Your job contains 1 sequence.
>psy10044
MVTHPDTNHAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLH
PYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRR
EILDLYLGKIVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYAR
DKVLMGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITLNLSLIG
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10044
(235 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 926 5.5e-93 1
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 750 2.5e-74 1
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 697 1.0e-68 1
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 697 1.0e-68 1
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 695 1.7e-68 1
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 695 1.7e-68 1
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 694 2.1e-68 1
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 693 2.7e-68 1
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 691 4.4e-68 1
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 691 4.4e-68 1
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 691 4.4e-68 1
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 691 4.4e-68 1
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 691 4.4e-68 1
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 680 6.5e-67 1
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 598 1.8e-60 2
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 598 3.2e-58 1
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 573 1.4e-55 1
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 573 1.4e-55 1
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 563 1.6e-54 1
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 563 1.6e-54 1
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 558 5.5e-54 1
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 541 3.5e-52 1
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 538 7.2e-52 1
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 538 7.2e-52 1
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 536 1.2e-51 1
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 536 1.2e-51 1
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 534 1.9e-51 1
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 533 2.4e-51 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 539 2.5e-51 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 539 2.5e-51 1
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 529 9.5e-51 1
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 525 1.7e-50 1
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 524 2.2e-50 1
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 524 2.2e-50 1
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 524 2.2e-50 1
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 524 2.2e-50 1
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 520 5.8e-50 1
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 519 7.4e-50 1
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 518 9.5e-50 1
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 517 1.2e-49 1
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 517 1.2e-49 1
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 511 5.2e-49 1
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 506 1.8e-48 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 504 2.9e-48 1
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 504 2.9e-48 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 505 5.1e-48 1
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 499 9.8e-48 1
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 498 1.2e-47 1
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 489 1.1e-46 1
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 486 1.3e-45 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 477 2.1e-45 1
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 469 8.4e-44 1
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 460 2.4e-43 1
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 456 8.0e-43 1
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 456 1.4e-42 1
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 450 1.6e-42 1
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 455 3.6e-42 1
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 451 6.1e-42 1
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 449 9.0e-42 1
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 448 1.6e-41 1
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 443 4.5e-41 1
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 437 4.6e-41 1
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 444 4.8e-41 1
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 442 5.2e-41 1
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 442 6.1e-41 1
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 441 8.1e-41 1
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 440 9.6e-41 1
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 438 1.7e-40 1
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 430 2.0e-40 1
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 437 2.3e-40 1
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 436 2.9e-40 1
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 435 3.9e-40 1
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 435 4.1e-40 1
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 434 4.7e-40 1
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 434 4.8e-40 1
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 430 1.1e-39 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 430 1.1e-39 1
ZFIN|ZDB-GENE-030131-5391 - symbol:spg7 "spastic parapleg... 430 1.2e-39 1
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 429 1.7e-39 1
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 429 1.7e-39 1
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 428 2.2e-39 1
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 426 3.6e-39 1
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 423 7.9e-39 1
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 422 8.3e-39 1
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 412 1.2e-37 1
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 409 2.5e-37 1
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 369 5.7e-35 2
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 370 4.9e-34 1
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 369 7.8e-33 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 348 9.8e-32 1
RGD|727940 - symbol:Spg7 "spastic paraplegia 7 homolog (h... 303 5.9e-31 2
UNIPROTKB|Q7TT47 - symbol:Spg7 "Paraplegin" species:10116... 303 5.9e-31 2
WB|WBGene00021615 - symbol:Y47C4A.1 species:6239 "Caenorh... 326 2.1e-29 1
WB|WBGene00022429 - symbol:Y108F1.1 species:6239 "Caenorh... 326 2.1e-29 1
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 327 1.7e-28 1
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 327 1.7e-28 1
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 317 2.5e-27 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 314 4.6e-27 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 314 4.7e-27 1
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 302 7.3e-27 1
