Query psy10043
Match_columns 504
No_of_seqs 445 out of 2685
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 16:24:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10043.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10043hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k35_A NAD-dependent deacetyla 100.0 6E-61 2E-65 487.7 18.6 254 87-392 18-278 (318)
2 3pki_A NAD-dependent deacetyla 100.0 1.3E-60 4.4E-65 489.4 17.1 254 87-392 18-278 (355)
3 4iao_A NAD-dependent histone d 100.0 1.8E-58 6E-63 488.9 18.0 282 4-389 143-460 (492)
4 2hjh_A NAD-dependent histone d 100.0 4.1E-59 1.4E-63 483.4 6.6 302 4-417 5-348 (354)
5 3glr_A NAD-dependent deacetyla 100.0 2.3E-57 8E-62 456.5 18.4 246 40-386 11-266 (285)
6 1yc5_A NAD-dependent deacetyla 100.0 2E-57 6.9E-62 449.2 14.5 243 40-386 3-246 (246)
7 1ma3_A SIR2-AF2, transcription 100.0 1.1E-56 3.9E-61 445.6 16.4 244 36-383 1-246 (253)
8 1m2k_A Silent information regu 100.0 8.7E-56 3E-60 438.3 16.1 238 41-384 3-241 (249)
9 3u31_A SIR2A, transcriptional 100.0 3.2E-56 1.1E-60 449.6 12.9 255 28-383 23-279 (290)
10 3riy_A NAD-dependent deacetyla 100.0 1.1E-55 3.6E-60 443.1 15.2 245 39-380 10-272 (273)
11 1j8f_A SIRT2, sirtuin 2, isofo 100.0 2.8E-55 9.5E-60 449.4 17.4 264 39-386 30-305 (323)
12 1q1a_A HST2 protein; ternary c 100.0 4E-55 1.4E-59 442.2 16.9 251 36-386 4-280 (289)
13 1q14_A HST2 protein; histone d 100.0 4E-54 1.4E-58 446.1 16.2 257 27-386 3-288 (361)
14 1s5p_A NAD-dependent deacetyla 100.0 3.6E-54 1.2E-58 423.3 11.9 228 50-383 1-230 (235)
15 3k35_A NAD-dependent deacetyla 99.6 2E-15 6.9E-20 153.5 9.0 116 13-131 6-125 (318)
16 3pki_A NAD-dependent deacetyla 99.6 3.6E-15 1.2E-19 153.1 9.0 68 13-80 6-74 (355)
17 1yc5_A NAD-dependent deacetyla 99.1 1.2E-11 4.1E-16 121.8 1.5 65 103-169 3-67 (246)
18 3riy_A NAD-dependent deacetyla 99.1 2.3E-11 7.8E-16 121.6 3.1 43 103-145 11-53 (273)
19 1ma3_A SIR2-AF2, transcription 99.1 3.1E-11 1.1E-15 119.3 3.1 67 101-168 3-69 (253)
20 1q1a_A HST2 protein; ternary c 99.1 6.8E-11 2.3E-15 119.0 4.3 45 101-145 6-53 (289)
21 2hjh_A NAD-dependent histone d 99.0 4.9E-11 1.7E-15 123.4 3.2 43 103-145 36-78 (354)
22 3glr_A NAD-dependent deacetyla 99.0 5E-11 1.7E-15 119.8 2.3 44 103-146 11-57 (285)
23 3u31_A SIR2A, transcriptional 99.0 2.6E-11 8.9E-16 122.2 0.2 68 101-169 33-101 (290)
24 1m2k_A Silent information regu 99.0 7.3E-11 2.5E-15 116.4 2.9 41 104-144 3-43 (249)
25 1q14_A HST2 protein; histone d 99.0 8.9E-11 3E-15 121.6 3.2 53 93-145 6-61 (361)
26 4iao_A NAD-dependent histone d 99.0 1.4E-10 4.6E-15 123.4 2.9 43 103-145 174-216 (492)
27 1j8f_A SIRT2, sirtuin 2, isofo 99.0 2.4E-10 8.2E-15 116.8 3.9 43 103-145 31-76 (323)
28 1s5p_A NAD-dependent deacetyla 98.8 6E-10 2.1E-14 108.9 1.3 32 113-144 1-32 (235)
29 3eya_A Pyruvate dehydrogenase 74.5 5.7 0.00019 42.4 7.5 67 266-384 258-324 (549)
30 4feg_A Pyruvate oxidase; carba 73.7 7.9 0.00027 41.9 8.5 71 266-385 269-339 (603)
31 2iht_A Carboxyethylarginine sy 68.2 13 0.00045 39.8 8.7 70 267-384 281-351 (573)
32 2pgn_A Cyclohexane-1,2-dione h 67.3 13 0.00043 40.2 8.3 21 364-384 314-334 (589)
33 1ozh_A ALS, acetolactate synth 67.0 13 0.00046 39.7 8.4 21 364-384 316-336 (566)
34 2c31_A Oxalyl-COA decarboxylas 66.7 13 0.00045 39.7 8.2 21 364-384 318-338 (568)
35 1ybh_A Acetolactate synthase, 65.8 12 0.0004 40.4 7.7 72 266-384 271-342 (590)
36 1v5e_A Pyruvate oxidase; oxido 65.8 13 0.00046 40.0 8.2 70 266-384 262-331 (590)
37 2q28_A Oxalyl-COA decarboxylas 62.9 17 0.0006 38.7 8.3 21 364-384 314-334 (564)
38 1q6z_A BFD, BFDC, benzoylforma 62.4 11 0.00037 40.0 6.5 21 364-384 310-330 (528)
39 3lq1_A 2-succinyl-5-enolpyruvy 61.8 12 0.00043 40.1 6.9 21 364-384 333-353 (578)
40 2uz1_A Benzaldehyde lyase; thi 60.6 14 0.00049 39.4 7.1 21 364-384 314-334 (563)
41 1t9b_A Acetolactate synthase, 56.5 13 0.00046 40.9 6.2 21 364-384 409-429 (677)
42 3hww_A 2-succinyl-5-enolpyruvy 47.9 22 0.00076 37.9 6.0 20 266-285 271-290 (556)
43 2x7j_A 2-succinyl-5-enolpyruvy 47.4 27 0.00092 37.6 6.6 21 364-384 353-373 (604)
44 2pan_A Glyoxylate carboligase; 45.0 20 0.00069 38.7 5.2 21 364-384 337-357 (616)
45 3fxa_A SIS domain protein; str 38.0 16 0.00054 33.2 2.5 57 3-64 2-58 (201)
46 2vpz_A Thiosulfate reductase; 36.1 13 0.00044 41.4 1.9 55 271-325 197-251 (765)
47 1o97_D Electron transferring f 30.1 60 0.002 32.4 5.5 22 362-383 297-318 (320)
48 2lcq_A Putative toxin VAPC6; P 30.0 18 0.00063 32.2 1.5 28 205-246 131-159 (165)
49 1h0h_A Formate dehydrogenase ( 26.7 21 0.0007 41.1 1.5 54 270-324 181-234 (977)
50 4g9i_A Hydrogenase maturation 26.5 82 0.0028 35.4 6.3 45 233-281 175-220 (772)
51 2e7z_A Acetylene hydratase AHY 25.9 11 0.00037 41.7 -1.0 54 271-324 158-211 (727)
52 3cf4_G Acetyl-COA decarboxylas 24.8 49 0.0017 29.5 3.4 23 40-62 24-46 (170)
53 2ivf_A Ethylbenzene dehydrogen 22.5 23 0.00079 40.7 0.8 55 270-325 243-297 (976)
54 2xhz_A KDSD, YRBH, arabinose 5 21.5 69 0.0024 28.1 3.7 53 7-65 11-63 (183)
55 3ml1_A NAPA, periplasmic nitra 21.5 20 0.00067 40.4 -0.0 53 270-324 175-230 (802)
56 3vth_A Hydrogenase maturation 21.5 1.1E+02 0.0039 34.2 6.2 44 233-283 180-224 (761)
57 1kqf_A FDH-N alpha, formate de 21.3 18 0.00061 41.8 -0.4 54 270-324 219-273 (1015)
58 2iv2_X Formate dehydrogenase H 21.2 15 0.00052 40.4 -1.0 54 270-325 163-217 (715)
59 1e2b_A Enzyme IIB-cellobiose; 21.0 28 0.00097 28.9 0.9 14 114-127 4-17 (106)
No 1
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=100.00 E-value=6e-61 Score=487.68 Aligned_cols=254 Identities=41% Similarity=0.562 Sum_probs=205.0
Q ss_pred ccccccCCChHHHHHHHHHHHHHHHhccceeeecCCCcccCCCCCCcCCCCccccccccCccc-cccccccCCCCHHHHH
Q psy10043 87 SRNEELEDKPEILAAKCKQLAEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQGKDI-GNHDLSLAEPTLTHMA 165 (504)
Q Consensus 87 S~l~efeDdPe~l~eki~~LaelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~-~~~~~~~a~Pn~~H~~ 165 (504)
..+.+++|+|+.+...+..++++++++++|||+|||||||+|||||||+++|+|+.......+ +...+..++||.+|++
T Consensus 18 ~~~~e~~d~p~~l~~~i~~l~~~i~~a~~ivvlTGAGISteSGIPdFR~~~Glw~~~~~~~~p~~~~~f~~a~Pn~~H~a 97 (318)
T 3k35_A 18 CGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDFRGPHGVWTMEERGLAPKFDTTFESARPTQTHMA 97 (318)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHHHHCSCEEEEECGGGSGGGTCCCSSSTTCHHHHHTTTCCCCCSSCTTTCCCCHHHHH
T ss_pred cCCccccCCHHHHHHHHHHHHHHHHhCCCEEEEeccccChhhCCCccccCCCcchhhhccCCHHHHHHhhhCCCCHHHHH
Confidence 446889999999999999999999999999999999999999999999999999975443322 2345678999999999
Q ss_pred HHHHHhcCCceeEEeecchhhhhhcCCCCCCccccCCccceeeccCCCCCcccccccchhhh----hh-hhhccCCCCC-
Q psy10043 166 LYKLYRHGFVKHVVSQNCDDLHLRSGLPRSVLSEVHGNMSVEVCAHCDPVKYYWRVFDVTEH----TA-RYAHQTARKC- 239 (504)
Q Consensus 166 La~L~~~G~l~~viTQNIDgLh~rAG~~~~~viElHG~l~~~~C~~C~~~~~~~~~~~~~~~----~~-~~~~~~~P~C- 239 (504)
|++|+++|++.+||||||||||++||++.++|+|+|||++..+|+.|+.. |.+....... +. .......+.|
T Consensus 98 La~Le~~g~~~~viTQNIDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~--~~~~~~~~~~~~~p~~~~C~~~~~~~c~ 175 (318)
T 3k35_A 98 LVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQ--YVRDTVVGTMGLKATGRLCTVAKARGLR 175 (318)
T ss_dssp HHHHHHTTCCCEEEECCCSCHHHHBTCCGGGEEETTCCTTEEEETTTCCE--EECSSCCSCCSSCEEEEECCC-------
T ss_pred HHHHHHcCCceEEEEecccchHhhcCCCccCEEEeCCCCCeeEeCCCCCc--cchHHhhhhcccCCCCCcCccccccccc
Confidence 99999999999999999999999999987899999999999999999964 3221111000 00 0000012345
Q ss_pred CCCCCccccEEEecCCCCCCChhhHHHHHHHHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcc
Q psy10043 240 SCGEPLLDTIIHFGEKGVLLWPLNWDGANKNADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQ 319 (504)
Q Consensus 240 ~Cgg~LrP~IV~FGE~~~~~~~~~~~~a~~~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~ 319 (504)
.|||.|||+||||||++ +...++.|.+++++||++|||||||+|+|+ +.++..+..
T Consensus 176 ~CgG~LRPdVV~FGE~l---P~~~~~~a~~~~~~aDllLViGTSL~V~Pa---a~l~~~a~~------------------ 231 (318)
T 3k35_A 176 ACRGELRDTILDWEDSL---PDRDLALADEASRNADLSITLGTSLQIRPS---GNLPLATKR------------------ 231 (318)
T ss_dssp -CCCEEEECCCCTTCCC---CHHHHHHHHHHHHTCSEEEEESCCCCSTTG---GGHHHHHHH------------------
T ss_pred CcCCeeCCCEEEccCcC---CHHHHHHHHHHHhcCCEEEEEccCCCchhh---hhhHHHHHh------------------
Confidence 69999999999999995 345688999999999999999999999754 333222222
Q ss_pred cceeecCCCcchhccccccCCCCCCCCCCceEEeccccCCCCCcccEEEecCHHHHHHHHHHHcCCCCCCCcC
Q psy10043 320 ATLKINGKYPVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKCDVVFKQLMAHLNLDIPAYDK 392 (504)
Q Consensus 320 a~~~i~~~~p~~~~~~~~~~~~~~~~~~~~l~ivN~q~t~~d~~adl~i~g~cD~v~~~L~~~Lg~~ip~~~~ 392 (504)
.+++++|||+++|+.|+.+|++|+|+||++|++||++|||+||.|+.
T Consensus 232 --------------------------~G~~vviIN~~~t~~d~~adl~i~g~~~evl~~L~~~Lg~~iP~~~~ 278 (318)
T 3k35_A 232 --------------------------RGGRLVIVNLQPTKHDRHADLRIHGYVDEVMTRLMKHLGLEIPAWDG 278 (318)
T ss_dssp --------------------------TTCEEEEECSSCCTTGGGCSEEECSCHHHHHHHHHHHHTCCCCCCCS
T ss_pred --------------------------cCCEEEEECCCCCCCCCcccEEEeCCHHHHHHHHHHHhCCCCCCCCC
Confidence 34456778888888889999999999999999999999999999985
No 2
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=100.00 E-value=1.3e-60 Score=489.36 Aligned_cols=254 Identities=41% Similarity=0.568 Sum_probs=207.6
Q ss_pred ccccccCCChHHHHHHHHHHHHHHHhccceeeecCCCcccCCCCCCcCCCCccccccccCccc-cccccccCCCCHHHHH
Q psy10043 87 SRNEELEDKPEILAAKCKQLAEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQGKDI-GNHDLSLAEPTLTHMA 165 (504)
Q Consensus 87 S~l~efeDdPe~l~eki~~LaelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~-~~~~~~~a~Pn~~H~~ 165 (504)
..+.+++|+|+.+...+..++++++++++|||+|||||||+|||||||+++|+|+....+... +...+..++||.+|++
T Consensus 18 ~g~~E~~D~p~~l~~~i~~la~~i~~a~~iVvlTGAGISteSGIPDFR~~~Glw~~~~~~~~p~~~~~f~~a~Pn~~H~a 97 (355)
T 3pki_A 18 CGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDFRGPHGVWTMEERGLAPKFDTTFESARPTQTHMA 97 (355)
T ss_dssp CSCCCCCCCHHHHHHHHHHHHHHHHHCSSEEEEECGGGSGGGTCCCSSSTTCHHHHHHTTCCCCCSSCTTTCCCCHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEeccccchhhCCCccccCCCccchhhccCChHHHHHHhhCCCCHHHHH
Confidence 446889999999999999999999999999999999999999999999999999976543322 2345678999999999
Q ss_pred HHHHHhcCCceeEEeecchhhhhhcCCCCCCccccCCccceeeccCCCCCcccccccchhhh----hhhhh-ccCCCCC-
Q psy10043 166 LYKLYRHGFVKHVVSQNCDDLHLRSGLPRSVLSEVHGNMSVEVCAHCDPVKYYWRVFDVTEH----TARYA-HQTARKC- 239 (504)
Q Consensus 166 La~L~~~G~l~~viTQNIDgLh~rAG~~~~~viElHG~l~~~~C~~C~~~~~~~~~~~~~~~----~~~~~-~~~~P~C- 239 (504)
|++|+++|++.+||||||||||++||++.++|+|||||++..+|+.|+.. |.+....... +.... ....+.|
T Consensus 98 La~Le~~g~l~~viTQNIDgLh~rAG~~~~~VieLHGsl~~~~C~~C~~~--~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 175 (355)
T 3pki_A 98 LVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQ--YVRDTVVGTMGLKATGRLCTVAKARGLR 175 (355)
T ss_dssp HHHHHHTTCCSEEEECCCSCHHHHEEEEGGGEEETTCCTTEEEETTTCCE--EEBSSCCSCCSSCEEEEECCCCCBTTBC
T ss_pred HHHHHHcCCCcEEEEecccchHhhcCCCcccEEEeCCCCCceeeCCCCCc--cchHHhhhhcccCCCCCccccccccccc
Confidence 99999999999999999999999999987899999999999999999964 3221111000 00000 0112345
Q ss_pred CCCCCccccEEEecCCCCCCChhhHHHHHHHHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcc
Q psy10043 240 SCGEPLLDTIIHFGEKGVLLWPLNWDGANKNADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQ 319 (504)
Q Consensus 240 ~Cgg~LrP~IV~FGE~~~~~~~~~~~~a~~~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~ 319 (504)
.|||.|||+||||||++ +...++.|.+++++|||+|||||||+|+| ++.++..+...
T Consensus 176 ~CgG~LRPdVV~FGE~l---P~~~~~~A~~~~~~aDllLViGTSL~V~P---aa~Lp~~a~~~----------------- 232 (355)
T 3pki_A 176 ACRGELRDTILDWEDSL---PDRDLALADEASRNADLSITLGTSLQIRP---SGNLPLATKRR----------------- 232 (355)
T ss_dssp CCCCEEEECCCCTTSCC---CHHHHHHHHHHHHHCSEEEEESCCCCSTT---GGGTTHHHHHT-----------------
T ss_pred cCCCccCCCEEECCCcC---CHHHHHHHHHHHhcCCEEEEEeeCCCchh---hhhhHHHHHhc-----------------
Confidence 79999999999999995 34568899999999999999999999974 44333222222
Q ss_pred cceeecCCCcchhccccccCCCCCCCCCCceEEeccccCCCCCcccEEEecCHHHHHHHHHHHcCCCCCCCcC
Q psy10043 320 ATLKINGKYPVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKCDVVFKQLMAHLNLDIPAYDK 392 (504)
Q Consensus 320 a~~~i~~~~p~~~~~~~~~~~~~~~~~~~~l~ivN~q~t~~d~~adl~i~g~cD~v~~~L~~~Lg~~ip~~~~ 392 (504)
+++++|||+++|+.|..+|++|+|+||++|++||++|||+||.|+.
