134746|ref|YP_004002084.1| seryl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
gi|311774797|gb|ADQ04284.1| seryl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
Length = 420
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 157/333 (47%), Gaps = 69/333 (20%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGG 136
T+P N H SVPV ++ EN VR GD V + H ++ + +D E + V+G
Sbjct: 102 TIP-NIPHESVPVGKDDTENVEVRRWGDVRVPDFELKPHWEIGINLGILDFERASKVSGS 160
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV 195
R F +G L+ L+ + L IEK GYT L+ PF + ++ M QL +F+E+ +K
Sbjct: 161 RFTFYRGLGARLERALINFMLDLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKT 220
Query: 196 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR---- 251
DD +LI T+E P+ HR+ L E LPI+Y+ S CFR
Sbjct: 221 T----------------DDYFLIPTAEVPVTNYHREEILKEEDLPIKYVAYSACFRAEAG 264
Query: 252 ---------------------------------------QEDLTKSIA--YRVVNIVSGA 270
ED+ K + YRVV + SG
Sbjct: 265 AAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELEKLTADAEDVLKELGLPYRVVLLCSGD 324
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
L ++AK D+E W P G + E+ SCSN YQ+RR +R+ ++ + K+++VH LN
Sbjct: 325 LGFSSAKTYDIEVWMPSYGRYVEISSCSNFESYQARRANIRF---RRKDGKLDYVHTLNG 381
Query: 331 TACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+ A R + AILE Q + G V +P+ LRK++
Sbjct: 382 SGLAVGRTLAAILENFQQKDGTVVVPEVLRKYM 414
>gi|358465762|ref|ZP_09175660.1| hypothetical protein HMPREF9093_00119 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069729|gb|EHI79609.1| hypothetical protein HMPREF9093_00119 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 421
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 189/440 (42%), Gaps = 110/440 (25%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG----------- 65
E +++ K+R NV++ D +E D K R+ + ++ + +N S I
Sbjct: 12 EMLKEMLKNRNSNVDM-DAFVELDAKRREVLSEVESLKRERNNVSAEIATLKKEKKDANH 70
Query: 66 --EKM---------------KAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTE 108
EKM + E + D N HPS P+ +ED N +R G
Sbjct: 71 LIEKMGGVSSKIKELDAELVEIDEKIKDIQLNIPNVYHPSTPIGPDEDHNLEIRKWG--- 127
Query: 109 VRKKY-----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS-KWIE 162
V +K+ SH D+ + +D E GA ++G R +G A L+ ++ + L +E
Sbjct: 128 VPRKFNFEPKSHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERAIINFMLDVHTLE 187
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSE 222
+GYT TPF ++ EV + QL +F+E++YK DD YLI+TSE
Sbjct: 188 EGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTT----------------DDMYLISTSE 231
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------------------- 253
+ +HR L ++ LP Y S CFR+E
Sbjct: 232 ITMTNIHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAE 291
Query: 254 ----DLTK------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
+L K + YRV+ + SG L +AAK DLE W P +RE+ SC
Sbjct: 292 SSYDELEKMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSC 351
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDC 357
SNC +Q+RR+ ++Y K+ EF H LN + A R + AI+E +Q E G +
Sbjct: 352 SNCEAFQARRMGLKY----KVTNGSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFL--- 404
Query: 358 LRKFVPAVYVNEAGEIPFVK 377
VP V + G I +K
Sbjct: 405 ----VPKVLIPYMGGIDVIK 420
>gi|357019669|ref|ZP_09081917.1| seryl-tRNA synthetase [Mycobacterium thermoresistibile ATCC 19527]
gi|356480574|gb|EHI13694.1| seryl-tRNA synthetase [Mycobacterium thermoresistibile ATCC 19527]
Length = 417
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 191/434 (44%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR +Q+ R ++ LVD ++ D R ADN + S
Sbjct: 1 MIDLKLLRE----NPDVVRASQRARGEDPALVDALLAADEARRAAVSAADNLRAEQKAAS 56
Query: 62 KVIGEKMKAKEP--------------------------VGDSSTLPGNHLHPSVPVSNNE 95
+ +G+ + P + ++ N + VP E
Sbjct: 57 RSVGKASPDERPALLERAKELAEQVKAAEARQAEAEQALTEAHMAISNIVIDGVP-PGGE 115
Query: 96 DENGIVRTKGD-TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ T G+ T + H++L + +D E GA V+G R YFL G LQ+GL+Q
Sbjct: 116 DDFVVLDTVGEPTPIDNPRDHLELGESLGLIDVERGAKVSGSRFYFLTGAGALLQLGLLQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A+ + G+TP+ P +R ++M L E+Y++ E DD
Sbjct: 176 LAMRVATQNGFTPMIPPVLVRPQIMSGTGFLGAHAAEVYRI---------------ESDD 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H D L ++ P+RY G S+CFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHADEILDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ +G L +AA+K D EAW P
Sbjct: 281 AFVYCRPEEAEAEHDRLLAWQKKMLAHIEVPYRVIDVAAGDLGASAARKYDCEAWLPSQQ 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
A+REL S SNC +Q+RRL RY + N + + LN T ATTR + AILE HQ
Sbjct: 341 AYRELTSTSNCTTFQARRLATRY---RDENGRPQIAATLNGT-LATTRWLVAILENHQRP 396
Query: 350 TG-VRIPDCLRKFV 362
G VR+P+ LR +V
Sbjct: 397 DGSVRVPEALRPYV 410
>gi|46190424|ref|ZP_00121503.2| COG0172: Seryl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|189440622|ref|YP_001955703.1| seryl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|317482165|ref|ZP_07941188.1| seryl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
gi|238692045|sp|B3DQG7.1|SYS_BIFLD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|189429057|gb|ACD99205.1| Seryl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|316916399|gb|EFV37798.1| seryl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
Length = 428
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 192/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
+LD+ R + V+++Q+ R ++VELVD+V+ +D R+
Sbjct: 1 MLDIQFIREH----TDIVKESQRKRGESVELVDEVLSSDTARREALKAFEEARAQQKEIG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA + K L KV K KA + +T N + P P E
Sbjct: 57 KKVASAPADEKAKLIAETKELSQKVSEYKSKADSAAEEYTTAMWKLSNIVEPEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G V G R YFL+G +Q+
Sbjct: 116 DDYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H + L + P+RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 ----------QEDLTK----------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QED K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYAKQEDSYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL +R ++M + V LN T ATTR + AI+E
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNIR----ERMEDGGTRPVSTLNGT-LATTRWLVAIME 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ + G + IP +R ++
Sbjct: 397 NHQQKDGSIEIPQAMRAYM 415
>gi|374326838|ref|YP_005085038.1| seryl-tRNA synthetase [Pyrobaculum sp. 1860]
gi|356642107|gb|AET32786.1| seryl-tRNA synthetase [Pyrobaculum sp. 1860]
Length = 451
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 190/459 (41%), Gaps = 122/459 (26%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADN----FNKFKNLCSKVIGEKMK-- 69
P+ VR+ R + LVDK + D KWR+ + + D +NK +K EK K
Sbjct: 13 PDVVRRVLTARRLDPSLVDKFLHLDEKWRRLKKEVDEARHEYNKLSREGAKAPPEKRKEI 72
Query: 70 ---AKEPVGDSS------------------TLPGNHLHPSVPVSNNEDENGIVRTKGDTE 108
A+E + P N +H SVPV ++ VR G +
Sbjct: 73 VEKARELAAKLEKMEKELEEAEREREELLWSFP-NLIHESVPVCPEGVDSVPVRHWGVVK 131
Query: 109 VRKKYS------------------HVDLI-TMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
+ K S H D+ ++ D+ VAG R Y+L V L
Sbjct: 132 LVKDASTPLDKGVDYVVVERAPVGHADMAEAVLKMADTLKAGEVAGSRFYYLFDDLVWLD 191
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L YA+ +KG+ P+ P+ ++ ++++ V F + +YK+ G
Sbjct: 192 FALAMYAMDYLTQKGFRPVIPPYMLKLDLIRRVLDFDTFKDAIYKIEG------------ 239
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
+D YLIAT+E I A L E LP Y+G S CFR+E
Sbjct: 240 ---EDLYLIATAEHGIAAYLYKRDLVEEELPQLYVGWSPCFRKEAGAGSRDIKGIFRVHI 296
Query: 254 --------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAW 284
++TK+ + YRVVNI + L AAKK D+E W
Sbjct: 297 FHKVEQFVFSLPEDSWKWHEEITKNTEELIRGLGLPYRVVNICAHDLGSPAAKKYDIEVW 356
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
+P G +REL SCSN D+QS RL +R + + E+VH LN T ATTR I AILE
Sbjct: 357 YPAQGMYRELASCSNVTDWQSYRLGIR---VTRKGMRREYVHTLNCTGLATTRTITAILE 413
Query: 345 THQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
Q E G V IP LR ++ +KTAP D
Sbjct: 414 NFQREDGAVEIPKALRPYLEP-----------IKTAPKD 441
>gi|365966081|ref|YP_004947646.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn17]
gi|422449791|ref|ZP_16526512.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA2]
gi|315110490|gb|EFT82466.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA2]
gi|365742762|gb|AEW82456.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn17]
Length = 424
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 191/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
++D L RT DP+ VR++Q R ++ +VD V+ D R+
Sbjct: 1 MIDPKLLRT----DPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ ++ K + +V K A E + L GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E + H+++ + +D E G ++G R Y L G L+
Sbjct: 116 DEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 --DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 254 --------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D + I+++V+++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQISFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +R+ + + +E + LN T CA TR+I +LE
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VRIP+ LR ++
Sbjct: 397 HQQADGSVRIPEALRPYL 414
>gi|343926267|ref|ZP_08765776.1| seryl-tRNA synthetase [Gordonia alkanivorans NBRC 16433]
gi|343763896|dbj|GAA12702.1| seryl-tRNA synthetase [Gordonia alkanivorans NBRC 16433]
Length = 419
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 181/433 (41%), Gaps = 94/433 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELV-----------------------DKVIE 38
++DL + R DP+ VR +Q+ R ++ LV K +
Sbjct: 1 MIDLKIVRD----DPDLVRTSQRTRGEDPGLVDALLDADAARRAAIVDADTLRSEQKALG 56
Query: 39 NDLKWRQFRHKADNFNKFKNLCSKV---IGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
+ Q K K K L +V + + +A E + N + P P +
Sbjct: 57 KQVGKAQGDEKQALLAKGKELAEQVKAAVARQSEADEAAAKAHRAISNIVAPEAPAGGED 116
Query: 96 DENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
D + E+ H++L + +D E GA V+G R YFL G LQ+GL+
Sbjct: 117 DYIVLEHVGEPREIENPKDHLELGESLGLLDMERGAKVSGSRFYFLTGQGAFLQLGLLNM 176
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
A K G+T + P +R EVM+ L +E+Y + D+ DD
Sbjct: 177 AAQKAAANGFTLMVPPVLVRPEVMEGTGFLGAHADEVYHL--------------DKDDDL 222
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------- 253
YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 223 YLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEG 282
Query: 254 ---------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
D+ +I YRV+++ G L +A++K D EAW P A
Sbjct: 283 FIYCRPEDAEAEHQRLLGWEKDMLAAIDVPYRVIDVAGGDLGSSASRKFDCEAWVPTQNA 342
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL +RY + N K + LN T ATTR + AILE HQ
Sbjct: 343 YRELTSTSNCTTFQARRLSIRY---RDENGKPQTAATLNGT-LATTRWLVAILENHQQPD 398
Query: 351 G-VRIPDCLRKFV 362
G V++P L KFV
Sbjct: 399 GSVKLPPELAKFV 411
>gi|149241134|pdb|2DQ3|A Chain A, Crystal Structure Of Aq_298
gi|149241135|pdb|2DQ3|B Chain B, Crystal Structure Of Aq_298
Length = 425
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 194/443 (43%), Gaps = 110/443 (24%)
Query: 3 LDLDLFRTEKGGDPEKVRKNQKDRFKN-VELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+D++L R + P+ V++ R K V LVDKV+E D + R+ + + +N S
Sbjct: 2 IDINLIREK----PDYVKERLATRDKELVSLVDKVLELDKRRREIIKRLEALRSERNKLS 57
Query: 62 KVIGEKMKAKEPVGDSSTLPG-------------------------------NHLHPSVP 90
K IG K K D++ + N HPSVP
Sbjct: 58 KEIG---KLKREGKDTTEIQNRVKELKEEIDRLEEELRKVEEELKNTLLWIPNLPHPSVP 114
Query: 91 VSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
V +E +N VR G+ +K+ H ++ + +D + GA ++G R + G
Sbjct: 115 VGEDEKDNVEVRRWGEP---RKFDFEPKPHWEIGERLGILDFKRGAKLSGSRFTVIAGWG 171
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
L+ L+ + L +KGY + P ++ E++ QL +F+E+LYK
Sbjct: 172 ARLERALINFXLDLHTKKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKC---------- 221
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
E D+ YLI T+E P+ ++R+ L E +LPI + C+R+E
Sbjct: 222 -----ERDNLYLIPTAEVPLTNLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGII 276
Query: 254 --------DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLD 280
+L K + YRVV + +G L +AAK D
Sbjct: 277 RQHQFDKVELVKIVHPDTSYDELEKLVKDAEEVLQLLGLPYRVVELCTGDLGFSAAKTYD 336
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
+E WFP +RE+ SCSNC D+Q+RR R+ +K K FVH LN + A R +
Sbjct: 337 IEVWFPSQNKYREISSCSNCEDFQARRXNTRFKDSK--TGKNRFVHTLNGSGLAVGRTLA 394
Query: 341 AILETHQTETG-VRIPDCLRKFV 362
AILE +Q E G V +P+ LR +V
Sbjct: 395 AILENYQQEDGSVVVPEVLRDYV 417
>gi|423671048|ref|ZP_17646077.1| seryl-tRNA synthetase [Bacillus cereus VDM034]
gi|401294171|gb|EJR99801.1| seryl-tRNA synthetase [Bacillus cereus VDM034]
Length = 424
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 150/326 (46%), Gaps = 66/326 (20%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
H S P+ ED+N + RT G+ + + H DL T + +D E V G R F KG
Sbjct: 109 HESAPIGETEDDNVVARTWGEVKEFTYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKG 168
Query: 144 PAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 169 AGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI------- 221
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
E +D +LI T+E P+ +HRD + + LPIRY S+CFR E
Sbjct: 222 --------ESEDYFLIPTAEVPVTNMHRDEIVSKEQLPIRYAAFSSCFRSEAGSAGRDTR 273
Query: 254 -----------DLTK-------------------------SIAYRVVNIVSGALNHAAAK 277
+L K + YRV+++ +G L AAK
Sbjct: 274 GLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAK 333
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A R
Sbjct: 334 KYDIEVWIPSYGTYREISSCSNFEGFQARRANIRF--RREPNGKPEHVHTLNGSGLAIGR 391
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
+ AILE +Q E G + IP+ LR ++
Sbjct: 392 TVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|402554396|ref|YP_006595667.1| seryl-tRNA ligase [Bacillus cereus FRI-35]
gi|401795606|gb|AFQ09465.1| seryl-tRNA ligase [Bacillus cereus FRI-35]
Length = 424
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARTWGEV---KEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMIGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|283782854|ref|YP_003373608.1| serine--tRNA ligase [Gardnerella vaginalis 409-05]
gi|283442193|gb|ADB14659.1| serine--tRNA ligase [Gardnerella vaginalis 409-05]
Length = 428
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 196/439 (44%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVI-ENDLKWRQFR------------- 47
+LD+ R + V+++Q+ R ++VELVD+V+ +DL+ +
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLRSDDLRRTALKAFEEARAEQKAIG 56
Query: 48 ---------HKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA + K L SKV K ++++ D +T N + P E
Sbjct: 57 KKVATASAEEKAALIAETKELASKVAEYKAESEKATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSRAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL VR ++M + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR----ERMEDGGTRSVSTLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ E G + IP ++ ++
Sbjct: 397 NHQHEDGSIDIPKAMQAYM 415
>gi|379718026|ref|YP_005310157.1| SerS protein [Paenibacillus mucilaginosus 3016]
gi|378566698|gb|AFC27008.1| SerS [Paenibacillus mucilaginosus 3016]
Length = 426
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 192/442 (43%), Gaps = 100/442 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ L R GD ++V++ +R N++ +D+ D RQ + + +N+ S
Sbjct: 1 MLDVKLLR----GDLDRVKQGLSNRGANLDDLDRFTSLDTNRRQLLQEVEQLKNRRNVVS 56
Query: 62 KVIGEKMKAKEP----------VGDS-------------------STLPGNHLHPSVPVS 92
+ + + KAKE VGD +LP N SVPV
Sbjct: 57 QEVAQLKKAKENADHLIEEMKVVGDRIKALDEEIRVLEADLDSILMSLP-NMPQDSVPVG 115
Query: 93 NNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
++E+EN +R GD + H ++ +D +D E V G R F KG L+
Sbjct: 116 SSEEENVEIRRVGDVPAFGFEPKPHWEVAQALDILDFENAGKVTGSRFVFYKGLGARLER 175
Query: 151 GLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + + ++ GY + P + ++ + QL +F E+++K+ G
Sbjct: 176 ALINFMMDLHADQHGYEEMLPPQIVNRDSLTGTGQLPKFAEDVFKLEGT----------- 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D +LI T+E P+ HRD L LP ++ S CFR E
Sbjct: 225 ----DYFLIPTAEVPVTNYHRDDILSAEDLPKYFVAFSACFRSEAGSAGRDTRGLIRQHQ 280
Query: 254 ----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+L K + YRV+++ +G + +++K DLE W
Sbjct: 281 FNKIELVKLTLPEQSNDELEKLTADAEKVLQLLKLPYRVLSLCTGDIGFSSSKTYDLEVW 340
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P S +RE+ SCSN D+Q+RR +R+ + K K EFVH LN + A R + AILE
Sbjct: 341 LPNSNTYREISSCSNFEDFQARRANIRFRRDAKA--KPEFVHTLNGSGLALGRTVAAILE 398
Query: 345 THQTETG-VRIPDCLRKFVPAV 365
+Q E G V IP+ LR ++ V
Sbjct: 399 NYQQEDGSVLIPEVLRPYMGGV 420
>gi|34763854|ref|ZP_00144761.1| Seryl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886373|gb|EAA23641.1| Seryl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 424
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 192/447 (42%), Gaps = 108/447 (24%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
++L+L R + E +++ K+R NV++ D +E D K R+ + +N + +N
Sbjct: 3 IMLELKFMRE----NVEMLKEMLKNRNSNVDM-DTFVELDSKRREILSEVENLKRERNNV 57
Query: 61 SKVIGEKMKAK----------------------------EPVGDSSTLPGNHLHPSVPVS 92
S I K K E + D N H S P+
Sbjct: 58 SAEIANLKKEKKDANHLIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHSSTPIG 117
Query: 93 NNEDENGIVRTKGDTEVRKKY-----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+ED N +R G V KK+ SH D+ + +D E GA ++G R +G A
Sbjct: 118 PDEDYNLEIRKWG---VPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAAR 174
Query: 148 LQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + L +E+GYT TPF ++ EV + QL +F+E++YK
Sbjct: 175 LERALINFMLDVHTLEEGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTT---------- 224
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
DD YLI+TSE + +HR L ++ LP Y S CFR+E
Sbjct: 225 ------DDMYLISTSEITMTNIHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIR 278
Query: 254 --------------------DLTK------------SIAYRVVNIVSGALNHAAAKKLDL 281
+L K ++YRV+ + SG L +AAK DL
Sbjct: 279 LHQFNKVEMVKITDAESSYDELEKMVNNAETILQRLELSYRVIQLCSGDLGFSAAKTYDL 338
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W P +RE+ SCSNC +Q+RR+ ++Y ++ EF H LN + A R + A
Sbjct: 339 EVWLPSQNKYREISSCSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVA 394
Query: 342 ILETHQTETG-VRIPDCLRKFVPAVYV 367
I+E +Q E G IP L ++ V V
Sbjct: 395 IMENYQQEDGSFLIPKVLIPYMGGVDV 421
>gi|383806792|ref|ZP_09962353.1| seryl-tRNA synthetase [Candidatus Aquiluna sp. IMCC13023]
gi|383299222|gb|EIC91836.1| seryl-tRNA synthetase [Candidatus Aquiluna sp. IMCC13023]
Length = 421
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 136/297 (45%), Gaps = 65/297 (21%)
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFM 174
HV L +D +D E GA V+G R YFLKG L++ L+Q AL + E G+T L TP +
Sbjct: 137 HVSLGESLDVIDIERGAKVSGSRFYFLKGLGARLELALMQLALDQASEAGFTALITPTLV 196
Query: 175 RKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL 234
+ E+MQ L + E+Y + DD YL TSE + H L
Sbjct: 197 KPEIMQGTGFLGEHSAEVYYLPA---------------DDLYLTGTSEVALAGYHSGEIL 241
Query: 235 PEASLPIRYLGVSTCFRQEDLTKS------------------------------------ 258
+ + P+RY G STC+R+E +
Sbjct: 242 DDLTTPMRYAGWSTCYRREAGSHGKDTRGILRVHQFNKLEMFSYCKPEDAEAEHAKLLEW 301
Query: 259 ---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
+ YRV+++ +G L +AA+K D+EAW P G +REL S SNC YQ+RRL
Sbjct: 302 QEQMLQKCELPYRVIDVAAGDLGSSAARKYDIEAWVPTQGGYRELTSTSNCTTYQARRLN 361
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
RY + + K LN T ATTR + AILE HQ G V IP LR ++ V
Sbjct: 362 TRY---RDQDGKPAVAATLNGT-LATTRWLVAILENHQQADGSVLIPAALRGYLGGV 414
>gi|23466184|ref|NP_696787.1| seryl-tRNA synthetase [Bifidobacterium longum NCC2705]
gi|227546530|ref|ZP_03976579.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. longum ATCC
55813]
gi|239621528|ref|ZP_04664559.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|312133927|ref|YP_004001266.1| sers [Bifidobacterium longum subsp. longum BBMN68]
gi|322689877|ref|YP_004209611.1| seryl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
gi|322691817|ref|YP_004221387.1| seryl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
gi|419849248|ref|ZP_14372307.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 35B]
gi|419851907|ref|ZP_14374813.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 2-2B]
gi|30173167|sp|Q8G3W7.1|SYS_BIFLO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|23326924|gb|AAN25423.1| seryl-tRNA synthetase [Bifidobacterium longum NCC2705]
gi|227212847|gb|EEI80726.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239515403|gb|EEQ55270.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|291516425|emb|CBK70041.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
gi|311773221|gb|ADQ02709.1| SerS [Bifidobacterium longum subsp. longum BBMN68]
gi|320456673|dbj|BAJ67295.1| seryl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
gi|320461213|dbj|BAJ71833.1| seryl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
gi|386412187|gb|EIJ26869.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 2-2B]
gi|386412655|gb|EIJ27316.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 35B]
Length = 428
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 192/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
+LD+ R + V+++Q+ R ++VELVD+V+ +D R+
Sbjct: 1 MLDIQFIREH----TDIVKESQRKRGESVELVDEVLSSDTARREALKAFEEARAQQKEIG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA + K L KV K KA + +T N + P P E
Sbjct: 57 KKVASAPADEKAKLIAETKELSQKVSEYKSKADSAAEEYTTAMWKLSNIVEPEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G V G R YFL+G +Q+
Sbjct: 116 DDYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H + L + P+RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 ----------QEDLTK----------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QED K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYAKQEDSYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL +R ++M + V LN T ATTR + AI+E
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNIR----ERMEDGGTRPVSTLNGT-LATTRWLVAIME 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ + G + IP +R ++
Sbjct: 397 NHQQKDGSIEIPKAMRAYM 415
>gi|449017083|dbj|BAM80485.1| serine--tRNA ligase, chloroplast or mitochondrial [Cyanidioschyzon
merolae strain 10D]
Length = 546
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 154/332 (46%), Gaps = 71/332 (21%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAIVAGGRGY 139
N HP PV ED+ ++R G +S HV+L +D VD EA A VAG R Y
Sbjct: 206 NRTHPDAPV-GGEDQARLLRMAGKPRDFTDFSPKDHVELAQRLDIVDFEAAAKVAGARFY 264
Query: 140 FLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGK 198
FL+ L++ LV +A+ K G+ PL P +R+E V G
Sbjct: 265 FLRNAGAMLELALVNWAMQHLTGKHGFIPLIAPDLVREET----------------VWGC 308
Query: 199 GEKVGDSAPEKDELDDKYL--IATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--- 253
G + A + + D L T+E P+ + + L E LPI+ VS CFR+E
Sbjct: 309 GFQPRGEASQVYSVADTSLCLAGTAEIPLGGYYANEILDETQLPIKMAAVSHCFRREAGA 368
Query: 254 ------------DLTK------------------------------SIAYRVVNIVSGAL 271
TK + YRV+++ + L
Sbjct: 369 AGTETRGLYRVHQFTKVEMFVLSRPEESDRVHQELRSIEEELFDALGLHYRVLDMPTREL 428
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
+ A +K D+EAW PG AF E+ S SNC DYQ+RRL +RY ++++EK+ FVH LNAT
Sbjct: 429 GNPAYRKFDIEAWMPGRNAFGEISSASNCTDYQARRLNIRY--REQVSEKLRFVHTLNAT 486
Query: 332 ACATTRVICAILETHQTETG-VRIPDCLRKFV 362
ACA R+I +ILE Q + G V IP LR F+
Sbjct: 487 ACAVPRMIVSILENFQEKDGSVTIPQVLRPFL 518
>gi|421527228|ref|ZP_15973832.1| seryl-tRNA synthetase [Fusobacterium nucleatum ChDC F128]
gi|402256662|gb|EJU07140.1| seryl-tRNA synthetase [Fusobacterium nucleatum ChDC F128]
Length = 421
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 190/441 (43%), Gaps = 112/441 (25%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAK----- 71
E +++ K+R NV++ D +E D K R+ + +N + +N S I K K
Sbjct: 12 EMLKEMLKNRNSNVDM-DAFVELDTKRREVLSEVENLKRERNNASAEIANLKKEKKDANH 70
Query: 72 --EPVGDSS----------------------TLPGNHLHPSVPVSNNEDENGIVRTKGDT 107
E +G+ S +P N H S P+ +ED N +R G
Sbjct: 71 IIEKMGEVSAKIKDLDAELVEIDEKIKDIQLNIP-NVYHSSTPIGPDEDHNLEIRKWG-- 127
Query: 108 EVRKKY-----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYAL-SKWI 161
V KK+ SH D+ + +D E GA ++G R +G A L+ L+ + L + +
Sbjct: 128 -VPKKFDFEPKSHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALISFMLDTHTL 186
Query: 162 EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
E GYT TPF ++ EV + QL +F+E++YK DD YLI+TS
Sbjct: 187 EHGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTT----------------DDMYLISTS 230
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------------- 253
E + +HR L +A LP Y S CFR+E
Sbjct: 231 EITMTNIHRKEILEQAELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDA 290
Query: 254 -----DLTK------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVS 296
+L K + YRV+ + SG + +AAK DLE W P +RE+ S
Sbjct: 291 ESSYDELEKMVNNAETILQKLELPYRVIQLCSGDIGFSAAKTYDLEVWLPSQNKYREISS 350
Query: 297 CSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPD 356
CSNC +Q+RR+ ++Y ++ EF H LN + A R + AI+E +Q E G +
Sbjct: 351 CSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFL-- 404
Query: 357 CLRKFVPAVYVNEAGEIPFVK 377
VP V + G + +K
Sbjct: 405 -----VPKVLIPYMGGVDVIK 420
>gi|289572486|ref|ZP_06452713.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis K85]
gi|289536917|gb|EFD41495.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis K85]
Length = 419
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 187/434 (43%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR++Q R ++ LVD ++ D R AD+ + S
Sbjct: 1 MIDLKLLRE----NPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAAS 56
Query: 62 KVIGEKMKAKEP--------------------VGDSSTLPGNHLHPS------VPVSNNE 95
K +G + P V + HL S VP + E
Sbjct: 57 KSVGGASPEERPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVP-AGGE 115
Query: 96 DENGIVRTKGD-TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ G+ + + H++L + +D + GA V+G R YFL G LQ+GL+Q
Sbjct: 116 DDYAVLDVVGEPSYLENPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
AL ++ G+ P P +R EVM L EE+Y+V G G
Sbjct: 176 LALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDG--------------- 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H L + P+RY G S+CFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHSGEILDLSRGPLRYAGCSSCFRREAGSHGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ +G L +AA+K D EAW P G
Sbjct: 281 GFVYCTPADAEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQG 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
A+REL S SNC +Q+RRL RY + + K + LN T ATTR + AILE HQ
Sbjct: 341 AYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGT-LATTRWLVAILENHQRP 396
Query: 350 TG-VRIPDCLRKFV 362
G VR+PD L FV
Sbjct: 397 DGSVRVPDALVPFV 410
>gi|88770706|gb|ABD51956.1| serine tRNA ligase [Rhodomonas salina]
Length = 210
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 114/200 (57%), Gaps = 50/200 (25%)
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
E +KYLIATSEQPI A H + + LP++Y G STCFR+E
Sbjct: 5 EGGEKYLIATSEQPISAFHTNEKITRNKLPLKYSGFSTCFRKESGSHGKDSAGIFRVHQF 64
Query: 255 -------LTKS------------------------IAYRVVNIVSGALNHAAAKKLDLEA 283
LT S I Y V+I SGA+N++A++K+DL
Sbjct: 65 EKIEQFILTDSKGTESWALFEELLGNTQEFYSSLKIPYICVDIPSGAINNSASRKIDLLG 124
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVR-YGQTKKMNEKIEFVHMLNATACATTRVICAI 342
WFP SG+++ELVSCSNC D+QS+R+ + + ++K N K FVHMLN+T CATTRVIC I
Sbjct: 125 WFPSSGSYKELVSCSNCTDFQSKRMNIELFPASEKFNGK--FVHMLNSTLCATTRVICCI 182
Query: 343 LETHQTETGVRIPDCLRKFV 362
LE +QT G++IPD +R +V
Sbjct: 183 LENNQTNLGIKIPDVIRSYV 202
>gi|163938025|ref|YP_001642909.1| seryl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|229009527|ref|ZP_04166756.1| Seryl-tRNA synthetase [Bacillus mycoides DSM 2048]
gi|229053863|ref|ZP_04195300.1| Seryl-tRNA synthetase [Bacillus cereus AH603]
gi|229131024|ref|ZP_04259940.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|229165006|ref|ZP_04292804.1| Seryl-tRNA synthetase [Bacillus cereus AH621]
gi|423370810|ref|ZP_17348212.1| seryl-tRNA synthetase [Bacillus cereus VD142]
gi|423491067|ref|ZP_17467716.1| seryl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|423496372|ref|ZP_17473016.1| seryl-tRNA synthetase [Bacillus cereus CER057]
gi|423496834|ref|ZP_17473451.1| seryl-tRNA synthetase [Bacillus cereus CER074]
gi|423513049|ref|ZP_17489579.1| seryl-tRNA synthetase [Bacillus cereus HuA2-1]
gi|423520157|ref|ZP_17496638.1| seryl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|423526426|ref|ZP_17502874.1| seryl-tRNA synthetase [Bacillus cereus HuA4-10]
gi|423556986|ref|ZP_17533289.1| seryl-tRNA synthetase [Bacillus cereus MC67]
gi|423597191|ref|ZP_17573193.1| seryl-tRNA synthetase [Bacillus cereus VD048]
gi|423603241|ref|ZP_17579237.1| seryl-tRNA synthetase [Bacillus cereus VD078]
gi|423666128|ref|ZP_17641228.1| seryl-tRNA synthetase [Bacillus cereus VDM022]
gi|423672729|ref|ZP_17647668.1| seryl-tRNA synthetase [Bacillus cereus VDM062]
gi|163860222|gb|ABY41281.1| seryl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|228618458|gb|EEK75485.1| Seryl-tRNA synthetase [Bacillus cereus AH621]
gi|228652436|gb|EEL08357.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|228721473|gb|EEL72990.1| Seryl-tRNA synthetase [Bacillus cereus AH603]
gi|228751738|gb|EEM01535.1| Seryl-tRNA synthetase [Bacillus mycoides DSM 2048]
gi|401073267|gb|EJP81698.1| seryl-tRNA synthetase [Bacillus cereus VD142]
gi|401149176|gb|EJQ56653.1| seryl-tRNA synthetase [Bacillus cereus CER057]
gi|401156447|gb|EJQ63853.1| seryl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|401163248|gb|EJQ70596.1| seryl-tRNA synthetase [Bacillus cereus HuA4-10]
gi|401163910|gb|EJQ71253.1| seryl-tRNA synthetase [Bacillus cereus CER074]
gi|401193975|gb|EJR00975.1| seryl-tRNA synthetase [Bacillus cereus MC67]
gi|401217188|gb|EJR23884.1| seryl-tRNA synthetase [Bacillus cereus VD048]
gi|401222271|gb|EJR28866.1| seryl-tRNA synthetase [Bacillus cereus VD078]
gi|401286643|gb|EJR92460.1| seryl-tRNA synthetase [Bacillus cereus VDM022]
gi|401311392|gb|EJS16696.1| seryl-tRNA synthetase [Bacillus cereus VDM062]
gi|402427103|gb|EJV59216.1| seryl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|402446330|gb|EJV78191.1| seryl-tRNA synthetase [Bacillus cereus HuA2-1]
Length = 424
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 150/326 (46%), Gaps = 66/326 (20%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
H S P+ ED+N + RT G+ + + H DL T + +D E V G R F KG
Sbjct: 109 HESAPIGETEDDNVVARTWGEVKEFTYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKG 168
Query: 144 PAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 169 AGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI------- 221
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
E +D +LI T+E P+ +HRD + + LPIRY S+CFR E
Sbjct: 222 --------ESEDYFLIPTAEVPVTNMHRDEIVSKEQLPIRYAAFSSCFRSEAGSAGRDTR 273
Query: 254 -----------DLTK-------------------------SIAYRVVNIVSGALNHAAAK 277
+L K + YRV+++ +G L AAK
Sbjct: 274 GLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAK 333
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A R
Sbjct: 334 KYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLAIGR 391
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
+ AILE +Q E G + IP+ LR ++
Sbjct: 392 TVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|404329042|ref|ZP_10969490.1| seryl-tRNA ligase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 429
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 193/443 (43%), Gaps = 107/443 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ R + ++++K DR +++ ++ E D + R K + +N S
Sbjct: 1 MLDMKFLRE----NYQEIKKRMADRGEDLGDFERFPELDEQRRDLISKTEVLKARRNEVS 56
Query: 62 KVIGEKMKAKEPVGDSST-----------LPG-----------------NHLHPSVPVSN 93
+ I + +AKE D T L G N H SVPV
Sbjct: 57 EQIAARKRAKEDAADLITAMRDESAKIKELDGALNRIEDELHQVMLSIPNVPHESVPVGK 116
Query: 94 NEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
+E++N +R G+ KK++ H D+ T +D +D E A V G R F KG V L
Sbjct: 117 DENDNKPIRFWGEP---KKFTFEPKPHWDIATHLDILDFERAAKVTGSRFVFYKGLGVRL 173
Query: 149 QVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
+ L+ + L E+ YT + P+ + ++ M QL +F+E+ +K+
Sbjct: 174 ERALISFMLDLHEEEQDYTIMMPPYMVNRDSMTGTGQLPKFEEDAFKID----------- 222
Query: 208 EKDELDDK--YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
DDK +LI T+E P+ +RD L LPI Y S CFR E
Sbjct: 223 -----DDKGYFLIPTAEVPVTNYYRDEILNGDDLPIAYAAYSACFRSEAGSAGRDTRGII 277
Query: 254 --------DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLD 280
+L + ++ YRVV+I +G L AAKK D
Sbjct: 278 RQHQFNKVELVRFVKPEDSYDQLEKLTGDAEEVLRRLNLPYRVVSICTGDLGFTAAKKYD 337
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
LE W P +RE+ SCSN +Q+RR +R+ + K K E+VH LN + A R +
Sbjct: 338 LEVWIPSQNTYREISSCSNFEAFQARRANIRFRRAPKA--KPEYVHTLNGSGLAVGRTVA 395
Query: 341 AILETHQTETG-VRIPDCLRKFV 362
AILE +Q E G V IP+ LR ++
Sbjct: 396 AILENYQQEDGTVIIPEALRPYM 418
>gi|336420332|ref|ZP_08600566.1| serine--tRNA ligase [Fusobacterium sp. 11_3_2]
gi|336161099|gb|EGN64110.1| serine--tRNA ligase [Fusobacterium sp. 11_3_2]
Length = 421
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 191/441 (43%), Gaps = 112/441 (25%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAK----- 71
E +++ K+R NV++ D +E D K R+ + +N + +N S I K K
Sbjct: 12 EMLKEMLKNRNSNVDM-DAFVELDSKRREVLSEVENLKRERNNVSAEIANLKKEKKDASH 70
Query: 72 --EPVGDSST----------------------LPGNHLHPSVPVSNNEDENGIVRTKGDT 107
E +G ST +P N HPS P+ +E+ N +R G+
Sbjct: 71 LIEKMGGVSTKIKELDNELVEIDEKIKDIQLNIP-NVYHPSTPIGPDENYNLEIRKWGEP 129
Query: 108 EVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS-KWI 161
KK+S H D+ + +D E GA ++G R +G A L+ L+ + L +
Sbjct: 130 ---KKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALINFMLDVHTL 186
Query: 162 EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
E+GYT TPF ++ EV + QL +F+E++YK DD YLI+TS
Sbjct: 187 EEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTT----------------DDMYLISTS 230
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------------- 253
E + +HR L ++ LP Y S CFR+E
Sbjct: 231 EITMTNIHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDA 290
Query: 254 -----DLTK------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVS 296
+L K + YRV+ + SG L +AAK DLE W P +RE+ S
Sbjct: 291 ESSYDELEKMVKNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISS 350
Query: 297 CSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPD 356
CSNC +Q+RR+ ++Y ++ EF H LN + A R + AI+E +Q E G +
Sbjct: 351 CSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFL-- 404
Query: 357 CLRKFVPAVYVNEAGEIPFVK 377
VP V + G + +K
Sbjct: 405 -----VPKVLIPYMGGVDVIK 420
>gi|344996947|ref|YP_004799290.1| seryl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343965166|gb|AEM74313.1| Seryl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 420
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 193/439 (43%), Gaps = 103/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL R +PEKV+ R K++ + ++E D K R+ + ++ +N S
Sbjct: 1 MLDLKYIR----ANPEKVQGGLSKRNKDISIA-PILELDEKRRKLLAEVESLKALQNQKS 55
Query: 62 KVI----------GEKMKAKEPVGDSS-------------------TLPGNHLHPSVPVS 92
K + E M + + D T+P N H SVPV
Sbjct: 56 KEVPKLKKEGKDVTELMNELKELSDKIKELDSRVKEVEDEIEKILLTIP-NIPHESVPVG 114
Query: 93 NNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
++ EN VR GD V + H ++ + +D E + V+G R F +G L+
Sbjct: 115 KDDTENVEVRRWGDVRVPDFEVKPHWEIGMSLGILDFERASKVSGSRFTFYRGLGARLER 174
Query: 151 GLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + L IEK GYT ++ PF + ++ M QL +F+E+ +K
Sbjct: 175 ALINFMLDLHIEKHGYTEIFPPFLVARKSMIGTGQLPKFEEDAFKTT------------- 221
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------ 251
DD +LI T+E P+ HR+ L E LPI+Y+ S CFR
Sbjct: 222 ---DDYFLIPTAEVPVTNYHREEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQ 278
Query: 252 -------------------------QEDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAW 284
ED+ K + YRVV + SG L ++AK D+E W
Sbjct: 279 FNKVELVKFAKPEDSYDELEKLTADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVW 338
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P G + E+ SCSN YQ+RR +R+ ++ + K+++VH LN + A R + AILE
Sbjct: 339 MPSYGRYVEISSCSNFESYQARRANIRF---RRKDGKLDYVHTLNGSGLAVGRTVAAILE 395
Query: 345 THQTETG-VRIPDCLRKFV 362
Q + G V +P+ LRK++
Sbjct: 396 NFQQKDGTVVVPEVLRKYM 414
>gi|386853634|ref|YP_006202919.1| SerS protein [Borrelia garinii BgVir]
gi|365193668|gb|AEW68566.1| SerS [Borrelia garinii BgVir]
Length = 425
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 162/340 (47%), Gaps = 77/340 (22%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N L P VP+ N+E++N ++ G + K+ H++L +D +D + V+G +
Sbjct: 104 NILSPDVPIGNSEEDNFEIKKVG---IVPKFDFKPKDHLELGRDLDLLDFDRAREVSGSK 160
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEE-LYKVI 196
Y+LK AV L++ L+ ++L+K EKG+ TP R+ ++ + + DE +YK+
Sbjct: 161 FYYLKNEAVFLEIALINFSLNKLREKGFDVFITPDVAREFIVDGIGFNPRGDESNIYKI- 219
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--- 253
E DKYL+ TSE + + + + + +LPI+ G S CFR+E
Sbjct: 220 --------------ESTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAGA 264
Query: 254 --DLTKS----------------------------------------IAYRVVNIVSGAL 271
L+K I YRV+NI S L
Sbjct: 265 YGQLSKGLYRVHQFSKVEMFCFCKAEESQVIHDEFLSIQEQIFTELEIPYRVLNICSFDL 324
Query: 272 NHAAAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
A KK D+EAW PG G++ E+ S SNC DYQSRRL +RY N +F HM+
Sbjct: 325 GSPAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMV 381
Query: 329 NATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
N T ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 382 NGTVIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDYI 421