WARNING: Descriptions of 538 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 178/221 (80%), Positives = 197/221 (89%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
HA GPEFDEVLVGQGARRVRDLFKAAK R PCV+FIDEIDSVGAKRTNSVLHPYANQTIN
Sbjct: 363 HAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNSVLHPYANQTIN 422
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL+EMDGFHQN GV+VLGATNRRDDLD+ALLRPGRFD+EV V PD+TGR+EIL LYL
Sbjct: 423 QLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLT 482
Query: 129 KIVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
KI+ ID+D LARGT+GFTGADLENM+NQAALRAAIDG V+MK+LE ARDKVLMGPE
Sbjct: 483 KILHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDKVLMGPE 542
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
RK+RLPDEE N ITAYHEGGHA+VAF+TK+S H H +T+
Sbjct: 543 RKARLPDEEANTITAYHEGGHAIVAFYTKES--HPLHKVTI 581
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 146/223 (65%), Positives = 173/223 (77%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
H G EFDEVLVGQGARRVRDLF AK R PC++FIDEIDSVG+KR ++ +HPYANQTIN
Sbjct: 311 HTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKRVSNSIHPYANQTIN 370
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL+EMDGF +NEG++V+ ATNR DDLDKALLRPGRFD+ V VP PD GR +I + YL
Sbjct: 371 QLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLS 430
Query: 129 KIV-SKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KIV S ID LA+G+TGFTGAD+ENMVNQAAL+AA D VTM YL+ ARD+VLMGP
Sbjct: 431 KIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARDRVLMGP 490
Query: 188 ERKS-RLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
R R+PDEE N TAYHE GH +V+ +TKD+ H +T+
Sbjct: 491 ARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATP--LHKVTI 531
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 131/212 (61%), Positives = 166/212 (78%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+A G EFDE+ VG GA R+R LF+ AK PCV+FIDE+DSVG KR S +HPY+ QTIN
Sbjct: 341 YASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTIN 400
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLLAEMDGF NEGVV++GATN + LD AL+RPGRFD++V VP PD GR EIL YL
Sbjct: 401 QLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRTEILKWYLN 460
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KI +++D + +ARGT GF+GA+LEN+VNQAAL+AA+DG VTMK LE+++DK+LMGP
Sbjct: 461 KIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFSKDKILMGP 520
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ER+S DE+ ITAYHE GHA++A++TKD+
Sbjct: 521 ERRSVEIDEKNKTITAYHESGHAIIAYYTKDA 552
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 131/212 (61%), Positives = 166/212 (78%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+A G EFDE+ VG GA R+R LF+ AK PCV+FIDE+DSVG KR S +HPY+ QTIN
Sbjct: 346 YASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTIN 405
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLLAEMDGF NEGVV++GATN + LD AL+RPGRFD++V VP PD GR EIL YL
Sbjct: 406 QLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRTEILKWYLN 465
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KI +++D + +ARGT GF+GA+LEN+VNQAAL+AA+DG VTMK LE+++DK+LMGP
Sbjct: 466 KIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFSKDKILMGP 525
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ER+S DE+ ITAYHE GHA++A++TKD+
Sbjct: 526 ERRSVEIDEKNKTITAYHESGHAIIAYYTKDA 557
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/212 (61%), Positives = 166/212 (78%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+A G EFDE+ VG GA R+R+LF+ AK PCV+FIDE+DSVG KR S +HPY+ QTIN
Sbjct: 344 YASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTIN 403
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLLAEMDGF NEGV+++GATN + LD AL+RPGRFD++V VP PD GR EIL YL
Sbjct: 404 QLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 463
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KI K++D + +ARGT GF+GA+LEN+VNQAAL+AA+DG VTMK LE+++DK+LMGP
Sbjct: 464 KIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGP 523
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ER+S D + ITAYHE GHA++A++TKD+
Sbjct: 524 ERRSVEIDNKNKTITAYHESGHAIIAYYTKDA 555
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/212 (61%), Positives = 166/212 (78%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+A G EFDE+ VG GA R+R+LF+ AK PCV+FIDE+DSVG KR S +HPY+ QTIN
Sbjct: 344 YASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTIN 403
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLLAEMDGF NEGV+++GATN + LD AL+RPGRFD++V VP PD GR EIL YL
Sbjct: 404 QLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 463
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KI K++D + +ARGT GF+GA+LEN+VNQAAL+AA+DG VTMK LE+++DK+LMGP
Sbjct: 464 KIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGP 523
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ER+S D + ITAYHE GHA++A++TKD+
Sbjct: 524 ERRSVEIDNKNKTITAYHESGHAIIAYYTKDA 555
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 130/212 (61%), Positives = 165/212 (77%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+A G EFDE+ VG GA R+R+LF+ AK PCV+FIDE+DSVG KR S +HPY+ QTIN
Sbjct: 351 YASGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKRIESPMHPYSRQTIN 410
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLLAEMDGF NEGV+++GATN + LD AL+RPGRFD++V VP PD GR EIL YL
Sbjct: 411 QLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLK 470
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KI V ++ + +ARGT GF+GA+LEN+VNQAAL+AA+DG VTMK LE+A+DK+LMGP
Sbjct: 471 KIKVDSAVEAEVIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFAKDKILMGP 530
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ER+S D+ ITAYHE GHA++A++TKD+
Sbjct: 531 ERRSAEIDKRNKEITAYHESGHAIIAYYTKDA 562
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 134/212 (63%), Positives = 165/212 (77%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+A G EFDE+ VG GA R+R+LFK AK PCV+FIDE+DSVG KR S +HPY+ QTIN
Sbjct: 358 YASGSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDELDSVGGKRIESPMHPYSRQTIN 417
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLLAEMDGF NEGV+V+GATN + LD AL+RPGRFD++V VP PD GR EIL+ YL
Sbjct: 418 QLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVTVPIPDVKGRTEILEWYLK 477
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KI V ID + +ARGT GF+GA+LEN+VNQAAL+AA DG VTMK L++A+DK+LMGP
Sbjct: 478 KIKVDSAIDAEIIARGTVGFSGAELENLVNQAALKAAADGKDLVTMKELKFAKDKILMGP 537
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ER+S D+ ITAYHE GHA+VA++TKD+
Sbjct: 538 ERRSVEIDKRNKTITAYHESGHAIVAYYTKDA 569
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 129/212 (60%), Positives = 166/212 (78%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+A G EFDE+ VG GA R+R+LF+ AK PCV+FIDE+DSVG KR S +HPY+ QTIN
Sbjct: 344 YASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTIN 403
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLLAEMDGF NEGV+++GATN + LD AL+RPGRFD++V VP PD GR EIL YL
Sbjct: 404 QLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 463
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KI +++D + +ARGT GF+GA+LEN+VNQAAL+AA+DG VTMK LE+++DK+LMGP
Sbjct: 464 KIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGP 523
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ER+S D + ITAYHE GHA++A++TKD+
Sbjct: 524 ERRSVEIDNKNKTITAYHESGHAIIAYYTKDA 555