T Consensus 233 ---------------------------G~~vviIN~~pT~~d~~adl~i~g~a~evl~~L~~~Lg~~iP~~~~ 278 (355)
T 3pki_A 233 ---------------------------GGRLVIVNLQPTKHDRHADLRIHGYVDEVMTRLMEHLGLEIPAWDG 278 (355)
T ss_dssp ---------------------------TCEEEEECSSCCTTGGGCSEEECSCHHHHHHHHHHHTTCCCCCCCS
T ss_pred ---------------------------CCEEEEECCCCCCCCCccCEEEeCCHHHHHHHHHHHhCCCCCCCCC
Confidence 4456778888888888999999999999999999999999999994
No 3
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-58 Score=488.86 Aligned_cols=282 Identities=21% Similarity=0.263 Sum_probs=208.4
Q ss_pred CchhHHHHHHHHHhhhhccccccccccCChHHHHHHHHHHHHHHHhCCcEEEEccCCcccccccCCcccccchhhhh---
Q psy10043 4 DSNDSIGVLKERLKKINKVKSRNEELEDEPEVLAAKCKKLAEAIQNAKHVVVYTGAGISTAAKIPDYRSNFTIYRLK--- 80 (504)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~l~~~l~~~~~ivv~TGAGiS~~SGiPdfR~~~g~Wr~~--- 80 (504)
|+.+++++++....++++..+.+...... ..+++++++|++|++|||+|||||||+||||||||++|+|++.
T Consensus 143 ~~~~~~~~~~~l~~~~~r~~~~r~kl~~~-----~~i~~l~~~L~~ak~IVVLTGAGISTeSGIPDFRs~~GLw~~~~~~ 217 (492)
T 4iao_A 143 AKKQTVRLIKDLQRAINKVLCTRLRLSNF-----FTIDHFIQKLHTARKILVLTGAGVSTSLGIPDFRSSEGFYSKIKHL 217 (492)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCCCTTC-----CSHHHHHHHHHHCSCEEEEECGGGGGGGTCCCSSSTTSHHHHHHTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhH-----HHHHHHHHHHHhCCcEEEEeCcccccccCCccccCchHHHHhhhhc
Confidence 45566666666666666655543333221 2377899999999999999999999999999999999999876
Q ss_pred ---hcccccccccccCCChHHHHHHHHHHHHHHHhccceeeecCCCcccCCCCCCcCCCCccccccccCccccccccccC
Q psy10043 81 ---KINKVKSRNEELEDKPEILAAKCKQLAEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLA 157 (504)
Q Consensus 81 ---kpe~laS~l~efeDdPe~l~eki~~LaelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a 157 (504)
+++.+++. +.|..+|+.+|.++. . + ....+
T Consensus 218 gl~~Pe~v~s~-~~F~~dP~~Fy~~~r----------~--~----------------------------------~~~~~ 250 (492)
T 4iao_A 218 GLDDPQDVFNY-NIFMHDPSVFYNIAN----------M--V----------------------------------LPPEK 250 (492)
T ss_dssp CCSCGGGGGBH-HHHHHCHHHHHHHGG----------G--G----------------------------------CCCSS
T ss_pred CCCCHHHhcCH-HHHhhChHHHHHHHH----------H--h----------------------------------hCCcC
Confidence 46777774 777788877653210 0 0 00235
Q ss_pred CCCHHHHHHHHHHhcCCceeEEeecchhhhhhcCCCCCCccccCCccceeeccCCCCCcccccccchhhh---------h
Q psy10043 158 EPTLTHMALYKLYRHGFVKHVVSQNCDDLHLRSGLPRSVLSEVHGNMSVEVCAHCDPVKYYWRVFDVTEH---------T 228 (504)
Q Consensus 158 ~Pn~~H~~La~L~~~G~l~~viTQNIDgLh~rAG~~~~~viElHG~l~~~~C~~C~~~~~~~~~~~~~~~---------~ 228 (504)
+||++|++|++|+++|++.+||||||||||++||++.++|+|+|||++..+|+.|+...+....+..... .
T Consensus 251 ~Pn~aH~aLa~Le~~G~l~~VITQNIDgLHqrAG~~s~~ViELHGsl~~~~C~~Cg~~~~~e~i~~~i~~~~~P~Cp~Cg 330 (492)
T 4iao_A 251 IYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNLELPLCPYCY 330 (492)
T ss_dssp CCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCTTTEEETTCCTTEEEETTTCCEEEGGGGHHHHHTTCCCBCTTTH
T ss_pred CCCHHHHHHHHHHHCCCCceeEeccccchHhhcCCChhhEEeecCccceeecCCCCCcCCHHHHHHHHhccCCCCCcccc
Confidence 7999999999999999999999999999999999988899999999999999999965332111110000 0
Q ss_pred --------------------hhhhccCCCCC-CCCCCccccEEEecCCCCCCChhhHHHHHHHHhcCCeeEEEccccccc
Q psy10043 229 --------------------ARYAHQTARKC-SCGEPLLDTIIHFGEKGVLLWPLNWDGANKNADRADLILCVGSSLKVL 287 (504)
Q Consensus 229 --------------------~~~~~~~~P~C-~Cgg~LrP~IV~FGE~~~~~~~~~~~~a~~~~~~aDllLVvGTSL~V~ 287 (504)
....+...+.| .|+|.|||+||||||++ +...++.|.+++++|||+|||||||+|+
T Consensus 331 ~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~c~~cgG~LRPdIVfFGE~L---P~~~~~~a~~~~~~aDLlLVIGTSL~Vy 407 (492)
T 4iao_A 331 KKRREYFPEGYNNKVGVAASQGSMSERPPYILNSYGVLKPDITFFGEAL---PNKFHKSIREDILECDLLICIGTSLKVA 407 (492)
T ss_dssp HHHHHHSTTCCCCC--------CCTTCCTTCCTTTTBEEESSCCBTSBC---CHHHHHHHHHHTTTCSEEEEESCCCCEE
T ss_pred cccccccccccccccccccccccccccccccccCCCcCCCCEEECCCCC---CHHHHHHHHHHHhhCCEEEEeccCCCcc
Confidence 00001124566 77899999999999995 3446778889999999999999999997
Q ss_pred ccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCCCCCceEEeccccCCCCCcccEE
Q psy10043 288 RKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLK 367 (504)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~~~~~l~ivN~q~t~~d~~adl~ 367 (504)
|++.+ +..+. .+.++ ++||.++|+. ..+|+.
T Consensus 408 PaA~L---v~~a~-~~~p~--------------------------------------------ViIN~ept~~-~~~Dl~ 438 (492)
T 4iao_A 408 PVSEI---VNMVP-SHVPQ--------------------------------------------VLINRDPVKH-AEFDLS 438 (492)
T ss_dssp TGGGH---HHHSB-TTSCE--------------------------------------------EEEESSCCTT-SCCSEE
T ss_pred chhhH---HHHHh-cCCcE--------------------------------------------EEEcCCCCCC-CCccEE
Confidence 55443 32222 22234 4555555553 347899
Q ss_pred EecCHHHHHHHHHHHcCCCCCC
Q psy10043 368 INGKCDVVFKQLMAHLNLDIPA 389 (504)
Q Consensus 368 i~g~cD~v~~~L~~~Lg~~ip~ 389 (504)
|.|+||++|++||++|||++|.
T Consensus 439 l~G~cdevv~~L~~~LGw~ip~ 460 (492)
T 4iao_A 439 LLGYCDDIAAMVAQKCGWTIPH 460 (492)
T ss_dssp EESCHHHHHHHHHHHTTCCCCS
T ss_pred EeCCHHHHHHHHHHHhCCCCCh
Confidence 9999999999999999999985
No 4
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-59 Score=483.41 Aligned_cols=302 Identities=19% Similarity=0.229 Sum_probs=219.4
Q ss_pred CchhHHHHHHHHHhhhhccccccccccCChHHHHHHHHHHHHHHHhCCcEEEEccCCcccccccCCcccccchhhhh---
Q psy10043 4 DSNDSIGVLKERLKKINKVKSRNEELEDEPEVLAAKCKKLAEAIQNAKHVVVYTGAGISTAAKIPDYRSNFTIYRLK--- 80 (504)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~l~~~l~~~~~ivv~TGAGiS~~SGiPdfR~~~g~Wr~~--- 80 (504)
++.+.+++|+....++++..+.+....+. ..++.++++|++|++|||+|||||||+||||||||++|+|++.
T Consensus 5 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~-----~~i~~l~~~l~~a~~IvvlTGAGISt~SGIPdFR~~~Glw~~~~~~ 79 (354)
T 2hjh_A 5 AKKQTVRLIKDLQRAINKVLCTRLRLSNF-----FTIDHFIQKLHTARKILVLTGAGVSTSLGIPDFRSSEGFYSKIKHL 79 (354)
T ss_dssp EEEEECCCBCEEC-----CCCCCCCCTTC-----CSHHHHHHHHHHCSSEEEEECGGGGGGGTCCCSSSTTSHHHHTGGG
T ss_pred hhhhHHHHHHHHHHHHHHhhccccccCcH-----HHHHHHHHHHHhCCcEEEEECchhhHhhCCCcccCcchHHHHHHhh
Confidence 44555555666666666666655554432 2477899999999999999999999999999999999999974
Q ss_pred ---hcccccccccccCCChHHHHHHHHHHHHHHHhccceeeecCCCcccCCCCCCcCCCCccccccccCccccccccccC
Q psy10043 81 ---KINKVKSRNEELEDKPEILAAKCKQLAEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLA 157 (504)
Q Consensus 81 ---kpe~laS~l~efeDdPe~l~eki~~LaelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a 157 (504)
+++.+.+. ..|..+|+.+|.++. . +| ...+
T Consensus 80 ~l~~p~~~~~~-~~F~~~P~~f~~~~~----------~-----------------------~~-------------~~~~ 112 (354)
T 2hjh_A 80 GLDDPQDVFNY-NIFMHDPSVFYNIAN----------M-----------------------VL-------------PPEK 112 (354)
T ss_dssp CCSSGGGGGBH-HHHHHCTHHHHHHGG----------G-----------------------GC-------------CCCS
T ss_pred cCCCHHHhCCH-HHHhcCHHHHHHHHH----------H-----------------------Hc-------------cccC
Confidence 34555554 556667766553210 0 00 0235
Q ss_pred CCCHHHHHHHHHHhcCCceeEEeecchhhhhhcCCCCCCccccCCccceeeccCCCCCcccccccchhhhhhhhhccCCC
Q psy10043 158 EPTLTHMALYKLYRHGFVKHVVSQNCDDLHLRSGLPRSVLSEVHGNMSVEVCAHCDPVKYYWRVFDVTEHTARYAHQTAR 237 (504)
Q Consensus 158 ~Pn~~H~~La~L~~~G~l~~viTQNIDgLh~rAG~~~~~viElHG~l~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~P 237 (504)
+||++|++|++|+++|++.+||||||||||++||++.++|+|+|||++..+|+.|+..++....+.. .....+|
T Consensus 113 ~Pn~~H~aLa~Le~~g~l~~viTQNVDgLh~rAG~~~~~vielHGsl~~~~C~~C~~~~~~~~~~~~------~~~~~~P 186 (354)
T 2hjh_A 113 IYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNK------IRNLELP 186 (354)
T ss_dssp CCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCTTTEEETTEEEEEEEETTTCCEEEGGGGHHH------HHTTCCC
T ss_pred CCCHHHHHHHHHHHcCCceEEEecccCcHHHHcCCCccCEEEecCCcCccccCCCCCcCCHHHHHHH------hhccCCC
Confidence 7999999999999999999999999999999999988899999999999999999964322111110 0111234
Q ss_pred C-----------------------------------C-CCCCCccccEEEecCCCCCCChhhHHHHHHHHhcCCeeEEEc
Q psy10043 238 K-----------------------------------C-SCGEPLLDTIIHFGEKGVLLWPLNWDGANKNADRADLILCVG 281 (504)
Q Consensus 238 ~-----------------------------------C-~Cgg~LrP~IV~FGE~~~~~~~~~~~~a~~~~~~aDllLVvG 281 (504)
. | .|+|.|||+||||||++ +...++.|.+++++||++||||
T Consensus 187 ~Cp~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~lrPdVV~FGE~l---p~~~~~~a~~~~~~aDllLviG 263 (354)
T 2hjh_A 187 LCPYCYKKRREYFPEGYNNKVGVAASQGSMSERPPYILNSYGVLKPDITFFGEAL---PNKFHKSIREDILECDLLICIG 263 (354)
T ss_dssp BCTTTHHHHHHHCCC-----------------CCTTSCTTTTBEEEEECCBTSBC---CHHHHHHHHHHTTTCCEEEEES
T ss_pred cCccccccccccccccccccccccccccccccccccccccCCeeCCChhhccccC---CHHHHHHHHHHHhhCCEEEEEC
Confidence 4 4 56799999999999995 3345788899999999999999
Q ss_pred ccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCCCCCceEEeccccCCCC
Q psy10043 282 SSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKD 361 (504)
Q Consensus 282 TSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~~~~~l~ivN~q~t~~d 361 (504)
|||+|+|++. ++..+. .+. ++++||+++|+.+
T Consensus 264 TSL~V~Paa~---lv~~~~-~~~--------------------------------------------~~v~IN~~~t~~~ 295 (354)
T 2hjh_A 264 TSLKVAPVSE---IVNMVP-SHV--------------------------------------------PQVLINRDPVKHA 295 (354)
T ss_dssp CCCCEETGGG---HHHHSC-TTS--------------------------------------------CEEEEESSCCTTS
T ss_pred cCCCchhHHH---HHHHHh-cCC--------------------------------------------cEEEEcCCCCCCC
Confidence 9999975443 322221 122 3355666666543
Q ss_pred CcccEEEecCHHHHHHHHHHHcCCCCCCCcCCCCccccccCCCCCcccccCCCCCC
Q psy10043 362 DQATLKINGKCDVVFKQLMAHLNLDIPAYDKRRDPVFYHSSHLIQPEYHTVRKPML 417 (504)
Q Consensus 362 ~~adl~i~g~cD~v~~~L~~~Lg~~ip~~~~~~d~~~~~~~~l~~~e~~~~~~~~~ 417 (504)
.+|++|+|+||++|++||++|||++|.+. ++| ++....++.+.|.+++++..-
T Consensus 296 -~~dl~i~g~~~~vl~~L~~~lgw~~p~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ 348 (354)
T 2hjh_A 296 -EFDLSLLGYCDDIAAMVAQKCGWTIPHKK-WND-LKNKNFKCQEKDKGVYVVTSD 348 (354)
T ss_dssp -CCSEEEESCHHHHHHHHHHHHTCCCCSTT-HHH-HHTCCEEEEEEETTEEEEEEC
T ss_pred -CcCEEEeCCHHHHHHHHHHHcCCCCchHH-HHH-hhccccccccccCCceeeccc
Confidence 48899999999999999999999999854 433 566666788888888865543
No 5
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=100.00 E-value=2.3e-57 Score=456.52 Aligned_cols=246 Identities=25% Similarity=0.288 Sum_probs=189.0
Q ss_pred HHHHHHHHHh--CCcEEEEccCCcccccccCCccccc-chhhhhhcc------cccccccccCCChHHHHHHHHHHHHHH
Q psy10043 40 CKKLAEAIQN--AKHVVVYTGAGISTAAKIPDYRSNF-TIYRLKKIN------KVKSRNEELEDKPEILAAKCKQLAEAI 110 (504)
Q Consensus 40 ~~~l~~~l~~--~~~ivv~TGAGiS~~SGiPdfR~~~-g~Wr~~kpe------~laS~l~efeDdPe~l~eki~~LaelI 110 (504)
+++++++|++ |++|||+|||||||+||||||||++ |+|++++.. .+.+. ..|..+|+.+|.++..+
T Consensus 11 l~~la~~i~~~~a~~IvvlTGAGISteSGIPdFR~~~~Glw~~~~~~~l~~pe~~~~~-~~f~~~P~~f~~~~~~~---- 85 (285)
T 3glr_A 11 LQDVAELIRARACQRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFEL-PFFFHNPKPFFTLAKEL---- 85 (285)
T ss_dssp HHHHHHHHHTTSCCCEEEEECGGGTGGGTCCCTTSSSSHHHHHHHTTCCSSGGGGGCH-HHHHHCCHHHHHHHHHH----
T ss_pred HHHHHHHHHhcCCCeEEEEeCCccchhhCCCCcccCCCccccchhccCCCCHHHHhCH-HHHhhCcHHHHHHHHHh----
Confidence 7799999997 8999999999999999999999985 999987543 33332 44666676665443221
Q ss_pred HhccceeeecCCCcccCCCCCCcCCCCccccccccCccccccccccCCCCHHHHHHHHHHhcCCceeEEeecchhhhhhc
Q psy10043 111 QNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYKLYRHGFVKHVVSQNCDDLHLRS 190 (504)
Q Consensus 111 ~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~L~~~G~l~~viTQNIDgLh~rA 190 (504)
+ ...++||.+|++|++|+++|++.+||||||||||++|
T Consensus 86 --------~----------------------------------~~~a~Pn~~H~~La~Le~~g~l~~viTQNIDgLh~rA 123 (285)
T 3glr_A 86 --------Y----------------------------------PGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVS 123 (285)
T ss_dssp --------S----------------------------------TTSCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHT
T ss_pred --------h----------------------------------hccCCCCHHHHHHHHHHHcCCCceEEeeeecchHhhc
Confidence 0 0246899999999999999999999999999999999
Q ss_pred CCCCCCccccCCccceeeccCCCCCcccccccchhhhhhhhhccCCCCC-CCCCCccccEEEecCCCCCCChhhHHHHHH
Q psy10043 191 GLPRSVLSEVHGNMSVEVCAHCDPVKYYWRVFDVTEHTARYAHQTARKC-SCGEPLLDTIIHFGEKGVLLWPLNWDGANK 269 (504)
Q Consensus 191 G~~~~~viElHG~l~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~P~C-~Cgg~LrP~IV~FGE~~~~~~~~~~~~a~~ 269 (504)
|++.++|+|+||+++..+|+.|+..++.. +.........+|+| .|||.|||+||||||++| ...+ .+.+
T Consensus 124 G~~~~~VielHGs~~~~~C~~C~~~~~~~------~~~~~i~~~~~P~C~~Cgg~lrP~IV~FGE~lp---~~~~-~~~~ 193 (285)
T 3glr_A 124 GIPASKLVEAHGTFASATCTVCQRPFPGE------DIRADVMADRVPRCPVCTGVVKPDIVFFGEPLP---QRFL-LHVV 193 (285)
T ss_dssp TCCGGGEEETTEEEEEEEETTTCCEEEGG------GGHHHHHTTCCCBCTTTCCBEEEEECCTTSBCC---GGGG-GHHH
T ss_pred CCCcccEEEecCCCCeEEECCCCCcCCHH------HHHHHhhcCCCCCCCCCCCccCCcEEEeCCcCC---HHHH-HHHH
Confidence 99888999999999999999999643211 11111224568999 999999999999999953 2233 5677
Q ss_pred HHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCCCCCc
Q psy10043 270 NADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKKERPK 349 (504)
Q Consensus 270 ~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~~~~~ 349 (504)
++.+|||+|||||||+|+| ++.++... ..+.++++||++++..-
T Consensus 194 ~~~~aDlllviGTSl~V~P---aa~l~~~~-~~~~~~v~IN~~~~~~~-------------------------------- 237 (285)
T 3glr_A 194 DFPMADLLLILGTSLEVEP---FASLTEAV-RSSVPRLLINRDLVGPL-------------------------------- 237 (285)
T ss_dssp HHHHCSEEEEESCCCCEET---TGGGGGSS-CTTSCEEEEESSCCTHH--------------------------------
T ss_pred HHhcCCEEEEeCCCCcccc---HHHHHHHH-hCCCcEEEECCCCcCcc--------------------------------
Confidence 8899999999999999964 55444333 23344556666654300
Q ss_pred eEEeccccCCCCCcccEEEecCHHHHHHHHHHHcCCC
Q psy10043 350 LCIVNLQWTPKDDQATLKINGKCDVVFKQLMAHLNLD 386 (504)
Q Consensus 350 l~ivN~q~t~~d~~adl~i~g~cD~v~~~L~~~Lg~~ 386 (504)
...+..+|+.+.|+||++|++|+++|||+
T Consensus 238 --------~~~~~~~d~~~~g~~~~~~~~L~~~lgw~ 266 (285)
T 3glr_A 238 --------AWHPRSRDVAQLGDVVHGVESLVELLGWT 266 (285)
T ss_dssp --------HHSCCTTEEEEESCHHHHHHHHHHHHTCH
T ss_pred --------ccCCCCccEEEcCCHHHHHHHHHHHhCCH
Confidence 00245688999999999999999999996
No 6
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=100.00 E-value=2e-57 Score=449.22 Aligned_cols=243 Identities=30% Similarity=0.393 Sum_probs=188.6
Q ss_pred HHHHHHHHHhCCcEEEEccCCcccccccCCcccccchhhhhhcccccccccccCCChHHHHHHHHHHHHHHHhccceeee
Q psy10043 40 CKKLAEAIQNAKHVVVYTGAGISTAAKIPDYRSNFTIYRLKKINKVKSRNEELEDKPEILAAKCKQLAEAIQNAKHVVVY 119 (504)
Q Consensus 40 ~~~l~~~l~~~~~ivv~TGAGiS~~SGiPdfR~~~g~Wr~~kpe~laS~l~efeDdPe~l~eki~~LaelI~~Ak~iVV~ 119 (504)
+++++++|++|++|||+|||||||+||||||||++|+|+++.+ .+.+. ..|..+|+.+|.++.+...