>gi|377561501|ref|ZP_09790952.1| seryl-tRNA synthetase [Gordonia otitidis NBRC 100426]
gi|377521345|dbj|GAB36117.1| seryl-tRNA synthetase [Gordonia otitidis NBRC 100426]
Length = 426
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 185/434 (42%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
V+DL + R DP+ VR +Q+ R ++ LVD +++ D R +AD+ +
Sbjct: 4 VIDLKIVRD----DPDLVRASQRVRGEDPGLVDVLLDADTARRSAIVEADSLRSEQKALG 59
Query: 62 KVIG------------------EKMK--------AKEPVGDSSTLPGNHLHPSVPVSNNE 95
K +G E++K A + ++ N + + P E
Sbjct: 60 KQVGKASGDEKAALLAKGKELAEQVKSAVARQNEADDAASNAQRAISNIVEGAPP--GGE 117
Query: 96 DENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ G E+ H++L + +D E GA V+G R YFL G LQ+GL+
Sbjct: 118 DDYVVLEHVGQPREIENPRDHLELGESLGLIDMERGAKVSGSRFYFLTGQGAMLQLGLLT 177
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A K G+T + P +R EVM L +E+Y + D+ DD
Sbjct: 178 MAAQKATANGFTLMIPPVLVRPEVMGGTGFLGAHADEVYHL--------------DKDDD 223
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H D + + P RY G STCFR+E +
Sbjct: 224 LYLVGTSEVPLAGYHMDEIIDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVE 283
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ G L +AA+K D EAW P
Sbjct: 284 GFVYCKPEDAAAEHQKLLGWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQQ 343
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL +RY + K + LN T ATTR I AILE HQ
Sbjct: 344 TYRELTSTSNCTTFQARRLSIRY---RDEAGKPQVAATLNGT-LATTRWIVAILENHQQA 399
Query: 350 TG-VRIPDCLRKFV 362
G V +P+ L ++V
Sbjct: 400 DGSVVLPEELARYV 413
>gi|154250193|ref|YP_001411018.1| seryl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
gi|171769398|sp|A7HN78.1|SYS_FERNB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|154154129|gb|ABS61361.1| seryl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
Length = 426
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 192/441 (43%), Gaps = 104/441 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP+ + K R + +++D+++ D +WR + +N +N S
Sbjct: 1 MIDLKLLRK----DPQHFYEALKKRNYSTDIIDEIVNLDKEWRNQLNIVNNLKAKRNELS 56
Query: 62 KVI------GEKMKAKEPVGDSSTLP------------------------GNHLHPSVPV 91
K++ G+ +A+E + +S + N H SVPV
Sbjct: 57 KLVARYKAEGKNQEAEEIIAESKKIGEEIAQYEGKQKELEEKMYNLALYIPNPPHESVPV 116
Query: 92 SNNEDENGIVRTKGDTEVRK----KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+E EN +R G E RK +H DL + +D + G+ ++G R + G
Sbjct: 117 GKDETENVEIRRWG--EPRKFDFEPKAHWDLGPELGMLDFDRGSKLSGSRFTVMFGAIAK 174
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L+ + Q+ L + GY + P +++E + QL +F EELY
Sbjct: 175 LERAIAQFMLDVHTKNGYIEVNVPHLVKRETITATGQLPKFSEELYTC------------ 222
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ--------------- 252
E DD +LI T+E + A+H D L E LP +Y + C+R+
Sbjct: 223 ---ERDDLFLIPTAEVSLAALHIDEILEENKLPKKYTAFTPCYRREAGSYGKDVRGLIRQ 279
Query: 253 ------------------EDLTK------------SIAYRVVNIVSGALNHAAAKKLDLE 282
EDL + + YRVV + +G L AAAK D+E
Sbjct: 280 HQFEKVELVWYTTPERSFEDLEQLTQDAERILQLLGLPYRVVTLCTGDLGFAAAKTYDIE 339
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
W P +++E+ SCSN D+Q+RR +RY + + K+ +VH LN + A R + AI
Sbjct: 340 VWLPSYNSYKEISSCSNVTDFQARRGNIRY---RAKDGKLNYVHTLNGSGLAIGRTLVAI 396
Query: 343 LETHQTETG-VRIPDCLRKFV 362
+E +Q G + IP+ LR ++
Sbjct: 397 MENYQNPDGTITIPEVLRPYM 417
>gi|306837119|ref|ZP_07470056.1| serine--tRNA ligase [Corynebacterium accolens ATCC 49726]
gi|304566967|gb|EFM42595.1| serine--tRNA ligase [Corynebacterium accolens ATCC 49726]
Length = 418
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 186/438 (42%), Gaps = 105/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR +Q R ++ LVD+++ D K R KAD +
Sbjct: 1 MIDLKLLRE----NPDVVRASQVTRGEDPSLVDQLLAADEKRRLAIQKADEVRSQQKSLG 56
Query: 62 KVIGEKMKAKEPVGDSSTLPG-NHLHPSVPV---------------------------SN 93
K IG+ + P + L G + L V +
Sbjct: 57 KKIGQASPEERP----ALLEGADELKAKVKEAEEARSAAEATVEELQYKIDNVVEGAPAG 112
Query: 94 NEDENGIVRTKGDT---EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
ED+ +V G+ + K H++L + +D + GA V G R Y+L G LQ+
Sbjct: 113 GEDDFVLVEEVGEIPHFDFEPK-DHLELGESLGLIDVKRGAKVGGARFYYLTGDGAFLQL 171
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
G++ A K E G+ + P +R E+M L Q +E+Y +
Sbjct: 172 GMLMLAAQKAREAGFQLMIPPVLVRPEIMSGTGFLGQHSDEIYYLPA------------- 218
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + H+D + ++ P++Y G S+CFR+E
Sbjct: 219 --DDRYLVGTSEVALAGYHKDEIIDLSNGPLQYAGWSSCFRREAGSHGKDTRGILRVHQF 276
Query: 254 ----------------------DLTKS------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D+ K + YR ++I G L +AA+K D EAW
Sbjct: 277 DKLEMFVYCKPEDAEDMHQKLLDMEKEMLAAMELPYRTIDIAGGDLGSSAARKFDNEAWV 336
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC +Q+RRL RY + N K + LN T ATTR I AILE
Sbjct: 337 PTQGTYRELTSTSNCTTFQARRLSTRY---RDENGKTQVAATLNGT-LATTRWIVAILEN 392
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G V +P+ LR FV
Sbjct: 393 HQQADGSVVVPEALRPFV 410
>gi|118620021|ref|YP_908353.1| seryl-tRNA synthetase [Mycobacterium ulcerans Agy99]
gi|166222751|sp|A0PX13.1|SYS_MYCUA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|118572131|gb|ABL06882.1| seryl-tRNA synthetase SerS [Mycobacterium ulcerans Agy99]
Length = 419
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 186/433 (42%), Gaps = 95/433 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R DP+ VR++Q R ++ LVD ++ D R AD+ + S
Sbjct: 1 MIDLKLLRE----DPDVVRRSQLSRGEDPALVDALLTADTARRTAISTADSLRAEQKAAS 56
Query: 62 KVIG------------------EKMKAKEPVGDSSTLPGNHLHPSVP-------VSNNED 96
K +G E++KA E + H ++P + ED
Sbjct: 57 KSVGGASPEERPALLQRAKDLAEQVKAAEATQSETETAFTAAHMAIPNVILDGVPAGGED 116
Query: 97 ENGIVRTKGDTE-VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
+ ++ G+ + H++L + +D GA VAG R YFL G LQ+GL+Q
Sbjct: 117 DYAVLDVVGEPRALDNPKDHLELGESLGLIDMARGAKVAGSRFYFLTGQGALLQLGLLQL 176
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
AL ++ G+ P+ P +R EVM L +E+Y++ E DD
Sbjct: 177 ALRLAVDNGFIPMIPPVLVRPEVMAGTGFLGAHADEVYRL---------------EADDL 221
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------------- 258
YL+ TSE P+ H D + + P+RY G S+CFR+E +
Sbjct: 222 YLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEG 281
Query: 259 ----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
+ YRV+++ +G L +AA+K D EAW P G
Sbjct: 282 FVYCAPADAEAEHQRLLAWQREMLAQIEVPYRVIDVAAGDLGASAARKFDCEAWVPTQGT 341
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL RY + N K + LN T TTR + +ILE HQ
Sbjct: 342 YRELTSTSNCTTFQARRLATRY---RDANGKPQIAATLNGT-LGTTRWLVSILENHQQPD 397
Query: 351 G-VRIPDCLRKFV 362
G R+P L FV
Sbjct: 398 GSARVPAALVGFV 410
>gi|422489715|ref|ZP_16566042.1| seryl-tRNA synthetase [Propionibacterium acnes HL020PA1]
gi|328757719|gb|EGF71335.1| seryl-tRNA synthetase [Propionibacterium acnes HL020PA1]
Length = 424
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 189/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF-------- 53
++D L RT DP+ VR++Q R ++ +VD V+ D R+ DN
Sbjct: 1 MIDPKLLRT----DPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHDNLRAEQKGLG 56
Query: 54 ---------------NKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
++ K + +V K A E + L GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E + H+++ + +D E G ++G R Y L G L+
Sbjct: 116 DEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 --DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 254 --------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D + I ++V+++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +R+ + + +E + LN T CA TR+I +LE
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VRIP+ LR ++
Sbjct: 397 HQQADGSVRIPEALRPYL 414
>gi|242069129|ref|XP_002449841.1| hypothetical protein SORBIDRAFT_05g024270 [Sorghum bicolor]
gi|241935684|gb|EES08829.1| hypothetical protein SORBIDRAFT_05g024270 [Sorghum bicolor]
Length = 514
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 173/355 (48%), Gaps = 81/355 (22%)
Query: 76 DSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAI 132
++ ++P N HP VPV +E+ ++R + ++ ++ H+ L +D D +A A
Sbjct: 172 EAQSIP-NTTHPDVPVGG--EESSVLRKEVGSQRSFNFTIKDHLQLGKELDLFDFDAAAE 228
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEE 191
V+G + Y+LK AV L++ LV +A+S+ +KG+TPL TP +R V+++ Q + +
Sbjct: 229 VSGSKFYYLKNEAVLLEMALVNWAISEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQ 288
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
+Y + E D+ LI T+E P+ +H DS L E++LP++Y+ S CFR
Sbjct: 289 VYSI---------------EDSDQCLIGTAEIPVGGIHMDSILAESALPLKYVAYSHCFR 333
Query: 252 -------------------------------------------QEDLTKSIA--YRVVNI 266
+EDL S+ ++ +++
Sbjct: 334 TEAGAAGAATRGLYRVHQFSKVEMFIFCRPDESDKLHEELITIEEDLYASLGLHFKTLDM 393
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTKKMNEK- 321
+G L A +K D+EAW PG + E+ S SNC DYQSRRL +RY + N K
Sbjct: 394 ATGDLGAPAYRKFDIEAWMPGLERYGEISSASNCTDYQSRRLGIRYRPSPSEPPSTNTKK 453
Query: 322 --------IEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
+FVH LNATA A R+I ILE Q + G + +P+ LR ++ + V
Sbjct: 454 GKGAGSGPTQFVHTLNATAVAVPRLIVCILENFQQDDGSIVVPEPLRPYMGGLEV 508
>gi|404260194|ref|ZP_10963491.1| serine--tRNA ligase [Gordonia namibiensis NBRC 108229]
gi|403401305|dbj|GAC01901.1| serine--tRNA ligase [Gordonia namibiensis NBRC 108229]
Length = 419
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 180/433 (41%), Gaps = 94/433 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELV-----------------------DKVIE 38
++DL + R DP+ VR +Q+ R ++ LV K +
Sbjct: 1 MIDLKIVRD----DPDLVRASQRTRGEDPGLVDALLDADAARRAAIVDADTLRSEQKALG 56
Query: 39 NDLKWRQFRHKADNFNKFKNLCSKV---IGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNE 95
+ Q K K K L +V + + +A E + N + P P +
Sbjct: 57 KQVGKAQGDEKQALLAKGKELAEQVKAAVARQSEADEAAAKAHRAISNIVAPEAPAGGED 116
Query: 96 DENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
D + E+ H++L + +D E GA V+G R YFL G LQ+GL+
Sbjct: 117 DYVVLEHVGEPREIENPKDHLELGESLGLLDMERGAKVSGSRFYFLTGQGAFLQLGLLNM 176
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
A K G+T + P +R EVM+ L +E+Y + D+ DD
Sbjct: 177 AAQKAAANGFTLMVPPVLVRPEVMEGTGFLGAHADEVYHL--------------DKDDDL 222
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------- 253
YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 223 YLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEG 282
Query: 254 ---------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
D+ +I YRV+++ G L +AA+K D EAW P
Sbjct: 283 FIYCKPEDAEAEHQRLLGWEKDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQNT 342
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL +RY + N K + LN T ATTR + AILE HQ
Sbjct: 343 YRELTSTSNCTTFQARRLSIRY---RDENGKPQTAATLNGT-LATTRWLVAILENHQQPD 398
Query: 351 G-VRIPDCLRKFV 362
G V++P L KFV
Sbjct: 399 GSVKLPPELAKFV 411
>gi|229015418|ref|ZP_04172422.1| Seryl-tRNA synthetase [Bacillus cereus AH1273]
gi|229021624|ref|ZP_04178212.1| Seryl-tRNA synthetase [Bacillus cereus AH1272]
gi|423388213|ref|ZP_17365439.1| seryl-tRNA synthetase [Bacillus cereus BAG1X1-3]
gi|228739670|gb|EEL90078.1| Seryl-tRNA synthetase [Bacillus cereus AH1272]
gi|228745876|gb|EEL95874.1| Seryl-tRNA synthetase [Bacillus cereus AH1273]
gi|401643631|gb|EJS61326.1| seryl-tRNA synthetase [Bacillus cereus BAG1X1-3]
Length = 424
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 151/329 (45%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + R G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARNWGEV---KEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILSKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|415717786|ref|ZP_11467021.1| seryl-tRNA synthetase [Gardnerella vaginalis 1500E]
gi|415728884|ref|ZP_11472222.1| seryl-tRNA synthetase [Gardnerella vaginalis 6119V5]
gi|388060669|gb|EIK83353.1| seryl-tRNA synthetase [Gardnerella vaginalis 1500E]
gi|388064884|gb|EIK87399.1| seryl-tRNA synthetase [Gardnerella vaginalis 6119V5]
Length = 428
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 194/439 (44%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
+LD+ R + V+++Q+ R ++VELVD+V+ ND R
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLRNDDLRRDALKAFEAARAEQKAIG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA + K L KV K+++++ D +T N + P E
Sbjct: 57 KKVASAPAEEKAALIAETKELAQKVAEYKVESEKATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSRAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL VR ++M + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR----ERMEDGGTRPVSTLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ E G + IP ++ ++
Sbjct: 397 NHQHEDGSIDIPKAMQAYM 415
>gi|452943569|ref|YP_007499734.1| seryl-tRNA synthetase [Hydrogenobaculum sp. HO]
gi|452881987|gb|AGG14691.1| seryl-tRNA synthetase [Hydrogenobaculum sp. HO]
Length = 421
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 154/336 (45%), Gaps = 72/336 (21%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGR 137
N LH SVP +E++N ++ G D E++ H DL + +D + A ++G R
Sbjct: 107 NLLHESVPYGKDENDNVEIKRWGEIPKFDFEIK---DHADLGVLRGFIDFDQAAAISGSR 163
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
LKGP L+ L+ + L + GY + P ++ + + QL +F EELY V
Sbjct: 164 FSILKGPLAKLERALINFMLEVNAKNGYQEMTVPHLVKPQALVGTGQLPKFQEELYYV-- 221
Query: 198 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---- 253
KD DD YLI T+E P+ V +D+ L E LPI + C+R+E
Sbjct: 222 -----------KD--DDLYLIPTAEVPLVNVFKDTILKEDDLPINLTAYTPCYRREAGSH 268
Query: 254 ----------------DLTK-------------------------SIAYRVVNIVSGALN 272
+L K + YRVV + SG +
Sbjct: 269 GKDVKGLIRQHQFDKVELVKIVHPDNSYDELEKLLSNAEEILQLLELPYRVVALCSGDIG 328
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
+A+K D+E W P +RE+ SCSNC D+Q+RR +R+ K K FVH LN ++
Sbjct: 329 FSASKTYDIEVWIPSQNKYREISSCSNCEDFQARRANIRF---KDKTGKNRFVHTLNGSS 385
Query: 333 CATTRVICAILETHQT-ETGVRIPDCLRKFVPAVYV 367
A R + AI+E +QT + +RIP L+ ++ Y+
Sbjct: 386 LAVGRTLVAIMENYQTKDNRIRIPKVLKDYIKEEYI 421
>gi|337744377|ref|YP_004638539.1| SerS protein [Paenibacillus mucilaginosus KNP414]
gi|336295566|gb|AEI38669.1| SerS [Paenibacillus mucilaginosus KNP414]
Length = 426
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 192/442 (43%), Gaps = 100/442 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ L R GD ++V++ +R N++ +D+ D RQ + + +N+ S
Sbjct: 1 MLDVKLLR----GDLDRVKQGLSNRGANLDDLDRFTSLDTNRRQLLQEVEQLKNRRNVVS 56
Query: 62 KVIGEKMKAKEP----------VGDS-------------------STLPGNHLHPSVPVS 92
+ + + KAKE VGD +LP N SVPV
Sbjct: 57 QEVAQLKKAKENADHLIEEMKVVGDRIKALDEEIRVLEADLDSILMSLP-NLPQDSVPVG 115
Query: 93 NNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
++E+EN +R GD + H ++ +D +D E V G R F KG L+
Sbjct: 116 SSEEENVEIRRVGDVPAFGFEPKPHWEVAQALDILDFENAGKVTGSRFVFYKGLGARLER 175
Query: 151 GLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + + ++ GY + P + ++ + QL +F E+++K+ G
Sbjct: 176 ALINFMMDLHADQHGYEEMLPPQIVNRDSLTGTGQLPKFAEDVFKLEGT----------- 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D +LI T+E P+ HRD L LP ++ S CFR E
Sbjct: 225 ----DYFLIPTAEVPVTNYHRDDILSAEDLPKYFVAFSACFRSEAGSAGRDTRGLIRQHQ 280
Query: 254 ----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+L K + YRV+++ +G + +++K DLE W
Sbjct: 281 FNKIELVKLTLPEQSNDELEKLTADAEKVLQLLKLPYRVLSLCTGDIGFSSSKTYDLEVW 340
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P S +RE+ SCSN D+Q+RR +R+ + K K EFVH LN + A R + AILE
Sbjct: 341 LPNSNTYREISSCSNFEDFQARRANIRFRRDAKA--KPEFVHTLNGSGLALGRTVAAILE 398
Query: 345 THQTETG-VRIPDCLRKFVPAV 365
+Q E G V IP+ LR ++ V
Sbjct: 399 NYQQEDGSVLIPEVLRPYMGGV 420
>gi|413963316|ref|ZP_11402543.1| seryl-tRNA ligase [Burkholderia sp. SJ98]
gi|413929148|gb|EKS68436.1| seryl-tRNA ligase [Burkholderia sp. SJ98]
Length = 432
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 159/336 (47%), Gaps = 69/336 (20%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIV 133
T+P N H SVPV N+E +N VR G D EV+ HVD+ + G+D E GA +
Sbjct: 102 TVP-NLPHESVPVGNDETQNVEVRRWGAPRSFDFEVK---DHVDVGAPL-GLDFETGAKL 156
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
+G R L+GP L L Q+ + E+ GYT YTP+ + E++ QL +F +++
Sbjct: 157 SGARFTLLRGPIARLHRALAQFMIDTHTEQHGYTEAYTPYIVNPEILYGTGQLPKFADDM 216
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
++V EK GD + +YLI+TSE + RDS L +LP++ S CFR
Sbjct: 217 FRV----EKGGD-----ENTVTQYLISTSEISLTNTVRDSILEADALPVKLTAHSPCFRS 267
Query: 253 E--------------------DLTKSIA-------------------------YRVVNIV 267
E ++ + +A YRV+ +
Sbjct: 268 EAGSYGRDTRGLIRQHQFDKVEMVQIVAPEHSYAALDEMVGQAETILQKLELPYRVITLC 327
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G + +AAK DLE W P +RE+ SCSN +Q+RR+ R+ + K EFVH
Sbjct: 328 TGDMGFSAAKTFDLEVWLPAQNTYREISSCSNTEAFQARRMQARF---RNAQGKPEFVHT 384
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R + A+LE Q G V IP LR ++
Sbjct: 385 LNGSGLAVGRTLVAVLENFQNADGSVTIPTVLRPYM 420
>gi|422479060|ref|ZP_16555471.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA1]
gi|313826917|gb|EFS64631.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA1]
Length = 424
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 190/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
++D L RT DP+ VR++Q R ++ +VD V+ D R+
Sbjct: 1 MIDPKLLRT----DPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ ++ K + +V K A E + L GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E + H+++ + +D E G ++G R Y L G L+
Sbjct: 116 DEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
DD+YL+ TSE + A H D L +A LP RY+ S C+R
Sbjct: 223 --DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 252 ------------------------QEDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
+ED + I ++V+++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPQEAEAWHEKLLSFEEDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +R+ + + +E + LN T CA TR+I +LE
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VRIP+ LR ++
Sbjct: 397 HQQADGSVRIPEALRPYL 414
>gi|312128024|ref|YP_003992898.1| seryl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311778043|gb|ADQ07529.1| seryl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 420
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 196/442 (44%), Gaps = 109/442 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL R+ +PEKV++ R K++ + ++E D + R+ + ++ +N S
Sbjct: 1 MLDLKYIRS----NPEKVQEGLSKRNKDISIA-PILELDERRRKLLAEVESLKALQNQKS 55
Query: 62 KVIGEKMKAKEPVGDSS-----------------------------TLPGNHLHPSVPVS 92
K + + K + V D T+P N H SVPV
Sbjct: 56 KEVPKLKKEGKDVTDLMNELKELSDKIKELDSKVKEVEDEIEKILLTIP-NIPHESVPVG 114
Query: 93 NNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
++ EN VR G D E++ H ++ + +D E + V+G R F +G
Sbjct: 115 KDDTENVEVRRWGEVREPDFEIK---PHWEIGVNLGILDFERASKVSGSRFTFYRGLGAR 171
Query: 148 LQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + L IEK GYT L+ PF + ++ M QL +F+E+ +K
Sbjct: 172 LERALINFMLDLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTT---------- 221
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR--------------- 251
DD +LI T+E P+ HR+ L E LPI+Y+ S CFR
Sbjct: 222 ------DDYFLIPTAEVPVTNYHREEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIR 275
Query: 252 ----------------------------QEDLTKSIA--YRVVNIVSGALNHAAAKKLDL 281
ED+ K + YRVV + SG L ++AK D+
Sbjct: 276 QHQFNKVELVKFAKPEDSYDELEKLTADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDI 335
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W P G + E+ SCSN YQ+RR +R+ ++ + K+++VH LN + A R + A
Sbjct: 336 EVWMPSYGRYVEISSCSNFESYQARRANIRF---RRKDGKLDYVHTLNGSGLAVGRTLAA 392
Query: 342 ILETHQTETG-VRIPDCLRKFV 362
+LE Q + G V +P+ LRK++
Sbjct: 393 VLENFQQKDGTVVVPEVLRKYM 414
>gi|256824062|ref|YP_003148022.1| seryl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
gi|256687455|gb|ACV05257.1| seryl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
Length = 426
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 187/432 (43%), Gaps = 96/432 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI---------- 64
+P+ VR +Q+ R ++ +VD+V+E + + R + + ++ + K I
Sbjct: 10 NPDAVRASQRTRGEDESVVDRVLEVEARSRSKQAEFESLRAEQKTFGKTIAQAPADQKAE 69
Query: 65 ----GEKMKAKEPVGDSSTLP------------GNHLHPSVPVSNNED-----ENGIVRT 103
G++M A+ ++ GN + P VP +D E G R
Sbjct: 70 LAAQGKEMAARVKALEAEAGELAAEADRLLRTIGNVVKPQVPAGGEDDFEVLEEVGTPRD 129
Query: 104 KGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
E + H++L ++ +D E GA V+G R YFL G L++ ++ AL ++
Sbjct: 130 FA-AEGFEPRDHLELGELLGAIDMERGAKVSGSRFYFLTGIGARLELAMMNMALDLALKN 188
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
G+TP+ TP + +VM L +E+Y + E DD+YL+ TSE
Sbjct: 189 GFTPMITPSLVNPDVMAGAGFLDSHADEVYHL---------------EADDQYLVGTSEV 233
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------DLTK----------- 257
+ H D L A P RY G STC+R+E TK
Sbjct: 234 ALAGYHADEILDLADGPRRYAGWSTCYRREAGSHGKDTRGIIRVHQFTKLEMFIYCTAEE 293
Query: 258 -------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
+ YRV+++ +G L AA+K D EAW P G REL S S
Sbjct: 294 AETEHERLLALEKEMLGAMELPYRVIDVAAGDLGGPAARKFDCEAWVPTQGKHRELTSTS 353
Query: 299 NCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDC 357
NC +Q+RRL R + + + V LN T ATTR + AILE HQ G VR+P+
Sbjct: 354 NCTTFQARRLRTR--ERVAGGKGTQVVATLNGT-LATTRWLVAILENHQLPDGSVRVPEA 410
Query: 358 LRKFVPAVYVNE 369
LR ++ + V E
Sbjct: 411 LRPYLGGLEVIE 422
>gi|415709479|ref|ZP_11463104.1| seryl-tRNA synthetase [Gardnerella vaginalis 6420B]
gi|388056151|gb|EIK79027.1| seryl-tRNA synthetase [Gardnerella vaginalis 6420B]
Length = 428
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 197/439 (44%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIEND------LK-WRQFRHKADNFN 54
+LD+ R + V+++Q+ R ++VELVD+V+ ND LK + + R +
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLHNDDLRRTALKAFEEARAEQKAIG 56
Query: 55 K----------------FKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
K K L SKV K ++++ D +T N + P E
Sbjct: 57 KKVATASAEEKVALIAETKELASKVAEYKAESEKATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSRAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL VR ++M + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR----ERMEDGGTRPVSTLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ E G + IP ++ ++
Sbjct: 397 NHQHEDGSIDIPKAMQAYM 415
>gi|423069179|ref|ZP_17057967.1| seryl-tRNA synthetase [Streptococcus intermedius F0395]
gi|355365579|gb|EHG13302.1| seryl-tRNA synthetase [Streptococcus intermedius F0395]
Length = 425
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 190/447 (42%), Gaps = 107/447 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ RT D + + + R + +DK+ E D K R+ K +N +N S
Sbjct: 1 MLDIKRIRT----DFDTIAQKLATRGVDAVTLDKMKEFDSKRRELLVKVENLKAERNTVS 56
Query: 62 KVIGEKMKAKEPVGD-----------------------------SSTLPGNHLHPSVPVS 92
I + + KE D ++TLP N H SVPV
Sbjct: 57 AEIAQAKRNKENADDKIAAMQKLSTEVKALDAELAEIDATLTEFTTTLP-NIPHDSVPVG 115
Query: 93 NNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+ED+N VR G D EV+ +H DL +D +D E GA V G R F KGP
Sbjct: 116 ADEDDNVEVRRWGTPRVFDFEVK---AHWDLGENLDILDWERGAKVTGARFLFYKGPGAR 172
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L+ + + L + ++GYT + P+ + + M Q +F E+ +++
Sbjct: 173 LERAIYNFMLDEHQKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELC----------- 221
Query: 208 EKDELDDKY-LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
D Y LI T+E P+ +RD L LPI + +S FR E
Sbjct: 222 -----DTNYVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276
Query: 254 --------------------DLTKSIA------------YRVVNIVSGALNHAAAKKLDL 281
+L K A YRVV + +G + +AAK DL
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W P +RE+ SCSN D+Q+RR +RY + + K++ +H LN + A R + A
Sbjct: 337 EVWIPAQNTYREISSCSNTEDFQARRAQIRY--RDEADGKVKLLHTLNGSGLAVGRTVAA 394
Query: 342 ILETHQTETG-VRIPDCLRKFVPAVYV 367
ILE +Q E G V IP+ LR ++ V V
Sbjct: 395 ILENYQNEDGSVTIPEVLRSYMGGVDV 421
>gi|297242870|ref|ZP_06926808.1| seryl-tRNA synthetase [Gardnerella vaginalis AMD]
gi|296889081|gb|EFH27815.1| seryl-tRNA synthetase [Gardnerella vaginalis AMD]
Length = 428
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 197/439 (44%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIEND------LK-WRQFRHKADNFN 54
+LD+ R + V+++Q+ R ++VELVD+V+ ND LK + + R +
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLHNDDLRRTALKAFEEARAEQKAIG 56
Query: 55 K----------------FKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
K K L SKV K ++++ D +T N + P E
Sbjct: 57 KKVATASAEEKVALIAETKELASKVAEYKAESEKATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSRAEHQKLLSMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL VR ++M + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR----ERMEDGGTRPVSTLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ E G + IP ++ ++
Sbjct: 397 NHQHEDGSIDIPKAMQAYM 415
>gi|433644025|ref|YP_007289784.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070008]
gi|432160573|emb|CCK57900.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070008]
Length = 419
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 187/434 (43%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR++Q R ++ LVD ++ D R AD+ + S
Sbjct: 1 MIDLKLLRE----NPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAAS 56
Query: 62 KVIGEKMKAKEP--------------------VGDSSTLPGNHLHPS------VPVSNNE 95
K +G + P V + HL S VP + E
Sbjct: 57 KSVGGASPEERPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVP-AGGE 115
Query: 96 DENGIVRTKGD-TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ G+ + + H++L + +D + GA V+G R YFL G LQ+GL+Q
Sbjct: 116 DDYAVLDVVGEPSYLENPKDHLELGEALGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
AL ++ G+ P P +R EVM L EE+Y+V G G
Sbjct: 176 LALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDG--------------- 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H L + P+RY G S+CFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ +G L +AA+K D EAW P G
Sbjct: 281 GFVYCTPADAEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQG 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
A+REL S SNC +Q+RRL RY + + K + LN T ATTR + AILE HQ
Sbjct: 341 AYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGT-LATTRWLVAILENHQRP 396
Query: 350 TG-VRIPDCLRKFV 362
G VR+PD L FV
Sbjct: 397 DGSVRVPDALVPFV 410
>gi|433653770|ref|YP_007297478.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433291959|gb|AGB17781.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 423
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 157/335 (46%), Gaps = 71/335 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRK----KYSHVDLITMIDGVDSEAGAIVA 134
T+P N H SVPV +++ +N +R GD VRK H ++ + +D EA + V
Sbjct: 102 TIP-NIPHESVPVGDSDADNVEIRRWGD--VRKFDFEIKPHWNIGVELGILDFEAASRVT 158
Query: 135 GGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELY 193
G R F KG L+ L+ + + EK GYT ++ PF + + M QL +F+E+ +
Sbjct: 159 GSRFTFYKGLGCRLERSLISFMMDLHTEKHGYTEVFPPFMVHRRSMYGTGQLPKFEEDAF 218
Query: 194 KVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
KV G D +LI T+E P+ ++R++ + LPI S CFRQE
Sbjct: 219 KVAGT---------------DYFLIPTAEVPVTNMYRETIIDAEELPIYNCAYSACFRQE 263
Query: 254 -------------------------------------------DLTKS--IAYRVVNIVS 268
D+ K+ I YRVV+I +
Sbjct: 264 AGSAGRDTRGLIRQHQFNKVELVKITEPERSYEELEKMVNDAEDVLKTLGIPYRVVSICT 323
Query: 269 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
G L AAKK DLE W P G + E+ SCSNC D+Q+RR ++Y K K ++VH L
Sbjct: 324 GDLGFTAAKKYDLEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKGGGKAQYVHTL 381
Query: 329 NATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
N + A R AILE +Q E G V IP+ LR ++
Sbjct: 382 NGSGVAVGRTFAAILENYQQEDGSVVIPEALRPYM 416
>gi|15610970|ref|NP_218351.1| SERYL-tRNA synthetase SerS (serine--tRNA ligase) (SERRS) (serine
translase) [Mycobacterium tuberculosis H37Rv]
gi|15843458|ref|NP_338495.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
gi|31795008|ref|NP_857501.1| seryl-tRNA synthetase [Mycobacterium bovis AF2122/97]
gi|121639752|ref|YP_979976.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148663702|ref|YP_001285225.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|148825041|ref|YP_001289795.1| seryl-tRNA synthetase [Mycobacterium tuberculosis F11]
gi|167969949|ref|ZP_02552226.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|224992247|ref|YP_002646937.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800882|ref|YP_003033884.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN 1435]
gi|254552950|ref|ZP_05143397.1| seryl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289441272|ref|ZP_06431016.1| seryl-tRNA synthetase [Mycobacterium tuberculosis T46]
gi|289445435|ref|ZP_06435179.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CPHL_A]
gi|289572087|ref|ZP_06452314.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T17]
gi|289747675|ref|ZP_06507053.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 02_1987]
gi|289748365|ref|ZP_06507743.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T92]
gi|289755967|ref|ZP_06515345.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis EAS054]
gi|289764020|ref|ZP_06523398.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis GM 1503]
gi|294993037|ref|ZP_06798728.1| seryl-tRNA synthetase [Mycobacterium tuberculosis 210]
gi|297636517|ref|ZP_06954297.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
gi|297733512|ref|ZP_06962630.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
gi|298527309|ref|ZP_07014718.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 94_M4241A]
gi|306778197|ref|ZP_07416534.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu001]
gi|306778727|ref|ZP_07417064.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu002]
gi|306786754|ref|ZP_07425076.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu003]
gi|306786884|ref|ZP_07425206.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu004]
gi|306791439|ref|ZP_07429741.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu005]
gi|306795504|ref|ZP_07433806.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu006]
gi|306801479|ref|ZP_07438147.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu008]
gi|306805686|ref|ZP_07442354.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu007]
gi|306970081|ref|ZP_07482742.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu009]
gi|307082021|ref|ZP_07491191.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu011]
gi|307086634|ref|ZP_07495747.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu012]
gi|313660843|ref|ZP_07817723.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
gi|339633829|ref|YP_004725471.1| seryl-tRNA synthetase [Mycobacterium africanum GM041182]
gi|340628803|ref|YP_004747255.1| seryl-tRNA synthetase SERS [Mycobacterium canettii CIPT 140010059]
gi|375298104|ref|YP_005102372.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 4207]
gi|378773614|ref|YP_005173347.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Mexico]
gi|383309548|ref|YP_005362359.1| seryl-tRNA synthetase [Mycobacterium tuberculosis RGTB327]
gi|385993045|ref|YP_005911344.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CCDC5180]
gi|385996687|ref|YP_005914986.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CCDC5079]
gi|386000626|ref|YP_005918926.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CTRI-2]
gi|386006629|ref|YP_005924908.1| seryl-tRNA synthetase [Mycobacterium tuberculosis RGTB423]
gi|392388428|ref|YP_005310057.1| serS [Mycobacterium tuberculosis UT205]
gi|392434318|ref|YP_006475363.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 605]
gi|397675795|ref|YP_006517331.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
gi|422815089|ref|ZP_16863307.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CDC1551A]
gi|424806395|ref|ZP_18231826.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis W-148]
gi|424945709|ref|ZP_18361405.1| seryl-tRNA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|433628977|ref|YP_007262606.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140060008]
gi|449065953|ref|YP_007433036.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Korea 1168P]
gi|54039689|sp|P67562.1|SYS_MYCBO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|54042040|sp|P67561.1|SYS_MYCTU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166222746|sp|A1KQG9.1|SYS_MYCBP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166222750|sp|A5U9G3.1|SYS_MYCTA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|254783038|sp|C1AIU0.1|SYS_MYCBT RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|13883829|gb|AAK48309.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
gi|31620606|emb|CAD96050.1| SERYL-TRNA SYNTHETASE SERS (SERINE--TRNA LIGASE) (SERRS) (SERINE
TRANSLASE) [Mycobacterium bovis AF2122/97]
gi|121495400|emb|CAL73887.1| seryl-tRNA synthetase serS [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148507854|gb|ABQ75663.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|148723568|gb|ABR08193.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis F11]
gi|224775363|dbj|BAH28169.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322386|gb|ACT26989.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 1435]
gi|289414191|gb|EFD11431.1| seryl-tRNA synthetase [Mycobacterium tuberculosis T46]
gi|289418393|gb|EFD15594.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CPHL_A]
gi|289545841|gb|EFD49489.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T17]
gi|289688203|gb|EFD55691.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 02_1987]
gi|289688952|gb|EFD56381.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T92]
gi|289696554|gb|EFD63983.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis EAS054]
gi|289711526|gb|EFD75542.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis GM 1503]
gi|298497103|gb|EFI32397.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 94_M4241A]
gi|308213530|gb|EFO72929.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu001]
gi|308328286|gb|EFP17137.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu002]
gi|308328688|gb|EFP17539.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu003]
gi|308336434|gb|EFP25285.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu004]
gi|308340028|gb|EFP28879.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu005]
gi|308344026|gb|EFP32877.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu006]
gi|308347812|gb|EFP36663.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu007]
gi|308351748|gb|EFP40599.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu008]
gi|308352437|gb|EFP41288.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu009]
gi|308360344|gb|EFP49195.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu011]
gi|308363977|gb|EFP52828.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu012]
gi|323717501|gb|EGB26704.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CDC1551A]
gi|326905671|gb|EGE52604.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis W-148]
gi|328460610|gb|AEB06033.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 4207]
gi|339296642|gb|AEJ48753.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CCDC5079]
gi|339300239|gb|AEJ52349.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CCDC5180]
gi|339333185|emb|CCC28918.1| SERYL-tRNA synthetase SERS (serine--tRNA ligase) [Mycobacterium
africanum GM041182]
gi|340006993|emb|CCC46184.1| seryl-tRNA synthetase SERS (serine--tRNA ligase) (SERRS) (serine
translase) [Mycobacterium canettii CIPT 140010059]
gi|341603773|emb|CCC66454.1| seryl-tRNA synthetase serS [Mycobacterium bovis BCG str. Moreau
RDJ]
gi|344221674|gb|AEN02305.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CTRI-2]
gi|356595935|gb|AET21164.1| Seryl-tRNA synthetase [Mycobacterium bovis BCG str. Mexico]
gi|358230224|dbj|GAA43716.1| seryl-tRNA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|378546979|emb|CCE39258.1| serS [Mycobacterium tuberculosis UT205]
gi|379030232|dbj|BAL67965.1| seryl-tRNA synthetase [Mycobacterium tuberculosis str. Erdman =
ATCC 35801]
gi|380723501|gb|AFE18610.1| seryl-tRNA synthetase [Mycobacterium tuberculosis RGTB327]
gi|380727117|gb|AFE14912.1| seryl-tRNA synthetase [Mycobacterium tuberculosis RGTB423]
gi|392055728|gb|AFM51286.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 605]
gi|395140701|gb|AFN51860.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
gi|432156583|emb|CCK53845.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140060008]
gi|440583348|emb|CCG13751.1| SERYL-TRNA SYNTHETASE SERS (SERINE-TRNA LIGASE) (SERRS) (SERINE
TRANSLASE) [Mycobacterium tuberculosis 7199-99]
gi|444897397|emb|CCP46663.1| SERYL-tRNA synthetase SerS (serine--tRNA ligase) (SERRS) (serine
translase) [Mycobacterium tuberculosis H37Rv]
gi|449034461|gb|AGE69888.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Korea 1168P]
Length = 419
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 187/434 (43%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR++Q R ++ LVD ++ D R AD+ + S
Sbjct: 1 MIDLKLLRE----NPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAAS 56
Query: 62 KVIGEKMKAKEP--------------------VGDSSTLPGNHLHPS------VPVSNNE 95
K +G + P V + HL S VP + E
Sbjct: 57 KSVGGASPEERPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVP-AGGE 115
Query: 96 DENGIVRTKGD-TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ G+ + + H++L + +D + GA V+G R YFL G LQ+GL+Q
Sbjct: 116 DDYAVLDVVGEPSYLENPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
AL ++ G+ P P +R EVM L EE+Y+V G G
Sbjct: 176 LALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDG--------------- 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H L + P+RY G S+CFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ +G L +AA+K D EAW P G
