BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10038
(51 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54690|BCAT1_RAT Branched-chain-amino-acid aminotransferase, cytosolic OS=Rattus
norvegicus GN=Bcat1 PE=1 SV=1
Length = 411
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLSREKR 51
E+ TP LDG+ILPG+TR SILEL +W ++KV ER ITM D+ E R
Sbjct: 300 ELATPPLDGVILPGVTRQSILELGEEWGEFKVCERHITMDDLSTALEENR 349
>sp|P54687|BCAT1_HUMAN Branched-chain-amino-acid aminotransferase, cytosolic OS=Homo
sapiens GN=BCAT1 PE=1 SV=3
Length = 386
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDI 43
E+ TP LDG+ILPG+TR IL+L+HQW ++KV+ER +TM D+
Sbjct: 275 ELATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDL 316
>sp|Q9GKM4|BCAT1_SHEEP Branched-chain-amino-acid aminotransferase, cytosolic OS=Ovis aries
GN=BCAT1 PE=2 SV=1
Length = 385
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLSREKR 51
E+ TP LDG+ILPG+ R SIL+L+H+W ++KV+ER +TM D+ E R
Sbjct: 274 ELATPPLDGIILPGVMRQSILDLAHKWGEFKVSERYLTMDDLTTAVEENR 323
>sp|P24288|BCAT1_MOUSE Branched-chain-amino-acid aminotransferase, cytosolic OS=Mus
musculus GN=Bcat1 PE=2 SV=2
Length = 386
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDI 43
E+ TP LDG+ILPG+TR SILEL+ QW ++KV ER +TM D+
Sbjct: 275 ELATPPLDGIILPGVTRQSILELAQQWGEFKVCERHLTMDDL 316
>sp|A9UZ24|BCAT_MONBE Branched-chain-amino-acid aminotransferase OS=Monosiga brevicollis
GN=37018 PE=3 SV=1
Length = 390
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLSREKR 51
E+ITP LDG ILPG+TR SI++++ WN++KV+ERK M + + +E R
Sbjct: 278 ELITPPLDGTILPGVTRQSIVDMARGWNEFKVSERKFNMGQVSRALKEGR 327
>sp|A7SLW1|BCAT_NEMVE Branched-chain-amino-acid aminotransferase OS=Nematostella
vectensis GN=v1g246094 PE=3 SV=1
Length = 405
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLSREKR 51
E++TP L+GLILPG+TR S+L L+ +W ++KVTER M D++ + E R
Sbjct: 293 ELVTPPLNGLILPGVTRDSLLALAKRWGEFKVTERTFNMQDVLMATEENR 342
>sp|Q5EA40|BCAT2_BOVIN Branched-chain-amino-acid aminotransferase, mitochondrial OS=Bos
taurus GN=BCAT2 PE=2 SV=1
Length = 393
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 39/51 (76%)
Query: 1 MEMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLSREKR 51
+E++TP LDG+ILPGI R S+L+L+ W +++V ERKITM + ++ ++ R
Sbjct: 282 LELVTPPLDGIILPGIVRQSLLDLARTWGEFRVVERKITMKEFLRALKDGR 332
>sp|Q54N47|BCAT_DICDI Branched-chain-amino-acid aminotransferase OS=Dictyostelium
discoideum GN=bcaA PE=3 SV=1
Length = 378
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 2 EMITPTL-DGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLSREKR 51
E+ITP L DG ILPG+TR SIL+L+ QW ++K+TE+ TM ++ + +E R
Sbjct: 264 ELITPPLGDGTILPGVTRDSILKLTQQWGEFKITEKNFTMTELAKAIKEGR 314
>sp|P54688|BCAT_CAEEL Branched-chain-amino-acid aminotransferase, cytosolic
OS=Caenorhabditis elegans GN=bcat-1 PE=2 SV=2
Length = 415
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 1 MEMITPTLD-GLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLSREKR 51
ME+ITP L GLILPG+TR S+LEL +W +YKVTER + M ++ + EKR
Sbjct: 296 MELITPPLHRGLILPGVTRDSLLELGREWGEYKVTERTLNMEEVKKALSEKR 347
>sp|O35855|BCAT2_MOUSE Branched-chain-amino-acid aminotransferase, mitochondrial OS=Mus
musculus GN=Bcat2 PE=2 SV=2
Length = 393
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 38/51 (74%)
