Your job contains 1 sequence.
>psy10034
MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC
SKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLIT
MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQ
EVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP
IRYLGVSTCFRQEDLTKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNC
LDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRK
FVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10034
(399 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031497 - symbol:CG17259 species:7227 "Drosophila ... 609 5.0e-140 3
MGI|MGI:102809 - symbol:Sars "seryl-aminoacyl-tRNA synthe... 601 2.2e-133 3
RGD|628813 - symbol:Sars "seryl-tRNA synthetase" species:... 591 1.2e-132 3
UNIPROTKB|Q6P799 - symbol:Sars "Serine--tRNA ligase, cyto... 591 1.2e-132 3
ZFIN|ZDB-GENE-040831-1 - symbol:sars "seryl-tRNA syntheta... 570 3.1e-132 3
UNIPROTKB|E2R4D5 - symbol:SARS "Uncharacterized protein" ... 586 1.0e-131 3
UNIPROTKB|P49591 - symbol:SARS "Serine--tRNA ligase, cyto... 580 1.0e-131 3
UNIPROTKB|Q5T5C7 - symbol:SARS "Serine--tRNA ligase, cyto... 580 3.4e-131 4
WB|WBGene00005663 - symbol:sars-1 species:6239 "Caenorhab... 560 2.2e-125 3
UNIPROTKB|F1S5Z3 - symbol:SARS "Uncharacterized protein" ... 585 1.9e-104 2
UNIPROTKB|Q9GMB8 - symbol:SARS "Serine--tRNA ligase, cyto... 583 1.9e-104 2
DICTYBASE|DDB_G0272660 - symbol:serS "seryl-tRNA syntheta... 411 1.4e-86 3
TAIR|locus:2146400 - symbol:AT5G27470 species:3702 "Arabi... 391 4.6e-86 3
POMBASE|SPAC29A4.15 - symbol:SPAC29A4.15 "cytoplasmic ser... 360 1.7e-82 3
ASPGD|ASPL0000077121 - symbol:AN8867 species:162425 "Emer... 387 2.2e-80 3
CGD|CAL0004049 - symbol:SES1 species:5476 "Candida albica... 355 2.0e-65 2
UNIPROTKB|Q5AEJ9 - symbol:SES1 "Potential serine tRNA syn... 355 2.0e-65 2
SGD|S000002430 - symbol:SES1 "Cytosolic seryl-tRNA synthe... 345 2.9e-64 2
GENEDB_PFALCIPARUM|PF07_0073 - symbol:PF07_0073 "seryl-tR... 245 1.2e-41 3
UNIPROTKB|Q8IBS3 - symbol:PF07_0073 "Seryl-tRNA synthetas... 245 1.2e-41 3
UNIPROTKB|H9KYV2 - symbol:SARS "Uncharacterized protein" ... 418 3.7e-39 1
UNIPROTKB|P67561 - symbol:serS "Serine--tRNA ligase" spec... 228 1.2e-38 3
TAIR|locus:2008865 - symbol:SRS "Seryl-tRNA synthetase" s... 227 5.2e-35 2
TIGR_CMR|BA_0012 - symbol:BA_0012 "seryl-tRNA synthetase"... 214 4.1e-33 2
TIGR_CMR|GSU_0037 - symbol:GSU_0037 "seryl-tRNA synthetas... 236 1.3e-32 2
UNIPROTKB|Q9KSZ6 - symbol:serS "Serine--tRNA ligase" spec... 197 9.1e-31 3
TIGR_CMR|VC_1110 - symbol:VC_1110 "seryl-tRNA synthetase"... 197 9.1e-31 3
ZFIN|ZDB-GENE-040426-1616 - symbol:sars2 "seryl-tRNA synt... 253 1.5e-29 2
TIGR_CMR|CHY_2697 - symbol:CHY_2697 "seryl-tRNA synthetas... 216 2.3e-29 2
TIGR_CMR|DET_0577 - symbol:DET_0577 "seryl-tRNA synthetas... 198 3.5e-29 2
RGD|1309456 - symbol:Sars2 "seryl-tRNA synthetase 2, mito... 219 3.6e-29 2
UNIPROTKB|G8JKV4 - symbol:SARS2 "Serine--tRNA ligase, mit... 218 8.6e-29 2
MGI|MGI:1919234 - symbol:Sars2 "seryl-aminoacyl-tRNA synt... 219 9.4e-29 2
UNIPROTKB|E7EX87 - symbol:SARS2 "Serine--tRNA ligase, mit... 222 1.1e-28 2
UNIPROTKB|Q9NP81 - symbol:SARS2 "Serine--tRNA ligase, mit... 222 1.1e-28 2
UNIPROTKB|Q9N0F3 - symbol:SARS2 "Serine--tRNA ligase, mit... 218 1.6e-28 2
TIGR_CMR|APH_0427 - symbol:APH_0427 "seryl-tRNA synthetas... 246 5.5e-28 2
TIGR_CMR|CBU_1188 - symbol:CBU_1188 "seryl-tRNA synthetas... 225 2.2e-27 2
UNIPROTKB|E2QUT6 - symbol:FBXO17 "Uncharacterized protein... 223 3.9e-27 2
TIGR_CMR|CPS_2755 - symbol:CPS_2755 "seryl-tRNA synthetas... 186 2.1e-26 2
TIGR_CMR|CJE_0438 - symbol:CJE_0438 "seryl-tRNA synthetas... 218 2.9e-26 2
TIGR_CMR|NSE_0569 - symbol:NSE_0569 "seryl-tRNA synthetas... 227 4.3e-26 3
TIGR_CMR|SO_2310 - symbol:SO_2310 "seryl-tRNA synthetase"... 199 5.6e-26 2
SGD|S000001053 - symbol:DIA4 "Probable mitochondrial sery... 232 5.2e-25 2
UNIPROTKB|P0A8L1 - symbol:serS "seryl-tRNA synthetase" sp... 187 1.5e-24 3
POMBASE|SPAC25B8.06c - symbol:SPAC25B8.06c "mitochondrial... 237 8.4e-24 2
CGD|CAL0002761 - symbol:orf19.1201 species:5476 "Candida ... 202 1.3e-23 2
FB|FBgn0021750 - symbol:Aats-ser "Seryl-tRNA synthetase" ... 208 3.1e-22 2
TIGR_CMR|ECH_0584 - symbol:ECH_0584 "seryl-tRNA synthetas... 204 2.1e-21 3
TIGR_CMR|SPO_2325 - symbol:SPO_2325 "seryl-tRNA synthetas... 176 9.3e-20 2
DICTYBASE|DDB_G0267604 - symbol:mserS "serine-tRNA ligase... 129 3.6e-19 4
GENEDB_PFALCIPARUM|PFL0770w - symbol:PFL0770w "seryl-tRNA... 175 7.5e-19 2
UNIPROTKB|Q8I5P7 - symbol:PFL0770w "Serine--tRNA ligase, ... 175 7.5e-19 2
ASPGD|ASPL0000036378 - symbol:sgdB species:162425 "Emeric... 154 8.8e-19 2
WB|WBGene00005662 - symbol:sars-2 species:6239 "Caenorhab... 188 9.8e-19 2
UNIPROTKB|F1RI32 - symbol:FBXO17 "Uncharacterized protein... 166 2.5e-09 1
UNIPROTKB|Q58CS4 - symbol:SARS2 "Seryl-tRNA synthetase 2"... 142 4.0e-07 1
>FB|FBgn0031497 [details] [associations]
symbol:CG17259 species:7227 "Drosophila melanogaster"
[GO:0004828 "serine-tRNA ligase activity" evidence=ISS] [GO:0006434
"seryl-tRNA aminoacylation" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA]
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005737 EMBL:AE014134 SUPFAM:SSF46589
GeneTree:ENSGT00660000095591 KO:K01875 OMA:KSIGEKM GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 HSSP:P34945 FlyBase:FBgn0031497 EMBL:BT016042
RefSeq:NP_608743.2 UniGene:Dm.1209 SMR:Q9VQL1 IntAct:Q9VQL1
MINT:MINT-967129 STRING:Q9VQL1 EnsemblMetazoa:FBtr0077667
GeneID:33518 KEGG:dme:Dmel_CG17259 UCSC:CG17259-RA
InParanoid:Q9VQL1 GenomeRNAi:33518 NextBio:784000 Uniprot:Q9VQL1
Length = 501
Score = 609 (219.4 bits), Expect = 5.0e-140, Sum P(3) = 5.0e-140
Identities = 118/172 (68%), Positives = 138/172 (80%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GNHLH SVPVSN+EDEN + RT GD E R KYSHVDLI MIDG+++E GA+V+GGRGYFL
Sbjct: 138 GNHLHESVPVSNDEDENRVERTFGDCEKRGKYSHVDLIVMIDGMNAEKGAVVSGGRGYFL 197
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
G AV L+ L+Q+AL + Y PLYTPFFMRKEVMQEVAQL+QFDEELYKV+GKG +
Sbjct: 198 TGAAVFLEQALIQHALHLLYARDYVPLYTPFFMRKEVMQEVAQLSQFDEELYKVVGKGSE 257
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
E+ +D+KYLIATSEQPI A HRD WLPE+SLPI+Y G+STCFRQE
Sbjct: 258 KA----EEVGIDEKYLIATSEQPIAAYHRDEWLPESSLPIKYAGLSTCFRQE 305
Score = 504 (182.5 bits), Expect = 5.0e-140, Sum P(3) = 5.0e-140
Identities = 95/124 (76%), Positives = 111/124 (89%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YRVVNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVR+GQTKKM
Sbjct: 358 IPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKM 417
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
N +++VHMLNAT CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK
Sbjct: 418 NAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKFQDE---IPFVKP 474
Query: 379 APID 382
APID
Sbjct: 475 APID 478
Score = 293 (108.2 bits), Expect = 5.0e-140, Sum P(3) = 5.0e-140
Identities = 57/84 (67%), Positives = 68/84 (80%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR++KGG+P+ VR+NQK RFK+V LV+ VI D +WRQ RH+ADN NK KN+C
Sbjct: 1 MVLDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVC 60
Query: 61 SKVIGEKMKAKEPVGD-SSTLPGN 83
SKVIGEKMK KEPVG S LP +
Sbjct: 61 SKVIGEKMKKKEPVGAMSEDLPAD 84
>MGI|MGI:102809 [details] [associations]
symbol:Sars "seryl-aminoacyl-tRNA synthetase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0004828 "serine-tRNA ligase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 MGI:MGI:102809 GO:GO:0005739 GO:GO:0005524
eggNOG:COG0172 EMBL:AL672200 HOGENOM:HOG000035937 GO:GO:0097056
SUPFAM:SSF46589 CTD:6301 GeneTree:ENSGT00660000095591
HOVERGEN:HBG023172 KO:K01875 OrthoDB:EOG4320Z0 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 ChiTaRS:SARS EMBL:AK075827 EMBL:BC008612
EMBL:M74012 IPI:IPI00469317 RefSeq:NP_001191908.1 UniGene:Mm.28688
ProteinModelPortal:P26638 SMR:P26638 STRING:P26638
PhosphoSite:P26638 REPRODUCTION-2DPAGE:P26638 PaxDb:P26638
PRIDE:P26638 Ensembl:ENSMUST00000090553 GeneID:20226 KEGG:mmu:20226
UCSC:uc008qzb.1 NextBio:297849 Bgee:P26638 CleanEx:MM_SARS
Genevestigator:P26638 GermOnline:ENSMUSG00000068739 Uniprot:P26638
Length = 512
Score = 601 (216.6 bits), Expect = 2.2e-133, Sum P(3) = 2.2e-133
Identities = 119/193 (61%), Positives = 143/193 (74%)
Query: 62 KVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLIT 120
K GE++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+
Sbjct: 116 KCDGERVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVV 175
Query: 121 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQ 180
M+DG + E GA+VAG RGYFLKGP V L+ L+QYAL +GYTP+YTPFFMRKEVMQ
Sbjct: 176 MVDGFEGEKGAVVAGSRGYFLKGPLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQ 235
Query: 181 EVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 240
EVAQL+QFDEELYKVIGKG + D + D+KYLIATSEQPI A+HRD WL LP
Sbjct: 236 EVAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLP 291
Query: 241 IRYLGVSTCFRQE 253
I+Y G+STCFRQE
Sbjct: 292 IKYAGLSTCFRQE 304
Score = 469 (170.2 bits), Expect = 2.2e-133, Sum P(3) = 2.2e-133
Identities = 90/124 (72%), Positives = 104/124 (83%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +Q E G+ +P+ LR+F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQAEKGIAVPEKLREFMPPG-LQEL--IPFVKP 473
Query: 379 APID 382
APID
Sbjct: 474 APID 477
Score = 273 (101.2 bits), Expect = 2.2e-133, Sum P(3) = 2.2e-133
Identities = 51/86 (59%), Positives = 66/86 (76%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLH 86
SK IGEKMK KE VGD ++P N L+
Sbjct: 61 SKTIGEKMKKKEAVGDDESVPENVLN 86
>RGD|628813 [details] [associations]
symbol:Sars "seryl-tRNA synthetase" species:10116 "Rattus
norvegicus" [GO:0004828 "serine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA] [GO:0097056
"selenocysteinyl-tRNA(Sec) biosynthetic process" evidence=IEA]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 RGD:628813 GO:GO:0005524 GO:GO:0005737
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
CTD:6301 GeneTree:ENSGT00660000095591 HOVERGEN:HBG023172 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 HSSP:Q9N0F3 EMBL:BC061765 EMBL:AY145052
IPI:IPI00391119 RefSeq:NP_001007607.1 UniGene:Rn.73067
ProteinModelPortal:Q6P799 IntAct:Q6P799 STRING:Q6P799 PRIDE:Q6P799
Ensembl:ENSRNOT00000033015 GeneID:266975 KEGG:rno:266975
UCSC:RGD:628813 NextBio:624745 ArrayExpress:Q6P799
Genevestigator:Q6P799 Uniprot:Q6P799
Length = 512
Score = 591 (213.1 bits), Expect = 1.2e-132, Sum P(3) = 1.2e-132
Identities = 121/194 (62%), Positives = 143/194 (73%)
Query: 62 KVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLIT 120
K GE++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+
Sbjct: 116 KCDGERVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVV 175
Query: 121 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQ 180
M+DG + E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQ
Sbjct: 176 MVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQ 235
Query: 181 EVAQLAQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASL 239
EVAQL+QFDEELYKVIGKG EK DS+ D+KYLIATSEQPI A+HRD WL L
Sbjct: 236 EVAQLSQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDL 290
Query: 240 PIRYLGVSTCFRQE 253
PI+Y G STCFRQE
Sbjct: 291 PIKYAGFSTCFRQE 304
Score = 472 (171.2 bits), Expect = 1.2e-132, Sum P(3) = 1.2e-132
Identities = 91/124 (73%), Positives = 105/124 (84%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLREFMPPG-LQEL--IPFVKP 473
Query: 379 APID 382
APID
Sbjct: 474 APID 477
Score = 273 (101.2 bits), Expect = 1.2e-132, Sum P(3) = 1.2e-132
Identities = 50/86 (58%), Positives = 67/86 (77%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLH 86
SK IGEKMK KEPVG+ ++P + L+
Sbjct: 61 SKTIGEKMKKKEPVGEDESIPEDVLN 86
>UNIPROTKB|Q6P799 [details] [associations]
symbol:Sars "Serine--tRNA ligase, cytoplasmic"
species:10116 "Rattus norvegicus" [GO:0006434 "seryl-tRNA
aminoacylation" evidence=IEA] UniPathway:UPA00906
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 RGD:628813
GO:GO:0005524 GO:GO:0005737 eggNOG:COG0172 HOGENOM:HOG000035937
GO:GO:0097056 SUPFAM:SSF46589 CTD:6301 GeneTree:ENSGT00660000095591
HOVERGEN:HBG023172 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HSSP:Q9N0F3
EMBL:BC061765 EMBL:AY145052 IPI:IPI00391119 RefSeq:NP_001007607.1
UniGene:Rn.73067 ProteinModelPortal:Q6P799 IntAct:Q6P799
STRING:Q6P799 PRIDE:Q6P799 Ensembl:ENSRNOT00000033015 GeneID:266975
KEGG:rno:266975 UCSC:RGD:628813 NextBio:624745 ArrayExpress:Q6P799
Genevestigator:Q6P799 Uniprot:Q6P799
Length = 512
Score = 591 (213.1 bits), Expect = 1.2e-132, Sum P(3) = 1.2e-132
Identities = 121/194 (62%), Positives = 143/194 (73%)
Query: 62 KVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLIT 120
K GE++K + ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+
Sbjct: 116 KCDGERVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVV 175
Query: 121 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQ 180
M+DG + E GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQ
Sbjct: 176 MVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQ 235
Query: 181 EVAQLAQFDEELYKVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASL 239
EVAQL+QFDEELYKVIGKG EK DS+ D+KYLIATSEQPI A+HRD WL L
Sbjct: 236 EVAQLSQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDL 290
Query: 240 PIRYLGVSTCFRQE 253
PI+Y G STCFRQE
Sbjct: 291 PIKYAGFSTCFRQE 304
Score = 472 (171.2 bits), Expect = 1.2e-132, Sum P(3) = 1.2e-132
Identities = 91/124 (73%), Positives = 105/124 (84%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLREFMPPG-LQEL--IPFVKP 473
Query: 379 APID 382
APID
Sbjct: 474 APID 477
Score = 273 (101.2 bits), Expect = 1.2e-132, Sum P(3) = 1.2e-132
Identities = 50/86 (58%), Positives = 67/86 (77%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLH 86
SK IGEKMK KEPVG+ ++P + L+
Sbjct: 61 SKTIGEKMKKKEPVGEDESIPEDVLN 86
>ZFIN|ZDB-GENE-040831-1 [details] [associations]
symbol:sars "seryl-tRNA synthetase" species:7955
"Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004828 "serine-tRNA ligase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0001525
"angiogenesis" evidence=IMP] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 ZFIN:ZDB-GENE-040831-1 GO:GO:0005524 GO:GO:0005737
GO:GO:0001569 EMBL:AL954678 eggNOG:COG0172 HOGENOM:HOG000035937
SUPFAM:SSF46589 CTD:6301 GeneTree:ENSGT00660000095591
HOVERGEN:HBG023172 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
EMBL:BC081608 EMBL:AY648839 EMBL:AB453157 IPI:IPI00632609
RefSeq:NP_001003882.1 UniGene:Dr.32657 STRING:Q6DRC0
Ensembl:ENSDART00000003296 GeneID:445405 KEGG:dre:445405
InParanoid:Q6DRC0 NextBio:20832109 Uniprot:Q6DRC0
Length = 515
Score = 570 (205.7 bits), Expect = 3.1e-132, Sum P(3) = 3.1e-132
Identities = 114/173 (65%), Positives = 130/173 (75%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + RT GD V+KKYSHVDL+ M+DG + E GAIVAG RGYF
Sbjct: 136 GNLLHPSVPISNDEDADNKVERTWGDCTVQKKYSHVDLVVMVDGYEGEKGAIVAGSRGYF 195
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKGP V L+ L+ YAL K Y LYTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 196 LKGPLVFLEQALINYALRILYSKNYNLLYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 255
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+ D + +D+KYLIATSEQPI A RD WL LPIRY G+STCFRQE
Sbjct: 256 EKSDD----NTVDEKYLIATSEQPIAAFLRDEWLKPEELPIRYAGLSTCFRQE 304
Score = 462 (167.7 bits), Expect = 3.1e-132, Sum P(3) = 3.1e-132
Identities = 95/139 (68%), Positives = 108/139 (77%)
Query: 244 LGVSTCFRQEDLTKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDY 303
+G + F Q T I YR+VNIVSGALNHAA+KKLDLEAWFPGS AFRELVSCSNC DY
Sbjct: 345 IGTAESFYQ---TLGIPYRIVNIVSGALNHAASKKLDLEAWFPGSQAFRELVSCSNCTDY 401
Query: 304 QSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVP 363
Q+RRL +RYGQTKKM +K EFVHMLNAT CATTRVICAILE QTE G+ +P+ L+ F+P
Sbjct: 402 QARRLRIRYGQTKKMMDKAEFVHMLNATMCATTRVICAILENFQTEEGIIVPEPLKAFMP 461
Query: 364 AVYVNEAGEIPFVKTAPID 382
+ E I FVK APID
Sbjct: 462 PG-LTEI--IKFVKPAPID 477
Score = 300 (110.7 bits), Expect = 3.1e-132, Sum P(3) = 3.1e-132