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 129/212 (60%), Positives = 166/212 (78%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+A G EFDE+ VG GA R+R+LF+ AK PCV+FIDE+DSVG KR S +HPY+ QTIN
Sbjct: 378 YASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTIN 437
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLLAEMDGF NEGV+++GATN + LD AL+RPGRFD++V VP PD GR EIL YL
Sbjct: 438 QLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 497
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KI +++D + +ARGT GF+GA+LEN+VNQAAL+AA+DG VTMK LE+++DK+LMGP
Sbjct: 498 KIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGP 557
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ER+S D + ITAYHE GHA++A++TKD+
Sbjct: 558 ERRSVEIDNKNKTITAYHESGHAIIAYYTKDA 589
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 129/212 (60%), Positives = 166/212 (78%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+A G EFDE+ VG GA R+R+LF+ AK PCV+FIDE+DSVG KR S +HPY+ QTIN
Sbjct: 344 YASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTIN 403
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLLAEMDGF NEGV+++GATN + LD AL+RPGRFD++V VP PD GR EIL YL
Sbjct: 404 QLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 463
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KI +++D + +ARGT GF+GA+LEN+VNQAAL+AA+DG VTMK LE+++DK+LMGP
Sbjct: 464 KIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGP 523
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ER+S D + ITAYHE GHA++A++TKD+
Sbjct: 524 ERRSVEIDNKNKTITAYHESGHAIIAYYTKDA 555
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 129/212 (60%), Positives = 166/212 (78%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+A G EFDE+ VG GA R+R+LF+ AK PCV+FIDE+DSVG KR S +HPY+ QTIN
Sbjct: 402 YASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTIN 461
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLLAEMDGF NEGV+++GATN + LD AL+RPGRFD++V VP PD GR EIL YL
Sbjct: 462 QLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 521
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KI +++D + +ARGT GF+GA+LEN+VNQAAL+AA+DG VTMK LE+++DK+LMGP
Sbjct: 522 KIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGP 581
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ER+S D + ITAYHE GHA++A++TKD+
Sbjct: 582 ERRSVEIDNKNKTITAYHESGHAIIAYYTKDA 613
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 129/212 (60%), Positives = 166/212 (78%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+A G EFDE+ VG GA R+R+LF+ AK PCV+FIDE+DSVG KR S +HPY+ QTIN
Sbjct: 397 YASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTIN 456
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLLAEMDGF NEGV+++GATN + LD AL+RPGRFD++V VP PD GR EIL YL
Sbjct: 457 QLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 516
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KI +++D + +ARGT GF+GA+LEN+VNQAAL+AA+DG VTMK LE+++DK+LMGP
Sbjct: 517 KIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGP 576
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ER+S D + ITAYHE GHA++A++TKD+
Sbjct: 577 ERRSVEIDNKNKTITAYHESGHAIIAYYTKDA 608
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 128/212 (60%), Positives = 164/212 (77%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+A G EFDE+ VG GA R+R+LF+ AK PCV+FIDE+DSVG KR +HPY+ QTI
Sbjct: 344 YASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIEFPMHPYSRQTII 403
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLLAEMDGF NEGV+++GATN + LD AL+RPGRFD++V VP PD GR EIL YL
Sbjct: 404 QLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 463
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
KI K++D + +ARGT GF+GA+LEN+VNQAAL+AA+DG VTMK LE+++DK+LMGP
Sbjct: 464 KIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGP 523
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ER+S D + ITAYHE GHA++A++TKD+
Sbjct: 524 ERRSVEIDNKNKTITAYHESGHAIIAYYTKDA 555
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 598 (215.6 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 113/207 (54%), Positives = 157/207 (75%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
G EF+E+ VG GARRVRDLF AAK +PC++FIDEID++G R N Y T+NQ+L
Sbjct: 293 GSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSR-NPKDQQYMKMTLNQML 351
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIV 131
E+DGF QNEG++V+ ATN + LDKAL+RPGRFD + VP PD GRR+IL+ ++ K++
Sbjct: 352 VELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVL 411
Query: 132 -SKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPERK 190
++++D+ +ARGT GF+GADL N+VN AAL+AA+DG VTM LE+A+D+++MG ERK
Sbjct: 412 KAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDLEFAKDRIMMGSERK 471
Query: 191 SRLPDEETNMITAYHEGGHAVVAFFTK 217
S + +E+ +TA+HEGGHA+VA T+
Sbjct: 472 SAVISDESRKLTAFHEGGHALVAIHTE 498
Score = 39 (18.8 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 15 FDEVLVGQGARRVRD 29
F VG ARRVRD
Sbjct: 52 FQSSYVGSFARRVRD 66
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 117/219 (53%), Positives = 158/219 (72%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
G EF+E+ VG GARRVR LF+AAK + PC++FIDEID+VG+ R H +T++QLL
Sbjct: 428 GSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGH--TKKTLHQLL 485
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-GKI 130
EMDGF QNEG++V+ ATN D LD AL RPGRFD + VP PD GR EIL+LYL GK
Sbjct: 486 VEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKP 545
Query: 131 VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPERK 190
+S+++DV +ARGT GF GADL N+VN AA++AA++G ++ + LE+A+D+++MG ERK
Sbjct: 546 MSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFAKDRIVMGTERK 605
Query: 191 SRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
+ E++ +TAYHE GHA+VA TK + H H T+
Sbjct: 606 TMFVSEDSKKLTAYHESGHAIVALNTKGA--HPIHKATI 642
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 116/212 (54%), Positives = 154/212 (72%)
Query: 10 AQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQ 69
A G EF+E+ VG GARR+R+LF+AAK PC+VFIDEID+VG+KR++ + T+NQ
Sbjct: 318 ASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSSRD-NSAVRMTLNQ 376
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL E+DGF QNEG+VV+ ATN LDKAL+RPGR D + VP PD GR EIL +Y K
Sbjct: 377 LLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKGRYEILKMYSNK 436
Query: 130 IV-SKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
IV SK++D+ L+R T G TGADL N++N AA++ +++G V M +E A D+V++G +
Sbjct: 437 IVLSKDVDLHVLSRRTVGMTGADLNNILNIAAIKCSVEGKKSVDMNSIEQAFDRVVVGLQ 496
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
RKS L +EE N ITAYHEGGH +V F+TK S+
Sbjct: 497 RKSPLNEEEKN-ITAYHEGGHTLVNFYTKGSD 527
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 116/212 (54%), Positives = 154/212 (72%)
Query: 10 AQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQ 69
A G EF+E+ VG GARR+R+LF+AAK PC+VFIDEID+VG+KR++ + T+NQ
Sbjct: 318 ASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSSRD-NSAVRMTLNQ 376
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL E+DGF QNEG+VV+ ATN LDKAL+RPGR D + VP PD GR EIL +Y K
Sbjct: 377 LLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKGRYEILKMYSNK 436
Query: 130 IV-SKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
IV SK++D+ L+R T G TGADL N++N AA++ +++G V M +E A D+V++G +
Sbjct: 437 IVLSKDVDLHVLSRRTVGMTGADLNNILNIAAIKCSVEGKKSVDMNSIEQAFDRVVVGLQ 496
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
RKS L +EE N ITAYHEGGH +V F+TK S+