T Consensus 3 i~~l~~~l~~a~~ivv~tGAGiS~~SGIpdfR~~~Glw~~~~~-~~~~~-~~f~~~p~~~~~~~~~~~~----------- 69 (246)
T 1yc5_A 3 MKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQ-NVFDI-DFFYSHPEEFYRFAKEGIF----------- 69 (246)
T ss_dssp CHHHHHHHHHCSSEEEEECGGGTGGGTCCCC-----------C-CTTBH-HHHHHCHHHHHHHHHHHTG-----------
T ss_pred HHHHHHHHHhCCCEEEEECceeehhhCCCCccCCCcccccCCC-ceecH-HHHhhCHHHHHHHHHHHHH-----------
Confidence 5689999999999999999999999999999999999999988 88885 7888999998877655310
Q ss_pred cCCCcccCCCCCCcCCCCccccccccCccccccccccCCCCHHHHHHHHHHhcCCceeEEeecchhhhhhcCCCCCCccc
Q psy10043 120 TGAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYKLYRHGFVKHVVSQNCDDLHLRSGLPRSVLSE 199 (504)
Q Consensus 120 TGAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~L~~~G~l~~viTQNIDgLh~rAG~~~~~viE 199 (504)
.+..++||.+|++|++|+++|++.+||||||||||++||+ ++|+|
T Consensus 70 ---------------------------------~~~~~~Pn~~H~~La~L~~~g~~~~viTQNvD~Lh~~AG~--~~v~e 114 (246)
T 1yc5_A 70 ---------------------------------PMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGS--KKVIE 114 (246)
T ss_dssp ---------------------------------GGGGCCCCHHHHHHHHHHHTTSCSEEEECCCSCHHHHTTC--SCEEE
T ss_pred ---------------------------------HhccCCCCHHHHHHHHHHhcCCCceEEeccccchHhHcCC--CcEEE
Confidence 1246799999999999999999999999999999999998 47999
Q ss_pred cCCccceeeccCCCCCcccccccchhhhhhhhhccCCCCC-CCCCCccccEEEecCCCCCCChhhHHHHHHHHhcCCeeE
Q psy10043 200 VHGNMSVEVCAHCDPVKYYWRVFDVTEHTARYAHQTARKC-SCGEPLLDTIIHFGEKGVLLWPLNWDGANKNADRADLIL 278 (504)
Q Consensus 200 lHG~l~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~P~C-~Cgg~LrP~IV~FGE~~~~~~~~~~~~a~~~~~~aDllL 278 (504)
+|||++..+|+.|+.. |. ..+.........+|+| .|||.|||+||||||.+ +...|+.|.+++++||++|
T Consensus 115 lHG~~~~~~C~~C~~~--~~----~~~~~~~~~~~~~p~C~~Cgg~lrP~vv~FgE~l---p~~~~~~a~~~~~~adl~l 185 (246)
T 1yc5_A 115 LHGNVEEYYCVRCEKK--YT----VEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENL---PQDALREAIGLSSRASLMI 185 (246)
T ss_dssp TTEEEEEEEETTTCCE--EE----HHHHHHHTTTCSSCBCTTTCCBEEEEECCBTSBC---CHHHHHHHHHHHHHCSEEE
T ss_pred ecCccceeEcCCCCCC--Cc----HHHHHHHhccCCCCCCCCCCCccCcceEECCCCC---CHHHHHHHHHHHhcCCEEE
Confidence 9999999999999974 22 1111011122358999 99999999999999985 3457899999999999999
Q ss_pred EEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCCCCCceEEeccccC
Q psy10043 279 CVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKKERPKLCIVNLQWT 358 (504)
Q Consensus 279 VvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~~~~~l~ivN~q~t 358 (504)
||||||+|+|+ +.++..+...+ .++++||+++|
T Consensus 186 viGTSl~V~P~---~~l~~~a~~~g--------------------------------------------~~~i~IN~~~~ 218 (246)
T 1yc5_A 186 VLGSSLVVYPA---AELPLITVRSG--------------------------------------------GKLVIVNLGET 218 (246)
T ss_dssp EESCCSCEETG---GGHHHHHHHHT--------------------------------------------CEEEEECSSCC
T ss_pred EECCCCcchhH---HHHHHHHHHcC--------------------------------------------CeEEEEeCCCC
Confidence 99999999754 33322222223 34566677777
Q ss_pred CCCCcccEEEecCHHHHHHHHHHHcCCC
Q psy10043 359 PKDDQATLKINGKCDVVFKQLMAHLNLD 386 (504)
Q Consensus 359 ~~d~~adl~i~g~cD~v~~~L~~~Lg~~ 386 (504)
+.|..+++.|.|+|++++++|+++|||.
T Consensus 219 ~~d~~~~~~i~~~~~~~l~~l~~~lg~~ 246 (246)
T 1yc5_A 219 PFDDIATLKYNMDVVEFARRVMEEGGIS 246 (246)
T ss_dssp TTGGGCSEEECSCHHHHHHHHHHHHTC-
T ss_pred CCCcceeEEEeCCHHHHHHHHHHHcCCC
Confidence 7777789999999999999999999973
No 7
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=100.00 E-value=1.1e-56 Score=445.59 Aligned_cols=244 Identities=30% Similarity=0.420 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHhCCcEEEEccCCcccccccCCcccccchhhhhhcccccccccccCCChHHHHHHHHHHHHHHHhccc
Q psy10043 36 LAAKCKKLAEAIQNAKHVVVYTGAGISTAAKIPDYRSNFTIYRLKKINKVKSRNEELEDKPEILAAKCKQLAEAIQNAKH 115 (504)
Q Consensus 36 ~~~~~~~l~~~l~~~~~ivv~TGAGiS~~SGiPdfR~~~g~Wr~~kpe~laS~l~efeDdPe~l~eki~~LaelI~~Ak~ 115 (504)
|++++++++++|++|++|||+|||||||+||||||||++|+|++++++.+.+. ..|..+|+.+|.++......
T Consensus 1 m~~~i~~l~~~l~~a~~ivv~tGAGiS~~SGIPdfR~~~Glw~~~~~~~~~~~-~~f~~~p~~~~~f~~~~~~~------ 73 (253)
T 1ma3_A 1 MEDEIRKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASI-SGFKRNPRAFWEFSMEMKDK------ 73 (253)
T ss_dssp CHHHHHHHHHHHHHCSSEEEEECGGGSCC----------CCSCSSCHHHHTBH-HHHTTCHHHHHHHHHHTHHH------
T ss_pred ChHHHHHHHHHHHhCCcEEEEEchhhhHhhCCCCcCCCCcccccCChhheecH-HHHhcCHHHHHHHHHHHHHh------
Confidence 45678999999999999999999999999999999999999999999888886 78899999999877664221
Q ss_pred eeeecCCCcccCCCCCCcCCCCccccccccCccccccccccCCCCHHHHHHHHHHhcCCceeEEeecchhhhhhcCCCCC
Q psy10043 116 VVVYTGAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYKLYRHGFVKHVVSQNCDDLHLRSGLPRS 195 (504)
Q Consensus 116 iVV~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~L~~~G~l~~viTQNIDgLh~rAG~~~~ 195 (504)
+. ++||.+|++|++|+++|++.+||||||||||++||+ +
T Consensus 74 --------------------------------------~~-~~Pn~~H~~La~L~~~g~~~~viTQNvD~Lh~~AG~--~ 112 (253)
T 1ma3_A 74 --------------------------------------LF-AEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGS--R 112 (253)
T ss_dssp --------------------------------------HT-CCCCHHHHHHHHHHHTTSEEEEEESCCSCHHHHHTC--C
T ss_pred --------------------------------------cc-CCCCHHHHHHHHHHhcCCCeEEEeccccccHhHhCC--C
Confidence 13 689999999999999999999999999999999998 4
Q ss_pred CccccCCccceeeccCCCCCcccccccchhhhhhhhhccCCCCC-CCCC-CccccEEEecCCCCCCChhhHHHHHHHHhc
Q psy10043 196 VLSEVHGNMSVEVCAHCDPVKYYWRVFDVTEHTARYAHQTARKC-SCGE-PLLDTIIHFGEKGVLLWPLNWDGANKNADR 273 (504)
Q Consensus 196 ~viElHG~l~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~P~C-~Cgg-~LrP~IV~FGE~~~~~~~~~~~~a~~~~~~ 273 (504)
+|+|+||+++..+|+.|+..++. . +.........+|+| .||| .|||+||||||++ +...|+.|.+++++
T Consensus 113 ~v~elHG~~~~~~C~~C~~~~~~--~----~~~~~~~~~~~p~C~~Cgg~~lrP~Vv~FgE~l---p~~~~~~a~~~~~~ 183 (253)
T 1ma3_A 113 RVLELHGSMDKLDCLDCHETYDW--S----EFVEDFNKGEIPRCRKCGSYYVKPRVVLFGEPL---PQRTLFEAIEEAKH 183 (253)
T ss_dssp SEEETTEEEEEEEETTTCCEEEG--G----GTHHHHHTTCCCCCTTTCCSCEEEEECCBTSBC---CHHHHHHHHHHHHH
T ss_pred CEEEeCCCcCeeeeCCCCCcCcH--H----HHHHHhccCCCCCCCCCCCccccceEEEeCCCC---CHHHHHHHHHHHHh
Confidence 79999999999999999974221 1 10011123458999 9999 9999999999985 34578999999999
Q ss_pred CCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCCCCCceEEe
Q psy10043 274 ADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKKERPKLCIV 353 (504)
Q Consensus 274 aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~~~~~l~iv 353 (504)
||++|||||||+|+|++ .++..+...+ .++++|
T Consensus 184 adl~lviGTSl~V~P~~---~l~~~a~~~g--------------------------------------------~~~i~i 216 (253)
T 1ma3_A 184 CDAFMVVGSSLVVYPAA---ELPYIAKKAG--------------------------------------------AKMIIV 216 (253)
T ss_dssp CSEEEEESCCSCEETGG---GHHHHHHHHT--------------------------------------------CEEEEE
T ss_pred CCEEEEECCCceeccHH---HHHHHHHHcC--------------------------------------------CeEEEE
Confidence 99999999999997543 3322222223 345666
Q ss_pred ccccCCCCCcccEEEecCHHHHHHHHHHHc
Q psy10043 354 NLQWTPKDDQATLKINGKCDVVFKQLMAHL 383 (504)
Q Consensus 354 N~q~t~~d~~adl~i~g~cD~v~~~L~~~L 383 (504)
|+++|+.|..+++.|.|+|++++++|+++|
T Consensus 217 N~~~~~~d~~~~~~i~~~~~~~l~~l~~~l 246 (253)
T 1ma3_A 217 NAEPTMADPIFDVKIIGKAGEVLPKIVEEV 246 (253)
T ss_dssp ESSCCTTGGGCSEEEESCHHHHHHHHHHHH
T ss_pred eCCCCCCCCceeEEEeCCHHHHHHHHHHHH
Confidence 677777777789999999999999999886
No 8
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=100.00 E-value=8.7e-56 Score=438.31 Aligned_cols=238 Identities=27% Similarity=0.369 Sum_probs=197.2
Q ss_pred HHHHHHHHhCCcEEEEccCCcccccccCCcccccchhhhhhcccccccccccCCChHHHHHHHHHHHHHHHhccceeeec
Q psy10043 41 KKLAEAIQNAKHVVVYTGAGISTAAKIPDYRSNFTIYRLKKINKVKSRNEELEDKPEILAAKCKQLAEAIQNAKHVVVYT 120 (504)
Q Consensus 41 ~~l~~~l~~~~~ivv~TGAGiS~~SGiPdfR~~~g~Wr~~kpe~laS~l~efeDdPe~l~eki~~LaelI~~Ak~iVV~T 120 (504)
++++++|++|++|||+|||||||+||||||||++|+|++++++.+.+. ..|..+|+.+|.++..+...
T Consensus 3 ~~l~~~i~~a~~ivvltGAGiS~~SGIPdfR~~~Glw~~~~~~~~~~~-~~f~~~p~~~w~~~~~~~~~----------- 70 (249)
T 1m2k_A 3 EKLLKTIAESKYLVALTGAGVSAESGIPTFRGKDGLWNRYRPEELANP-QAFAKDPEKVWKWYAWRMEK----------- 70 (249)
T ss_dssp HHHHHHHHTCSSEEEEECGGGGGGGTCCCSSSTTCHHHHSCHHHHSSH-HHHHHCHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHhCCCEEEEECchhhhhhCCCCccCCCcCccCCCHHhcccH-HHHhcCHHHHHHHHHHHHHH-----------
Confidence 578899999999999999999999999999999999999999888886 77889999999877655432
Q ss_pred CCCcccCCCCCCcCCCCccccccccCccccccccccCCCCHHHHHHHHHHhcCCceeEEeecchhhhhhcCCCCCCcccc
Q psy10043 121 GAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYKLYRHGFVKHVVSQNCDDLHLRSGLPRSVLSEV 200 (504)
Q Consensus 121 GAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~L~~~G~l~~viTQNIDgLh~rAG~~~~~viEl 200 (504)
+..++||.+|++|++|+++|++.+||||||||||++||+ ++|+|+
T Consensus 71 ---------------------------------~~~~~Pn~~H~~La~L~~~g~~~~viTQNiDgLh~~AG~--~~v~el 115 (249)
T 1m2k_A 71 ---------------------------------VFNAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAGS--RNVIHL 115 (249)
T ss_dssp ---------------------------------HHHCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTC--CSEEET
T ss_pred ---------------------------------hCcCCCCHHHHHHHHHHhCCCCcEEEECCccchhhhcCC--CcEEEe
Confidence 134689999999999999999999999999999999997 579999
Q ss_pred CCccceeeccCCCCCcccccccchhhhhhhhhccCCCCC-CCCCCccccEEEecCCCCCCChhhHHHHHHHHhcCCeeEE
Q psy10043 201 HGNMSVEVCAHCDPVKYYWRVFDVTEHTARYAHQTARKC-SCGEPLLDTIIHFGEKGVLLWPLNWDGANKNADRADLILC 279 (504)
Q Consensus 201 HG~l~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~P~C-~Cgg~LrP~IV~FGE~~~~~~~~~~~~a~~~~~~aDllLV 279 (504)
||+++..+|+.|+.. |..... .....+|+| .|||.|||+||||||.+ +...|+.|.+++++||++||
T Consensus 116 HG~~~~~~C~~C~~~--~~~~~~-------~~~~~~p~C~~Cgg~lrP~Vv~FgE~l---p~~~~~~a~~~~~~adlllv 183 (249)
T 1m2k_A 116 HGSLRVVRCTSCNNS--FEVESA-------PKIPPLPKCDKCGSLLRPGVVWAGEML---PPDVLDRAMREVERADVIIV 183 (249)
T ss_dssp TEEEEEEEESSSSCE--EECSSC-------CCSSSCCBCSSSSSBEEEEECCTTSCC---CHHHHHHHHHHHHHCSEEEE
T ss_pred cCCcceeEeCCCCCc--ccchhh-------ccCCCCCCCCCCCCCcCCeEEecCCCC---CHHHHHHHHHHHhcCCEEEE
Confidence 999999999999974 221111 112347999 99999999999999985 45678999999999999999
Q ss_pred EcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCCCCCceEEeccccCC
Q psy10043 280 VGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKKERPKLCIVNLQWTP 359 (504)
Q Consensus 280 vGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~~~~~l~ivN~q~t~ 359 (504)
|||||+|+|++ .++..+...+ .++++||+++|+
T Consensus 184 iGTSl~V~P~~---~l~~~a~~~g--------------------------------------------~~~i~IN~~~~~ 216 (249)
T 1m2k_A 184 AGTSAVVQPAA---SLPLIVKQRG--------------------------------------------GAIIEINPDETP 216 (249)
T ss_dssp ESCCSCSTTGG---GHHHHHHHTT--------------------------------------------CEEEEECSSCCT
T ss_pred EccCCCccchH---HHHHHHHHcC--------------------------------------------CeEEEEeCCCCC
Confidence 99999997543 3222222233 344666666667
Q ss_pred CCCcccEEEecCHHHHHHHHHHHcC
Q psy10043 360 KDDQATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 360 ~d~~adl~i~g~cD~v~~~L~~~Lg 384 (504)
.|..+|+.|.|+|++++++|+++|.