Sbjct: 281 GFVYCTPADAEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQG 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
A+REL S SNC +Q+RRL RY + + K + LN T ATTR + AILE HQ
Sbjct: 341 AYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGT-LATTRWLVAILENHQRP 396
Query: 350 TG-VRIPDCLRKFV 362
G VR+PD L FV
Sbjct: 397 DGSVRVPDALVPFV 410
>gi|296454816|ref|YP_003661960.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301]
gi|296184249|gb|ADH01131.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301]
Length = 428
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 192/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
+LD+ R + V+++Q+ R ++VELVD+V+ +D R+
Sbjct: 1 MLDIQFIREH----TDIVKESQRKRGESVELVDEVLSSDTVRREALKAFEEARAQQKEIG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA + K L KV K KA + +T N + P P E
Sbjct: 57 KKVASAPADEKAKLIAETKELSQKVSEYKSKADSAAEEYTTAMWKLSNIVEPEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G V G R YFL+G +Q+
Sbjct: 116 DDYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H + L + P+RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 ----------QEDLTK----------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QED K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYAKQEDSCKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL +R ++M + V LN T ATTR + AI+E
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNIR----ERMEDGGTRPVSTLNGT-LATTRWLVAIME 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ + G + IP +R ++
Sbjct: 397 NHQQKDGSIEIPQAMRAYM 415
>gi|415727320|ref|ZP_11471418.1| seryl-tRNA synthetase [Gardnerella vaginalis 00703Dmash]
gi|388062217|gb|EIK84835.1| seryl-tRNA synthetase [Gardnerella vaginalis 00703Dmash]
Length = 428
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 193/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
+LD+ R + V+++Q+ R ++VELVD+V+ ND R
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLRNDDLRRDALKAFEAARAEQKAIG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA + K L KV K ++++ D +T N + P E
Sbjct: 57 KKVASAPAEEKAALIAETKELAQKVAEYKAESEKATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSRAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL VR ++M + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR----ERMEDGGTRPVSTLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ E G + IP ++ ++
Sbjct: 397 NHQHEDGSIDIPKAMQAYM 415
>gi|448533875|ref|ZP_21621526.1| seryl-tRNA ligase [Halorubrum hochstenium ATCC 700873]
gi|445705367|gb|ELZ57266.1| seryl-tRNA ligase [Halorubrum hochstenium ATCC 700873]
Length = 456
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 196/445 (44%), Gaps = 99/445 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGE-------- 66
+PE VR+ ++ +V+L D++++ D +WR+ + + D+ +N S IGE
Sbjct: 10 NPEVVREALDNKGVDVDL-DRILDVDEEWRELKRRGDDLRHERNEVSSKIGELKGAGEEE 68
Query: 67 ---------------------KMKAKEPVGDSSTLPGNHL-HPSVPVSNNEDENGIVRTK 104
+ +A E ++S L + SVPV +E EN R +
Sbjct: 69 AAQEAIERSQELKSELQEVEERAEALESELEASLLELPQIPQESVPVGEDESENVERRRE 128
Query: 105 GDTEVRKK----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW 160
G ++R H DL ++ +D E GA VAGG Y KG L+ L+Q+ L
Sbjct: 129 GFDDLRDLPDDVTPHYDLGEELEILDFERGAKVAGGGFYVAKGDGAHLEHALIQFMLDVH 188
Query: 161 IEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIAT 220
E+GY ++ P + E M+ QL +F E+ Y+V G E+ D DD +L+ T
Sbjct: 189 REQGYEDVFPPIPVNSESMRGTGQLPKFTEDAYRVEGSNEEEYDD-------DDLWLLPT 241
Query: 221 SEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----DLTKSIA--------------- 260
+E P+ +HRD L LP++Y + FRQE T+ I
Sbjct: 242 AEVPVTNLHRDEILLGEDLPLKYQAYTPNFRQEAGEHGTETRGIVRVHQFNKVEMVNFVR 301
Query: 261 -------------------------YRVVNIVSGALNHAAAKKLDLEAWFPG-------- 287
YR++ + +G L AKK D+E W PG
Sbjct: 302 PEESDDRFEGLVDEAEEVLRRLELPYRILEMCTGDLGFTQAKKYDVEVWAPGDDMDEGPE 361
Query: 288 -SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G + E+ S SN +Q+RR ++Y ++ +E E++H LN + A R++ AILE +
Sbjct: 362 EGGRWLEVSSVSNFEGFQARRAGIQY--REEHHESAEYLHTLNGSGLAVPRIVVAILEYY 419
Query: 347 QTETG-VRIPDCLRKFVPAVYVNEA 370
Q + G V +P+ LR ++ V E
Sbjct: 420 QNDDGTVTVPEALRPYMGGTEVIEG 444
>gi|50843654|ref|YP_056881.1| seryl-tRNA synthetase [Propionibacterium acnes KPA171202]
gi|289425915|ref|ZP_06427667.1| serine--tRNA ligase [Propionibacterium acnes SK187]
gi|289427861|ref|ZP_06429565.1| serine--tRNA ligase [Propionibacterium acnes J165]
gi|295131740|ref|YP_003582403.1| serine--tRNA ligase [Propionibacterium acnes SK137]
gi|335055122|ref|ZP_08547912.1| serine--tRNA ligase [Propionibacterium sp. 434-HC2]
gi|354605760|ref|ZP_09023735.1| seryl-tRNA synthetase [Propionibacterium sp. 5_U_42AFAA]
gi|365963841|ref|YP_004945407.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365975020|ref|YP_004956579.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn33]
gi|386025144|ref|YP_005943450.1| serine-tRNA ligase [Propionibacterium acnes 266]
gi|387504578|ref|YP_005945807.1| seryl-tRNA synthetase [Propionibacterium acnes 6609]
gi|417930761|ref|ZP_12574135.1| serine--tRNA ligase [Propionibacterium acnes SK182]
gi|422383805|ref|ZP_16463946.1| serine--tRNA ligase [Propionibacterium acnes HL096PA3]
gi|422386636|ref|ZP_16466753.1| serine--tRNA ligase [Propionibacterium acnes HL096PA2]
gi|422391650|ref|ZP_16471730.1| serine--tRNA ligase [Propionibacterium acnes HL099PA1]
gi|422423817|ref|ZP_16500768.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA1]
gi|422426585|ref|ZP_16503505.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA1]
gi|422430412|ref|ZP_16507293.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA2]
gi|422434459|ref|ZP_16511317.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA2]
gi|422442985|ref|ZP_16519786.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA1]
gi|422445237|ref|ZP_16521990.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA1]
gi|422448146|ref|ZP_16524878.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA3]
gi|422452630|ref|ZP_16529327.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA3]
gi|422455646|ref|ZP_16532316.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA1]
gi|422461101|ref|ZP_16537735.1| seryl-tRNA synthetase [Propionibacterium acnes HL038PA1]
gi|422474381|ref|ZP_16550848.1| seryl-tRNA synthetase [Propionibacterium acnes HL056PA1]
gi|422476074|ref|ZP_16552513.1| seryl-tRNA synthetase [Propionibacterium acnes HL007PA1]
gi|422482190|ref|ZP_16558589.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA1]
gi|422484570|ref|ZP_16560947.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA2]
gi|422486464|ref|ZP_16562810.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA2]
gi|422496655|ref|ZP_16572937.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA3]
gi|422501821|ref|ZP_16578070.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA2]
gi|422505308|ref|ZP_16581539.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA2]
gi|422507557|ref|ZP_16583739.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA2]
gi|422512288|ref|ZP_16588421.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA2]
gi|422519258|ref|ZP_16595320.1| seryl-tRNA synthetase [Propionibacterium acnes HL074PA1]
gi|422520136|ref|ZP_16596178.1| seryl-tRNA synthetase [Propionibacterium acnes HL045PA1]
gi|422525214|ref|ZP_16601216.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA1]
gi|422527664|ref|ZP_16603651.1| seryl-tRNA synthetase [Propionibacterium acnes HL053PA1]
gi|422533363|ref|ZP_16609301.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA1]
gi|422536514|ref|ZP_16612421.1| seryl-tRNA synthetase [Propionibacterium acnes HL078PA1]
gi|422538977|ref|ZP_16614851.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA1]
gi|422541857|ref|ZP_16617713.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA1]
gi|422546775|ref|ZP_16622599.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA3]
gi|422548886|ref|ZP_16624694.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA1]
gi|422552806|ref|ZP_16628594.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA3]
gi|422556156|ref|ZP_16631915.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA2]
gi|422556644|ref|ZP_16632396.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA2]
gi|422558815|ref|ZP_16634548.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA1]
gi|422561534|ref|ZP_16637219.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA1]
gi|422567908|ref|ZP_16643533.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA2]
gi|422569184|ref|ZP_16644799.1| seryl-tRNA synthetase [Propionibacterium acnes HL067PA1]
gi|422577321|ref|ZP_16652855.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA4]
gi|81826360|sp|Q6A5P0.1|SYS_PROAC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|50841256|gb|AAT83923.1| seryl-tRNA synthetase [Propionibacterium acnes KPA171202]
gi|289153691|gb|EFD02400.1| serine--tRNA ligase [Propionibacterium acnes SK187]
gi|289158744|gb|EFD06944.1| serine--tRNA ligase [Propionibacterium acnes J165]
gi|291377175|gb|ADE01030.1| serine--tRNA ligase [Propionibacterium acnes SK137]
gi|313765178|gb|EFS36542.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA1]
gi|313771554|gb|EFS37520.1| seryl-tRNA synthetase [Propionibacterium acnes HL074PA1]
gi|313808611|gb|EFS47071.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA2]
gi|313811953|gb|EFS49667.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA1]
gi|313819045|gb|EFS56759.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA2]
gi|313821678|gb|EFS59392.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA1]
gi|313823814|gb|EFS61528.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA2]
gi|313832385|gb|EFS70099.1| seryl-tRNA synthetase [Propionibacterium acnes HL007PA1]
gi|313834182|gb|EFS71896.1| seryl-tRNA synthetase [Propionibacterium acnes HL056PA1]
gi|314916818|gb|EFS80649.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA4]
gi|314918995|gb|EFS82826.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA1]
gi|314921174|gb|EFS85005.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA3]
gi|314926153|gb|EFS89984.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA3]
gi|314932479|gb|EFS96310.1| seryl-tRNA synthetase [Propionibacterium acnes HL067PA1]
gi|314956294|gb|EFT00666.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA1]
gi|314958685|gb|EFT02787.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA1]
gi|314960992|gb|EFT05093.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA2]
gi|314968817|gb|EFT12915.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA1]
gi|314975052|gb|EFT19147.1| seryl-tRNA synthetase [Propionibacterium acnes HL053PA1]
gi|314977463|gb|EFT21558.1| seryl-tRNA synthetase [Propionibacterium acnes HL045PA1]
gi|314979051|gb|EFT23145.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA2]
gi|314985840|gb|EFT29932.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA1]
gi|314985971|gb|EFT30063.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA2]
gi|314989277|gb|EFT33368.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA3]
gi|315081396|gb|EFT53372.1| seryl-tRNA synthetase [Propionibacterium acnes HL078PA1]
gi|315084964|gb|EFT56940.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA2]
gi|315087495|gb|EFT59471.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA3]
gi|315089597|gb|EFT61573.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA1]
gi|315096907|gb|EFT68883.1| seryl-tRNA synthetase [Propionibacterium acnes HL038PA1]
gi|315102807|gb|EFT74783.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA1]
gi|315107363|gb|EFT79339.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA1]
gi|327332982|gb|EGE74714.1| serine--tRNA ligase [Propionibacterium acnes HL096PA2]
gi|327333974|gb|EGE75689.1| serine--tRNA ligase [Propionibacterium acnes HL096PA3]
gi|327448690|gb|EGE95344.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA1]
gi|327449117|gb|EGE95771.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA2]
gi|327450347|gb|EGE97001.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA2]
gi|327455505|gb|EGF02160.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA3]
gi|327456161|gb|EGF02816.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA2]
gi|328756832|gb|EGF70448.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA1]
gi|328759113|gb|EGF72729.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA2]
gi|328762221|gb|EGF75717.1| serine--tRNA ligase [Propionibacterium acnes HL099PA1]
gi|332676603|gb|AEE73419.1| serine-tRNA ligase [Propionibacterium acnes 266]
gi|333762729|gb|EGL40215.1| serine--tRNA ligase [Propionibacterium sp. 434-HC2]
gi|335278623|gb|AEH30528.1| seryl-tRNA synthetase [Propionibacterium acnes 6609]
gi|340769666|gb|EGR92188.1| serine--tRNA ligase [Propionibacterium acnes SK182]
gi|353558416|gb|EHC27780.1| seryl-tRNA synthetase [Propionibacterium sp. 5_U_42AFAA]
gi|365740522|gb|AEW84724.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365745019|gb|AEW80216.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn33]
gi|456739291|gb|EMF63858.1| seryl-tRNA ligase [Propionibacterium acnes FZ1/2/0]
Length = 424
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 190/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
++D L RT DP+ VR++Q R ++ +VD V+ D R+
Sbjct: 1 MIDPKLLRT----DPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ ++ K + +V K A E + L GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E + H+++ + +D E G ++G R Y L G L+
Sbjct: 116 DEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 --DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 254 --------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D + I ++V+++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +R+ + + +E + LN T CA TR+I +LE
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VRIP+ LR ++
Sbjct: 397 HQQADGSVRIPEALRPYL 414
>gi|312622837|ref|YP_004024450.1| seryl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203304|gb|ADQ46631.1| seryl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
Length = 420
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 171/369 (46%), Gaps = 79/369 (21%)
Query: 50 ADNFNKFKNLCSKVIGEKMKAKEPVGDSS-----TLPGNHLHPSVPVSNNEDENGIVRTK 104
D N+ K+L K+ K KE V D T+P N H SVPV ++ EN VR
Sbjct: 69 TDLMNELKDLSDKIKELDCKVKE-VEDEIENILLTIP-NIPHESVPVGKDDTENVEVRRW 126
Query: 105 GDTEVRKK----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW 160
G EVR+ H ++ + +D E + V+G R F +G L+ L+ + L
Sbjct: 127 G--EVREPEFEIKPHWEIGINLGILDFERASKVSGSRFTFYRGLGARLERALINFMLDLH 184
Query: 161 IEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIA 219
IEK GYT L+ PF + ++ M QL +F+E+ +K DD +LI
Sbjct: 185 IEKHGYTELFPPFLVVRKSMIGTGQLPKFEEDAFKTT----------------DDYFLIP 228
Query: 220 TSEQPICAVHRDSWLPEASLPIRYLGVSTCFR---------------------------- 251
T+E P+ HR+ L E LPI+Y+ S CFR
Sbjct: 229 TAEVPVTNYHREEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFT 288
Query: 252 ---------------QEDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFREL 294
ED+ K + YRVV + SG L ++AK D+E W P G + E+
Sbjct: 289 KPEDSYDELEKLTADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVEI 348
Query: 295 VSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VR 353
SCSN YQ+RR +R+ ++ + K+++VH LN + A R + AILE Q + G V
Sbjct: 349 SSCSNFESYQARRANIRF---RRKDGKLDYVHTLNGSGLAVGRTLAAILENFQQKDGTVV 405
Query: 354 IPDCLRKFV 362
+P+ LRK++
Sbjct: 406 VPEVLRKYM 414
>gi|386720581|ref|YP_006186906.1| seryl-tRNA synthetase [Paenibacillus mucilaginosus K02]
gi|384087705|gb|AFH59141.1| seryl-tRNA synthetase [Paenibacillus mucilaginosus K02]
Length = 426
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 192/442 (43%), Gaps = 100/442 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ L R GD ++V++ +R N++ +D+ D RQ + + +N+ S
Sbjct: 1 MLDVKLLR----GDLDRVKQGLSNRGANLDDLDRFTSLDTNRRQLLQEVEQLKNRRNVVS 56
Query: 62 KVIGEKMKAKEP----------VGDS-------------------STLPGNHLHPSVPVS 92
+ + + KAKE VGD +LP N SVPV
Sbjct: 57 QEVAQLKKAKENADHLIEEMKVVGDRIKALDEEIRVLEADLDSILMSLP-NLPQDSVPVG 115
Query: 93 NNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
++E+EN +R GD + H ++ +D +D E V G R F KG L+
Sbjct: 116 SSEEENVEIRRVGDVPAFGFEPKPHWEVAQALDILDFENAGKVTGSRFVFYKGLGARLER 175
Query: 151 GLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + + ++ GY + P + ++ + QL +F E+++K+ G
Sbjct: 176 ALINFMMDLHADQHGYEEMLPPQIVNRDSLTGTGQLPKFAEDVFKLEGT----------- 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D +LI T+E P+ HRD L LP ++ S CFR E
Sbjct: 225 ----DYFLIPTAEVPVTNYHRDDILSAEDLPKYFVAFSACFRSEAGSAGRDTRGLIRQHQ 280
Query: 254 ----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+L K + YRV+++ +G + +++K DLE W
Sbjct: 281 FNKIELVKLTLPEQSNDELEKLTADAEKVLQLLKLPYRVLSLCTGDIGFSSSKTYDLEVW 340
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P S +RE+ SCSN D+Q+RR +R+ + + K EFVH LN + A R + AILE
Sbjct: 341 LPNSNTYREISSCSNFEDFQARRANIRF--RRDVKAKPEFVHTLNGSGLALGRTVAAILE 398
Query: 345 THQTETG-VRIPDCLRKFVPAV 365
+Q E G V IP+ LR ++ V
Sbjct: 399 NYQQEDGSVLIPEVLRPYMGGV 420
>gi|386347714|ref|YP_006045963.1| seryl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
gi|339412681|gb|AEJ62246.1| Seryl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
Length = 425
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 162/356 (45%), Gaps = 72/356 (20%)
Query: 55 KFKNLCSKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEV 109
+ K +++ GE +E + + N HP PV E +N +R G D E
Sbjct: 75 RLKEEIARLEGELAAVEEELRREALRIPNLSHPEAPVGKEEKDNLEIRRWGEVPSFDFEP 134
Query: 110 RKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLY 169
R H++L ++D VD + A V+G + Y+LK L++ L++YAL EKG+
Sbjct: 135 R---DHLELGRLLDIVDFDRAAKVSGAKFYYLKNEGTLLELALIRYALDVLREKGFDLFT 191
Query: 170 TPFFMRKEVMQEVA-QLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAV 228
TP R+ +++ + Q + +Y V E D L+ T+E + +
Sbjct: 192 TPDLARESIVEGIGFQPRGAESNIYTV---------------EETDLCLVGTAEITLGGM 236
Query: 229 HRDSWLPEASLPIRYLGVSTCFRQE---------------DLTK---------------- 257
+ D +P +LP+R+ G+S CFR+E TK
Sbjct: 237 YADEIIPGQALPLRFAGLSHCFRKEAGAAGQYSKGLYRVHQFTKVEMFVYCRPEESEGMH 296
Query: 258 --------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDY 303
I YRVV+ +G L A +K DLEAW PG + E+ S SNC DY
Sbjct: 297 RELLAIEEEIHAGLGIPYRVVDTCTGDLGAPAYRKFDLEAWMPGREGWGEITSTSNCTDY 356
Query: 304 QSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCL 358
Q+RRL VR+ + + K FVHMLN TA A RVI AILE Q G VRIP+ L
Sbjct: 357 QARRLGVRFKEAE--GGKPRFVHMLNGTALAVPRVIIAILENFQERDGSVRIPEAL 410
>gi|222640339|gb|EEE68471.1| hypothetical protein OsJ_26871 [Oryza sativa Japonica Group]
Length = 527
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 172/357 (48%), Gaps = 68/357 (19%)
Query: 76 DSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAI 132
++ ++P N HP PV +E+ +VR + ++ ++ H+ L +D D +A A
Sbjct: 168 EAQSIP-NTTHPDAPVGG--EESSVVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAE 224
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA--QLAQFDE 190
V+G + Y+LK AV L++ LV +A+++ +KG+TPL TP +R V+++ AQ +
Sbjct: 225 VSGSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQ 284
Query: 191 ELYKVIGKGEKVGDSAPEKDELD--DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
L V+ G + + +D D+ LI T+E P+ +H DS LP++ LP +Y+ S
Sbjct: 285 LLELVVLGGSYAHNFKKKVYSIDNSDQCLIGTAEIPVGGIHMDSILPDSDLPRKYVAYSH 344
Query: 249 CFRQEDL---------------------------------------------TKSIAYRV 263
CFR E + + ++
Sbjct: 345 CFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPEESDKCHEELITIEEELYASLGLHFKT 404
Query: 264 VNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT-------- 315
+++ +G L A +K D+EAW PG + E+ S SNC DYQSRRL +R+ +
Sbjct: 405 LDMATGDLGAPAYRKFDIEAWMPGLDRYGEISSASNCTDYQSRRLGIRFRPSPADPPPAN 464
Query: 316 ----KKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
K + +FVH LNATA A R+I ILE Q E G V IP+ LR F+ + V
Sbjct: 465 AKKGKGSSGPTQFVHTLNATAVAVPRLIICILENFQQEDGTVVIPEPLRPFMGGLEV 521
>gi|407475908|ref|YP_006789785.1| seryl-tRNA synthetase [Exiguobacterium antarcticum B7]
gi|407059987|gb|AFS69177.1| Seryl-tRNA synthetase [Exiguobacterium antarcticum B7]
Length = 425
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 156/337 (46%), Gaps = 66/337 (19%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
N H SVP+ ++ED+N ++R G+ + H DL+ + VD E V G R F
Sbjct: 106 NIPHDSVPIGSSEDDNVVIREVGEKPAFDFEAVPHWDLMEQLKIVDVERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
+G L+ L+ + + +K GYT + P + ++ M QL +F+E+ +KV
Sbjct: 166 YRGAGARLERALINFMMDLHQDKNGYTEILPPLMVNRDSMTGTGQLPKFEEDAFKV---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E + +L+ T+E P+ +HR+ L LPI Y S CFR E
Sbjct: 222 -----------EDTNYFLVPTAEVPVTNMHREEILSADQLPIGYAAYSQCFRSEAGSAGR 270
Query: 254 -------------------------------------DLTK--SIAYRVVNIVSGALNHA 274
D+ K + Y+V+++ + L
Sbjct: 271 DTRGLIRQHQFNKVELVRFVKPEESYEQLELLTGQAEDVLKLLKLPYQVLSMCTADLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN D+Q+RR +R+ ++ N K EFVH LN +A A
Sbjct: 331 AAKKYDIEVWMPSQGVYREISSCSNFEDFQARRAQIRF--RREANGKPEFVHTLNGSALA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEA 370
R + AILE +Q G V IP+ LR ++ + V +A
Sbjct: 389 VGRTVAAILENYQQADGSVVIPEVLRPYMGGLEVIQA 425
>gi|402570648|ref|YP_006619991.1| seryl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
gi|402251845|gb|AFQ42120.1| seryl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
Length = 421
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 153/333 (45%), Gaps = 71/333 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
H SVP+ ++E N VRT G D E + +H +L +D D A V G R F
Sbjct: 108 HTSVPIGSDESANVQVRTWGTPREFDFEPK---AHFELGEKLDVFDFIRAAKVTGARFTF 164
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
KG L+ L+ + L + KGYT + P+ + + M QL +F+++ +KV+G
Sbjct: 165 YKGLGAKLERSLISFMLDRHTSKGYTEILPPYIVNRASMTGTGQLPKFEDDAFKVVGT-- 222
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------- 253
D +LI T+E P+ ++RD L + PI + S+CFR E
Sbjct: 223 -------------DYFLIPTAEVPVTNLYRDEILDGSQFPIHHCAYSSCFRSEAGSAGRD 269
Query: 254 -------------DLTK-------------------------SIAYRVVNIVSGALNHAA 275
+L K + YRV+ + SG L ++
Sbjct: 270 TRGLIRQHQFNKVELVKFSLPEKSYDELELLTRDAEGILQDLELPYRVMALSSGDLGFSS 329
Query: 276 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACAT 335
AK DLE W P +RE+ SCSN D+Q+RR +R+ + K +K EFVH LN + A
Sbjct: 330 AKTYDLEVWLPSFNTYREISSCSNFEDFQARRANIRFRRGPK--DKPEFVHTLNGSGLAI 387
Query: 336 TRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
R + AI+E +Q + G VRIP L+ ++ Y+
Sbjct: 388 GRTVAAIMENYQDKDGRVRIPKVLQPYMGVEYI 420
>gi|307719618|ref|YP_003875150.1| seryl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
gi|306533343|gb|ADN02877.1| seryl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
Length = 425
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 151/328 (46%), Gaps = 72/328 (21%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGR 137
N HP PV E +N +R G D E R H++L ++D VD + A V+G +
Sbjct: 103 NLSHPEAPVGKEEKDNLEIRRWGKVPSFDFEPR---DHLELGRLLDIVDFDRAAKVSGAK 159
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEELYKVI 196
Y+LK L++ LV+YAL EKG+ TP R+ +++ + Q + +Y V
Sbjct: 160 FYYLKNEGALLELALVRYALDVLREKGFDLFTTPDLARESIVEGIGFQPRGAESNIYTV- 218
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--- 253
E D L+ T+E + ++ D +P +LP+R+ GVS CFR+E
Sbjct: 219 --------------EETDLCLVGTAEITLGGMYADEIIPGETLPLRFAGVSHCFRKEAGA 264
Query: 254 ------------DLTK------------------------------SIAYRVVNIVSGAL 271
TK I YRVV+ +G L
Sbjct: 265 AGQYSKGLYRVHQFTKVEMFVYCRPEESEGIHRELLAIEEEIHAGLGIPYRVVDTCTGDL 324
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
A +K DLEAW PG + E+ S SNC DYQ+RRL VR+ + + K FVHMLN T
Sbjct: 325 GAPAYRKFDLEAWMPGREGWGEITSTSNCTDYQARRLGVRFKEAE--GGKPRFVHMLNGT 382
Query: 332 ACATTRVICAILETHQTETG-VRIPDCL 358
A A RVI AILE Q G VRIP+ L
Sbjct: 383 ALAVPRVIIAILENFQERDGSVRIPEAL 410
>gi|406993397|gb|EKE12549.1| hypothetical protein ACD_13C00181G0003 [uncultured bacterium]
Length = 411
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 195/438 (44%), Gaps = 110/438 (25%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ R K E V+K + ++ L+DK++E D + R+ + + +N +
Sbjct: 1 MLDINFIRENK----ELVKKGVGAKGFDISLIDKILELDERRRKLLLEIEGLRAKRNRIA 56
Query: 62 ---------KVIGEKMKAKEP------------VGDSSTLPGNHLHPSVPVSNNEDENGI 100
K I E++K KEP + LP PV ++ EN
Sbjct: 57 EKKKPSEEGKEIKEELKDKEPELAEVQKEYKELLFKIPNLPSRR----SPVGKSDKENVE 112
Query: 101 VRTKGDT---EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYAL 157
+RT G+ E + K H+++ + +D E GA VAG + YFL G V L++ L + L
Sbjct: 113 LRTWGEPKKFEFKPK-DHLEIGKNLKILDFETGAKVAGSQFYFLYGDGVMLELALTNFVL 171
Query: 158 SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELD---- 213
K +KGY P+ TP + +G G AP+ +E
Sbjct: 172 DKLYKKGYQPVMTPDLAKSRY----------------YLGTG-----YAPKGNEAQTYTI 210
Query: 214 ---DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------DL 255
D LIAT+E + H D + E LP++Y+G S CFRQE
Sbjct: 211 CDTDLGLIATAEVTLAGAHADEIISEEKLPMKYVGYSHCFRQEAGAYGKYSKGLYRVHQF 270
Query: 256 TKS------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
TK+ I YRVV + + L AA+K+D+EAW
Sbjct: 271 TKTEMFIYCKPEDSERLHEEILALEEEIFQDLEIPYRVVEMCTADLGAMAARKIDIEAWM 330
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
PG + E+ S SN DYQ+R L +++ +K+ + +VHMLN TA +RV AILE
Sbjct: 331 PGRNDYGEVTSTSNVTDYQARNLNIKF---RKLTGETGYVHMLNGTAVVMSRVPIAILEN 387
Query: 346 HQTETG-VRIPDCLRKFV 362
+Q E G V+IP+ L+K++
Sbjct: 388 YQQEDGSVKIPEVLQKWM 405
>gi|392940049|ref|ZP_10305693.1| seryl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
gi|392291799|gb|EIW00243.1| seryl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
Length = 423
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 158/336 (47%), Gaps = 73/336 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIV 133
T+P N H SVP+ +++++N +R G+ +K+ H ++ + +D EA A V
Sbjct: 102 TIP-NIPHESVPIGDSDEDNVEIRRWGEP---RKFDFEPKPHWEIGEELGILDFEAAARV 157
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
G R F KG L+ L+ + L IEK GYT ++ PF + + M QL +F+E+
Sbjct: 158 TGSRFTFYKGLGARLERALINFMLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDA 217
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
+KV G D +LI T+E P+ ++RD+ + LPI + S CFRQ
Sbjct: 218 FKVYGT---------------DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQ 262
Query: 253 E--------------------------DLTKS-------------------IAYRVVNIV 267
E D KS + YRVV I
Sbjct: 263 EAGSAGRDTRGLIRQHQFNKVELVKFTDPDKSYEELEKMTRDAEEVLQALGLPYRVVAIC 322
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G L A+KK D+E W P G + E+ SCSNC D+Q+RR ++Y K K ++VH
Sbjct: 323 TGDLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHT 380
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R AILE +Q E G V IP+ LR ++
Sbjct: 381 LNGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|422389266|ref|ZP_16469363.1| serine--tRNA ligase [Propionibacterium acnes HL103PA1]
gi|422462790|ref|ZP_16539410.1| seryl-tRNA synthetase [Propionibacterium acnes HL060PA1]
gi|422565531|ref|ZP_16641179.1| seryl-tRNA synthetase [Propionibacterium acnes HL082PA2]
gi|314965938|gb|EFT10037.1| seryl-tRNA synthetase [Propionibacterium acnes HL082PA2]
gi|315095165|gb|EFT67141.1| seryl-tRNA synthetase [Propionibacterium acnes HL060PA1]
gi|327328793|gb|EGE70553.1| serine--tRNA ligase [Propionibacterium acnes HL103PA1]
Length = 424
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 190/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
++D L RT DP+ VR++Q R ++ +VD V+ D R+
Sbjct: 1 MIDPKLLRT----DPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEP---VGDSSTLPGNHLHPSVPVSNNE 95
KA+ ++ K + +V K A E D + GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLSRTKTISGEVADLKKAADEADAKFTDIAKTLGNVVTDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E + H+++ + +D E G ++G R Y L G L+
Sbjct: 116 DEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 --DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 254 --------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D + I ++V+++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +R+ + + +E + LN T CA TR+I +LE
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VRIP+ LR ++
Sbjct: 397 HQQADGSVRIPEALRPYL 414
>gi|298253331|ref|ZP_06977123.1| seryl-tRNA synthetase [Gardnerella vaginalis 5-1]
gi|297532726|gb|EFH71612.1| seryl-tRNA synthetase [Gardnerella vaginalis 5-1]
Length = 428
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 196/439 (44%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVI-ENDLKWRQFR------------- 47
+LD+ R + V+++Q+ R ++VELVD+V+ +DL+ +
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLRSDDLRRTALKAFEEARAEQKAIG 56
Query: 48 ---------HKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA + K L SKV K ++++ D +T N + P E
Sbjct: 57 KKVATASAEEKAALIAETKELASKVAEYKAESEKATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSRAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL VR ++M + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR----ERMEDGGTRPVSTLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ E G + IP ++ ++
Sbjct: 397 NHQHEDGSIDIPKAMQAYM 415
>gi|374992790|ref|YP_004968289.1| seryl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
gi|357211156|gb|AET65774.1| seryl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
Length = 421
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 152/330 (46%), Gaps = 65/330 (19%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
H SVP+ +E++N VRT G V + +H +L +D D A V G R F KG
Sbjct: 108 HESVPIGTDENDNIEVRTWGIPRVFDFEPKAHFELGEKLDIFDFVRAAKVTGARFTFYKG 167
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
L+ L+ + L + KGYT + P+ + + M QL +F+++ +KV+G
Sbjct: 168 LGAKLERSLISFMLDRHTSKGYTEILPPYLVNRGSMTGTGQLPKFEDDAFKVVGT----- 222
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------- 253
D +LI T+E P+ ++RD L LP+ + S+CFR E
Sbjct: 223 ----------DYFLIPTAEVPVTNLYRDEILDGNQLPMYHCAYSSCFRSEAGSAGRDTRG 272
Query: 254 ----------DLTK-------------------------SIAYRVVNIVSGALNHAAAKK 278
+L K + YRVV + +G L ++AK
Sbjct: 273 LIRQHQFNKVELVKFSLPENSYDELEKLTNDAESILQELELPYRVVALSTGDLGFSSAKT 332
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
DLE W P +RE+ SCSN D+Q+RR +R+ + + EK EFVH LN + A R
Sbjct: 333 YDLEVWLPSFNTYREISSCSNFEDFQARRANIRF--RRSLKEKPEFVHTLNGSGLAIGRT 390
Query: 339 ICAILETHQTETG-VRIPDCLRKFVPAVYV 367
+ AI+E +Q + G V IP L+ ++ Y+
Sbjct: 391 VAAIMENYQDKDGRVHIPKALQPYMGVEYI 420
>gi|385802053|ref|YP_005838456.1| serine--tRNA ligase [Gardnerella vaginalis HMP9231]
gi|333393647|gb|AEF31565.1| serine--tRNA ligase [Gardnerella vaginalis HMP9231]
Length = 428
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 193/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR----------------- 44
+LD+ R + V+++Q+ R ++VELVD+V+ D R
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIG 56
Query: 45 ------QFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
Q KA + K L KV K ++++ D +T N + P E
Sbjct: 57 KKVAAAQDSEKATLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSRAEHQKLLSMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL VR ++M + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR----ERMEDGGTRPVSTLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ E G + IP ++ ++
Sbjct: 397 NHQHEDGSIDIPKAMQAYM 415
>gi|448440462|ref|ZP_21588625.1| seryl-tRNA ligase [Halorubrum saccharovorum DSM 1137]
gi|445690358|gb|ELZ42573.1| seryl-tRNA ligase [Halorubrum saccharovorum DSM 1137]
Length = 456
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 195/445 (43%), Gaps = 99/445 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGE------KM 68
+PE VR+ ++ +V+L D++++ D +WR+ + + D+ +N S IG+ +
Sbjct: 10 NPEVVREALANKGVDVDL-DRILDVDEEWRELKSRGDDLRHERNEVSSKIGDLKQAGDEE 68
Query: 69 KAKEPVGDSSTLPG---------NHL---------------HPSVPVSNNEDENGIVRTK 104
A+E + S L + L SVPV +E EN R +
Sbjct: 69 AAQEAIERSQELKAELQEIEERADELEAELEASLLELPQIPQESVPVGEDESENVERRRE 128
Query: 105 GDTEVRKK----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW 160
G ++R+ H DL ++ +D E GA VAGG Y KG L+ L+Q+ L
Sbjct: 129 GFDDLRELPDDVEPHYDLGEDLEILDFERGAKVAGGGFYVAKGDGARLEHALIQFMLDVH 188
Query: 161 IEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIAT 220
E+GY ++ P + M+ QL +F E+ Y+V G E D DD +L+ T
Sbjct: 189 REQGYEDVFPPIPVNSASMRGTGQLPKFTEDAYRVEGTNEDEYDD-------DDLWLLPT 241
Query: 221 SEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----DLTKSIA--------------- 260
+E P+ +HRD L LP++Y + FRQE T+ I
Sbjct: 242 AEVPVTNLHRDEILLGEDLPLKYQAYTPNFRQEAGEHGTETRGIVRVHQFNKVEMVNFVR 301
Query: 261 -------------------------YRVVNIVSGALNHAAAKKLDLEAWFPG-------- 287
YR++ + +G L AKK D+E W P
Sbjct: 302 PEESDERFDGLVDEAEEVLRRLELPYRILEMCTGDLGFTQAKKYDIEVWAPADDMDEGPA 361
Query: 288 -SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G + E+ S SN D+Q+RR +RY ++ +E EF+H LN + A R++ AILE +
Sbjct: 362 EGGRWLEVSSVSNFEDFQARRAQIRY--REEHHESAEFLHTLNGSGLAVPRIVVAILEYY 419
Query: 347 QTETG-VRIPDCLRKFVPAVYVNEA 370
Q + G V +P+ LR ++ V E
Sbjct: 420 QNDDGTVTVPEALRPYMGGTEVIEG 444
>gi|397669142|ref|YP_006510677.1| serine--tRNA ligase [Propionibacterium propionicum F0230a]
gi|395143730|gb|AFN47837.1| serine--tRNA ligase [Propionibacterium propionicum F0230a]
Length = 423
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 188/447 (42%), Gaps = 101/447 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR----------------- 44
++D L RT DP+ VR++Q+ R +VELVD+++ D R
Sbjct: 1 MIDPKLLRT----DPDLVRRSQEARGDSVELVDELVSADEARRSGIATHDRLRAEQKELG 56
Query: 45 ------QFRHKADNFNKFKNLCSKVIGEKMK---AKEPVGDSSTLPGNHLHPSVPVSNNE 95
Q + + + K L + V + + A E + GN + VP E
Sbjct: 57 RLIPKAQGDERTELLARTKQLAADVKAAQEQSEAAGERFNELIMQLGNIVIDGVP-RGGE 115
Query: 96 DENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ ++ T G E + H++L + +D E G ++G R Y L G L+
Sbjct: 116 DDGLVIETVGVPRDFAAEGFEPKDHLELGEALGAIDMERGTKISGSRFYVLTGIGARLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A++K +E G+T + P ++ E M L Q +++Y +
Sbjct: 176 ALLNLAMTKAVEWGFTAMIPPALVKPEAMAGTGFLGQAAKDVYHL--------------- 220
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------ 258
DD YL+ TSE + A H D L SLP RY S CFR+E +
Sbjct: 221 STDDLYLVGTSEVALAAFHSDEILDADSLPRRYAAFSPCFRREAGSYGKDTRGIFRVHWF 280
Query: 259 ---------------------------------IAYRVVNIVSGALNHAAAKKLDLEAWF 285
I ++V+++ SG L +AA+K D AW
Sbjct: 281 DKVEMFIHCLPEDAEDWHQRLLGFEKEFLQALEIPFQVLDVASGDLGLSAARKYDCYAWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +RY + + E V LN T CA TR+I +LE
Sbjct: 341 PTQQRYREVTSTSNCTQFQARRLGIRY----RTEKGTEHVATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFVPAVYVNEAG 371
HQ G VR+P+ LR + + V AG
Sbjct: 397 HQQADGSVRVPEALRPHLGGLEVLTAG 423
>gi|187251906|ref|YP_001876388.1| seryl-tRNA synthetase [Elusimicrobium minutum Pei191]
gi|238065101|sp|B2KEV5.1|SYS_ELUMP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|186972066|gb|ACC99051.1| Seryl-tRNA synthetase [Elusimicrobium minutum Pei191]
Length = 424
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 192/439 (43%), Gaps = 101/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNV-ELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
+LD+ LF D E V+K+ R + LV ++ E + +++ +N +N
Sbjct: 1 MLDIKLF----ANDLEGVKKSLASRNPALLTLVGEITELNKTYKELLTSVENMRAKRNEL 56
Query: 61 SKVIGEKMKAKEPVGD----------------------------SSTLPG--NHLHPSVP 90
SK +G +K K+P S+T+ N PSV
Sbjct: 57 SKSVG-ILKQKDPAAAEEAMKEVSLIKTGMSEKENMLEEIKKKISNTMLNIPNMPDPSVT 115
Query: 91 VSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
+ +E +N +R G K H + + +D E A+++G R LKG L
Sbjct: 116 IGKDEKDNKEIRKDGAAPSFSFKPLDHHAVGEKLGILDFETAAVLSGSRFALLKGDGARL 175
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
+ L+ Y L K +KGYT + P + +E++ QL +F E++Y + G+ ++
Sbjct: 176 ERALISYMLDKHAKKGYTEVVPPSIVNEEILIGTGQLPKFREDMYALEGEPKQ------- 228
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
+LI+T+E P+ ++R L EA LP++ + CFR+E
Sbjct: 229 -------FLISTAEIPLTNMNRGKVLQEAELPVKLTAGTPCFRKEAGTYGKDTRGLIRNH 281
Query: 254 ----------------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEA 283
D+ K + AYR V + +G + ++AK D+E
Sbjct: 282 QFDKVELVMISNSNDSFNLLEAMTADAEDVLKGLGLAYRTVELCTGDMGFSSAKTYDIEV 341
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
W P +RE+ SCSNC +Q+RR+ +RY K KIEFVH LN + A R + AIL
Sbjct: 342 WMPSENKYREISSCSNCTSFQARRMNLRY---KNAEGKIEFVHTLNGSGVAVGRALAAIL 398
Query: 344 ETHQTETG-VRIPDCLRKF 361
E +Q E G V +P+ LR +
Sbjct: 399 ENYQQEDGSVIVPEALRPY 417
>gi|294784673|ref|ZP_06749961.1| serine--tRNA ligase [Fusobacterium sp. 3_1_27]
gi|294486387|gb|EFG33749.1| serine--tRNA ligase [Fusobacterium sp. 3_1_27]
Length = 424
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 191/447 (42%), Gaps = 108/447 (24%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
++L+L R + E +++ K+R NV++ D +E D K R+ + +N + +N
Sbjct: 3 IMLELKFMRE----NVEMLKEMLKNRNSNVDM-DTFVELDSKRREILSEVENLKRERNNV 57
Query: 61 SKVIGEKMKAK----------------------------EPVGDSSTLPGNHLHPSVPVS 92
S I K K E + D N H S P+
Sbjct: 58 SAEIANLKKEKKDANHLIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHSSTPIG 117
Query: 93 NNEDENGIVRTKGDTEVRKKY-----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+ED N +R G V KK+ SH D+ + +D E GA ++G R +G A
Sbjct: 118 PDEDYNLEIRKWG---VPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAAR 174
Query: 148 LQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + L +E+GYT TPF ++ EV + QL +F+E++YK
Sbjct: 175 LERALINFMLDVHTLEEGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTT---------- 224
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
DD YLI+TSE + +HR L ++ LP Y S CFR+E
Sbjct: 225 ------DDMYLISTSEITMTNIHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIR 278