Identities = 56/81 (69%), Positives = 66/81 (81%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFRT+KGGDPE +R+ Q+ RFK+V LVDK+++ D +WR+ R ADN NK KNLC
Sbjct: 1 MVLDLDLFRTDKGGDPEIIRETQRKRFKDVSLVDKLVQADTEWRKCRFTADNLNKAKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLP 81
SK IGEKMK KEPVGD TLP
Sbjct: 61 SKSIGEKMKKKEPVGDDDTLP 81
>UNIPROTKB|E2R4D5 [details] [associations]
symbol:SARS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF46589
CTD:6301 GeneTree:ENSGT00660000095591 KO:K01875 OMA:KSIGEKM
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 EMBL:AAEX03004736 RefSeq:XP_866214.1
Ensembl:ENSCAFT00000031572 GeneID:490124 KEGG:cfa:490124
NextBio:20863218 Uniprot:E2R4D5
Length = 513
Score = 586 (211.3 bits), Expect = 1.0e-131, Sum P(3) = 1.0e-131
Identities = 114/173 (65%), Positives = 133/173 (76%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 135 GNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYF 194
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 195 LKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 254
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+ D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQE
Sbjct: 255 EKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQE 303
Score = 472 (171.2 bits), Expect = 1.0e-131, Sum P(3) = 1.0e-131
Identities = 93/132 (70%), Positives = 109/132 (82%)
Query: 253 EDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLV 310
ED +S I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +
Sbjct: 348 EDFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRI 407
Query: 311 RYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEA 370
RYGQTKKM +K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E
Sbjct: 408 RYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPPG-LQEL 466
Query: 371 GEIPFVKTAPID 382
IPFVK APID
Sbjct: 467 --IPFVKPAPID 476
Score = 269 (99.8 bits), Expect = 1.0e-131, Sum P(3) = 1.0e-131
Identities = 52/86 (60%), Positives = 66/86 (76%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD+++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVRADGEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLH 86
SK IGEKMK KEPVGD S +P + L+
Sbjct: 61 SKTIGEKMKKKEPVGDES-IPEDALN 85
>UNIPROTKB|P49591 [details] [associations]
symbol:SARS "Serine--tRNA ligase, cytoplasmic" species:9606
"Homo sapiens" [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0097056
"selenocysteinyl-tRNA(Sec) biosynthetic process" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=TAS] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0006412 "translation" evidence=TAS]
[GO:0004828 "serine-tRNA ligase activity" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006418 "tRNA aminoacylation for
protein translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 UniPathway:UPA00906 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 EMBL:CH471122 GO:GO:0003723 GO:GO:0008033
GO:GO:0006418 DrugBank:DB00133 eggNOG:COG0172 EMBL:AL356389
HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589 CTD:6301
HOVERGEN:HBG023172 KO:K01875 OrthoDB:EOG4320Z0 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 EMBL:X91257 EMBL:D49914 EMBL:AK312771
EMBL:BC000716 EMBL:BC009390 IPI:IPI00220637 PIR:G01026
RefSeq:NP_006504.2 UniGene:Hs.531176 PDB:3VBB PDBsum:3VBB
ProteinModelPortal:P49591 SMR:P49591 IntAct:P49591 STRING:P49591
PhosphoSite:P49591 DMDM:19860217 PaxDb:P49591 PRIDE:P49591
DNASU:6301 Ensembl:ENST00000234677 GeneID:6301 KEGG:hsa:6301
UCSC:uc001dwu.2 GeneCards:GC01P109756 HGNC:HGNC:10537 HPA:HPA016939
MIM:607529 neXtProt:NX_P49591 PharmGKB:PA34945 PhylomeDB:P49591
ChiTaRS:SARS GenomeRNAi:6301 NextBio:24463 PMAP-CutDB:P49591
ArrayExpress:P49591 Bgee:P49591 CleanEx:HS_SARS
Genevestigator:P49591 GermOnline:ENSG00000031698 Uniprot:P49591
Length = 514
Score = 580 (209.2 bits), Expect = 1.0e-131, Sum P(3) = 1.0e-131
Identities = 113/173 (65%), Positives = 132/173 (76%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 136 GNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYF 195
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 196 LKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 255
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+ D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQE
Sbjct: 256 EKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQE 304
Score = 467 (169.5 bits), Expect = 1.0e-131, Sum P(3) = 1.0e-131
Identities = 89/124 (71%), Positives = 105/124 (84%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPG-LQEL--IPFVKP 473
Query: 379 APID 382
API+
Sbjct: 474 APIE 477
Score = 280 (103.6 bits), Expect = 1.0e-131, Sum P(3) = 1.0e-131
Identities = 52/85 (61%), Positives = 66/85 (77%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHL 85
SK IGEKMK KEPVGD ++P N L
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVL 85
>UNIPROTKB|Q5T5C7 [details] [associations]
symbol:SARS "Serine--tRNA ligase, cytoplasmic" species:9606
"Homo sapiens" [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006434
"seryl-tRNA aminoacylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737 EMBL:AL356389
HOGENOM:HOG000035937 SUPFAM:SSF46589 HOVERGEN:HBG023172
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 OMA:EESWEWH UniGene:Hs.531176 HGNC:HGNC:10537
ChiTaRS:SARS IPI:IPI00514587 SMR:Q5T5C7 STRING:Q5T5C7
Ensembl:ENST00000369923 Uniprot:Q5T5C7
Length = 536
Score = 580 (209.2 bits), Expect = 3.4e-131, Sum P(4) = 3.4e-131
Identities = 113/173 (65%), Positives = 132/173 (76%)
Query: 82 GNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E GA+VAG RGYF
Sbjct: 136 GNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYF 195
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L+ L+QYAL +GY P+YTPFFMRKEVMQEVAQL+QFDEELYKVIGKG
Sbjct: 196 LKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGS 255
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+ D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQE
Sbjct: 256 EKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQE 304
Score = 283 (104.7 bits), Expect = 3.4e-131, Sum P(4) = 3.4e-131
Identities = 52/63 (82%), Positives = 58/63 (92%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEK 321
+K
Sbjct: 417 MDK 419
Score = 280 (103.6 bits), Expect = 3.4e-131, Sum P(4) = 3.4e-131
Identities = 52/85 (61%), Positives = 66/85 (77%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R+ Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHL 85
SK IGEKMK KEPVGD ++P N L
Sbjct: 61 SKTIGEKMKKKEPVGDDESVPENVL 85
Score = 190 (71.9 bits), Expect = 3.4e-131, Sum P(4) = 3.4e-131
Identities = 38/63 (60%), Positives = 49/63 (77%)
Query: 320 EKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTA 379
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK A
Sbjct: 440 KKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPG-LQEL--IPFVKPA 496
Query: 380 PID 382
PI+
Sbjct: 497 PIE 499
>WB|WBGene00005663 [details] [associations]
symbol:sars-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005524 GO:GO:0009792 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 EMBL:Z68882 eggNOG:COG0172 HOGENOM:HOG000035937
GO:GO:0097056 SUPFAM:SSF46589 GeneTree:ENSGT00660000095591
KO:K01875 OMA:KSIGEKM GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 PIR:T20008
RefSeq:NP_501804.1 ProteinModelPortal:Q18678 SMR:Q18678
IntAct:Q18678 STRING:Q18678 PaxDb:Q18678 PRIDE:Q18678
EnsemblMetazoa:C47E12.1.1 EnsemblMetazoa:C47E12.1.2 GeneID:177859
KEGG:cel:CELE_C47E12.1 UCSC:C47E12.1.1 CTD:177859 WormBase:C47E12.1
InParanoid:Q18678 NextBio:898694 Uniprot:Q18678
Length = 487
Score = 560 (202.2 bits), Expect = 2.2e-125, Sum P(3) = 2.2e-125
Identities = 109/173 (63%), Positives = 130/173 (75%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFL 141
GN +H SV VS +E N I RT GD +KKYSHVDL+ M+DG D E G +VAGGRGYFL
Sbjct: 137 GNLIHSSVVVSKDEANNKIERTFGDLSTKKKYSHVDLVVMVDGFDGERGTVVAGGRGYFL 196
Query: 142 KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
KGP V L+ ++Q AL + KGY PLYTPFFMRKEVMQEVAQL+QFD+ELYKV KG +
Sbjct: 197 KGPLVFLEQAIIQLALQRLNVKGYVPLYTPFFMRKEVMQEVAQLSQFDDELYKVSSKGSE 256
Query: 202 V-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+ GD++ +D+KYLIATSEQPI A HR+ W+ E LPI+Y GVSTCFRQE
Sbjct: 257 IAGDTS-----VDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVSTCFRQE 304
Score = 455 (165.2 bits), Expect = 2.2e-125, Sum P(3) = 2.2e-125
Identities = 95/159 (59%), Positives = 118/159 (74%)
Query: 225 ICAVH-RDSWLPEASLPIRYLGVSTCFRQEDLTKSIAYRVVNIVSGALNHAAAKKLDLEA 283
+C+ + +SW +L +G + + QE I Y+VVNIVSG LN+AAAKK DLEA
Sbjct: 329 LCSPNDNESW----TLFDEMIGNAESYYQE---LQIPYQVVNIVSGELNNAAAKKFDLEA 381
Query: 284 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
WFPGSGA+RELVSCSNCLDYQSRRL VRYGQTKK++ ++ FVHMLNAT CATTRVICAIL
Sbjct: 382 WFPGSGAYRELVSCSNCLDYQSRRLKVRYGQTKKLSGEVPFVHMLNATMCATTRVICAIL 441
Query: 344 ETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
E +QTE G+ +P +++++P Y IPFVK APID
Sbjct: 442 ENNQTEEGINVPTAIQQWMPENYRTF---IPFVKPAPID 477
Score = 252 (93.8 bits), Expect = 2.2e-125, Sum P(3) = 2.2e-125
Identities = 51/79 (64%), Positives = 62/79 (78%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD+D+FRTEKGG+PE +RK+Q+DRFK+ +LVD+VIE D KWR+ R AD N+ KN
Sbjct: 1 MVLDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVADQLNRQKNAI 60
Query: 61 SKVIGEKMKAKEPVG-DSS 78
SK IGEKMK KEP G D S
Sbjct: 61 SKAIGEKMKKKEPQGTDDS 79
>UNIPROTKB|F1S5Z3 [details] [associations]
symbol:SARS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006434
"seryl-tRNA aminoacylation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF46589
CTD:6301 GeneTree:ENSGT00660000095591 KO:K01875 OMA:KSIGEKM
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 EMBL:CU207229 RefSeq:XP_001925705.3
UniGene:Ssc.9404 Ensembl:ENSSSCT00000007486 GeneID:100155484
KEGG:ssc:100155484 Uniprot:F1S5Z3
Length = 514
Score = 585 (211.0 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 129/245 (52%), Positives = 163/245 (66%)
Query: 17 EKVRKNQKDRFKNVE-LVDKVIE-NDLKWRQFRH-KADNFNKFKNLCSKVI----GEKMK 69
EK++K K+ N E L + V+ +DL + K K + L + I E++K
Sbjct: 66 EKMKK--KEAVGNDESLPEDVLNLDDLTADTLTNLKVAQIKKVRLLIDEAILKCDAERIK 123
Query: 70 AKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSE 128
+ ++ GN LHPSVP+SN+ED +N + R GD VRKKYSHVDL+ M+DG + E
Sbjct: 124 LEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCSVRKKYSHVDLVVMVDGFEGE 183
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
GA+VAG RGYFLKG V L+ L+QYAL +GYTP+YTPFFMRKEVMQEVAQL+QF
Sbjct: 184 KGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQF 243
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
DEELYKVIGKG + D + ++KYLIATSEQPI A+HRD WL LPI+Y G+ST
Sbjct: 244 DEELYKVIGKGSEKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLST 299
Query: 249 CFRQE 253
CFRQE
Sbjct: 300 CFRQE 304
Score = 469 (170.2 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 90/124 (72%), Positives = 105/124 (84%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPPG-LQEL--IPFVKP 473
Query: 379 APID 382
APID
Sbjct: 474 APID 477
Score = 264 (98.0 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 49/86 (56%), Positives = 67/86 (77%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R++Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLH 86
S+ IGEKMK KE VG+ +LP + L+
Sbjct: 61 SRTIGEKMKKKEAVGNDESLPEDVLN 86
>UNIPROTKB|Q9GMB8 [details] [associations]
symbol:SARS "Serine--tRNA ligase, cytoplasmic" species:9913
"Bos taurus" [GO:0097056 "selenocysteinyl-tRNA(Sec) biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004828 "serine-tRNA ligase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] UniPathway:UPA00906 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005739 GO:GO:0005524
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
EMBL:AF297553 IPI:IPI00705229 RefSeq:NP_776600.1 UniGene:Bt.1552
ProteinModelPortal:Q9GMB8 STRING:Q9GMB8 PRIDE:Q9GMB8
Ensembl:ENSBTAT00000017232 GeneID:281476 KEGG:bta:281476 CTD:6301
GeneTree:ENSGT00660000095591 HOVERGEN:HBG023172 InParanoid:Q9GMB8
KO:K01875 OMA:KSIGEKM OrthoDB:EOG4320Z0 NextBio:20805452
ArrayExpress:Q9GMB8 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 TIGRFAMs:TIGR00414 Uniprot:Q9GMB8
Length = 514
Score = 583 (210.3 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 127/245 (51%), Positives = 162/245 (66%)
Query: 17 EKVRKNQKDRFKNVELVDKVIEN--DLKWRQFRH-KADNFNKFKNLCSKVI----GEKMK 69
EK++K K+ N E + + + N DL + K K + L + I E++K
Sbjct: 66 EKMKK--KEPVGNDESIPEDVLNLDDLTADTLTNLKVSQIKKVRLLVDEAILKCDAERIK 123
Query: 70 AKEPVGDSSTLPGNHLHPSVPVSNNED-ENGIVRTKGDTEVRKKYSHVDLITMIDGVDSE 128
+ +S GN LHPSVP+S++ED +N + R GD VRKKYSHVDL+ M+DG + E
Sbjct: 124 LEAERFESLREIGNLLHPSVPISDDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGFEGE 183
Query: 129 AGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQF 188
GA+VAG RGYFLKG V L+ L+Q+AL +GYTP+YTPFFMRKEVMQEVAQL+QF
Sbjct: 184 KGAVVAGSRGYFLKGVLVFLEQALIQFALRTLASRGYTPIYTPFFMRKEVMQEVAQLSQF 243
Query: 189 DEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 248
DEELYKVIGKG + D + ++KYLIATSEQPI A+HRD WL LPI+Y G+ST
Sbjct: 244 DEELYKVIGKGSEKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLST 299
Query: 249 CFRQE 253
CFRQE
Sbjct: 300 CFRQE 304
Score = 471 (170.9 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 90/124 (72%), Positives = 105/124 (84%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTKKM
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
+K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQTEKGILVPEKLKEFMPPG-LQEL--IPFVKA 473
Query: 379 APID 382
APID
Sbjct: 474 APID 477
Score = 273 (101.2 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 50/86 (58%), Positives = 68/86 (79%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLDLDLFR +KGGDP +R++Q+ RFK+ LVD++++ D +WR+ R +ADN NK KNLC
Sbjct: 1 MVLDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLH 86
SK IGEKMK KEPVG+ ++P + L+
Sbjct: 61 SKTIGEKMKKKEPVGNDESIPEDVLN 86
>DICTYBASE|DDB_G0272660 [details] [associations]
symbol:serS "seryl-tRNA synthetase" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA;ISS] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004828 "serine-tRNA ligase activity" evidence=IEA;ISS]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0097056 "selenocysteinyl-tRNA(Sec) biosynthetic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 dictyBase:DDB_G0272660 GO:GO:0005524 GO:GO:0045335
GenomeReviews:CM000151_GR EMBL:AAFI02000008 eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
RefSeq:XP_644993.1 HSSP:Q9N0F3 ProteinModelPortal:Q7KWQ2
STRING:Q7KWQ2 PRIDE:Q7KWQ2 EnsemblProtists:DDB0231305
GeneID:8618670 KEGG:ddi:DDB_G0272660 OMA:EESWEWH
ProtClustDB:CLSZ2496096 Uniprot:Q7KWQ2
Length = 451
Score = 411 (149.7 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 85/173 (49%), Positives = 110/173 (63%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGDTEVRKKY-SHVDLITMIDGVDSEAGAIVAGGRGYF 140
GN +H SVP+ NNED N I++T G+ + + H +L+ MIDG D E G +V+G R YF
Sbjct: 110 GNIVHESVPIDNNEDNNQIIKTWGECKTSEGLLHHHELLEMIDGYDPERGTLVSGHRCYF 169
Query: 141 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGE 200
LKG V L ++ +AL ++G PL TPFFM K+VM + AQL QFD+ELYKV G E
Sbjct: 170 LKGIGVLLNQAIINFALMHMTKRGSVPLQTPFFMNKDVMAKTAQLEQFDDELYKVTGDNE 229
Query: 201 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+KYLIATSEQPI A H+D W+ E LP +Y+G STCFR+E
Sbjct: 230 -------------EKYLIATSEQPISAFHQDEWIEEKDLPKKYVGYSTCFRKE 269
Score = 353 (129.3 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 72/122 (59%), Positives = 88/122 (72%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YRVVNIVSGALN+AA+KK DLE WFPG +RELVSCSNC DYQSR L +R G K+
Sbjct: 320 IPYRVVNIVSGALNNAASKKYDLEGWFPGYNQYRELVSCSNCTDYQSRDLEIRCGMKKQG 379
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 378
++ ++VHMLN+T ATTRVIC ILE +QTE G+ +P LR ++ + IPFVK
Sbjct: 380 QQQKKYVHMLNSTLAATTRVICCILENYQTEGGITVPVPLRPYLGKDF------IPFVKA 433
Query: 379 AP 380
AP
Sbjct: 434 AP 435