T Consensus 217 ~d~~~~~~i~~~~~~~l~~l~~~l~ 241 (249)
T 1m2k_A 217 LTPIADYSLRGKAGEVMDELVRHVR 241 (249)
T ss_dssp TGGGCSEEECSCHHHHHHHHHHHHH
T ss_pred CCcceeEEEeCCHHHHHHHHHHHHH
Confidence 7777899999999999999998764
No 9
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=100.00 E-value=3.2e-56 Score=449.64 Aligned_cols=255 Identities=25% Similarity=0.332 Sum_probs=199.9
Q ss_pred cccCChHHHHHHHHHHHHHHHhCCcEEEEccCCcccccccCCccc-ccchhhhhhcccccccccccCCChHHHHHHHHHH
Q psy10043 28 ELEDEPEVLAAKCKKLAEAIQNAKHVVVYTGAGISTAAKIPDYRS-NFTIYRLKKINKVKSRNEELEDKPEILAAKCKQL 106 (504)
Q Consensus 28 e~~~~~~~~~~~~~~l~~~l~~~~~ivv~TGAGiS~~SGiPdfR~-~~g~Wr~~kpe~laS~l~efeDdPe~l~eki~~L 106 (504)
+.++.+.....++++++++|++|++|||+|||||||+|||||||+ ++|+|++++++.+++. ..|..+|+.+|.++..+
T Consensus 23 ~~~~~~~~~~~~i~~l~~~i~~a~~ivvlTGAGiSt~SGIPdFR~~~~Glw~~~~p~~~~~~-~~f~~~p~~~w~~~~~~ 101 (290)
T 3u31_A 23 ISFLKKDTQSITLEELAKIIKKCKHVVALTGSGTSAESNIPSFRGSSNSIWSKYDPRIYGTI-WGFWKYPEKIWEVIRDI 101 (290)
T ss_dssp ----CCCCEEECHHHHHHHHHTCSSEEEEECGGGTGGGTCCSCTTCTTSGGGGSCHHHHTBH-HHHHHCHHHHHHHHHHH
T ss_pred hhccCcchhHHHHHHHHHHHHhCCCEEEEeCCccccccCCccccccccchhhcCCHHHhhCH-HhhhhCHHHHHHHHHHH
Confidence 344444444466889999999999999999999999999999999 7999999999988886 77889999999777654
Q ss_pred HHHHHhccceeeecCCCcccCCCCCCcCCCCccccccccCccccccccccCCCCHHHHHHHHHHhcCCceeEEeecchhh
Q psy10043 107 AEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYKLYRHGFVKHVVSQNCDDL 186 (504)
Q Consensus 107 aelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~L~~~G~l~~viTQNIDgL 186 (504)
... ..++||.+|++|++|+++|++.+|||||||||
T Consensus 102 ~~~---------------------------------------------~~a~Pn~~H~aLa~Le~~g~~~~viTQNVDgL 136 (290)
T 3u31_A 102 SSD---------------------------------------------YEIEINNGHVALSTLESLGYLKSVVTQNVDGL 136 (290)
T ss_dssp HHH---------------------------------------------SCCCCCHHHHHHHHHHHTTCEEEEEESCCSCH
T ss_pred hhh---------------------------------------------ccCCCCHHHHHHHHHHHcCCCceEEEechHHH
Confidence 321 34689999999999999999999999999999
Q ss_pred hhhcCCCCCCccccCCccceeeccCCCCCcccccccchhhhhhhhhccCCCCCCCCCCccccEEEecCCCCCCChhhHHH
Q psy10043 187 HLRSGLPRSVLSEVHGNMSVEVCAHCDPVKYYWRVFDVTEHTARYAHQTARKCSCGEPLLDTIIHFGEKGVLLWPLNWDG 266 (504)
Q Consensus 187 h~rAG~~~~~viElHG~l~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~P~C~Cgg~LrP~IV~FGE~~~~~~~~~~~~ 266 (504)
|++||+ ++|+|+|||++..+|+.|+..++....+ ...........+|+|.|||.|||+||||||.+ +...|+.
T Consensus 137 h~rAG~--~~vielHGs~~~~~C~~C~~~~~~~~~~--~~~~~~~~~~~~P~C~Cgg~lrPdVV~FGE~l---p~~~~~~ 209 (290)
T 3u31_A 137 HEASGN--TKVISLHGNVFEAVCCTCNKIVKLNKIM--LQKTSHFMHQLPPECPCGGIFKPNIILFGEVV---SSDLLKE 209 (290)
T ss_dssp HHHTTC--SCEEETTEEEEEEEETTTCCEEECCTGG--GSTTSSTTTSSSCBCTTSCBEEEEECCBTSBC---CHHHHHH
T ss_pred HHHcCC--CcEEEecCCcCcceeCCCCCcCChhHhh--hcccccccccCCCCCCCCCEECCeEEEcCCCC---CHHHHHH
Confidence 999998 4799999999999999999653221111 11111223346899999999999999999985 3457899
Q ss_pred HHHHHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCCC
Q psy10043 267 ANKNADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKKE 346 (504)
Q Consensus 267 a~~~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~~ 346 (504)
|.+++++|||+|||||||+|+| ++.++..+...+++
T Consensus 210 a~~~~~~aDllLviGTSl~V~P---aa~l~~~a~~~g~~----------------------------------------- 245 (290)
T 3u31_A 210 AEEEIAKCDLLLVIGTSSTVST---ATNLCHFACKKKKK----------------------------------------- 245 (290)
T ss_dssp HHHHHHHCSEEEEESCCSCSHH---HHHHHHHHHHTTCC-----------------------------------------
T ss_pred HHHHHhcCCEEEEECcCCcchh---HHHHHHHHHHcCCE-----------------------------------------
Confidence 9999999999999999999965 44443333334444
Q ss_pred CCceEEeccccCCCCC-cccEEEecCHHHHHHHHHHHc
Q psy10043 347 RPKLCIVNLQWTPKDD-QATLKINGKCDVVFKQLMAHL 383 (504)
Q Consensus 347 ~~~l~ivN~q~t~~d~-~adl~i~g~cD~v~~~L~~~L 383 (504)
+++||+++|+.|+ .+|++|+|+|++++. |++.|
T Consensus 246 ---~v~IN~~~t~~~~~~~d~~i~g~a~~vl~-~~~~l 279 (290)
T 3u31_A 246 ---IVEINISKTYITNKMSDYHVCAKFSELTK-VANIL 279 (290)
T ss_dssp ---EEEEESSCCTTTTTTCSEEEESCGGGHHH-HHHHH
T ss_pred ---EEEECCCCCCCCCccceEEEECCHHHHHH-HHHHH
Confidence 4566666666654 578999999999886 44444
No 10
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=100.00 E-value=1.1e-55 Score=443.07 Aligned_cols=245 Identities=22% Similarity=0.358 Sum_probs=196.9
Q ss_pred HHHHHHHHHHhCCcEEEEccCCcccccccCCcccccchhhhhhcccccccccccCCChHHHHHHHHHHHHHHHhccceee
Q psy10043 39 KCKKLAEAIQNAKHVVVYTGAGISTAAKIPDYRSNFTIYRLKKINKVKSRNEELEDKPEILAAKCKQLAEAIQNAKHVVV 118 (504)
Q Consensus 39 ~~~~l~~~l~~~~~ivv~TGAGiS~~SGiPdfR~~~g~Wr~~kpe~laS~l~efeDdPe~l~eki~~LaelI~~Ak~iVV 118 (504)
.+++++++|++|++|||+|||||||+||||||||++|+|++++++.+.+. ..|..+|+.+|.++......
T Consensus 10 ~i~~l~~~l~~a~~ivvlTGAGiSt~SGIPdFR~~~Glw~~~~~~~l~~~-~~f~~~p~~~w~fy~~~~~~--------- 79 (273)
T 3riy_A 10 SMADFRKFFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATP-LAFAHNPSRVWEFYHYRREV--------- 79 (273)
T ss_dssp CHHHHHHHHHHCSEEEEEECGGGTGGGTCCCSSSGGGEETTEEHHHHSSH-HHHHHCHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHhCCcEEEEECcccchhhCCCccccccchhhhCChhhcCCH-HHHhhCHHHHHHHHHHHHHH---------
Confidence 46789999999999999999999999999999999999999999888886 77889999999877654432
Q ss_pred ecCCCcccCCCCCCcCCCCccccccccCccccccccccCCCCHHHHHHHHHHh----cCCceeEEeecchhhhhhcCCCC
Q psy10043 119 YTGAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYKLYR----HGFVKHVVSQNCDDLHLRSGLPR 194 (504)
Q Consensus 119 ~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~L~~----~G~l~~viTQNIDgLh~rAG~~~ 194 (504)
+..++||.+|++|++|++ +|++.+||||||||||++||+
T Consensus 80 -----------------------------------~~~~~Pn~~H~~La~Le~~~~~~g~~~~viTQNiDgLh~~AG~-- 122 (273)
T 3riy_A 80 -----------------------------------MGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGT-- 122 (273)
T ss_dssp -----------------------------------HTTCCCCHHHHHHHHHHHHHHTTTCEEEEEESCCSCHHHHHTC--
T ss_pred -----------------------------------hhhCCCCHHHHHHHHHHHhhhhcCceeEEEEecccchHhhcCC--
Confidence 124689999999999995 699999999999999999998
Q ss_pred CCccccCCccceeeccCCCCCcccccc--cch-h--------hhhhhhhccCCCCC---CCCCCccccEEEecCCCCCCC
Q psy10043 195 SVLSEVHGNMSVEVCAHCDPVKYYWRV--FDV-T--------EHTARYAHQTARKC---SCGEPLLDTIIHFGEKGVLLW 260 (504)
Q Consensus 195 ~~viElHG~l~~~~C~~C~~~~~~~~~--~~~-~--------~~~~~~~~~~~P~C---~Cgg~LrP~IV~FGE~~~~~~ 260 (504)
++|+|+|||++..+|+.|+..+..... ... . ..........+|+| .|||.|||+||||||++ +
T Consensus 123 ~~vielHG~~~~~~C~~C~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~C~~~~Cgg~lrP~VV~FGE~l---p 199 (273)
T 3riy_A 123 KNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENL---D 199 (273)
T ss_dssp CSEEETTEEEEEEEETTTCCEEECCCSSSSGGGTTCCCCSTTCCCCCCCGGGSCBCCGGGCCCBEEEEECCTTSBC---C
T ss_pred CCEEEecCcCCeeEcCCCCCcccccccchhhhhhcccCCcccccccccccCCCCCCCCCCCCCeeCCcEEEeCCcC---C
Confidence 479999999999999999975321100 000 0 00001123457999 49999999999999985 4
Q ss_pred hhhHHHHHHHHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCC
Q psy10043 261 PLNWDGANKNADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGL 340 (504)
Q Consensus 261 ~~~~~~a~~~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~ 340 (504)
+..|+.|.+++++|||+|||||||+|+|+ +.++..+...
T Consensus 200 ~~~~~~a~~~~~~aDl~lviGTSl~V~Pa---a~l~~~a~~~-------------------------------------- 238 (273)
T 3riy_A 200 PAILEEVDRELAHCDLCLVVGTSSVVYPA---AMFAPQVAAR-------------------------------------- 238 (273)
T ss_dssp HHHHHHHHHHHHHCSEEEEESCCSCEETG---GGHHHHHHHT--------------------------------------
T ss_pred HHHHHHHHHHHhcCCEEEEEeeCCcchhH---HHhHHHHHHC--------------------------------------
Confidence 56789999999999999999999999654 3332222222
Q ss_pred CCCCCCCCceEEeccccCCCCCcccEEEecCHHHHHHHHH
Q psy10043 341 DRPKKERPKLCIVNLQWTPKDDQATLKINGKCDVVFKQLM 380 (504)
Q Consensus 341 ~~~~~~~~~l~ivN~q~t~~d~~adl~i~g~cD~v~~~L~ 380 (504)
+.++++||+++|+.|..++++|+|+|++++++|+
T Consensus 239 ------g~~~v~IN~~~t~~d~~~~~~i~g~~~~~l~~l~ 272 (273)
T 3riy_A 239 ------GVPVAEFNTETTPATNRFRFHFQGPCGTTLPEAL 272 (273)
T ss_dssp ------TCCEEEEESSCCTTGGGSSEEEESCHHHHHHHHH
T ss_pred ------CCEEEEECCCCCCCCcceeEEEeCCHHHHHHHHh
Confidence 4455777778888888899999999999999885
No 11
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=100.00 E-value=2.8e-55 Score=449.37 Aligned_cols=264 Identities=24% Similarity=0.345 Sum_probs=204.9
Q ss_pred HHHHHHHHHHh--CCcEEEEccCCcccccccCCcccc-cchhhhhh------cccccccccccCCChHHHHHHHHHHHHH
Q psy10043 39 KCKKLAEAIQN--AKHVVVYTGAGISTAAKIPDYRSN-FTIYRLKK------INKVKSRNEELEDKPEILAAKCKQLAEA 109 (504)
Q Consensus 39 ~~~~l~~~l~~--~~~ivv~TGAGiS~~SGiPdfR~~-~g~Wr~~k------pe~laS~l~efeDdPe~l~eki~~Lael 109 (504)
.+++++++|++ |++|||+|||||||+||||||||+ +|+|++.. ++.+.+. ..|..+|+.+|.++.. .
T Consensus 30 ~l~~l~~~i~~~~a~~ivvltGAGiSt~SGIPdfR~~~~Glw~~~~~~~l~~p~~~~~~-~~f~~~p~~f~~~~r~---~ 105 (323)
T 1j8f_A 30 TLEGVARYMQSERCRRVICLVGAGISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEI-SYFKKHPEPFFALAKE---L 105 (323)
T ss_dssp SHHHHHHHHHSTTCCCEEEEECGGGTGGGTCCCTTCSCSTTSTTTTTTCCSSGGGGGBH-HHHHHCCHHHHHHHHH---H
T ss_pred HHHHHHHHHHhcCCCcEEEEecchhhHhhCCCcccCCCccHHHHhhhcCCCCHHHHcCH-HHHhcCHHHHHHHHHH---H
Confidence 47899999996 899999999999999999999999 59999754 3444443 4566667666654211 0
Q ss_pred HHhccceeeecCCCcccCCCCCCcCCCCccccccccCccccccccccCCCCHHHHHHHHHHhcCCceeEEeecchhhhhh
Q psy10043 110 IQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYKLYRHGFVKHVVSQNCDDLHLR 189 (504)
Q Consensus 110 I~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~L~~~G~l~~viTQNIDgLh~r 189 (504)
| ...++||.+|++|++|+++|++.+||||||||||++
T Consensus 106 ------------------------------~-------------~~~a~Pn~~H~aLa~L~~~g~~~~viTQNIDgLh~~ 142 (323)
T 1j8f_A 106 ------------------------------Y-------------PGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERI 142 (323)
T ss_dssp ------------------------------S-------------SSSCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHH
T ss_pred ------------------------------h-------------hCcCCCCHHHHHHHHHHhcCCCcEEEeecccchHHH
Confidence 0 125789999999999999999999999999999999
Q ss_pred cCCCCCCccccCCccceeeccC--CCCCcccccccchhhhhhhhhccCCCCC-CCCCCccccEEEecCCCCCCChhhHHH
Q psy10043 190 SGLPRSVLSEVHGNMSVEVCAH--CDPVKYYWRVFDVTEHTARYAHQTARKC-SCGEPLLDTIIHFGEKGVLLWPLNWDG 266 (504)
Q Consensus 190 AG~~~~~viElHG~l~~~~C~~--C~~~~~~~~~~~~~~~~~~~~~~~~P~C-~Cgg~LrP~IV~FGE~~~~~~~~~~~~ 266 (504)
||++.++|+|+||+++..+|+. |+.. |...+. ........+|+| .|||.|||+||||||++ +...|+.