Sbjct: 497 RKSPLNEEEKN-ITAYHEGGHTLVNFYTKGSD 527
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 112/212 (52%), Positives = 150/212 (70%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F+ K PC++FIDEID+VG R + + QT+NQ
Sbjct: 222 GSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGNDEREQTLNQ 281
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF NEGV+++ ATNR D LD ALLRPGRFD +V + PD GR +I+++++ K
Sbjct: 282 LLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVHIKK 341
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ + ++++ T+ARGT GF+GADL N+VN+AAL AA VTM EYARDKV+MG E
Sbjct: 342 VPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEYARDKVMMGAE 401
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
RKS + EE +TAYHE GHA++AFFT+ S+
Sbjct: 402 RKSLMMTEEERRLTAYHEAGHAIIAFFTEASD 433
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 112/212 (52%), Positives = 150/212 (70%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F+ K PC++FIDEID+VG R + + QT+NQ
Sbjct: 222 GSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGNDEREQTLNQ 281
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF NEGV+++ ATNR D LD ALLRPGRFD +V + PD GR +I+++++ K
Sbjct: 282 LLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVHIKK 341
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ + ++++ T+ARGT GF+GADL N+VN+AAL AA VTM EYARDKV+MG E
Sbjct: 342 VPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEYARDKVMMGAE 401
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
RKS + EE +TAYHE GHA++AFFT+ S+
Sbjct: 402 RKSLMMTEEERRLTAYHEAGHAIIAFFTEASD 433
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 109/212 (51%), Positives = 154/212 (72%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+ G EFDEV VG GA+RVR+LF A+ ++P ++FIDE+D++GAKR N Y QT+N
Sbjct: 378 YMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIGAKR-NERDAAYVKQTLN 436
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL E+DGF Q+ GV++L ATN + LDKAL RPGRFD +V V PD GR +IL ++
Sbjct: 437 QLLTELDGFSQSTGVIILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGRMDILKHHMK 496
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
+ +S ++DV +ARGT+GF+GADLEN+VNQAA+ A+ + VT K +YA+DK++MG
Sbjct: 497 NVQISTDVDVAVIARGTSGFSGADLENLVNQAAIFASRNKQSKVTPKDFDYAKDKIIMGA 556
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
E +SR+ ++ ++TAYHE GHA+VA+F+ S
Sbjct: 557 EARSRIIQDKDKLLTAYHEAGHALVAYFSPSS 588
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 104/207 (50%), Positives = 146/207 (70%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
G EFDE+ VG GA+R+R+LF A+D+ P ++FIDE+D++G KR N YA QT+NQLL
Sbjct: 291 GSEFDELYVGVGAKRIRELFSQARDKAPAIIFIDELDAIGGKR-NPKDQAYAKQTLNQLL 349
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI- 130
E+DGF Q EG++++GATN + LDKAL RPGRFD EV V PD GR +IL ++ +
Sbjct: 350 VELDGFSQTEGIIIIGATNFPESLDKALTRPGRFDKEVIVDLPDVRGRIDILKHHMQNVE 409
Query: 131 VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPERK 190
+ ++D +ARGT G +GA+L N+VNQAA+ A+ P V M + E+A+DK+LMG +K
Sbjct: 410 TADDVDPSIIARGTPGLSGAELMNLVNQAAVHASQLSAPAVDMNHFEWAKDKILMGAAKK 469
Query: 191 SRLPDEETNMITAYHEGGHAVVAFFTK 217
+ EE+ + TAYHE GHA++A F+K
Sbjct: 470 KMVITEESRINTAYHEAGHAIMAMFSK 496
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 112/212 (52%), Positives = 145/212 (68%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F+ K PC++F+DEID+VG R + + QT+NQ
Sbjct: 224 GSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGNDEREQTLNQ 283
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF NEGVV++ ATNR D LD ALLRPGRFD +V + PD GR +I+ ++ K
Sbjct: 284 LLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKIIAVHAKK 343
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ ++ ++D+ +ARGT GF+GADL N+VN+AAL AA VTM EYARDKV+MG E
Sbjct: 344 VPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTMCDFEYARDKVMMGAE 403
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
RKS + EE +TAYHE GHAVVAF S+
Sbjct: 404 RKSMVMREEERRLTAYHEAGHAVVAFHNPASD 435
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 112/212 (52%), Positives = 145/212 (68%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F+ K PC++F+DEID+VG R + + QT+NQ
Sbjct: 224 GSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGNDEREQTLNQ 283
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF NEGVV++ ATNR D LD ALLRPGRFD +V + PD GR +I+ ++ K
Sbjct: 284 LLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKIIAVHAKK 343
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ ++ ++D+ +ARGT GF+GADL N+VN+AAL AA VTM EYARDKV+MG E
Sbjct: 344 VPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTMCDFEYARDKVMMGAE 403
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
RKS + EE +TAYHE GHAVVAF S+
Sbjct: 404 RKSMVMREEERRLTAYHEAGHAVVAFHNPASD 435
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 110/221 (49%), Positives = 149/221 (67%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRDLF+ AK PC+VFIDEID+VG +R + H QT+NQ
Sbjct: 224 GSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 283
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-G 128
LL EMDGF+ NEG++++ ATNR D LD ALLRPGRFD + V PD GR+EIL +++ G
Sbjct: 284 LLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGRKEILKVHVKG 343
Query: 129 KIVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
K + ++D+D LAR T GFTGADL NMVN+AAL AA + M+ +E A ++V+ GPE
Sbjct: 344 KPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEMEEAIERVIAGPE 403
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
+KS++ E + AYHE GHA+V + ++ H I++
Sbjct: 404 KKSKVISEREKRLVAYHEAGHAMVGYLLPHTDP--VHKISI 442
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 110/221 (49%), Positives = 149/221 (67%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRDLF+ AK PC+VFIDEID+VG +R + H QT+NQ
Sbjct: 224 GSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 283
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-G 128
LL EMDGF+ NEG++++ ATNR D LD ALLRPGRFD + V PD GR+EIL +++ G
Sbjct: 284 LLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGRKEILKVHVKG 343
Query: 129 KIVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
K + ++D+D LAR T GFTGADL NMVN+AAL AA + M+ +E A ++V+ GPE
Sbjct: 344 KPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEMEEAIERVIAGPE 403
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
+KS++ E + AYHE GHA+V + ++ H I++
Sbjct: 404 KKSKVISEREKRLVAYHEAGHAMVGYLLPHTDP--VHKISI 442
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 105/206 (50%), Positives = 142/206 (68%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
G EFDEV VG GA+R+RDLF A+ R P ++FIDE+D++G KR N YA QT+NQLL
Sbjct: 347 GSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKR-NPKDQAYAKQTLNQLL 405
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI- 130
E+DGF Q G++++GATN + LDKAL RPGRFD VNV PD GR +IL ++ KI
Sbjct: 406 VELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKIT 465
Query: 131 VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPERK 190
++ N+D +ARGT G +GA+L N+VNQAA+ A V M + E+A+DK+LMG ERK
Sbjct: 466 LADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERK 525
Query: 191 SRLPDEETNMITAYHEGGHAVVAFFT 216
+ + + TA+HE GHA++A +T
Sbjct: 526 TMVLTDAARKATAFHEAGHAIMAKYT 551
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 109/212 (51%), Positives = 146/212 (68%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F+ K PC++FIDEID+VG R + QT+NQ