Score = 134 (52.2 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
M LD+ LFR +KGG+P+ +R++QK R+ NV+ V +VI+ D ++ +++ DN N
Sbjct: 1 MGLDIVLFRADKGGNPDLIRQSQKVRYANVDAVQEVIDLDKVVKETKYRLDNTNAEYAKL 60
Query: 61 SKVIGEKMKAKEPVGDSSTLPGNHLHPSV 89
+K + K KA E D L+ S+
Sbjct: 61 NKSVAMKKKAGESA-DEIIAQAEELNQSI 88
>TAIR|locus:2146400 [details] [associations]
symbol:AT5G27470 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0004828
"serine-tRNA ligase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=ISS;IDA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005829 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046686 EMBL:AC007123
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
KO:K01875 OMA:KSIGEKM GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 EMBL:Z70313
EMBL:AF360352 EMBL:AY051054 IPI:IPI00523287 PIR:S71293
RefSeq:NP_198099.1 UniGene:At.24387 ProteinModelPortal:Q39230
SMR:Q39230 STRING:Q39230 PaxDb:Q39230 PRIDE:Q39230 DNASU:832806
EnsemblPlants:AT5G27470.1 GeneID:832806 KEGG:ath:AT5G27470
GeneFarm:2446 TAIR:At5g27470 InParanoid:Q39230 PhylomeDB:Q39230
ProtClustDB:PLN02678 Genevestigator:Q39230 GermOnline:AT5G27470
Uniprot:Q39230
Length = 451
Score = 391 (142.7 bits), Expect = 4.6e-86, Sum P(3) = 4.6e-86
Identities = 82/176 (46%), Positives = 112/176 (63%)
Query: 82 GNHLHPSVPVSNNEDENGIVRTKGD----TEVRKKYSHVDLITMIDGVDSEAGAIVAGGR 137
GN +H SVPV +E N +++ G+ T K +HVDL+ ++ D++ GA +AG R
Sbjct: 109 GNLVHDSVPVDKDEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGAR 168
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
G+FLKG + L L+ + L+ ++G+T L PFFMRK+VM + AQLAQFDEELYKV G
Sbjct: 169 GFFLKGDGLMLNQALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTG 228
Query: 198 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+G DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E
Sbjct: 229 EG-------------DDKYLIATAEQPLCAYHIDEWIHPTELPLRYAGYSSCFRKE 271
Score = 343 (125.8 bits), Expect = 4.6e-86, Sum P(3) = 4.6e-86
Identities = 68/105 (64%), Positives = 82/105 (78%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
+ Y++V+IVSGALN AAAKK DLEAWFP S FRELVSCSNC DYQ+RRL +RYGQ KK
Sbjct: 324 LPYQIVSIVSGALNDAAAKKYDLEAWFPSSETFRELVSCSNCTDYQARRLEIRYGQ-KKS 382
Query: 319 NEKI-EFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFV 362
NE+ ++VHMLN+T AT R IC ILE +Q E GV IP+ L+ F+
Sbjct: 383 NEQTKQYVHMLNSTLTATERTICCILENYQREDGVDIPEVLQPFM 427
Score = 159 (61.0 bits), Expect = 4.6e-86, Sum P(3) = 4.6e-86
Identities = 30/72 (41%), Positives = 53/72 (73%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LFR EKG +PE +R++Q+ RF +VE+VD++I+ D +WRQ + + D+F K N +
Sbjct: 1 MLDINLFREEKGNNPEIIRESQRRRFASVEIVDEIIKLDKEWRQRQFEVDSFRKEFNKLN 60
Query: 62 KVIGE-KMKAKE 72
K + + K+K ++
Sbjct: 61 KQVAQLKIKKED 72
>POMBASE|SPAC29A4.15 [details] [associations]
symbol:SPAC29A4.15 "cytoplasmic serine-tRNA ligase Srs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 PomBase:SPAC29A4.15 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0002181 eggNOG:COG0172
HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 OMA:EESWEWH PIR:T38474 RefSeq:NP_594867.1
ProteinModelPortal:O14018 STRING:O14018 PRIDE:O14018
EnsemblFungi:SPAC29A4.15.1 GeneID:2542163 KEGG:spo:SPAC29A4.15
OrthoDB:EOG425922 NextBio:20803235 Uniprot:O14018
Length = 450
Score = 360 (131.8 bits), Expect = 1.7e-82, Sum P(3) = 1.7e-82
Identities = 89/203 (43%), Positives = 118/203 (58%)
Query: 57 KNLCSKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRT---KGDTEVRKK- 112
KNL + E K KE + S++ GN +H SVPVS +ED N I+R +G T +K
Sbjct: 88 KNLIEQ---ETAKNKEMLNVVSSI-GNIVHDSVPVSMDEDNNEIIRKWAPEGVTVEKKNC 143
Query: 113 YSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPF 172
SH +++T +DG D E G V+G RGYFL+ V + L+QY L ++GY L P
Sbjct: 144 LSHHEVLTRLDGYDPERGVKVSGHRGYFLRQYGVFFNLALIQYGLDFLEKRGYIALQAPT 203
Query: 173 FMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDS 232
+ K+VM + AQL QFDEELYKVI GD +++YLIATSEQPI A H
Sbjct: 204 MLNKDVMAKTAQLEQFDEELYKVID-----GD--------EERYLIATSEQPISAYHSGE 250
Query: 233 WL--PEASLPIRYLGVSTCFRQE 253
W P LP++Y G STC+R+E
Sbjct: 251 WFEKPSEQLPLKYAGYSTCYRRE 273
Score = 328 (120.5 bits), Expect = 1.7e-82, Sum P(3) = 1.7e-82
Identities = 71/131 (54%), Positives = 88/131 (67%)
Query: 253 EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLV 310
ED KS+ YR+V IVSGALN+AAAKK DLEAWFP G ++ELVSCSNC DYQSR L +
Sbjct: 316 EDFYKSLELPYRIVAIVSGALNNAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQSRNLEI 375
Query: 311 RYGQTKKMNEKIE-FVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNE 369
R G KKM ++ + +VH LN+T CAT R +C ILE +QT GV +P L+ P Y+
Sbjct: 376 RCG-VKKMGDREKKYVHCLNSTLCATERALCCILENYQTPDGVNVPKVLQ---P--YMGG 429
Query: 370 AGEIPFVKTAP 380
+PF K P
Sbjct: 430 KTFLPFTKELP 440
Score = 171 (65.3 bits), Expect = 1.7e-82, Sum P(3) = 1.7e-82
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++LF+ EKGG+PE +R++Q+ R +V +VDKVIE +W R + DN NK N
Sbjct: 1 MLDINLFQVEKGGNPEIIRESQRKRGADVGVVDKVIEMYKEWVSLRFELDNTNKSINRVQ 60
Query: 62 KVIGEKMKAKEPVGD 76
K IG KMKAKE +
Sbjct: 61 KEIGLKMKAKEDASE 75
>ASPGD|ASPL0000077121 [details] [associations]
symbol:AN8867 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA]
[GO:0004828 "serine-tRNA ligase activity" evidence=IEA]
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005737 EMBL:BN001303 EMBL:AACD01000163 eggNOG:COG0172
HOGENOM:HOG000035937 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 OMA:EESWEWH OrthoDB:EOG425922 RefSeq:XP_682136.1
ProteinModelPortal:Q5AS63 STRING:Q5AS63
EnsemblFungi:CADANIAT00006181 GeneID:2868363 KEGG:ani:AN8867.2
Uniprot:Q5AS63
Length = 474
Score = 387 (141.3 bits), Expect = 2.2e-80, Sum P(3) = 2.2e-80
Identities = 86/188 (45%), Positives = 112/188 (59%)
Query: 71 KEPVGDSSTLP-GNHLHPSVPVSNNEDENGIVRT---KGDTEVRKK-YSHVDLITMIDGV 125
KE + D GN++H SVPVSNNED+N ++RT +G + SH +++T +DG
Sbjct: 97 KEDLRDKKIRTIGNYVHDSVPVSNNEDDNSVIRTWFPEGFVAEKPNCLSHHEVLTRLDGY 156
Query: 126 DSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQL 185
D E G V G RGY L G + L + LV Y L ++GY P P FM +E+M + AQL
Sbjct: 157 DPERGVKVVGHRGYCLTGYGLFLNLALVNYGLEFLWKRGYKPNQPPHFMLREMMAKTAQL 216
Query: 186 AQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 245
QFDEELYKV +D+ DKYLIATSEQP+ A+H WL + LPIRY G
Sbjct: 217 EQFDEELYKV----------TESEDKSTDKYLIATSEQPLSALHDSEWLQDKDLPIRYAG 266
Query: 246 VSTCFRQE 253
STC+R+E
Sbjct: 267 YSTCYRKE 274
Score = 346 (126.9 bits), Expect = 2.2e-80, Sum P(3) = 2.2e-80
Identities = 71/133 (53%), Positives = 91/133 (68%)
Query: 253 EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLV 310
E+ KS+ Y+VV+IVSGALN+AAAKK DLEAWFP ++ELVSCSNC DYQ+R L +
Sbjct: 317 EEFYKSLGLPYQVVSIVSGALNNAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQARALGI 376
Query: 311 RYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEA 370
RYG K + K +VH LNAT CAT R +C +LE +QTE G +P+ LRK++P A
Sbjct: 377 RYGPKKTTDAKKSYVHALNATLCATERTLCCVLENYQTEDGFIVPEPLRKYIPG-----A 431
Query: 371 GE-IPFVKTAPID 382
E +P+ K P D
Sbjct: 432 PEFLPYTKELPKD 444
Score = 106 (42.4 bits), Expect = 2.2e-80, Sum P(3) = 2.2e-80
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LDL F T++GGDP K++++Q+ R VD+VI + R+ R++ N N
Sbjct: 1 MLDLADFITDRGGDPNKIKESQRRRSAPEAAVDEVITLYEEARKARYEVSQINSKLNGLL 60
Query: 62 KVIGEKMKAKE 72
+ IG+K K KE
Sbjct: 61 REIGKKKKNKE 71
>CGD|CAL0004049 [details] [associations]
symbol:SES1 species:5476 "Candida albicans" [GO:0004828
"serine-tRNA ligase activity" evidence=IGI;ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 CGD:CAL0004049 GO:GO:0005524 GO:GO:0005737
EMBL:AACQ01000027 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 RefSeq:XP_719967.1 ProteinModelPortal:Q5AEJ9
STRING:Q5AEJ9 GeneID:3638415 KEGG:cal:CaO19.269 Uniprot:Q5AEJ9
Length = 458
Score = 355 (130.0 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 95/251 (37%), Positives = 127/251 (50%)
Query: 18 KVRKNQKDRFKNVELVDKVIENDLKWRQ-FRHKADNFNKFKNLCSKVIGEKMKAKEPVGD 76
K+R + + K + V K I K ++ + K N ++I ++ +A + +
Sbjct: 40 KLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRS 99
Query: 77 SSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRK------------KYSHVDLITMIDG 124
GN +H SV S +E+ N +VRT +K K SH +++ +DG
Sbjct: 100 KINQVGNIVHESVVDSQDEENNELVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDG 159
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
D E G + G RGYFL+ V L L+ Y LS KGY PL P M KEVM + AQ
Sbjct: 160 YDPERGVRIVGHRGYFLRNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQ 219
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIR 242
L+QFDEELYKVI GE D+KYLIATSEQPI A H W P LP+R
Sbjct: 220 LSQFDEELYKVID-GE------------DEKYLIATSEQPISAYHAGEWFESPAEQLPVR 266
Query: 243 YLGVSTCFRQE 253
Y G S+CFR+E
Sbjct: 267 YAGYSSCFRRE 277
Score = 329 (120.9 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 70/139 (50%), Positives = 91/139 (65%)
Query: 242 RYLGVSTCFRQEDLTKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCL 301
R +G S F Q + + YRVV IVSG LN+AAAKK DLEAWFP ++ELVSCSNC
Sbjct: 314 RMIGCSEEFYQ---SLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQQEYKELVSCSNCT 370
Query: 302 DYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKF 361
DYQSR L +R G ++ ++ ++VH LN+T AT R IC ILE +Q E G+ IP+ LRK+
Sbjct: 371 DYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTICCILENYQKEDGLVIPEVLRKY 430
Query: 362 VPAVYVNEAGEIPFVKTAP 380
+P E IP++K P
Sbjct: 431 IPG----EPEFIPYIKELP 445
Score = 149 (57.5 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 8 FRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEK 67
F ++GGDPE ++ +QK R +VELVD++I +W + R D NK N K IG++
Sbjct: 3 FSLKRGGDPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKR 62
Query: 68 MKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLI---TMIDG 124
KAKE D+ L + +SN + E + D +R K + V I +++D
Sbjct: 63 FKAKE---DAKDL----IAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESVVDS 115
Query: 125 VDSEAGAIV 133
D E +V
Sbjct: 116 QDEENNELV 124
>UNIPROTKB|Q5AEJ9 [details] [associations]
symbol:SES1 "Potential serine tRNA synthetase"
species:237561 "Candida albicans SC5314" [GO:0004828 "serine-tRNA
ligase activity" evidence=IGI;ISS] InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 CGD:CAL0004049 GO:GO:0005524
GO:GO:0005737 EMBL:AACQ01000027 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 RefSeq:XP_719967.1 ProteinModelPortal:Q5AEJ9
STRING:Q5AEJ9 GeneID:3638415 KEGG:cal:CaO19.269 Uniprot:Q5AEJ9
Length = 458
Score = 355 (130.0 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 95/251 (37%), Positives = 127/251 (50%)
Query: 18 KVRKNQKDRFKNVELVDKVIENDLKWRQ-FRHKADNFNKFKNLCSKVIGEKMKAKEPVGD 76
K+R + + K + V K I K ++ + K N ++I ++ +A + +
Sbjct: 40 KLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRS 99
Query: 77 SSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRK------------KYSHVDLITMIDG 124
GN +H SV S +E+ N +VRT +K K SH +++ +DG
Sbjct: 100 KINQVGNIVHESVVDSQDEENNELVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDG 159
Query: 125 VDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 184
D E G + G RGYFL+ V L L+ Y LS KGY PL P M KEVM + AQ
Sbjct: 160 YDPERGVRIVGHRGYFLRNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQ 219
Query: 185 LAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIR 242
L+QFDEELYKVI GE D+KYLIATSEQPI A H W P LP+R
Sbjct: 220 LSQFDEELYKVID-GE------------DEKYLIATSEQPISAYHAGEWFESPAEQLPVR 266
Query: 243 YLGVSTCFRQE 253
Y G S+CFR+E
Sbjct: 267 YAGYSSCFRRE 277
Score = 329 (120.9 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 70/139 (50%), Positives = 91/139 (65%)
Query: 242 RYLGVSTCFRQEDLTKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCL 301
R +G S F Q + + YRVV IVSG LN+AAAKK DLEAWFP ++ELVSCSNC
Sbjct: 314 RMIGCSEEFYQ---SLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQQEYKELVSCSNCT 370
Query: 302 DYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKF 361
DYQSR L +R G ++ ++ ++VH LN+T AT R IC ILE +Q E G+ IP+ LRK+
Sbjct: 371 DYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTICCILENYQKEDGLVIPEVLRKY 430
Query: 362 VPAVYVNEAGEIPFVKTAP 380
+P E IP++K P
Sbjct: 431 IPG----EPEFIPYIKELP 445
Score = 149 (57.5 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 8 FRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEK 67
F ++GGDPE ++ +QK R +VELVD++I +W + R D NK N K IG++
Sbjct: 3 FSLKRGGDPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKR 62
Query: 68 MKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLI---TMIDG 124
KAKE D+ L + +SN + E + D +R K + V I +++D
Sbjct: 63 FKAKE---DAKDL----IAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESVVDS 115
Query: 125 VDSEAGAIV 133
D E +V
Sbjct: 116 QDEENNELV 124
>SGD|S000002430 [details] [associations]
symbol:SES1 "Cytosolic seryl-tRNA synthetase" species:4932
"Saccharomyces cerevisiae" [GO:0097056 "selenocysteinyl-tRNA(Sec)
biosynthetic process" evidence=IEA] [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA;IDA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 SGD:S000002430 GO:GO:0005524 GO:GO:0005737
EMBL:BK006938 EMBL:X95966 eggNOG:COG0172 HOGENOM:HOG000035937
GO:GO:0097056 EMBL:Z47814 EMBL:L15408 SUPFAM:SSF46589
GeneTree:ENSGT00660000095591 KO:K01875 OMA:KSIGEKM GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 OrthoDB:EOG425922 EMBL:X04884 EMBL:Z74319
PIR:S50930 RefSeq:NP_010306.1 ProteinModelPortal:P07284 SMR:P07284
DIP:DIP-5181N IntAct:P07284 MINT:MINT-513156 STRING:P07284
PaxDb:P07284 PeptideAtlas:P07284 PRIDE:P07284 EnsemblFungi:YDR023W
GeneID:851587 KEGG:sce:YDR023W CYGD:YDR023w NextBio:969063
Genevestigator:P07284 GermOnline:YDR023W Uniprot:P07284
Length = 462
Score = 345 (126.5 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 101/254 (39%), Positives = 128/254 (50%)
Query: 17 EKVRKNQKD---RFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEP 73
+K K QKD +FKN E ++ K Q + K L K E K+
Sbjct: 54 KKFNKLQKDIGLKFKNKEDASGLLAEKEKLTQQK---------KELTEKEQQEDKDLKKK 104
Query: 74 VGDSSTLPGNHLHPSVPVSNNEDENGIVRT--KGDTE-------VRKK---YSHVDLITM 121
V GN +HPSV VSN+E+ N +VRT D E V K SH +++
Sbjct: 105 VFQV----GNIVHPSVVVSNDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLR 160
Query: 122 IDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE 181
+DG D + G + G RGYF + V L L+ Y L KGY PL P M KE+M +
Sbjct: 161 LDGYDPDRGVKICGHRGYFFRNYGVFLNQALINYGLQFLAAKGYIPLQAPVMMNKELMSK 220
Query: 182 VAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASL 239
AQL++FDEELYKVI GE D+KYLIATSEQPI A H W P+ L
Sbjct: 221 TAQLSEFDEELYKVID-GE------------DEKYLIATSEQPISAYHSGEWFEKPQEQL 267
Query: 240 PIRYLGVSTCFRQE 253
PI Y+G S+CFR+E
Sbjct: 268 PIHYVGYSSCFRRE 281
Score = 328 (120.5 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 69/131 (52%), Positives = 89/131 (67%)
Query: 253 EDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLV 310
E+ KS+ YR+V IVSG LN+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +
Sbjct: 324 EEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEI 383
Query: 311 RYGQTKKMNEKIE-FVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNE 369
R G KKM ++ + +VH LN+T AT R +C ILE +QTE G+ +P+ LRK++P E
Sbjct: 384 RCG-IKKMGDREKKYVHCLNSTLAATQRALCCILENYQTEDGLVVPEVLRKYIPG----E 438
Query: 370 AGEIPFVKTAP 380
+PFV P
Sbjct: 439 PEFLPFVNELP 449
Score = 140 (54.3 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD++ F +KGG+PE +R++QK R +VE+VD++I + W + R + D NK N
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60
Query: 62 KVIGEKMKAKE 72
K IG K K KE
Sbjct: 61 KDIGLKFKNKE 71
>GENEDB_PFALCIPARUM|PF07_0073 [details] [associations]
symbol:PF07_0073 "seryl-tRNA synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005524 EMBL:AL844506 GO:GO:0020011
HOGENOM:HOG000035937 SUPFAM:SSF46589 KO:K01875 OMA:KSIGEKM
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
ProtClustDB:CLSZ2496096 RefSeq:XP_001349080.1 HSSP:P34945
ProteinModelPortal:Q8IBS3 IntAct:Q8IBS3 MINT:MINT-1573722
PRIDE:Q8IBS3 EnsemblProtists:PF07_0073:mRNA GeneID:2655117
KEGG:pfa:PF07_0073 EuPathDB:PlasmoDB:PF3D7_0717700 Uniprot:Q8IBS3
Length = 539