T Consensus 143 AG~~~~~VielHGs~~~~~C~~~~C~~~--~~~~~~----~~~i~~~~~P~C~~Cgg~lrP~VV~FGE~l---p~~~~~~ 213 (323)
T 1j8f_A 143 AGLEQEDLVEAHGTFYTSHCVSASCRHE--YPLSWM----KEKIFSEVTPKCEDCQSLVKPDIVFFGESL---PARFFSC 213 (323)
T ss_dssp TTCCGGGEEETTEEEEEEEESCTTTCCE--ECHHHH----HHHHHTTCCCBCTTTCCBEEEEECCBTSCC---CHHHHHH
T ss_pred cCCCcccEEEeeCCcceeecCCCccCcc--ccHHHH----HHhhccCCCCCCcCCCCccCCCEEecCCcC---CHHHHHH
Confidence 9998889999999999999999 9964 221111 111234568999 99999999999999995 3456888
Q ss_pred HHHHHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCCC
Q psy10043 267 ANKNADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKKE 346 (504)
Q Consensus 267 a~~~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~~ 346 (504)
|.+++++||++|||||||+|+| ++.++..+...++. ++||+++++.+....-.+. +
T Consensus 214 a~~~~~~aDlllviGTSl~V~P---~a~l~~~~~~~~~~-v~IN~~~t~~~~~~~~~~~---------~----------- 269 (323)
T 1j8f_A 214 MQSDFLKVDLLLVMGTSLQVQP---FASLISKAPLSTPR-LLINKEKAGQSDPFLGMIM---------G----------- 269 (323)
T ss_dssp HHHGGGSCSEEEEESSCSCSHH---HHHHHTTSCTTCCE-EEEESSCCCCCCHHHHHHH---------H-----------
T ss_pred HHHHHhCCCEEEEEeeCcccHH---HHHHHHHHHcCCcE-EEEeCCCCCCCcccccccc---------c-----------
Confidence 9999999999999999999964 55555555555665 5899999886542100000 0
Q ss_pred CCceEEeccccCCCCCcccEEEecCHHHHHHHHHHHcCCC
Q psy10043 347 RPKLCIVNLQWTPKDDQATLKINGKCDVVFKQLMAHLNLD 386 (504)
Q Consensus 347 ~~~l~ivN~q~t~~d~~adl~i~g~cD~v~~~L~~~Lg~~ 386 (504)
.--|+++.+.+..+|+.|.|+||+++.+|+++|||+
T Consensus 270 ----~~~~~~~~~~~~~~d~~i~gd~~~~l~~L~~~lgw~ 305 (323)
T 1j8f_A 270 ----LGGGMDFDSKKAYRDVAWLGECDQGCLALAELLGWK 305 (323)
T ss_dssp ----HHTCCCSSSTTCCSEEEEESCHHHHHHHHHHHTTCH
T ss_pred ----ccccccccccccceeEEEeCCHHHHHHHHHHHcCCc
Confidence 001455666667789999999999999999999996
No 12
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=100.00 E-value=4e-55 Score=442.22 Aligned_cols=251 Identities=24% Similarity=0.311 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHh--CCcEEEEccCCcccccccCCccccc-chhhhhhc------ccccccccccCCChHHHHHHHHHH
Q psy10043 36 LAAKCKKLAEAIQN--AKHVVVYTGAGISTAAKIPDYRSNF-TIYRLKKI------NKVKSRNEELEDKPEILAAKCKQL 106 (504)
Q Consensus 36 ~~~~~~~l~~~l~~--~~~ivv~TGAGiS~~SGiPdfR~~~-g~Wr~~kp------e~laS~l~efeDdPe~l~eki~~L 106 (504)
|+.++++++++|++ |++|||+|||||||+||||||||++ |+|++..+ +.+.+. ..|..+|+.+|.++.++
T Consensus 4 ~~~~i~~l~~~i~~~~a~~ivvltGAGiSt~SGIPdfR~~~~Glw~~~~~~~l~~~e~~~~~-~~f~~~p~~f~~~~~~~ 82 (289)
T 1q1a_A 4 TEMSVRKIAAHMKSNPNAKVIFMVGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDV-DFFQSDPLPFYTLAKEL 82 (289)
T ss_dssp THHHHHHHHHHHHHSTTSCEEEEECGGGGGGGTCCCSSSTTTSGGGSCGGGCCSSGGGGGBH-HHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEECCceeHhhCCCCcCCCCCcccccccccCCCCHHHhcCH-HHHhcCHHHHHHHHHHH
Confidence 56778999999999 9999999999999999999999995 99987543 334443 45667777766554321
Q ss_pred HHHHHhccceeeecCCCcccCCCCCCcCCCCccccccccCccccccccccCCCCHHHHHHHHHHhcCCceeEEeecchhh
Q psy10043 107 AEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYKLYRHGFVKHVVSQNCDDL 186 (504)
Q Consensus 107 aelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~L~~~G~l~~viTQNIDgL 186 (504)
. ...++||.+|++|++|+++|++.+|||||||||
T Consensus 83 ~----------------------------------------------~~~a~Pn~~H~~La~L~~~g~~~~viTQNVDgL 116 (289)
T 1q1a_A 83 Y----------------------------------------------PGNFRPSKFHYLLKLFQDKDVLKRVYTQNIDTL 116 (289)
T ss_dssp C----------------------------------------------SSSCCCCHHHHHHHHHHHTTCEEEEEECCSSCH
T ss_pred h----------------------------------------------hCcCCCCHHHHHHHHHHhCCCccEEEecCccch
Confidence 0 124689999999999999999999999999999
Q ss_pred hhhcCCCCCCccccCCccceeeccCCCCCcccccccchhhhhhhh--hccCCCCC-CCCCCccccEEEecCCCCCCChhh
Q psy10043 187 HLRSGLPRSVLSEVHGNMSVEVCAHCDPVKYYWRVFDVTEHTARY--AHQTARKC-SCGEPLLDTIIHFGEKGVLLWPLN 263 (504)
Q Consensus 187 h~rAG~~~~~viElHG~l~~~~C~~C~~~~~~~~~~~~~~~~~~~--~~~~~P~C-~Cgg~LrP~IV~FGE~~~~~~~~~ 263 (504)
|++||++.++|+|+||+++..+|+.|++.++ ..... ..+. ....+|+| .|||.|||+||||||.+|......
T Consensus 117 h~~AG~~~~~v~elHG~~~~~~C~~C~~~~~--~~~~~---~~~~~~~~~~~P~C~~Cgg~lrP~vv~FGE~lp~~~~~~ 191 (289)
T 1q1a_A 117 ERQAGVKDDLIIEAHGSFAHCHCIGCGKVYP--PQVFK---SKLAEHPIKDFVKCDVCGELVKPAIVFFGEDLPDSFSET 191 (289)
T ss_dssp HHHTTCCGGGEEETTEEEEEEEETTTCCEEC--HHHHH---HHHTCSSCCSCCBCTTTCCBEEEEECCBTSBCCHHHHHH
T ss_pred HHHcCCCcccEEEecCCcCceEECCCCCCCc--HHHHH---HHHhhccCCCCccCCCCCCEECCCEEEcCCCCCHHHHHH
Confidence 9999998889999999999999999986422 11000 0011 12357999 999999999999999853211111
Q ss_pred HHHH----------HHHHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhc
Q psy10043 264 WDGA----------NKNADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRK 333 (504)
Q Consensus 264 ~~~a----------~~~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~ 333 (504)
+..+ .+.+.+||++|||||||+|+|+ +.++..+. .+.++++||
T Consensus 192 ~~~~~~~l~~~~~a~~~~~~~DlllviGTSl~V~Pa---~~l~~~~~-~~~~~v~IN----------------------- 244 (289)
T 1q1a_A 192 WLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPF---ASLPEEIP-RKVKRVLCN----------------------- 244 (289)
T ss_dssp HHHHHHHHHHHHHC----CCCCEEEEESCCCCEETT---THHHHHSC-TTSEEEEES-----------------------
T ss_pred HHHhhhhhhhhhhHHHHhccCCEEEEEccCCChhhH---HHHHHHHh-cCCCEEEEE-----------------------
Confidence 2222 2447799999999999999754 33332222 244454455
Q ss_pred cccccCCCCCCCCCCceEEeccccCC----CCCcccEEEecCHHHHHHHHHHHcCCC
Q psy10043 334 YGWLWGLDRPKKERPKLCIVNLQWTP----KDDQATLKINGKCDVVFKQLMAHLNLD 386 (504)
Q Consensus 334 ~~~~~~~~~~~~~~~~l~ivN~q~t~----~d~~adl~i~g~cD~v~~~L~~~Lg~~ 386 (504)
+++|+ .+..+|++|+|+||++|++|+++|||+
T Consensus 245 ---------------------~~~~~~~~~~~~~~d~~i~~~~~~~l~~l~~~l~~~ 280 (289)
T 1q1a_A 245 ---------------------LETVGDFKANKRPTDLIVHQYSDEFAEQLVEELGWQ 280 (289)
T ss_dssp ---------------------SSCCTHHHHSCCTTCEEECCCHHHHHHHHHHHHTCH
T ss_pred ---------------------CCCcccCCCCCcceeEEEeCCHHHHHHHHHHHcCCH
Confidence 44443 234588999999999999999999995
No 13
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=100.00 E-value=4e-54 Score=446.05 Aligned_cols=257 Identities=23% Similarity=0.275 Sum_probs=178.7
Q ss_pred ccccCChHHHHHHHHHHHHHHHh--CCcEEEEccCCcccccccCCccccc-chhhhhhc------ccccccccccCCChH
Q psy10043 27 EELEDEPEVLAAKCKKLAEAIQN--AKHVVVYTGAGISTAAKIPDYRSNF-TIYRLKKI------NKVKSRNEELEDKPE 97 (504)
Q Consensus 27 ~e~~~~~~~~~~~~~~l~~~l~~--~~~ivv~TGAGiS~~SGiPdfR~~~-g~Wr~~kp------e~laS~l~efeDdPe 97 (504)
.+...++..|+.++++++++|++ |++|||+|||||||+||||||||++ |+|+...+ +.+.+. ..|..+|+
T Consensus 3 ~~~~~~~~~~~~~i~~l~~~i~~~~a~~IVvlTGAGISteSGIPdFR~~~~Glw~~~~~~~l~~pe~~~s~-~~f~~~P~ 81 (361)
T 1q14_A 3 ASMSVSTASTEMSVRKIAAHMKSNPNAKVIFMVGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDV-DFFQSDPL 81 (361)
T ss_dssp TSCCCSSCCHHHHHHHHHHHHHTSTTCCEEEEECGGGTGGGC--------------CCCCCCSSGGGGGBH-HHHHHCCH
T ss_pred CccCCCchhHHHHHHHHHHHHHhccCCcEEEEeCcccchhcCCcccccCcchhhhcccccCCCCHHHhcCH-HHHhcCHH
Confidence 34556677888899999999999 9999999999999999999999995 99987543 333332 34555665
Q ss_pred HHHHHHHHHHHHHHhccceeeecCCCcccCCCCCCcCCCCccccccccCccccccccccCCCCHHHHHHHHHHhcCCcee
Q psy10043 98 ILAAKCKQLAEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYKLYRHGFVKH 177 (504)
Q Consensus 98 ~l~eki~~LaelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~L~~~G~l~~ 177 (504)
.+|.++.++ ....++||.+|++|++|+++|++.+
T Consensus 82 ~f~~~~~~~----------------------------------------------~~~~a~Pn~~H~aLa~Le~~g~~~~ 115 (361)
T 1q14_A 82 PFYTLAKEL----------------------------------------------YPGNFRPSKFHYLLKLFQDKDVLKR 115 (361)
T ss_dssp HHHHHHTTT----------------------------------------------SCCCCCCCHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHH----------------------------------------------hhCcCCCCHHHHHHHHHHhcCCCcE
Confidence 555432110 0135789999999999999999999
Q ss_pred EEeecchhhhhhcCCCCCCccccCCccceeeccCCCCCcccccccchhhhhhhh--hccCCCCC-CCCCCccccEEEecC
Q psy10043 178 VVSQNCDDLHLRSGLPRSVLSEVHGNMSVEVCAHCDPVKYYWRVFDVTEHTARY--AHQTARKC-SCGEPLLDTIIHFGE 254 (504)
Q Consensus 178 viTQNIDgLh~rAG~~~~~viElHG~l~~~~C~~C~~~~~~~~~~~~~~~~~~~--~~~~~P~C-~Cgg~LrP~IV~FGE 254 (504)
||||||||||++||++.++|+|+||+++..+|+.|+..+.. .... ..+. ....+|+| .|||.|||+||||||
T Consensus 116 ViTQNVDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~--~~~~---~~~~~~~~~~~P~Cp~Cgg~lrP~VV~FGE 190 (361)
T 1q14_A 116 VYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPP--QVFK---SKLAEHPIKDFVKCDVCGELVKPAIVFFGE 190 (361)
T ss_dssp EEECCCSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEECT--HHHH---HHTTSSSCSCCCBCTTTCCBEEEEECCBTS
T ss_pred EEecccchhHhHcCCCcceEEeccccccccCcCCCCccCcH--HHHH---HHHhhcccCCCCCCcCCCCEeCCCcccccc
Confidence 99999999999999988899999999999999999864221 1000 0011 11346999 999999999999999
Q ss_pred CCCCCChhhHHHHHH-------------HHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccc
Q psy10043 255 KGVLLWPLNWDGANK-------------NADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQAT 321 (504)
Q Consensus 255 ~~~~~~~~~~~~a~~-------------~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~ 321 (504)
.+| ...+..+.+ .+.+||++|||||||+|+|+ +.++..+. .+.++++||
T Consensus 191 ~lp---~~~~~~~~~a~~~l~~~i~~~~~~~~aDllLviGTSl~V~Pa---a~l~~~~~-~g~~~v~IN----------- 252 (361)
T 1q14_A 191 DLP---DSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPF---ASLPEEIP-RKVKRVLCN----------- 252 (361)
T ss_dssp CCC---HHHHHHHHHHHHHHHHC--------CCCEEEEESCCCCSTTG---GGHHHHSC-TTSEEEEES-----------
T ss_pred cCC---HHHHHHHHHHHHhhhhcchhhhhhccCCEEEEECCCCCchhH---HHHHHHHh-cCCeEEEEe-----------
Confidence 953 334444433 46799999999999999754 33332222 244454455
Q ss_pred eeecCCCcchhccccccCCCCCCCCCCceEEeccccCC----CCCcccEEEecCHHHHHHHHHHHcCCC
Q psy10043 322 LKINGKYPVLRKYGWLWGLDRPKKERPKLCIVNLQWTP----KDDQATLKINGKCDVVFKQLMAHLNLD 386 (504)
Q Consensus 322 ~~i~~~~p~~~~~~~~~~~~~~~~~~~~l~ivN~q~t~----~d~~adl~i~g~cD~v~~~L~~~Lg~~ 386 (504)
+++|+ .+..+|++|+|+|+++|++|+++|||+
T Consensus 253 ---------------------------------~~~t~~~~~~~~~~d~~i~g~~~evl~~L~~~Lg~~ 288 (361)
T 1q14_A 253 ---------------------------------LETVGDFKANKRPTDLIVHQYSDEFAEQLVEELGWQ 288 (361)
T ss_dssp ---------------------------------SSCCHHHHHTCCTTCEEECSCHHHHHHHHHHHHTCH
T ss_pred ---------------------------------CCCccccccCcccccEEEeCCHHHHHHHHHHHcCCh
Confidence 44443 234588999999999999999999996
No 14
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=100.00 E-value=3.6e-54 Score=423.31 Aligned_cols=228 Identities=25% Similarity=0.342 Sum_probs=179.4
Q ss_pred CCcEEEEccCCcccccccCCcccccchhhhhhcccccccccccCCChHHHHHHHHHHHHHHHhccceeeecCCCcccCCC
Q psy10043 50 AKHVVVYTGAGISTAAKIPDYRSNFTIYRLKKINKVKSRNEELEDKPEILAAKCKQLAEAIQNAKHVVVYTGAGISTAAK 129 (504)
Q Consensus 50 ~~~ivv~TGAGiS~~SGiPdfR~~~g~Wr~~kpe~laS~l~efeDdPe~l~eki~~LaelI~~Ak~iVV~TGAGISt~SG 129 (504)
|++|||+|||||||+||||||||++|+|++++++.+.+. ..|..+|+.+|.++......+.
T Consensus 1 a~~ivvltGAGiS~~SGIPdfR~~~Glw~~~~~~~~~~~-~~f~~~p~~~~~f~~~~~~~~~------------------ 61 (235)
T 1s5p_A 1 KPRVLVLTGAGISAESGIRTFRAADGLWEEHRVEDVATP-EGFDRDPELVQAFYNARRRQLQ------------------ 61 (235)
T ss_dssp CCCEEEEECTHHHHTTTCCCCCSSSCEETTEEHHHHSSH-HHHHHCHHHHHHHHHHHHHHHT------------------
T ss_pred CCcEEEEechhhhhhhCCCCCCCCCCCccCCCHhHcccH-HHHhhCHHHHHHHHHHHHHHhh------------------
Confidence 689999999999999999999999999999999988886 7889999999988875443210
Q ss_pred CCCcCCCCccccccccCccccccccccCCCCHHHHHHHHHHh-cCCceeEEeecchhhhhhcCCCCCCccccCCccceee
Q psy10043 130 IPDYRGTKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYKLYR-HGFVKHVVSQNCDDLHLRSGLPRSVLSEVHGNMSVEV 208 (504)
Q Consensus 130 IPDFRg~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~L~~-~G~l~~viTQNIDgLh~rAG~~~~~viElHG~l~~~~ 208 (504)
-..++||.+|++|++|++ .|++.+||||||||||++||. ++|+|+||+++..+
T Consensus 62 ------------------------~~~a~Pn~~H~~La~L~~~~g~~~~viTQNvD~Lh~~AG~--~~v~elHG~~~~~~ 115 (235)
T 1s5p_A 62 ------------------------QPEIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGN--TNVIHMHGELLKVR 115 (235)
T ss_dssp ------------------------STTCCCCHHHHHHHHHHHHHGGGEEEEESCCSSHHHHHTC--CSCEETTEEEEEEE
T ss_pred ------------------------hcCCCCCHHHHHHHHHHHhhCCceEEEeccccchhhhcCC--CcEEEecCCceEEE
Confidence 024789999999999999 699999999999999999995 57999999999999
Q ss_pred ccCCCCCcccccccchhhhhhhhhccCCCCC-CCCCCccccEEEecCCCCCCChhhHHHHHHHHhcCCeeEEEccccccc
Q psy10043 209 CAHCDPVKYYWRVFDVTEHTARYAHQTARKC-SCGEPLLDTIIHFGEKGVLLWPLNWDGANKNADRADLILCVGSSLKVL 287 (504)
Q Consensus 209 C~~C~~~~~~~~~~~~~~~~~~~~~~~~P~C-~Cgg~LrP~IV~FGE~~~~~~~~~~~~a~~~~~~aDllLVvGTSL~V~ 287 (504)
|+.|+..++.. .+ ......|.| .|||.|||+||||||+ + ..++++.+++++||++|||||||+|+
T Consensus 116 C~~C~~~~~~~--~~-------~~~~~~p~c~~Cgg~lrP~vv~FGE~-p----~~~~~a~~~~~~adl~lviGTSl~V~ 181 (235)
T 1s5p_A 116 CSQSGQVLDWT--GD-------VTPEDKCHCCQFPAPLRPHVVWFGEM-P----LGMDEIYMALSMADIFIAIGTSGHVY 181 (235)
T ss_dssp ETTTCCEEECC--SC-------CCSSCCC-------CEEEEECCTTSC-C----SSHHHHHHHHHHCSEEEEESCCTTEE
T ss_pred eCCCCCcccch--hh-------ccCCCCCCCCCCCCeecCcEEEeCCC-H----HHHHHHHHHHhcCCEEEEECcCCchh
Confidence 99999742211 11 112347788 9999999999999998 3 35889999999999999999999996
Q ss_pred ccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCCCCCceEEeccccCCCCCcccEE
Q psy10043 288 RKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLK 367 (504)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~~~~~l~ivN~q~t~~d~~adl~ 367 (504)
|+ +.++..+...+ .++++||+++|+.|..+|+.