Query: 1 MEMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLSREKR 51
+E++TP L+G+ILPG+ R S+L+L+ W +++V ERK+TM ++ + E R
Sbjct: 282 LELVTPPLNGVILPGVVRQSLLDLARTWGEFRVAERKVTMKELKRALEEGR 332
>sp|O35854|BCAT2_RAT Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus
norvegicus GN=Bcat2 PE=1 SV=1
Length = 393
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 1 MEMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLSREKR 51
+E+ TP LDG+ILPG+ R S+L+L+ W +++V ERK+TM ++ + E R
Sbjct: 282 LELATPPLDGIILPGVVRQSLLDLARTWGEFRVAERKVTMKELKRALEEGR 332
>sp|Q5REP0|BCAT2_PONAB Branched-chain-amino-acid aminotransferase, mitochondrial OS=Pongo
abelii GN=BCAT2 PE=2 SV=1
Length = 392
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 1 MEMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLSREKR 51
+E++TP L+G+ILPG+ R S+L+L+ W +++V ER IT ++Q E R
Sbjct: 281 LELVTPPLNGVILPGVVRQSLLDLAQTWGEFRVVERTITTKQLLQALEEGR 331
>sp|O15382|BCAT2_HUMAN Branched-chain-amino-acid aminotransferase, mitochondrial OS=Homo
sapiens GN=BCAT2 PE=1 SV=2
Length = 392
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 37/51 (72%)
Query: 1 MEMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLSREKR 51
+E++TP L+G+ILPG+ R S+L+++ W +++V ER ITM +++ E R
Sbjct: 281 LELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGR 331
>sp|O14370|BCA1_SCHPO Branched-chain-amino-acid aminotransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=eca39 PE=1 SV=3
Length = 427
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQW---NDYKVTERKITMPDIVQLSREKR 51
E+IT LDG+ILPG+TR SILE+ + +K+TE K +M ++ Q S+E R
Sbjct: 309 EIITAPLDGMILPGVTRDSILEICRERLAPKGWKITEGKYSMKEVAQASKEGR 361
>sp|P63513|ILVE_STAAW Probable branched-chain-amino-acid aminotransferase
OS=Staphylococcus aureus (strain MW2) GN=ilvE PE=3 SV=1
Length = 358
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQ 45
++ITP L+G ILPGITR SI+EL+ Y+V ER++++ ++ +
Sbjct: 245 KVITPELNGSILPGITRKSIIELAKNLG-YEVEERRVSIDELFE 287
>sp|Q6GBT3|ILVE_STAAS Probable branched-chain-amino-acid aminotransferase
OS=Staphylococcus aureus (strain MSSA476) GN=ilvE PE=3
SV=1
Length = 358
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQ 45
++ITP L+G ILPGITR SI+EL+ Y+V ER++++ ++ +
Sbjct: 245 KVITPELNGSILPGITRKSIIELAKNLG-YEVEERRVSIDELFE 287
>sp|Q6GJB4|ILVE_STAAR Probable branched-chain-amino-acid aminotransferase
OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3
SV=1
Length = 358
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQ 45
++ITP L+G ILPGITR SI+EL+ Y+V ER++++ ++ +
Sbjct: 245 KVITPELNGSILPGITRKSIIELAKNLG-YEVEERRVSIDELFE 287
>sp|P99138|ILVE_STAAN Probable branched-chain-amino-acid aminotransferase
OS=Staphylococcus aureus (strain N315) GN=ilvE PE=1 SV=1
Length = 358
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQ 45
++ITP L+G ILPGITR SI+EL+ Y+V ER++++ ++ +
Sbjct: 245 KVITPELNGSILPGITRKSIIELAKNLG-YEVEERRVSIDELFE 287
>sp|P63512|ILVE_STAAM Probable branched-chain-amino-acid aminotransferase
OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=ilvE PE=1 SV=1
Length = 358
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQ 45
++ITP L+G ILPGITR SI+EL+ Y+V ER++++ ++ +
Sbjct: 245 KVITPELNGSILPGITRKSIIELAKNLG-YEVEERRVSIDELFE 287
>sp|Q5HIC1|ILVE_STAAC Probable branched-chain-amino-acid aminotransferase