Query: 254 --------------------DLTK------------SIAYRVVNIVSGALNHAAAKKLDL 281
+L K + YRV+ + SG L +AAK DL
Sbjct: 279 LHQFNKVEMVKITDAESSYDELEKMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDL 338
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W P +RE+ SCSNC +Q+RR+ ++Y ++ EF H LN + A R + A
Sbjct: 339 EVWLPSQNKYREISSCSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVA 394
Query: 342 ILETHQTETG-VRIPDCLRKFVPAVYV 367
I+E +Q E G IP L ++ V V
Sbjct: 395 IMENYQQEDGSFLIPKVLIPYMGGVDV 421
>gi|326390337|ref|ZP_08211896.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|325993614|gb|EGD52047.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 423
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 158/336 (47%), Gaps = 73/336 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIV 133
T+P N H SVP+ +++++N +R G+ +K+ H ++ + +D EA A V
Sbjct: 102 TIP-NIPHESVPIGDSDEDNVEIRRWGEP---RKFDFEPKPHWEIGEELGILDFEAAARV 157
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
G R F KG L+ L+ + L IEK GYT ++ PF + + M QL +F+E+
Sbjct: 158 TGSRFTFYKGLGARLERALINFMLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDA 217
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
+KV G D +LI T+E P+ ++RD+ + LPI + S CFRQ
Sbjct: 218 FKVYGT---------------DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQ 262
Query: 253 E--------------------DLTK-------------------------SIAYRVVNIV 267
E +L K + YRVV I
Sbjct: 263 EAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVAIC 322
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G L A+KK D+E W P G + E+ SCSNC D+Q+RR ++Y K K ++VH
Sbjct: 323 TGDLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHT 380
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R AILE +Q E G V IP+ LR ++
Sbjct: 381 LNGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|289765941|ref|ZP_06525319.1| seryl-tRNA synthetase [Fusobacterium sp. D11]
gi|289717496|gb|EFD81508.1| seryl-tRNA synthetase [Fusobacterium sp. D11]
Length = 424
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 194/456 (42%), Gaps = 114/456 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
++L+L R + E +++ K+R NV++ D +E D K R+ + +N + +N
Sbjct: 3 IMLELKFMRE----NVEMLKEMLKNRNSNVDM-DAFVELDSKRREVLSEVENLKRERNNV 57
Query: 61 SKVIGEKMKAK----------------------------EPVGDSSTLPGNHLHPSVPVS 92
S I K K E + D N HPS P+
Sbjct: 58 SAEIANLKKEKKDASHLIEKMGGVSAKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIG 117
Query: 93 NNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+E+ N +R G+ KK+S H D+ + +D E GA ++G R +G A
Sbjct: 118 PDENYNLEIRKWGEP---KKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAAR 174
Query: 148 LQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + L +E+GYT TPF ++ EV + QL +F+E++YK
Sbjct: 175 LERALINFMLDVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTT---------- 224
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
DD YLI+TSE + +HR L ++ LP Y S CFR+E
Sbjct: 225 ------DDMYLISTSEITMTNIHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIR 278
Query: 254 --------------------DLTK------------SIAYRVVNIVSGALNHAAAKKLDL 281
+L K + YRV+ + SG L +AAK DL
Sbjct: 279 VHQFNKVEMVKITDAESSYDELEKMVKNAETILQRLELPYRVIQLCSGDLGFSAAKTYDL 338
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W P +RE+ SCSNC +Q+RR+ ++Y ++ EF H LN + A R + A
Sbjct: 339 EVWLPSQNKYREISSCSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVA 394
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
I+E +Q E G + VP V + G + +K
Sbjct: 395 IMENYQQEDGSFL-------VPKVLIPYMGGVDVIK 423
>gi|384200815|ref|YP_005586562.1| seryl-tRNA synthase [Bifidobacterium longum subsp. longum KACC
91563]
gi|338753822|gb|AEI96811.1| seryl-tRNA synthase [Bifidobacterium longum subsp. longum KACC
91563]
Length = 428
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 192/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
+LD+ R + V+++Q+ R ++VELVD+V+ +D R+
Sbjct: 1 MLDIQFIREH----TDIVKESQRKRGESVELVDEVLSSDTARREALKAFEEARAQQKEIG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA + K L KV K KA + +T N + P P E
Sbjct: 57 KKVASAPADEKAKLIAETKELSQKVSEYKSKADSAAEEYTTAMWKLSNIVEPEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G V G R YFL+G +Q+
Sbjct: 116 DDYVVVKKVGQIRDFAAEGFEPKDHLILGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H + L + P+RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 ----------QEDLTK----------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QED K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYAKQEDSYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL +R ++M + V LN T ATTR + AI+E
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNIR----ERMEDGGTRPVSTLNGT-LATTRWLVAIME 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ + G + IP +R ++
Sbjct: 397 NHQQKDGSIEIPKAMRAYM 415
>gi|152973866|ref|YP_001373383.1| seryl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
gi|189083557|sp|A7GJT0.1|SYS_BACCN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|152022618|gb|ABS20388.1| seryl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 424
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 151/329 (45%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N +VRT G+ K+++ H DL T + VD E V G R F
Sbjct: 109 HESTPVGETEDDNVVVRTWGEV---KEFNFEPKPHWDLATDLGIVDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E+ GY + P+ + + M QL +F+E+ + +
Sbjct: 166 YKGAGARLERALISFMLDLHTEEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFLI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILSAEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEESYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWLPSYDTYREISSCSNFEAFQARRANIRF--RREPNAKPEPVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|111115050|ref|YP_709668.1| seryl-tRNA synthetase [Borrelia afzelii PKo]
gi|384206724|ref|YP_005592445.1| seryl-tRNA synthetase [Borrelia afzelii PKo]
gi|123341391|sp|Q0SNT6.1|SYS_BORAP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|110890324|gb|ABH01492.1| seryl-tRNA synthetase [Borrelia afzelii PKo]
gi|342856607|gb|AEL69455.1| seryl-tRNA synthetase [Borrelia afzelii PKo]
Length = 425
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 160/336 (47%), Gaps = 69/336 (20%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
N L P VP+ N+E++N ++ G K H++L +D +D + V+G + Y+
Sbjct: 104 NILSPDVPIGNSEEDNFEIKKVGIIPRFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYY 163
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LK AV L++ L+ ++L+K EKG+ TP +VA+ E + IG
Sbjct: 164 LKNEAVFLEIALINFSLNKLREKGFNVFITP---------DVAR-----EFIVDGIGFNP 209
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----DL 255
+ +S K E DKYL+ TSE + + + + + +LPI+ G S CFR+E L
Sbjct: 210 RGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAGAYGQL 268
Query: 256 TKS----------------------------------------IAYRVVNIVSGALNHAA 275
+K I YRV+NI S L A
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKAEESSIIHDEFLSIQEQIFTELEIPYRVLNICSFDLGSPA 328
Query: 276 AKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
KK D+EAW PG G + E+ S SNC DYQSRRL +RY N +F HM+N TA
Sbjct: 329 YKKYDIEAWMPGRDGKGGYGEITSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNGTA 385
Query: 333 CATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
ATTRVI +ILE Q E GV+IP L K+ Y+
Sbjct: 386 IATTRVIISILENFQDEKGGVKIPKSLVKYTGFDYI 421
>gi|333895889|ref|YP_004469763.1| seryl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111154|gb|AEF16091.1| Seryl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 423
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 157/336 (46%), Gaps = 73/336 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDT-----EVRKKYSHVDLITMIDGVDSEAGAIV 133
T+P N H SVPV +++ +N +R GD EV+ H D+ + +D EA + V
Sbjct: 102 TIP-NIPHESVPVGDSDADNVEIRRWGDVREFDFEVK---PHWDIGVELGLLDFEAASRV 157
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
G R F KG L+ L+ + + EK GYT ++ PF + + M QL +F+E+
Sbjct: 158 TGSRFTFYKGLGCRLERALINFMMDLHTEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDA 217
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
+KV G D +LI T+E P+ ++R++ + LPI S CFRQ
Sbjct: 218 FKVAGT---------------DYFLIPTAEVPVTNMYRETIIDSEKLPIYNCAYSACFRQ 262
Query: 253 E-------------------------------------------DLTKS--IAYRVVNIV 267
E D+ K+ I YRVV+I
Sbjct: 263 EAGSAGRDTRGLIRQHQFNKVELVKITEPEKSYEELEKMVSDAEDVLKTLGIPYRVVSIC 322
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G L AAKK DLE W P G + E+ SCSNC D+Q+RR ++Y K K ++VH
Sbjct: 323 TGDLGFTAAKKYDLEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHT 380
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R AILE +Q + G V +P+ LR ++
Sbjct: 381 LNGSGVAVGRTFAAILENYQQKDGSVVVPEALRPYM 416
>gi|302871467|ref|YP_003840103.1| seryl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302574326|gb|ADL42117.1| seryl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 420
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 198/441 (44%), Gaps = 107/441 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL R +PEKV++ R K++ + ++E D K R+ + ++ +N S
Sbjct: 1 MLDLKYIR----ANPEKVQEGLSKRNKDISIA-PILELDEKRRKLLAEVESLKALQNQKS 55
Query: 62 KVIGE-KMKAKEPVG---------------DSS-------------TLPGNHLHPSVPVS 92
K + + K + K+ G DS T+P N H SVPV
Sbjct: 56 KEVPKLKKEGKDVTGLMNELKELSDKIKELDSKVKDVEDEIEKILLTIP-NIPHESVPVG 114
Query: 93 NNEDENGIVRTKGDTEVRKK----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
++ EN VR G EVR+ H ++ + +D E + V+G R F +G L
Sbjct: 115 KDDTENVEVRRWG--EVREPDFIIKPHWEIGVNLGILDFERASKVSGSRFTFYRGLGARL 172
Query: 149 QVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
+ L+ + L IEK GYT L+ PF + ++ M QL +F+E+ +K
Sbjct: 173 ERALINFMLDLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTT----------- 221
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------- 253
DD +LI T+E P+ HR+ L E LPI+Y+ S CFR E
Sbjct: 222 -----DDYFLIPTAEVPVTNYHREEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQ 276
Query: 254 ------DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLE 282
+L K + YRVV + SG L ++AK D+E
Sbjct: 277 HQFNKVELVKFAKPEDSYDELEKLTADAEDVLRELGLPYRVVLLCSGDLGFSSAKTYDIE 336
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
W P G + E+ SCSN YQ+RR +R+ ++ + K+++VH LN + A R + AI
Sbjct: 337 VWMPSYGRYVEISSCSNFESYQARRANIRF---RRKDGKLDYVHTLNGSGLAVGRTLAAI 393
Query: 343 LETHQTETG-VRIPDCLRKFV 362
LE Q + G V +P+ LR+++
Sbjct: 394 LENFQQKDGTVVVPEVLRRYM 414
>gi|384083437|ref|ZP_09994612.1| seryl-tRNA synthetase [gamma proteobacterium HIMB30]
Length = 431
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 153/330 (46%), Gaps = 70/330 (21%)
Query: 88 SVPVSNNEDENGIVRTKGDTEVRKK------YSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
SVP +ED+N V G RK H+++ + G+D + A ++G R +
Sbjct: 112 SVPEGTSEDDNVEVSVVG----RKPEFGFAIRDHIEIGELFSGLDFDRAAQLSGSRFVTI 167
Query: 142 KGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
G L L+QY L E+ GY Y P + +++ QL +F ++L+++
Sbjct: 168 HGAFAKLHRALIQYMLDLHTEQHGYAETYVPLLVDGSILEGTGQLPKFKDDLFRI----- 222
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS-- 258
APE ++YLI T+E P+ + RDS + +SLP++Y+ + CFR E +
Sbjct: 223 -----APEDGGGRERYLIPTAEVPLTNLVRDSIVDASSLPLQYVAHTPCFRAEAGSYGRD 277
Query: 259 -------------------------------------------IAYRVVNIVSGALNHAA 275
+ YRVV++ G L +A
Sbjct: 278 VRGMFRQHQFDKVELVWITHPEKSWEALEALRAHAEAVLKGLDLHYRVVDLCGGDLGFSA 337
Query: 276 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACAT 335
AK DLE W PG FRE+ SCSNCLD+QSRR+ R+ + N K E VH LN + A
Sbjct: 338 AKTYDLEVWLPGQDQFREISSCSNCLDFQSRRMQARF---RNDNGKPELVHTLNGSGVAI 394
Query: 336 TRVICAILETHQTETG-VRIPDCLRKFVPA 364
R + A++E +Q E G + +P+ L+ ++ A
Sbjct: 395 GRCLIAVIENYQNEDGSITVPEALKPYIKA 424
>gi|448474575|ref|ZP_21602434.1| seryl-tRNA ligase [Halorubrum aidingense JCM 13560]
gi|445817882|gb|EMA67751.1| seryl-tRNA ligase [Halorubrum aidingense JCM 13560]
Length = 456
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 198/437 (45%), Gaps = 99/437 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGE-------- 66
+PE VR+ ++ +V+L D++++ D +WR+ + + D+ +N S IGE
Sbjct: 10 NPEVVREALANKGVDVDL-DRILDVDEEWRELKQRGDDLRHERNEVSSKIGELKAAGEEA 68
Query: 67 ----------KMKAK-----------EPVGDSSTLPGNHL-HPSVPVSNNEDENGIVRTK 104
++KA+ E + S L + H SVPV +E EN R +
Sbjct: 69 EAQEAIERSQELKAELQDIEDRADELEAELEQSLLELPQIPHESVPVGADESENVERRRE 128
Query: 105 GDTEVRKK----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW 160
G + R+ H DL ++ +D E GA VAGG Y KG L+ L+Q+ L
Sbjct: 129 GFDDRRELPDDVIPHYDLGEELEILDFERGAKVAGGGFYVAKGDGARLEHALIQFMLDVH 188
Query: 161 IEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIAT 220
E+ Y ++ P + + M+ QL +F E+ Y++ G E+ P +D DD +L+ T
Sbjct: 189 REQDYHDVFPPIPVNSDSMRGTGQLPKFTEDAYRIEGTNEE-----PYED--DDLWLLPT 241
Query: 221 SEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----DLTKSIA--------------- 260
+E P+ +HRD L LP++Y + FRQE T+ I
Sbjct: 242 AEVPVTNLHRDEILLGEDLPLKYQAYTPNFRQEAGEHGTETRGIVRVHQFNKVEMVNFVR 301
Query: 261 -------------------------YRVVNIVSGALNHAAAKKLDLEAWFPG-------- 287
YRV+ + +G L AKK DLE W PG
Sbjct: 302 PEESEERFEGLVDEAEEVLRRLELPYRVLEMCTGDLGFTQAKKYDLEVWAPGDDMDEGPE 361
Query: 288 -SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G + E+ S SN D+Q+RR +R+ ++ +E E++H LN + A R++ AILE +
Sbjct: 362 EGGRWLEVSSVSNFEDFQARRAGIRF--REEHHESAEYLHTLNGSGLAVPRIVVAILEYY 419
Query: 347 QTETG-VRIPDCLRKFV 362
Q + G V +P+ LR ++
Sbjct: 420 QNDDGTVTVPEALRPYM 436
>gi|421144825|ref|ZP_15604730.1| seryl-tRNA synthetase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
gi|395488792|gb|EJG09642.1| seryl-tRNA synthetase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
Length = 421
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 184/431 (42%), Gaps = 104/431 (24%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAK----- 71
E +++ K+R NV++ D +E D K R+ + +N + +N S I K K
Sbjct: 12 EMLKEMLKNRNSNVDM-DTFVELDSKRREILSEVENLKRERNNVSAEIANLKKEKKDANH 70
Query: 72 -----------------------EPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTE 108
E + D N H S P+ +ED N +R G
Sbjct: 71 LIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHSSTPIGPDEDYNLEIRKWG--- 127
Query: 109 VRKKY-----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS-KWIE 162
V KK+ SH D+ + +D E GA ++G R +G A L+ L+ + L +E
Sbjct: 128 VPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAARLERALINFMLDVHTLE 187
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSE 222
+GYT TPF ++ EV + QL +F+E++YK DD YLI+TSE
Sbjct: 188 EGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTT----------------DDMYLISTSE 231
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------------------- 253
+ +HR L ++ LP Y S CFR+E
Sbjct: 232 ITMTNIHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAE 291
Query: 254 ----DLTK------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
+L K + YRV+ + SG L +AAK DLE W P +RE+ SC
Sbjct: 292 SSYDELEKMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSC 351
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPD 356
SNC +Q+RR+ ++Y ++ EF H LN + A R + AI+E +Q E G IP
Sbjct: 352 SNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLIPK 407
Query: 357 CLRKFVPAVYV 367
L ++ V V
Sbjct: 408 VLIPYMGGVDV 418
>gi|403728030|ref|ZP_10947908.1| serine--tRNA ligase [Gordonia rhizosphera NBRC 16068]
gi|403203673|dbj|GAB92239.1| serine--tRNA ligase [Gordonia rhizosphera NBRC 16068]
Length = 418
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 131/284 (46%), Gaps = 65/284 (22%)
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
+D E GA V+G R YFL GP LQ+GL+ A K + G+T + P +R E+M
Sbjct: 146 IDMERGAKVSGSRFYFLTGPGAMLQLGLLTMAAQKAVANGFTLMVPPVLVRPEIMSGTGF 205
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 244
L +E+Y + E DD YL+ TSE P+ H D L +S P+RY
Sbjct: 206 LGAHSDEIYHL---------------EEDDLYLVGTSEVPLAGYHSDEILDLSSGPLRYA 250
Query: 245 GVSTCFRQEDLTKS---------------------------------------------I 259
G S+CFR+E + +
Sbjct: 251 GWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAHTEHQKLLAWEKEMLAAIDV 310
Query: 260 AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMN 319
YRV+++ G L +AA+K D EAW P +REL S SNC +Q+RRL +RY + +
Sbjct: 311 PYRVIDVAGGDLGSSAARKFDCEAWVPTQNTYRELTSTSNCTTFQARRLSIRY---RDES 367
Query: 320 EKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
K + LN T ATTR + AILE HQ G V++P L +FV
Sbjct: 368 GKPQVAATLNGT-LATTRWLVAILENHQQPDGSVKLPPELARFV 410
>gi|393758499|ref|ZP_10347320.1| seryl-tRNA ligase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393164918|gb|EJC64970.1| seryl-tRNA ligase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 448
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 158/341 (46%), Gaps = 59/341 (17%)
Query: 78 STLPGNHLHPSVPVSNNEDENGIVR--TKGDTEVRKKYSHV-----DLITMID--GVDSE 128
+T+P N H SVPV +E++N VR G + + K +H+ D + + + G+D E
Sbjct: 101 ATIP-NLPHESVPVGESEEDNVEVRRWIPGPKDEQGKPAHITFEPRDHVDLGEKLGLDFE 159
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQ 187
+ +AG R L+GP L L Q+ L + E GYT YTP+ + + QL +
Sbjct: 160 SARKLAGARFMVLRGPLARLHRALAQFMLDTQVQEHGYTECYTPYIVNASTLYGTGQLPK 219
Query: 188 FDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVS 247
F ++++ V G+ + P + + +D YLI+TSE + + RD L +LP+R S
Sbjct: 220 FKDDMFWVTKGGQDNEPADPAESKPEDLYLISTSEISLTGMVRDEILAGDALPMRLTAHS 279
Query: 248 TCFRQEDLTKS---------------------------------------------IAYR 262
CFR E + + YR
Sbjct: 280 PCFRSEAGSGGRDTRGVIRQHQFDKVEMVQIVHPEKSYEALEAMVGHAEHVLQALELPYR 339
Query: 263 VVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKI 322
VV + +G + +AAK DLE W P FRE+ S SNC +Q+RRL R+ K +
Sbjct: 340 VVQLCTGDMGFSAAKTYDLEVWLPAQDTFREISSVSNCEAFQARRLQARFRADSKA--RP 397
Query: 323 EFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
EFVH LN + A R + A+LE HQ E G V +P LR ++
Sbjct: 398 EFVHTLNGSGLAVGRALVAVLENHQQEDGSVIVPKVLRPYM 438
>gi|228905813|ref|ZP_04069712.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 200]
gi|228853821|gb|EEM98579.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 200]
Length = 424
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 151/329 (45%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N RT G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVEARTWGEV---KEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|311114299|ref|YP_003985520.1| serine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
gi|415713492|ref|ZP_11465196.1| seryl-tRNA synthetase [Gardnerella vaginalis 55152]
gi|310945793|gb|ADP38497.1| serine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
gi|388055751|gb|EIK78638.1| seryl-tRNA synthetase [Gardnerella vaginalis 55152]
Length = 428
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 193/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR----------------- 44
+LD+ R + V+++Q+ R ++VELVD+V+ D R
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIG 56
Query: 45 ------QFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
Q KA + K L KV K ++++ D +T N + P E
Sbjct: 57 KKVAAAQDSEKATLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSRAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL VR ++M + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR----ERMEDGGTRPVSTLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ E G + IP ++ ++
Sbjct: 397 NHQHEDGSIDIPKAMQAYM 415
>gi|336399924|ref|ZP_08580721.1| seryl-tRNA synthetase [Fusobacterium sp. 21_1A]
gi|336161127|gb|EGN64137.1| seryl-tRNA synthetase [Fusobacterium sp. 21_1A]
Length = 421
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 187/440 (42%), Gaps = 110/440 (25%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAK----- 71
E +++ K+R NV++ D +E D K R+ + +N + +N S I K K
Sbjct: 12 EMLKEMLKNRNSNVDM-DAFVELDSKRREVLSEVENLKRERNNVSAEIANLKKEKKDASH 70
Query: 72 -----------------------EPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTE 108
E + D N HPS P+ +E+ N +R G+
Sbjct: 71 LIEKMGGVSAKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIGPDENYNLEIRKWGEP- 129
Query: 109 VRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS-KWIE 162
KK+S H D+ + +D E GA ++G R +G A L+ L+ + L +E
Sbjct: 130 --KKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALINFMLDVHTLE 187
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSE 222
+GYT TPF ++ EV + QL +F+E++YK DD YLI+TSE
Sbjct: 188 EGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTT----------------DDMYLISTSE 231
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------------------- 253
+ +HR L ++ LP Y S CFR+E
Sbjct: 232 ITMTNIHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDAE 291
Query: 254 ----DLTK------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
+L K + YRV+ + SG L +AAK DLE W P +RE+ SC
Sbjct: 292 SSYDELEKMVKNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSC 351
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDC 357
SNC +Q+RR+ ++Y ++ EF H LN + A R + AI+E +Q E G +
Sbjct: 352 SNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFL--- 404
Query: 358 LRKFVPAVYVNEAGEIPFVK 377
VP V + G + +K
Sbjct: 405 ----VPKVLIPYMGGVDVIK 420
>gi|410656651|ref|YP_006909022.1| Seryl-tRNA synthetase [Dehalobacter sp. DCA]
gi|410659629|ref|YP_006912000.1| Seryl-tRNA synthetase [Dehalobacter sp. CF]
gi|409019006|gb|AFV01037.1| Seryl-tRNA synthetase [Dehalobacter sp. DCA]
gi|409021985|gb|AFV04015.1| Seryl-tRNA synthetase [Dehalobacter sp. CF]
Length = 421
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 195/445 (43%), Gaps = 104/445 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL R+ +PE V++ R ++ L D + + K RQ +A+N +N S
Sbjct: 1 MLDLKFVRS----NPEIVKEALAKRCADINL-DDFLRQEEKRRQILFEAENLKAERNKVS 55
Query: 62 KVIGEKMKAKE----------PVG-------------DSSTLPGNHLHP-----SVPVSN 93
+ + + K+ + VG + L +L P SVPV
Sbjct: 56 EEVARRKKSGQDAEELILQMREVGQNIKTLDDSLNEIEQKMLEVLYLIPNIPDASVPVGK 115
Query: 94 NEDENGIVRTKGDTEVRKKY-----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
+E++N VR G +K+ +H +L +D +D V G R F KG L
Sbjct: 116 DENDNIQVRKWGKP---RKFEFQPLAHYELGEKLDILDFARAGKVTGTRFTFYKGLGARL 172
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
+ L+ + + + KGYT ++ PF + ++ M QL +F+E+ +KV
Sbjct: 173 ERALINFMMDRHAAKGYTEVFPPFMVNRQSMFSTGQLPKFEEDAFKV------------- 219
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
E D +LI T+E P+ ++RD L LPI++ S CFR E
Sbjct: 220 --EKTDYFLIPTAEVPVTNIYRDEILEADMLPIKFCAYSACFRAEAGASGRDTRGLIRQH 277
Query: 254 -----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEA 283
+L K ++YRV+ + +G L ++AK D+E
Sbjct: 278 QFNKVELVKFSFPENSFQELEMLTADAEAILQELELSYRVIALSTGDLGFSSAKTYDIEV 337
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
W P +RE+ SCSN D+Q+RR +R+ + K EK EFVH LN + A R + AIL
Sbjct: 338 WLPSFNLYREISSCSNFNDFQARRANIRFRRGPK--EKPEFVHTLNGSGLAIGRTVSAIL 395
Query: 344 ETHQTETG-VRIPDCLRKFVPAVYV 367
E +Q E G +RIP L ++ ++
Sbjct: 396 ENYQEEDGRIRIPKALVPYMGTEFI 420
>gi|18313866|ref|NP_560533.1| seryl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
gi|30173195|sp|Q8ZTP4.1|SYS_PYRAE RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|18161431|gb|AAL64715.1| seryl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
Length = 451
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 190/444 (42%), Gaps = 115/444 (25%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNF---------------------- 53
P+ VRK R + LVDK +E D KWR+ + + D
Sbjct: 13 PDVVRKVLTARRMDASLVDKFLELDEKWRRLKKEVDELRHEYNKLSKEGAKAPPERRREI 72
Query: 54 -NKFKNLCSKV------IGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDEN------GI 100
+K + L +++ + E +A+E V + P N +H SVP+ ++ G+
Sbjct: 73 ADKARELAARLERAEKELEETERAREEV--LWSFP-NLIHESVPICPEGVDSIPVRHWGV 129
Query: 101 VRTKGDTE------------VRKKYSHVDLI-TMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
V+T D + H D+ ++ D+ VAG R Y+L V
Sbjct: 130 VKTTKDVVDKLDKGVDYLVVEKAPVGHADMAEVVLKMADTLKAGEVAGSRFYYLFDDLVW 189
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L L YAL +KG+ P+ P+ ++ ++++ V F + +YK+ G
Sbjct: 190 LDFALAMYALDYLAQKGFRPVIPPYMLKYDLIRRVLDFDTFKDAIYKIDG---------- 239
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------- 253
+D YLIAT+E I A L E LP Y+G S CFR+E
Sbjct: 240 -----EDLYLIATAEHGIAAYLYKRELLEEELPQLYVGWSPCFRKEAGAGSRDIKGIFRV 294
Query: 254 ----------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLE 282
++TK+ + YRVVNI + L AAKK D+E
Sbjct: 295 HIFHKVEQFVFSLPEDSWKWHEEITKNTEELIRGLGLPYRVVNICAHDLGAPAAKKYDIE 354
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
W+P G +REL SCSN D+QS RL +R + K E+VH LN T ATTR I AI
Sbjct: 355 VWYPSQGMYRELASCSNVTDWQSYRLGIR---VTRKGMKREYVHTLNCTGLATTRTITAI 411
Query: 343 LETHQTETG-VRIPDCLRKFVPAV 365
LE Q E G V IP LR+++ +
Sbjct: 412 LENFQREDGAVEIPKVLRQYLEPI 435
>gi|258544668|ref|ZP_05704902.1| serine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
gi|258520086|gb|EEV88945.1| serine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
Length = 426
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 158/337 (46%), Gaps = 67/337 (19%)
Query: 78 STLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRK--KYSHVDLITMIDGVDSEAGAIVAG 135
+T+P N H SVPV +ED+N VR G V H DL + G+D +AGA +AG
Sbjct: 101 ATVP-NPPHESVPVGKDEDDNLEVRRWGTPRVFDFPPKEHADLENI--GLDFDAGAKLAG 157
Query: 136 GRGYFLKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYK 194
R L+G L + Q+ L ++GYT +Y P+ + + QL +F+E+L+K
Sbjct: 158 ARFTVLRGDLARLHRAIAQFMLDTHTRDEGYTEMYVPYLANAQALFGTGQLPKFEEDLFK 217
Query: 195 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE- 253
GE+ YLI TSE + + DS L EA LP+ Y + CFR E
Sbjct: 218 T-ALGER------------HFYLIPTSEVSLTNLVADSVLEEADLPLYYTAHTPCFRSEA 264
Query: 254 -------------------DLTKSIA-------------------------YRVVNIVSG 269
++ K +A YRVV + +G
Sbjct: 265 GSHGRDVRGMIRQHQFDKVEMVKIVAPETSYDELEKLTANAENILQKLNLPYRVVLLCTG 324
Query: 270 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLN 329
+ +AAK DLE W PG G +RE+ SCSNC D+Q+RR+ RY K ++K + VH LN
Sbjct: 325 DMGFSAAKTYDLEVWLPGQGKYREISSCSNCTDFQARRMQARY--RPKDSKKPQPVHTLN 382
Query: 330 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
+ A R + AILE +Q G + IP+ L ++ +
Sbjct: 383 GSGLAVGRTLVAILENYQNADGSITIPEALLPYMGGI 419
>gi|415716278|ref|ZP_11466305.1| seryl-tRNA synthetase [Gardnerella vaginalis 1400E]
gi|388057540|gb|EIK80369.1| seryl-tRNA synthetase [Gardnerella vaginalis 1400E]
Length = 428
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 193/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR----------------- 44
+LD+ R + V+++Q+ R ++VELVD+V+ D R
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIG 56
Query: 45 ------QFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
Q KA + K L KV K ++++ D +T N + P E
Sbjct: 57 KKVAAAQDSEKATLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSRAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL VR ++M + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR----ERMEDGGTRPVSTLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ E G + IP ++ ++
Sbjct: 397 NHQHEDGSIDIPRAMQAYM 415
>gi|86609248|ref|YP_478010.1| seryl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123501982|sp|Q2JKN4.1|SYS_SYNJB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|86557790|gb|ABD02747.1| seryl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 435
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 192/452 (42%), Gaps = 105/452 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL L R PE+VR+ ++R V+L D +++ D + RQ + + N
Sbjct: 1 MLDLKLLRDR----PEQVRQALQNRRATVDL-DGILQLDRERRQLETRKGSLQAESNSLG 55
Query: 62 KVIGEKMK-AKEPVGDS--------------------------------STLPGNHLHPS 88
K +GE ++ +P G N PS
Sbjct: 56 KKVGEIIRQGADPQGPEVAALRQRGVDLKAEIAQLEQQERELEEEIRARLLTLPNLPLPS 115
Query: 89 VPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
VPV +E +N VR G+ E++ + H ++ + ++ VA R + G
Sbjct: 116 VPVGRDEADNVEVRRWGE-ELKPAHPVLPHDEIAEKLGLLEIGRAVKVAQSRFVAMVGAG 174
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
L+ L+ L + I GYT + PF + +Q QL +F E+ ++
Sbjct: 175 AALERALIAMMLERHIAAGYTEVIPPFLVNSAALQGTGQLPKFAEDSFRCAD-------- 226
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
DD +LI T+E P+ ++RD +P SLP+ + + CFR+E
Sbjct: 227 -------DDLWLIPTAEVPLTNLYRDEMIPAESLPLYFCAYTPCFRREAGSYGRDTKGLI 279
Query: 254 --------DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLD 280
+L K + YRVV + SG L AAA+ D
Sbjct: 280 RLHQFQKVELVKVTRPDQSEAEHEKLVQDAEAILQMLELPYRVVELCSGDLGFAAARCFD 339
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
LE WFP +RE+ SCSNC D+Q+RR +RY + + + +FVH LN + A R +
Sbjct: 340 LEVWFPSQNQYREISSCSNCWDFQARRANLRYKEAGQ--KGTQFVHTLNGSGLAVGRSLA 397
Query: 341 AILETHQTETG-VRIPDCLRKFVPAVYVNEAG 371
A+LE HQ G +RIP LR F+ + +++E G
Sbjct: 398 ALLENHQQPDGSIRIPKALRPFLSSRFLSEDG 429
>gi|383788736|ref|YP_005473305.1| seryl-tRNA synthetase [Caldisericum exile AZM16c01]
gi|381364373|dbj|BAL81202.1| seryl-tRNA synthetase [Caldisericum exile AZM16c01]
Length = 424
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 196/441 (44%), Gaps = 105/441 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD +L R + PE V++ K++ + LVDK +E D K R+ DN + S
Sbjct: 1 MLDPNLIREK----PEIVKEGIKNKGGDPTLVDKFLEVDKKRRELVKDIDNLRHTRKELS 56
Query: 62 KVIGEKMKAKEPVGDSS-----------------------------TLPGNHLHPSVPVS 92
+ IG K+K E V ++P N HPSVPV
Sbjct: 57 ESIGRKLKQGEQVDGVRAEVRKLGEEINQKEKELENVEKIYKEILLSIP-NLPHPSVPVG 115
Query: 93 NNEDENGIVRTKGDTEVRK----KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
+E EN ++R +G ++R+ H ++ + +D + ++G R Y L G L
Sbjct: 116 KDETENVVLRKEG--KIREFNFPPKPHWEIAEALGLIDFKRAVKISGSRFYVLTGLGAKL 173
Query: 149 QVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
+ L+ + + IE GY ++ PF + ++ M QL +F E++YK+ G
Sbjct: 174 ERALISFMIDYHIEHHGYKEIFPPFLINRDSMIGTGQLPKFAEDMYKIEG---------- 223
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ--------------- 252
++ YL T+E P+ +HRD L E+ LPI+Y+ + CFR+
Sbjct: 224 -----EELYLDPTAEVPVTNLHRDEILNESDLPIKYVAYTACFRKEAGAAGKDTRGIIRV 278
Query: 253 ----------------------------EDLTKS--IAYRVVNIVSGALNHAAAKKLDLE 282
ED+ ++ + Y++ + +G L AA K D E
Sbjct: 279 HQFNKVEMVRFTKPEESYKNLYELLDNAEDILRALELPYQIKMMCTGDLGFTAAMKFDPE 338
Query: 283 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAI 342
+ P + E+ S SN D+Q+RR ++Y + + +++FVH LN + A R + AI
Sbjct: 339 VYMPAQEKYVEISSVSNFEDFQARRANIKY---RTNDGELKFVHTLNGSGLAVGRTMAAI 395
Query: 343 LETHQTETG-VRIPDCLRKFV 362
LE +Q E G V IP L+K++
Sbjct: 396 LENYQNEDGSVSIPKVLQKYM 416
>gi|256751428|ref|ZP_05492306.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749647|gb|EEU62673.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 423
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 158/336 (47%), Gaps = 73/336 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIV 133
T+P N H SVP+ +++++N +R G+ +K+ H ++ + +D EA A V
Sbjct: 102 TIP-NIPHESVPIGDSDEDNVEIRRWGEP---RKFDFEPKPHWEIGEELGILDFEAAARV 157
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
G R F KG L+ L+ + L IEK GYT ++ PF + + M QL +F+E+
Sbjct: 158 TGSRFTFYKGLGARLERALINFMLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDA 217
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
+KV G D +LI T+E P+ ++RD+ + LPI + S CFRQ
Sbjct: 218 FKVYGT---------------DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQ 262
Query: 253 E--------------------DLTK-------------------------SIAYRVVNIV 267
E +L K + YRVV I
Sbjct: 263 EAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVVIC 322
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G L A+KK D+E W P G + E+ SCSNC D+Q+RR ++Y K K ++VH
Sbjct: 323 TGDLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHT 380
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R AILE +Q E G V IP+ LR ++
Sbjct: 381 LNGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|335050297|ref|ZP_08543267.1| serine--tRNA ligase [Propionibacterium sp. 409-HC1]
gi|342211538|ref|ZP_08704263.1| serine--tRNA ligase [Propionibacterium sp. CC003-HC2]
gi|333769960|gb|EGL47039.1| serine--tRNA ligase [Propionibacterium sp. 409-HC1]
gi|340767082|gb|EGR89607.1| serine--tRNA ligase [Propionibacterium sp. CC003-HC2]
Length = 424
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 190/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
++D L RT DP+ VR++Q R ++ +VD V+ D R+
Sbjct: 1 MIDPKLLRT----DPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ ++ K + +V K A E + L GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E + H+++ + +D E G ++G R Y L G L+
Sbjct: 116 DEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 --DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 254 --------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D + I ++V+++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +R+ + + +E + LN T CA TR+I +LE
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VRIP+ LR ++
Sbjct: 397 HQQADGSVRIPEALRPYL 414
>gi|415702578|ref|ZP_11458724.1| seryl-tRNA synthetase [Gardnerella vaginalis 284V]
gi|388053124|gb|EIK76115.1| seryl-tRNA synthetase [Gardnerella vaginalis 284V]
Length = 428
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 193/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR----------------- 44
+LD+ R + V+++Q+ R ++VELVD+V+ D R
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIG 56
Query: 45 ------QFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
Q KA + K L KV K ++++ D +T N + P E
Sbjct: 57 KKVAAAQDSEKATLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFTAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEYGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSHAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL VR ++M + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR----ERMEDGGTRPVSTLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ E G + IP ++ ++
Sbjct: 397 NHQHEDGSIDIPKAMQAYM 415
>gi|282854499|ref|ZP_06263835.1| serine--tRNA ligase [Propionibacterium acnes J139]
gi|386070407|ref|YP_005985303.1| seryl-tRNA synthetase [Propionibacterium acnes ATCC 11828]
gi|422467043|ref|ZP_16543600.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA4]
gi|422470543|ref|ZP_16547063.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA3]
gi|422577215|ref|ZP_16652751.1| seryl-tRNA synthetase [Propionibacterium acnes HL001PA1]
gi|282582360|gb|EFB87741.1| serine--tRNA ligase [Propionibacterium acnes J139]
gi|314921979|gb|EFS85810.1| seryl-tRNA synthetase [Propionibacterium acnes HL001PA1]
gi|314980741|gb|EFT24835.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA3]
gi|315090940|gb|EFT62916.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA4]
gi|353454773|gb|AER05292.1| seryl-tRNA synthetase [Propionibacterium acnes ATCC 11828]
Length = 424
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 190/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
++D L RT DP+ VR++Q R ++ +VD V+ D R+
Sbjct: 1 MIDPKLLRT----DPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEP---VGDSSTLPGNHLHPSVPVSNNE 95
KA+ ++ K + +V K A E D + GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLSRTKTISGEVADLKKAADEADAKFTDIAKTLGNVVIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E + H+++ + +D E G ++G R Y L G L+
Sbjct: 116 DEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 --DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 254 --------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D + I ++V+++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +R+ + + +E + LN T CA TR+I +LE
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VRIP+ LR ++
Sbjct: 397 HQQADGSVRIPEALRPYL 414
>gi|237743593|ref|ZP_04574074.1| seryl-tRNA synthetase [Fusobacterium sp. 7_1]
gi|229432624|gb|EEO42836.1| seryl-tRNA synthetase [Fusobacterium sp. 7_1]
Length = 424
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 196/456 (42%), Gaps = 114/456 (25%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKN-- 58
++L+L R + E +++ K+R NV++ D +E D K R+ + +N + +N
Sbjct: 3 IMLELKFMRE----NVEMLKEMLKNRNSNVDM-DAFVELDSKRREVLSEVENLKRERNNV 57
Query: 59 ----------------LCSKVIGEKMKAKE----------PVGDSSTLPGNHLHPSVPVS 92
L K+ G K KE + D N HPS P+
Sbjct: 58 SVEIANLKKEKKDASHLIEKMGGVSAKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIG 117
Query: 93 NNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+E+ N +R G+ KK+S H D+ + +D E GA ++G R +G A
Sbjct: 118 PDENYNLEIRKWGEP---KKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAAR 174
Query: 148 LQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + L +E+GYT TPF ++ EV + QL +F+E++YK
Sbjct: 175 LERALINFMLDVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTT---------- 224
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
DD YLI+TSE + +HR L ++ LP Y S CFR+E
Sbjct: 225 ------DDMYLISTSEITMTNIHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIR 278
Query: 254 --------------------DLTK------------SIAYRVVNIVSGALNHAAAKKLDL 281
+L K + YRV+ + SG L +AAK DL
Sbjct: 279 VHQFNKVEMVKITDAESSYDELEKMVKNAETILQRLELPYRVIQLCSGDLGFSAAKTYDL 338
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W P +RE+ SCSNC +Q+RR+ ++Y ++ EF H LN + A R + A
Sbjct: 339 EVWLPSQNKYREISSCSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVA 394
Query: 342 ILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
I+E +Q E G + VP V + G + +K
Sbjct: 395 IMENYQQEDGSFL-------VPKVLIPYMGGVDVIK 423
>gi|39995148|ref|NP_951099.1| seryl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|409910622|ref|YP_006889087.1| seryl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|67461826|sp|Q74H55.1|SYS_GEOSL RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|39981910|gb|AAR33372.1| seryl-tRNA synthetase [Geobacter sulfurreducens PCA]
gi|298504178|gb|ADI82901.1| seryl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 422
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 154/333 (46%), Gaps = 67/333 (20%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGG 136