Score = 245 (91.3 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 65/196 (33%), Positives = 99/196 (50%)
Query: 9 RTEKGGDPEKVRK---NQKDRFKNVELVDKVIENDLKWR-QFRHKADNFNKFKNLCSKVI 64
+ +K D E ++K N K+ +L +K + LK R ++ K N K +CS
Sbjct: 69 KVDKNADVEDLKKKSLNIKEEIPKYQLKEKEL---LKERNKYISKIGNLLNIKVVCSDN- 124
Query: 65 GEKMKAKEPVGDSSTLPG-----NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLI 119
+ K + G+ LP N +H +V SNN + + + K Y H DL+
Sbjct: 125 EDNNKIVKTWGECKILPACEENDNSIHDNVVNSNNIKRETLNNEVDNKKKIKYYYHYDLL 184
Query: 120 TMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVM 179
I G + + G VAG RGY+L G L ++QYAL+ + K Y P+Y PFFM+K +M
Sbjct: 185 RKIGGANFKKGIQVAGHRGYYLTGAGFLLHNAILQYALNFLVNKKYIPVYPPFFMKKNIM 244
Query: 180 QEVAQLAQFDEELYKV 195
+E A+L F+E LYK+
Sbjct: 245 EECAELDDFEETLYKI 260
Score = 199 (75.1 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 46/90 (51%), Positives = 60/90 (66%)
Query: 234 LPEASLPIRYLGVSTCFRQEDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAF 291
LP+ S I + TC E+ +S I YR+V+IVSGALN+AA+ K DLE +FP S +
Sbjct: 376 LPQHSNKIHEEMIQTC---EEFYQSLNIPYRIVSIVSGALNNAASIKYDLEGFFPTSNQY 432
Query: 292 RELVSCSNCLDYQSRRLLVRYGQTK-KMNE 320
RELVSCSNC DYQS L +RY + K+N+
Sbjct: 433 RELVSCSNCTDYQSINLNIRYSDSSIKIND 462
Score = 161 (61.7 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 31/69 (44%), Positives = 48/69 (69%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFR EKGG+P+K++++++ R+ + VDKVIE D KWR+ + + K N+
Sbjct: 1 MVLDINLFRKEKGGNPDKIKESERKRYHDENNVDKVIEYDDKWRKCIFELEELKKNINMI 60
Query: 61 SKVIGEKMK 69
+K IG K K
Sbjct: 61 NKEIGNKKK 69
Score = 141 (54.7 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 207 PEKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
P ++L DD +LIATSEQP+CA+H+D + LP++Y G S+CFR+E
Sbjct: 301 PSNEDLTRDDLFLIATSEQPLCALHKDETIESKRLPLKYAGFSSCFRKE 349
Score = 95 (38.5 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 325 VHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
VH+LN T A R +C +LE +Q G+ +P+ LR P Y+N IPF++
Sbjct: 492 VHLLNGTMVAAQRFLCCLLENYQNGEGIVVPEKLR---P--YMNNMDFIPFME 539
Score = 83 (34.3 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 28 KNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDSS---TLPGNH 84
KN+ +++K I N K + D K N+ ++ ++K KE + + + + GN
Sbjct: 55 KNINMINKEIGNKKKVDKNADVEDLKKKSLNIKEEIPKYQLKEKELLKERNKYISKIGNL 114
Query: 85 LHPSVPVSNNEDENGIVRTKGDTEV 109
L+ V S+NED N IV+T G+ ++
Sbjct: 115 LNIKVVCSDNEDNNKIVKTWGECKI 139
>UNIPROTKB|Q8IBS3 [details] [associations]
symbol:PF07_0073 "Seryl-tRNA synthetase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005524 EMBL:AL844506 GO:GO:0020011
HOGENOM:HOG000035937 SUPFAM:SSF46589 KO:K01875 OMA:KSIGEKM
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
ProtClustDB:CLSZ2496096 RefSeq:XP_001349080.1 HSSP:P34945
ProteinModelPortal:Q8IBS3 IntAct:Q8IBS3 MINT:MINT-1573722
PRIDE:Q8IBS3 EnsemblProtists:PF07_0073:mRNA GeneID:2655117
KEGG:pfa:PF07_0073 EuPathDB:PlasmoDB:PF3D7_0717700 Uniprot:Q8IBS3
Length = 539
Score = 245 (91.3 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 65/196 (33%), Positives = 99/196 (50%)
Query: 9 RTEKGGDPEKVRK---NQKDRFKNVELVDKVIENDLKWR-QFRHKADNFNKFKNLCSKVI 64
+ +K D E ++K N K+ +L +K + LK R ++ K N K +CS
Sbjct: 69 KVDKNADVEDLKKKSLNIKEEIPKYQLKEKEL---LKERNKYISKIGNLLNIKVVCSDN- 124
Query: 65 GEKMKAKEPVGDSSTLPG-----NHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLI 119
+ K + G+ LP N +H +V SNN + + + K Y H DL+
Sbjct: 125 EDNNKIVKTWGECKILPACEENDNSIHDNVVNSNNIKRETLNNEVDNKKKIKYYYHYDLL 184
Query: 120 TMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVM 179
I G + + G VAG RGY+L G L ++QYAL+ + K Y P+Y PFFM+K +M
Sbjct: 185 RKIGGANFKKGIQVAGHRGYYLTGAGFLLHNAILQYALNFLVNKKYIPVYPPFFMKKNIM 244
Query: 180 QEVAQLAQFDEELYKV 195
+E A+L F+E LYK+
Sbjct: 245 EECAELDDFEETLYKI 260
Score = 199 (75.1 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 46/90 (51%), Positives = 60/90 (66%)
Query: 234 LPEASLPIRYLGVSTCFRQEDLTKS--IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAF 291
LP+ S I + TC E+ +S I YR+V+IVSGALN+AA+ K DLE +FP S +
Sbjct: 376 LPQHSNKIHEEMIQTC---EEFYQSLNIPYRIVSIVSGALNNAASIKYDLEGFFPTSNQY 432
Query: 292 RELVSCSNCLDYQSRRLLVRYGQTK-KMNE 320
RELVSCSNC DYQS L +RY + K+N+
Sbjct: 433 RELVSCSNCTDYQSINLNIRYSDSSIKIND 462
Score = 161 (61.7 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 31/69 (44%), Positives = 48/69 (69%)
Query: 1 MVLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
MVLD++LFR EKGG+P+K++++++ R+ + VDKVIE D KWR+ + + K N+
Sbjct: 1 MVLDINLFRKEKGGNPDKIKESERKRYHDENNVDKVIEYDDKWRKCIFELEELKKNINMI 60
Query: 61 SKVIGEKMK 69
+K IG K K
Sbjct: 61 NKEIGNKKK 69
Score = 141 (54.7 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 207 PEKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
P ++L DD +LIATSEQP+CA+H+D + LP++Y G S+CFR+E
Sbjct: 301 PSNEDLTRDDLFLIATSEQPLCALHKDETIESKRLPLKYAGFSSCFRKE 349
Score = 95 (38.5 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 325 VHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 377
VH+LN T A R +C +LE +Q G+ +P+ LR P Y+N IPF++
Sbjct: 492 VHLLNGTMVAAQRFLCCLLENYQNGEGIVVPEKLR---P--YMNNMDFIPFME 539
Score = 83 (34.3 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 28 KNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMKAKEPVGDSS---TLPGNH 84
KN+ +++K I N K + D K N+ ++ ++K KE + + + + GN
Sbjct: 55 KNINMINKEIGNKKKVDKNADVEDLKKKSLNIKEEIPKYQLKEKELLKERNKYISKIGNL 114
Query: 85 LHPSVPVSNNEDENGIVRTKGDTEV 109
L+ V S+NED N IV+T G+ ++
Sbjct: 115 LNIKVVCSDNEDNNKIVKTWGECKI 139
>UNIPROTKB|H9KYV2 [details] [associations]
symbol:SARS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004828 "serine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR002317 PRINTS:PR00981 GO:GO:0005524
GO:GO:0005737 GeneTree:ENSGT00660000095591 GO:GO:0004828
GO:GO:0006434 PANTHER:PTHR11778 EMBL:AADN02069375
Ensembl:ENSGALT00000000740 OMA:KPFMPER Uniprot:H9KYV2
Length = 148
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 81/114 (71%), Positives = 95/114 (83%)
Query: 269 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHML 328
GALNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +R+GQTKKM +K+EFVHML
Sbjct: 1 GALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRFGQTKKMMDKVEFVHML 60
Query: 329 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 382
NAT CATTR ICAILE +QTE G+ +P+ LR F+P + + I FVK API+
Sbjct: 61 NATMCATTRTICAILENYQTEEGIVVPERLRDFMPPD-LRQI--IRFVKPAPIE 111
>UNIPROTKB|P67561 [details] [associations]
symbol:serS "Serine--tRNA ligase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP]
UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005886 GO:GO:0005524
GO:GO:0005737 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842584 eggNOG:COG0172
HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 OMA:GPIRYAG ProtClustDB:PRK05431 PIR:G70652
RefSeq:NP_218351.1 RefSeq:NP_338495.1 RefSeq:YP_006517331.1
ProteinModelPortal:P67561 SMR:P67561 PRIDE:P67561
EnsemblBacteria:EBMYCT00000002255 EnsemblBacteria:EBMYCT00000069241
GeneID:13317458 GeneID:886163 GeneID:926323 KEGG:mtc:MT3942
KEGG:mtu:Rv3834c KEGG:mtv:RVBD_3834c PATRIC:18130425
TubercuList:Rv3834c Uniprot:P67561
Length = 419
Score = 228 (85.3 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 50/105 (47%), Positives = 65/105 (61%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
+ YRV+++ +G L +AA+K D EAW P GA+REL S SNC +Q+RRL RY +
Sbjct: 310 VPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELTSTSNCTTFQARRLATRY---RDA 366
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+ K + LN T ATTR + AILE HQ G VR+PD L FV
Sbjct: 367 SGKPQIAATLNGTL-ATTRWLVAILENHQRPDGSVRVPDALVPFV 410
Score = 212 (79.7 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 64/202 (31%), Positives = 95/202 (47%)
Query: 61 SKVIGEKMKAKEP--VGDSSTLPGNHLHPS------VPVSNNEDENGIVRTKGDTE-VRK 111
+K + E++KA E V + HL S VP + ED+ ++ G+ +
Sbjct: 74 AKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVP-AGGEDDYAVLDVVGEPSYLEN 132
Query: 112 KYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTP 171
H++L + +D + GA V+G R YFL G LQ+GL+Q AL ++ G+ P P
Sbjct: 133 PKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALKLAVDNGFVPTIPP 192
Query: 172 FFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRD 231
+R EVM L EE+Y+V G G YL+ TSE P+ H
Sbjct: 193 VLVRPEVMVGTGFLGAHAEEVYRVEGDG---------------LYLVGTSEVPLAGYHSG 237
Query: 232 SWLPEASLPIRYLGVSTCFRQE 253
L + P+RY G S+CFR+E
Sbjct: 238 EILDLSRGPLRYAGWSSCFRRE 259
Score = 67 (28.6 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
++DL L R +P+ VR++Q R ++ LVD ++ D R AD+ + S
Sbjct: 1 MIDLKLLRE----NPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAAS 56
Query: 62 KVIGEKMKAKEP 73
K +G + P
Sbjct: 57 KSVGGASPEERP 68
>TAIR|locus:2008865 [details] [associations]
symbol:SRS "Seryl-tRNA synthetase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0006434
"seryl-tRNA aminoacylation" evidence=IEA;ISS] [GO:0043039 "tRNA
aminoacylation" evidence=TAS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=TAS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009658
"chloroplast organization" evidence=RCA;TAS] [GO:0048481 "ovule
development" evidence=RCA;IMP] [GO:0000096 "sulfur amino acid
metabolic process" evidence=RCA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009069 "serine family amino acid metabolic
process" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009902 "chloroplast relocation"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042545
"cell wall modification" evidence=RCA] [GO:0042793 "transcription
from plastid promoter" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0009507
GO:GO:0009658 GO:GO:0048481 GO:GO:0007005 InterPro:IPR019955
PROSITE:PS50053 HOGENOM:HOG000035937 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 HSSP:P34945 OMA:NENANAM EMBL:AY091115
EMBL:AY122978 IPI:IPI00523407 RefSeq:NP_849647.1 UniGene:At.26248
ProteinModelPortal:Q8RWT8 SMR:Q8RWT8 STRING:Q8RWT8 PRIDE:Q8RWT8
ProMEX:Q8RWT8 EnsemblPlants:AT1G11870.2 GeneID:837734
KEGG:ath:AT1G11870 TAIR:At1g11870 InParanoid:Q8RWT8
PhylomeDB:Q8RWT8 ProtClustDB:PLN02320 ArrayExpress:Q8RWT8
Genevestigator:Q8RWT8 Uniprot:Q8RWT8
Length = 514
Score = 227 (85.0 bits), Expect = 5.2e-35, Sum P(2) = 5.2e-35
Identities = 55/127 (43%), Positives = 76/127 (59%)
Query: 252 QEDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
+EDL S+ ++ +++ + L A +K D+EAW PG G F E+ S SNC DYQSRRL
Sbjct: 380 EEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMPGLGRFGEISSASNCTDYQSRRLG 439
Query: 310 VRYG-----QT--KKMNEKI---EFVHMLNATACATTRVICAILETHQTETG-VRIPDCL 358
+RY QT KK + +FVH LNATACA R++ +LE +Q E G V IP+ L
Sbjct: 440 IRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVPRMMVCLLENYQQEDGSVVIPEPL 499
Query: 359 RKFVPAV 365
R F+ +
Sbjct: 500 RPFMGGI 506
Score = 218 (81.8 bits), Expect = 5.2e-35, Sum P(2) = 5.2e-35
Identities = 63/207 (30%), Positives = 111/207 (53%)
Query: 57 KNLCSKVIG---EKMKAKEPVGD-SSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKK 112
KNL ++ + +K K+ + + ++P N HP VPV ED + I + G ++
Sbjct: 152 KNLKESLVTLEEDLVKLKDELQHVAQSIP-NMTHPDVPVGG-EDSSAIRQEVGSP---RE 206
Query: 113 YS-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTP 167
+S H+ L +D +D ++ A V+G + ++LK AV L++ L+ + LS+ ++KGYTP
Sbjct: 207 FSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLLEMALLNWTLSQVMKKGYTP 266
Query: 168 LYTPFFMRKEVMQEVAQLAQFDE-ELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPIC 226
L TP +R ++++ + D ++Y + G D+ LI T+E P+
Sbjct: 267 LTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGT---------------DQCLIGTAEIPVG 311
Query: 227 AVHRDSWLPEASLPIRYLGVSTCFRQE 253
+H DS L E++LP++Y+ S CFR E
Sbjct: 312 GIHMDSILLESALPLKYIAFSHCFRTE 338
>TIGR_CMR|BA_0012 [details] [associations]
symbol:BA_0012 "seryl-tRNA synthetase" species:198094
"Bacillus anthracis str. Ames" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR eggNOG:COG0172
HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 ProtClustDB:PRK05431 RefSeq:NP_842583.1
RefSeq:YP_016617.1 RefSeq:YP_026303.1 ProteinModelPortal:Q81W25
SMR:Q81W25 IntAct:Q81W25 PRIDE:Q81W25 DNASU:1083752
EnsemblBacteria:EBBACT00000008435 EnsemblBacteria:EBBACT00000015885
EnsemblBacteria:EBBACT00000019780 GeneID:1083752 GeneID:2816402
GeneID:2851276 KEGG:ban:BA_0012 KEGG:bar:GBAA_0012 KEGG:bat:BAS0015
OMA:NTVRESI BioCyc:BANT260799:GJAJ-17-MONOMER
BioCyc:BANT261594:GJ7F-17-MONOMER Uniprot:Q81W25
Length = 424
Score = 214 (80.4 bits), Expect = 4.1e-33, Sum P(2) = 4.1e-33
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGG 136
++P N H S PV ED+N + RT G+ + + H DL T + +D E V G
Sbjct: 103 SIP-NIPHESAPVGETEDDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGS 161
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV 195
R F KG L+ L+ + L E GY + P+ + + M QL +F+E+ +++
Sbjct: 162 RFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI 221
Query: 196 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
E +D +LI T+E P+ +HRD L + LPIRY S+CFR E
Sbjct: 222 ---------------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSE 264
Score = 211 (79.3 bits), Expect = 4.1e-33, Sum P(2) = 4.1e-33
Identities = 44/105 (41%), Positives = 65/105 (61%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
+ YRV+++ +G L AAKK D+E W P G +RE+ SCSN +Q+RR +R+ ++
Sbjct: 315 LPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF--RREP 372
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
N K E VH LN + A R + AILE +Q E G + IP+ LR ++
Sbjct: 373 NGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYM 417
Score = 38 (18.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 175 RKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKD 210
R EV Q+++ L + ++ +I + +VG+ + D
Sbjct: 52 RNEVSQQISVLKREKKDAEALILEMREVGEKVKDLD 87
>TIGR_CMR|GSU_0037 [details] [associations]
symbol:GSU_0037 "seryl-tRNA synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:AE017180 GenomeReviews:AE017180_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
HOGENOM:HOG000035938 ProtClustDB:PRK05431 OMA:NTVRESI
RefSeq:NP_951099.1 ProteinModelPortal:Q74H55 SMR:Q74H55
GeneID:2685629 KEGG:gsu:GSU0037 PATRIC:22022811
BioCyc:GSUL243231:GH27-72-MONOMER Uniprot:Q74H55
Length = 422
Score = 236 (88.1 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 49/105 (46%), Positives = 67/105 (63%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
+AYRVV + +G + +AAK D+E W PG +RE+ SCSN D+QSRR +R+ + +K
Sbjct: 313 LAYRVVELCTGDMGFSAAKTYDIEVWLPGQETYREISSCSNFEDFQSRRASIRFREDEK- 371
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
K EFVH LN + A R + AILE +Q E G V IPD LR ++
Sbjct: 372 -SKPEFVHTLNGSGLAVGRTLVAILENYQQEDGSVVIPDVLRPYM 415
Score = 179 (68.1 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 54/178 (30%), Positives = 84/178 (47%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTE--VRKKYSHVDLITMIDGVDSEAGAIVAGG 136
T+P N HP+VPV +E +N VRT G+ H ++ + +D E GA + G
Sbjct: 101 TVP-NVPHPTVPVGASEADNRQVRTWGEPPCFAFDPKPHWEIGEGLGILDFERGAKLTGA 159
Query: 137 RGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV 195
R +G L+ LV + L E+ Y + PF + +E M QL +F+++L+ +
Sbjct: 160 RFTLYRGAGARLERALVNFMLDLHTERHNYLEMLPPFVVNRESMTGTGQLPKFEDDLFHL 219
Query: 196 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
G D +LI T+E P+ +HR L A LP+ Y + CFR+E
Sbjct: 220 EGV---------------DYFLIPTAEVPVTNIHRAEILKAADLPLSYTAYTPCFRKE 262
>UNIPROTKB|Q9KSZ6 [details] [associations]
symbol:serS "Serine--tRNA ligase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0172 GO:GO:0097056 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 ProtClustDB:PRK05431 OMA:SESSHYA PIR:A82242
RefSeq:NP_230755.1 ProteinModelPortal:Q9KSZ6 DNASU:2614380
GeneID:2614380 KEGG:vch:VC1110 PATRIC:20081312 Uniprot:Q9KSZ6
Length = 435
Score = 197 (74.4 bits), Expect = 9.1e-31, Sum P(3) = 9.1e-31
Identities = 59/183 (32%), Positives = 88/183 (48%)
Query: 77 SSTLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGA 131
+ T+P N +VP ++ EN V G D EV+ HVDL M DG+D +
Sbjct: 102 TQTVP-NIPDDAVPNGKDDSENVEVSRWGTPKTYDFEVK---DHVDLGEMGDGLDFASAT 157