OS=Staphylococcus aureus (strain COL) GN=ilvE PE=3 SV=1
Length = 358
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQ 45
++ITP L+G ILPGITR SI+EL+ Y+V ER++++ ++ +
Sbjct: 245 KVITPELNGSILPGITRKSIIELAKNLG-YEVEERRVSIDELFE 287
>sp|P39576|ILVE2_BACSU Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis
(strain 168) GN=ilvK PE=1 SV=5
Length = 363
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLSRE 49
E++TP L+G IL GITR S++ L W +V+ERKI + +++Q ++
Sbjct: 246 EIVTPMLNGSILEGITRNSVIALLKHWG-LQVSERKIAIDEVIQAHKD 292
>sp|Q8CQ78|ILVE_STAES Probable branched-chain-amino-acid aminotransferase
OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=ilvE PE=3 SV=1
Length = 358
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDI 43
+++TP L+G ILPGITR SI++L+ Y+V ER++++ ++
Sbjct: 245 KVVTPALNGSILPGITRKSIIQLAEDLG-YEVEERRVSIEEL 285
>sp|Q5HRJ8|ILVE_STAEQ Probable branched-chain-amino-acid aminotransferase
OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=ilvE PE=3 SV=1
Length = 358
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDI 43
+++TP L+G ILPGITR SI++L+ Y+V ER++++ ++
Sbjct: 245 KVVTPALNGSILPGITRKSIIQLAEDLG-YEVEERRVSIEEL 285
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic
OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1
Length = 415
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 5 TPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQ 45
TP + G ILPGITR SI+E++ +KV ER +T+ ++V+
Sbjct: 313 TPEIKGTILPGITRKSIIEVARS-QGFKVEERNVTVDELVE 352
>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4
PE=1 SV=1
Length = 354
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 5 TPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIV 44
TPT+ G ILPG+TR ++EL + Y+V ER I + D +
Sbjct: 250 TPTIAGTILPGVTRNCVMELCRDFG-YQVEERTIPLVDFL 288
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis
thaliana GN=BCAT6 PE=1 SV=1
Length = 356
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 5 TPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQ 45
TP G ILPG+TR SI EL+H Y+V ER +++ ++++
Sbjct: 251 TPPTSGTILPGVTRKSISELAHDIG-YQVEERDVSVDELLE 290
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7
OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1
Length = 367
Score = 36.6 bits (83), Expect = 0.042, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 5 TPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQ 45
TP G ILPGITR SI EL+ Y+V ER +++ ++++
Sbjct: 254 TPPTSGTILPGITRKSICELARDIG-YEVQERDLSVDELLE 293
>sp|P47176|BCA2_YEAST Branched-chain-amino-acid aminotransferase, cytosolic
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=BAT2 PE=1 SV=1
Length = 376
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQW---NDYKVTERKITMPDIVQLSR 48
E++T LDG IL G+TR SIL L+ + +++ ++ER T+ ++ + S+
Sbjct: 256 ELVTAPLDGTILEGVTRDSILNLAKERLEPSEWTISERYFTIGEVTERSK 305
>sp|A0R066|ILVE_MYCS2 Branched-chain-amino-acid aminotransferase OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=ilvE PE=1
SV=1
Length = 368
Score = 36.6 bits (83), Expect = 0.051, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 3 MITPTLDGLILPGITRMSILELSHQWNDYKVTERKI 38
++TP L G +LPGITR S+L+L+ + V ERKI
Sbjct: 258 LVTPELSGSLLPGITRDSLLQLATD-AGFAVEERKI 292
>sp|O32954|ILVE_MYCLE Probable branched-chain-amino-acid aminotransferase