T+P N HP+VPV +E +N VRT G+ H ++ + +D E GA + G
Sbjct: 101 TVP-NVPHPTVPVGASEADNRQVRTWGEPPCFAFDPKPHWEIGEGLGILDFERGAKLTGA 159
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV 195
R +G L+ LV + L E+ Y + PF + +E M QL +F+++L+ +
Sbjct: 160 RFTLYRGAGARLERALVNFMLDLHTERHNYLEMLPPFVVNRESMTGTGQLPKFEDDLFHL 219
Query: 196 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-- 253
G D +LI T+E P+ +HR L A LP+ Y + CFR+E
Sbjct: 220 EGV---------------DYFLIPTAEVPVTNIHRAEILKAADLPLSYTAYTPCFRKEAG 264
Query: 254 ------------------DLTK-------------------------SIAYRVVNIVSGA 270
+L K +AYRVV + +G
Sbjct: 265 SYGKDVRGLIRQHQFNKVELVKFVHPATSYDELEKLLSNAEEVLRQLGLAYRVVELCTGD 324
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
+ +AAK D+E W PG +RE+ SCSN D+QSRR +R+ + +K K EFVH LN
Sbjct: 325 MGFSAAKTYDIEVWLPGQETYREISSCSNFEDFQSRRASIRFREDEK--SKPEFVHTLNG 382
Query: 331 TACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+ A R + AILE +Q E G V IPD LR ++
Sbjct: 383 SGLAVGRTLVAILENYQQEDGSVVIPDVLRPYM 415
>gi|395205979|ref|ZP_10396610.1| serine--tRNA ligase [Propionibacterium humerusii P08]
gi|422440877|ref|ZP_16517690.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA3]
gi|422472003|ref|ZP_16548491.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA2]
gi|422572767|ref|ZP_16648334.1| seryl-tRNA synthetase [Propionibacterium acnes HL044PA1]
gi|313836482|gb|EFS74196.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA2]
gi|314928937|gb|EFS92768.1| seryl-tRNA synthetase [Propionibacterium acnes HL044PA1]
gi|314971072|gb|EFT15170.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA3]
gi|328906615|gb|EGG26390.1| serine--tRNA ligase [Propionibacterium humerusii P08]
Length = 424
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 189/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
++D L RT DP+ VR++Q R ++ +VD V+ D R+
Sbjct: 1 MIDPKLLRT----DPDTVRRSQVARGEDPSIVDNVVAADEARREAIAAHENLRAEQKGLG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ + K + +V K A E + L GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLTRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E K H+++ + +D E G ++G R Y L G L++
Sbjct: 116 DEGAIKETIGTPRDFAAEGFKPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEL 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + A H + L +A LP RY+ S C+R+E
Sbjct: 223 --DDQYLVGTSEVALAAFHSEEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 254 --------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D + I ++V+++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPEEAEAWHEKLLSFEKDFITALEIPFQVLDVASGDLGLSAARKYDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +R+ + + +E + LN T CA TR+I +LE
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VR+P LR ++
Sbjct: 397 HQQADGSVRVPKALRPYL 414
>gi|296131564|ref|YP_003638811.1| seryl-tRNA synthetase [Thermincola potens JR]
gi|296030142|gb|ADG80910.1| seryl-tRNA synthetase [Thermincola potens JR]
Length = 423
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 178/378 (47%), Gaps = 71/378 (18%)
Query: 44 RQFRHKADNFNKFKNLCSKV--IGEKMKAKEP--VGDSSTLPGNHLHPSVPVSNNEDENG 99
+Q +H + + + + K+ + EK+K E G T+P N H SVPV ++ +N
Sbjct: 63 KQGQHPEEMILEMRQVSQKIKELDEKVKEVEENLAGALLTIP-NIPHESVPVGASDADNQ 121
Query: 100 IVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYAL 157
+R G+ + +H D+ +D +D E A +AG R F KG L+ ++ + L
Sbjct: 122 EIRRWGEPRQFAFEPKAHWDIGENLDILDFERAAKIAGARFTFYKGLGARLERAVINFML 181
Query: 158 SKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKY 216
E GYT ++ PF + ++ M QL +F+E+++++ DS D +
Sbjct: 182 DLHTREHGYTEIFPPFLVNRDSMIGTGQLPKFEEDMFRI--------DSV-------DYF 226
Query: 217 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------------DLT 256
LI T+E P+ ++R L A LP+ ++ S CFR E +L
Sbjct: 227 LIPTAEVPVTNIYRGEILDGAQLPLYHVAYSACFRAEAGAHGRDTRGLIRQHQFNKVELV 286
Query: 257 K-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAF 291
K + YRVV + +G L ++AK D+E W P A+
Sbjct: 287 KFTKPEDSFEELEKLTANAEKVLQLLGLPYRVVTLCTGDLGFSSAKTYDIEVWLPSYQAY 346
Query: 292 RELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG 351
+E+ SCSN LD+Q+RR +R+ ++ K EFVH LN + A R + AILE +Q E G
Sbjct: 347 KEISSCSNFLDFQARRANIRF--RREAGSKPEFVHTLNGSGLAVGRTVAAILENYQQEDG 404
Query: 352 -VRIPDCLRKFVPAVYVN 368
V +P+ LR ++ +N
Sbjct: 405 SVVVPEVLRPYMGVDKIN 422
>gi|184201584|ref|YP_001855791.1| seryl-tRNA synthetase [Kocuria rhizophila DC2201]
gi|238689205|sp|B2GGG9.1|SYS_KOCRD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|183581814|dbj|BAG30285.1| seryl-tRNA synthetase [Kocuria rhizophila DC2201]
Length = 434
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 189/435 (43%), Gaps = 107/435 (24%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQ----FRHKADNFNKFKNLCSKVIGEK--- 67
DP+ R +Q R + LVD+++E D + R F N F ++ GE+
Sbjct: 10 DPDTYRASQTARGADAGLVDRILEADSRRRSAITDFESLRAEQNAFGKKVARAQGEEKQQ 69
Query: 68 --MKAKEPVGDS------------------STLPGNHLHPSVPVSNNEDENGIVRTKGD- 106
+ K+ D + P N + +P + ED+ +RT+G
Sbjct: 70 LLAQVKQLAADVKAAQAAADEAQATQQQLVTQFP-NLIVEGIP-AGGEDDFVQLRTEGTP 127
Query: 107 ----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIE 162
E + H++L ++DG+D E GA V+G R YFLK L+ L+ A ++
Sbjct: 128 RDFAAEGFEPRDHLELGELLDGIDMERGAKVSGSRFYFLKRDVARLETALLMAAQDLALD 187
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSE 222
G+ P+ TP +R +M + D+E+Y+V GK DD YL+ TSE
Sbjct: 188 NGFIPMTTPNLVRPGIMNGTGFDVEHDDEIYRV-GK--------------DDLYLVGTSE 232
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK------------------------- 257
+ H D L + P+RY G S+C+R+E +
Sbjct: 233 VALAGYHSDEILDLSGGPLRYAGWSSCYRREAGSAGKDTRGIIRVHQFNKLEMFVYCHPE 292
Query: 258 --------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
+AYRV++ +G L +AA+K D EAW P G +REL S
Sbjct: 293 DAAAEHERLLAWEEQMLQACGLAYRVIDTAAGDLGTSAARKFDCEAWIPTQGKYRELTST 352
Query: 298 SNCLDYQSRRLLVR---------YGQTKKMNEKIEFVHMLNATACATTRVICAILETHQT 348
SNC YQ+RRL +R +G+ KK + V LN T ATTR + A+LETHQ
Sbjct: 353 SNCTTYQARRLNIRERLPETTDAHGKVKKGGTRA--VATLNGT-LATTRWLVALLETHQQ 409
Query: 349 ETG-VRIPDCLRKFV 362
G V +P+ LR ++
Sbjct: 410 ADGSVTVPELLRPYL 424
>gi|433636932|ref|YP_007270559.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070017]
gi|432168525|emb|CCK66065.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070017]
Length = 419
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 185/434 (42%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR++Q R ++ LVD ++ D R AD+ + S
Sbjct: 1 MIDLKLLRE----NPDAVRRSQLSRGEDPALVDALLTADAARRAAISTADSLRAEQKAAS 56
Query: 62 KVIGEKMKAKEPV--------------------GDSSTLPGNHLHPS------VPVSNNE 95
K +G + P + HL S VP + E
Sbjct: 57 KSVGGASPEERPALLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVP-AGGE 115
Query: 96 DENGIVRTKGD-TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ G+ + + H++L + +D + GA V+G R YFL G LQ+GL+Q
Sbjct: 116 DDYAVLDVVGEPSYLENPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
AL ++ G+ P P +R EVM L EE+Y+V G G
Sbjct: 176 LALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDG--------------- 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H L + P+RY G S+CFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ +G L +AA+K D EAW P G
Sbjct: 281 GFVYCTPADAEHEHEGLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQG 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
A+REL S SNC +Q+RRL RY + + K + LN T TTR + AILE HQ
Sbjct: 341 AYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGT-LGTTRWLVAILENHQRP 396
Query: 350 TG-VRIPDCLRKFV 362
G VR+PD L FV
Sbjct: 397 DGSVRVPDALVPFV 410
>gi|423137693|ref|ZP_17125336.1| seryl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
F0419]
gi|371959382|gb|EHO77071.1| seryl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 421
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 191/441 (43%), Gaps = 112/441 (25%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAK----- 71
E +++ K+R NV++ D +E D K R+ + +N + +N S I K K
Sbjct: 12 EMLKEMLKNRNSNVDM-DAFVELDSKRREVLSEVENLKRERNNVSAEIANLKKEKKDATH 70
Query: 72 --EPVGDSST----------------------LPGNHLHPSVPVSNNEDENGIVRTKGDT 107
E +G ST +P N HPS P+ +E+ N +R G+
Sbjct: 71 LIEKMGGVSTKIKELDNELVEIDEKIKDIQLNIP-NVYHPSTPIGPDENYNLEIRKWGEP 129
Query: 108 EVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS-KWI 161
KK+S H D+ + +D E GA ++G R +G A L+ L+ + L +
Sbjct: 130 ---KKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALINFMLDVHTL 186
Query: 162 EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
E+GYT TPF ++ EV + QL +F+E++YK DD YLI+TS
Sbjct: 187 EEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTT----------------DDMYLISTS 230
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------------- 253
E + +HR L ++ LP Y S CFR+E
Sbjct: 231 EITMTNIHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDA 290
Query: 254 -----DLTK------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVS 296
+L K + YRV+ + SG L +AAK DLE W P +RE+ S
Sbjct: 291 ESSYDELEKMVKNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISS 350
Query: 297 CSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPD 356
CSNC +Q+RR+ ++Y ++ EF H LN + A R + AI+E +Q + G +
Sbjct: 351 CSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVAIMENYQQKDGSFL-- 404
Query: 357 CLRKFVPAVYVNEAGEIPFVK 377
VP V + G + +K
Sbjct: 405 -----VPKVLIPYMGGVDVIK 420
>gi|422431716|ref|ZP_16508587.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA2]
gi|422509569|ref|ZP_16585725.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA1]
gi|313817098|gb|EFS54812.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA1]
gi|315100032|gb|EFT72008.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA2]
Length = 424
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 190/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
++D L RT DP+ VR++Q R ++ +VD V+ D R+
Sbjct: 1 MIDPKLLRT----DPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ ++ K + +V K A E + L GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E + H+++ + +D E G ++G R Y L G L+
Sbjct: 116 DEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 --DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 254 --------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D + I ++++++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQIPFQMLDVASGDLGLSAARKFDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +R+ + + +E + LN T CA TR+I +LE
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VRIP+ LR ++
Sbjct: 397 HQQADGSVRIPEALRPYL 414
>gi|365839087|ref|ZP_09380336.1| serine--tRNA ligase [Anaeroglobus geminatus F0357]
gi|364565655|gb|EHM43372.1| serine--tRNA ligase [Anaeroglobus geminatus F0357]
Length = 425
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 189/423 (44%), Gaps = 95/423 (22%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIG----------E 66
E V+ N K+R V+ VD I+ D + R+ + + +N +K I E
Sbjct: 12 EAVKTNLKNRNARVD-VDAFIKLDARRRELLGRVEAMKSRRNEVTKEISVLKRSKENADE 70
Query: 67 KMKAKEPVGDS-STLPG-----------------NHLHPSVPVSNNEDENGIVRTKGDTE 108
K+ A + +GD + L G N HPSVPV ++ +N VR G+T
Sbjct: 71 KIAAMKALGDEIAALDGRVKETEDKMLEIRLMLPNMCHPSVPVGKDDSDNPEVRKWGETP 130
Query: 109 VRK--KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GY 165
+H ++ + +D+E VAG R YF G L+ + + L + E GY
Sbjct: 131 AFSFIPKNHWEIGEHLGILDAERAGKVAGSRFYFYLGAGARLERAVYNFMLDRHTETDGY 190
Query: 166 TPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPI 225
T + P+ + ++ M QL +F ++++++ G+ + ++I T+E P+
Sbjct: 191 TEVIPPYIVNRDSMIGTGQLPKFYDDMFRIEGQ---------------EMFMIPTAEVPL 235
Query: 226 CAVHRDSWLPEASLPIRYLGVSTCFRQE--------------------DLTKSIA----- 260
+R + A LP+ + V+ CFR E ++ K +A
Sbjct: 236 TNYYRGEIIDGAELPVYFTSVTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKYVAPETSY 295
Query: 261 --------------------YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNC 300
YRVV + +G + +AAK D+E WFP G +RE+ SCSN
Sbjct: 296 DELDKLTENAEMILRELGLPYRVVCLCTGDIGFSAAKTFDIEVWFPAQGKYREISSCSNT 355
Query: 301 LDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLR 359
D+Q+RR +R+ + K K E+VH LN + A R + A+LE +Q E G V IP+ LR
Sbjct: 356 EDFQARRANIRFRRDAK--SKPEYVHTLNGSGLAVGRTVAAVLENYQQEDGSVIIPEVLR 413
Query: 360 KFV 362
++
Sbjct: 414 PYM 416
>gi|433632927|ref|YP_007266555.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070010]
gi|432164520|emb|CCK61978.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070010]
Length = 419
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 186/434 (42%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR++Q R ++ LVD ++ D R AD+ + S
Sbjct: 1 MIDLKLLRE----NPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKTAS 56
Query: 62 KVIGEKMKAKEP--------------------VGDSSTLPGNHLHPS------VPVSNNE 95
K +G + P V + HL S VP + E
Sbjct: 57 KSVGGASPEERPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVP-AGGE 115
Query: 96 DENGIVRTKGD-TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ G+ + + H++L + +D + GA V+G R YFL G LQ+GL+Q
Sbjct: 116 DDYAVLDVVGEPSYLENPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
AL ++ G+ P P +R EVM L EE+Y+V G G
Sbjct: 176 LALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDG--------------- 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H L + P+RY G S+CFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ +G L +AA+K D EAW P G
Sbjct: 281 GFVYCTPADAEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQG 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
A+REL S SNC +Q+RRL RY + + K + LN T TTR + AILE HQ
Sbjct: 341 AYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGT-LGTTRWLVAILENHQRP 396
Query: 350 TG-VRIPDCLRKFV 362
G VR+PD L FV
Sbjct: 397 DGSVRVPDALVPFV 410
>gi|291288281|ref|YP_003505097.1| seryl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290885441|gb|ADD69141.1| seryl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 422
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 164/358 (45%), Gaps = 71/358 (19%)
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----H 115
S + E +A+E + D N + VPV +E++N + R+ G+ KKYS H
Sbjct: 83 SAIDAELTEAQEQMTDMLLTIPNLIKDEVPVGADENDNVLFRSWGEP---KKYSFEAKPH 139
Query: 116 VDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMR 175
D+ + VD E G +A R G L+ L+ + L E+GY + P+ +
Sbjct: 140 WDIAEGLGLVDFERGVKIAQSRFSAYMGLGAKLERALINFMLDAHAERGYKEVLAPYLVN 199
Query: 176 KEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLP 235
E M+ QL +F+E+ +K EKD L YLI T+E + ++ L
Sbjct: 200 AEAMKGTGQLPKFEEDAFKC------------EKDGL---YLIPTAEVSVTNLYSQEILD 244
Query: 236 EASLPIRYLGVSTCFRQE--------------------DLTK------------------ 257
E LP+++ S CFR+E +L K
Sbjct: 245 EEMLPVKHCSYSACFRREAGSHGKDVRGLIRQHQFNKVELVKVVKPEDSDTELMELLESA 304
Query: 258 -------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLV 310
+I YR++ + SG L ++AK D+E W P G +RE+ SCS +D+Q+RR +
Sbjct: 305 EMILQKLNIPYRIMTLCSGDLGFSSAKTFDIEVWLPSQGGYREISSCSTFMDFQARRASI 364
Query: 311 RYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
R+ +K ++K+EF H LN + A R AILE +Q E G V +P+ LR ++ + V
Sbjct: 365 RF--RRKGDKKVEFAHTLNGSGLAVGRTFLAILENYQNEDGTVTVPEALRPYLNGLEV 420
>gi|422494802|ref|ZP_16571097.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA1]
gi|313813962|gb|EFS51676.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA1]
Length = 424
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 190/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
++D L RT DP+ VR++Q R ++ +VD V+ D R+
Sbjct: 1 MIDPKLLRT----DPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ ++ K + +V K A E + L GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E + H+++ + +D E G ++G R Y L G L+
Sbjct: 116 DEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 --DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 254 --------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D + I ++V+++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +R+ + + +E + LN T CA TR+I +LE
Sbjct: 341 PTQDRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VRIP+ LR ++
Sbjct: 397 HQQADGSVRIPEALRPYL 414
>gi|423416589|ref|ZP_17393678.1| seryl-tRNA synthetase [Bacillus cereus BAG3X2-1]
gi|401110137|gb|EJQ18050.1| seryl-tRNA synthetase [Bacillus cereus BAG3X2-1]
Length = 424
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 151/329 (45%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H S PV ED+N + R G+ K+++ H DL T + +D E V G R F
Sbjct: 109 HESAPVGETEDDNVVARNWGEV---KEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E +D +LI T+E P+ +HRD L + LPI+Y S+CFR E
Sbjct: 222 -----------ESEDYFLIPTAEVPVTNMHRDEILSKEQLPIQYAAFSSCFRSEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRV+++ +G L
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++ N K E VH LN + A
Sbjct: 331 AAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREPNGKPEHVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G + IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTIIIPEVLRPYM 417
>gi|377570232|ref|ZP_09799377.1| seryl-tRNA synthetase [Gordonia terrae NBRC 100016]
gi|377532506|dbj|GAB44542.1| seryl-tRNA synthetase [Gordonia terrae NBRC 100016]
Length = 419
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 179/420 (42%), Gaps = 90/420 (21%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKM------ 68
+P+ VR +Q+ R ++ LVD ++ D + R +AD + K +G+
Sbjct: 10 NPDLVRTSQRTRGEDPGLVDALLAADAERRAAIVEADALRSEQKTLGKQVGKAQGEEKQA 69
Query: 69 ----------KAKEPVGDSSTLPGNHLHPSVPVSN---------NEDENGIVRTKGDT-E 108
+ K V S +SN ED+ ++ G+ +
Sbjct: 70 LLAKGKELAEQVKAAVARQSEADAAAAKAHRAISNIVADGAPAGGEDDYVVLEHVGEPRD 129
Query: 109 VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPL 168
+ H++L + +D E GA V+G R YFL G LQ+ L+ A K G+T +
Sbjct: 130 IENPKDHLELGESLGLLDMERGAKVSGSRFYFLTGQGAQLQLALLNMAAQKATANGFTLM 189
Query: 169 YTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAV 228
P +R EVM+ L +E+Y + D+ DD YL+ TSE P+
Sbjct: 190 IPPVLVRPEVMEGTGFLGAHADEVYHL--------------DKDDDLYLVGTSEVPLAGY 235
Query: 229 HRDSWLPEASLPIRYLGVSTCFRQE----------------------------------- 253
H D L + P RY G STCFR+E
Sbjct: 236 HMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEDAEAEH 295
Query: 254 --------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDY 303
D+ +I YRV+++ G L +A++K D EAW P G +REL S SNC +
Sbjct: 296 QRLLGWEKDMLAAIDVPYRVIDVAGGDLGSSASRKYDCEAWVPTQGTYRELTSTSNCTTF 355
Query: 304 QSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
Q+RRL +RY + N + + LN T ATTR + AILE HQ G VR+P L KFV
Sbjct: 356 QARRLSIRY---RDENGRPQTAATLNGT-LATTRWLVAILENHQQPDGSVRLPAELAKFV 411
>gi|422457612|ref|ZP_16534270.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA2]
gi|315105281|gb|EFT77257.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA2]
Length = 424
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 190/438 (43%), Gaps = 101/438 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
++D L RT DP+ VR++Q R ++ +VD V+ D R+
Sbjct: 1 MIDPKLLRT----DPDAVRRSQIARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA+ ++ K + +V K A E + L GN + VP + E
Sbjct: 57 KRIAKASGDEKAELLSRTKTISGEVADLKKAADEADTKFTELAKTLGNIVIDGVP-AGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
DE I T G E + H+++ + +D E G ++G R Y L G L+
Sbjct: 116 DEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEF 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ A+SK + G+TP+ P ++ M+ L Q +++Y + P+
Sbjct: 176 ALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYL-----------PK-- 222
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 --DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWF 280
Query: 254 --------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWF 285
D + I ++V+++ SG L +AA+K D W
Sbjct: 281 DKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ S SNC +Q+RRL +R+ + + +E + LN T CA TR+I +LE
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTLCAMTRIIIMLLEN 396
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ G VRIP+ LR ++
Sbjct: 397 HQQADGSVRIPEALRPYL 414
>gi|73748415|ref|YP_307654.1| seryl-tRNA synthetase [Dehalococcoides sp. CBDB1]
gi|147669195|ref|YP_001214013.1| seryl-tRNA synthetase [Dehalococcoides sp. BAV1]
gi|289432463|ref|YP_003462336.1| seryl-tRNA synthetase [Dehalococcoides sp. GT]
gi|452203420|ref|YP_007483553.1| serine--tRNA ligase [Dehalococcoides mccartyi DCMB5]
gi|452204856|ref|YP_007484985.1| serine--tRNA ligase [Dehalococcoides mccartyi BTF08]
gi|123619533|sp|Q3ZWY0.1|SYS_DEHSC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|189083567|sp|A5FRN4.1|SYS_DEHSB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|73660131|emb|CAI82738.1| seryl-tRNA synthetase [Dehalococcoides sp. CBDB1]
gi|146270143|gb|ABQ17135.1| seryl-tRNA synthetase [Dehalococcoides sp. BAV1]
gi|288946183|gb|ADC73880.1| seryl-tRNA synthetase [Dehalococcoides sp. GT]
gi|452110479|gb|AGG06211.1| serine--tRNA ligase [Dehalococcoides mccartyi DCMB5]
gi|452111912|gb|AGG07643.1| serine--tRNA ligase [Dehalococcoides mccartyi BTF08]
Length = 413
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 187/432 (43%), Gaps = 96/432 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL R +PE VRK DR + +D+++E D R + DN + + +
Sbjct: 1 MLDLKFIRE----NPELVRKAVADRNTDAP-IDEILELDNSRRNLTQELDNLRAKRKIMA 55
Query: 62 K-------------------VIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVR 102
K + E + E + D N PSVPV +E EN ++
Sbjct: 56 KQRDETAIEEGRVLRGQISTLESELSQVDEKLTDRLLRVPNIPDPSVPVGKDESENVVLY 115
Query: 103 TKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYAL 157
+G+ ++ +S H +L +D +D + G ++G R Y LKG LQ L+ + L
Sbjct: 116 YRGE---KRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGAGARLQRALIAFML 172
Query: 158 SKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKY 216
K YT +Y P+ +++E + L +F + LY D +D +
Sbjct: 173 DLHTRKHDYTEIYPPYMIKRECLVASGNLPKFADNLYH---------------DAEEDYW 217
Query: 217 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS------------------ 258
+ T+E P+ +HRD L LPI Y+ + CFR+E ++
Sbjct: 218 WVPTAEAPLTNLHRDEILSAEQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELY 277
Query: 259 ---------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAF 291
I YR+ +V+ ++ +AK D+E + PG +
Sbjct: 278 KYCKPEDSFAELEKMVADAEEIADALKIPYRLKQLVTADISFGSAKSYDIEMYSPGVDEW 337
Query: 292 RELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG 351
E+ SCSNC D+Q RR VR+ +T + K EFVH LN + A RV+ +++E +Q G
Sbjct: 338 LEVSSCSNCTDFQGRRANVRFRRTSEA--KPEFVHTLNGSGLALPRVMISVIENYQQPDG 395
Query: 352 -VRIPDCLRKFV 362
+ IP+ LR F+
Sbjct: 396 SIVIPEVLRPFM 407
>gi|390933698|ref|YP_006391203.1| seryl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569199|gb|AFK85604.1| Seryl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 423
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 157/336 (46%), Gaps = 73/336 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIV 133
T+P N H SVPV +++ +N +R G D EV+ H D+ + +D EA + V
Sbjct: 102 TIP-NIPHESVPVGDSDADNVEIRRWGEVREFDFEVK---PHWDIGVELGLLDFEAASRV 157
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
G R F KG L+ L+ + + EK GYT ++ PF + + M QL +F+E+
Sbjct: 158 TGSRFTFYKGLGCRLERALINFMMDLHTEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDA 217
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
+KV G D +LI T+E P+ ++R++ + LPI S CFRQ
Sbjct: 218 FKVAGT---------------DYFLIPTAEVPVTNMYRETIIDGEKLPIYNCAYSACFRQ 262
Query: 253 E-------------------------------------------DLTKS--IAYRVVNIV 267
E D+ K+ I YRVV+I
Sbjct: 263 EAGSAGRDTRGLIRQHQFNKVELVKITEPEKSYEELEKMVSDAEDVLKTLGIPYRVVSIC 322
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G L AAKK DLE W P G + E+ SCSNC D+Q+RR ++Y K K ++VH
Sbjct: 323 TGDLGFTAAKKYDLEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHT 380
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R AILE +Q + G V +P+ LR ++
Sbjct: 381 LNGSGVAVGRTFAAILENYQQKDGSVVVPEALRPYM 416
>gi|224531827|ref|ZP_03672459.1| seryl-tRNA synthetase [Borrelia valaisiana VS116]
gi|224511292|gb|EEF81698.1| seryl-tRNA synthetase [Borrelia valaisiana VS116]
Length = 425
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 162/337 (48%), Gaps = 71/337 (21%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKG---DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGY 139
N L P VP+ N E+++ ++ G + + + K H++L +D +D + V+G + Y
Sbjct: 104 NILSPDVPIGNIEEDHFEIKKVGVIPNFDFKPK-DHLELGRDLDLLDFDRAREVSGNKFY 162
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
+LK AV L++ L+ ++L+K EKG+ TP R+ +++ IG
Sbjct: 163 YLKNEAVFLEIALINFSLNKLREKGFDVFITPDVAREFIVEG--------------IGFN 208
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----D 254
+ +S K E DKYL+ TSE + + + + + +LPI+ G S CFR+E
Sbjct: 209 PRGNESNIYKIEGTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAGTYGQ 267
Query: 255 LTKS----------------------------------------IAYRVVNIVSGALNHA 274
L+K I YRV+NI S L
Sbjct: 268 LSKGLYRVHQFSKVEMFCFCKAEESQVIHDEFLGIQEQIFTELEIPYRVLNICSFDLGSP 327
Query: 275 AAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
A KK D+EAW PG G++ E+ S SNC DYQSRRL +RY N +F HM+N T
Sbjct: 328 AYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNGT 384
Query: 332 ACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
A ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 385 AIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDYI 421
>gi|254366378|ref|ZP_04982422.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis str.
Haarlem]
gi|134151890|gb|EBA43935.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis str.
Haarlem]
Length = 419
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 185/434 (42%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R P VR++Q R ++ LVD ++ D R AD+ + S
Sbjct: 1 MIDLKLLRET----PNAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAAS 56
Query: 62 KVIGEKMKAKEP--------------------VGDSSTLPGNHLHPS------VPVSNNE 95
K +G + P V + HL S VP + E
Sbjct: 57 KSVGGASPEERPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVP-AGGE 115
Query: 96 DENGIVRTKGD-TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ G+ + + H++L + +D + GA V+G R YFL G LQ+GL+Q
Sbjct: 116 DDYAVLDVVGEPSYLENPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
AL ++ G+ P P +R EVM L EE+Y+V G G
Sbjct: 176 LALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDG--------------- 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H L + P+RY G S+CFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ +G L +AA+K D EAW P G
Sbjct: 281 GFVYCTPADAEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQG 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
A+REL S SNC +Q+RRL RY + + K + LN T ATTR + AILE HQ
Sbjct: 341 AYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGT-LATTRWLVAILENHQRP 396
Query: 350 TG-VRIPDCLRKFV 362
G VR+PD L FV
Sbjct: 397 DGSVRVPDALVPFV 410
>gi|343127544|ref|YP_004777475.1| seryl-tRNA synthetase [Borrelia bissettii DN127]
gi|342222232|gb|AEL18410.1| seryl-tRNA synthetase [Borrelia bissettii DN127]
Length = 425
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 165/339 (48%), Gaps = 75/339 (22%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N L P VP+ ++E++N ++ G V K+ H++L +D +D + ++G +
Sbjct: 104 NILSPDVPIGSSEEDNFEIKKVG---VVPKFDFKPKDHLELGRDLDLLDFDRAREISGSK 160
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
Y+LK AV L++ L+ ++L+K EKG+ TP +VA+ E + IG
Sbjct: 161 FYYLKNEAVFLEIALINFSLNKLREKGFDVFITP---------DVAR-----EFIVDGIG 206
Query: 198 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---- 253
+ +S K E DKYL+ TSE + + + + + +LPIR G S CFR+E
Sbjct: 207 FNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAGAY 265
Query: 254 -DLTKS----------------------------------------IAYRVVNIVSGALN 272
L+K I YRV+NI S L
Sbjct: 266 GQLSKGLYRVHQFSKVEMFCFCKAEESGVIHDEFLSIQEQIFTELEIPYRVLNICSFDLG 325
Query: 273 HAAAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLN 329
A KK D+EAW PG G++ E+ S SNC DYQSRRL +RY K + + +F HM+N
Sbjct: 326 SPAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRY---KDQDGQSKFAHMVN 382
Query: 330 ATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
TA ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 383 GTAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|146296476|ref|YP_001180247.1| seryl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|166201242|sp|A4XJH1.1|SYS_CALS8 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|145410052|gb|ABP67056.1| seryl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 420
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 194/442 (43%), Gaps = 109/442 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL R+ +PEKV++ R K++ + ++E D K R+ + + +N S
Sbjct: 1 MLDLKFIRS----NPEKVQEGLNKRNKDISIA-PILELDEKRRKLLAEVEKMKAIQNQKS 55
Query: 62 KVI----------GEKMKAKEPVGDSS-------------------TLPGNHLHPSVPVS 92
K I E M + + D T+P N H SVP+
Sbjct: 56 KEIPKLKKEGKDTTELMNELKELSDKIKELDSQVKEVEDEIEKILLTIP-NIPHESVPIG 114
Query: 93 NNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
++ EN VR G D E++ H ++ + +D E + V+G R F +G
Sbjct: 115 KDDTENVEVRRWGEPRVPDFEIK---PHWEIGEKLGILDFERASKVSGSRFTFYRGLGAR 171
Query: 148 LQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + L IEK GY L+ PF + ++ M QL +F+E+ +K
Sbjct: 172 LERALINFMLDLHIEKHGYVELFPPFLVARKSMIGTGQLPKFEEDAFKTT---------- 221
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR--------------- 251
DD +LI T+E P+ HR+ L E LPI+Y+ S CFR
Sbjct: 222 ------DDYFLIPTAEVPVTNYHREEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIR 275
Query: 252 ----------------------------QEDLTKSIA--YRVVNIVSGALNHAAAKKLDL 281
ED+ K + YRVV + SG L ++AK D+
Sbjct: 276 QHQFNKVELVKFAKPEDSYDELEKLTADAEDVLKHLGLPYRVVLLCSGDLGFSSAKTYDI 335
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W P G + E+ SCSN +Q+RR +R+ ++ + K++FVH LN + A R + A
Sbjct: 336 EVWMPSYGRYVEISSCSNFESFQARRANIRF---RRKDGKLDFVHTLNGSGLAVGRTVAA 392
Query: 342 ILETHQTETG-VRIPDCLRKFV 362
ILE Q + G V +P+ LRK++
Sbjct: 393 ILENFQQKDGSVVVPEVLRKYM 414
>gi|345016475|ref|YP_004818828.1| seryl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344031818|gb|AEM77544.1| Seryl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 423
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 157/336 (46%), Gaps = 73/336 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIV 133
T+P N H SVP+ +++++N +R G+ +K+ H ++ + +D EA A V
Sbjct: 102 TIP-NIPHESVPIGDSDEDNVEIRRWGEP---RKFDFEPKPHWEIGEELGILDFEAAARV 157
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
G R F KG L+ L+ + L IE+ GYT ++ PF + M QL +F+E+
Sbjct: 158 TGSRFTFYKGLGARLERALINFMLDLHIERHGYTEVFPPFMAHRRSMFGTGQLPKFEEDA 217
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
+KV G D +LI T+E P+ ++RD+ + LPI + S CFRQ
Sbjct: 218 FKVYGT---------------DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQ 262
Query: 253 E--------------------DLTK-------------------------SIAYRVVNIV 267
E +L K + YRVV I
Sbjct: 263 EAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVAIC 322
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G L A+KK D+E W P G + E+ SCSNC D+Q+RR ++Y K K ++VH
Sbjct: 323 TGDLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHT 380
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R AILE +Q E G V IP+ LR ++
Sbjct: 381 LNGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|222480484|ref|YP_002566721.1| seryl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
gi|254783030|sp|B9LQZ7.1|SYS_HALLT RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|222453386|gb|ACM57651.1| seryl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
Length = 456
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 191/445 (42%), Gaps = 99/445 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGE-------- 66
+PE VR+ ++ +V+L D++++ D +WR+ + + D+ +N S IGE
Sbjct: 10 NPEVVREALDNKGVDVDL-DRILDVDEEWRELKSRGDDLRHERNEVSSTIGELKQAGEEE 68
Query: 67 --------------KMKAKEPVGDSSTLPGNHL--------HPSVPVSNNEDENGIVRTK 104
+++ E D H SVPV +E EN R +
Sbjct: 69 AAQEAIERSQEVKSELQEIEERADELEAELEESLLELPQIPHESVPVGADESENVERRRE 128
Query: 105 GDTEVRKK----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW 160
G ++R+ H DL ++ +D E GA VAGG Y KG L+ L+Q+ L
Sbjct: 129 GFDDLREVPDNVEPHYDLGEELEILDFERGAKVAGGGFYVAKGDGARLEHALIQFMLDVH 188
Query: 161 IEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIAT 220
E+ Y ++ P + M+ QL +F E+ Y++ G E D DD +L+ T
Sbjct: 189 REQDYRDVFPPIAVNSTSMRGTGQLPKFTEDAYRIEGTNEDAYDD-------DDLWLLPT 241
Query: 221 SEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----DLTKSIA--------------- 260
+E P+ +HRD L LP++Y + FRQE T+ I
Sbjct: 242 AEVPVTNLHRDEILLGEDLPLKYQAYTPNFRQEAGEHGTETRGIVRVHQFNKVEMVNFVR 301
Query: 261 -------------------------YRVVNIVSGALNHAAAKKLDLEAWFPG-------- 287
YR++ + +G L AKK DLE W P
Sbjct: 302 PEESHERFEGLVDEAEEVLRRLELPYRILEMCTGDLGFTQAKKYDLEVWAPADDMDEGPA 361
Query: 288 -SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G + E+ S SN ++Q+RR +RY ++ +E EF+H LN + A R++ AILE +
Sbjct: 362 EGGRWLEVSSVSNFEEFQARRAGIRY--REEHHESAEFLHTLNGSGLAVPRIVVAILEYY 419
Query: 347 QTETG-VRIPDCLRKFVPAVYVNEA 370
Q + G V +P+ LR ++ V E
Sbjct: 420 QNDDGTVTVPEALRPYMGGTEVIEG 444
>gi|403525199|ref|YP_006660086.1| seryl-tRNA synthetase SerS [Arthrobacter sp. Rue61a]
gi|403227626|gb|AFR27048.1| seryl-tRNA synthetase SerS [Arthrobacter sp. Rue61a]
Length = 426
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 190/432 (43%), Gaps = 98/432 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQ--FRHKA--DNFNKFKNLCSKVIGEKMKA 70
+P+K R +Q+ R + +VD +I D R RH+ N F ++ GE+ +A
Sbjct: 10 NPDKFRASQRARGADESVVDAIISADSDRRAALIRHETLRAEQNAFGKKVAQAKGEEKQA 69
Query: 71 -----KEPVGDSS------------------TLPGNHLHPSVPVSNNEDENGIVRTKGD- 106
KE +P N + VP ED+ +V+T G
Sbjct: 70 LLAEVKELANSVKAASAEAAAAQAKQEELLRVIP-NLVVDGVP-EGGEDDYVVVKTVGTP 127
Query: 107 ---TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
T+ K H+++ +I +D E GA V+G R YFL+G L++ L+Q A+ + I+
Sbjct: 128 REFTDFEPK-DHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALLQMAMEQAIDA 186
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
G+ P+ TP +R E MQ + D E+Y++ DD YL+ TSE
Sbjct: 187 GFVPMITPTLVRPETMQGTGFDVKHDAEIYRLAE---------------DDLYLVGTSEV 231
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFRQED----------------------------- 254
+ H D L ++ PIRY G S+C+R+E
Sbjct: 232 ALAGYHADEILDFSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEE 291
Query: 255 ---------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
L K + YRV++ +G L +AA+K D EAW P A+REL S S
Sbjct: 292 AAAEHERLLAWEEEMLAKCELPYRVIDTAAGDLGMSAARKFDCEAWVPTQNAYRELTSTS 351
Query: 299 NCLDYQSRRLLV--RYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIP 355
NC +Q+RRL + R + + + V LN T ATTR I AILE HQ G V +P
Sbjct: 352 NCTTFQARRLNIRERVINDEGVAKGTRAVATLNGT-LATTRWIVAILEHHQNPDGSVNVP 410
Query: 356 DCLRKFVPAVYV 367
L+K++ + V
Sbjct: 411 KALQKYLGGLEV 422
>gi|291280329|ref|YP_003497164.1| seryl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290755031|dbj|BAI81408.1| seryl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 425
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 152/336 (45%), Gaps = 71/336 (21%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N + SVP+ +E N + + G ++ +S H D+ +D VD E G +A R
Sbjct: 106 NLIDDSVPIGEDESANVLYKEWG---AKRDFSFNPKPHWDIAEKLDIVDFERGVKLAKSR 162
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
KG L+ L+ + L E GY + PF + ++ M QL +F+EEL+K
Sbjct: 163 FSLYKGTGAKLERALINFMLDVQSENGYQEIIPPFLVNEKTMTGTGQLPKFEEELFKC-- 220
Query: 198 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---- 253
E D+ YLI T+E P+ ++ D L E LP+ + CFR+E
Sbjct: 221 -------------ERDNLYLIPTAEVPVTNIYADEILSEDDLPLYMTAYTPCFRREAGSH 267
Query: 254 ----------------DLTK-------------------------SIAYRVVNIVSGALN 272
+L K I YRV+ + SG L
Sbjct: 268 GKDVRGLIRQHQFNKVELVKIVKPEDSDEELEKLLLDAEKILQLLEIPYRVMTLCSGDLG 327
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
+AAK D+E W PG G ++E+ SCSN D+QSRR +++ +K +K E+ H LN +
Sbjct: 328 FSAAKTYDIEVWLPGLGTYKEISSCSNFKDFQSRRANIKF--RRKDTKKTEYPHTLNGSG 385
Query: 333 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
A R AILE +Q E G V +P+ LRK++ + V
Sbjct: 386 LAVGRTFLAILENYQQEDGSVVVPEVLRKYMGGIEV 421
>gi|377820089|ref|YP_004976460.1| seryl-tRNA synthetase [Burkholderia sp. YI23]
gi|357934924|gb|AET88483.1| seryl-tRNA synthetase [Burkholderia sp. YI23]
Length = 432
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 156/336 (46%), Gaps = 69/336 (20%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIV 133
T+P N H SVPV N+E +N VR G D EVR HVD+ + GVD E GA +
Sbjct: 102 TVP-NLPHESVPVGNDETQNVEVRRWGTPRAFDFEVR---DHVDVGAPL-GVDFETGAKL 156
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
+G R L+G L L Q+ + E+ GYT YTP+ + E++ QL +F +++
Sbjct: 157 SGARFTLLRGQIARLHRALAQFMIDTHTEQHGYTEAYTPYIVNPEILYGTGQLPKFADDM 216
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
++V EK GD + +YLI+TSE + RDS L +LP++ S CFR
Sbjct: 217 FRV----EKGGD-----ENTVTQYLISTSEISLTNTVRDSILEADALPVKLTAHSPCFRS 267
Query: 253 ED--------------------------------------------LTK-SIAYRVVNIV 267
E L K + YRV+ +
Sbjct: 268 EAGSYGRDTRGLIRQHQFDKVEMVQVTSPEHSYAALDEMVGQAETILQKLELPYRVITLC 327
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G + +AAK DLE W P +RE+ SCSN +Q+RR+ R+ + K EFVH
Sbjct: 328 TGDMGFSAAKTFDLEVWLPAQNTYREISSCSNTEAFQARRMQARF---RNAQGKPEFVHT 384
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R + A+LE Q G V IP LR ++
Sbjct: 385 LNGSGLAVGRTLVAVLENFQNADGSVTIPAALRPYM 420
>gi|262037439|ref|ZP_06010902.1| serine--tRNA ligase [Leptotrichia goodfellowii F0264]
gi|261748529|gb|EEY35905.1| serine--tRNA ligase [Leptotrichia goodfellowii F0264]
Length = 423
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 73/341 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKY-----SHVDLITMIDGVDSEAGAIV 133
T+P N LH + PV +ED+N +R G+ KK+ SH +L ++ +D E G+ +