T Consensus 182 Pa---~~l~~~a~~~g--------------------------------------------~~~i~iN~~~t~~~~~~~~~ 214 (235)
T 1s5p_A 182 PA---AGFVHEAKLHG--------------------------------------------AHTVELNLEPSQVGNEFAEK 214 (235)
T ss_dssp TG---GGHHHHHHHTT--------------------------------------------CEEEEEESSSCC---CCSEE
T ss_pred hH---HHHHHHHHHcC--------------------------------------------CeEEEEECCCCCCCccccEE
Confidence 54 33332222233 44566677777777788999
Q ss_pred EecCHHHHHHHHHHHc
Q psy10043 368 INGKCDVVFKQLMAHL 383 (504)
Q Consensus 368 i~g~cD~v~~~L~~~L 383 (504)
|+|+|+++|++|+++|
T Consensus 215 i~~~~~~~l~~l~~~l 230 (235)
T 1s5p_A 215 YYGPASQVVPEFVEKL 230 (235)
T ss_dssp EESCHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHH
Confidence 9999999999999887
No 15
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=99.58 E-value=2e-15 Score=153.51 Aligned_cols=116 Identities=25% Similarity=0.299 Sum_probs=76.7
Q ss_pred HHHHh-hhhccccccccccCChHHHHHHHHHHHHHHHhCCcEEEEccCCcccccccCCcccccchhhhhhccccccc-cc
Q psy10043 13 KERLK-KINKVKSRNEELEDEPEVLAAKCKKLAEAIQNAKHVVVYTGAGISTAAKIPDYRSNFTIYRLKKINKVKSR-NE 90 (504)
Q Consensus 13 ~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~l~~~l~~~~~ivv~TGAGiS~~SGiPdfR~~~g~Wr~~kpe~laS~-l~ 90 (504)
+.++| +-+|.+|+.+|++|+|+.+++++++++++|++|++|||||||||||+|||||||+++|+|+......-... ..
T Consensus 6 a~~l~~~~~~g~~~~~e~~d~p~~l~~~i~~l~~~i~~a~~ivvlTGAGISteSGIPdFR~~~Glw~~~~~~~~p~~~~~ 85 (318)
T 3k35_A 6 AAGLSPYADKGKCGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDFRGPHGVWTMEERGLAPKFDTT 85 (318)
T ss_dssp ---------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCSCEEEEECGGGSGGGTCCCSSSTTCHHHHHTTTCCCCCSSC
T ss_pred hhhCCcccccCccCCccccCCHHHHHHHHHHHHHHHHhCCCEEEEeccccChhhCCCccccCCCcchhhhccCCHHHHHH
Confidence 34444 47899999999999999999999999999999999999999999999999999999999986431110011 11
Q ss_pred ccCCChHHHHHHHHHHHHHHHhccceeeecC--CCcccCCCCC
Q psy10043 91 ELEDKPEILAAKCKQLAEAIQNAKHVVVYTG--AGISTAAKIP 131 (504)
Q Consensus 91 efeDdPe~l~eki~~LaelI~~Ak~iVV~TG--AGISt~SGIP 131 (504)
+....|.... ..|+++.+..+-..|+|- -|+...||.|
T Consensus 86 f~~a~Pn~~H---~aLa~Le~~g~~~~viTQNIDgLh~rAG~~ 125 (318)
T 3k35_A 86 FESARPTQTH---MALVQLERVGLLRFLVSQNVDGLHVRSGFP 125 (318)
T ss_dssp TTTCCCCHHH---HHHHHHHHTTCCCEEEECCCSCHHHHBTCC
T ss_pred hhhCCCCHHH---HHHHHHHHcCCceEEEEecccchHhhcCCC
Confidence 1223344333 444454444444455554 3555555543
No 16
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=99.56 E-value=3.6e-15 Score=153.13 Aligned_cols=68 Identities=37% Similarity=0.489 Sum_probs=60.2
Q ss_pred HHHHhh-hhccccccccccCChHHHHHHHHHHHHHHHhCCcEEEEccCCcccccccCCcccccchhhhh
Q psy10043 13 KERLKK-INKVKSRNEELEDEPEVLAAKCKKLAEAIQNAKHVVVYTGAGISTAAKIPDYRSNFTIYRLK 80 (504)
Q Consensus 13 ~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~l~~~l~~~~~ivv~TGAGiS~~SGiPdfR~~~g~Wr~~ 80 (504)
+.++|. -+|.+|+.+|++|+|+++++++++++++|++|++|||||||||||+|||||||+++|+|+..
T Consensus 6 a~~ls~~~~kg~~g~~E~~D~p~~l~~~i~~la~~i~~a~~iVvlTGAGISteSGIPDFR~~~Glw~~~ 74 (355)
T 3pki_A 6 AAGLSPYADKGKCGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDFRGPHGVWTME 74 (355)
T ss_dssp -------CCCCSCSCCCCCCCHHHHHHHHHHHHHHHHHCSSEEEEECGGGSGGGTCCCSSSTTCHHHHH
T ss_pred hhhCCcccccCcCCCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEeccccchhhCCCccccCCCccchh
Confidence 344444 78999999999999999999999999999999999999999999999999999999999864
No 17
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=99.11 E-value=1.2e-11 Score=121.76 Aligned_cols=65 Identities=29% Similarity=0.450 Sum_probs=39.5
Q ss_pred HHHHHHHHHhccceeeecCCCcccCCCCCCcCCCCccccccccCccccccccccCCCCHHHHHHHHH
Q psy10043 103 CKQLAEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYKL 169 (504)
Q Consensus 103 i~~LaelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~L 169 (504)
++++++++++++++||+|||||||+||||||||++|+|+++.. .+.........|...+.+.+..
T Consensus 3 i~~l~~~l~~a~~ivv~tGAGiS~~SGIpdfR~~~Glw~~~~~--~~~~~~~f~~~p~~~~~~~~~~ 67 (246)
T 1yc5_A 3 MKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQ--NVFDIDFFYSHPEEFYRFAKEG 67 (246)
T ss_dssp CHHHHHHHHHCSSEEEEECGGGTGGGTCCCC-----------C--CTTBHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEECceeehhhCCCCccCCCcccccCCC--ceecHHHHhhCHHHHHHHHHHH
Confidence 3578889999999999999999999999999999999997653 3333333344565555555544
No 18
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=99.10 E-value=2.3e-11 Score=121.62 Aligned_cols=43 Identities=33% Similarity=0.707 Sum_probs=39.9
Q ss_pred HHHHHHHHHhccceeeecCCCcccCCCCCCcCCCCcccccccc
Q psy10043 103 CKQLAEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQ 145 (504)
Q Consensus 103 i~~LaelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~ 145 (504)
+.++++++.++++|||+|||||||+||||||||++|+|+++..
T Consensus 11 i~~l~~~l~~a~~ivvlTGAGiSt~SGIPdFR~~~Glw~~~~~ 53 (273)
T 3riy_A 11 MADFRKFFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQA 53 (273)
T ss_dssp HHHHHHHHHHCSEEEEEECGGGTGGGTCCCSSSGGGEETTEEH
T ss_pred HHHHHHHHHhCCcEEEEECcccchhhCCCccccccchhhhCCh
Confidence 5778899999999999999999999999999999999998754
No 19
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=99.08 E-value=3.1e-11 Score=119.31 Aligned_cols=67 Identities=28% Similarity=0.511 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhccceeeecCCCcccCCCCCCcCCCCccccccccCccccccccccCCCCHHHHHHHH
Q psy10043 101 AKCKQLAEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYK 168 (504)
Q Consensus 101 eki~~LaelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~ 168 (504)
+.++++++++++++++||+|||||||+||||||||++|+|+++... .+.........|...+.+.+.
T Consensus 3 ~~i~~l~~~l~~a~~ivv~tGAGiS~~SGIPdfR~~~Glw~~~~~~-~~~~~~~f~~~p~~~~~f~~~ 69 (253)
T 1ma3_A 3 DEIRKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPE-EVASISGFKRNPRAFWEFSME 69 (253)
T ss_dssp HHHHHHHHHHHHCSSEEEEECGGGSCC----------CCSCSSCHH-HHTBHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEEEEchhhhHhhCCCCcCCCCcccccCChh-heecHHHHhcCHHHHHHHHHH
Confidence 4578899999999999999999999999999999999999975321 122222334456555555444
No 20
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=99.05 E-value=6.8e-11 Score=119.04 Aligned_cols=45 Identities=31% Similarity=0.630 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHh--ccceeeecCCCcccCCCCCCcCCCC-cccccccc
Q psy10043 101 AKCKQLAEAIQN--AKHVVVYTGAGISTAAKIPDYRGTK-GIWTLLQQ 145 (504)
Q Consensus 101 eki~~LaelI~~--Ak~iVV~TGAGISt~SGIPDFRg~~-Glw~~~~~ 145 (504)
..+..+++++++ +++|||+|||||||+||||||||++ |+|+++.+
T Consensus 6 ~~i~~l~~~i~~~~a~~ivvltGAGiSt~SGIPdfR~~~~Glw~~~~~ 53 (289)
T 1q1a_A 6 MSVRKIAAHMKSNPNAKVIFMVGAGISTSCGIPDFRSPGTGLYHNLAR 53 (289)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEECGGGGGGGTCCCSSSTTTSGGGSCGG
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCceeHhhCCCCcCCCCCcccccccc
Confidence 457889999999 9999999999999999999999995 99998754
No 21
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=99.05 E-value=4.9e-11 Score=123.38 Aligned_cols=43 Identities=30% Similarity=0.714 Sum_probs=39.9
Q ss_pred HHHHHHHHHhccceeeecCCCcccCCCCCCcCCCCcccccccc
Q psy10043 103 CKQLAEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQ 145 (504)
Q Consensus 103 i~~LaelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~ 145 (504)
+..++++++++++|||+|||||||+||||||||++|+|+++++
T Consensus 36 i~~l~~~l~~a~~IvvlTGAGISt~SGIPdFR~~~Glw~~~~~ 78 (354)
T 2hjh_A 36 IDHFIQKLHTARKILVLTGAGVSTSLGIPDFRSSEGFYSKIKH 78 (354)
T ss_dssp HHHHHHHHHHCSSEEEEECGGGGGGGTCCCSSSTTSHHHHTGG
T ss_pred HHHHHHHHHhCCcEEEEECchhhHhhCCCcccCcchHHHHHHh
Confidence 5778899999999999999999999999999999999998654
No 22
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=99.03 E-value=5e-11 Score=119.77 Aligned_cols=44 Identities=45% Similarity=0.703 Sum_probs=39.4
Q ss_pred HHHHHHHHHh--ccceeeecCCCcccCCCCCCcCCCC-ccccccccC
Q psy10043 103 CKQLAEAIQN--AKHVVVYTGAGISTAAKIPDYRGTK-GIWTLLQQG 146 (504)
Q Consensus 103 i~~LaelI~~--Ak~iVV~TGAGISt~SGIPDFRg~~-Glw~~~~~~ 146 (504)
++.+++++++ +++|||+|||||||+||||||||++ |+|++++++
T Consensus 11 l~~la~~i~~~~a~~IvvlTGAGISteSGIPdFR~~~~Glw~~~~~~ 57 (285)
T 3glr_A 11 LQDVAELIRARACQRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQY 57 (285)
T ss_dssp HHHHHHHHHTTSCCCEEEEECGGGTGGGTCCCTTSSSSHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCeEEEEeCCccchhhCCCCcccCCCccccchhcc
Confidence 5778899997 8999999999999999999999994 999987653
No 23
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=99.03 E-value=2.6e-11 Score=122.15 Aligned_cols=68 Identities=28% Similarity=0.453 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhccceeeecCCCcccCCCCCCcCC-CCccccccccCccccccccccCCCCHHHHHHHHH
Q psy10043 101 AKCKQLAEAIQNAKHVVVYTGAGISTAAKIPDYRG-TKGIWTLLQQGKDIGNHDLSLAEPTLTHMALYKL 169 (504)
Q Consensus 101 eki~~LaelI~~Ak~iVV~TGAGISt~SGIPDFRg-~~Glw~~~~~~~~~~~~~~~~a~Pn~~H~~La~L 169 (504)
..+++++++++++++|||+|||||||+|||||||+ ++|+|+++.... +....+....|...+.+...+
T Consensus 33 ~~i~~l~~~i~~a~~ivvlTGAGiSt~SGIPdFR~~~~Glw~~~~p~~-~~~~~~f~~~p~~~w~~~~~~ 101 (290)
T 3u31_A 33 ITLEELAKIIKKCKHVVALTGSGTSAESNIPSFRGSSNSIWSKYDPRI-YGTIWGFWKYPEKIWEVIRDI 101 (290)
T ss_dssp ECHHHHHHHHHTCSSEEEEECGGGTGGGTCCSCTTCTTSGGGGSCHHH-HTBHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccccccCCccccccccchhhcCCHHH-hhCHHhhhhCHHHHHHHHHHH
Confidence 45678999999999999999999999999999999 699999765421 112222234565556555544
No 24
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=99.02 E-value=7.3e-11 Score=116.40 Aligned_cols=41 Identities=37% Similarity=0.776 Sum_probs=37.9
Q ss_pred HHHHHHHHhccceeeecCCCcccCCCCCCcCCCCccccccc
Q psy10043 104 KQLAEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQ 144 (504)
Q Consensus 104 ~~LaelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~ 144 (504)
+++++++++++++||+|||||||+||||||||++|+|+++.
T Consensus 3 ~~l~~~i~~a~~ivvltGAGiS~~SGIPdfR~~~Glw~~~~ 43 (249)
T 1m2k_A 3 EKLLKTIAESKYLVALTGAGVSAESGIPTFRGKDGLWNRYR 43 (249)
T ss_dssp HHHHHHHHTCSSEEEEECGGGGGGGTCCCSSSTTCHHHHSC
T ss_pred HHHHHHHHhCCCEEEEECchhhhhhCCCCccCCCcCccCCC
Confidence 46788999999999999999999999999999999999753
No 25
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=99.01 E-value=8.9e-11 Score=121.62 Aligned_cols=53 Identities=26% Similarity=0.500 Sum_probs=33.3
Q ss_pred CCChHHHHHHHHHHHHHHHh--ccceeeecCCCcccCCCCCCcCCCC-cccccccc
Q psy10043 93 EDKPEILAAKCKQLAEAIQN--AKHVVVYTGAGISTAAKIPDYRGTK-GIWTLLQQ 145 (504)
Q Consensus 93 eDdPe~l~eki~~LaelI~~--Ak~iVV~TGAGISt~SGIPDFRg~~-Glw~~~~~ 145 (504)
...+..+...+..+++++++ +++|||+|||||||+||||||||++ |+|+.+.+
T Consensus 6 ~~~~~~~~~~i~~l~~~i~~~~a~~IVvlTGAGISteSGIPdFR~~~~Glw~~~~~ 61 (361)
T 1q14_A 6 SVSTASTEMSVRKIAAHMKSNPNAKVIFMVGAGISTSCGIPDFRSPGTGLYHNLAR 61 (361)
T ss_dssp CCSSCCHHHHHHHHHHHHHTSTTCCEEEEECGGGTGGGC--------------CCC
T ss_pred CCCchhHHHHHHHHHHHHHhccCCcEEEEeCcccchhcCCcccccCcchhhhcccc
Confidence 34444556678899999999 9999999999999999999999995 99998764
No 26
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=98.97 E-value=1.4e-10 Score=123.42 Aligned_cols=43 Identities=30% Similarity=0.714 Sum_probs=39.9
Q ss_pred HHHHHHHHHhccceeeecCCCcccCCCCCCcCCCCcccccccc
Q psy10043 103 CKQLAEAIQNAKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQQ 145 (504)
Q Consensus 103 i~~LaelI~~Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~~ 145 (504)
+..++++++++++|||+|||||||+||||||||++|+|+++.+
T Consensus 174 i~~l~~~L~~ak~IVVLTGAGISTeSGIPDFRs~~GLw~~~~~ 216 (492)
T 4iao_A 174 IDHFIQKLHTARKILVLTGAGVSTSLGIPDFRSSEGFYSKIKH 216 (492)
T ss_dssp HHHHHHHHHHCSCEEEEECGGGGGGGTCCCSSSTTSHHHHHHT
T ss_pred HHHHHHHHHhCCcEEEEeCcccccccCCccccCchHHHHhhhh
Confidence 5778899999999999999999999999999999999998754
No 27
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=98.96 E-value=2.4e-10 Score=116.83 Aligned_cols=43 Identities=37% Similarity=0.687 Sum_probs=38.9
Q ss_pred HHHHHHHHHh--ccceeeecCCCcccCCCCCCcCCC-Ccccccccc
Q psy10043 103 CKQLAEAIQN--AKHVVVYTGAGISTAAKIPDYRGT-KGIWTLLQQ 145 (504)
Q Consensus 103 i~~LaelI~~--Ak~iVV~TGAGISt~SGIPDFRg~-~Glw~~~~~ 145 (504)
+..+++++++ +++|||+|||||||+||||||||+ +|+|+++++
T Consensus 31 l~~l~~~i~~~~a~~ivvltGAGiSt~SGIPdfR~~~~Glw~~~~~ 76 (323)
T 1j8f_A 31 LEGVARYMQSERCRRVICLVGAGISTSAGIPDFRSPSTGLYDNLEK 76 (323)
T ss_dssp HHHHHHHHHSTTCCCEEEEECGGGTGGGTCCCTTCSCSTTSTTTTT
T ss_pred HHHHHHHHHhcCCCcEEEEecchhhHhhCCCcccCCCccHHHHhhh
Confidence 5678888886 899999999999999999999999 599998764
No 28
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=98.82 E-value=6e-10 Score=108.95 Aligned_cols=32 Identities=38% Similarity=0.707 Sum_probs=29.8
Q ss_pred ccceeeecCCCcccCCCCCCcCCCCccccccc
Q psy10043 113 AKHVVVYTGAGISTAAKIPDYRGTKGIWTLLQ 144 (504)
Q Consensus 113 Ak~iVV~TGAGISt~SGIPDFRg~~Glw~~~~ 144 (504)
+++|||+|||||||+||||||||++|+|+++.