Query: 132 IVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDE 190
+ G R +KG L + Q+ L ++ GYT LY P+ + E + QL +F +
Sbjct: 158 KITGARFVVMKGQFARLHRAIAQFMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQ 217
Query: 191 ELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 250
+L+ EK D P + L LI T+E P+ + RD+ L EA LP++ + CF
Sbjct: 218 DLFHTEPLTEKASDEEPRR--LS---LIPTAEVPVTNLVRDTILDEAELPLKMTAHTPCF 272
Query: 251 RQE 253
R E
Sbjct: 273 RSE 275
Score = 189 (71.6 bits), Expect = 9.1e-31, Sum P(3) = 9.1e-31
Identities = 40/105 (38%), Positives = 60/105 (57%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
+ YR V + +G + + K DLE W P +RE+ SCSN D+Q+RR+ R+ +K
Sbjct: 326 LPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYREISSCSNMWDFQARRMQARF--RRKG 383
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+K E VH LN + A R + AILE +Q G + IP L+K++
Sbjct: 384 EKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAIPAVLQKYM 428
Score = 56 (24.8 bits), Expect = 9.1e-31, Sum P(3) = 9.1e-31
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFK-NVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
+LD L RTE E K + FK +VE + + +E K Q + +N +N
Sbjct: 1 MLDSKLLRTELD---ETAAKLARRGFKLDVETI-RTLEEQRKSIQV--EVENLQSTRNSI 54
Query: 61 SKVIGEKMKAKEPVG 75
SK IG+ M + + G
Sbjct: 55 SKQIGQLMASGDKAG 69
Score = 40 (19.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 175 RKEVMQEVAQLAQFDEELYKVIGK----GEKVGDSAPEK------DELDDK 215
RK + EV L + K IG+ G+K G A ++ D+LD K
Sbjct: 37 RKSIQVEVENLQSTRNSISKQIGQLMASGDKAGAEAVKQQIGTLGDDLDAK 87
>TIGR_CMR|VC_1110 [details] [associations]
symbol:VC_1110 "seryl-tRNA synthetase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
ProtClustDB:PRK05431 OMA:SESSHYA PIR:A82242 RefSeq:NP_230755.1
ProteinModelPortal:Q9KSZ6 DNASU:2614380 GeneID:2614380
KEGG:vch:VC1110 PATRIC:20081312 Uniprot:Q9KSZ6
Length = 435
Score = 197 (74.4 bits), Expect = 9.1e-31, Sum P(3) = 9.1e-31
Identities = 59/183 (32%), Positives = 88/183 (48%)
Query: 77 SSTLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGA 131
+ T+P N +VP ++ EN V G D EV+ HVDL M DG+D +
Sbjct: 102 TQTVP-NIPDDAVPNGKDDSENVEVSRWGTPKTYDFEVK---DHVDLGEMGDGLDFASAT 157
Query: 132 IVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDE 190
+ G R +KG L + Q+ L ++ GYT LY P+ + E + QL +F +
Sbjct: 158 KITGARFVVMKGQFARLHRAIAQFMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQ 217
Query: 191 ELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 250
+L+ EK D P + L LI T+E P+ + RD+ L EA LP++ + CF
Sbjct: 218 DLFHTEPLTEKASDEEPRR--LS---LIPTAEVPVTNLVRDTILDEAELPLKMTAHTPCF 272
Query: 251 RQE 253
R E
Sbjct: 273 RSE 275
Score = 189 (71.6 bits), Expect = 9.1e-31, Sum P(3) = 9.1e-31
Identities = 40/105 (38%), Positives = 60/105 (57%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
+ YR V + +G + + K DLE W P +RE+ SCSN D+Q+RR+ R+ +K
Sbjct: 326 LPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYREISSCSNMWDFQARRMQARF--RRKG 383
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+K E VH LN + A R + AILE +Q G + IP L+K++
Sbjct: 384 EKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAIPAVLQKYM 428
Score = 56 (24.8 bits), Expect = 9.1e-31, Sum P(3) = 9.1e-31
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFK-NVELVDKVIENDLKWRQFRHKADNFNKFKNLC 60
+LD L RTE E K + FK +VE + + +E K Q + +N +N
Sbjct: 1 MLDSKLLRTELD---ETAAKLARRGFKLDVETI-RTLEEQRKSIQV--EVENLQSTRNSI 54
Query: 61 SKVIGEKMKAKEPVG 75
SK IG+ M + + G
Sbjct: 55 SKQIGQLMASGDKAG 69
Score = 40 (19.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 175 RKEVMQEVAQLAQFDEELYKVIGK----GEKVGDSAPEK------DELDDK 215
RK + EV L + K IG+ G+K G A ++ D+LD K
Sbjct: 37 RKSIQVEVENLQSTRNSISKQIGQLMASGDKAGAEAVKQQIGTLGDDLDAK 87
>ZFIN|ZDB-GENE-040426-1616 [details] [associations]
symbol:sars2 "seryl-tRNA synthetase 2,
mitochondrial" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006418 "tRNA aminoacylation for
protein translation" evidence=IEA] [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862
ZFIN:ZDB-GENE-040426-1616 GO:GO:0005524 GO:GO:0005737
SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 CTD:54938
HOVERGEN:HBG023869 EMBL:BC055610 IPI:IPI00612584 RefSeq:NP_957473.1
UniGene:Dr.84930 ProteinModelPortal:Q7SXG8 SMR:Q7SXG8 STRING:Q7SXG8
GeneID:394154 KEGG:dre:394154 InParanoid:Q7SXG8 NextBio:20815104
Uniprot:Q7SXG8
Length = 510
Score = 253 (94.1 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 53/132 (40%), Positives = 83/132 (62%)
Query: 252 QEDLTKSIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
Q+++ S+ YRV+++ + L A +K D+EAW PG G+F E+ S SNC DYQSRRL
Sbjct: 376 QKEIFSSLKLHYRVLDMPTQELGPPAYRKFDIEAWMPGRGSFGEISSASNCTDYQSRRLD 435
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVN 368
+RY + + K+++ H +NATACA R I AILET+QT+ G V++P+ L++++ +
Sbjct: 436 IRY---EGEDGKLQYAHTVNATACAIPRTIIAILETYQTKKGTVQVPEVLQQYIGMEVIE 492
Query: 369 EAGEIPFVKTAP 380
+ P P
Sbjct: 493 KPKYTPIKYIGP 504
Score = 133 (51.9 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 54/227 (23%), Positives = 98/227 (43%)
Query: 31 ELVDKVIENDLK-WRQFRHKADNFNKFKNLCSKV-IGEKMKAKEPVGDSSTLPGNHLHPS 88
ELV K ++ L ++ H + + +++ + EK KE + LP N HPS
Sbjct: 119 ELVGKHDKSTLSSLEEYGHAREEGRAIREKLNQLYLQEKELEKEHYCRALRLP-NRTHPS 177
Query: 89 VPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAV 146
VP+ + E + +V G+ K H+ + +D + + V+G R Y+L+G
Sbjct: 178 VPIGD-ESQARVVEVVGEKREFDFKPKGHLQIGESLDIIRQRRLSHVSGHRSYYLRGAGA 236
Query: 147 CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSA 206
LQ L +A+ ++G+ P+ P + K V+ E + ++ +V
Sbjct: 237 QLQFALQNFAMDLLQKRGFIPMVVPDIL-KSVVFEGCGMQPHAQK--------SQVYSLN 287
Query: 207 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
P++ D L T + + D + LP+R + STC+R E
Sbjct: 288 PKRSP--DLNLAGTGKVGVAGYFMDHAVNLKDLPVRTVCSSTCYRAE 332
>TIGR_CMR|CHY_2697 [details] [associations]
symbol:CHY_2697 "seryl-tRNA synthetase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
KO:K01875 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HSSP:Q9N0F3 OMA:EESWEWH
ProtClustDB:PRK05431 RefSeq:YP_361479.1 ProteinModelPortal:Q3A8Q5
SMR:Q3A8Q5 STRING:Q3A8Q5 PRIDE:Q3A8Q5 GeneID:3726256
KEGG:chy:CHY_2697 PATRIC:21278417
BioCyc:CHYD246194:GJCN-2695-MONOMER Uniprot:Q3A8Q5
Length = 424
Score = 216 (81.1 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 45/105 (42%), Positives = 64/105 (60%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
+ YRVV + +G L +AAK D+E W P ++E+ SCSN D+Q+RR +RY + K
Sbjct: 314 LPYRVVVLCTGDLGFSAAKTYDIEVWLPSYNDYKEISSCSNFEDFQARRAKIRYKEHPKA 373
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
K EFVH LN + A R + AILE +Q E G V +P+ LR ++
Sbjct: 374 --KPEFVHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEVLRPYM 416
Score = 173 (66.0 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 56/180 (31%), Positives = 84/180 (46%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRK----KYSHVDLITMIDGVDSEAGAIVA 134
T+P N H SVPV + EN VR G E RK +H ++ +D +D G+ V
Sbjct: 102 TIP-NIPHESVPVGKDSSENVEVRRWG--EPRKFTFTPKAHWEIGEELDILDFARGSKVT 158
Query: 135 GGRGYFLKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELY 193
G R F KG L+ ++ + L E GY ++ PF + + M QL +F E+++
Sbjct: 159 GARFTFYKGLGAMLERAVINFMLDLHTREHGYVEVFPPFIVNADSMMGTGQLPKFAEDMF 218
Query: 194 KVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
K+ G + YLI T+E P+ ++R+ L LPI + S CFR E
Sbjct: 219 KLEGL---------------NYYLIPTAEVPVTNLYREEILDGDKLPIYHCAYSACFRAE 263
>TIGR_CMR|DET_0577 [details] [associations]
symbol:DET_0577 "seryl-tRNA synthetase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HSSP:Q9N0F3
HOGENOM:HOG000035938 ProtClustDB:PRK05431 OMA:NTVRESI
RefSeq:YP_181319.1 ProteinModelPortal:Q3Z8Y0 SMR:Q3Z8Y0
STRING:Q3Z8Y0 GeneID:3230108 KEGG:det:DET0577 PATRIC:21608223
BioCyc:DETH243164:GJNF-578-MONOMER Uniprot:Q3Z8Y0
Length = 413
Score = 198 (74.8 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 52/175 (29%), Positives = 87/175 (49%)
Query: 88 SVPVSNNEDENGIVRTKGDTEVRKKYS-----HVDLITMIDGVDSEAGAIVAGGRGYFLK 142
SVPV +E EN ++ +G+ ++ +S H +L +D +D + G ++G R Y LK
Sbjct: 101 SVPVGKDESENVVLYYRGE---KRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILK 157
Query: 143 GPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
G LQ L+ + L K GYT +Y P+ +++E + L +F + LY
Sbjct: 158 GEGARLQRALIAFMLDLHTRKHGYTEIYPPYMIKRECLVASGNLPKFADNLYH------- 210
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLT 256
D +D + + T+E P+ +HRD L LPI Y+ + CFR+E ++
Sbjct: 211 --------DAEEDYWWVPTAEAPLTNLHRDEILSVEQLPIHYVAYTACFRREKMS 257
Score = 192 (72.6 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 40/105 (38%), Positives = 64/105 (60%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YR+ +V+ ++ +AK D+E + PG + E+ SCSNC D+Q RR VR+ +T +
Sbjct: 305 IPYRLKQLVTADISFGSAKSYDIEMYSPGVDEWLEVSSCSNCTDFQGRRANVRFRRTPEA 364
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
K EFVH LN + A RV+ +++E +Q G + +P+ LR F+
Sbjct: 365 --KPEFVHTLNGSGLALPRVMISVIENYQLPDGSIVVPEVLRPFM 407
>RGD|1309456 [details] [associations]
symbol:Sars2 "seryl-tRNA synthetase 2, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862
RGD:1309456 GO:GO:0005524 GO:GO:0005737 EMBL:CH473979
SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 CTD:54938
OrthoDB:EOG4KD6KZ GeneTree:ENSGT00660000095623 IPI:IPI00364070
RefSeq:NP_001099710.1 UniGene:Rn.154470 Ensembl:ENSRNOT00000027166
GeneID:292759 KEGG:rno:292759 UCSC:RGD:1309456 NextBio:634704
Uniprot:D3ZM09
Length = 518
Score = 219 (82.2 bits), Expect = 3.6e-29, Sum P(2) = 3.6e-29
Identities = 47/130 (36%), Positives = 78/130 (60%)
Query: 253 EDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVR 311
E LT+ + +RV+++ + L A +K D+EAW PG G + E+ S SNC D+QSRRL +
Sbjct: 377 EILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRYGEVTSASNCTDFQSRRLYIM 436
Query: 312 YGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEA 370
+ +T+ +++F H +NATACA RV+ A+LE++Q + G V +P L+ ++ +
Sbjct: 437 F-ETE--TGELQFAHTVNATACAVPRVLIALLESNQQKDGSVLVPAALQPYLGTDRITAP 493
Query: 371 GEIPFVKTAP 380
+P P
Sbjct: 494 THVPLQYIGP 503
Score = 172 (65.6 bits), Expect = 3.6e-29, Sum P(2) = 3.6e-29
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 80 LPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGR 137
LP N HP PV + E + ++R GD + H+++ +D + + + V+G R
Sbjct: 170 LP-NQTHPDTPVGD-ESQARVLRVVGDKPAFSFQPRGHLEIGEKLDIIRQKRLSHVSGHR 227
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD-EELYKVI 196
Y+L+G LQ GLV + LSK + +G+TP+ P +R V + + ++Y +
Sbjct: 228 SYYLRGAGALLQHGLVNFTLSKLVSRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNI- 286
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+ +D L T+E + D + LP+R + STC+R E
Sbjct: 287 -----------DPSRFEDLNLAGTAEVGLAGYFMDHAVASRDLPVRMVCASTCYRAE 332
>UNIPROTKB|G8JKV4 [details] [associations]
symbol:SARS2 "Serine--tRNA ligase, mitochondrial"
species:9913 "Bos taurus" [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862
GO:GO:0005524 GO:GO:0005737 SUPFAM:SSF46589 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 GeneTree:ENSGT00660000095623 EMBL:DAAA02047041
Ensembl:ENSBTAT00000002334 OMA:NENANAM Uniprot:G8JKV4
Length = 459
Score = 218 (81.8 bits), Expect = 8.6e-29, Sum P(2) = 8.6e-29
Identities = 47/132 (35%), Positives = 78/132 (59%)
Query: 251 RQEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
+ E LT+ + +RV+++ + L A +K D+EAW PG G F E+ S SNC D+QSRRL
Sbjct: 316 QMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLH 375
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVN 368
+ + QT+ +++F H +NAT CA R++ A+LE++Q + G V +P L+ ++ +
Sbjct: 376 IMF-QTEA--GELQFAHTVNATGCAVPRLLIALLESYQQKDGSVLVPPALQPYLGTDRIT 432
Query: 369 EAGEIPFVKTAP 380
+P P
Sbjct: 433 TPTHVPLQYIGP 444
Score = 167 (63.8 bits), Expect = 8.6e-29, Sum P(2) = 8.6e-29
Identities = 50/176 (28%), Positives = 81/176 (46%)
Query: 80 LPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGR 137
LP N HP VPV + E + ++ GD + H+++ +D + + + V+G R
Sbjct: 111 LP-NQTHPDVPVGD-ESQARVLHVVGDKPAFSFQPRGHLEIAEKLDIIRQKRLSHVSGHR 168
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
Y+L+G LQ GLV + L+K I +G+TP+ P +R V +
Sbjct: 169 SYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLLRGVVFEGCGMTPN---------A 219
Query: 198 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
K ++ + P + E D L T+E + D + LPIR + STC+R E
Sbjct: 220 KPSQIYNIDPSRFE--DLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAE 273
>MGI|MGI:1919234 [details] [associations]
symbol:Sars2 "seryl-aminoacyl-tRNA synthetase 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0006412 "translation" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0006434
"seryl-tRNA aminoacylation" evidence=ISS] [GO:0016874 "ligase
activity" evidence=IEA] UniPathway:UPA00906 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 MGI:MGI:1919234 GO:GO:0005739
GO:GO:0005524 GO:GO:0005759 EMBL:CH466593 eggNOG:COG0172
HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 CTD:54938 HOVERGEN:HBG023869 OrthoDB:EOG4KD6KZ
BRENDA:6.1.1.11 EMBL:AB029949 EMBL:AK010491 EMBL:AK087606
EMBL:AK140760 EMBL:BC079664 IPI:IPI00109354 RefSeq:NP_076126.2
UniGene:Mm.333725 ProteinModelPortal:Q9JJL8 SMR:Q9JJL8
STRING:Q9JJL8 PhosphoSite:Q9JJL8 PaxDb:Q9JJL8 PRIDE:Q9JJL8
Ensembl:ENSMUST00000094632 GeneID:71984 KEGG:mmu:71984
GeneTree:ENSGT00660000095623 InParanoid:Q68FL2 OMA:KERNNIT
NextBio:335130 Bgee:Q9JJL8 CleanEx:MM_SARS2 Genevestigator:Q9JJL8
GermOnline:ENSMUSG00000070699 Uniprot:Q9JJL8
Length = 518
Score = 219 (82.2 bits), Expect = 9.4e-29, Sum P(2) = 9.4e-29
Identities = 47/130 (36%), Positives = 78/130 (60%)
Query: 253 EDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVR 311
E LT+ + +RV+++ + L A +K D+EAW PG G + E+ S SNC D+QSRRL +
Sbjct: 377 EILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRYGEVTSASNCTDFQSRRLYIM 436
Query: 312 YGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEA 370
+ +T+ +++F H +NATACA RV+ A+LE++Q + G V +P L+ ++ +
Sbjct: 437 F-ETE--TGELQFAHTVNATACAVPRVLIALLESNQQKDGSVLVPAALQPYLGTDRITAP 493
Query: 371 GEIPFVKTAP 380
+P P
Sbjct: 494 THVPLQYIGP 503
Score = 168 (64.2 bits), Expect = 9.4e-29, Sum P(2) = 9.4e-29
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 80 LPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGR 137
LP N HP PV + E + +VR G+ + H+++ +D + + + V+G R
Sbjct: 170 LP-NQTHPDTPVGD-ESQARVVRVVGEKPAFSFQPRGHLEIGEKLDIIRQKRLSHVSGHR 227
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD-EELYKVI 196
Y+L+G LQ GLV + LSK + +G+TP+ P +R V + + ++Y +
Sbjct: 228 SYYLRGAGALLQHGLVNFTLSKLVSRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNI- 286
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+ +D L T+E + D + LP+R + STC+R E
Sbjct: 287 -----------DPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPVRMVCASTCYRAE 332
Score = 42 (19.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 174 MRKEVMQEVAQLAQFDEELYK-VIGKGEKVGDSAPEKDELDDKYLIATSEQP 224
+RK++ Q Q +E+LY+ + + P DE + + E+P
Sbjct: 145 IRKQLTPLYPQETQLEEQLYQQALRLPNQTHPDTPVGDESQARVVRVVGEKP 196
>UNIPROTKB|E7EX87 [details] [associations]
symbol:SARS2 "Serine--tRNA ligase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR007397 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF04300 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 PROSITE:PS51114 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 InterPro:IPR008979 SUPFAM:SSF49785
EMBL:AC011455 SUPFAM:SSF46589 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
HGNC:HGNC:17697 OMA:KERNNIT IPI:IPI00645782
ProteinModelPortal:E7EX87 SMR:E7EX87 PRIDE:E7EX87
Ensembl:ENST00000448145 UCSC:uc010xuq.1 ArrayExpress:E7EX87
Bgee:E7EX87 Uniprot:E7EX87
Length = 518
Score = 222 (83.2 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 48/132 (36%), Positives = 79/132 (59%)
Query: 251 RQEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
+ E LT+ + +RV+++ + L A +K D+EAW PG G F E+ S SNC D+QSRRL
Sbjct: 375 QMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLH 434
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVN 368
+ + QT+ +++F H +NATACA R++ A+LE++Q + G V +P L+ ++ +