Sbjct: 223 GSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGNDEREQTLNQ 282
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF NEGV+++ ATNR D LD ALLRPGRFD ++ + PD GR++IL+++L K
Sbjct: 283 LLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQKILEVHLKK 342
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
I + N++V +ARGT GF+GADL N+VN++AL AA VT + EYARDK+LMG E
Sbjct: 343 IPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVTNEDFEYARDKILMGME 402
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
RKS + EE ++TAYHE GHA+ + + S+
Sbjct: 403 RKSLVMREEEKLLTAYHEAGHAITSLKLEASD 434
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 539 (194.8 bits), Expect = 2.5e-51, P = 2.5e-51
Identities = 114/227 (50%), Positives = 152/227 (66%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYA----N 64
+ GPEF E+ VGQGA+R+R LF A+ P +VFIDEID++G KR++ ++ +
Sbjct: 212 YTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQREHD 271
Query: 65 QTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILD 124
QT+NQLL EMDGF ++V+GATNR D LD ALLRPGRFD V VP PD GR++IL+
Sbjct: 272 QTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKILE 331
Query: 125 LYLGKIVS--KNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDK 182
+Y+ KI S K D++ +AR T GF+GADLEN+VN+A + A + VT+ L ARDK
Sbjct: 332 IYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINELYEARDK 391
Query: 183 VLMGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
V MGPERKS + ITAYHE GHA+VA+F + + + H T+
Sbjct: 392 VSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPI-HKATI 437
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 539 (194.8 bits), Expect = 2.5e-51, P = 2.5e-51
Identities = 114/227 (50%), Positives = 152/227 (66%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYA----N 64
+ GPEF E+ VGQGA+R+R LF A+ P +VFIDEID++G KR++ ++ +
Sbjct: 212 YTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQREHD 271
Query: 65 QTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILD 124
QT+NQLL EMDGF ++V+GATNR D LD ALLRPGRFD V VP PD GR++IL+
Sbjct: 272 QTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKILE 331
Query: 125 LYLGKIVS--KNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDK 182
+Y+ KI S K D++ +AR T GF+GADLEN+VN+A + A + VT+ L ARDK
Sbjct: 332 IYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINELYEARDK 391
Query: 183 VLMGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
V MGPERKS + ITAYHE GHA+VA+F + + + H T+
Sbjct: 392 VSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPI-HKATI 437
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 529 (191.3 bits), Expect = 9.5e-51, P = 9.5e-51
Identities = 105/213 (49%), Positives = 146/213 (68%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+ G FDE VG G+RRVR+LF AA+++ PC++FIDEID+VG R N+ H N+T+
Sbjct: 363 YTTGSSFDEKYVGVGSRRVRELFNAAREKQPCIIFIDEIDAVGKSR-NTAHH---NETLL 418
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL EMDGF N ++++GATN + LD ALLRPGRFD ++VP PD GR EI+D YL
Sbjct: 419 QLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRSEIIDHYLK 478
Query: 129 KIV-SKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
K+ + + DT+AR T GFTGADL N++N AA++A +G +++K ++ ARD +LMG
Sbjct: 479 KVKHTVEVKADTIARATPGFTGADLSNLINTAAIKAVQNGKETISIKQIDDARDDILMGR 538
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
R + + EE TAYHE GHA+VA T+ ++
Sbjct: 539 ARLNAVMSEEARRNTAYHEAGHALVAAMTEAAD 571
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 105/204 (51%), Positives = 141/204 (69%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F AK + PC++FIDEID+VG R + H QT+NQ
Sbjct: 222 GSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQ 281
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF EG++V+ ATNR D LD ALLRPGRFD +V VP PD GR IL +++ K
Sbjct: 282 LLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVPLPDIKGREYILKVHMNK 341
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ ++K++ +ARGT GF+GADL N+VN+AAL AA + V+M E A+DK++MG E
Sbjct: 342 LPLAKDVKASVIARGTPGFSGADLANIVNEAALFAARENKKDVSMSEFERAKDKIMMGAE 401
Query: 189 RKSRLPDEETNMITAYHEGGHAVV 212
R+S + ++ +TAYHE GHA+V
Sbjct: 402 RRSMVMSDDEKKLTAYHEAGHAIV 425
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 107/220 (48%), Positives = 146/220 (66%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSV-LHPYANQTINQL 70
G EF+E VG GA+RVR+LF+AA+ +PC+VFIDEIDSVG RT V HP ++ +NQL
Sbjct: 230 GSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGSRTKRVNYHP--SEALNQL 287
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-GK 129
L E+DGF EGV+V+ ATN +D LD AL+R GRFD + VP PD R+ I+D YL K
Sbjct: 288 LVELDGFDGREGVMVMAATNYQDSLDTALIRSGRFDRIIQVPLPDGKARKSIIDHYLKDK 347
Query: 130 IVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPER 189
++ +++ T+A+ T GF+GADL N+VN AAL +P +TM+ LE A++ ++MG ER
Sbjct: 348 PIASHVNTTTIAQSTPGFSGADLFNLVNWAALETTKHNLPEITMEQLENAKENLMMGKER 407
Query: 190 KSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
S L +E I A+HE GHA+VA T + H T+
Sbjct: 408 HSLLMSDEARKICAFHEAGHALVAIMTPGART--VHKATI 445
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 107/204 (52%), Positives = 143/204 (70%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F+ AK +PC++FIDEID+VG +R V H QT+NQ
Sbjct: 222 GSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQ 281
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
+L EMDGF NEG++V+ ATNR D LD ALLRPGRFD +V V PD GR +IL +++ K
Sbjct: 282 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRK 341
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ ++ +++ +ARGT GF+GADL N+VN+AAL AA +V+M E A+DK++MG E
Sbjct: 342 VPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNVSMVEFELAKDKIMMGAE 401
Query: 189 RKSRLPDEETNMITAYHEGGHAVV 212
R+S + EE TAYHE GHAVV
Sbjct: 402 RRSMVMSEEIKESTAYHEAGHAVV 425
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 106/212 (50%), Positives = 143/212 (67%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F+ AK PC++FIDEID+VG +R + H QT+NQ
Sbjct: 220 GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGMGGGHDEREQTLNQ 279
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
+L EMDGF NEGV+V+ ATNR D LD ALLRPGRFD +V V PD GR +IL +++ K
Sbjct: 280 MLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVTVGLPDIRGREQILKVHMRK 339
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ + ++ + +ARGT GF+GADL N+VN+AAL AA V+MK + A+DK++MG E
Sbjct: 340 VPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAARTARRVVSMKEFDAAKDKIMMGSE 399
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
RKS + E +TAYHE GHA++ D +
Sbjct: 400 RKSMVMSESEREMTAYHEAGHAIIGRLVPDHD 431
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 107/204 (52%), Positives = 143/204 (70%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F+ AK +PC++FIDEID+VG +R V H QT+NQ
Sbjct: 222 GSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQ 281
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
+L EMDGF NEG++V+ ATNR D LD ALLRPGRFD +V V PD GR +IL +++ K
Sbjct: 282 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRK 341
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ ++ +++ +ARGT GF+GADL N+VN+AAL AA +V+M E A+DK++MG E
Sbjct: 342 VPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNVSMVEFELAKDKIMMGAE 401
Query: 189 RKSRLPDEETNMITAYHEGGHAVV 212
R+S + EE TAYHE GHAVV
Sbjct: 402 RRSMVMSEEIKESTAYHEAGHAVV 425