T Consensus 1 a~~ivvltGAGiS~~SGIPdfR~~~Glw~~~~ 32 (235)
T 1s5p_A 1 KPRVLVLTGAGISAESGIRTFRAADGLWEEHR 32 (235)
T ss_dssp CCCEEEEECTHHHHTTTCCCCCSSSCEETTEE
T ss_pred CCcEEEEechhhhhhhCCCCCCCCCCCccCCC
Confidence 57999999999999999999999999999764
No 29
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=74.48 E-value=5.7 Score=42.44 Aligned_cols=67 Identities=10% Similarity=0.266 Sum_probs=43.5
Q ss_pred HHHHHHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCC
Q psy10043 266 GANKNADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKK 345 (504)
Q Consensus 266 ~a~~~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~ 345 (504)
.+.+.+.+||++|++||++... .+ . + ...++|.|+..+...+.
T Consensus 258 ~~~~~~~~aDlvl~iG~~~~~~---~~---~--~--~~~~~i~id~d~~~~~~--------------------------- 300 (549)
T 3eya_A 258 SGFHTMMNADTLVLLGTQFPYR---AF---Y--P--TDAKIIQIDINPASIGA--------------------------- 300 (549)
T ss_dssp HHHHHHHHCSEEEEESCCCCCG---GG---S--C--SSSEEEEEESCGGGTTS---------------------------
T ss_pred HHHHHHHhCCEEEEECCCCCcc---cc---C--C--CCCeEEEEeCCHHHhCC---------------------------
Confidence 3456678999999999987432 11 1 1 23467677665432110
Q ss_pred CCCceEEeccccCCCCCcccEEEecCHHHHHHHHHHHcC
Q psy10043 346 ERPKLCIVNLQWTPKDDQATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 346 ~~~~l~ivN~q~t~~d~~adl~i~g~cD~v~~~L~~~Lg 384 (504)
....++.|.||..++++.|.+.|.
T Consensus 301 ---------------~~~~~~~i~~d~~~~l~~L~~~l~ 324 (549)
T 3eya_A 301 ---------------HSKVDMALVGDIKSTLRALLPLVE 324 (549)
T ss_dssp ---------------SSCCSEEEECCHHHHHHHHGGGSC
T ss_pred ---------------CCCCCeEEEeCHHHHHHHHHHhcc
Confidence 112467889999999999988775
No 30
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=73.71 E-value=7.9 Score=41.93 Aligned_cols=71 Identities=14% Similarity=0.199 Sum_probs=45.7
Q ss_pred HHHHHHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCC
Q psy10043 266 GANKNADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKK 345 (504)
Q Consensus 266 ~a~~~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~ 345 (504)
.+.+.+.+||++|++||.+... .+. ... ....++|.|+.++...+
T Consensus 269 ~~~~~l~~aDlvl~iG~~~~~~---~~~---~~~-~~~~~~i~id~d~~~~~---------------------------- 313 (603)
T 4feg_A 269 PANEALAQADVVLFVGNNYPFA---EVS---KAF-KNTRYFLQIDIDPAKLG---------------------------- 313 (603)
T ss_dssp HHHHHHHHCSEEEEESCCCTTT---TTT---TTT-TTCSEEEEEESCGGGTT----------------------------
T ss_pred HHHHHHHhCCEEEEECCCCCcc---ccc---ccC-CCCCeEEEEeCCHHHhC----------------------------
Confidence 3556778999999999997631 111 011 12356766766543211
Q ss_pred CCCceEEeccccCCCCCcccEEEecCHHHHHHHHHHHcCC
Q psy10043 346 ERPKLCIVNLQWTPKDDQATLKINGKCDVVFKQLMAHLNL 385 (504)
Q Consensus 346 ~~~~l~ivN~q~t~~d~~adl~i~g~cD~v~~~L~~~Lg~ 385 (504)
+....++.|.||+..+++.|.+.+..
T Consensus 314 --------------~~~~~~~~i~~D~~~~l~~L~~~l~~ 339 (603)
T 4feg_A 314 --------------KRHKTDIAVLADAQKTLAAILAQVSE 339 (603)
T ss_dssp --------------SSSCCSEEEESCHHHHHHHHHHTCCC
T ss_pred --------------CccCCCEEEEeCHHHHHHHHHHhhhc
Confidence 11235688999999999999988763
No 31
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=68.21 E-value=13 Score=39.80 Aligned_cols=70 Identities=14% Similarity=0.156 Sum_probs=44.8
Q ss_pred HHHHHhcCCeeEEEccc-ccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCC
Q psy10043 267 ANKNADRADLILCVGSS-LKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKK 345 (504)
Q Consensus 267 a~~~~~~aDllLVvGTS-L~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~ 345 (504)
+.+.+++||++|++|+. +.-.. ...|. + ....+++.|+.++...+
T Consensus 281 ~~~~l~~aDlvl~iG~~~~~~~~--~~~~~---~-~~~~~~i~id~d~~~~~---------------------------- 326 (573)
T 2iht_A 281 LQTMFAPVDLVLTVGYDYAEDLR--PSMWQ---K-GIEKKTVRISPTVNPIP---------------------------- 326 (573)
T ss_dssp HHHHHTTCCEEEEETCCGGGCCC--HHHHC---C-SSCCEEEEEESSCCSCT----------------------------
T ss_pred HHHHHhhCCEEEEECCCcccccc--ccccC---C-CCCCeEEEEeCCHHHhC----------------------------
Confidence 45678899999999998 64321 11111 1 12346767766543211
Q ss_pred CCCceEEeccccCCCCCcccEEEecCHHHHHHHHHHHcC
Q psy10043 346 ERPKLCIVNLQWTPKDDQATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 346 ~~~~l~ivN~q~t~~d~~adl~i~g~cD~v~~~L~~~Lg 384 (504)
+....++.|.||+.++++.|.+.|.
T Consensus 327 --------------~~~~~~~~i~~d~~~~l~~L~~~l~ 351 (573)
T 2iht_A 327 --------------RVYRPDVDVVTDVLAFVEHFETATA 351 (573)
T ss_dssp --------------TTCCCSEEEESCHHHHHHHHHHHTT
T ss_pred --------------CCcCCCeeEeCCHHHHHHHHHHhcc
Confidence 1122568999999999999999875
No 32
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=67.29 E-value=13 Score=40.16 Aligned_cols=21 Identities=19% Similarity=0.306 Sum_probs=18.7
Q ss_pred ccEEEecCHHHHHHHHHHHcC
Q psy10043 364 ATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 364 adl~i~g~cD~v~~~L~~~Lg 384 (504)
.++.|.||+.++++.|.+.|.
T Consensus 314 ~~~~i~~d~~~~l~~L~~~l~ 334 (589)
T 2pgn_A 314 PLLSVVADAKTFMEQLIEVLP 334 (589)
T ss_dssp CSEEEECCHHHHHHHHHHHGG
T ss_pred CCEEEEeCHHHHHHHHHHHhh
Confidence 578999999999999998874
No 33
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=67.04 E-value=13 Score=39.70 Aligned_cols=21 Identities=10% Similarity=0.317 Sum_probs=18.4
Q ss_pred ccEEEecCHHHHHHHHHHHcC
Q psy10043 364 ATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 364 adl~i~g~cD~v~~~L~~~Lg 384 (504)
.++.|.||+.++++.|.+.|.
T Consensus 316 ~~~~i~~d~~~~l~~L~~~l~ 336 (566)
T 1ozh_A 316 PDVELVGDIAGTLNKLAQNID 336 (566)
T ss_dssp CSEEEESCHHHHHHHHHHTCC
T ss_pred CCEEEEeCHHHHHHHHHHhcc
Confidence 578899999999999998774
No 34
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=66.72 E-value=13 Score=39.73 Aligned_cols=21 Identities=14% Similarity=0.145 Sum_probs=18.3
Q ss_pred ccEEEecCHHHHHHHHHHHcC
Q psy10043 364 ATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 364 adl~i~g~cD~v~~~L~~~Lg 384 (504)
.++.|.|+..+++++|.+.|.
T Consensus 318 ~~~~i~~d~~~~l~~L~~~l~ 338 (568)
T 2c31_A 318 IAAPVVGDIKSAVSLLRKALK 338 (568)
T ss_dssp CSEEEESCHHHHHHHHHHHHT
T ss_pred CCceeeCCHHHHHHHHHHhhh
Confidence 568899999999999998874
No 35
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=65.83 E-value=12 Score=40.38 Aligned_cols=72 Identities=18% Similarity=0.285 Sum_probs=44.4
Q ss_pred HHHHHHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCC
Q psy10043 266 GANKNADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKK 345 (504)
Q Consensus 266 ~a~~~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~ 345 (504)
.+...+.+||++|++||.+.-.. .... ... ....+++.|+.++...+
T Consensus 271 ~~~~~l~~aDlvl~iG~~~~~~~-~~~~---~~~-~~~~~~i~id~d~~~~~---------------------------- 317 (590)
T 1ybh_A 271 YANYAVEHSDLLLAFGVRFDDRV-TGKL---EAF-ASRAKIVHIDIDSAEIG---------------------------- 317 (590)
T ss_dssp HHHHHHHHCSEEEEESCCCCHHH-HSSG---GGT-TTTSEEEEEESCTTTTT----------------------------
T ss_pred HHHHHHHhCCEEEEEcCCCCccc-cCcc---ccc-CCCCeEEEEECCHHHhC----------------------------
Confidence 45567789999999999874310 0000 001 11346666666543211
Q ss_pred CCCceEEeccccCCCCCcccEEEecCHHHHHHHHHHHcC
Q psy10043 346 ERPKLCIVNLQWTPKDDQATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 346 ~~~~l~ivN~q~t~~d~~adl~i~g~cD~v~~~L~~~Lg 384 (504)
+....++.|.||+.+++++|.+.|.
T Consensus 318 --------------~~~~~~~~i~~d~~~~l~~L~~~l~ 342 (590)
T 1ybh_A 318 --------------KNKTPHVSVCGDVKLALQGMNKVLE 342 (590)
T ss_dssp --------------SSSCCSEEEESCHHHHHHHHHHHHH
T ss_pred --------------CCcCCCeEEecCHHHHHHHHHHhhh
Confidence 1123578999999999999988763
No 36
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=65.75 E-value=13 Score=39.95 Aligned_cols=70 Identities=17% Similarity=0.252 Sum_probs=44.6
Q ss_pred HHHHHHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeecCCCcchhccccccCCCCCCC
Q psy10043 266 GANKNADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKINGKYPVLRKYGWLWGLDRPKK 345 (504)
Q Consensus 266 ~a~~~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~~~~p~~~~~~~~~~~~~~~~ 345 (504)
.+.+.+++||++|++|+.+.....+.-.+ ...+++.|+.++...+
T Consensus 262 ~~~~~l~~aDlvl~iG~~~~~~~~~~~~~-------~~~~~i~id~d~~~~~---------------------------- 306 (590)
T 1v5e_A 262 PANETILEADTVLFAGSNFPFSEVEGTFR-------NVDNFIQIDIDPAMLG---------------------------- 306 (590)
T ss_dssp HHHHHHHHCSEEEEESCCCTTTTTTTTTT-------TCSEEEEEESCGGGTT----------------------------
T ss_pred HHHHHHHhCCEEEEECCCCcchhccccCC-------CCCeEEEEeCCHHHHC----------------------------
Confidence 45567889999999999885431000000 1346666665542211
Q ss_pred CCCceEEeccccCCCCCcccEEEecCHHHHHHHHHHHcC
Q psy10043 346 ERPKLCIVNLQWTPKDDQATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 346 ~~~~l~ivN~q~t~~d~~adl~i~g~cD~v~~~L~~~Lg 384 (504)
+....++.+.|++.++++.|.+.|.
T Consensus 307 --------------~~~~~~~~i~gd~~~~l~~L~~~l~ 331 (590)
T 1v5e_A 307 --------------KRHHADVAILGDAALAIDEILNKVD 331 (590)
T ss_dssp --------------SSSCCSEEEESCHHHHHHHHHHHSC
T ss_pred --------------CCcCCCeEEEcCHHHHHHHHHHhhc
Confidence 1123568899999999999999885
No 37
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=62.88 E-value=17 Score=38.66 Aligned_cols=21 Identities=14% Similarity=0.333 Sum_probs=17.7
Q ss_pred ccEEEecCHHHHHHHHHHHcC
Q psy10043 364 ATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 364 adl~i~g~cD~v~~~L~~~Lg 384 (504)
.++.|.||..+++++|.+.|.
T Consensus 314 ~~~~i~~d~~~~l~~L~~~l~ 334 (564)
T 2q28_A 314 IAVPVVGDIASSMQGMLAELK 334 (564)
T ss_dssp CSEEEESCHHHHHHHHHHHHH
T ss_pred CCeEEEcCHHHHHHHHHHHhh
Confidence 568899999999999988763
No 38
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=62.41 E-value=11 Score=39.95 Aligned_cols=21 Identities=10% Similarity=-0.018 Sum_probs=18.5
Q ss_pred ccEEEecCHHHHHHHHHHHcC
Q psy10043 364 ATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 364 adl~i~g~cD~v~~~L~~~Lg 384 (504)
.++.|.|+..++++.|.+.+.
T Consensus 310 ~~~~i~~d~~~~l~~L~~~~~ 330 (528)
T 1q6z_A 310 MGDAIVADIGAMASALANLVE 330 (528)
T ss_dssp SSEEEESCHHHHHHHHHHHSC
T ss_pred CCeeEeCCHHHHHHHHHHHhh
Confidence 568899999999999999875
No 39
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=61.82 E-value=12 Score=40.06 Aligned_cols=21 Identities=10% Similarity=0.078 Sum_probs=18.4
Q ss_pred ccEEEecCHHHHHHHHHHHcC
Q psy10043 364 ATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 364 adl~i~g~cD~v~~~L~~~Lg 384 (504)
.++.|.|++.++++.|.+.+.
T Consensus 333 ~~~~i~~d~~~~l~~L~~~l~ 353 (578)
T 3lq1_A 333 VTDMIHCDERFLLDIMQQNMP 353 (578)
T ss_dssp CSEEECSCHHHHHHHHHHHSC
T ss_pred ceEEEEeCHHHHHHHHHhhcc
Confidence 568899999999999998875
No 40
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=60.61 E-value=14 Score=39.35 Aligned_cols=21 Identities=14% Similarity=0.082 Sum_probs=18.7
Q ss_pred ccEEEecCHHHHHHHHHHHcC
Q psy10043 364 ATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 364 adl~i~g~cD~v~~~L~~~Lg 384 (504)
.++.|.||..++++.|.+.|.
T Consensus 314 ~~~~i~~d~~~~l~~L~~~l~ 334 (563)
T 2uz1_A 314 IALGIVADVGGTIEALAQATA 334 (563)
T ss_dssp CSEEECSCHHHHHHHHHHHHT
T ss_pred CCeEEEcCHHHHHHHHHHhhh
Confidence 578999999999999998874
No 41
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=56.46 E-value=13 Score=40.89 Aligned_cols=21 Identities=10% Similarity=0.371 Sum_probs=18.4
Q ss_pred ccEEEecCHHHHHHHHHHHcC
Q psy10043 364 ATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 364 adl~i~g~cD~v~~~L~~~Lg 384 (504)
.++.|.|++..+++.|.+.|.
T Consensus 409 ~~~~i~gD~~~~l~~L~~~l~ 429 (677)
T 1t9b_A 409 TQIAVEGDATTNLGKMMSKIF 429 (677)
T ss_dssp CSEEEESCHHHHHHHHHTTSC
T ss_pred CCEEEeCCHHHHHHHHHHHhh
Confidence 578899999999999988774
No 42
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=47.92 E-value=22 Score=37.87 Aligned_cols=20 Identities=30% Similarity=0.493 Sum_probs=16.8
Q ss_pred HHHHHHhcCCeeEEEccccc
Q psy10043 266 GANKNADRADLILCVGSSLK 285 (504)
Q Consensus 266 ~a~~~~~~aDllLVvGTSL~ 285 (504)
.+.+.+++||++|++||.+.
T Consensus 271 ~~~~~~~~aDlvl~iG~~~~ 290 (556)
T 3hww_A 271 KATSELQQAQIVVQLGSSLT 290 (556)
T ss_dssp HHHHHHTTCSEEEEESBCCC
T ss_pred hhhhcccCCCEEEEcCCCcc
Confidence 45567889999999999984
No 43
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=47.36 E-value=27 Score=37.63 Aligned_cols=21 Identities=24% Similarity=0.320 Sum_probs=18.2
Q ss_pred ccEEEecCHHHHHHHHHHHcC
Q psy10043 364 ATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 364 adl~i~g~cD~v~~~L~~~Lg 384 (504)
.++.|.|+..++++.|.+.|.