Sbjct: 435 IMF-QTEA--GELQFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYLGTDRIT 491
Query: 369 EAGEIPFVKTAP 380
+P P
Sbjct: 492 APTHVPLQYIGP 503
Score = 164 (62.8 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 51/180 (28%), Positives = 85/180 (47%)
Query: 80 LPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGR 137
LP N HP VPV + E + ++ GD V + H+++ +D + + + V+G R
Sbjct: 170 LP-NQTHPDVPVGD-ESQARVLHMVGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHR 227
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD-EELYKVI 196
Y+L+G LQ GLV + +K + +G+TP+ P +R V + + ++Y +
Sbjct: 228 SYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNI- 286
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLT 256
D A KD L+ L T+E + D + LP+R + STC+R E T
Sbjct: 287 -------DPARFKD-LN---LAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCYRAETNT 335
Score = 46 (21.3 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 174 MRKEVMQEVAQLAQFDEELY-KVIGKGEKVGDSAPEKDELDDKYLIATSEQPI 225
+RKE++ + AQ +E+ Y + + + P DE + L ++P+
Sbjct: 145 IRKELVHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHMVGDKPV 197
>UNIPROTKB|Q9NP81 [details] [associations]
symbol:SARS2 "Serine--tRNA ligase, mitochondrial"
species:9606 "Homo sapiens" [GO:0097056 "selenocysteinyl-tRNA(Sec)
biosynthetic process" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006434
"seryl-tRNA aminoacylation" evidence=ISS] [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS;TAS] [GO:0005759 "mitochondrial
matrix" evidence=TAS] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 UniPathway:UPA00906
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005759 HOGENOM:HOG000035937 GO:GO:0097056 EMBL:AC011455
SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 CTD:54938
HOVERGEN:HBG023869 BRENDA:6.1.1.11 EMBL:AB029948 EMBL:AK000457
EMBL:AK293414 EMBL:BC001020 EMBL:BC042912 IPI:IPI00328361
IPI:IPI00927163 RefSeq:NP_001139373.1 RefSeq:NP_060297.1
UniGene:Hs.709416 ProteinModelPortal:Q9NP81 SMR:Q9NP81
IntAct:Q9NP81 STRING:Q9NP81 PhosphoSite:Q9NP81 DMDM:23822219
PRIDE:Q9NP81 GeneID:54938 KEGG:hsa:54938 UCSC:uc002ojz.2
GeneCards:GC19M039405 HGNC:HGNC:17697 MIM:612804 MIM:613845
neXtProt:NX_Q9NP81 PharmGKB:PA134899753 InParanoid:Q9NP81
ChiTaRS:SARS2 GenomeRNAi:54938 NextBio:58062 ArrayExpress:Q9NP81
Bgee:Q9NP81 CleanEx:HS_SARS2 Genevestigator:Q9NP81
GermOnline:ENSG00000104835 Uniprot:Q9NP81
Length = 518
Score = 222 (83.2 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 48/132 (36%), Positives = 79/132 (59%)
Query: 251 RQEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
+ E LT+ + +RV+++ + L A +K D+EAW PG G F E+ S SNC D+QSRRL
Sbjct: 375 QMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLH 434
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVN 368
+ + QT+ +++F H +NATACA R++ A+LE++Q + G V +P L+ ++ +
Sbjct: 435 IMF-QTEA--GELQFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYLGTDRIT 491
Query: 369 EAGEIPFVKTAP 380
+P P
Sbjct: 492 APTHVPLQYIGP 503
Score = 164 (62.8 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 51/180 (28%), Positives = 85/180 (47%)
Query: 80 LPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGR 137
LP N HP VPV + E + ++ GD V + H+++ +D + + + V+G R
Sbjct: 170 LP-NQTHPDVPVGD-ESQARVLHMVGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHR 227
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD-EELYKVI 196
Y+L+G LQ GLV + +K + +G+TP+ P +R V + + ++Y +
Sbjct: 228 SYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNI- 286
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLT 256
D A KD L+ L T+E + D + LP+R + STC+R E T
Sbjct: 287 -------DPARFKD-LN---LAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCYRAETNT 335
Score = 46 (21.3 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 174 MRKEVMQEVAQLAQFDEELY-KVIGKGEKVGDSAPEKDELDDKYLIATSEQPI 225
+RKE++ + AQ +E+ Y + + + P DE + L ++P+
Sbjct: 145 IRKELVHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHMVGDKPV 197
>UNIPROTKB|Q9N0F3 [details] [associations]
symbol:SARS2 "Serine--tRNA ligase, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0004828 "serine-tRNA ligase activity" evidence=IDA] [GO:0005524
"ATP binding" evidence=IDA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IDA] [GO:0097056 "selenocysteinyl-tRNA(Sec) biosynthetic
process" evidence=IEA] [GO:0005759 "mitochondrial matrix"
evidence=IEA] UniPathway:UPA00906 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005739 GO:GO:0005524 GO:GO:0005759
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
KO:K01875 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 TIGRFAMs:TIGR00414 EMBL:AB029947 EMBL:BT021565
EMBL:BT021900 EMBL:BC140548 IPI:IPI00698619 RefSeq:NP_776882.1
UniGene:Bt.8850 PDB:1WLE PDBsum:1WLE ProteinModelPortal:Q9N0F3
SMR:Q9N0F3 STRING:Q9N0F3 PRIDE:Q9N0F3 GeneID:282060 KEGG:bta:282060
CTD:54938 HOVERGEN:HBG023869 InParanoid:Q9N0F3 OrthoDB:EOG4KD6KZ
BRENDA:6.1.1.11 EvolutionaryTrace:Q9N0F3 NextBio:20805916
ArrayExpress:Q9N0F3 Uniprot:Q9N0F3
Length = 518
Score = 218 (81.8 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 47/132 (35%), Positives = 78/132 (59%)
Query: 251 RQEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
+ E LT+ + +RV+++ + L A +K D+EAW PG G F E+ S SNC D+QSRRL
Sbjct: 375 QMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLH 434
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVN 368
+ + QT+ +++F H +NAT CA R++ A+LE++Q + G V +P L+ ++ +
Sbjct: 435 IMF-QTEA--GELQFAHTVNATGCAVPRLLIALLESYQQKDGSVLVPPALQPYLGTDRIT 491
Query: 369 EAGEIPFVKTAP 380
+P P
Sbjct: 492 TPTHVPLQYIGP 503
Score = 167 (63.8 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 50/176 (28%), Positives = 81/176 (46%)
Query: 80 LPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGR 137
LP N HP VPV + E + ++ GD + H+++ +D + + + V+G R
Sbjct: 170 LP-NQTHPDVPVGD-ESQARVLHVVGDKPAFSFQPRGHLEIAEKLDIIRQKRLSHVSGHR 227
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIG 197
Y+L+G LQ GLV + L+K I +G+TP+ P +R V +
Sbjct: 228 SYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLLRGVVFEGCGMTPN---------A 278
Query: 198 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
K ++ + P + E D L T+E + D + LPIR + STC+R E
Sbjct: 279 KPSQIYNIDPSRFE--DLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAE 332
Score = 44 (20.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 130 GAIVAGGRGYFLKGPAVCLQ 149
G +VAG RG L+G VC Q
Sbjct: 10 GPLVAG-RGLRLRGGCVCNQ 28
>TIGR_CMR|APH_0427 [details] [associations]
symbol:APH_0427 "seryl-tRNA synthetase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:CP000235 GenomeReviews:CP000235_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
RefSeq:YP_505030.1 STRING:Q2GKS1 GeneID:3931299 KEGG:aph:APH_0427
PATRIC:20949470 HOGENOM:HOG000035938 OMA:GPIRYAG
ProtClustDB:PRK05431 BioCyc:APHA212042:GHPM-454-MONOMER
Uniprot:Q2GKS1
Length = 428
Score = 246 (91.7 bits), Expect = 5.5e-28, Sum P(2) = 5.5e-28
Identities = 49/125 (39%), Positives = 74/125 (59%)
Query: 253 EDLTK--SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLV 310
E++ K + YRVV + +G + +A+ D+E W P +RE+ SCSNC D+Q+RR+
Sbjct: 304 EEVLKRLELPYRVVLLCTGDMGFSASISYDIEVWMPAQNKYREISSCSNCKDFQARRMGA 363
Query: 311 RYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 369
+ +K N++ FVH LN +A A R I AI+E +Q G + IPD LRKF+ A Y+
Sbjct: 364 KCFYLEKQNKRSSFVHTLNGSALALGRTIAAIMENYQNSDGTITIPDALRKFMSADYIRP 423
Query: 370 AGEIP 374
+P
Sbjct: 424 GTALP 428
Score = 122 (48.0 bits), Expect = 5.5e-28, Sum P(2) = 5.5e-28
Identities = 53/206 (25%), Positives = 88/206 (42%)
Query: 57 KNLCSKVIGEKMKAKEPVGDS---STLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKY 113
K L ++ + + K G S +LP N +VP + D+N VR+ G ++ +
Sbjct: 76 KKLAHEISELEERIKRDTGLSYLLCSLP-NIPDDAVPFGKSADDNVEVRSYGQ---KRSF 131
Query: 114 S-----HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTP 167
S H L M++ +D A ++G R L G L+ GL + L ++ GYT
Sbjct: 132 SFEIKPHYVLGEMLNLMDFRRAAFLSGSRFSILSGQLAALERGLASFMLEMHTKEFGYTE 191
Query: 168 LYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICA 227
++ P + M V QL +F + ++ D L+ TSE +
Sbjct: 192 VFHPSLVNDLAMFNVGQLPKFTHDSFQTT----------------DAMRLVPTSEVVLTN 235
Query: 228 VHRDSWLPEASLPIRYLGVSTCFRQE 253
+ ++ L SLP+R+ S CFR E
Sbjct: 236 LVANTNLHRNSLPLRFTAYSQCFRSE 261
>TIGR_CMR|CBU_1188 [details] [associations]
symbol:CBU_1188 "seryl-tRNA synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:AE016828 GenomeReviews:AE016828_GR eggNOG:COG0172 EMBL:X75627
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 OMA:EESWEWH
HOGENOM:HOG000035938 ProtClustDB:PRK05431 PIR:S43135
RefSeq:NP_820183.1 ProteinModelPortal:P39919 SMR:P39919
PRIDE:P39919 GeneID:1209092 KEGG:cbu:CBU_1188 PATRIC:17931121
BioCyc:CBUR227377:GJ7S-1177-MONOMER Uniprot:P39919
Length = 423
Score = 225 (84.3 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 44/109 (40%), Positives = 65/109 (59%)
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
++ YRVV + +G L AAAK DLE W P +RE+ SCSNC D+Q+RR+ R+ K
Sbjct: 314 ALPYRVVELCAGDLGFAAAKTYDLEVWLPSQNKYREISSCSNCEDFQARRIQARWRNPK- 372
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 365
K E +H LN + A R + A++E +Q G +R+PD L+ ++ V
Sbjct: 373 -TGKPELLHTLNGSGLAVGRTLVAVMENYQQADGHIRVPDALKSYMGGV 420
Score = 143 (55.4 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 47/172 (27%), Positives = 79/172 (45%)
Query: 86 HPSVPVSNNEDENGIVRTKGDT---EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLK 142
H SVP +E++N +R G + K H L + +D EA A ++G R L+
Sbjct: 108 HDSVPDGKSENDNREIRQWGAPPGFDFTPK-DHTVLGERDNQLDFEAAAKLSGARFVVLR 166
Query: 143 GPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEK 201
G L Q+ L ++ GY +Y P+ + +E + QL +F EE ++V G
Sbjct: 167 GSLARAHRALAQFMLDLHTDQHGYEEVYVPYLVHEECLYGTGQLPKFREEQFQVAG---- 222
Query: 202 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
D + +L+ T E P+ + RD + +LP +++ + CFR E
Sbjct: 223 --------DR--NFFLVPTGEVPLVNLARDEIIEAPALPKKWVAQTPCFRSE 264
>UNIPROTKB|E2QUT6 [details] [associations]
symbol:FBXO17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862
GO:GO:0005524 GO:GO:0005737 SUPFAM:SSF46589 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 GeneTree:ENSGT00660000095623 EMBL:AAEX03000966
Ensembl:ENSCAFT00000009057 OMA:EERFYLR Uniprot:E2QUT6
Length = 524
Score = 223 (83.6 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 49/132 (37%), Positives = 78/132 (59%)
Query: 251 RQEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL 309
+ E LT+ + +RV+++ + L A +K D+EAW PG G F E+ S SNC D+QSRRL
Sbjct: 381 QMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLH 440
Query: 310 VRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVN 368
+ + K+ E ++F H +NATACA R++ A+LE++Q E G V +P L+ ++ +
Sbjct: 441 IMF--QKEAGE-LQFAHTVNATACAVPRLLIALLESNQQEDGSVLVPPVLQPYLGTDRIT 497
Query: 369 EAGEIPFVKTAP 380
+P P
Sbjct: 498 VPTHVPLQYIGP 509
Score = 148 (57.2 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 47/183 (25%), Positives = 81/183 (44%)
Query: 80 LPGNHLHPSVPVSNNEDENGIVRTKGDTE--------VRKKYSHVDLITMIDGVDSEAGA 131
LP N HP VP + +E + ++ GD +R +++ +D + + +
Sbjct: 170 LP-NRTHPDVP-TGDESQARVLHVVGDKPGFSSQYHFLRPTSGPLEIAEKLDILRQKRLS 227
Query: 132 IVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD-E 190
V+G R Y+L+G LQ GLV + L+K I +G+TP+ P +R V + +
Sbjct: 228 HVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLLRGAVFEGCGMTPNANPS 287
Query: 191 ELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 250
++Y + + +D L T+E + D + LPIR + STC+
Sbjct: 288 QIYNI------------DPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCY 335
Query: 251 RQE 253
R E
Sbjct: 336 RAE 338
>TIGR_CMR|CPS_2755 [details] [associations]
symbol:CPS_2755 "seryl-tRNA synthetase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HSSP:Q9N0F3
HOGENOM:HOG000035938 RefSeq:YP_269467.1 ProteinModelPortal:Q480Q2
SMR:Q480Q2 STRING:Q480Q2 GeneID:3521069 KEGG:cps:CPS_2755
PATRIC:21468547 OMA:SESSHYA BioCyc:CPSY167879:GI48-2816-MONOMER
Uniprot:Q480Q2
Length = 426
Score = 186 (70.5 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 39/105 (37%), Positives = 60/105 (57%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
+ YR V + SG + +AAK DLE W P +RE+ SCSN +Q+RR+ R+ + +
Sbjct: 317 LPYRTVQLCSGDVGFSAAKTFDLEVWLPAQDTYREISSCSNMGAFQARRMQARF-RNNET 375
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
N K E +H LN + A R + AILE +Q G + +P L+ ++
Sbjct: 376 N-KPELLHTLNGSGLAVGRTLVAILENYQQADGSINVPTVLQPYM 419
Score = 180 (68.4 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 60/184 (32%), Positives = 89/184 (48%)
Query: 77 SSTLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMID-GVDSEAG 130
+S +P N L SVP +ED+N V+ G D EV+ HVDL +D G+D E+G
Sbjct: 100 ASAIP-NLLDDSVPEGKDEDDNVEVKRWGTPREFDFEVK---DHVDLGFSVDKGLDFESG 155
Query: 131 AIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFD 189
A +AG R ++G L + Q+ L E+ GY +Y P+ + + QL +F
Sbjct: 156 AKLAGTRFVVMRGKIARLHRAIAQFMLDTHTEEHGYQEMYVPYLVNAASLYGTGQLPKFG 215
Query: 190 EELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTC 249
E+L+ D + +K L I TSE P+ + RD + E LPI+ + C
Sbjct: 216 EDLFHT--------DLSNKKFSL-----IPTSEVPLTNLVRDEIVDEDDLPIKMTAHTPC 262
Query: 250 FRQE 253
FR E
Sbjct: 263 FRSE 266
>TIGR_CMR|CJE_0438 [details] [associations]
symbol:CJE_0438 "seryl-tRNA synthetase" species:195099
"Campylobacter jejuni RM1221" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
HOGENOM:HOG000035938 ProtClustDB:PRK05431 OMA:NTVRESI
RefSeq:YP_178457.1 ProteinModelPortal:Q5HW78 STRING:Q5HW78
GeneID:3231200 KEGG:cjr:CJE0438 PATRIC:20042576
BioCyc:CJEJ195099:GJC0-443-MONOMER Uniprot:Q5HW78
Length = 411
Score = 218 (81.8 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 47/111 (42%), Positives = 68/111 (61%)
Query: 254 DLTKSI--AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVR 311
DL S+ A+R + + +G L +AAK +DLE W PG +RE+ S SNC D+Q+RR +R
Sbjct: 303 DLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIR 362
Query: 312 YGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKF 361
Y K K E VH LN ++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 363 Y---KNEQGKNELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
Score = 140 (54.3 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 72/276 (26%), Positives = 115/276 (41%)
Query: 5 LDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCSKVI 64
LDL + D +V K K++ + ++ K+ E ++ + + F F+N SK +
Sbjct: 2 LDLKNLQNNFD--EVAKKLKNKKVDENILKKLAELFASLKKEKIALEEFQAFQNKFSKEL 59
Query: 65 G-----EKMKAK-----EPVGDSSTLPG---NHL----H--PSVP---VSNNEDENGIVR 102
E +KAK + + S N L H P++P V EDEN V
Sbjct: 60 ATAEDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDENENVE 119
Query: 103 TKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYAL 157
K + K H +L ++ +D G ++ R LK L LV Y +
Sbjct: 120 LKKVLNPPSFDFTPK-EHFELGESLNWLDFIRGVKISQSRFCVLKNEGALLSRALVNYMI 178
Query: 158 SKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYL 217
+G+ + PF + M QL +F E++YKV D+ +D YL
Sbjct: 179 DFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKV--------------DD-EDLYL 223
Query: 218 IATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
I+TSE P+ ++ L +LPI+ S CFR+E
Sbjct: 224 ISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKE 259
>TIGR_CMR|NSE_0569 [details] [associations]
symbol:NSE_0569 "seryl-tRNA synthetase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=ISS] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0172 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 HOGENOM:HOG000035938 OMA:GPIRYAG
ProtClustDB:PRK05431 RefSeq:YP_506450.1 ProteinModelPortal:Q2GDJ6
STRING:Q2GDJ6 GeneID:3932062 KEGG:nse:NSE_0569 PATRIC:22681181
BioCyc:NSEN222891:GHFU-586-MONOMER Uniprot:Q2GDJ6
Length = 415
Score = 227 (85.0 bits), Expect = 4.3e-26, Sum P(3) = 4.3e-26
Identities = 49/121 (40%), Positives = 70/121 (57%)
Query: 249 CFRQEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRR 307
C + L K + YRVVN+ SG + + K D+E W P +RE+ SCSNC D+QSRR
Sbjct: 298 CIAEGLLQKLKLPYRVVNLCSGDIGFCSKKTYDIEVWIPSQCCYREISSCSNCGDFQSRR 357