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 108/221 (48%), Positives = 147/221 (66%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F+ AK PC++FIDEID+VG +R + H QT+NQ
Sbjct: 223 GSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 282
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
+L EMDGF NEG++V+ ATNR D LD ALLRPGRFD +V V PD GR +IL +++ K
Sbjct: 283 MLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVVGLPDVRGREQILKVHMRK 342
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S+++ +ARGT GF+GADL N+VN+AAL AA V M+ E A+DK++MG E
Sbjct: 343 VPLSEDVKASVIARGTPGFSGADLANLVNEAALFAARGNRRVVGMEEFERAKDKIMMGAE 402
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
R+S + E +TAYHE GHA+V E+ H +T+
Sbjct: 403 RRSMVMSEAEKEMTAYHEAGHAIVGCLVP--EHDPVHKVTI 441
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 110/205 (53%), Positives = 137/205 (66%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRDLF K PC++FIDEID+VG R + H QT+NQ
Sbjct: 219 GSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQ 278
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF NEGV+++ ATNR D LD ALLRPGRFD +V VP PD GR IL ++ K
Sbjct: 279 LLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGREMILKVHTKK 338
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
++ ++D+ +ARGT GF+GADL N+VN+AAL AA V MK + A+DKVLMG E
Sbjct: 339 TPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKSFVEMKDFDDAKDKVLMGVE 398
Query: 189 RKSRLPDEETNMITAYHEGGHAVVA 213
R+S + EE TAYHE GH +VA
Sbjct: 399 RRSMVISEEEKKNTAYHEAGHTLVA 423
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 105/213 (49%), Positives = 151/213 (70%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
G +FDE+ VG GA+RVR+LF AA+ + P ++FIDE+D++G KR N+ + QT+NQLL
Sbjct: 333 GSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKR-NARDAAHMRQTLNQLL 391
Query: 72 AEMDGFHQNEG----VVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
++DGF +NE VV +GATN + LD AL RPGRFD ++VP PD GR IL +
Sbjct: 392 VDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHT 451
Query: 128 GKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMG 186
+ + K++D+ +ARGT+GF GADL N++NQAA+ A+ + V+M+ LE+++D++LMG
Sbjct: 452 RHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDRILMG 511
Query: 187 PERKSRLPDEETNMITAYHEGGHAVVAFFTKDS 219
ERKS E ++TAYHEGGHA+VA FTK++
Sbjct: 512 AERKSAFITPENKLMTAYHEGGHALVALFTKNA 544
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 110/204 (53%), Positives = 139/204 (68%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F+ AK PC+VFIDEID+VG R + QT+NQ
Sbjct: 222 GSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQ 281
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF NEGV++L ATNR+D LD ALLRPGRFD V V PD GR +IL ++ K
Sbjct: 282 LLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKILGVHARK 341
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ ++D+ +ARGT GF+GADL N+VN+AAL AA G VTM+ E A+DKV+MG E
Sbjct: 342 TPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENAKDKVMMGAE 401
Query: 189 RKSRLPDEETNMITAYHEGGHAVV 212
R+S + ++ TAYHE GHAVV
Sbjct: 402 RRSMVLTQDQKEKTAYHEAGHAVV 425
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 110/204 (53%), Positives = 139/204 (68%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F+ AK PC+VFIDEID+VG R + QT+NQ
Sbjct: 222 GSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQ 281
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF NEGV++L ATNR+D LD ALLRPGRFD V V PD GR +IL ++ K
Sbjct: 282 LLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKILGVHARK 341
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ ++D+ +ARGT GF+GADL N+VN+AAL AA G VTM+ E A+DKV+MG E
Sbjct: 342 TPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENAKDKVMMGAE 401
Query: 189 RKSRLPDEETNMITAYHEGGHAVV 212
R+S + ++ TAYHE GHAVV
Sbjct: 402 RRSMVLTQDQKEKTAYHEAGHAVV 425
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 107/221 (48%), Positives = 146/221 (66%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRD+F+ AK PC++FIDEID+VG +R + H QT+NQ
Sbjct: 218 GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 277
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
+L EMDGF NEG++V+ ATNR D LD ALLRPGRFD +V V PD GR +IL +++ +
Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRR 337
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ ++ +ID +ARGT GF+GADL N+VN+AAL AA V+M E A+DK++MG E
Sbjct: 338 VPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAE 397
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
R+S + E TAYHE GHA++ E+ H +T+
Sbjct: 398 RRSMVMTEAQKESTAYHEAGHAIIGRLVP--EHDPVHKVTI 436
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 104/202 (51%), Positives = 139/202 (68%)
Query: 14 EFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQLL 71
EF E+ VG GA RVRDLF+ AK + PC+VFIDEID+VG +R + + QTINQLL
Sbjct: 330 EFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLL 389
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-GKI 130
EMDGF N GV+VL ATNR D LD ALLRPGRFD +V V PD GR +IL ++ GK
Sbjct: 390 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKA 449
Query: 131 VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPERK 190
+ K++D D +AR T GFTGADL+N++N+AA+ AA + ++ + A ++++ GPE+K
Sbjct: 450 LGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKK 509
Query: 191 SRLPDEETNMITAYHEGGHAVV 212
+ + EE + AYHE GHA+V
Sbjct: 510 NAVVSEEKKRLVAYHEAGHALV 531
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 107/219 (48%), Positives = 146/219 (66%)
Query: 14 EFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQLL 71
+F E+ VG GA RVRDLF AK P ++FIDE+D+VG R + H QT+NQLL
Sbjct: 243 QFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGGHDEREQTLNQLL 302
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI- 130
+EMDGF ++ V+V+ ATNR D LD ALLRPGRFD V + PD+ R +IL ++ KI
Sbjct: 303 SEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRDREKILHVHTRKIP 362
Query: 131 VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPERK 190
+ K++D+ +ARGT G GADLEN+VN+AA+ AA + VTM+++E A+DKVLMG ERK
Sbjct: 363 LDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENAATVTMEHMERAKDKVLMGGERK 422
Query: 191 SRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
+ ++E ITAYHE GH +VA ++ H +T+
Sbjct: 423 MFITEQEKR-ITAYHEAGHTIVAKLLPGTDP--VHKVTI 458
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 103/202 (50%), Positives = 139/202 (68%)
Query: 14 EFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQLL 71
EF E+ VG GA RVRDLF+ AK + PC+VFIDEID+VG +R + + QTINQLL
Sbjct: 318 EFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLL 377
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-GKI 130
EMDGF N GV+VL ATNR D LD ALLRPGRFD +V V PD GR +IL ++ GK
Sbjct: 378 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKA 437
Query: 131 VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPERK 190
+ K++D + +AR T GFTGADL+N++N+AA+ AA + ++ + A ++++ GPE+K
Sbjct: 438 IGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKK 497
Query: 191 SRLPDEETNMITAYHEGGHAVV 212
+ + EE + AYHE GHA+V
Sbjct: 498 NAVVSEEKKRLVAYHEAGHALV 519
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 505 (182.8 bits), Expect = 5.1e-48, P = 5.1e-48
Identities = 105/212 (49%), Positives = 140/212 (66%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRDLF+ AK +PC++F+DEID+VG +R + H QT+NQ
Sbjct: 229 GSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQ 288
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-G 128