Sbjct: 102 TIP-NKLHETTPVGESEDDNVEIRKWGEP---KKFDFTPKSHDELGVNLEILDFERGSKL 157
Query: 134 AGGRGYFLKGPAVCLQVGLVQYAL-SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
AG R KG A L+ L+ + L + E G+ + TP ++E+M QL +F++++
Sbjct: 158 AGSRFTVYKGQAARLERALINFMLDTHTTEHGFEEIMTPQMAKREIMTGTGQLPKFEDDM 217
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
YK+ E +D +LI T+E + +H L E LP Y G + CFR+
Sbjct: 218 YKI---------------EEEDLFLIPTAEVTLTNLHNGEILSEEELPKYYCGFTACFRK 262
Query: 253 ---------------------------------EDLTKSIA------------YRVVNIV 267
E+L K ++ YRV+ +
Sbjct: 263 EAGSGGKDLKGIIRQHQFNKVEMVKIVHPESSYEELEKMVSNAERILQKLELPYRVIALC 322
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
SG + +A+K D+E W P +RE+ SCSN D+Q+RR +++Y K N K FVH
Sbjct: 323 SGDIGFSASKTYDIEVWVPSQDKYREISSCSNTEDFQARRAMIKY--RSKENGKSYFVHT 380
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
LN + A R + AI+E +Q E G +++P+ L ++ + V
Sbjct: 381 LNGSGLAVGRTLLAIMENYQQEDGSIKVPEALVPYMGGLTV 421
>gi|288818895|ref|YP_003433243.1| seryl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|384129645|ref|YP_005512258.1| seryl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|288788295|dbj|BAI70042.1| seryl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|308752482|gb|ADO45965.1| seryl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
Length = 424
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 157/333 (47%), Gaps = 72/333 (21%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N H SVPV +E +N VR G + K++ H ++ + +D E GA ++G R
Sbjct: 107 NLPHTSVPVGEDEKDNVEVRRWG---IPKEFGFEPKPHWEIGEKLGILDFERGAKLSGSR 163
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
LKG L+ L+ + L +KGY + P ++ +V++ QL +F+EELY+
Sbjct: 164 FTVLKGMGAKLERALINFMLDMHAKKGYVEIMPPHLVKPQVLEGTGQLPKFEEELYRC-- 221
Query: 198 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---- 253
E+DEL YLI T+E P+ + RD L E LPI + C+R+E
Sbjct: 222 ----------ERDEL---YLIPTAEVPLTNLFRDEILREDQLPIYLTSYTPCYRREAGAY 268
Query: 254 ---------------------------------------DLTKSI--AYRVVNIVSGALN 272
D+ +++ YRVV + +G +
Sbjct: 269 GKDIRGIIRQHQFNKVELVKIVKPEDSYRELEGLTSDAEDILRALELPYRVVLLCTGDMG 328
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 332
++AK D+E WFP +RE+ SCSNC ++Q+RR+ RY K N +VH LN +A
Sbjct: 329 FSSAKTYDIEVWFPSQSRYREVSSCSNCEEFQARRMGTRYKDQKGRN---IYVHTLNGSA 385
Query: 333 CATTRVICAILETHQTETG-VRIPDCLRKFVPA 364
A R + AILE +Q E G V +P LR +V A
Sbjct: 386 LAIGRTLAAILENYQREDGSVIVPHALRDYVKA 418
>gi|225552155|ref|ZP_03773095.1| seryl-tRNA synthetase [Borrelia sp. SV1]
gi|225371153|gb|EEH00583.1| seryl-tRNA synthetase [Borrelia sp. SV1]
Length = 425
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 162/337 (48%), Gaps = 71/337 (21%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKG---DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGY 139
N L P VP+ ++E++N ++ G + + K H++L +D +D + ++G + Y
Sbjct: 104 NILSPDVPIGSSEEDNFEIKRVGVVPQFDFKPK-DHLELGRDLDLLDFDRAREISGSKFY 162
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
+LK AV L++ L+ ++L+K EKG+ TP +VA+ E + IG
Sbjct: 163 YLKNEAVFLEIALINFSLNKLREKGFDVFITP---------DVAR-----EFIVDGIGFN 208
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----D 254
+ +S K E DKYL+ TSE + + + + + +LPIR G S CFR+E
Sbjct: 209 PRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAGAYGQ 267
Query: 255 LTKS----------------------------------------IAYRVVNIVSGALNHA 274
L+K I YRV+NI S L
Sbjct: 268 LSKGLYRVHQFSKVEMFCFCKAEESGVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGSP 327
Query: 275 AAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
A KK D+EAW PG G + E+ S SNC DYQSRRL +RY N +F HM+N T
Sbjct: 328 AYKKYDIEAWMPGRDGKGGYGEITSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNGT 384
Query: 332 ACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
A ATTRVI +ILE Q + G+RIP L K+ Y+
Sbjct: 385 AIATTRVIISILENFQDQKGGIRIPKSLVKYTGFDYI 421
>gi|134096775|ref|YP_001102436.1| seryl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
gi|133909398|emb|CAL99510.1| seryl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
Length = 395
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 163/364 (44%), Gaps = 77/364 (21%)
Query: 53 FNKFKNLCSKVI---GEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKG---- 105
K K L ++V E+ +A + + ++ N + P VP ED+ +++ G
Sbjct: 45 LKKAKELSAQVKDAEAEQAEADQALVEAQKKLSNIVGPGVP-PGGEDDYAVLKHVGVPPE 103
Query: 106 -DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKG 164
D EV+ H++L T + +D E GA VAG R YFL G L++ L+ A + G
Sbjct: 104 FDFEVK---DHLELGTSLGAMDMERGAKVAGARFYFLTGIGAQLELALLNMAAAHATANG 160
Query: 165 YTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQP 224
+T + P +R E+M+ L E+Y++ E DD YL+ TSE P
Sbjct: 161 FTLVVPPVLVRPEIMEGTGFLGAHSSEVYRL---------------EEDDLYLVGTSEVP 205
Query: 225 ICAVHRDSWLPEASLPIRYLGVSTCFRQED------------------------------ 254
+ H + + P+RY G S+CFR+E
Sbjct: 206 LAGYHSGEIIDLGAGPLRYAGWSSCFRREAGSYGRDTRGIIRVHQFNKLEMFVYCREEDA 265
Query: 255 --------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSN 299
L K + YRV++ +G L +AA+K D EAW P +REL S SN
Sbjct: 266 VAEHERLLGWEEEMLAKIEVPYRVIDTAAGDLGASAARKYDCEAWIPSQQTYRELTSTSN 325
Query: 300 CLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCL 358
C +Q+RRL RY ++ + LN T ATTR I AILE HQ G VR+P+ L
Sbjct: 326 CTTFQARRLNTRY---READGPTRIAATLNGT-LATTRWIVAILENHQQADGSVRVPEAL 381
Query: 359 RKFV 362
R F+
Sbjct: 382 RPFL 385
>gi|422939641|ref|ZP_16967017.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
gi|339890284|gb|EGQ79434.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
Length = 421
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 187/440 (42%), Gaps = 110/440 (25%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAK----- 71
E +++ K+R NV++ D +E D K R+ + +N + +N S I K K
Sbjct: 12 EMLKEMLKNRNSNVDM-DAFVELDSKRREVLSEVENLKRERNNVSAEIANLKKEKKDASH 70
Query: 72 -----------------------EPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTE 108
E + D N HPS P+ +E+ N +R G+
Sbjct: 71 LIEKMGGVSAKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIGPDENYNLEIRKWGEP- 129
Query: 109 VRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS-KWIE 162
KK++ H D+ + +D E GA ++G R +G A L+ L+ + L +E
Sbjct: 130 --KKFNFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALINFMLDVHTLE 187
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSE 222
+GYT TPF ++ EV + QL +F+E++YK DD YLI+TSE
Sbjct: 188 EGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTT----------------DDMYLISTSE 231
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------------------- 253
+ +HR L ++ LP Y S CFR+E
Sbjct: 232 ITMTNIHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDAE 291
Query: 254 ----DLTK------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
+L K + YRV+ + SG L +AAK DLE W P +RE+ SC
Sbjct: 292 SSYDELEKMVKNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSC 351
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDC 357
SNC +Q+RR+ ++Y ++ EF H LN + A R + AI+E +Q E G +
Sbjct: 352 SNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFL--- 404
Query: 358 LRKFVPAVYVNEAGEIPFVK 377
VP V + G + +K
Sbjct: 405 ----VPKVLIPYMGGVDVIK 420
>gi|448458677|ref|ZP_21596343.1| seryl-tRNA ligase [Halorubrum lipolyticum DSM 21995]
gi|445809189|gb|EMA59236.1| seryl-tRNA ligase [Halorubrum lipolyticum DSM 21995]
Length = 456
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 192/445 (43%), Gaps = 99/445 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGE-------- 66
+PE VR+ ++ +V+L D++++ D +WR+ + + D+ +N S IGE
Sbjct: 10 NPEVVREALANKGVDVDL-DRILDVDEEWRELKQRGDDLRHERNEVSSKIGELKGAGEEE 68
Query: 67 --------------KMKAKEPVGDSSTLPGNHL--------HPSVPVSNNEDENGIVRTK 104
+++ E D SVPV +E EN R +
Sbjct: 69 AAQEAIERSQELKSELQDIEDRADELEAELEESLLELPQIPQESVPVGADESENVERRRE 128
Query: 105 GDTEVR----KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW 160
G ++R + H DL ++ +D E GA VAGG Y KG L+ L+Q+ L
Sbjct: 129 GFDDLRTLPDEIEPHYDLGEDLEILDFERGAKVAGGGFYVAKGDGARLEHALIQFMLDVH 188
Query: 161 IEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIAT 220
E+GYT ++ P + M+ QL +F E+ Y+V G E D DD +L+ T
Sbjct: 189 REQGYTDVFPPIPVNSASMRGTGQLPKFTEDAYRVEGTNEDEYDD-------DDLWLLPT 241
Query: 221 SEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----DLTKSIA--------------- 260
+E P+ +HRD L LP++Y + FRQE T+ I
Sbjct: 242 AEVPVTNLHRDEILLGEDLPLKYQAYTPNFRQEAGEHGTETRGIVRVHQFNKVEMVNFVR 301
Query: 261 -------------------------YRVVNIVSGALNHAAAKKLDLEAWFPG-------- 287
YR++ + +G L AKK D+E W PG
Sbjct: 302 PEESDERFDGLVDEAEEVLRRLELPYRILEMCTGDLGFTQAKKYDIEVWAPGDDMEEGPE 361
Query: 288 -SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G + E+ S SN D+Q+RR +RY ++ +E E +H LN + A R++ A+LE +
Sbjct: 362 EGGRWLEVSSVSNFEDFQARRAQIRY--REEHHESAEHLHTLNGSGLAVPRIVVAVLEYY 419
Query: 347 QTETG-VRIPDCLRKFVPAVYVNEA 370
Q + G V +P+ LR ++ V E
Sbjct: 420 QNDDGTVTVPEALRPYMGGTEVIEG 444
>gi|386866629|ref|YP_006279623.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. animalis
ATCC 25527]
gi|385700712|gb|AFI62660.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. animalis
ATCC 25527]
Length = 428
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 188/438 (42%), Gaps = 100/438 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR----QFRH--------- 48
+LD+ R PE V+++Q+ R ++VELVD+V+ D + R QF
Sbjct: 1 MLDIQFIREH----PEVVKESQRKRGESVELVDEVLRADEERRSSLKQFEEARARQKEIG 56
Query: 49 ----------KADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA + K L +V K A +T N + P P E
Sbjct: 57 KQVAKAAPDEKAKLIAQTKELSEQVASFKASADTADEQYTTAMWQLSNIVEPQAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L + G+D + G V+G R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGQIRDFAAEGFEPKDHLTLGEEVAGIDMKRGVKVSGSRFYFLRGDVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+ TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAQEHGFILAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED---------------- 254
E DD YL+ TSE + +H + L + P+RY G S+C+R+E
Sbjct: 222 EPDDDYLVGTSEVALAGMHENEILDLSDGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 255 ----------------------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
L K + YRV++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYAKPENSDAEHQKLLAMEEEMLAKVEVPYRVIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P G +REL S SNC YQ+RRL +R + + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTQYQARRLNIR---ERVADGGTSPVATLNGT-LATTRWLVAILEN 397
Query: 346 HQTETG-VRIPDCLRKFV 362
HQ E G + IP +R ++
Sbjct: 398 HQQEDGSIEIPKAMRPYM 415
>gi|325295343|ref|YP_004281857.1| seryl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065791|gb|ADY73798.1| Seryl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 428
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 194/443 (43%), Gaps = 106/443 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRK--NQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNL 59
++D+ L R E PEKV++ +++D+ K + +VD+++ D + R + ++ +N
Sbjct: 1 MIDIKLLRKE----PEKVKELLSRRDK-KYIAMVDELLAVDSERRAIISEVEDLKAKRNK 55
Query: 60 CSKVIG---------EKMKAKEPVGDSS----------------------TLPGNHLHPS 88
SK IG E +K K V S ++P N H S
Sbjct: 56 YSKEIGKLFKEGRKEEALKLKSEVEKISERIVSLEKELTDIEKKFERLILSIP-NPPHVS 114
Query: 89 VPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
VP+ +E++N ++R G+ + H D+ ++ +D E +AG R K
Sbjct: 115 VPIGEDEEDNVVIRYWGEKPEFCFEPLPHWDIAKELNILDFERATKLAGSRFVIYKKWGA 174
Query: 147 CLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
L+ L+ + L GY + PF + + M QL +F+E+LYK+
Sbjct: 175 KLERALINFMLDLHTSNHGYEEIIPPFLVNTKTMTGTGQLPKFEEDLYKI---------- 224
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
E +D +LI T+E P+ +H LPE LP Y + CFR+E
Sbjct: 225 -----ENEDLWLIPTAEVPLTNIHAGEILPEKELPKYYTAYTPCFRREAGAHGRDVRGIM 279
Query: 254 --------DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLD 280
+L K + YRVV + +G L +AAK D
Sbjct: 280 RLHQFNKVELVKIVHPETSYEELEKLVREAEKVLQLLGLHYRVVELCTGDLGFSAAKTYD 339
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
+E W P +RE+ SCSNC D+Q+RR +R+ + N K FVH LN + A R +
Sbjct: 340 IEVWIPSQNKYREISSCSNCEDFQARRAKIRF---RDKNGKTRFVHTLNGSGLAVGRTVI 396
Query: 341 AILETHQTETG-VRIPDCLRKFV 362
AILE +Q E G V +P+ LR ++
Sbjct: 397 AILEQYQQEDGSVIVPEVLRDYI 419
>gi|302386494|ref|YP_003822316.1| seryl-tRNA synthetase [Clostridium saccharolyticum WM1]
gi|302197122|gb|ADL04693.1| seryl-tRNA synthetase [Clostridium saccharolyticum WM1]
Length = 429
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 189/443 (42%), Gaps = 106/443 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKN--VELVDKVIENDLKWRQFRHKADNFNKFKNL 59
+LDL R +PE V++N K++F++ + LVD+VIE D + R+ + + D +N
Sbjct: 1 MLDLKFVRE----NPEIVKENIKNKFQDNKLSLVDEVIELDEQNRKTKQEGDALRAERNK 56
Query: 60 CSKVIGEKMK---------AKEPVGDSS----------------------TLPGNHLHPS 88
SK IG M K+ V D+S T+P N + PS
Sbjct: 57 LSKQIGALMGQGKKEEAEGMKKQVTDASQHLAQLEEKERDLEERIKKIMMTIP-NIIDPS 115
Query: 89 VPVSNNEDENGIVRTKGDT---EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
VP+ ++ EN V G+ E Y H D++ DG+D ++ VAG Y+L G
Sbjct: 116 VPIGKDDSENVEVERYGEPVVPEFDIPY-HTDIMESFDGIDLDSARKVAGNGFYYLMGDI 174
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
L ++ YA I +G+T PF +R EV+ V A+ D +YK+ G
Sbjct: 175 ARLHSSVISYARDFMINRGFTYCVPPFMIRSEVVTGVMSFAEMDAMMYKIEG-------- 226
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
+D YLI TSE + D+ LPE LP S CFR+E
Sbjct: 227 -------EDLYLIGTSEHSMIGKFIDTILPEGKLPQTLTSYSPCFRKEKGAHGLEERGVY 279
Query: 254 -------------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLD 280
DL +S I R + SG L K +D
Sbjct: 280 RIHQFEKQEMIVVCKPEDSMEWYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSVD 339
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
+EAW P + E+ SCSN D Q+RRL +R + + F H LN T A R++
Sbjct: 340 VEAWSPRQKKYFEVGSCSNLGDAQARRLKIRVAGD---DGRKYFAHTLNNTVVAPPRMLI 396
Query: 341 AILETH-QTETGVRIPDCLRKFV 362
A LE + Q + VRIPD L+ ++
Sbjct: 397 AFLENNLQADGTVRIPDALQPYM 419
>gi|381205844|ref|ZP_09912915.1| seryl-tRNA synthetase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 421
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 192/438 (43%), Gaps = 109/438 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNV-ELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
+LDL + R DP K+ +N R +N+ +LV ++E D R + + D + +N
Sbjct: 1 MLDLRVIRQ----DPAKISENC--RLRNLPDLVAPLLEQDELARSLKGELDMLRQRRNEI 54
Query: 61 SKVIGEKMKAKEP---VGDSSTLP-----------------GNHL-------HPSVPVSN 93
S + K+ E + +S +L GN L HP P+
Sbjct: 55 SNQMRAKLSTDEKQILIEESKSLKQNEEVLNVAHQSAEFERGNLLSQIPNLTHPDSPIGT 114
Query: 94 NEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
+E+ N ++R G + + H+ L+ ++ VD E G+ V G + Y+LK AV L++
Sbjct: 115 DEEANKVIREIGKPRIFDFEPKDHLALMESLELVDFEGGSKVVGQKFYYLKNQAVFLELA 174
Query: 152 LVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG-EKVGDSAP--- 207
L QYAL ++G+T TP R V+Q G G + GDSA
Sbjct: 175 LAQYALKLLQDEGFTVHITPDLARASVVQ----------------GTGFQPRGDSAQIYS 218
Query: 208 -EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR--------------- 251
E EL LIAT+E + + + L + LPI G S CFR
Sbjct: 219 LENSEL---CLIATAEITLGGLLSEQILSDDELPILMAGFSHCFRTEAGAAGRESRGLYR 275
Query: 252 ---------------------QEDLTK---------SIAYRVVNIVSGALNHAAAKKLDL 281
E L K I YRVV+I +G L A +K DL
Sbjct: 276 VHQFSKIEMFAFTHPEKSNEMHEKLLKIEERIYCDLGIPYRVVDICTGDLGAPAFRKYDL 335
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAW PG G + E+ S SNC DYQ+RRL +R+ K K +FVHMLN TA A +R + A
Sbjct: 336 EAWMPGRGHWGEVTSTSNCTDYQARRLNIRF---KDSGGKNQFVHMLNGTAIAVSRTLIA 392
Query: 342 ILET-HQTETGVRIPDCL 358
++E Q + V +P CL
Sbjct: 393 LIENGQQVDGSVSLPKCL 410
>gi|406918119|gb|EKD56755.1| hypothetical protein ACD_58C00103G0004 [uncultured bacterium]
Length = 423
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 157/327 (48%), Gaps = 63/327 (19%)
Query: 89 VPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
P+ +E EN ++ + G KK+S H++L +D +D E G V+G RGY+LK
Sbjct: 100 TPIGKDEKENKVIYSWGKL---KKFSFKIKDHIELAKDLDLIDLERGTKVSGFRGYYLKN 156
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
AV LQ+ L+QY L K +G+TP+ TP + K + + +E+Y++ G+
Sbjct: 157 QAVKLQLALMQYTLDKLSAEGFTPMITPTLVHKMALVGSGHFPEAKDEIYQIANPGKLSS 216
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------- 253
A + ++ YL+ T+E + A + L E+ LP+++ G S C+R E
Sbjct: 217 GEAIK----EETYLVGTAEPSLLAYRANEVLDESELPLKFSGFSQCYRSEIGSYGKDLKG 272
Query: 254 -------------------------------DLTKSI------AYRVVNIVSGALNHAAA 276
+++SI Y+VV + +G +
Sbjct: 273 VFRIHEFMKVEQVVICKADYKEAEKMFSKLLAISQSILKDLELPYQVVQMCTGDMGLGKY 332
Query: 277 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATT 336
K D+E W P + A+RE SCSN D+Q RRL +RY +TK + F LN T A+
Sbjct: 333 KMCDVETWMPANNAYRETHSCSNLTDWQMRRLSIRY-KTKDGQKLYPFA--LNNTGIASP 389
Query: 337 RVICAILETHQTETG-VRIPDCLRKFV 362
R++ A+LE HQ E G ++IP L+K+
Sbjct: 390 RILIALLENHQQEDGSIKIPKGLQKYT 416
>gi|386813936|ref|ZP_10101160.1| seryl-tRNA synthase [planctomycete KSU-1]
gi|386403433|dbj|GAB64041.1| seryl-tRNA synthase [planctomycete KSU-1]
Length = 428
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 200/450 (44%), Gaps = 101/450 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ R +P+K+++ ++ +N +D+++E D++ R + + +N S
Sbjct: 1 MLDINFIRN----NPDKIKQAIANKHENAASIDEILELDVQRRSTIYACEQLKGKRNERS 56
Query: 62 KVIGE---------------------------KMKAKEPVGDSSTLPGNHLHPS--VPVS 92
K + E K+KA E ++ L ++ PS P+
Sbjct: 57 KAVNELKKKGQDASGIIEETKKIGDEIKSSEEKLKALESQMNNLLLRIPNI-PSADTPIG 115
Query: 93 NNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
+E +N +V+T G+ +V H +L ++D +D E + ++G LKG L+
Sbjct: 116 KDEKDNVVVKTWGNRKVFDFTPLPHWELGRILDILDLERSSKISGSGFILLKGLGAKLER 175
Query: 151 GLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L + L E GYT L+ PF + + M QL + +E++Y+
Sbjct: 176 ALFSFMLDLHTREHGYTELFPPFLVNRTAMTGTGQLPKLEEDMYRT-------------- 221
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
+DD +L+ T+E P+ +HRD LP+ Y + CFR+E
Sbjct: 222 -AVDDLFLVPTAEVPVTNIHRDEIFSYKDLPVYYTAYTPCFRREAGSYGKDTRGIIRVHQ 280
Query: 254 ----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+L K + YR+V + +G ++ AAAK D+E W
Sbjct: 281 FNKVELVKLVRPETSYHELELLVGNAEKVLQLLGLEYRIVKLCTGDMSFAAAKCYDIEVW 340
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
PG F E+ SCSN D+QSRR+ VR+ + + KI FVH LN + A R + A+LE
Sbjct: 341 SPGLDKFLEVSSCSNFEDFQSRRINVRF---RDEDGKIGFVHTLNGSGLALPRTVIALLE 397
Query: 345 THQTETG-VRIPDCLRKFVPAVYVNEAGEI 373
T+Q + G + IPD L ++ + V + E
Sbjct: 398 TYQQKDGSIVIPDVLYPYMSGIKVIDKKEF 427
>gi|294781766|ref|ZP_06747099.1| serine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
gi|294481876|gb|EFG29644.1| serine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
Length = 421
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 157/349 (44%), Gaps = 80/349 (22%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRK----KYSHVDLITMIDGVDSEAGAIVA 134
T+P N H S P+ +ED N +R G E RK +H D+ + +D E G+ ++
Sbjct: 102 TIP-NVYHSSTPIGPDEDSNKEIRRWG--EPRKFDFEPKAHWDIGEGLGILDFERGSKLS 158
Query: 135 GGRGYFLKGPAVCLQVGLVQYAL-SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELY 193
G R +G A L+ L+ + L + +E GYT TPF ++ EV + QL +F+E++Y
Sbjct: 159 GSRFVLYRGAAARLERALISFMLDTHTLEHGYTEHITPFMVKAEVCEGTGQLPKFEEDMY 218
Query: 194 KVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
K DD YLI+TSE + +HR L ++ LP Y S CFR+E
Sbjct: 219 KTT----------------DDMYLISTSEITMTNIHRKEILEQSELPKYYTAYSPCFRRE 262
Query: 254 ---------------------------------DLTK------------SIAYRVVNIVS 268
+L K + YRV+ + S
Sbjct: 263 AGSYGRDVKGLIRLHQFNKVEMVKITDAESSYDELEKMVNNAETILQRLELPYRVIQLCS 322
Query: 269 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
G L +AAK DLE W P +RE+ SCSNC +Q+RR+ ++Y K+ EF H L
Sbjct: 323 GDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQARRMGLKY----KVTNGSEFCHTL 378
Query: 329 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
N + A R + AI+E +Q E G + VP V + G I +K
Sbjct: 379 NGSGLAVGRTLVAIMENYQQEDGSFL-------VPKVLIPYMGGIDVIK 420
>gi|374604037|ref|ZP_09677008.1| seryl-tRNA synthetase [Paenibacillus dendritiformis C454]
gi|374390393|gb|EHQ61744.1| seryl-tRNA synthetase [Paenibacillus dendritiformis C454]
Length = 425
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 187/439 (42%), Gaps = 100/439 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD + R E +V + + R K E++ + E D + R+ + + +N+ S
Sbjct: 1 MLDTKVLRNEFA----RVEQALEQRGKAKEMIGEFPELDARRREMLQETEQLKNRRNVVS 56
Query: 62 KVIGEKMKAKEPVGDSST-----------------------------LPGNHLHPSVPVS 92
+ + +K KA E D T +P N H SVPV
Sbjct: 57 QEVAKKKKAGESADDLITEMREVGDRIKELDEEIRNIDAQIVEMTLAIP-NVPHESVPVG 115
Query: 93 NNEDENGIVR--TKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
E+EN +R ++ + + +H D+ + +D EA A V G R F K L+
Sbjct: 116 LKEEENVEIRRWSEATSFSFEPKAHWDVAQDLGILDFEAAAKVTGSRFVFYKKAGARLER 175
Query: 151 GLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + L ++ GY + P + ++ + QL +F+E+L+K+ G
Sbjct: 176 ALISFMLDVHTMQNGYEEILPPLIVNRDSLIGTGQLPKFEEDLFKLEGT----------- 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D +LI T+E P+ +HRD L LP Y S CFR E
Sbjct: 225 ----DYFLIPTAEVPVTNLHRDEILNVEDLPRYYTAYSACFRSEAGAAGRDTRGLIRQHQ 280
Query: 254 --------------------DLTK---------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
LT+ + YRV+ + +G L ++AK DLE W
Sbjct: 281 FNKVEMVKLVKPEDSYEELESLTRHAESILQQLKLPYRVMALCTGDLGFSSAKTYDLEVW 340
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P SG +RE+ SCSN D+Q+RR +R+ + K K EFVH LN + A R + AILE
Sbjct: 341 LPSSGTYREISSCSNFEDFQARRANIRFRRDAK--SKPEFVHTLNGSGLAIGRTVAAILE 398
Query: 345 THQTETG-VRIPDCLRKFV 362
+Q G V IPD LR ++
Sbjct: 399 NYQQADGSVVIPDALRPYM 417
>gi|407472560|ref|YP_006786960.1| seryl-tRNA ligase SerS [Clostridium acidurici 9a]
gi|407049068|gb|AFS77113.1| seryl-tRNA ligase SerS [Clostridium acidurici 9a]
Length = 424
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 77/333 (23%)
Query: 87 PSVP-----VSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGG 136
P++P V ++++N +R G D EV+ H DL T +D +D E + G
Sbjct: 104 PNIPNADIVVGASDEDNVEIRKVGEPHNFDFEVK---PHWDLGTDLDILDFERATKLTGA 160
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV 195
R KG L+ L+ + LS K GYT + PF + ++ M QL +F+E+++K+
Sbjct: 161 RFTLFKGLGATLERALINFMLSTHTTKHGYTEVSPPFMVNRQSMIGTGQLPKFEEDMFKI 220
Query: 196 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-- 253
G+ + YLI T+E P+ +HRD L E LP+ Y + CFRQE
Sbjct: 221 SGR---------------EFYLIPTAEVPVTNIHRDEILDEEKLPLYYTAYTPCFRQEAG 265
Query: 254 ------------------DLTK-------------------------SIAYRVVNIVSGA 270
+L K +I YRVV + +G
Sbjct: 266 SAGRDTRGIIRNHQFDKIELVKLVKPESSYEELEKLTDNAEQILKALNIPYRVVELCTGD 325
Query: 271 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNA 330
+ ++AK D+E W P G + E+ SCSN D+Q+RR +RY K K EFVH LN
Sbjct: 326 IGFSSAKTYDIEVWMPSYGRYVEISSCSNFEDFQARRANLRY--RSKETGKPEFVHTLNG 383
Query: 331 TACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+ A R + A+LE +Q E G + IP+ LR F+
Sbjct: 384 SGLAVGRTLAALLENYQQEDGSIVIPEALRPFM 416
>gi|415705666|ref|ZP_11460937.1| seryl-tRNA synthetase [Gardnerella vaginalis 75712]
gi|388052388|gb|EIK75412.1| seryl-tRNA synthetase [Gardnerella vaginalis 75712]
Length = 428
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 192/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWR----------------- 44
+LD+ R + V+++Q+ R ++VELVD+V+ D R
Sbjct: 1 MLDIQFIREH----ADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIG 56
Query: 45 ------QFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
Q K + K L KV K ++++ D +T N + P E
Sbjct: 57 KKVAAAQDSEKVTLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G VAG R YFL+G LQ+
Sbjct: 116 DDYVVVKKVGTPRDFTAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H D L ++ +RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 -------------------------QEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QE L K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYCKQEDSHAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL VR ++M + V LN T ATTR + AILE
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNVR----ERMEDGGTRPVSTLNGT-LATTRWLVAILE 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ E G + IP ++ ++
Sbjct: 397 NHQHEDGSIDIPKAMQAYM 415
>gi|126460407|ref|YP_001056685.1| seryl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
gi|166223275|sp|A3MX52.1|SYS_PYRCJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|126250128|gb|ABO09219.1| seryl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
Length = 454
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 186/440 (42%), Gaps = 113/440 (25%)
Query: 16 PEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKM------- 68
PE+VRK R + LVDK + D KWRQ + + D N S+ G K
Sbjct: 13 PEEVRKVLLARRVDASLVDKFLALDAKWRQLKKEIDELRHLYNQLSRE-GAKAPPERRRE 71
Query: 69 ---KAKEPVGDSS------------------TLPGNHLHPSVPVSNNEDENGIVRTKGDT 107
KA+E + P N +H SVPV ++ VR G
Sbjct: 72 ISEKARELAAKLEKVEEEVKELERQREELLYSFP-NLIHESVPVCPEGVDSVPVRHWGTV 130
Query: 108 EV------------------RKKYSHVDLI-TMIDGVDSEAGAIVAGGRGYFLKGPAVCL 148
+V ++ H D+ ++ D+ VAG R Y+L V L
Sbjct: 131 KVSNAALQSLDPGVEYVVVEKEPVGHADMAEVVLQMADTLKAGEVAGSRFYYLFDDLVWL 190
Query: 149 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPE 208
L YA+ + +KG+ P+ P+ ++ ++++ V F + +YK+ G
Sbjct: 191 DFALAMYAMDQLAQKGFRPVIPPYMLKFDIIRRVLDFDTFKDAIYKIEG----------- 239
Query: 209 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------------- 253
+D YLIAT+E I A L E LP Y+G S CFR+E
Sbjct: 240 ----EDLYLIATAEHGIAAYLYKRELLEEELPQLYVGWSPCFRKEAGAGNRDLKGIFRVH 295
Query: 254 ---------------------DLTKS---------IAYRVVNIVSGALNHAAAKKLDLEA 283
++T++ + YRVVNI + L AAKK D+E
Sbjct: 296 IFHKVEQFVFSLPEESWKWHEEITRNTEELIRGLGLPYRVVNICAHDLGAPAAKKYDIEV 355
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
W+P +REL SCSN D+QS RL +R T+K +K E+VH LN T ATTR I AIL
Sbjct: 356 WYPAQAKYRELASCSNVTDWQSYRLGIRV--TRKGMKK-EYVHTLNCTGLATTRTITAIL 412
Query: 344 ETHQTETG-VRIPDCLRKFV 362
E Q + G V IP LR ++
Sbjct: 413 ENFQRDDGVVEIPKALRPYL 432
>gi|404421062|ref|ZP_11002789.1| seryl-tRNA ligase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
gi|403659414|gb|EJZ14063.1| seryl-tRNA ligase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
Length = 418
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 185/434 (42%), Gaps = 97/434 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR +Q+ R ++ VD ++E D R ADN + S
Sbjct: 1 MIDLKLLRE----NPDSVRASQRARGEDPARVDALLEADTARRAAISTADNLRADQKAAS 56
Query: 62 KVIGEKMKAKEPV--------------------------GDSSTLPGNHLHPSVPVSNNE 95
K++G+ + P + GN + VP + E
Sbjct: 57 KLVGKATPEERPALLQQAKDLAEQVKAAEAAQAEAESAFTAAHMAIGNVIIDGVP-AGGE 115
Query: 96 DENGIVRTKGDTE-VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQ 154
D+ ++ T G+ + H++L + +D E GA V+G R YFL G LQ+GL+Q
Sbjct: 116 DDFVVLDTVGEPRAIENPKDHLELGEALGLIDMERGAKVSGSRFYFLTGAGALLQLGLLQ 175
Query: 155 YALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD 214
A + G+T + P +R EVM L +E+Y++ E DD
Sbjct: 176 LATQVAVRNGFTLMIPPVLVRPEVMAGTGFLGAHADEVYRL---------------EADD 220
Query: 215 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS---------------- 258
YL+ TSE P+ H L + P RY G S+CFR+E +
Sbjct: 221 LYLVGTSEVPLAGYHSGEILDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVE 280
Query: 259 -----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 289
+ YRV+++ +G L +AA+K D EAW P
Sbjct: 281 GFVYCKPEDAEAEHQKLLGWQREMLAAIEVPYRVIDVAAGDLGSSAARKYDCEAWVPTQQ 340
Query: 290 AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTE 349
+REL S SNC +Q+RRL RY + N K + LN T ATTR + AILE HQ
Sbjct: 341 TYRELTSTSNCTTFQARRLATRY---RDENGKPQIAATLNGT-LATTRWLVAILENHQQP 396
Query: 350 TG-VRIPDCLRKFV 362
G VRIPD L FV
Sbjct: 397 DGTVRIPDALVPFV 410
>gi|213693031|ref|YP_002323617.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|384200259|ref|YP_005586002.1| seryl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|254783008|sp|B7GN83.1|SYS_BIFLS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|213524492|gb|ACJ53239.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|320459211|dbj|BAJ69832.1| seryl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
Length = 428
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 190/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQF--------------- 46
+LD+ R + V+++Q+ R ++VELVD+V+ +D R+
Sbjct: 1 MLDIQFIREH----TDIVKESQRKRGESVELVDEVLSSDTARREALKAFEEARAQQKEIG 56
Query: 47 --------RHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA + K L V K KA + +T N + P P E
Sbjct: 57 KKVASVPADEKAKLIAETKELSQTVAEYKAKADSAAEEYTTAMWRLSNIVEPEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L + G+D G V G R YFL+G +Q+
Sbjct: 116 DDYVVVKKVGQIRDFAAEGFEPKDHLTLGAGVAGIDMRRGVKVGGSRFYFLRGQVARMQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H + L + P+RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 ----------QEDLTK----------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QED K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYAKQEDSYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P G +REL S SNC +YQ+RRL +R ++M + V LN T ATTR + AI+E
Sbjct: 342 PTQGRYRELTSTSNCTEYQARRLNIR----ERMEDGGTRPVSTLNGT-LATTRWLVAIME 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ + G + IP +R ++
Sbjct: 397 NHQQKDGSIEIPKAMRAYM 415
>gi|254303605|ref|ZP_04970963.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|422339058|ref|ZP_16420018.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|148323797|gb|EDK89047.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|355371404|gb|EHG18752.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 421
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 190/441 (43%), Gaps = 112/441 (25%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAK----- 71
E +++ K+R NV++ D +E D K R+ + +N + +N S I K K
Sbjct: 12 EMLKEMLKNRNSNVDM-DAFVELDSKRREVLSEVENLKRERNNASAEIANLKKEKKDANH 70
Query: 72 --EPVGDSS----------------------TLPGNHLHPSVPVSNNEDENGIVRTKGDT 107
E +G+ S +P N H S P+ +E+ N +R G
Sbjct: 71 IIEKMGEVSAKIKDLDAELVEIDEKIKDIQLNIP-NVYHSSTPIGPDEEHNLEIRKWG-- 127
Query: 108 EVRKKY-----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS-KWI 161
V KK+ SH D+ + +D E GA ++G R +G A L+ L+ + L +
Sbjct: 128 -VPKKFDFEPKSHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALINFMLDVHTL 186
Query: 162 EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
E+GYT TPF ++ EV + QL +F+E++YK DD YLI+TS
Sbjct: 187 EEGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTT----------------DDMYLISTS 230
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------------- 253
E + +HR L ++ LP Y S CFR+E
Sbjct: 231 EITMTNIHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDA 290
Query: 254 -----DLTK------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVS 296
+L K + YRV+ + SG L +AAK DLE W P +RE+ S
Sbjct: 291 ESSYDELEKMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISS 350
Query: 297 CSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPD 356
CSNC +Q+RR+ ++Y ++ EF H LN + A R + AI+E +Q E G +
Sbjct: 351 CSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFL-- 404
Query: 357 CLRKFVPAVYVNEAGEIPFVK 377
VP V + G + +K
Sbjct: 405 -----VPKVLIPYMGGLDVIK 420
>gi|398817866|ref|ZP_10576470.1| seryl-tRNA synthetase [Brevibacillus sp. BC25]
gi|398029145|gb|EJL22632.1| seryl-tRNA synthetase [Brevibacillus sp. BC25]
Length = 426
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 190/445 (42%), Gaps = 106/445 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ + R D E+V++ R +++ +D+ +E D K R+ +A+ +N S
Sbjct: 1 MLDVKVLRQ----DLEEVKRRLAHRNEDISALDQFVEVDEKRREVIQEAEALKNKRNTVS 56
Query: 62 --------------------KVIGEKMKA-KEPVGDSS--------TLPGNHLHPSVPVS 92
K + E++KA E + +LP N H S P+
Sbjct: 57 EQVAVMKRNKENADHLIAEMKEVNERIKALDEELRQLDEQLEFILLSLP-NLPHESTPIG 115
Query: 93 NNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
ED+N I T G D E++ H +L + +D E V G R F KG
Sbjct: 116 TTEDDNVIAWTWGEPRAFDFEIK---PHWELASQAGILDFETAGKVTGSRFVFYKGLGAR 172
Query: 148 LQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + + E GY + P+ + + M QL +F+E+ +K+ G
Sbjct: 173 LERALMNFMMDLHSNEHGYEEVIPPYIVNRTSMTGTGQLPKFEEDAFKIEGP-------- 224
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
D +LI T+E P+ +HRD + A LP Y S CFR E
Sbjct: 225 -------DYFLIPTAEVPVTNMHRDEIMDGADLPRYYTAFSACFRSEAGSAGRDTRGLIR 277
Query: 254 -------DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDL 281
+L K + YRV+++ +G L AAKK DL
Sbjct: 278 QHQFNKVELVKFVKPEESYDELDKLVKNAEKVLQLLGLPYRVLSMCTGDLGFTAAKKFDL 337
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W P G +RE+ SCSN D+Q+RR +R+ + K K EFVH LN + A R + A
Sbjct: 338 EVWIPSGGTYREISSCSNFEDFQARRANIRFRRDTK--SKPEFVHTLNGSGLAIGRTVAA 395
Query: 342 ILETHQTETG-VRIPDCLRKFVPAV 365
ILE +Q G + IP+ LR ++ V
Sbjct: 396 ILENYQDADGAIVIPEVLRPYMGGV 420
>gi|119963396|ref|YP_945932.1| seryl-tRNA synthetase [Arthrobacter aurescens TC1]
gi|166200596|sp|A1R120.1|SYS_ARTAT RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|119950255|gb|ABM09166.1| seryl-tRNA synthetase [Arthrobacter aurescens TC1]
Length = 426
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 192/435 (44%), Gaps = 104/435 (23%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQ--FRHKA--DNFNKFKNLCSKVIGEKMKA 70
+P+K R +Q+ R + +VD +I D R RH+ N F ++ GE+ +A
Sbjct: 10 NPDKFRASQRARGADESVVDAIISADSDRRAALIRHETLRAEQNAFGKKVAQAKGEEKQA 69
Query: 71 -----KEPVGDSS------------------TLPGNHLHPSVPVSNNEDENGIVRTKGD- 106
KE +P N + VP ED+ +++T G
Sbjct: 70 LLAEVKELANSVKAASAEAAAAQAKQEELLRVIP-NLVVDGVP-EGGEDDYVVLKTVGTP 127
Query: 107 ---TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK 163
T+ K H+++ +I +D E GA V+G R YFL+G L++ L+Q A+ + I+
Sbjct: 128 REFTDFEPK-DHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALLQMAMEQAIDA 186
Query: 164 GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQ 223
G+ P+ TP +R E MQ + D E+Y++ DD YL+ TSE
Sbjct: 187 GFVPMITPTLVRPETMQGTGFDVKHDAEIYRLAE---------------DDLYLVGTSEV 231
Query: 224 PICAVHRDSWLPEASLPIRYLGVSTCFRQED----------------------------- 254
+ H D L ++ PIRY G S+C+R+E
Sbjct: 232 ALAGYHADEILDLSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEE 291
Query: 255 ---------------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 298
L K + YRV++ +G L +AA+K D EAW P A+REL S S
Sbjct: 292 AAAEHERLLAWEEEMLAKCELPYRVIDTAAGDLGMSAARKFDCEAWVPTQNAYRELTSTS 351
Query: 299 NCLDYQSRRLLVRYGQTKKMNEK-----IEFVHMLNATACATTRVICAILETHQTETG-V 352
NC +Q+RRL +R + +N++ V LN T ATTR I AILE HQ G V
Sbjct: 352 NCTTFQARRLNIR---ERVINDEGVAKGTRAVATLNGT-LATTRWIVAILEHHQNPDGSV 407
Query: 353 RIPDCLRKFVPAVYV 367
+P L+K++ + V
Sbjct: 408 NVPKALQKYLGGLEV 422
>gi|407796851|ref|ZP_11143802.1| seryl-tRNA ligase [Salimicrobium sp. MJ3]
gi|407018749|gb|EKE31470.1| seryl-tRNA ligase [Salimicrobium sp. MJ3]
Length = 424
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 190/438 (43%), Gaps = 98/438 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL R G EK+R +R +++ +D E D + R+ +++ +N S
Sbjct: 1 MLDLKYVRQNFGEVKEKLR----ERGEDLSELDSFEELDTRRRELIRESEELKAKRNEVS 56
Query: 62 KVIG----------EKMKAKEPVGDS-STLPG-----------------NHLHPSVPVSN 93
K I EK+K + VG+ TL G N H S PV +
Sbjct: 57 KEISQLKKEKQDADEKIKEMQEVGERIKTLDGELKETEERLQTILLSIPNIPHESTPVGS 116
Query: 94 NEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
+ED+N + R+ GD + +H DL + +D E A V G R F KG L+
Sbjct: 117 DEDDNVLTRSWGDITSFGFEPKAHWDLAGNLGILDFERAAKVTGSRFVFYKGAGARLERA 176
Query: 152 LVQYALSKWIE-KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
L+ + + + GY + P + ++ M QL +F+E+ +K+ G
Sbjct: 177 LLNFMMDHHADTHGYEEMLPPQIVNRDSMTGTGQLPKFEEDAFKLEGW------------ 224
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
D +LI T+E P+ HRD LP LP + + ST FR E
Sbjct: 225 ---DYFLIPTAEVPVTNYHRDEILPIDELPKKLVAFSTNFRSEAGSAGRDTRGLVRQHQF 281
Query: 254 ------DLTK----------------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
L+K + YRV+++ +G L AAKK D+E W
Sbjct: 282 NKVELVQLSKPEESYERLEELTGHAEKILQMLELPYRVMSMCTGDLGFTAAKKYDIEVWI 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
P +RE+ SCSN +Q+RR +R+ + K N K EFVH LN + A R + AILE
Sbjct: 342 PSYETYREISSCSNFEAFQARRAGIRFRREK--NGKPEFVHTLNGSGLAIGRTVAAILEN 399
Query: 346 HQTETG-VRIPDCLRKFV 362
+Q E G V IP+ LR ++
Sbjct: 400 YQQEDGTVVIPEVLRPYM 417
>gi|239825598|ref|YP_002948222.1| seryl-tRNA synthetase [Geobacillus sp. WCH70]
gi|259511672|sp|C5D340.1|SYS_GEOSW RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|239805891|gb|ACS22956.1| seryl-tRNA synthetase [Geobacillus sp. WCH70]
Length = 424
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 151/329 (45%), Gaps = 72/329 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYF 140
H SVPV +E++N VR G+ + +S H D+ + +D E A V G R F
Sbjct: 109 HESVPVGKSEEDNVEVRKWGEP---RSFSFEPKPHWDIAEQLGILDFERAAKVTGSRFVF 165
Query: 141 LKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
KG L+ L+ + L IE+ GY + P+ + + M QL +F+E+ +++
Sbjct: 166 YKGLGARLERALINFMLDVHIEEFGYQEILPPYLVNRASMTGTGQLPKFEEDAFRI---- 221
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
E DD +LI T+E P+ +HRD L LPI Y+ S CFR E
Sbjct: 222 -----------ETDDYFLIPTAEVPVTNLHRDEILSAEDLPIYYVAYSACFRAEAGSAGR 270
Query: 254 --------------DLTK-------------------------SIAYRVVNIVSGALNHA 274
+L K + YRVV + +G L +
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYDELEKLTNQAERILQLLGLPYRVVCLCTGDLGFS 330
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
+AK D+E W P G +RE+ SCSN +Q+RR +R+ + K K E+VH LN + A
Sbjct: 331 SAKTYDIEVWLPSYGTYREISSCSNFEAFQARRANIRFRREPKA--KPEYVHTLNGSGLA 388
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFV 362
R + AILE +Q E G V IP+ LR ++
Sbjct: 389 IGRTVAAILENYQQEDGTVVIPEVLRPYM 417
>gi|315652083|ref|ZP_07905084.1| serine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485730|gb|EFU76111.1| serine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 427