Query: 308 LLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVY 366
L ++Y K +K F+H LNA++ A R I AILE +Q G + +P+ LR A +
Sbjct: 358 LAIKY----KFKKKKGFLHTLNASSLAIGRTIVAILENYQMHDGSIEVPEVLRSRFGADF 413
Query: 367 V 367
+
Sbjct: 414 I 414
Score = 122 (48.0 bits), Expect = 4.3e-26, Sum P(3) = 4.3e-26
Identities = 50/178 (28%), Positives = 80/178 (44%)
Query: 80 LPGNHLHPSVPVSNNEDENGIVRTKG---DTEVRKKYSHVDLITMIDGVDSEAGAIVAGG 136
LP N L VP+ +E N +V++ G D K +H +L + +D A V+G
Sbjct: 100 LP-NILAEDVPIGEDERSNVVVKSWGAVRDFGFEPK-AHDELGVALGILDFLNVAKVSGA 157
Query: 137 R-GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKV 195
R F+ A +V L + L E G+ + P+ ++++ M + QL +F +E +KV
Sbjct: 158 RFSGFIGSGARLFRV-LKDFMLEHNTEHGHREYFLPYLVKEDAMYKAGQLPKFSQESFKV 216
Query: 196 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
G G + L+ TSE + D++ E LP+R S CFR E
Sbjct: 217 DG-GMR---------------LVPTSEVSLLNFVSDNFYGETELPLRMTSYSECFRSE 258
Score = 37 (18.1 bits), Expect = 4.3e-26, Sum P(3) = 4.3e-26
Identities = 5/19 (26%), Positives = 14/19 (73%)
Query: 19 VRKNQKDRFKNVELVDKVI 37
+++N+ + F+ +++DK I
Sbjct: 61 IQENKSELFEKAKVIDKEI 79
>TIGR_CMR|SO_2310 [details] [associations]
symbol:SO_2310 "seryl-tRNA synthetase" species:211586
"Shewanella oneidensis MR-1" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:AE014299 GenomeReviews:AE014299_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
HOGENOM:HOG000035938 ProtClustDB:PRK05431 OMA:NTVRESI
RefSeq:NP_717905.1 ProteinModelPortal:Q8EEQ9 SMR:Q8EEQ9
GeneID:1170035 KEGG:son:SO_2310 PATRIC:23524243 Uniprot:Q8EEQ9
Length = 428
Score = 199 (75.1 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 235 PEASLPIRYLGVSTCFRQEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRE 293
PE S+ L V T + L + + YR V + +G + ++K D+E W PG +RE
Sbjct: 296 PEDSMAA--LEVLTGHAETVLQRLGLPYRTVVLCTGDMGFGSSKTYDIEVWLPGQNTYRE 353
Query: 294 LVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-V 352
+ SCSN D+Q+RR+ RY + K N+ + +H LN + A R + AILE +Q G V
Sbjct: 354 ISSCSNMKDFQARRMQARY-RVKADNKPV-LLHTLNGSGLAVGRTLVAILENYQNADGSV 411
Query: 353 RIPDCLRKFV 362
+P+ LR ++
Sbjct: 412 TVPEALRPYM 421
Score = 161 (61.7 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 88 SVPVSNNEDENGIVRTKGDT---EVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGP 144
S P+ +E EN VR G + K H+DL ++G+D ++ + G R +KG
Sbjct: 110 SAPIGADETENVEVRRWGSPRSFDFPIK-DHIDLGEGLNGLDFKSAVKITGSRFIVMKGQ 168
Query: 145 AVCLQVGLVQYALS-KWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVG 203
L L Q+ L E GYT Y P + + + QL +F E+L+
Sbjct: 169 IARLNRALGQFMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFH--------- 219
Query: 204 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+ P +E LI T+E P+ + RDS + E LPI+ + CFR E
Sbjct: 220 -TKPATEEGQGLSLIPTAEVPLTNLVRDSIVDEDELPIKLTAHTACFRSE 268
Score = 38 (18.4 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 14/66 (21%), Positives = 29/66 (43%)
Query: 66 EKMKAKEPVGDSSTLPGNHLHPSV--PVSNNEDENGIVRTKGDTEVRKKYSHVDLITMID 123
EK K+ + + N + S+ + ED + I+ GD + V+L +++
Sbjct: 35 EKRKSLQVATEELQASRNAISKSIGQAKARGEDVDAIMAQVGDLGAQLDAKKVELAAVLE 94
Query: 124 GVDSEA 129
V++ A
Sbjct: 95 EVNAIA 100
>SGD|S000001053 [details] [associations]
symbol:DIA4 "Probable mitochondrial seryl-tRNA synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0070158
"mitochondrial seryl-tRNA aminoacylation" evidence=IGI] [GO:0004828
"serine-tRNA ligase activity" evidence=IEA;IGI;ISA] [GO:0097056
"selenocysteinyl-tRNA(Sec) biosynthetic process" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase
activity" evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IGI]
[GO:0007124 "pseudohyphal growth" evidence=IMP] UniPathway:UPA00906
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 SGD:S000001053 GO:GO:0005739 GO:GO:0005524
GO:GO:0005759 EMBL:BK006934 GO:GO:0001403 EMBL:U10400 GO:GO:0007124
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
KO:K01875 GO:GO:0004828 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
GeneTree:ENSGT00660000095623 OrthoDB:EOG42FWSM EMBL:AY558105
PIR:S46786 RefSeq:NP_011875.1 ProteinModelPortal:P38705 SMR:P38705
DIP:DIP-5573N IntAct:P38705 MINT:MINT-534407 STRING:P38705
PaxDb:P38705 EnsemblFungi:YHR011W GeneID:856402 KEGG:sce:YHR011W
CYGD:YHR011w OMA:SEIVHAC NextBio:981937 Genevestigator:P38705
GermOnline:YHR011W GO:GO:0070158 Uniprot:P38705
Length = 446
Score = 232 (86.7 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 49/106 (46%), Positives = 67/106 (63%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I +V+N+ S L + A KK D+EAW PG G F E+ S SNC D+QSRRL +Y
Sbjct: 337 IPAKVLNMPSNDLGNPAFKKYDIEAWMPGRGKFGEISSASNCTDFQSRRLNTKYRDDN-- 394
Query: 319 NEKIEFVHMLNATACATTRVICAILET-HQTETG-VRIPDCLRKFV 362
K+E+VH LN TA A RVI A++E + TG + +P+CLR+F+
Sbjct: 395 TGKLEYVHTLNGTAMAIPRVIVALVENFYDPSTGKISVPECLREFM 440
Score = 113 (44.8 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 57/246 (23%), Positives = 114/246 (46%)
Query: 25 DRFKNVELVDKVIEN--------DLKWRQFRHKADNFNK-FKNLCSKVIGEKMKA---KE 72
+R++N++ +DKVI + + + ++ + K ++ K L + + K+ K+
Sbjct: 57 ERYQNIKEIDKVIADIQIQRKSIEAQIKKDKTKITEYSAALKALKEQYNDQNSKSSELKK 116
Query: 73 PVGDS-STLPGNHLHPSVPVSNNEDENGI--VRTKGDTEVRKKYSHVDLITMIDGVDSEA 129
+ ++ +LP N L P+VP+ + E I ++T +E + +HVD++ + +D +
Sbjct: 117 KILETCKSLP-NTLDPTVPLDAPQIEQWINPLKTHKTSEAQ---AHVDIMLKKNMLDLQT 172
Query: 130 GAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD 189
+ V G Y+L L+ LV YAL K E G++ P +KE++ F+
Sbjct: 173 ASNVTGMSWYYLLNDGARLEQALVAYALKKANENGFSSCVPPSITKKELIDACG----FN 228
Query: 190 EELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLP--EASLPIRYLGVS 247
+ + ++ A + L L+AT+E P+ + + L + +GVS
Sbjct: 229 P---RDMNNERQI--YALQDTNLG---LVATAEIPLAGLGANKVLELNSGECSKKLVGVS 280
Query: 248 TCFRQE 253
C+R E
Sbjct: 281 RCYRAE 286
>UNIPROTKB|P0A8L1 [details] [associations]
symbol:serS "seryl-tRNA synthetase" species:83333
"Escherichia coli K-12" [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0097056 "selenocysteinyl-tRNA(Sec) biosynthetic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0000287 "magnesium ion binding" evidence=IDA] [GO:0016260
"selenocysteine biosynthetic process" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006434
"seryl-tRNA aminoacylation" evidence=IEA;IDA] [GO:0004828
"serine-tRNA ligase activity" evidence=IEA;IDA] UniPathway:UPA00906
HAMAP:MF_00176 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005829 GO:GO:0005524 GO:GO:0000287
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:J03412 eggNOG:COG0172 GO:GO:0097056
EMBL:X05017 GO:GO:0016260 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 OMA:EESWEWH HOGENOM:HOG000035938
ProtClustDB:PRK05431 PIR:A26400 RefSeq:NP_415413.1
RefSeq:YP_489165.1 ProteinModelPortal:P0A8L1 SMR:P0A8L1
DIP:DIP-35989N IntAct:P0A8L1 MINT:MINT-1230011 SWISS-2DPAGE:P0A8L1
PaxDb:P0A8L1 PRIDE:P0A8L1 EnsemblBacteria:EBESCT00000001063
EnsemblBacteria:EBESCT00000015262 GeneID:12932491 GeneID:945506
KEGG:ecj:Y75_p0865 KEGG:eco:b0893 PATRIC:32116997 EchoBASE:EB0940
EcoGene:EG10947 BioCyc:EcoCyc:SERS-MONOMER
BioCyc:ECOL316407:JW0876-MONOMER BioCyc:MetaCyc:SERS-MONOMER
Genevestigator:P0A8L1 Uniprot:P0A8L1
Length = 430
Score = 187 (70.9 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 36/105 (34%), Positives = 58/105 (55%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
+ YR + + +G + A K DLE W P +RE+ SCSN D+Q+RR+ R K
Sbjct: 321 LPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARC--RSKS 378
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
++K VH LN + A R + A++E +Q G + +P+ LR ++
Sbjct: 379 DKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYM 423
Score = 151 (58.2 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 55/183 (30%), Positives = 83/183 (45%)
Query: 79 TLPGNHLHPSVPVSNNEDENGIVRTKG-----DTEVRKKYSHVDLITMIDGVDSEAGAIV 133
T+P N VPV +E++N V G D EVR HV L M G+D A +
Sbjct: 102 TIP-NLPADEVPVGKDENDNVEVSRWGTPREFDFEVR---DHVTLGEMHSGLDFAAAVKL 157
Query: 134 AGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQLAQFDEEL 192
G R +KG + L Q+ L E+ GY+ Y P+ + ++ + QL +F +L
Sbjct: 158 TGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDL 217
Query: 193 YKVIGKGEKVGDSAPEKDELD-DKY-LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 250
+ + P ++E D Y LI T+E P+ + R + E LPI+ + CF
Sbjct: 218 FH----------TRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCF 267
Query: 251 RQE 253
R E
Sbjct: 268 RSE 270
Score = 46 (21.3 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 2 VLDLDLFRTEKGGDPEKVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKNLCS 61
+LD +L R E EK+ + FK ++ VDK+ + + + + K +N +N S
Sbjct: 1 MLDPNLLRNEPDAVAEKLARRG---FK-LD-VDKLGALEERRKVLQVKTENLQAERNSRS 55
Query: 62 KVIGEKMKAK 71
K IG+ KA+
Sbjct: 56 KSIGQA-KAR 64
>POMBASE|SPAC25B8.06c [details] [associations]
symbol:SPAC25B8.06c "mitochondrial serine-tRNA ligase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004828
"serine-tRNA ligase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=ISS;IDA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006434 "seryl-tRNA aminoacylation" evidence=ISS] [GO:0032543
"mitochondrial translation" evidence=NAS] UniPathway:UPA00906
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862
PomBase:SPAC25B8.06c GO:GO:0005739 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005759 GO:GO:0032543
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 HSSP:Q9N0F3 PIR:T50193 RefSeq:NP_594466.2
STRING:Q9UTB2 EnsemblFungi:SPAC25B8.06c.1 GeneID:2541567
OrthoDB:EOG42FWSM NextBio:20802661 Uniprot:Q9UTB2
Length = 479
Score = 237 (88.5 bits), Expect = 8.4e-24, Sum P(2) = 8.4e-24
Identities = 52/123 (42%), Positives = 76/123 (61%)
Query: 250 FRQEDL-TKSIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRL 308
F++E + T I R++N+ + L +A++K D+EAW P ++ E+ S SNCL+YQ+RRL
Sbjct: 360 FQKEFVETLKIPARILNMPTAELGSSASQKYDIEAWMPARQSYGEITSASNCLEYQARRL 419
Query: 309 LVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 367
L RY K FVH LN TA A R+I AILE HQ E G V++P+ L ++ Y+
Sbjct: 420 LTRYRNDKDSG----FVHTLNGTAAAIPRLIIAILENHQQEDGTVKVPETLVPYIHKEYL 475
Query: 368 NEA 370
+A
Sbjct: 476 FKA 478
Score = 97 (39.2 bits), Expect = 8.4e-24, Sum P(2) = 8.4e-24
Identities = 28/100 (28%), Positives = 50/100 (50%)
Query: 80 LPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKKYSHVDLITMI-DGVDSEAGAIVAGGRG 138
+P L P+VPV ED+ +V+ G V+K S D + + +G++ E A +G
Sbjct: 153 VPNTTL-PTVPVGP-EDKAVVVQKIGSPLVKKTGSLKDHLQIANEGINLEDAAQASGHSF 210
Query: 139 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEV 178
+ G L++ + YA+ I KG+ P+ P +R ++
Sbjct: 211 CYTTGDIALLEMAITNYAMDFAISKGWCPVIPPTIVRTDI 250
>CGD|CAL0002761 [details] [associations]
symbol:orf19.1201 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0001403 "invasive growth in
response to glucose limitation" evidence=IEA] [GO:0007124
"pseudohyphal growth" evidence=IEA] [GO:0070158 "mitochondrial
seryl-tRNA aminoacylation" evidence=IEA] [GO:0004828 "serine-tRNA
ligase activity" evidence=IEA] InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 CGD:CAL0002761 GO:GO:0005524 GO:GO:0005737
eggNOG:COG0172 EMBL:AACQ01000161 EMBL:AACQ01000157 SUPFAM:SSF46589
KO:K01875 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 TIGRFAMs:TIGR00414 RefSeq:XP_712318.1
RefSeq:XP_712462.1 ProteinModelPortal:Q59RK3 STRING:Q59RK3
GeneID:3645924 GeneID:3646086 KEGG:cal:CaO19.1201
KEGG:cal:CaO19.8792 Uniprot:Q59RK3
Length = 496
Score = 202 (76.2 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 44/106 (41%), Positives = 66/106 (62%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
++ +++N+ S L A KK D+EAW PG G++ EL SCSNC DYQSRRL +RY ++
Sbjct: 384 LSAKLLNMPSSDLGAPAMKKYDIEAWMPGRGSWGELTSCSNCGDYQSRRLGIRYNDDQE- 442
Query: 319 NEKIEFVHMLNATACATTRVICAILETH-QTETG-VRIPDCLRKFV 362
+++ V LN T A RVI A++E + E + IP+ L+ F+
Sbjct: 443 -GRLKHVSTLNGTCMAVPRVIVALIEQNFNAEKNEISIPEVLQPFM 487
Score = 138 (53.6 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 64/236 (27%), Positives = 107/236 (45%)
Query: 32 LVDKVIENDLKWRQFRHKADNF-NKFKNLCSKV--IGEKMKAKEPVGDSSTLPGNHLHPS 88
L +++ N +QF+ + ++ K L +V I EK+ AK + +LP N + +
Sbjct: 120 LAERLKSNVGDLQQFKERLKQLKSELKPLEKQVKTIQEKIYAK-----AESLP-NLIDVT 173
Query: 89 VPVSNNEDE--NGI-VRTKGDTEVRKK---YSHVDLITMIDGVDSEAGAIVAGGRGYFLK 142
VP ++E I +++ D +V + H ++ + +D + V+G Y+L
Sbjct: 174 VPTDPLKEEVVQFINCQSEEDAKVSNSSAVHDHKEIGVNFNILDFSVASRVSGPSWYYLI 233
Query: 143 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKV 202
G L+ L+QYALSK +GY L P ++ E++ G K
Sbjct: 234 GDGALLEQALIQYALSKARRRGYLMLTPPSIVKSEIVGAC----------------GFKP 277
Query: 203 GDSAPEKD--EL--DDKYLIATSEQPICAVHRDSWLPEAS-LPIRYLGVSTCFRQE 253
D EK EL + K L T+E P+ A H + P + PI+Y+GVS +R E
Sbjct: 278 NDQNNEKQIYELKGEHKSLTGTAEIPLAAFHSSTVFPSGTQFPIKYVGVSRAYRAE 333
>FB|FBgn0021750 [details] [associations]
symbol:Aats-ser "Seryl-tRNA synthetase" species:7227
"Drosophila melanogaster" [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] [GO:0004828 "serine-tRNA ligase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 KO:K01875
GO:GO:0004828 GO:GO:0006434 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
GeneTree:ENSGT00660000095623 FlyBase:FBgn0021750 HSSP:P34945
EMBL:AY119252 RefSeq:NP_524365.1 UniGene:Dm.2420 SMR:Q9VF85
IntAct:Q9VF85 MINT:MINT-884159 STRING:Q9VF85
EnsemblMetazoa:FBtr0083086 GeneID:41862 KEGG:dme:Dmel_CG4938
UCSC:CG4938-RA CTD:41862 InParanoid:Q9VF85 OMA:DMPPCEL
GenomeRNAi:41862 NextBio:825976 Uniprot:Q9VF85
Length = 417
Score = 208 (78.3 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 42/102 (41%), Positives = 64/102 (62%)
Query: 261 YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE 320
+R++++ L A +K D+EAW PG + E+ SCSNC DYQ+RRL +RY + +
Sbjct: 295 FRLLDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRY--RRSADG 352
Query: 321 KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFV 362
+I H +N TA A R++ A+LE++Q E G+ IP LR F+
Sbjct: 353 QILHAHTINGTATAIPRLLIALLESYQKEDGIEIPAVLRPFM 394
Score = 114 (45.2 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 49/212 (23%), Positives = 87/212 (41%)
Query: 47 RHKADNFNKFKNLCSKV-IGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDEN--GIVRT 103
RH +N ++L ++ G++ K ++ + LP N HP + E V
Sbjct: 51 RHHKNNVPLIRSLIQELDAGDQHKLRQLQAELEQLP-NATHPRLRDYGEEPRELAQYVHR 109
Query: 104 KGDTEVR-KKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIE 162
+ + R K++S + + +D G + Y+L G L+ ++QYAL E
Sbjct: 110 QLTPQSRLKEFSELARALNLYRMDHLGN--YTGHKSYYLTGQLATLEQAIIQYALQAVTE 167
Query: 163 KGYTPLYTPFFMRKEVMQEVAQLAQFDE-ELYKVIGKGEKVGDSAPEKDELDDKYLIATS 221
G+ + P + KEV++ + + ++YK + GE L TS
Sbjct: 168 HGFKLISVPDILPKEVIESCGMRTEGERTQVYK-LDTGE---------------CLSGTS 211
Query: 222 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
E + + L E LP++ VS C+R E
Sbjct: 212 EMALAGFFANKLLSEDQLPLKVTAVSRCYRAE 243
>TIGR_CMR|ECH_0584 [details] [associations]
symbol:ECH_0584 "seryl-tRNA synthetase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005737 EMBL:CP000236 GenomeReviews:CP000236_GR
eggNOG:COG0172 GO:GO:0097056 GO:GO:0016260 SUPFAM:SSF46589
KO:K01875 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HOGENOM:HOG000035938
ProtClustDB:PRK05431 OMA:NTVRESI RefSeq:YP_507395.2
ProteinModelPortal:Q2GGN8 STRING:Q2GGN8 GeneID:3927953
KEGG:ech:ECH_0584 PATRIC:20576628
BioCyc:ECHA205920:GJNR-586-MONOMER Uniprot:Q2GGN8
Length = 426
Score = 204 (76.9 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 45/114 (39%), Positives = 68/114 (59%)
Query: 253 EDLTK--SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLV 310
E++ K + YRV+ + +G + +A+ D+E W P +RE+ SCSNC +Q+RR+
Sbjct: 307 EEILKRLELPYRVMMLCTGDMGFSASITYDIEVWIPSQNQYREISSCSNCKAFQARRMNT 366
Query: 311 RYGQTKKMNEKI-EFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
+Y T N K+ +FVH LN +A A R I AILE +Q G + IP LRK++
Sbjct: 367 KY-TTIINNVKVSKFVHTLNGSALAIGRTIIAILENYQNRDGSITIPHILRKYM 419
Score = 101 (40.6 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 47/202 (23%), Positives = 85/202 (42%)