T Consensus 353 ~~~~i~~d~~~~l~~L~~~l~ 373 (604)
T 2x7j_A 353 SAHMIHCNASVFAEEIMAGLT 373 (604)
T ss_dssp CSEEECSCHHHHHHHHHHTSC
T ss_pred ceEEEEcCHHHHHHHHHHhhc
Confidence 568899999999999998774
No 44
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=45.03 E-value=20 Score=38.68 Aligned_cols=21 Identities=14% Similarity=0.172 Sum_probs=17.7
Q ss_pred ccEEEecCHHHHHHHHHHHcC
Q psy10043 364 ATLKINGKCDVVFKQLMAHLN 384 (504)
Q Consensus 364 adl~i~g~cD~v~~~L~~~Lg 384 (504)
.++.|.||...+++.|.+.|.
T Consensus 337 ~~~~i~~D~~~~l~~L~~~l~ 357 (616)
T 2pan_A 337 PDLGIVSDAKAALTLLVEVAQ 357 (616)
T ss_dssp CSSCEECCHHHHHHHHHHHHH
T ss_pred CCeEEEcCHHHHHHHHHHHhh
Confidence 467889999999999988763
No 45
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=37.96 E-value=16 Score=33.17 Aligned_cols=57 Identities=19% Similarity=0.250 Sum_probs=36.4
Q ss_pred CCchhHHHHHHHHHhhhhccccccccccCChHHHHHHHHHHHHHHHhCCcEEEEccCCcccc
Q psy10043 3 LDSNDSIGVLKERLKKINKVKSRNEELEDEPEVLAAKCKKLAEAIQNAKHVVVYTGAGISTA 64 (504)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~l~~~l~~~~~ivv~TGAGiS~~ 64 (504)
|+..++...+++-............+..| + +.+++++++|.++++-|++.|.|-|..
T Consensus 2 m~~~~~~~i~~~~~~~~~~~l~~t~~~l~-~----~~i~~~~~~i~~a~~~I~i~G~G~S~~ 58 (201)
T 3fxa_A 2 MDKQAILDNIHQTWQEEANAISRLPEVTS-E----EALVKTVEKIAECTGKIVVAGCGTSGV 58 (201)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTHHHHSC-H----HHHHHHHHHHHHCSSCEEEECCTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcC-H----HHHHHHHHHHHhcCCcEEEEEecHHHH
Confidence 34445556666665555544444444554 2 457789999999964567889998753
No 46
>2vpz_A Thiosulfate reductase; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_A* 2vpw_A* 2vpy_A*
Probab=36.13 E-value=13 Score=41.39 Aligned_cols=55 Identities=15% Similarity=0.157 Sum_probs=38.8
Q ss_pred HhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeec
Q psy10043 271 ADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKIN 325 (504)
Q Consensus 271 ~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~ 325 (504)
+.+||++|++|+-......-.....+..+..++.++|+|++..+.....|+..+.
T Consensus 197 ~~~ad~il~~G~n~~~~~p~~~~~~~~~a~~~G~klividPr~t~ta~~Ad~~l~ 251 (765)
T 2vpz_A 197 WENARYIVLIGHHIGEDTHNTQLQDFALALKNGAKVVVVDPRFSTAAAKAHRWLP 251 (765)
T ss_dssp GGGCSEEEEESCCBTTBCCHHHHHHHHHHHHTTCEEEEECSBCCTTGGGCSEEEC
T ss_pred cccCCEEEEEeCChhhcCChHHHHHHHHHHHCCCEEEEECCCCCcchhhCCeEeC
Confidence 5799999999998766421011112233556789999999999988888887654
No 47
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=30.06 E-value=60 Score=32.43 Aligned_cols=22 Identities=23% Similarity=0.095 Sum_probs=20.0
Q ss_pred CcccEEEecCHHHHHHHHHHHc
Q psy10043 362 DQATLKINGKCDVVFKQLMAHL 383 (504)
Q Consensus 362 ~~adl~i~g~cD~v~~~L~~~L 383 (504)
..+|+-|-||.=+++++|.++|
T Consensus 297 ~~ADygiVgDl~~vvP~L~~~l 318 (320)
T 1o97_D 297 TIAKYGIVADIFDIEEELKAQL 318 (320)
T ss_dssp GTCSEEECSCHHHHHHHHHHHC
T ss_pred cccCeEEeeeHHHHHHHHHHHH
Confidence 4589999999999999999987
No 48
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=30.01 E-value=18 Score=32.25 Aligned_cols=28 Identities=21% Similarity=0.409 Sum_probs=17.7
Q ss_pred ceeeccCCCCCcccccccchhhhhhhhhccCCCCC-CCCCCcc
Q psy10043 205 SVEVCAHCDPVKYYWRVFDVTEHTARYAHQTARKC-SCGEPLL 246 (504)
Q Consensus 205 ~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~P~C-~Cgg~Lr 246 (504)
+..+|..|++.++ .. .....| .||+.++
T Consensus 131 ~~y~C~~Cg~~~~------~~--------~~~~~Cp~CG~~~~ 159 (165)
T 2lcq_A 131 WRYVCIGCGRKFS------TL--------PPGGVCPDCGSKVK 159 (165)
T ss_dssp CCEEESSSCCEES------SC--------CGGGBCTTTCCBEE
T ss_pred EEEECCCCCCccc------CC--------CCCCcCCCCCCcce
Confidence 3568999997421 10 113489 9998764
No 49
>1h0h_A Formate dehydrogenase (large subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: b.52.2.2 c.81.1.1
Probab=26.73 E-value=21 Score=41.12 Aligned_cols=54 Identities=22% Similarity=0.363 Sum_probs=37.9
Q ss_pred HHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceee
Q psy10043 270 NADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKI 324 (504)
Q Consensus 270 ~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i 324 (504)
.+.+||+||++|+.........+.+ +..+..++.++|+|++..+.....|++.|
T Consensus 181 D~~~ad~il~~G~N~~~~~p~~~~~-~~~a~~~G~klivIDPr~t~ta~~AD~~l 234 (977)
T 1h0h_A 181 DLKNSDVILMMGSNPAENHPISFKW-VMRAKDKGATLIHVDPRYTRTSTKCDLYA 234 (977)
T ss_dssp GGGGCSEEEEESCCHHHHSTTHHHH-HHHHHHTTCEEEEECSSCCTTGGGCSEEE
T ss_pred HHhhCCEEEEECCChHHhCcHHHHH-HHHHHHCCCeEEEECCCCCchhHHhCeee
Confidence 3678999999999876542111111 22345678999999999998888888663
No 50
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=26.46 E-value=82 Score=35.39 Aligned_cols=45 Identities=18% Similarity=0.358 Sum_probs=24.7
Q ss_pred ccCCCCC-CCCCCccccEEEecCCCCCCChhhHHHHHHHHhcCCeeEEEc
Q psy10043 233 HQTARKC-SCGEPLLDTIIHFGEKGVLLWPLNWDGANKNADRADLILCVG 281 (504)
Q Consensus 233 ~~~~P~C-~Cgg~LrP~IV~FGE~~~~~~~~~~~~a~~~~~~aDllLVvG 281 (504)
|...-.| .|| |.+-+++..........+..|.+.+++-.++.+=|
T Consensus 175 hAqp~aC~~CG----P~l~l~~~~~~~~~~~~i~~a~~~l~~G~iva~kg 220 (772)
T 4g9i_A 175 HAEPTACPVCG----PSYRLYTSDGQEIYGDPLRKAAELIDKGYIVAIKG 220 (772)
T ss_dssp TCTTCCCTTTS----CCEEEESSSCBCCTTHHHHHHHHHHTTSCCEEECC
T ss_pred cCCCCCCccCC----ceEEEEcCCCCeechHHHHHHHHHHHcCCEEEEec
Confidence 4445567 999 55555544332223345667777776555544433
No 51
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=25.89 E-value=11 Score=41.69 Aligned_cols=54 Identities=17% Similarity=0.163 Sum_probs=36.7
Q ss_pred HhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceee
Q psy10043 271 ADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKI 324 (504)
Q Consensus 271 ~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i 324 (504)
+.+||++|++|+.......-.....+..+..++.++|+|++..+.....|+..+
T Consensus 158 ~~~ad~il~~G~n~~~~~p~~~~~~l~~a~~~G~klividPr~t~ta~~Ad~~l 211 (727)
T 2e7z_A 158 FADSNCLLFIGKNLSNHNWVSQFNDLKAALKRGCKLIVLDPRRTKVAEMADIWL 211 (727)
T ss_dssp TTTCSEEEEESCCCBTTBSHHHHHHHHHHHHHTCEEEEECSSCCHHHHHCSEEE
T ss_pred cccCCEEEEECCChhhcCCHHHHHHHHHHHHCCCeEEEECCCCCcchhhcceee
Confidence 568999999999876642101111223345678899999999887777777665
No 52
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=24.76 E-value=49 Score=29.52 Aligned_cols=23 Identities=22% Similarity=0.161 Sum_probs=20.8
Q ss_pred HHHHHHHHHhCCcEEEEccCCcc
Q psy10043 40 CKKLAEAIQNAKHVVVYTGAGIS 62 (504)
Q Consensus 40 ~~~l~~~l~~~~~ivv~TGAGiS 62 (504)
+++++++|++|++.+++.|.|+.
T Consensus 24 v~~aa~~L~~AkrPvil~G~g~~ 46 (170)
T 3cf4_G 24 PEMAAKIISKAKRPLLMVGTLAL 46 (170)
T ss_dssp HHHHHHHHHHCSSEEEEECSTTC
T ss_pred HHHHHHHHHcCCCCEEEECCCcc
Confidence 77899999999999999999864
No 53
>2ivf_A Ethylbenzene dehydrogenase alpha-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=22.54 E-value=23 Score=40.70 Aligned_cols=55 Identities=16% Similarity=0.203 Sum_probs=39.4
Q ss_pred HHhcCCeeEEEcccccccccccccccCCCCccCCCeEEEEcCCCCCCCcccceeec
Q psy10043 270 NADRADLILCVGSSLKVLRKYGWLWGLDRPKKERPKLCIVNLQWTPKDDQATLKIN 325 (504)
Q Consensus 270 ~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~ 325 (504)
++.+||+||++|+....... +....+..++.++.++|+|++..+.....|++.+.
T Consensus 243 D~~nad~Il~~G~N~~~~~p-~~~~~~~~ar~~GakvivVDPr~t~ta~~AD~wl~ 297 (976)
T 2ivf_A 243 NLLDAELIFMTCSNWSYTYP-SSYHFLSEARYKGAEVVVIAPDFNPTTPAADLHVP 297 (976)
T ss_dssp GGGGCSEEEEESCCHHHHCT-TTHHHHHHHHHHTCEEEEECSSCCTTGGGCSEEEC
T ss_pred hHhhCcEEEEeCCChhHccc-HHHHHHHHHHHcCCEEEEECCCCCcchhhcCeEec
Confidence 36789999999998765421 12222334566789999999999888788887653
No 54
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=21.50 E-value=69 Score=28.11 Aligned_cols=53 Identities=21% Similarity=0.088 Sum_probs=32.9
Q ss_pred hHHHHHHHHHhhhhccccccccccCChHHHHHHHHHHHHHHHhCCcEEEEccCCccccc
Q psy10043 7 DSIGVLKERLKKINKVKSRNEELEDEPEVLAAKCKKLAEAIQNAKHVVVYTGAGISTAA 65 (504)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~l~~~l~~~~~ivv~TGAGiS~~S 65 (504)
+..+.+++-............+..+ ..++++++++.++++-|++.|.|-|...
T Consensus 11 ~~~~~~~~~~~~~~~~l~~t~~~~~------~~i~~~~~~i~~a~~~I~i~G~G~S~~~ 63 (183)
T 2xhz_A 11 DFQQAGKEVLAIERECLAELDQYIN------QNFTLACEKMFWCKGKVVVMGMGASGHI 63 (183)
T ss_dssp CHHHHHHHHHHHHHHHHTTGGGTSS------HHHHHHHHHHHTCSSCEEEEECHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHhCCCeEEEEeecHHHHH
Confidence 4444455555544444444444454 1577889999998755677899977643
No 55
>3ml1_A NAPA, periplasmic nitrate reductase; heterodimer, oxidoreductase; HET: MGD HEC; 1.60A {Ralstonia eutropha} PDB: 3o5a_A* 1ogy_A* 2nya_A*
Probab=21.50 E-value=20 Score=40.40 Aligned_cols=53 Identities=17% Similarity=0.271 Sum_probs=36.7
Q ss_pred HHhcCCeeEEEccccccccccccccc-CCCCc--cCCCeEEEEcCCCCCCCcccceee
Q psy10043 270 NADRADLILCVGSSLKVLRKYGWLWG-LDRPK--KERPKLCIVNLQWTPKDDQATLKI 324 (504)
Q Consensus 270 ~~~~aDllLVvGTSL~V~~~~~~~~~-~~~~~--~~~~~liiIN~~~t~~d~~a~~~i 324 (504)
.+.+||+||++|+-.... .|..+. +..++ .++.++|+|++..+.....|++.|
T Consensus 175 d~~~ad~il~~G~N~~~~--~p~~~~~i~~a~~~~~G~klivIDPr~t~ta~~AD~~l 230 (802)
T 3ml1_A 175 DFEAADAFVLWGSNMAEM--HPILWTRVTDRRLSHPKTRVVVLSTFTHRCFDLADIGI 230 (802)
T ss_dssp GGGTCSEEEEESCCHHHH--SHHHHHHHHHHHHHSTTCEEEEEESSBCGGGGTCSEEE
T ss_pred HHhhCCEEEEECCChHHh--ChHHHHHHHHHHHhcCCCEEEEEeCCCCchhHHhccEe
Confidence 467999999999987653 232211 11122 368899999999998877787654
No 56
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=21.47 E-value=1.1e+02 Score=34.19 Aligned_cols=44 Identities=18% Similarity=0.378 Sum_probs=26.5
Q ss_pred ccCCCCC-CCCCCccccEEEecCCCCCCChhhHHHHHHHHhcCCeeEEEccc
Q psy10043 233 HQTARKC-SCGEPLLDTIIHFGEKGVLLWPLNWDGANKNADRADLILCVGSS 283 (504)
Q Consensus 233 ~~~~P~C-~Cgg~LrP~IV~FGE~~~~~~~~~~~~a~~~~~~aDllLVvGTS 283 (504)
|...-.| .|| |.+-+.+... ....+..|.+.+++-.++++=|-+
T Consensus 180 hAqp~aC~~CG----P~l~l~~~~~---~~~~i~~aa~~L~~G~IVa~pt~t 224 (761)
T 3vth_A 180 HAQPVACFDCG----PSLSFVGEGC---FDDEIKCVAKALKEGKIVAIKGIG 224 (761)
T ss_dssp TCTTCCCTTTS----CCEEEESSCC---CSCHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCCCcCCccC----CeeEEeCCCC---chHHHHHHHHHHHcCCEEEEECCc
Confidence 4445567 999 4444554332 123577888888877776665543
No 57
>1kqf_A FDH-N alpha, formate dehydrogenase, nitrate-inducible, major S; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1kqg_A*
Probab=21.34 E-value=18 Score=41.82 Aligned_cols=54 Identities=17% Similarity=0.366 Sum_probs=37.2
Q ss_pred HHhcCCeeEEEcccccccccccccccCCCCc-cCCCeEEEEcCCCCCCCcccceee
Q psy10043 270 NADRADLILCVGSSLKVLRKYGWLWGLDRPK-KERPKLCIVNLQWTPKDDQATLKI 324 (504)
Q Consensus 270 ~~~~aDllLVvGTSL~V~~~~~~~~~~~~~~-~~~~~liiIN~~~t~~d~~a~~~i 324 (504)
.+.+||+||++|+-......-.+.+ +..+. .++.++|+|++..+.....|++.+
T Consensus 219 D~~~ad~il~~G~N~~~~~p~~~~~-i~~a~~~~GaklivIDPr~t~ta~~AD~~l 273 (1015)
T 1kqf_A 219 DIKNANVVMVMGGNAAEAHPVGFRW-AMEAKNNNDATLIVVDPRFTRTASVADIYA 273 (1015)
T ss_dssp GGGGCSEEEEESCCHHHHSTTTTHH-HHHHHHHSCCEEEEECSSCCHHHHTCSEEE
T ss_pred HHhhCCEEEEECCChhhhCchHHHH-HHHHHHHCCCeEEEEeCCCCchhHhhCeee
Confidence 4679999999999876542111112 22344 678999999999887766777554
No 58
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=21.20 E-value=15 Score=40.44 Aligned_cols=54 Identities=15% Similarity=0.157 Sum_probs=36.9
Q ss_pred HHhcCCeeEEEcccccccccccc-cccCCCCccCCCeEEEEcCCCCCCCcccceeec
Q psy10043 270 NADRADLILCVGSSLKVLRKYGW-LWGLDRPKKERPKLCIVNLQWTPKDDQATLKIN 325 (504)
Q Consensus 270 ~~~~aDllLVvGTSL~V~~~~~~-~~~~~~~~~~~~~liiIN~~~t~~d~~a~~~i~ 325 (504)
.+.+||++|++|+...... |. ...+..+..++.++|+|++..+.....|+..+.
T Consensus 163 di~~ad~il~~G~n~~~~~--p~~~~~l~~a~~~G~klividPr~t~ta~~Ad~~l~ 217 (715)
T 2iv2_X 163 EIDNTDLVFVFGYNPADSH--PIVANHVINAKRNGAKIIVCDPRKIETARIADMHIA 217 (715)
T ss_dssp GGGGCSEEEEESCCHHHHC--HHHHHHHHHHHHTTCEEEEECSSCCHHHHTCSEEEC
T ss_pred HHhcCCEEEEEcCChHHhC--HHHHHHHHHHHHCCCeEEEEcCCCCchhHhhCEEec
Confidence 3578999999999866542 21 111223456789999999998877666675543
No 59
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=21.04 E-value=28 Score=28.94 Aligned_cols=14 Identities=43% Similarity=0.888 Sum_probs=11.9
Q ss_pred cceeeecCCCcccC
Q psy10043 114 KHVVVYTGAGISTA 127 (504)
Q Consensus 114 k~iVV~TGAGISt~ 127 (504)
++|++..|+|+||+
T Consensus 4 kkIll~Cg~G~sTS 17 (106)
T 1e2b_A 4 KHIYLFSSAGMSTS 17 (106)
T ss_dssp EEEEEECSSSTTTH
T ss_pred cEEEEECCCchhHH
Confidence 57899999999875
Done!