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 193/442 (43%), Gaps = 104/442 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKN--VELVDKVIENDLKWRQFRHKADNFNKFKNL 59
++D+ R +P++VR+N K++F++ + LVD+VIE D K R+ + +AD +N
Sbjct: 1 MIDIKFLRE----NPDEVRQNIKNKFQDFKLPLVDEVIELDEKLRKTKVEADELRAKRNK 56
Query: 60 CSKVIG-----------EKMKAK-----------EPV---------GDSSTLPGNHLHPS 88
SK IG E++KA EP+ D T+P N + PS
Sbjct: 57 ISKEIGTLMAQGKKEEAEQVKASVASLGEQLAKLEPIEADLEEKIKKDMMTIP-NIIDPS 115
Query: 89 VPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
VP+ ++ EN + G+ V + H +++ ++G+D ++ VAG Y+L G
Sbjct: 116 VPIGKDDSENVEIEKFGEPFVPDFEIPYHTEIMEKLNGIDLDSARKVAGNGFYYLMGDIA 175
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L ++ YA I++G+T PF +R EV+ V A+ D +YK+ G
Sbjct: 176 RLHSAVISYARDFMIDRGFTYCVPPFMIRSEVVTGVMSFAEMDAMMYKIEG--------- 226
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
+D YLI TSE + D+ EA LP S CFR+E
Sbjct: 227 ------EDLYLIGTSEHSMIGKFIDTMNEEAKLPYTLTSYSPCFRKEKGAHGIEERGIYR 280
Query: 254 ------------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLDL 281
DL +S I R + SG L K D+
Sbjct: 281 IHQFEKQEMIVVCKPEESKMWYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSCDV 340
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
EAW P + E+ SCSN D Q+RRL +R K N F H LN T A R++ A
Sbjct: 341 EAWSPRQKKYFEVGSCSNLGDAQARRLRIR---VKDENGNKYFAHTLNNTVVAPPRMLIA 397
Query: 342 ILETHQTETG-VRIPDCLRKFV 362
LE + E G +RIP+ LR ++
Sbjct: 398 FLENNLNEDGSIRIPEVLRPYM 419
>gi|300853245|ref|YP_003778229.1| seryl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
gi|300433360|gb|ADK13127.1| seryl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
Length = 426
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 169/372 (45%), Gaps = 83/372 (22%)
Query: 45 QFRHKADNFNKFKNLCSKVIG--EKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVR 102
+ +H +DN ++ S++ G E + + P N +P+VP ++++N +R
Sbjct: 77 EMKHVSDNIKQYDTELSELNGKIEYIMLRIP---------NIPNPAVPEGKSDEDNVEIR 127
Query: 103 -----TKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYAL 157
TK D K +H D+ T +D +D E G V+G R F KG L+ ++ Y L
Sbjct: 128 KWSEPTKFDF---KPKAHWDIGTDLDILDFERGGKVSGSRFTFYKGLGAKLERAIITYYL 184
Query: 158 SKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKY 216
EK GYT + P+ + + M QL +F+E+ +++ +D +
Sbjct: 185 DFHTEKHGYTEILPPYMVNRTSMTGTGQLPKFEEDAFRISN---------------NDYF 229
Query: 217 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------------- 251
LI T+E P+ HRD L +LP++Y+ S CFR
Sbjct: 230 LIPTAEVPVTNFHRDEVLKGENLPLKYVAYSACFRAEAGSAGRDTRGIIRQHQFNKVEMV 289
Query: 252 ------------------QEDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAF 291
ED+ K I YRVV I G L AA K D+E W P +
Sbjct: 290 KFTKPEESYDELEKLTNDAEDVLKGLKIPYRVVRICKGDLGFTAALKYDIEVWMPSYNRY 349
Query: 292 RELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG 351
E+ SCSN D+Q+RR ++Y +T K +K +VH LN + A R + AILE +Q E G
Sbjct: 350 VEISSCSNFEDFQARRANIKYKETPK--DKPRYVHTLNGSGVAIGRTVAAILENYQQEDG 407
Query: 352 -VRIPDCLRKFV 362
V IP+ LR ++
Sbjct: 408 SVIIPEILRPYM 419
>gi|315605628|ref|ZP_07880661.1| serine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
gi|315312583|gb|EFU60667.1| serine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
Length = 424
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 182/432 (42%), Gaps = 101/432 (23%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPV 74
+PE R +Q+ R N +LVD++I D K R+ +N + SK +G K + P
Sbjct: 10 NPEPARASQRARGANPDLVDEIIAADAKRREALQAFENLRATQKEVSKSVGRASKEERPA 69
Query: 75 ---------------------GDSST------LPGNHLHPSVPVSNNEDENGIVRTKGDT 107
D+ LP N + VPV ED ++R +G T
Sbjct: 70 ILAKAKELAEQVKEAEGRAGAADAEADRLARLLP-NLIVDGVPVGGEEDFV-VLRHEGPT 127
Query: 108 ------EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWI 161
E + H+ + +D +D++ GA V+G R Y+LKG L++ L+ A+ + +
Sbjct: 128 PRDFAAEGFEAKDHLAIGEGLDAIDTKRGAKVSGARFYYLKGIGARLELALMTMAMDQAL 187
Query: 162 EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
G+ P+ TP + +VM L + +E+Y + DD YL TS
Sbjct: 188 ANGFVPMMTPTLVTPQVMGGTGFLNEHSDEIYYLPA---------------DDLYLTGTS 232
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------------------- 258
E + H D L + P RY+G STC+R+E +
Sbjct: 233 EVALAGYHADEILDLSGGPKRYMGWSTCYRREAGSAGKDTRGIIRVHQFNKAEMFSYCRP 292
Query: 259 ----------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVS 296
+ YRV++ +G L +AA+K D EAW P + E+ S
Sbjct: 293 EDAAEEHQRFLAWEEEMLAKVELPYRVIDTAAGDLGTSAARKFDCEAWLPTQERYMEVTS 352
Query: 297 CSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIP 355
SNC +Q+RRL +R + M V LN T ATTR I AILE HQ G V +P
Sbjct: 353 TSNCTTFQARRLGIRERREGGMAP----VATLNGT-LATTRWIVAILENHQRADGSVYVP 407
Query: 356 DCLRKFVPAVYV 367
+ LR ++ + V
Sbjct: 408 EALRPYLGGLEV 419
>gi|337280683|ref|YP_004620155.1| seryl-tRNA synthetase [Ramlibacter tataouinensis TTB310]
gi|334731760|gb|AEG94136.1| candidate seryl-tRNA synthetase (Serine--tRNA ligase) [Ramlibacter
tataouinensis TTB310]
Length = 425
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 156/341 (45%), Gaps = 62/341 (18%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGR 137
N H SVP+ +E N VR G D VR HVD+ + G+D AG +AG R
Sbjct: 95 NLPHESVPLGADEHGNVKVREWGTPRAFDFPVR---DHVDIGEPL-GLDFGAGVKLAGAR 150
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVI 196
+KGP L L Q+ L ++ GYT YTP+ + E ++ QL +F+ +L+
Sbjct: 151 FSVMKGPIARLHRALAQFMLDVQTQQHGYTECYTPYIVNAETLRGTGQLPKFEADLFAA- 209
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---- 252
KG + G++A E L YLI TSE + + RD L EA LPIR + CFR
Sbjct: 210 KKGGQEGEAASEDGAL---YLIPTSEVTLTNLVRDEVLAEAQLPIRLTAHTPCFRSEAGS 266
Query: 253 --------------------------------EDLTK---------SIAYRVVNIVSGAL 271
E++T + YRV+ + +G +
Sbjct: 267 AGRDTRGMIRQHQFDKVEMVQIVHPERSHEALEEMTGHAEAVLQQLGLPYRVMLLCTGDM 326
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
AAK DLE W P G +RE+ S SNC +Q+RRL RY + K E VH LN +
Sbjct: 327 GFGAAKTYDLEVWVPAQGTYREISSVSNCEAFQARRLQARYKTAQ--GGKNELVHTLNGS 384
Query: 332 ACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAG 371
A R + A+LE +Q G V +P+ LR ++ V AG
Sbjct: 385 GLAVGRTLVAVLENYQNADGSVTVPEVLRPYLGGATVLRAG 425
>gi|345863862|ref|ZP_08816069.1| serine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345876880|ref|ZP_08828641.1| hypothetical protein Rifp1Sym_ai00190 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226080|gb|EGV52422.1| hypothetical protein Rifp1Sym_ai00190 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|345124972|gb|EGW54845.1| serine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 422
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 151/333 (45%), Gaps = 70/333 (21%)
Query: 86 HPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
H SVP +E++N R G D E + HVDL +D+EA A + G R
Sbjct: 108 HESVPDGKDEEDNREERRWGEPPQFDFEAK---DHVDLGIENGLLDAEAAAKLTGSRFTV 164
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
+ GP + L+Q L I+ GYT Y P+ + + ++ QL +F+EEL+K+ G+ E
Sbjct: 165 MSGPLARMHRALIQLMLDTHIQHGYTEAYVPYLVNSDSLRGTGQLPKFEEELFKLQGEHE 224
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------- 253
YLI T+E P+ + RD + +P RY+ + CFR E
Sbjct: 225 Y--------------YLIPTAEVPLTNLVRDVIIDADEMPRRYVAHTPCFRSEAGSYGKD 270
Query: 254 -----------------------------DLTK---------SIAYRVVNIVSGALNHAA 275
LT + YRVV + +G + +A
Sbjct: 271 TRGMIRQHQFEKVELVQIVRAEDSFDALEQLTSHAEAILQKLELPYRVVTLCTGDIGFSA 330
Query: 276 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACAT 335
K DLE W PG G +RE+ SCSN +D+Q+RRL R+ + K E VH +N + A
Sbjct: 331 TKTYDLEVWLPGQGKYREISSCSNFVDFQARRLQARWRNPE--TGKPELVHTVNGSGLAV 388
Query: 336 TRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
R + A++E +Q G VR+P+ LR ++ + V
Sbjct: 389 GRTLVAVMENYQDAEGRVRVPEALRPYMGGIEV 421
>gi|330823695|ref|YP_004386998.1| seryl-tRNA synthetase [Alicycliphilus denitrificans K601]
gi|329309067|gb|AEB83482.1| Seryl-tRNA synthetase [Alicycliphilus denitrificans K601]
Length = 438
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 156/332 (46%), Gaps = 63/332 (18%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGR 137
N H SVPV ++E N VR G + +S HVDL + G+D + GA ++G R
Sbjct: 110 NLPHESVPVGSDEAGNVEVRRWGTP---RDFSFAVKDHVDLGAPL-GLDFDMGAKLSGSR 165
Query: 138 GYFLKGPAVCLQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVI 196
+KGP L L Q+ L + E GYT Y P+ + + ++ QL +F+ +L+
Sbjct: 166 FTVMKGPIARLHRALAQFMLDVQTGEHGYTECYVPYIVNADSLRGTGQLPKFEGDLFAA- 224
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ---- 252
KG + G+ P+ +L YLI TSE P+ + RD L E+ LPIR S CFR
Sbjct: 225 KKGGQEGEPVPDDAQL---YLIPTSEVPLTNIVRDEVLAESDLPIRLTAHSPCFRSEAGS 281
Query: 253 --------------------------------EDLTK---------SIAYRVVNIVSGAL 271
E++T+ + YRVV++ +G +
Sbjct: 282 YGRDTRGMIRQHQFDKIEMVQIVHPDKSYEALEEMTRHAEAILQKLGLPYRVVSLCTGDM 341
Query: 272 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
+AK DLE W P G +RE+ S SNC +Q+RR+ R+ + N E VH LN +
Sbjct: 342 GFGSAKTYDLEVWLPAQGTYREISSVSNCEAFQARRMQARFKNAQGRN---ELVHTLNGS 398
Query: 332 ACATTRVICAILET-HQTETGVRIPDCLRKFV 362
A R + A+LE Q + + IP+ LR ++
Sbjct: 399 GLAVGRTLVAVLENCQQADGSIAIPEVLRPYM 430
>gi|125555413|gb|EAZ01019.1| hypothetical protein OsI_23053 [Oryza sativa Indica Group]
Length = 409
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 168/354 (47%), Gaps = 80/354 (22%)
Query: 76 DSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAI 132
++ ++P N HP PV +E+ +VR + ++ ++ H+ L +D D +A A
Sbjct: 68 EAQSIP-NTTHPDAPVGG--EESSVVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAE 124
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEE 191
V+G + Y+LK AV L++ LV +A+++ +KG+TPL TP +R V+++ Q + +
Sbjct: 125 VSGSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQ 184
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
+Y + + D+ LI T+E P+ +H DS LP++ LP +Y+ S CFR
Sbjct: 185 VYSI---------------DNSDQCLIGTAEIPVGGIHMDSILPDSDLPRKYVAYSHCFR 229
Query: 252 QEDL---------------------------------------------TKSIAYRVVNI 266
E + + ++ +++
Sbjct: 230 TEAGAAGAATRGLYRVHQFSKVEMFVFCRPEESDKCHEELITIEEELYASLGLHFKTLDM 289
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT----------- 315
+G L A +K D+EAW PG + E+ S SNC DYQSRRL +R+ +
Sbjct: 290 ATGDLGAPAYRKFDIEAWMPGLDRYGEISSASNCTDYQSRRLGIRFRPSPADPPPANAKK 349
Query: 316 -KKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
K + +FVH LNATA A R+I ILE Q E G V IP+ LR F+ + V
Sbjct: 350 GKGSSGPTQFVHTLNATAVAVPRLIICILENFQQEDGTVVIPEPLRPFMGGLEV 403
>gi|399046000|ref|ZP_10738537.1| seryl-tRNA synthetase [Brevibacillus sp. CF112]
gi|433545751|ref|ZP_20502098.1| seryl-tRNA synthetase [Brevibacillus agri BAB-2500]
gi|398055785|gb|EJL47835.1| seryl-tRNA synthetase [Brevibacillus sp. CF112]
gi|432182954|gb|ELK40508.1| seryl-tRNA synthetase [Brevibacillus agri BAB-2500]
Length = 426
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 187/442 (42%), Gaps = 100/442 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ + R D E+V++ R +++ +D+ E D K RQ +A+ +N S
Sbjct: 1 MLDVKVLRQ----DLEEVKRRLAHRNEDISALDQFAEVDEKRRQVIQEAEALKNKRNTVS 56
Query: 62 K--------------VIGEKMKAKEPVGDSS---------------TLPGNHLHPSVPVS 92
+ +I E + E + +LP N H S P+
Sbjct: 57 EQVAVMKRNKENADHLIAEMKEVNERIKKLDEELRKLDEQLEFILLSLP-NLPHESTPIG 115
Query: 93 NNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
+ED+N + T G+ + H +L + +D E A V G R F KG L+
Sbjct: 116 TSEDDNVVAWTWGEPRSFGFETKPHWELASQAGILDFETAAKVTGSRFVFYKGLGARLER 175
Query: 151 GLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
L+ + + E GY + P+ + + M QL +F+E+ +K+ G
Sbjct: 176 ALMNFMMDLHATEHGYEEVIPPYIVNRASMTGTGQLPKFEEDAFKLEGP----------- 224
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------- 253
D +LI T+E P+ +HRD + A LP Y S CFR E
Sbjct: 225 ----DYFLIPTAEVPVTNMHRDEIMDGADLPRYYAAFSACFRSEAGSAGRDTRGLIRQHQ 280
Query: 254 ----DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
+L K + YRV+++ +G L AAKK DLE W
Sbjct: 281 FNKVELVKFVKPEDSYDELDKLVKNAEKVLQLLGLPYRVMSMCTGDLGFTAAKKFDLEVW 340
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 344
P S +RE+ SCSN D+Q+RR +R+ + K K EFVH LN + A R + AILE
Sbjct: 341 IPSSNTYREISSCSNFEDFQARRANIRFRRDTK--SKPEFVHTLNGSGLAIGRTVAAILE 398
Query: 345 THQTETG-VRIPDCLRKFVPAV 365
+Q G + IP+ LR ++ V
Sbjct: 399 NYQEADGSITIPEVLRPYMGGV 420
>gi|291457255|ref|ZP_06596645.1| serine--tRNA ligase [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|417942921|ref|ZP_12586180.1| Seryl-tRNA synthetase (Serine--tRNA ligase) [Bifidobacterium breve
CECT 7263]
gi|291381090|gb|EFE88608.1| serine--tRNA ligase [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|376166337|gb|EHS85249.1| Seryl-tRNA synthetase (Serine--tRNA ligase) [Bifidobacterium breve
CECT 7263]
Length = 452
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 192/440 (43%), Gaps = 102/440 (23%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQ--------------- 45
++LD+ R + V+++Q+ R ++VELVD+V+ +D R+
Sbjct: 24 LMLDIQFIREH----TDIVKESQRKRGESVELVDEVLSSDTVRRESLKAFEEARAQQKEI 79
Query: 46 --------FRHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNN 94
KA + K L KV K KA + +T N + P P
Sbjct: 80 GKKVASAPADEKAKLIAETKELSQKVAEFKSKADAAAEEYTTAMWKLSNIVEPEAP-EGG 138
Query: 95 EDENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQ 149
ED+ +V+ G E + H+ L T + G+D G V G R YFL+G +Q
Sbjct: 139 EDDYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQ 198
Query: 150 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEK 209
+ ++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 199 IAMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL-------------- 244
Query: 210 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------ 251
E DD+YL+ TSE + +H + L + P+RY G S+C+R
Sbjct: 245 REPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQ 304
Query: 252 -----------QEDLTK----------------SIAYRVVNIVSGALNHAAAKKLDLEAW 284
QED K + YR+++ +G L +AA+K D EAW
Sbjct: 305 FDKVEMFVYAKQEDSYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAW 364
Query: 285 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAIL 343
P +REL S SNC +YQ+RRL +R ++M + V LN T ATTR + AI+
Sbjct: 365 VPTQNRYRELTSTSNCTEYQARRLNIR----ERMEDGGTRPVSTLNGT-LATTRWLVAIM 419
Query: 344 ETHQTETG-VRIPDCLRKFV 362
E HQ + G + IP +R ++
Sbjct: 420 ENHQQKDGSIEIPKAMRAYM 439
>gi|359403127|ref|ZP_09196034.1| seryl-tRNA synthetase [Spiroplasma melliferum KC3]
gi|357968344|gb|EHJ90853.1| seryl-tRNA synthetase [Spiroplasma melliferum KC3]
Length = 422
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 66/321 (20%)
Query: 88 SVPVSNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
SVP +E++N +R G +K H ++ T +D +D + G ++G R KG
Sbjct: 113 SVPSGEDENDNVEIRKWGKISNHQKVKEHWEVATKLDLIDFDRGTKISGSRFVVYKGMGA 172
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + L + ++GY + P ++ ++M L +F E+LY +
Sbjct: 173 KLERALMNFMLDEHAKRGYIEIEPPILVQPQIMYGTGNLPKFKEDLYYI----------- 221
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
EKD L YLI T+E P+ ++R+ L + LPI + + CFRQE
Sbjct: 222 -EKDNL---YLIPTAEVPVTNLYREEILEKDQLPIYHTAYTPCFRQEAGSAGRDTKGIIR 277
Query: 254 --------------------DLTK------------SIAYRVVNIVSGALNHAAAKKLDL 281
+L K I YRV+ + SG + ++ K D+
Sbjct: 278 LHQFKKVEMVKFTTEEASFEELEKMVLDAENILQLLEIPYRVILLCSGDMGFSSTKTYDV 337
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W PG +RE+ SCSNCLD+Q+RR+ +RY + + +I++VH LN + A R+I A
Sbjct: 338 EVWMPGQNKYREISSCSNCLDFQARRMKLRY----RDDNEIKYVHTLNGSGLAIDRLIAA 393
Query: 342 ILETHQTETG-VRIPDCLRKF 361
ILE +Q E G + IP L+ +
Sbjct: 394 ILENYQNEDGTITIPKKLQPY 414
>gi|350545344|ref|ZP_08914834.1| Seryl-tRNA synthetase [Candidatus Burkholderia kirkii UZHbot1]
gi|350526892|emb|CCD39365.1| Seryl-tRNA synthetase [Candidatus Burkholderia kirkii UZHbot1]
Length = 432
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 157/336 (46%), Gaps = 69/336 (20%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIV 133
T+P N H SVPV ++E +N VR G D E+R HVD+ + G+D E GA +
Sbjct: 102 TVP-NLPHGSVPVGDDETQNVEVRRWGKPREFDFEIR---DHVDVGAPL-GLDFETGAKL 156
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
+G R L+GP L L Q+ + E+ GYT YTP+ + E++ QL +F +++
Sbjct: 157 SGARFTLLRGPIARLHRALAQFMIDTHTEQHGYTEAYTPYIVNPEILYGTGQLPKFADDM 216
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
++V EK GD + +YLI+TSE + RDS L +LP++ S CFR
Sbjct: 217 FRV----EKGGD-----ENKVTQYLISTSEISLTNTARDSILEANALPLKLTTHSPCFRS 267
Query: 253 ED--------------------------------------------LTK-SIAYRVVNIV 267
E L K + YRV+ +
Sbjct: 268 EAGSYGRDTRGLIRQHQFDKVEMVQIVSPEHSYAALDEMVGQAETILQKLELPYRVITLC 327
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G + +AAK DLE W P +RE+ SCSN +Q+RR+ R+ + K EFVH
Sbjct: 328 TGDMGFSAAKTFDLEVWLPAQNTYREISSCSNTEAFQARRIQARF---RNAQGKPEFVHT 384
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R + A+LE Q G V IP LR ++
Sbjct: 385 LNGSGLAVGRTLVAVLENFQNADGSVTIPAALRPYM 420
>gi|326802688|ref|YP_004320506.1| serine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
gi|326651068|gb|AEA01251.1| serine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
Length = 432
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 184/429 (42%), Gaps = 100/429 (23%)
Query: 17 EKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPVGD 76
++V + K R E ++ + + D K RQ +A+N K +N+ S IG+ + KE D
Sbjct: 12 DQVAEALKGRGVEKETLEHLRDLDQKRRQVIVEAENLKKERNIASDAIGQLKRNKENADD 71
Query: 77 S-----------------------------STLPGNHLHPSVPVSNNEDENGIVRTKGDT 107
+ +P N VPV +EDEN + G+T
Sbjct: 72 KIQEMKALGTKIKALDSDLDQLDQEEHDILARIP-NLPAEGVPVGADEDENVEIHRHGET 130
Query: 108 -----EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIE 162
E++ +H DL +D +D +AGA V+G R + KG L+ L + L + +
Sbjct: 131 PEFNFELK---AHWDLAEDLDILDWDAGAKVSGSRFVYYKGLGARLERALYNFMLDQHQK 187
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSE 222
+GY + TPF + + M Q +F E++Y++ +G+ D LI T+E
Sbjct: 188 EGYMEMITPFLVNDQAMYGTGQFPKFTEDVYQITNEGQ-------------DLTLIPTAE 234
Query: 223 QPICAVHRDSWLPEASLPIRYLGVSTCFRQ------------------------------ 252
P+ L E LPIR +S CFR
Sbjct: 235 VPLTNYFAKEILKEEDLPIRVTALSPCFRSEAGSAGRDTRGLIRMHQFQKVEMVKVATPD 294
Query: 253 ------EDLTKS---------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSC 297
E +TK+ + YR + + +G + +AAK D+E W P +RE+ SC
Sbjct: 295 QSFDELEAMTKNAENILDLLGLPYRRIILCTGDMGFSAAKTYDIEVWMPAQNTYREISSC 354
Query: 298 SNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPD 356
SNC+D+Q+RR VRY + ++ K + H LN + A R + A+LE Q G + IP+
Sbjct: 355 SNCVDFQARRAQVRY---RDIDGKTQLAHTLNGSGLAVGRTVAAVLENGQNADGSITIPE 411
Query: 357 CLRKFVPAV 365
L ++ V
Sbjct: 412 VLVPYMGGV 420
>gi|20806566|ref|NP_621737.1| seryl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|254478338|ref|ZP_05091717.1| seryl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
gi|30173181|sp|Q8RDJ5.1|SYS_THETN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|20515006|gb|AAM23341.1| Seryl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|214035696|gb|EEB76391.1| seryl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
Length = 425
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 157/336 (46%), Gaps = 73/336 (21%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIV 133
T+P N H SVP+ ++++N VR G+ +K+ H ++ + +D EA + V
Sbjct: 102 TIP-NIPHESVPIGESDEDNVEVRRWGEP---RKFDFEPKPHWEIGEALGILDFEAASRV 157
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
G R F KG L+ L+ + L IEK GY ++ PF + + M QL +F+E+
Sbjct: 158 TGSRFVFYKGLGARLERALINFMLDLHIEKHGYKEVFPPFLVHRRSMFGTGQLPKFEEDA 217
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 252
+KV G D +LI T+E P+ ++R++ + LPI + S CFRQ
Sbjct: 218 FKVEGT---------------DYFLIPTAEVPVTNLYRETIIDGEQLPIYHCAYSACFRQ 262
Query: 253 E--------------------DLTK-------------------------SIAYRVVNIV 267
E +L K + YRVV I
Sbjct: 263 EAGAAGRDTRGLIRQHQFDKVELVKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVAIC 322
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHM 327
+G L A+KK D+E W P G + E+ SCSNC D+Q+RR +RY K K+++VH
Sbjct: 323 TGDLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDFQARRANIRY--RPKGGGKLQYVHT 380
Query: 328 LNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
LN + A R AILE +Q E G V +P+ LR ++
Sbjct: 381 LNGSGVAVGRTFAAILENYQQEDGSVVVPEVLRPYM 416
>gi|438118363|ref|ZP_20871340.1| seryl-tRNA synthetase [Spiroplasma melliferum IPMB4A]
gi|434155790|gb|ELL44708.1| seryl-tRNA synthetase [Spiroplasma melliferum IPMB4A]
Length = 422
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 66/321 (20%)
Query: 88 SVPVSNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
SVP +E++N +R G +K H ++ T +D +D + G ++G R KG
Sbjct: 113 SVPSGEDENDNVEIRKWGKISNHQKVKEHWEVATKLDLIDFDRGTKISGSRFVVYKGMGA 172
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + L + ++GY + P ++ ++M L +F E+LY +
Sbjct: 173 KLERALMNFMLDEHAKRGYIEIEPPILVQPQIMYGTGNLPKFKEDLYYI----------- 221
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
EKD L YLI T+E P+ ++R+ L + LPI + + CFRQE
Sbjct: 222 -EKDNL---YLIPTAEVPVTNLYREEILEKDQLPIYHTAYTPCFRQEAGSAGRDTKGIIR 277
Query: 254 --------------------DLTK------------SIAYRVVNIVSGALNHAAAKKLDL 281
+L K I YRV+ + SG + ++ K D+
Sbjct: 278 LHQFNKVEMVKFTTEEASFEELEKMVLDAENILQLLEIPYRVILLCSGDMGFSSTKTYDV 337
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W PG +RE+ SCSNCLD+Q+RR+ +RY + + +I++VH LN + A R+I A
Sbjct: 338 EVWMPGQNKYREISSCSNCLDFQARRMKLRY----RDDNEIKYVHTLNGSGLAIDRLIAA 393
Query: 342 ILETHQTETG-VRIPDCLRKF 361
ILE +Q E G + IP L+ +
Sbjct: 394 ILENYQNEDGTITIPKKLQPY 414
>gi|108864577|gb|ABA94785.2| seryl-tRNA synthetase family protein, expressed [Oryza sativa
Japonica Group]
Length = 382
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 168/354 (47%), Gaps = 80/354 (22%)
Query: 76 DSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAI 132
++ ++P N HP PV +E+ +VR + ++ ++ H+ L +D D +A A
Sbjct: 41 EAQSIP-NTTHPDAPVGG--EESSVVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAE 97
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEE 191
V+G + Y+LK AV L++ LV +A+++ +KG+TPL TP +R V+++ Q + +
Sbjct: 98 VSGSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQ 157
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
+Y + + D+ LI T+E P+ +H DS LP++ LP +Y+ S CFR
Sbjct: 158 VYSI---------------DNSDQCLIGTAEIPVGGIHMDSILPDSDLPRKYVAYSHCFR 202
Query: 252 QEDL---------------------------------------------TKSIAYRVVNI 266
E + + ++ +++
Sbjct: 203 TEAGAAGAATRGLYRVHQFSKVEMFVFCRPEESDKCHEELITIEEELYASLGLHFKTLDM 262
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT----------- 315
+G L A +K D+EAW PG + E+ S SNC DYQSRRL +R+ +
Sbjct: 263 ATGDLGAPAYRKFDIEAWMPGLDRYGEISSASNCTDYQSRRLGIRFRPSPADPPPANAKK 322
Query: 316 -KKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
K + +FVH LNATA A R+I ILE Q E G V IP+ LR F+ + V
Sbjct: 323 GKGSSGPTQFVHTLNATAVAVPRLIICILENFQQEDGTVVIPEPLRPFMGGLEV 376
>gi|448320513|ref|ZP_21510000.1| seryl-tRNA ligase [Natronococcus amylolyticus DSM 10524]
gi|445605978|gb|ELY59893.1| seryl-tRNA ligase [Natronococcus amylolyticus DSM 10524]
Length = 459
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 205/460 (44%), Gaps = 103/460 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++D L R DPE VR+ +R +V+L D++IE D +WR+ + + D +N +
Sbjct: 1 MIDRSLLRE----DPEAVREALDNRGADVDL-DELIEIDERWRELKARGDELRHERNQVT 55
Query: 62 KVIG------------------EKMKAK-EPVGDSSTLPGNHLHP-----------SVPV 91
+ IG +++KA+ E V +T G+ L SVP+
Sbjct: 56 ERIGALVAKGKQDEKDEAIEESKELKAEIEDVEAEATELGDELRERMLEVPQIPDESVPL 115
Query: 92 SNNEDENGIVRTKGDTEVRKKYS----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+E N R G ++R H +L +D +D E GA G YFLKG
Sbjct: 116 GLDERHNVEDRRWGFDDLRVDADAITPHYELGEELDIIDEERGAKTTGSGFYFLKGDGAR 175
Query: 148 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAP 207
L+ L+Q+ + E+GY L+ P ++ E M+ QL +F ++ Y++ G E
Sbjct: 176 LEHALIQFMMDVHREQGYVDLFPPVPVKSESMRGTGQLPKFADDAYRLGGSNE------- 228
Query: 208 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-------------- 253
++ E DD +L T+E P+ ++ D L LP+++ + FR+E
Sbjct: 229 DEYEDDDLWLCPTAEVPVTNMYADEILLTDDLPLKHQAYTPNFRREAGEHGTETRGIVRV 288
Query: 254 ------------------DLTKS-------------IAYRVVNIVSGALNHAAAKKLDLE 282
D +S + YR++ + +G L A+AK D+E
Sbjct: 289 HQFNKVELVNFVEPEDSYDRLESLLDEAEEVLRQLELPYRILELCTGDLTFASAKTYDIE 348
Query: 283 AWFPGS---------GAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 333
W PG G + E+ S SN D+Q+RR +RY + +E E++H LNA+
Sbjct: 349 VWAPGDDMDDGPEEGGRWLEVSSASNFEDFQARRAGLRY--RPERHESAEYLHTLNASGL 406
Query: 334 ATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGE 372
A RV+ AILE HQ E G V IP+ L+ ++ V E E
Sbjct: 407 ALPRVMVAILEYHQNEDGTVTIPEALQPYMGGQEVIEGHE 446
>gi|433650764|ref|YP_007295766.1| seryl-tRNA synthetase [Mycobacterium smegmatis JS623]
gi|433300541|gb|AGB26361.1| seryl-tRNA synthetase [Mycobacterium smegmatis JS623]
Length = 419
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 189/435 (43%), Gaps = 95/435 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR +Q+ R ++ LVD + E D R ADN + S
Sbjct: 1 MIDLKLLRE----NPDLVRASQRARGEDPTLVDALREADSARRSAVSTADNMRAEQKSLS 56
Query: 62 KVIG------------------EKMKAKEPVGDSSTLPGNHLHPSVP-------VSNNED 96
K +G EK+K E ++ H ++P + ED
Sbjct: 57 KRVGKASPDERPALLEQAKTFAEKVKVAEAEQAAAENAFTAAHMAIPNVIINGVPAGGED 116
Query: 97 ENGIVRTKGDT-EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
+ ++ T G + H++L + +D E GA V+G R YFL G LQ+GL+Q
Sbjct: 117 DFAVLDTVGKPPAIEAPKDHLELGESLGLIDMERGAKVSGSRFYFLTGAGALLQLGLLQL 176
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
A+ G+T + P +R EVM L +E+Y+V E DD
Sbjct: 177 AVRLATANGFTLVIPPVLVRPEVMAGTGFLGAHADEVYRV---------------EADDL 221
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------------- 258
YL+ TSE P+ H + L + P+RY G S+CFR+E +
Sbjct: 222 YLVGTSEVPLAGYHANEILDLSDGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEG 281
Query: 259 ----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
+ YRV+++ +G L +AA+K D EAW P G
Sbjct: 282 FVYCKPEDAEAEHDRLLGWQRQMLAQIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQGT 341
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL VRY + N K + LN T TTR + AILE HQ
Sbjct: 342 YRELTSTSNCTTFQARRLSVRY---RDENGKPQTAATLNGT-LGTTRWLVAILENHQQPD 397
Query: 351 G-VRIPDCLRKFVPA 364
G VRIP+ L +V A
Sbjct: 398 GSVRIPEALVPYVGA 412
>gi|448431521|ref|ZP_21585110.1| seryl-tRNA ligase [Halorubrum tebenquichense DSM 14210]
gi|445687594|gb|ELZ39873.1| seryl-tRNA ligase [Halorubrum tebenquichense DSM 14210]
Length = 456
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 192/445 (43%), Gaps = 99/445 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGE-KMKAKEP 73
+PE VR+ ++ +V+L D++++ D +WR+ + + D+ +N S IGE K +E
Sbjct: 10 NPEVVREALDNKGVDVDL-DRILDVDEEWRELKQRGDDLRHERNEVSSKIGELKQSGEEE 68
Query: 74 VGDSSTLPGNHL-----------------------------HPSVPVSNNEDENGIVRTK 104
+ L SVPV +E EN R +
Sbjct: 69 AAQEAIERSQELKSELQEIEERAETLETELEESLLELPQVPQESVPVGEDESENVERRRE 128
Query: 105 GDTEVRKK----YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW 160
G ++R H DL ++ +D E GA VAGG Y KG L+ L+Q+ L
Sbjct: 129 GFDDLRDLPDDVTPHYDLGEELEILDFERGAKVAGGGFYVAKGDGARLEHALIQFMLDVH 188
Query: 161 IEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIAT 220
E+GY ++ P + M+ QL +F E+ Y+V G E+ D DD +L+ T
Sbjct: 189 REQGYEDVFPPIPVNSASMRGTGQLPKFTEDAYRVEGSNEEAYDD-------DDLWLLPT 241
Query: 221 SEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----DLTKSIA--------------- 260
+E P+ +HRD L LP++Y + FRQE T+ I
Sbjct: 242 AEVPVTNLHRDEILLGEDLPLKYQAYTPNFRQEAGEHGTETRGIVRVHQFNKVEMVNFVR 301
Query: 261 -------------------------YRVVNIVSGALNHAAAKKLDLEAWFPG-------- 287
YR++ + +G L AKK D+E W PG
Sbjct: 302 PEESDERFEGLVDEAEEVLRRLELPYRILEMCTGDLGFTQAKKYDVEVWAPGDDMDEGPE 361
Query: 288 -SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G + E+ S SN D+Q+RR ++Y ++ +E E++H LN + A R++ A+LE +
Sbjct: 362 QGGRWLEVSSVSNFEDFQARRAGIQY--REEHHESAEYLHTLNGSGLAVPRIVVAVLEYY 419
Query: 347 QTETG-VRIPDCLRKFVPAVYVNEA 370
Q + G V +P+ LR ++ V E
Sbjct: 420 QNDDGTVTVPEALRPYMGGTEVIEG 444
>gi|115486243|ref|NP_001068265.1| Os11g0610900 [Oryza sativa Japonica Group]
gi|108864576|gb|ABA94784.2| seryl-tRNA synthetase family protein, expressed [Oryza sativa
Japonica Group]
gi|113645487|dbj|BAF28628.1| Os11g0610900 [Oryza sativa Japonica Group]
Length = 509
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 168/354 (47%), Gaps = 80/354 (22%)
Query: 76 DSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAI 132
++ ++P N HP PV +E+ +VR + ++ ++ H+ L +D D +A A
Sbjct: 168 EAQSIP-NTTHPDAPVGG--EESSVVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAE 224
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEE 191
V+G + Y+LK AV L++ LV +A+++ +KG+TPL TP +R V+++ Q + +
Sbjct: 225 VSGSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQ 284
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
+Y + + D+ LI T+E P+ +H DS LP++ LP +Y+ S CFR
Sbjct: 285 VYSI---------------DNSDQCLIGTAEIPVGGIHMDSILPDSDLPRKYVAYSHCFR 329
Query: 252 QEDL---------------------------------------------TKSIAYRVVNI 266
E + + ++ +++
Sbjct: 330 TEAGAAGAATRGLYRVHQFSKVEMFVFCRPEESDKCHEELITIEEELYASLGLHFKTLDM 389
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT----------- 315
+G L A +K D+EAW PG + E+ S SNC DYQSRRL +R+ +
Sbjct: 390 ATGDLGAPAYRKFDIEAWMPGLDRYGEISSASNCTDYQSRRLGIRFRPSPADPPPANAKK 449
Query: 316 -KKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
K + +FVH LNATA A R+I ILE Q E G V IP+ LR F+ + V
Sbjct: 450 GKGSSGPTQFVHTLNATAVAVPRLIICILENFQQEDGTVVIPEPLRPFMGGLEV 503
>gi|3355717|emb|CAA73496.1| seryl-tRNA synthetase [Zea mays]
Length = 489
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 167/349 (47%), Gaps = 80/349 (22%)
Query: 76 DSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAI 132
++ ++P N HP VPV +E+ ++R + ++ ++ H+ L +D D +A A
Sbjct: 148 EAQSIP-NTTHPDVPVGG--EESSVLRKEVGSQRSFNFAIKDHLQLGKELDLFDFDAAAE 204
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
V+G + Y+LK AV L++ LV +A+S+ +KG+TPL TP +R V+++ + ++
Sbjct: 205 VSGSKFYYLKNEAVLLEMALVIWAISEVSKKGFTPLITPEIVRSSVVEKCGFSKGKNTQV 264
Query: 193 YKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR- 251
Y + E D+ LI T+E P+ +H DS L E++LP++Y+ S CFR
Sbjct: 265 YSI---------------EDSDQCLIGTAEIPVGGIHMDSILAESALPLKYVAYSHCFRT 309
Query: 252 ------------------------------------------QEDLTKSIA--YRVVNIV 267
+EDL S+ ++ +++
Sbjct: 310 EAGAAGAATRGLYRVHQFSKVEMFIFCRPEESGKWHEELITIEEDLYASLGLHFKTLDMA 369
Query: 268 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEK------ 321
+G L A +K D+EAW PG + E+ S SNC DYQSRRL +RY +
Sbjct: 370 TGDLGAPAYRKFDIEAWMPGLERYGEISSASNCTDYQSRRLGIRYRPSPSEPPSTSTKKG 429
Query: 322 -------IEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+FVH LNATA A R+I ILE Q G + +P+ LR ++
Sbjct: 430 KGAASGPTQFVHTLNATAVAVPRLIVCILENFQQGDGSIVVPEPLRPYM 478
>gi|384197680|ref|YP_005583424.1| serine--tRNA ligase [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333109411|gb|AEF26427.1| serine--tRNA ligase [Bifidobacterium breve ACS-071-V-Sch8b]
gi|339479793|gb|ABE96260.1| Seryl-tRNA synthetase [Bifidobacterium breve UCC2003]
Length = 428
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 191/439 (43%), Gaps = 102/439 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQ---------------- 45
+LD+ R + V+++Q+ R ++VELVD+V+ +D R+
Sbjct: 1 MLDIQFIREH----TDIVKESQRKRGESVELVDEVLSSDTVRRESLKAFEEARAQQKEIG 56
Query: 46 -------FRHKADNFNKFKNLCSKVIGEKMKAKEPVGDSSTLP---GNHLHPSVPVSNNE 95
KA + K L KV K KA + +T N + P P E
Sbjct: 57 KKVASAPADEKAKLIAETKELSQKVAEFKSKADAAAEEYTTAMWKLSNIVEPEAP-EGGE 115
Query: 96 DENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQV 150
D+ +V+ G E + H+ L T + G+D G V G R YFL+G +Q+
Sbjct: 116 DDYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQI 175
Query: 151 GLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ A+ + E G+T TP +R EVM+ L +E+Y++
Sbjct: 176 AMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRL--------------R 221
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR------------------- 251
E DD+YL+ TSE + +H + L + P+RY G S+C+R
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 252 ----------QEDLTK----------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
QED K + YR+++ +G L +AA+K D EAW
Sbjct: 282 DKVEMFVYAKQEDSYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWV 341
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE-KIEFVHMLNATACATTRVICAILE 344
P +REL S SNC +YQ+RRL +R ++M + V LN T ATTR + AI+E
Sbjct: 342 PTQNRYRELTSTSNCTEYQARRLNIR----ERMEDGGTRPVSTLNGT-LATTRWLVAIME 396
Query: 345 THQTETG-VRIPDCLRKFV 362
HQ + G + IP +R ++
Sbjct: 397 NHQQKDGSIEIPKAMRAYM 415
>gi|206561375|ref|YP_002232140.1| seryl-tRNA synthetase [Burkholderia cenocepacia J2315]
gi|421867292|ref|ZP_16298951.1| Seryl-tRNA synthetase [Burkholderia cenocepacia H111]
gi|444361950|ref|ZP_21162523.1| serine--tRNA ligase [Burkholderia cenocepacia BC7]
gi|444373866|ref|ZP_21173179.1| serine--tRNA ligase [Burkholderia cenocepacia K56-2Valvano]
gi|238693102|sp|B4EBR4.1|SYS_BURCJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|198037417|emb|CAR53352.1| seryl-tRNA synthetase [Burkholderia cenocepacia J2315]
gi|358072706|emb|CCE49829.1| Seryl-tRNA synthetase [Burkholderia cenocepacia H111]
gi|443591026|gb|ELT59958.1| serine--tRNA ligase [Burkholderia cenocepacia K56-2Valvano]
gi|443597821|gb|ELT66230.1| serine--tRNA ligase [Burkholderia cenocepacia BC7]
Length = 433
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 170/359 (47%), Gaps = 76/359 (21%)
Query: 64 IGEKMKAKEP-VGD-----SSTLPG--NHLHPSVPVSNNEDENGIVRTKG-----DTEVR 110
IG+ MKA E +G+ S + G N H SVPV +E +N VR G D EV+
Sbjct: 78 IGDDMKASEAKLGEIQARLSDLMLGMPNVAHESVPVGKDEADNVEVRRWGTPRQFDFEVK 137
Query: 111 KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLY 169
HVD+ T + G+D E GA +AG R L+GP L L Q+ + ++ GYT Y
Sbjct: 138 ---DHVDVGTPL-GLDFETGAKLAGARFTMLRGPIARLHRALAQFMIDTHTQQHGYTETY 193
Query: 170 TPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVH 229
TP+ + E++ QL +F +++++V EK G + +YLI+TSE +
Sbjct: 194 TPYIVNPEILYGTGQLPKFADDMFRV----EKGG-----AENTVTQYLISTSEISLTNTV 244
Query: 230 RDSWLPEASLPIRYLGVSTCFRQE--------------------DLTKSIA--------- 260
R+S + A+LPI+ S CFR E ++ + +A
Sbjct: 245 RESIVDGAALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPETSYAALD 304
Query: 261 ----------------YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQ 304
YRV+ + +G + +AAK DLE W P +RE+ SCSN +Q
Sbjct: 305 EMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSCSNTEAFQ 364
Query: 305 SRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+RR+ R+ + K E VH LN + A R + A+LE +Q G V +P+ LR ++
Sbjct: 365 ARRMQARF---RNAQGKPELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVLRPYM 420
>gi|419718057|ref|ZP_14245396.1| serine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
gi|383305777|gb|EIC97123.1| serine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
Length = 427
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 192/445 (43%), Gaps = 110/445 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKN--VELVDKVIENDLKWRQFRHKADNFNKFKNL 59
++D+ R +P+ VR+N K++F++ + LVD+VIE D K R+ + +AD +N
Sbjct: 1 MIDIKFLRE----NPDAVRQNIKNKFQDFKLPLVDEVIELDEKLRKTKVEADELRAKRNK 56
Query: 60 CSKVIG-----------EKMKAK-----------EPV---------GDSSTLPGNHLHPS 88
SK IG E++KA EP+ D T+P N + PS
Sbjct: 57 ISKEIGTLMAQGKKEEAEQVKASVASLGEQLAKLEPIEAELEEKIKKDMMTIP-NIIDPS 115
Query: 89 VPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKG 143
VP+ ++ EN + G D E+ H +++ ++G+D ++ VAG Y+L G
Sbjct: 116 VPIGKDDSENVEIEKFGEPFIPDFEIP---YHTEIMEKLNGIDLDSARKVAGNGFYYLMG 172
Query: 144 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
L ++ YA I++G+T PF +R EV+ V A+ D +YK+ G
Sbjct: 173 DIARLHSAVISYARDFMIDRGFTYCVPPFMIRSEVVTGVMSFAEMDAMMYKIEG------ 226
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------- 253
+D YLI TSE + D+ EA LP S CFR+E
Sbjct: 227 ---------EDLYLIGTSEHSMIGKFIDTMNEEAKLPYTLTSYSPCFRKEKGAHGIEERG 277
Query: 254 ---------------------------------DLTKS--IAYRVVNIVSGALNHAAAKK 278
DL +S I R + SG L K
Sbjct: 278 IYRIHQFEKQEMIVVCKPEESKMWYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKS 337
Query: 279 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRV 338
D+EAW P + E+ SCSN D Q+RRL +R K N F H LN T A R+
Sbjct: 338 CDVEAWSPRQKKYFEVGSCSNLGDAQARRLRIR---VKDENGNKYFAHTLNNTVVAPPRM 394
Query: 339 ICAILETHQTETG-VRIPDCLRKFV 362
+ A LE + E G +RIP+ LR ++
Sbjct: 395 LIAFLENNLNEDGSIRIPEVLRPYM 419
>gi|323141849|ref|ZP_08076713.1| serine--tRNA ligase [Phascolarctobacterium succinatutens YIT 12067]
gi|322413689|gb|EFY04544.1| serine--tRNA ligase [Phascolarctobacterium succinatutens YIT 12067]
Length = 426
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 189/442 (42%), Gaps = 107/442 (24%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL R +P+ V + K R +++L + +E D + R+ + + K +N S
Sbjct: 1 MLDLKFVRE----NPKLVEEAVKSRNGSLDLTE-FLELDKQRREITQQVEALKKERNTAS 55
Query: 62 KVIG----------EKMKAKEPVGDSS-------------------TLPGNHLHPSVPVS 92
+ IG E+M A +GD T+P N VPV
Sbjct: 56 QEIGKLKKAGQDAAEQMAAVRALGDKIAADDKELKEIEEKIKSILLTIP-NVPAEDVPVG 114
Query: 93 NNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
++ N ++RT G D E + +H D+ + +D E G V+G R F +G
Sbjct: 115 KDDTCNPVIRTWGEPTKFDFEPK---AHWDIGENLGILDFERGVKVSGARYVFYRGMGSR 171
Query: 148 LQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ ++ + L K GYT + PF + MQ QL +F E++YK+
Sbjct: 172 LERAVINFFLDVHTRKHGYTEFFPPFIVNGASMQGTGQLPKFAEDMYKL----------- 220
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
E D YLI T+E P+ HRD L LP++Y S CFR E
Sbjct: 221 ----ENGDMYLIPTAEVPVTNYHRDDILTGDELPLKYTAYSACFRAEAGAAGRDTRGLIR 276
Query: 254 -------DLTK-------------------------SIAYRVVNIVSGALNHAAAKKLDL 281
+L K + Y VV + +G L ++A DL
Sbjct: 277 MHQFNKVELVKFTKPEESWAELDKLTNDAEEVLQLLGLPYHVVRLCTGDLGFSSATTYDL 336