Query: 57 KNLCSKV--IGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGD-TEVRKKY 113
KN+ SK+ I +K + + + N VP+ +E+ N +R G+ T
Sbjct: 79 KNVTSKINDINNMIKEDSQLVNLLNMLPNIPDERVPIGKDENSNVELRRHGNKTSFDFPI 138
Query: 114 -SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTP 171
+H +L ++ +D + A ++G R LK L L + L ++ GY+ + P
Sbjct: 139 KTHYELGENLNLMDFKQAAKLSGSRFVILKNQLAQLDRALSNFMLDIHTKEFGYSEISHP 198
Query: 172 FFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRD 231
+ + M V QL +F ++ +K ++ LI TSE + + +
Sbjct: 199 ILVHESAMYGVGQLPKFADDSFKTT----------------ENFRLIPTSEVALTNLVSN 242
Query: 232 SWLPEASLPIRYLGVSTCFRQE 253
+ LP+R+ S CFR E
Sbjct: 243 MNINGCDLPLRFTACSPCFRSE 264
Score = 44 (20.5 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 28 KNVELV-DKVIENDLKWRQFRHKADNFNKFKNLCSKVIGEKMK 69
+N E V K+IE D+K R + + K +N ++ I EK+K
Sbjct: 24 RNSEKVAKKIIELDVKKRHLLTQLYSLQKERNQITQEI-EKLK 65
>TIGR_CMR|SPO_2325 [details] [associations]
symbol:SPO_2325 "seryl-tRNA synthetase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004828 "serine-tRNA ligase activity"
evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation" evidence=ISS]
UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 OMA:KERNNIT
HOGENOM:HOG000035938 ProtClustDB:PRK05431 RefSeq:YP_167548.1
ProteinModelPortal:Q5LR07 GeneID:3194584 KEGG:sil:SPO2325
PATRIC:23378013 Uniprot:Q5LR07
Length = 430
Score = 176 (67.0 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 37/105 (35%), Positives = 56/105 (53%)
Query: 259 IAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKM 318
I YR + + +G + A + D+EAW PG +RE+ S S C D+Q+RR+ R+
Sbjct: 315 IPYRTIVLCTGDMGFGARRTYDIEAWLPGQNTYREISSVSTCGDFQARRMNARFKPAD-- 372
Query: 319 NEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
K +FVH LN + A R + A+LE Q G V +P L ++
Sbjct: 373 GGKPQFVHTLNGSGLAVGRCLIAVLENGQNADGSVTLPQALAPYL 417
Score = 128 (50.1 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 42/140 (30%), Positives = 61/140 (43%)
Query: 115 HVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFF 173
H DL ++ DG+D E A ++G R L G + L Q+ L E+ G T + P
Sbjct: 141 HFDLASVQDGMDFETAAKLSGARFVLLSGAVARIHRALAQFMLDTHSEQNGLTEVNGPVL 200
Query: 174 MRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 233
+ E+M QL +F E+ Y+ + +LI TSE + + S
Sbjct: 201 VLSEMMYGTGQLPKFGEDSYQT----------------REGWWLIPTSEVSLTNIVNGST 244
Query: 234 LPEASLPIRYLGVSTCFRQE 253
+ E LP RY S CFR E
Sbjct: 245 IAEDYLPRRYTAHSLCFRSE 264
>DICTYBASE|DDB_G0267604 [details] [associations]
symbol:mserS "serine-tRNA ligase, mitochondrial"
species:44689 "Dictyostelium discoideum" [GO:0006434 "seryl-tRNA
aminoacylation" evidence=IEA;ISS] [GO:0006418 "tRNA aminoacylation
for protein translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004828
"serine-tRNA ligase activity" evidence=IEA;ISS] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISS] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 dictyBase:DDB_G0267604 GO:GO:0005739 GO:GO:0005524
GenomeReviews:CM000150_GR EMBL:AAFI02000003 eggNOG:COG0172
SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
RefSeq:XP_647158.1 ProteinModelPortal:Q55GM6
EnsemblProtists:DDB0231306 GeneID:8615961 KEGG:ddi:DDB_G0267604
InParanoid:Q55GM6 OMA:QTERNAN ProtClustDB:CLSZ2431509
Uniprot:Q55GM6
Length = 525
Score = 129 (50.5 bits), Expect = 3.6e-19, Sum P(4) = 3.6e-19
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 261 YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNE 320
+RV+++ S L A +K D+E W P + E+ S SNC DYQS+RL ++Y TK +
Sbjct: 375 FRVLDMPSEDLGAPAYRKYDIEVWIPSKQEYGEISSASNCTDYQSKRLNIKYQSTKDDFQ 434
Query: 321 KIEFV 325
+FV
Sbjct: 435 IQQFV 439
Score = 114 (45.2 bits), Expect = 3.6e-19, Sum P(4) = 3.6e-19
Identities = 51/190 (26%), Positives = 84/190 (44%)
Query: 72 EPVGDSSTLPGNHLHPSVPVSNNEDENGIVRTKGDTEVRKK-----YSHVDLITMIDGVD 126
E ++ +P N+ HPSVP+ + N I++ G+ K H++L + GV
Sbjct: 153 EITSEALKIP-NNTHPSVPIGAESNAN-IIKMVGEKPNYLKPDEPIKDHLELGESL-GVI 209
Query: 127 SEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEK-GYTPLYTPFFMRKEVMQEVAQL 185
A G + Y+ L++ L +A SK K G+ + TP + + +
Sbjct: 210 RSASK-TTGHKYYYFTREGAMLEMALSYWAFSKLTYKYGFQSVITPDLIHPNLAEACGFH 268
Query: 186 AQFD-EELYKVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVH-RDSWLPEASLPIRY 243
A+ D ++L+ + KD D L ATSE P+ ++ + L A LPI+
Sbjct: 269 ARSDADQLFWI-------------KDR--DLCLSATSEIPLAGMYANEEPLQSAELPIKM 313
Query: 244 LGVSTCFRQE 253
+G S CFR E
Sbjct: 314 VGYSHCFRPE 323
Score = 92 (37.4 bits), Expect = 3.6e-19, Sum P(4) = 3.6e-19
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 324 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 362
F H LN TACA R+I AILE +Q G V IP L+ F+
Sbjct: 474 FTHTLNGTACAIPRLILAILENNQQSDGSVLIPKVLQPFM 513
Score = 47 (21.6 bits), Expect = 3.6e-19, Sum P(4) = 3.6e-19
Identities = 14/47 (29%), Positives = 28/47 (59%)
Query: 18 KVRKNQKDRFKNVELVDKVIENDLKWRQFRHKADNFNKFKN-LCSKV 63
++++N R VEL +K+I+N ++R + + D F +N + SK+
Sbjct: 66 QIKENIIKRKSPVEL-EKLIKNYDEYRIIKKELDTFRAKRNEIASKM 111
>GENEDB_PFALCIPARUM|PFL0770w [details] [associations]
symbol:PFL0770w "seryl-tRNA synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=ISS] UniPathway:UPA00906 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 Pfam:PF00587 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005829 GO:GO:0005739 GO:GO:0005524
GO:GO:0016020 EMBL:AE014188 GO:GO:0020011 eggNOG:COG0172
HOGENOM:HOG000035937 GO:GO:0097056 KO:K01875 GO:GO:0004828
GO:GO:0006434 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HSSP:Q9N0F3
RefSeq:XP_001350563.1 ProteinModelPortal:Q8I5P7
EnsemblProtists:PFL0770w:mRNA GeneID:811207 KEGG:pfa:PFL0770w
EuPathDB:PlasmoDB:PF3D7_1216000 ProtClustDB:CLSZ2431855
Uniprot:Q8I5P7
Length = 618
Score = 175 (66.7 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 40/112 (35%), Positives = 65/112 (58%)
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
+I YR+V + S ++A+ D+EAW P + E+ SCSNCLD+Q+RRL ++Y K
Sbjct: 501 NIPYRLVLLNSIETPYSASICYDIEAWLPSQQRYVEVSSCSNCLDFQARRLNLKY----K 556
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTE-------TGVRIPDCLRKFV 362
+ + F H +N + A RV+ ILE +Q + T +++P LRK++
Sbjct: 557 IKDSNNFCHTINGSGLAVGRVLAIILEQYQIKKKHKNEITKIQVPKVLRKYM 608
Score = 126 (49.4 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 65/276 (23%), Positives = 119/276 (43%)
Query: 3 LDLDLFRTEKGGDPEKVRK-NQKDRFKNVELV-------------DKVIENDLKWRQFRH 48
+D + +TEK D + + K NQK R+ N E D + +N ++ + +
Sbjct: 188 VDEEKKKTEKKNDTQDILKDNQKIRYINKENQATNNNINNQDNSNDVLKKNKIQIEEIKK 247
Query: 49 KADNFNK-FKNLCSKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRT-KGD 106
+ + NK ++ +I K K + + LP N L VP ++N I++ K +
Sbjct: 248 ETNQINKDIDHIEMNIINLKKKIEFNL---YKLP-NILLNKVPKGKTTEDNKIIKFYKKE 303
Query: 107 TEVRKKYSHVDLITMIDGVDS--EAGAIVAG-----GRGY-FLKGPAVCLQVGLVQYALS 158
++ D I + + E I + G GY L L+ L+ + ++
Sbjct: 304 NIIQLNNEEYDFIEPHEEIIKKYENNFIFSNISNKIGFGYNILVNDIAKLERALIDFMIN 363
Query: 159 KWIEKG-YTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYL 217
+ K YT + P + K + QL +F+E+L+K+ + + + D YL
Sbjct: 364 THVNKFLYTYVKAPEIVTKSALFNTGQLPKFEEDLFKITDNYKLLNE---------DAYL 414
Query: 218 IATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
I TSE + + ++S + LPI+ + S+CFR E
Sbjct: 415 IPTSEVSLLNLFKNSQIDYIHLPIKLVSHSSCFRTE 450
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 231 DSWLPEASLPIRYLGVSTC 249
++WLP RY+ VS+C
Sbjct: 525 EAWLPSQQ---RYVEVSSC 540
>UNIPROTKB|Q8I5P7 [details] [associations]
symbol:PFL0770w "Serine--tRNA ligase, cytoplasmic"
species:36329 "Plasmodium falciparum 3D7" [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=NAS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006434
"seryl-tRNA aminoacylation" evidence=ISS] [GO:0016020 "membrane"
evidence=NAS] [GO:0020011 "apicoplast" evidence=ISS]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 Pfam:PF00587 PRINTS:PR00981 PROSITE:PS50862
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 GO:GO:0016020
EMBL:AE014188 GO:GO:0020011 eggNOG:COG0172 HOGENOM:HOG000035937
GO:GO:0097056 KO:K01875 GO:GO:0004828 GO:GO:0006434
PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HSSP:Q9N0F3
RefSeq:XP_001350563.1 ProteinModelPortal:Q8I5P7
EnsemblProtists:PFL0770w:mRNA GeneID:811207 KEGG:pfa:PFL0770w
EuPathDB:PlasmoDB:PF3D7_1216000 ProtClustDB:CLSZ2431855
Uniprot:Q8I5P7
Length = 618
Score = 175 (66.7 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 40/112 (35%), Positives = 65/112 (58%)
Query: 258 SIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKK 317
+I YR+V + S ++A+ D+EAW P + E+ SCSNCLD+Q+RRL ++Y K
Sbjct: 501 NIPYRLVLLNSIETPYSASICYDIEAWLPSQQRYVEVSSCSNCLDFQARRLNLKY----K 556
Query: 318 MNEKIEFVHMLNATACATTRVICAILETHQTE-------TGVRIPDCLRKFV 362
+ + F H +N + A RV+ ILE +Q + T +++P LRK++
Sbjct: 557 IKDSNNFCHTINGSGLAVGRVLAIILEQYQIKKKHKNEITKIQVPKVLRKYM 608
Score = 126 (49.4 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 65/276 (23%), Positives = 119/276 (43%)
Query: 3 LDLDLFRTEKGGDPEKVRK-NQKDRFKNVELV-------------DKVIENDLKWRQFRH 48
+D + +TEK D + + K NQK R+ N E D + +N ++ + +
Sbjct: 188 VDEEKKKTEKKNDTQDILKDNQKIRYINKENQATNNNINNQDNSNDVLKKNKIQIEEIKK 247
Query: 49 KADNFNK-FKNLCSKVIGEKMKAKEPVGDSSTLPGNHLHPSVPVSNNEDENGIVRT-KGD 106
+ + NK ++ +I K K + + LP N L VP ++N I++ K +
Sbjct: 248 ETNQINKDIDHIEMNIINLKKKIEFNL---YKLP-NILLNKVPKGKTTEDNKIIKFYKKE 303
Query: 107 TEVRKKYSHVDLITMIDGVDS--EAGAIVAG-----GRGY-FLKGPAVCLQVGLVQYALS 158
++ D I + + E I + G GY L L+ L+ + ++
Sbjct: 304 NIIQLNNEEYDFIEPHEEIIKKYENNFIFSNISNKIGFGYNILVNDIAKLERALIDFMIN 363
Query: 159 KWIEKG-YTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYL 217
+ K YT + P + K + QL +F+E+L+K+ + + + D YL
Sbjct: 364 THVNKFLYTYVKAPEIVTKSALFNTGQLPKFEEDLFKITDNYKLLNE---------DAYL 414
Query: 218 IATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
I TSE + + ++S + LPI+ + S+CFR E
Sbjct: 415 IPTSEVSLLNLFKNSQIDYIHLPIKLVSHSSCFRTE 450
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 231 DSWLPEASLPIRYLGVSTC 249
++WLP RY+ VS+C
Sbjct: 525 EAWLPSQQ---RYVEVSSC 540
>ASPGD|ASPL0000036378 [details] [associations]
symbol:sgdB species:162425 "Emericella nidulans"
[GO:0009847 "spore germination" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IEA] [GO:0007124 "pseudohyphal growth" evidence=IEA]
[GO:0070158 "mitochondrial seryl-tRNA aminoacylation" evidence=IEA]
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 HOGENOM:HOG000035937 SUPFAM:SSF46589
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 EnsemblFungi:CADANIAT00009970 OMA:RSHVHIG
Uniprot:C8VIL4
Length = 478
Score = 154 (59.3 bits), Expect = 8.8e-19, Sum P(2) = 8.8e-19
Identities = 45/141 (31%), Positives = 69/141 (48%)
Query: 114 SHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFF 173
SHV + T + +D + A G YFL G L+ L+QY+LS G+TP+ P
Sbjct: 172 SHVSIGTDLGLIDFTSAATTTGWGWYFLTGDGALLEQALIQYSLSVARRHGWTPISPPSI 231
Query: 174 MRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDD-KYLIATSEQPICAVHRDS 232
+ + E D+ + I E+ EKD+ + L AT+E P+ A+H +
Sbjct: 232 VWS-YLTEACGFQPRDQNNEQQIWAIEQA-----EKDKAKPPRSLAATAEIPLAAMHARN 285
Query: 233 WLPEASLPIRYLGVSTCFRQE 253
L A+LPI+ +G S C+R E
Sbjct: 286 ELDPAALPIKLVGPSRCYRAE 306
Score = 145 (56.1 bits), Expect = 8.8e-19, Sum P(2) = 8.8e-19
Identities = 51/141 (36%), Positives = 73/141 (51%)
Query: 235 PEASLPIR---YLGVSTCFRQEDLTK-SIAYRVVNIVSGALNHAAAKKLDLEAWFP---- 286
P +S P + G+ T ++E LT + R++ + + L +A +K D+EA FP
Sbjct: 336 PTSSSPTSDDLFEGLLTV-QKEILTSLQLPCRILEMPTSDLGASATRKRDIEALFPSRMR 394
Query: 287 GSG---AFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAIL 343
G+G A+ E+ S S C DYQSRRL R K + F H +N TA A RV+ AIL
Sbjct: 395 GNGLEDAWGEVTSASICTDYQSRRLGTRVRGVKSV-----FPHTVNGTAVAVPRVLAAIL 449
Query: 344 ETH-QTETGVRI-PDCLRKFV 362
E E V + P+ LR F+
Sbjct: 450 ENGWDAERKVVVLPEVLRPFM 470
>WB|WBGene00005662 [details] [associations]
symbol:sars-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040010 KO:K01875 GO:GO:0004828 GO:GO:0006434
PANTHER:PTHR11778 GeneTree:ENSGT00660000095623 EMBL:FO081480
EMBL:AB016796 PIR:T34480 RefSeq:NP_500549.1 UniGene:Cel.19595
ProteinModelPortal:G5EF77 SMR:G5EF77 EnsemblMetazoa:W03B1.4
GeneID:177200 KEGG:cel:CELE_W03B1.4 CTD:177200 WormBase:W03B1.4
OMA:RCFRTEI NextBio:895760 Uniprot:G5EF77
Length = 441
Score = 188 (71.2 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 42/103 (40%), Positives = 63/103 (61%)
Query: 262 RVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEK 321
R + + S L +AA+K D+EAW PG + E+ S SNC D+QSRRL ++Y K +
Sbjct: 326 RQLEMPSEELGASAARKFDIEAWMPGRKLYGEVSSASNCTDFQSRRLGIKY---KTADGT 382
Query: 322 IEFVHMLNATACATTRVICAILETHQTET-GV-RIPDCLRKFV 362
++ H N TA A+TR + ++LET Q + G+ +P+ LRK V
Sbjct: 383 TKYAHTCNGTALASTRALISVLETFQNDKKGLGELPEPLRKRV 425
Score = 105 (42.0 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 56/227 (24%), Positives = 89/227 (39%)
Query: 42 KWRQFRHKADNFNKFKNLCSKVIGEKMKAK-EPVGDSSTLPGNHLHPSVPVSNNEDENGI 100
KW + + K N V +K K + + D + L N VP +ED+ I
Sbjct: 78 KWAVIQKMMKSGEKQTN--GAVSEQKYKQLWDELYDEAILIPNMTQDGVP-RGSEDQAKI 134
Query: 101 VRTKGDTEVRKKYSHVDLITMIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW 160
V G+ + + L+ + A +G R Y G L+ L+ YA +
Sbjct: 135 VAEWGEKREDECLTAEKLVQTWRSLLHPTDA--SGQRSYVFLGALASLEKALLDYAHERV 192
Query: 161 IEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKVIGKGEKVGDSAPEKDELDDKYLIAT 220
G+ P+ P + EV Q + + D + + G+ + K L T
Sbjct: 193 CALGFRPITVPDIVSGEVTQACGVMQRSDHPIQYTLA-----GEESHTK-------LSGT 240
Query: 221 SEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEDLTKSIA----YRV 263
+E I A R + LPIR + +S CFR E ++KS + YRV
Sbjct: 241 AEMGIAAFLRGRTFNQDQLPIRLVSLSRCFRTE-ISKSASEAKLYRV 286
>UNIPROTKB|F1RI32 [details] [associations]
symbol:FBXO17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
SUPFAM:SSF46589 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 GeneTree:ENSGT00660000095623 EMBL:FP565352
Ensembl:ENSSSCT00000003297 OMA:MVRRLWP Uniprot:F1RI32
Length = 510
Score = 166 (63.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 49/177 (27%), Positives = 79/177 (44%)
Query: 80 LPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGR 137
LP N HP VPV + E + ++ GD + H+ L +D + + + V+G R
Sbjct: 170 LP-NQTHPDVPVGD-ESQARVLHVVGDKPAFSFQPRGHLQLAENLDIIRQKRLSHVSGHR 227
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD-EELYKVI 196
Y+L+G LQ GLV + L K I +G+TP+ P +R V + + ++Y +
Sbjct: 228 SYYLRGAGALLQHGLVNFTLQKLIHRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNI- 286
Query: 197 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 253
+ +D L T+E + D + LPIR + STC+R E
Sbjct: 287 -----------DPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAE 332
>UNIPROTKB|Q58CS4 [details] [associations]
symbol:SARS2 "Seryl-tRNA synthetase 2" species:9913 "Bos
taurus" [GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] InterPro:IPR002317 InterPro:IPR010978
InterPro:IPR015866 GO:GO:0005524 GO:GO:0005737 HOGENOM:HOG000035937
SUPFAM:SSF46589 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 UniGene:Bt.8850 GeneTree:ENSGT00660000095623
EMBL:DAAA02047041 EMBL:BT021873 IPI:IPI00703583 SMR:Q58CS4
STRING:Q58CS4 Ensembl:ENSBTAT00000032066 Uniprot:Q58CS4
Length = 301
Score = 142 (55.0 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 33/103 (32%), Positives = 55/103 (53%)
Query: 80 LPGNHLHPSVPVSNNEDENGIVRTKGDTEVR--KKYSHVDLITMIDGVDSEAGAIVAGGR 137
LP N HP VPV + E + ++ GD + H+++ +D + + + V+G R
Sbjct: 170 LP-NQTHPDVPVGD-ESQARVLHVVGDKPAFSFQPRGHLEIAEKLDIIRQKRLSHVSGHR 227
Query: 138 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQ 180
Y+L+G LQ GLV + L+K I +G+TP+ P +R V +
Sbjct: 228 SYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLLRGVVFE 270
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 399 382 0.00091 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 616 (65 KB)
Total size of DFA: 256 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:09
No. of threads or processors used: 24
Search cpu time: 33.92u 0.10s 34.02t Elapsed: 00:00:22
Total cpu time: 33.94u 0.10s 34.04t Elapsed: 00:00:31
Start: Thu Aug 15 12:05:21 2013 End: Thu Aug 15 12:05:52 2013