LL EMDGF GV+++ ATNR D LD ALLRPGRFD ++ V PD GRR +L ++ G
Sbjct: 289 LLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKG 348
Query: 129 KIVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
K ++ + D+D LA+ T G TGADL N++N+AAL A + +T LE A D+V+ GP
Sbjct: 349 KPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPR 408
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
RK R+ E+ ITAYHEGGH + A+ D E
Sbjct: 409 RKGRIISEQEKKITAYHEGGHTLAAWAMPDIE 440
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 101/221 (45%), Positives = 144/221 (65%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRDLF+ AK PC++FIDEID+VG +R + H QT+NQ
Sbjct: 228 GSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 287
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-G 128
LL EMDGF NEG++++ ATNR D LD ALLRPGRFD ++ V PD GR +L ++
Sbjct: 288 LLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPDVNGREAVLKVHARN 347
Query: 129 KIVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
K + +NI++ +A T GF+GADLEN++N+AAL AA + M ++ A D+V+ GP
Sbjct: 348 KPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDMSDIDEATDRVIAGPA 407
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
+KSR+ E+ I A+HE GH V+ +++ + H +T+
Sbjct: 408 KKSRVISEKERNIVAFHEAGHTVIGVVLDEAD--VVHKVTI 446
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 99/221 (44%), Positives = 145/221 (65%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG GA RVRDLF+ AK PC++FIDEID+VG +R + H QT+NQ
Sbjct: 227 GSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 286
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-G 128
LL EMDGF NEG++++ ATNR D LD ALLRPGRFD ++ V PD GR +L ++
Sbjct: 287 LLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARN 346
Query: 129 KIVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
K + + +++ ++A T GF+GADLEN++N+AAL AA + + ++ A D+V+ GP
Sbjct: 347 KPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPA 406
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITL 229
+KSR+ ++ I AYHEGGH V+ +++ + H +T+
Sbjct: 407 KKSRVISKKERNIVAYHEGGHTVIGLVLDEAD--MVHKVTI 445
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 100/212 (47%), Positives = 143/212 (67%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G EF E+ VG GA RVRDLFK AK+ PC++FIDEID+VG +R + + QT+NQ
Sbjct: 238 GSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQ 297
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-G 128
LL EMDGF N G++++ ATNR D LD AL+RPGRFD +V V PDY+GR+EIL+++
Sbjct: 298 LLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARN 357
Query: 129 KIVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
K ++ + +D++AR T GF+GADL N++N+AA+ A +T+ ++ A D+V+ G E
Sbjct: 358 KKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGME 417
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
+ L D ++ + AYHE GHA+V KD +
Sbjct: 418 G-TPLVDSKSKRLIAYHEVGHAIVGTLLKDHD 448
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 486 (176.1 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 108/230 (46%), Positives = 151/230 (65%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRT--NSV-LHPYANQTIN 68
G EF E+ VG GA RVRDLFK A++ P +VF+DEID++G +R+ N+ + T+N
Sbjct: 439 GSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDAIGKQRSKGNATGANDERETTLN 498
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL EMDGF ++ VVVL TNR D LD+AL+RPGRFD V++ P+ GR+EI D++L
Sbjct: 499 QLLVEMDGFDTSDHVVVLAGTNRPDILDRALMRPGRFDRHVHIDNPELLGRKEIFDVHLQ 558
Query: 129 KI-VSKNIDVDT---LARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
KI + K+ID D LA T GF+GAD+ N+ N+AAL AA VT+++ E A ++V+
Sbjct: 559 KITLQKDIDPDLSGRLAALTPGFSGADIANVCNEAALIAARYNAEFVTLRHFELAIERVI 618
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITLNLSLI 234
G E+KS+L + E I AYHE GHA+ ++ K HP+ L +S+I
Sbjct: 619 GGVEKKSKLLNPEEQKIVAYHEAGHAICGWYLK-----YAHPL-LKVSII 662
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 101/204 (49%), Positives = 134/204 (65%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G EF E+ VG GA RVRDLF AK PC++FIDEID+VG +R + H QT+NQ
Sbjct: 225 GSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 284
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-G 128
+L EMDGF + V+V+ ATNR D LD ALLRPGRFD V + PD TGR IL ++ G
Sbjct: 285 ILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDITGREAILKIHAKG 344
Query: 129 KIVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
K ++ ++++ LA+ T GF+GADL N++N+AA+ AA V + LE + D+V+ GPE
Sbjct: 345 KPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVETEDLEESIDRVIAGPE 404
Query: 189 RKSRLPDEETNMITAYHEGGHAVV 212
RKSR + +TAYHE GH +V
Sbjct: 405 RKSRRISTQEKEVTAYHETGHGLV 428
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 469 (170.2 bits), Expect = 8.4e-44, P = 8.4e-44
Identities = 99/215 (46%), Positives = 137/215 (63%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRD+F A+ PC++FIDEID+VG KR ++ Q T+NQ
Sbjct: 394 GSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHSEQENTLNQ 453
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF+ VVVL ATNR D LDKAL+RPGRFD ++ VP PD GR I ++LG
Sbjct: 454 LLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLGN 513
Query: 130 IVSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLM 185
+ + ++D + L+R T GFTGAD+ N+ N+AAL AA D + +K+ E A ++V+
Sbjct: 514 LKT-SLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQAIERVIA 572
Query: 186 GPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+ + E A+HE GHAV +F + ++
Sbjct: 573 GMEKKTNVLAPEEKRTVAHHEAGHAVAGWFLEHAD 607
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 460 (167.0 bits), Expect = 2.4e-43, P = 2.4e-43
Identities = 96/208 (46%), Positives = 135/208 (64%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G EF E+ VG GA RVRDLFK AK+ PC+VF+DEID+VG +R + + QT+NQ
Sbjct: 286 GSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQ 345
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG- 128
LL EMDGF N GV+V+ ATNR D LD ALLRPGRFD +V+V PD GR +IL ++ G
Sbjct: 346 LLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGN 405
Query: 129 KIVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
K + ++ +A T GF+GADL N++N+AA+ A G ++ K ++ + D+++ G E
Sbjct: 406 KKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGME 465
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFT 216
+ + D ++ + AYHE GHA+ T
Sbjct: 466 G-TVMTDGKSKSLVAYHEVGHAICGTLT 492
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 456 (165.6 bits), Expect = 8.0e-43, P = 8.0e-43
Identities = 96/208 (46%), Positives = 135/208 (64%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G EF E+ VG GA RVRDLFK AK+ PC+VF+DEID+VG +R + + QT+NQ
Sbjct: 293 GSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQ 352
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG- 128
LL EMDGF N GV+V+ ATNR D LD ALLRPGRFD +V+V PD GR +IL ++ G
Sbjct: 353 LLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGN 412
Query: 129 KIVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
K ++ ++ +A T GF+GADL N++N+AA+ A ++ K ++ + D+++ G E
Sbjct: 413 KKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDRIVAGME 472
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFFT 216
+ + D ++ + AYHE GHAV T
Sbjct: 473 G-TVMTDGKSKSLVAYHEVGHAVCGTLT 499
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 456 (165.6 bits), Expect = 1.4e-42, P = 1.4e-42