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W P + +RE+ SCSN LD+Q+RR +R+ + K K EFVH LN + A R + A
Sbjct: 337 EVWLPAANCYREISSCSNFLDFQARRANIRFRRDAK--SKPEFVHTLNGSGVAVGRTVAA 394
Query: 342 ILETHQTETG-VRIPDCLRKFV 362
ILE +Q G V +P+ LR ++
Sbjct: 395 ILENYQQADGSVVVPEVLRPYM 416
>gi|237742877|ref|ZP_04573358.1| seryl-tRNA synthetase [Fusobacterium sp. 4_1_13]
gi|229430525|gb|EEO40737.1| seryl-tRNA synthetase [Fusobacterium sp. 4_1_13]
Length = 424
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 190/447 (42%), Gaps = 108/447 (24%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
++L+L R + E +++ K+R NV++ D +E D K R+ + +N + +N
Sbjct: 3 IMLELKFMRE----NVEMLKEMLKNRNSNVDM-DTFVELDSKRREILSEVENLKRERNNV 57
Query: 61 SKVIGEKMKAK----------------------------EPVGDSSTLPGNHLHPSVPVS 92
S I K K E + D N H S P+
Sbjct: 58 SAEIANLKKEKKDANHLIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHSSTPIG 117
Query: 93 NNEDENGIVRTKGDTEVRKKY-----SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVC 147
+ED N +R G V KK+ SH D+ + +D E GA ++G R +G A
Sbjct: 118 PDEDYNLEIRKWG---VPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAAR 174
Query: 148 LQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + L +E+ YT TPF ++ EV + QL +F+E++YK
Sbjct: 175 LERALINFMLDVHTLEEDYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTT---------- 224
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
DD YLI+TSE + +HR L ++ LP Y S CFR+E
Sbjct: 225 ------DDMYLISTSEITMTNIHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIR 278
Query: 254 --------------------DLTK------------SIAYRVVNIVSGALNHAAAKKLDL 281
+L K + YRV+ + SG L +AAK DL
Sbjct: 279 LHQFNKVEMVKITDAESSYDELEKMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDL 338
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W P +RE+ SCSNC +Q+RR+ ++Y ++ EF H LN + A R + A
Sbjct: 339 EVWLPSQNKYREISSCSNCEAFQARRMGLKY----RVPNGSEFCHTLNGSGLAVGRTLVA 394
Query: 342 ILETHQTETG-VRIPDCLRKFVPAVYV 367
I+E +Q E G IP L ++ V V
Sbjct: 395 IMENYQQEDGSFLIPKVLIPYMGGVDV 421
>gi|385328954|ref|YP_005883257.1| seryl-tRNA synthetase [Neisseria meningitidis alpha710]
gi|421555374|ref|ZP_16001307.1| serine--tRNA ligase [Neisseria meningitidis 98008]
gi|421559682|ref|ZP_16005551.1| serine--tRNA ligase [Neisseria meningitidis 92045]
gi|308389806|gb|ADO32126.1| seryl-tRNA synthetase [Neisseria meningitidis alpha710]
gi|402330234|gb|EJU65582.1| serine--tRNA ligase [Neisseria meningitidis 98008]
gi|402334681|gb|EJU69960.1| serine--tRNA ligase [Neisseria meningitidis 92045]
Length = 431
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 86 HPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
H SVP +E EN VR G D E++ HVDL + G+D E GA ++G R
Sbjct: 110 HESVPAGKDETENVEVRKVGTPREFDFEIK---DHVDLGEPL-GLDFEGGAKLSGARFTV 165
Query: 141 LKGPAVCLQVGLVQYAL-SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
++G L L Q+ L + ++ GYT YTP+ + +Q QL +F E+L+ V G
Sbjct: 166 MRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGG 225
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
++ + +YLI T+E + DS +P LP++ S CFR E
Sbjct: 226 DETKTT---------QYLIPTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGK 276
Query: 254 -------------------------------------DLTKSI--AYRVVNIVSGALNHA 274
++ K++ YRV+ + +G +
Sbjct: 277 DTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMGFG 336
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAK DLE W P +RE+ SCSNC D+Q+RRL R+ K N K VH LN + A
Sbjct: 337 AAKTYDLEVWVPAQNTYREISSCSNCEDFQARRLKARF---KDENGKNRLVHTLNGSGLA 393
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
R + A+LE HQ G + IP L+ ++ V
Sbjct: 394 VGRTLVAVLENHQNADGSINIPAALQPYMGGV 425
>gi|110003912|emb|CAK98252.1| seryl-trna synthetase protein [Spiroplasma citri]
Length = 422
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 66/321 (20%)
Query: 88 SVPVSNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
SVP ++++N +R G +K H ++ T +D +D + G ++G R KG
Sbjct: 113 SVPSGEDKNDNVEIRKWGKISNHQKVKEHWEVATKLDLIDFDRGTKISGSRFVVYKGMGA 172
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
L+ L+ + L + ++GY + P ++ ++M L +F E+LY +
Sbjct: 173 KLERALMNFMLDEHAKRGYIEIEPPILVQPQIMYGTGNLPKFKEDLYYI----------- 221
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------- 253
EKD L YLI TSE P+ ++R+ L + LPI + + CFRQE
Sbjct: 222 -EKDNL---YLIPTSEVPVTNLYREEILEKDQLPIYHTAYTPCFRQESGSAGRDTKGIIR 277
Query: 254 --------------------DLTK------------SIAYRVVNIVSGALNHAAAKKLDL 281
+L K I YRV+ + SG + ++ K D+
Sbjct: 278 LHQFKKVEMVKFTTEEASFEELEKMVLDAENILQLLEIPYRVILLCSGDMGFSSTKTYDV 337
Query: 282 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICA 341
E W PG +RE+ SCSNCLD+Q+RR+ +RY + + +I++VH LN + A R+I A
Sbjct: 338 EVWMPGQNKYREISSCSNCLDFQARRMKLRY----RDDNEIKYVHTLNGSGLAIDRLIAA 393
Query: 342 ILETHQTETG-VRIPDCLRKF 361
ILE +Q E G + IP L+ +
Sbjct: 394 ILENYQNEDGTITIPKKLQPY 414
>gi|15594571|ref|NP_212360.1| seryl-tRNA synthetase [Borrelia burgdorferi B31]
gi|218249339|ref|YP_002374749.1| seryl-tRNA synthetase [Borrelia burgdorferi ZS7]
gi|221217803|ref|ZP_03589271.1| seryl-tRNA synthetase [Borrelia burgdorferi 72a]
gi|224533697|ref|ZP_03674285.1| seryl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
gi|225550215|ref|ZP_03771175.1| seryl-tRNA synthetase [Borrelia burgdorferi 118a]
gi|226321544|ref|ZP_03797070.1| seryl-tRNA synthetase [Borrelia burgdorferi Bol26]
gi|387827142|ref|YP_005806424.1| seryl-tRNA synthetase [Borrelia burgdorferi N40]
gi|3915062|sp|O51244.1|SYS_BORBU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|226701651|sp|B7J1F4.1|SYS_BORBZ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|2688129|gb|AAC66622.1| seryl-tRNA synthetase [Borrelia burgdorferi B31]
gi|218164527|gb|ACK74588.1| seryl-tRNA synthetase [Borrelia burgdorferi ZS7]
gi|221192480|gb|EEE18699.1| seryl-tRNA synthetase [Borrelia burgdorferi 72a]
gi|224512990|gb|EEF83353.1| seryl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
gi|225369327|gb|EEG98780.1| seryl-tRNA synthetase [Borrelia burgdorferi 118a]
gi|226232733|gb|EEH31486.1| seryl-tRNA synthetase [Borrelia burgdorferi Bol26]
gi|312148980|gb|ADQ29051.1| seryl-tRNA synthetase [Borrelia burgdorferi N40]
Length = 425
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 162/337 (48%), Gaps = 71/337 (21%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKG---DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGY 139
N L P VP+ ++E++N ++ G + + K H++L +D +D + ++G + Y
Sbjct: 104 NILSPDVPIGSSEEDNFEIKRVGVVPQFDFKPK-DHLELGRDLDLLDFDRAREISGSKFY 162
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
+LK AV L++ L+ ++L+K +KG+ TP +VA+ E + IG
Sbjct: 163 YLKNEAVFLEIALINFSLNKLRDKGFDVFITP---------DVAR-----EFIVDGIGFN 208
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----D 254
+ +S K E DKYL+ TSE + + + + + +LPIR G S CFR+E
Sbjct: 209 PRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAGAYGQ 267
Query: 255 LTKS----------------------------------------IAYRVVNIVSGALNHA 274
L+K I YRV+NI S L
Sbjct: 268 LSKGLYRVHQFSKVEMFCFCKAEESGVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGSP 327
Query: 275 AAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
A KK D+EAW PG G + E+ S SNC DYQSRRL +RY N +F HM+N T
Sbjct: 328 AYKKYDIEAWMPGRDGKGGYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNGT 384
Query: 332 ACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
A ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 385 AIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|167837523|ref|ZP_02464406.1| seryl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|424903230|ref|ZP_18326743.1| seryl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|390931103|gb|EIP88504.1| seryl-tRNA synthetase [Burkholderia thailandensis MSMB43]
Length = 433
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 167/362 (46%), Gaps = 76/362 (20%)
Query: 64 IGEKMKA--------KEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEVR 110
IG++MKA + V D N H SVPV ++E EN VR G D +V+
Sbjct: 78 IGDEMKASAVKLDEIQARVSDLMLQMPNLAHESVPVGSDETENVEVRRWGTPRQFDFDVK 137
Query: 111 KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYAL-SKWIEKGYTPLY 169
HVD+ T + G+D E GA ++G R L+GP L L Q+ L + ++ GY+ Y
Sbjct: 138 ---DHVDVGTPL-GLDFETGAKLSGARFTVLRGPIARLHRALAQFMLDTHTLQHGYSETY 193
Query: 170 TPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVH 229
TP+ + +V+ QL +F E++++V EK G + +YLI+TSE +
Sbjct: 194 TPYIVNPDVLYGTGQLPKFAEDMFRV----EKGG-----AENTVTQYLISTSEISLTNTV 244
Query: 230 RDSWLPEASLPIRYLGVSTCFRQED----------------------------------- 254
RDS + ++LPI+ S CFR E
Sbjct: 245 RDSIVEASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVTPEASYAALD 304
Query: 255 ---------LTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQ 304
L K + YRV+ + +G + +AAK DLE W P +RE+ SCSN +Q
Sbjct: 305 EMVGHAEAILQKLELPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSCSNTESFQ 364
Query: 305 SRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVP 363
+RR+ R+ + K E VH LN + A R + A+LE +Q G V +P LR ++
Sbjct: 365 ARRMQARF---RNAQGKPELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPVALRSYMG 421
Query: 364 AV 365
V
Sbjct: 422 GV 423
>gi|431931654|ref|YP_007244700.1| seryl-tRNA synthetase [Thioflavicoccus mobilis 8321]
gi|431829957|gb|AGA91070.1| seryl-tRNA synthetase [Thioflavicoccus mobilis 8321]
Length = 424
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 162/357 (45%), Gaps = 73/357 (20%)
Query: 63 VIGEKMKA--------KEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--KK 112
+GE++KA +E +G+ + N H SVP +E +N VR G+
Sbjct: 77 ALGEQLKAANAVLQEVQESLGEIALGLPNLPHASVPDGRDEADNQEVRRWGEPRSFDFTP 136
Query: 113 YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALS-KWIEKGYTPLYTP 171
HVDL +D +A A + G R L+GP LQ L Q+ L E GYT +Y P
Sbjct: 137 RDHVDLGAANGWMDFDAAAKLTGSRFVVLRGPLARLQRALTQFMLDVHTAEHGYTEVYVP 196
Query: 172 FFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRD 231
F + + ++ QL +F+ +L+K+ G+ D YLI T+E P+ + RD
Sbjct: 197 FMVNADSLRGTGQLPKFEADLFKLDGE--------------DQYYLIPTAEVPVTNLVRD 242
Query: 232 SWLPEASLPIRYLGVSTCFRQE--------------------DLTK-------------- 257
+ +LP R++ + CFR E +L +
Sbjct: 243 LIVEVDALPCRFVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQVVPPHDSYQALEAL 302
Query: 258 -----------SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSR 306
+ YRVV + +G L +AAK DLE W PG +RE+ SCSN D+Q+R
Sbjct: 303 AGHAETILERLGLPYRVVALCAGDLGFSAAKTYDLEVWLPGQQRYREISSCSNFEDFQAR 362
Query: 307 RLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
RL R+ + K E H LN + A R + A+LE +Q + G +RIPD LR ++
Sbjct: 363 RLQARWRNPE--TGKPELAHTLNGSGLAVGRTLVAVLENYQEQDGRIRIPDALRPYM 417
>gi|453365008|dbj|GAC79260.1| seryl-tRNA synthetase [Gordonia malaquae NBRC 108250]
Length = 418
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 189/433 (43%), Gaps = 95/433 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL + R +P+ VR +Q+ R ++ LVD++++ D+ R +AD +
Sbjct: 1 MIDLKILRD----NPDLVRASQRTRGEDPALVDQLLQADVDRRAAIAEADALRSEQKALG 56
Query: 62 KVIG------------------EKMKA---KEPVGDSSTLP-----GNHLHPSVPVSNNE 95
K +G E++KA ++ D + N + + P +
Sbjct: 57 KQVGKASGDEKTALLARGKELAEQVKAAVARQSEADETATRCQRAISNIVSEATPPGGED 116
Query: 96 DENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
D I E+ H+++ + +D GA V+G R YFL G LQ+GL+
Sbjct: 117 DYVVIEHVGEPREIVDPKDHLEIGERLGLIDMARGAKVSGSRFYFLTGLGAQLQLGLLNM 176
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
A +K G+T + P +R EVMQ L +E+Y++ E DD
Sbjct: 177 AAAKATANGFTLMIPPVLVRPEVMQGTGFLGSHADEVYRL---------------EADDM 221
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE---------------------- 253
YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 222 YLVGTSEVPLAGYHSDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEG 281
Query: 254 ---------------------DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
D+ +I YRV+++ G L +AA+K D EAW P
Sbjct: 282 FVYCRPEDAEAEHQRLLAWEKDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQNT 341
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL VRY + N K + LN T ATTR + AILE HQ
Sbjct: 342 YRELTSTSNCTTFQARRLQVRY---RDENGKAQTAATLNGT-LATTRWLVAILENHQQAD 397
Query: 351 G-VRIPDCLRKFV 362
G V++P+ L +FV
Sbjct: 398 GSVKLPEELARFV 410
>gi|378550993|ref|ZP_09826209.1| hypothetical protein CCH26_12929 [Citricoccus sp. CH26A]
Length = 428
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 152/338 (44%), Gaps = 70/338 (20%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGD-----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGR 137
N + VP + ED+ +++T G + H+++ +I +D E GA V+G R
Sbjct: 104 NLIEDGVP-AGGEDDFTVLKTVGTVRDFAADGFTPRDHLEIGELIGAIDMERGAKVSGSR 162
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
YFLKG L++ L+Q L ++ G+ P+ TP +R E MQ + D+E+YK+
Sbjct: 163 FYFLKGVGARLEIALMQVGLDLAVQNGFIPMITPTLVRPETMQGTGFDVEHDDEIYKL-- 220
Query: 198 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQED--- 254
E DD YL+ TSE + H D L + P RY G STC+R+E
Sbjct: 221 -------------ERDDLYLVGTSEVSLAGYHADEILELGNEPTRYAGWSTCYRREAGAA 267
Query: 255 -----------------------------------------LTK-SIAYRVVNIVSGALN 272
L K + YRV++ +G L
Sbjct: 268 GKDTRGIIRVHQFNKLEMFIYTTQDQAAEEHRRLLDWEEQMLAKVELPYRVIDTAAGDLG 327
Query: 273 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEK--IEFVHMLNA 330
+AA+K D EAW P +REL S SNC +Q+RRL +R + K V LN
Sbjct: 328 MSAARKFDCEAWVPTQQTYRELTSTSNCTTFQARRLNIRERLVNEDGSKGGTRMVATLNG 387
Query: 331 TACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
T ATTR + AILE HQ G V +P+ LR ++ + V
Sbjct: 388 T-LATTRWLVAILENHQNPDGSVTVPEALRPYLGGLEV 424
>gi|15677532|ref|NP_274688.1| seryl-tRNA synthetase [Neisseria meningitidis MC58]
gi|385852718|ref|YP_005899232.1| seryl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|416195570|ref|ZP_11617809.1| seryl-tRNA synthetase [Neisseria meningitidis CU385]
gi|427827314|ref|ZP_18994354.1| seryl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|433465660|ref|ZP_20423133.1| serine--tRNA ligase [Neisseria meningitidis NM422]
gi|433488863|ref|ZP_20446016.1| serine--tRNA ligase [Neisseria meningitidis M13255]
gi|433491047|ref|ZP_20448163.1| serine--tRNA ligase [Neisseria meningitidis NM418]
gi|433505513|ref|ZP_20462447.1| serine--tRNA ligase [Neisseria meningitidis 9506]
gi|433507675|ref|ZP_20464577.1| serine--tRNA ligase [Neisseria meningitidis 9757]
gi|433509879|ref|ZP_20466739.1| serine--tRNA ligase [Neisseria meningitidis 12888]
gi|433511876|ref|ZP_20468693.1| serine--tRNA ligase [Neisseria meningitidis 4119]
gi|30173214|sp|Q9JY95.1|SYS_NEIMB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|7226938|gb|AAF42032.1| seryl-tRNA synthetase [Neisseria meningitidis MC58]
gi|316984831|gb|EFV63788.1| seryl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|325140853|gb|EGC63363.1| seryl-tRNA synthetase [Neisseria meningitidis CU385]
gi|325199722|gb|ADY95177.1| seryl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|389605215|emb|CCA44136.1| seryl-tRNA synthetase [Neisseria meningitidis alpha522]
gi|432201305|gb|ELK57387.1| serine--tRNA ligase [Neisseria meningitidis NM422]
gi|432221938|gb|ELK77740.1| serine--tRNA ligase [Neisseria meningitidis M13255]
gi|432225993|gb|ELK81727.1| serine--tRNA ligase [Neisseria meningitidis NM418]
gi|432239668|gb|ELK95215.1| serine--tRNA ligase [Neisseria meningitidis 9506]
gi|432240113|gb|ELK95656.1| serine--tRNA ligase [Neisseria meningitidis 9757]
gi|432245181|gb|ELL00653.1| serine--tRNA ligase [Neisseria meningitidis 12888]
gi|432245903|gb|ELL01366.1| serine--tRNA ligase [Neisseria meningitidis 4119]
Length = 431
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 150/332 (45%), Gaps = 68/332 (20%)
Query: 86 HPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
H SVP +E EN VR G D E++ HVDL + G+D E GA ++G R
Sbjct: 110 HESVPAGKDETENVEVRKVGTPREFDFEIK---DHVDLGEPL-GLDFEGGAKLSGARFTV 165
Query: 141 LKGPAVCLQVGLVQYAL-SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
++G L L Q+ L + ++ GYT YTP+ + +Q QL +F E+L+ V G
Sbjct: 166 MRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGG 225
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
++ + +YLI T+E + DS +P LP++ S CFR E
Sbjct: 226 DETKTT---------QYLIPTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGK 276
Query: 254 -------------------------------------DLTKSI--AYRVVNIVSGALNHA 274
++ K++ YRV+ + +G +
Sbjct: 277 DTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMGFG 336
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
AAK DLE W P +RE+ SCSNC D+Q+RRL R+ K N K VH LN + A
Sbjct: 337 AAKTYDLEVWVPAQNTYREISSCSNCEDFQARRLKARF---KDENGKNRLVHTLNGSGLA 393
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
R + A+LE HQ G + IP L+ ++ V
Sbjct: 394 VGRTLVAVLENHQNADGSINIPAALQPYMGGV 425
>gi|383453974|ref|YP_005367963.1| seryl-tRNA synthetase [Corallococcus coralloides DSM 2259]
gi|380734330|gb|AFE10332.1| seryl-tRNA synthetase [Corallococcus coralloides DSM 2259]
Length = 426
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 147/328 (44%), Gaps = 64/328 (19%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
N H SVPV + DEN V+T G+ + H +L + +D E A V+G R F
Sbjct: 106 NVPHESVPVGASADENVQVKTWGEKPNLLFTPKQHFELGESLGMLDFERAAKVSGSRFTF 165
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
KG L+ LV + + KGYT L P+ + +E M QL +F+++ +K G E
Sbjct: 166 YKGALARLERALVTFMIDVHTSKGYTELLPPYLVLRETMMGTGQLPKFEDDAFKTSGDPE 225
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------- 253
++LI T+E P+ H D L LPIRY S CFR E
Sbjct: 226 --------------RFLIPTAEVPVTNYHADEILEGEQLPIRYCAFSPCFRAEAGAAGRD 271
Query: 254 ------------------------------------DLTKSIA--YRVVNIVSGALNHAA 275
D+ + + +RV+ + +G + A
Sbjct: 272 TRGLIRQHQFHKVELVKFSQPDKSLDELEAMTDDACDILRRLGLHHRVMLLCTGDMGFGA 331
Query: 276 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACAT 335
K D+E W PG GA+RE+ SCS+C D+Q+RR +R+ K +K + VH LN + A
Sbjct: 332 RKTYDIEVWLPGQGAYREISSCSDCGDFQARRAKIRFRPQK--GDKPQMVHTLNGSGLAV 389
Query: 336 TRVICAILETHQTETG-VRIPDCLRKFV 362
R AILE +Q E G V IP+ L ++
Sbjct: 390 GRTSIAILENYQREDGSVAIPEALVPYM 417
>gi|148657569|ref|YP_001277774.1| seryl-tRNA synthetase [Roseiflexus sp. RS-1]
gi|166223283|sp|A5UYX1.1|SYS_ROSS1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|148569679|gb|ABQ91824.1| seryl-tRNA synthetase [Roseiflexus sp. RS-1]
Length = 424
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 183/441 (41%), Gaps = 96/441 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ L R + P+ V+ + + VD V+ D + R + + +N S
Sbjct: 1 MLDIRLIREQ----PDLVKASLGRTGVDPAQVDAVLAYDEQRRALLREVEQLKALRNAVS 56
Query: 62 KVIGE---------KMKAKEPVGDSSTLPGNHL------------------HPSVPVSNN 94
K IG+ K+ VGD L HPSVP +
Sbjct: 57 KEIGKMSDAAARDAKIAEMRAVGDRIAELDRELAAVEEQQYAALMELRNLPHPSVPDGPD 116
Query: 95 EDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGL 152
E N ++ +G+ H +L +D +D E G ++G R Y LKGP LQ L
Sbjct: 117 ETYNVVIAQEGEPRTFDFTPKPHWELGEALDIIDFERGVKLSGSRFYVLKGPGARLQRAL 176
Query: 153 VQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDEL 212
+Q+ L ++GY +YTPF ++++ M QL +F + LY +D
Sbjct: 177 IQWMLDLHGKQGYDEVYTPFVVKEQCMWGARQLPKFRDNLY---------------RDVE 221
Query: 213 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTK--------------- 257
DD +L+ T+E P+ +HRD L LP+RY + CFR+E ++
Sbjct: 222 DDLWLVPTAEVPVTNLHRDEILDADQLPLRYCAYTPCFRREKMSAGRDVRGIKRGHQFDK 281
Query: 258 ------------------------------SIAYRVVNIVSGALNHAAAKKLDLEAWFPG 287
+ +R + +G L AA + D+E W PG
Sbjct: 282 VEMYMFVRPETSYDELEKLRADAEETCRLLGLPFRTKELCTGDLGFAATRTYDIEVWAPG 341
Query: 288 SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQ 347
G + E+ SCSN +Q+R +RY + + E+VH LN + R + AILE +Q
Sbjct: 342 QGEWLEVSSCSNVEAFQARAANIRY--RPEPGARPEYVHTLNGSGLGLPRTLIAILENYQ 399
Query: 348 TETG-VRIPDCLRKFVPAVYV 367
G V IP+ LR ++ + V
Sbjct: 400 QADGSVVIPEVLRPYMGGIEV 420
>gi|375139098|ref|YP_004999747.1| seryl-tRNA synthetase [Mycobacterium rhodesiae NBB3]
gi|359819719|gb|AEV72532.1| seryl-tRNA synthetase [Mycobacterium rhodesiae NBB3]
Length = 431
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 186/433 (42%), Gaps = 95/433 (21%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
V+DL L R +P+ VR +Q+ R ++ LVD +++ D R ADN + S
Sbjct: 13 VIDLKLLRE----NPDTVRASQRARGEDPALVDALLDADAARRSAVSAADNLRAEQKAES 68
Query: 62 KVIGEKMKAKEPV----------------GDSSTLPGNHLHPSVPVSN---------NED 96
K +G+ + P + S + +SN ED
Sbjct: 69 KKVGKASPDERPALLAAAKALAEKVKAAEAEQSETDAAFTRAHMALSNVIIDGVPAGGED 128
Query: 97 ENGIVRTKGDTE-VRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQY 155
+ ++ T G+ + + HV+L + +D E GA V+G R YFL G LQ+GL+Q
Sbjct: 129 DFVVLDTVGEPRAIDRPKDHVELGESLGLIDLERGAKVSGSRFYFLTGAGAFLQLGLLQL 188
Query: 156 ALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDK 215
A E G+T + P +R EVM L EE+Y + DD
Sbjct: 189 AARLAQENGFTLMIPPVLVRPEVMAGTGFLGAHAEEVYHLAA---------------DDL 233
Query: 216 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKS----------------- 258
YL+ TSE + H D L ++ P+RY G S+CFR+E +
Sbjct: 234 YLVGTSEVALAGYHSDEILDLSNGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEG 293
Query: 259 ----------------------------IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGA 290
+ YRV++I +G L +AA+K D EAW P
Sbjct: 294 FIYCKPEDAETEHQRLLGWERQMLANIDVPYRVIDIAAGDLGSSAARKFDCEAWIPTQNT 353
Query: 291 FRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTET 350
+REL S SNC +Q+RRL VRY + N K + LN T ATTR + AILE HQ
Sbjct: 354 YRELTSTSNCTTFQARRLAVRY---RDENGKPQTAATLNGT-LATTRWLVAILENHQQPD 409
Query: 351 G-VRIPDCLRKFV 362
G VR+P+ L FV
Sbjct: 410 GSVRVPEALVPFV 422
>gi|448490680|ref|ZP_21608138.1| seryl-tRNA ligase [Halorubrum californiensis DSM 19288]
gi|445693798|gb|ELZ45940.1| seryl-tRNA ligase [Halorubrum californiensis DSM 19288]
Length = 456
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 194/445 (43%), Gaps = 99/445 (22%)
Query: 15 DPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGE-------- 66
+PE VR+ +++ +V+L D++++ D +WR+ + + D+ +N S IGE
Sbjct: 10 NPEVVREALENKGVDVDL-DRILDVDEEWRELKQRGDDLRHERNEVSSKIGELKGAGEEA 68
Query: 67 --------------KMKAKEPVGDSSTLPGNHL--------HPSVPVSNNEDENGIVRTK 104
+++A E D SVP+ +E EN R +
Sbjct: 69 AAQEAIERSQDLKAELQAIEKRADELEAELEESLLELPQIPQESVPIGEDESENVERRRE 128
Query: 105 GDTEVRKKYS----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW 160
G ++R + H DL ++ +D E GA VAGG Y KG L+ L+Q+ L
Sbjct: 129 GFDDLRDVPADVEPHYDLGEDLEILDFERGAKVAGGGFYVAKGDGARLEHALIQFMLDVH 188
Query: 161 IEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIAT 220
E+GY ++ P + M+ QL +F E+ Y+V G E+ D DD +L+ T
Sbjct: 189 REQGYEDVFPPIPVNSASMRGTGQLPKFTEDAYRVEGTNEEEYDD-------DDLWLLPT 241
Query: 221 SEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----DLTKSIA--------------- 260
+E P+ +HRD L LP++Y + FRQE T+ I
Sbjct: 242 AEVPVTNLHRDEILLGEDLPLKYQAYTPNFRQEAGEHGTETRGIVRVHQFNKVEMVNFVR 301
Query: 261 -------------------------YRVVNIVSGALNHAAAKKLDLEAWFPG-------- 287
YR++ + +G L AKK D+E W P
Sbjct: 302 PEESDERFEGLVDEAEEVLRRLDLPYRILEMCTGDLGFTQAKKYDVEVWAPADDMEEGPE 361
Query: 288 -SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETH 346
G + E+ S SN D+Q+RR ++Y ++ +E E++H LN + A R++ AILE +
Sbjct: 362 QGGRWLEVSSVSNFEDFQARRAGIQY--REEHHESAEYLHTLNGSGLAVPRIVVAILEYY 419
Query: 347 QTETG-VRIPDCLRKFVPAVYVNEA 370
Q + G V +P+ LR ++ V E
Sbjct: 420 QNDDGTVTVPEALRPYMGGTEVIEG 444
>gi|255066517|ref|ZP_05318372.1| serine--tRNA ligase [Neisseria sicca ATCC 29256]
gi|255049101|gb|EET44565.1| serine--tRNA ligase [Neisseria sicca ATCC 29256]
Length = 431
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 152/337 (45%), Gaps = 68/337 (20%)
Query: 86 HPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
H SVPV +E EN VR G D E++ HVDL + G+D E GA ++G R
Sbjct: 110 HESVPVGKDETENVEVRKVGTPREFDFEIK---DHVDLGEPL-GLDFEGGAKLSGARFTV 165
Query: 141 LKGPAVCLQVGLVQYAL-SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
+KG L L Q+ L + ++ GYT YTP+ + +Q QL +F E+L+ V G
Sbjct: 166 MKGQIARLHRALAQFMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGG 225
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------ 253
++ + +YLI T+E + DS L E LP++ S CFR E
Sbjct: 226 DESKKT---------QYLIPTAEVTLTNTVADSILAEGDLPLKLTAHSPCFRSEAGAYGK 276
Query: 254 -------------------------------------DLTKSI--AYRVVNIVSGALNHA 274
++ K++ YRV+ + +G +
Sbjct: 277 DVRGLIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAENILKALELPYRVITLCTGDMGFG 336
Query: 275 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACA 334
A K DLE W P +RE+ SCSNC D+Q+RR+ R+ K N K VH LN + A
Sbjct: 337 ATKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARF---KDENGKNRLVHTLNGSGLA 393
Query: 335 TTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEA 370
R + A+LE HQ G + IP L+ ++ V EA
Sbjct: 394 VGRTLVAVLENHQNADGSINIPAALQPYMGGVTKLEA 430
>gi|224035863|gb|ACN37007.1| unknown [Zea mays]
Length = 383
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 169/350 (48%), Gaps = 81/350 (23%)
Query: 76 DSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAI 132
++ ++P N HP VPV +E+ ++R + ++ ++ H+ L +D D +A A
Sbjct: 41 EAQSIP-NTTHPDVPVGG--EESSVLRKEVGSQRSFNFAIKDHLQLGKELDLFDFDAAAE 97
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEE 191
V+G + Y+LK AV L++ LV +A+S+ +KG+TPL TP +R V+++ Q + +
Sbjct: 98 VSGSKFYYLKNEAVLLEMALVNWAISEVSKKGFTPLITPEIVRSSVVEKCGFQPRAKNTQ 157
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
+Y + E D+ LI T+E P+ +H DS L E++LP++Y+ S CFR
Sbjct: 158 VYSI---------------EDSDQCLIGTAEIPVGGIHMDSILAESALPLKYVAYSHCFR 202
Query: 252 -------------------------------------------QEDLTKSIA--YRVVNI 266
+EDL S+ ++ +++
Sbjct: 203 TEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESGKWHEELITIEEDLYASLGLHFKTLDM 262
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM-------- 318
+G L A +K D+EAW PG + E+ S SNC DYQSRRL +RY +
Sbjct: 263 ATGDLGAPAYRKFDIEAWMPGLERYGEISSASNCTDYQSRRLGIRYRPSPSEPPSTSTKK 322
Query: 319 -----NEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+ +FVH LNATA A R+I ILE Q G + +P+ LR ++
Sbjct: 323 GKGAASGPTQFVHTLNATAVAVPRLIVCILENFQQGDGSIVVPEPLRPYM 372
>gi|413920454|gb|AFW60386.1| hypothetical protein ZEAMMB73_399106 [Zea mays]
Length = 511
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 168/350 (48%), Gaps = 81/350 (23%)
Query: 76 DSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYS---HVDLITMIDGVDSEAGAI 132
++ ++P N HP VPV +E+ ++R + ++ ++ H+ L +D D +A A
Sbjct: 169 EAQSIP-NTTHPDVPVGG--EESSVLRKEVGSQRSFNFAIKDHLQLGKELDLFDFDAAAE 225
Query: 133 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA-QLAQFDEE 191
V+G + Y+LK AV L++ LV +A+S+ +KG+TPL TP +R V+++ Q + +
Sbjct: 226 VSGSKFYYLKNEAVLLEMALVNWAISEVSKKGFTPLITPEIVRSSVVEKCGFQPRAKNTQ 285
Query: 192 LYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 251
+Y + E D+ LI T+E P+ +H DS L E++LP++Y+ S CFR
Sbjct: 286 VYSI---------------EDSDQCLIGTAEIPVGGIHMDSILAESALPLKYVAYSHCFR 330
Query: 252 -------------------------------------------QEDLTKSIA--YRVVNI 266
+EDL S+ ++ +++
Sbjct: 331 TEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESGKWHEELITIEEDLYASLGLHFKTLDM 390
Query: 267 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEK----- 321
+G L A +K D+EAW PG + E+ S SNC DYQSRRL +RY +
Sbjct: 391 ATGDLGAPAYRKFDIEAWMPGLERYGEISSASNCTDYQSRRLGIRYRPSPSEPPSTSTKK 450
Query: 322 --------IEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+FVH LNATA A R+I ILE Q G + +P+ LR ++
Sbjct: 451 GKGAASGPTQFVHTLNATAVAVPRLIVCILENFQQGDGSIVVPEPLRPYM 500
>gi|195941420|ref|ZP_03086802.1| seryl-tRNA synthetase [Borrelia burgdorferi 80a]
gi|216264477|ref|ZP_03436469.1| seryl-tRNA synthetase [Borrelia burgdorferi 156a]
gi|223888685|ref|ZP_03623276.1| seryl-tRNA synthetase [Borrelia burgdorferi 64b]
gi|225549035|ref|ZP_03770010.1| seryl-tRNA synthetase [Borrelia burgdorferi 94a]
gi|387825880|ref|YP_005805333.1| seryl-tRNA synthetase [Borrelia burgdorferi JD1]
gi|215980950|gb|EEC21757.1| seryl-tRNA synthetase [Borrelia burgdorferi 156a]
gi|223885501|gb|EEF56600.1| seryl-tRNA synthetase [Borrelia burgdorferi 64b]
gi|225370261|gb|EEG99699.1| seryl-tRNA synthetase [Borrelia burgdorferi 94a]
gi|312148176|gb|ADQ30835.1| seryl-tRNA synthetase [Borrelia burgdorferi JD1]
Length = 425
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 162/337 (48%), Gaps = 71/337 (21%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKG---DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGY 139
N L P VP+ ++E++N ++ G + + K H++L +D +D + ++G + Y
Sbjct: 104 NILSPDVPIGSSEEDNFEIKRVGVVPQFDFKPK-DHLELGRDLDLLDFDRAREISGSKFY 162
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
+LK AV L++ L+ ++L+K +KG+ TP +VA+ E + IG
Sbjct: 163 YLKNEAVFLEIALINFSLNKLRDKGFDVFITP---------DVAR-----EFIVDGIGFN 208
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----D 254
+ +S K E DKYL+ TSE + + + + + +LPIR G S CFR+E
Sbjct: 209 PRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAGAYGQ 267
Query: 255 LTKS----------------------------------------IAYRVVNIVSGALNHA 274
L+K I YR++NI S L
Sbjct: 268 LSKGLYRVHQFSKVEMFCFCKAEESGVIHDEFLSIQEQIFTELEIPYRILNICSFDLGSP 327
Query: 275 AAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
A KK D+EAW PG G + E+ S SNC DYQSRRL +RY N +F HM+N T
Sbjct: 328 AYKKYDIEAWMPGRDGKGGYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNGT 384
Query: 332 ACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
A ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 385 AIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|441514857|ref|ZP_20996670.1| seryl-tRNA synthetase [Gordonia amicalis NBRC 100051]
gi|441450340|dbj|GAC54631.1| seryl-tRNA synthetase [Gordonia amicalis NBRC 100051]
Length = 419
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 145/326 (44%), Gaps = 64/326 (19%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLK 142
N + P P +D + E+ H++L + +D E GA V+G R YFL
Sbjct: 104 NIVAPEAPAGGEDDYVVLEHVGEPREIENPKDHLELGESLGLLDMERGAKVSGSRFYFLT 163
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
G LQ+GL+ A K G+T + P +R EVM+ L +E+Y +
Sbjct: 164 GQGAFLQLGLLNMAAQKAAANGFTLMVPPVLVRPEVMEGTGFLGSHADEVYHL------- 216
Query: 203 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE--------- 253
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 217 -------DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTR 269
Query: 254 ----------------------------------DLTKSI--AYRVVNIVSGALNHAAAK 277
D+ +I YRV+++ G L +A++
Sbjct: 270 GIIRVHQFDKVEGFIYCKPEDAEAEHRRLLGWEKDMLAAIDVPYRVIDVAGGDLGSSASR 329
Query: 278 KLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTR 337
K D EAW P +REL S SNC +Q+RRL +RY + N K + LN T ATTR
Sbjct: 330 KFDCEAWVPTQNTYRELTSTSNCTTFQARRLSIRY---RDENGKPQIAATLNGT-LATTR 385
Query: 338 VICAILETHQTETG-VRIPDCLRKFV 362
+ AILE HQ G V++P L K+V
Sbjct: 386 WLVAILENHQQPDGSVKLPAELAKYV 411
>gi|402311797|ref|ZP_10830728.1| serine--tRNA ligase [Lachnospiraceae bacterium ICM7]
gi|400370944|gb|EJP23923.1| serine--tRNA ligase [Lachnospiraceae bacterium ICM7]
Length = 427
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 191/443 (43%), Gaps = 106/443 (23%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVEL--VDKVIENDLKWRQFRHKADNFNKFKNL 59
++D+ R +P+ VR+N K++F++ +L VD+VIE D K R+ + +AD +N
Sbjct: 1 MIDIKFLRE----NPDIVRQNIKNKFQDFKLPMVDEVIELDEKLRKTKAEADELRSKRNK 56
Query: 60 CSKVIG-----------EKMKAK-EPVGDS-------------------STLPGNHLHPS 88
SK IG E++KA +G++ T+P N + PS
Sbjct: 57 ISKEIGALMAQGKKEEAEQIKASVASIGETLAGLEPLEAELEEKVKKIMMTIP-NIIDPS 115
Query: 89 VPVSNNEDENGIVRTKGDT---EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPA 145
VP+ ++ EN + G+ E Y H D++ ++G+D ++ VAG Y+L G
Sbjct: 116 VPIGKDDSENVEIEKFGEPFVPEFEIPY-HTDIMEKLNGIDLDSARKVAGNGFYYLMGDI 174
Query: 146 VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDS 205
L ++ YA IE+G+T PF +R EV+ V A+ D +YK+ G
Sbjct: 175 ARLHSAVISYARDFMIERGFTYCIPPFMIRSEVVTGVMSFAEMDAMMYKIEG-------- 226
Query: 206 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------ 253
+D YLI TSE + D+ EA LP S CFR+E
Sbjct: 227 -------EDLYLIGTSEHSMIGKFIDTLNDEAKLPYTLTSYSPCFRKEKGAHGIEERGVY 279
Query: 254 -------------------------------DLTKS--IAYRVVNIVSGALNHAAAKKLD 280
DL +S + R + SG L K D
Sbjct: 280 RIHQFEKQEMIVVCKPEESKMWYEKLWQNTVDLFRSLDVPVRTLECCSGDLADLKVKSCD 339
Query: 281 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 340
+EAW P + E+ SCSN D QSRRL +R K N F H LN T A R++
Sbjct: 340 VEAWSPRQKKYFEVGSCSNLGDAQSRRLRIR---VKDENGNKYFAHTLNNTVVAPPRMLI 396
Query: 341 AILETHQTETG-VRIPDCLRKFV 362
A LE + E G +RIP LR ++
Sbjct: 397 AFLENNLNEDGSIRIPVALRPYM 419
>gi|224532643|ref|ZP_03673264.1| serine--tRNA ligase [Borrelia burgdorferi WI91-23]
gi|224512423|gb|EEF82803.1| serine--tRNA ligase [Borrelia burgdorferi WI91-23]
Length = 425
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 162/337 (48%), Gaps = 71/337 (21%)
Query: 83 NHLHPSVPVSNNEDENGIVRTKG---DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGY 139
N L P VP+ ++E++N ++ G + + K H++L +D +D + ++G + Y
Sbjct: 104 NVLSPDVPIGSSEEDNFEIKRVGVVPQFDFKPK-DHLELGRDLDLLDFDRAREISGSKFY 162
Query: 140 FLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKG 199
+LK AV L++ L+ ++L+K +KG+ TP +VA+ E + IG
Sbjct: 163 YLKNEAVFLEIALINFSLNKLRDKGFDVFITP---------DVAR-----EFIVDGIGFN 208
Query: 200 EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE-----D 254
+ +S K E DKYL+ TSE + + + + + +LPIR G S CFR+E
Sbjct: 209 PRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAGAYGQ 267
Query: 255 LTKS----------------------------------------IAYRVVNIVSGALNHA 274
L+K I YR++NI S L
Sbjct: 268 LSKGLYRVHQFSKVEMFCFCKAEESGVIHDEFLSIQEQIFTELEIPYRILNICSFDLGSP 327
Query: 275 AAKKLDLEAWFPG---SGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 331
A KK D+EAW PG G + E+ S SNC DYQSRRL +RY N +F HM+N T
Sbjct: 328 AYKKYDIEAWMPGRDGKGGYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNGT 384
Query: 332 ACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 367
A ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 385 AIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|85859585|ref|YP_461787.1| seryl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85722676|gb|ABC77619.1| seryl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 448
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 190/438 (43%), Gaps = 99/438 (22%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD+ R + + V+K ++R + ++L + D + R + ++ +N S
Sbjct: 24 MLDIKFLRQ----NVDLVKKKIEERGQGIDL-SAFVSMDAERRDILQEVESLRNERNAVS 78
Query: 62 KVIGEKMKAKEPVGD----SSTLPG------------------------NHLHPSVPVSN 93
+ IGE+ K KE D T+ G N H SV
Sbjct: 79 RHIGERKKRKEDAQDLIDRMGTVSGRIRELEEGLKETEENLHNLLLTIPNIPHESVVCGV 138
Query: 94 NEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVG 151
N ++N +VR G+ + H ++ + +D GA + G R +G L+
Sbjct: 139 NAEDNPVVRVWGEKPLFDFSPKPHWEIGEDLSILDFARGAKITGARFTLYRGAGAMLERA 198
Query: 152 LVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
++ + L I E GYT + PF ++ M QL +F E+L+K+
Sbjct: 199 IINFMLDLHIMEHGYTEILPPFMANRDSMTGTGQLPKFAEDLFKI--------------- 243
Query: 211 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE----------------- 253
E + YLI T+E P+ +HR+ L E +LPI Y+ S CFR E
Sbjct: 244 ENLEYYLIPTAEVPVTNIHREEILEEKALPIYYVAYSPCFRAEAGSYGKDTRGLIRQHQF 303
Query: 254 ----------------DLTK------------SIAYRVVNIVSGALNHAAAKKLDLEAWF 285
+L K +I YR V++ +G L ++AK D+EAW
Sbjct: 304 NKVEMVKFTSPETSYDELEKLTVNAEEVLKRLNIPYRTVSLCTGDLGFSSAKTYDVEAWL 363
Query: 286 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILET 345
PG +RE+ SCSN D+Q+RR +R+ ++ K++FVH LN + A R + A+LE
Sbjct: 364 PGQDTYREISSCSNFEDFQARRASIRF--RRESTGKLDFVHTLNGSGLAAGRTLVAVLEN 421
Query: 346 HQTETG-VRIPDCLRKFV 362
+Q G + IPD LR ++
Sbjct: 422 YQQADGSIVIPDVLRPYM 439
>gi|416910946|ref|ZP_11931522.1| seryl-tRNA synthetase [Burkholderia sp. TJI49]
gi|325528345|gb|EGD05497.1| seryl-tRNA synthetase [Burkholderia sp. TJI49]
Length = 433
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 168/359 (46%), Gaps = 76/359 (21%)
Query: 64 IGEKMKAKEPVGD------SSTLPG--NHLHPSVPVSNNEDENGIVRTKG-----DTEVR 110
IG++MKA D S + G N H SVPV +E +N VR G D +V+
Sbjct: 78 IGDEMKASATQLDEIQQRLSDLMLGMPNIAHESVPVGKDETDNVEVRRWGTPRQFDFDVK 137
Query: 111 KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLY 169
HVD+ T + G+D E GA +AG R L+GP L L Q+ L ++ GY+ Y
Sbjct: 138 ---DHVDVGTPL-GLDFETGAKLAGARFTMLRGPIARLHRALAQFMLDTHTQQHGYSETY 193
Query: 170 TPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVH 229
TP+ + E++ QL +F +++++V EK G + +YLI+TSE +
Sbjct: 194 TPYIVNPEILYGTGQLPKFADDMFRV----EKGG-----AENTVTQYLISTSEISLTNTV 244
Query: 230 RDSWLPEASLPIRYLGVSTCFRQE--------------------DLTKSIA--------- 260
RDS + ++LPI+ S CFR E ++ + +A
Sbjct: 245 RDSIVEASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPETSYAALD 304
Query: 261 ----------------YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQ 304
YRV+ + +G + +AAK DLE W P +RE+ SCSN +Q
Sbjct: 305 EMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSCSNTEAFQ 364
Query: 305 SRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+RR+ R+ + K E VH LN + A R + A+LE +Q G V +P+ LR ++
Sbjct: 365 ARRMQARF---RNAQGKPELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEALRPYM 420
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,605,872,327
Number of Sequences: 23463169
Number of extensions: 288999774
Number of successful extensions: 783186
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4908
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 758738
Number of HSP's gapped (non-prelim): 11020
length of query: 399
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 254
effective length of database: 8,957,035,862
effective search space: 2275087108948
effective search space used: 2275087108948
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)