OS=Mycobacterium leprae (strain TN) GN=ilvE PE=3 SV=1
Length = 368
Score = 36.2 bits (82), Expect = 0.055, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 3 MITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPD 42
++TP L G +LPG+TR S+L+L+ + V ERKI + +
Sbjct: 258 LVTPELSGSLLPGVTRASLLQLAID-AGFSVEERKIDIDE 296
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic
OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1
Length = 413
Score = 36.2 bits (82), Expect = 0.061, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 5 TPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQ 45
TP + G ILPGITR S+++++ ++V ER +T+ ++++
Sbjct: 311 TPEIKGTILPGITRKSMIDVART-QGFQVEERNVTVDELLE 350
>sp|O31461|ILVE1_BACSU Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis
(strain 168) GN=ilvE PE=1 SV=1
Length = 356
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIVQLS 47
E +TP L G IL G+TR S +EL W V E +I++ ++ S
Sbjct: 246 EAVTPALSGSILSGVTRASAIELIRSWG-IPVREERISIDEVYAAS 290
>sp|Q10399|ILVE_MYCTU Branched-chain-amino-acid aminotransferase OS=Mycobacterium
tuberculosis GN=ilvE PE=1 SV=1
Length = 368
Score = 35.0 bits (79), Expect = 0.16, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 3 MITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPD 42
++TP L G +LPGITR S+L+L+ + V ER+I + +
Sbjct: 258 LVTPELSGSLLPGITRDSLLQLAID-AGFAVEERRIDIDE 296
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial
OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2
Length = 384
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 3 MITPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDI 43
++TP G IL GITR SI+E++ YKV ER + + ++
Sbjct: 281 IVTPATSGTILGGITRKSIIEIALDLG-YKVEERSVPVEEL 320
>sp|P38891|BCA1_YEAST Branched-chain-amino-acid aminotransferase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=BAT1 PE=1 SV=1
Length = 393
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 2 EMITPTLDGLILPGITRMSILELSHQWND---YKVTERKITMPDIVQLSRE 49
E++T LDG IL G+TR S+L L+ D + + ER T+ ++ +++
Sbjct: 273 ELVTAPLDGTILEGVTRDSVLTLARDKLDPQEWDINERYYTITEVATRAKQ 323
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic
OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1
Length = 388
Score = 32.3 bits (72), Expect = 0.97, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 5 TPTLDGLILPGITRMSILELSHQWNDYKVTERKITMPDIV 44
TP +G IL GITR S++E++ Y+V E+ + + +++
Sbjct: 287 TPATNGTILEGITRKSVMEIASD-QGYQVVEKAVHVDEVM 325
>sp|O26004|ILVE_HELPY Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=ilvE PE=3 SV=1
Length = 340
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 12 ILPGITRMSILELSHQWNDYKVTERKITMPDI 43
ILP IT+ S++ L+ ++ + KV ER+I M ++
Sbjct: 246 ILPSITKKSLMVLAKEYLNLKVEEREILMDEL 277
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,940,016
Number of Sequences: 539616
Number of extensions: 403221
Number of successful extensions: 1034
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 997
Number of HSP's gapped (non-prelim): 38
length of query: 51
length of database: 191,569,459
effective HSP length: 24
effective length of query: 27
effective length of database: 178,618,675
effective search space: 4822704225
effective search space used: 4822704225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)