Identities = 100/220 (45%), Positives = 137/220 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--------HPYA 63
G EF EV+ G GA R+R LFK A+ R PC+++IDEID++G KR+
Sbjct: 351 GSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGGGSGEE 410
Query: 64 NQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREIL 123
QT+NQLL EMDG GVVVL +TNR D LDKALLRPGRFD +++ P R+++
Sbjct: 411 EQTLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMF 470
Query: 124 DLYLGKIVSKNIDVD---TLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYAR 180
+LY+ KI + + LA T GFTGAD+ N+ N++A+RAA + VT K +EYA
Sbjct: 471 ELYMRKIKLDHAPQEYSQRLAALTPGFTGADIMNVCNESAIRAASNKCHVVTHKDMEYAL 530
Query: 181 DKVLMGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
D+VL G E++SR EE + AYHE GHA+V + + ++
Sbjct: 531 DRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTD 570
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 450 (163.5 bits), Expect = 1.6e-42, P = 1.6e-42
Identities = 100/214 (46%), Positives = 137/214 (64%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL---HPYANQTIN 68
G F E+ VG GA RVRDLF+ AK P +VFIDEID++G R S + + QT+N
Sbjct: 244 GSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIGKSRAASGMMGGNDEREQTLN 303
Query: 69 QLLAEMDGFH-QNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
QLLAEMDGF ++ V+VL ATNR + LD ALLRPGRFD +V V PD+ GR +IL +++
Sbjct: 304 QLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDRQVLVDKPDFKGRCDILKVHM 363
Query: 128 GKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMG 186
+ +S + V+ +AR T G GADL N++N+AAL A D +V L A ++ + G
Sbjct: 364 KDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRDSKKYVEQNDLVEAVERAIAG 423
Query: 187 PERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
E+KSR +E+ I YHE GHA++A TK ++
Sbjct: 424 LEKKSRRINEKEKKIVTYHECGHALIAETTKGAK 457
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 455 (165.2 bits), Expect = 3.6e-42, P = 3.6e-42
Identities = 100/211 (47%), Positives = 136/211 (64%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRT--N-SVLHPYANQTIN 68
G EF E+ VG G RVRDLF A+ TPC++FIDEID++G R+ N S + T+N
Sbjct: 468 GSEFVEMFVGVGPSRVRDLFANARKNTPCIIFIDEIDAIGKSRSAKNFSGGNDERESTLN 527
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDGF+ ++ VVVL TNR D LDKAL+RPGRFD +++ P GR++I ++L
Sbjct: 528 QILTEMDGFNTSDQVVVLAGTNRPDVLDKALMRPGRFDRHISIDRPTMDGRKQIFRVHLK 587
Query: 129 KIVSKNIDVD----TLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
KIV+K D+D L+ T GF GAD+ N VN+AAL AA + VTMK+ E A ++V+
Sbjct: 588 KIVTKE-DMDYLTGRLSALTPGFAGADIANCVNEAALVAARENAESVTMKHFERAIERVV 646
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFF 215
G E+KS + E AYHE GHA+ ++
Sbjct: 647 GGLEKKSLVLSPEEKRTVAYHEAGHAICGWY 677
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 451 (163.8 bits), Expect = 6.1e-42, P = 6.1e-42
Identities = 97/216 (44%), Positives = 135/216 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL---HPYANQTIN 68
G EF E+ VG G RVRD+F A+ +PC++FIDEID+VG KR H T+N
Sbjct: 359 GSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMGGHSEQENTLN 418
Query: 69 QLLAEMDGFHQNEG-VVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
QLL EMDGF +E V+V+ ATNR D LD ALLRPGRFD ++ VP PD GR I ++L
Sbjct: 419 QLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIKGRASIFRVHL 478
Query: 128 GKI---VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
G + + K + LA T GF+GAD+ N+ N+AAL AA D ++ K+ E A ++V+
Sbjct: 479 GPLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEAALIAARDANHEISNKHFEQAIERVV 538
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+++ +E AYHE GHA+ +F + ++
Sbjct: 539 AGMEKKTQVLQKEEKKTVAYHEAGHAIAGWFLQHAD 574
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 449 (163.1 bits), Expect = 9.0e-42, P = 9.0e-42
Identities = 102/228 (44%), Positives = 144/228 (63%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN---SVLHPYANQTIN 68
G +F E+ VG G RVRDLF+ A+ PC+VFIDEID+VG R S + T+N
Sbjct: 368 GSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAVGRARGKGGFSGSNDERENTLN 427
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL EMDGF + VVVL ATNR D LDKALLRPGRFD ++ + PD R EI ++L
Sbjct: 428 QLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDRQITIDNPDLKSREEIFRVHLA 487
Query: 129 KIV-SKNID-VDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMG 186
++ K+I+ + L++ T GF+GAD+ N+ N+AAL AA +T+++ + A D+V+ G
Sbjct: 488 ALLLDKSINYAERLSKLTPGFSGADIANVCNEAALIAARRHAEIITLEHFDAAVDRVIGG 547
Query: 187 PERKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITLNLSLI 234
E+K+++ AYHE GHAVV++F K H HP+ L +S++
Sbjct: 548 LEKKNKVLSPTEKRTVAYHEAGHAVVSWFLK----HC-HPL-LKVSIV 589
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 448 (162.8 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 99/212 (46%), Positives = 132/212 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN---SVLHPYANQTIN 68
G EF E+ VG GA RVRDLFK A++ P +VFIDEID++G R S + T+N
Sbjct: 414 GSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDERENTLN 473
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDGF + VVVL TNR D LDKALLRPGRFD +N+ P+ GR+ I ++L
Sbjct: 474 QMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLH 533
Query: 129 --KIVSKNIDV-DTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLM 185
K+ + D+ + LA T GF+GAD+ N+ N+AAL AA V + + E A ++V+
Sbjct: 534 HLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIG 593
Query: 186 GPERKSRLPDEETNMITAYHEGGHAVVAFFTK 217
G ERKS+L E + AYHE GHAV ++ K
Sbjct: 594 GVERKSKLLSPEEKKVVAYHEAGHAVCGWYLK 625
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 443 (161.0 bits), Expect = 4.5e-41, P = 4.5e-41
Identities = 100/224 (44%), Positives = 139/224 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYAN----QTI 67
GPEF EV+ G GA RVR LFK A+ R PC+V+IDEID+VG KR+ +V ++N QT+
Sbjct: 375 GPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTAV-SGFSNTEEEQTL 433
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
NQLL EMDG + V+VL ATNR D LD ALLRPGR D V + P R+EI + +L
Sbjct: 434 NQLLVEMDGMGTTDHVIVLAATNRADILDNALLRPGRLDRHVFIDLPTLQERKEIFEQHL 493
Query: 128 GKIV---SKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + + LA T GF+GAD+ N+ N+AAL AA +G V L+YA ++V+
Sbjct: 494 KSLKLTRASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTAVHTSNLDYAVERVV 553
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPIT 228
G +KS++ +E + A+HE GHA+V + + +E + IT
Sbjct: 554 AGTAKKSKVLSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSIT 597
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 437 (158.9 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 96/216 (44%), Positives = 131/216 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRDLF A+ PC++FIDEID+VG KR + Q T+NQ
Sbjct: 218 GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQ 277
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF+ VV+L TNR D LD AL+RPGRFD ++ + PPD GR I ++L
Sbjct: 278 LLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRP 337
Query: 130 I-VSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + +D D LAR T GF+GAD+ N+ N+AAL AA + K+ E A ++V+
Sbjct: 338 LKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVI 397
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+++ E AYHE GHAV +F + ++
Sbjct: 398 GGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHAD 433
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 444 (161.4 bits), Expect = 4.8e-41, P = 4.8e-41
Identities = 96/214 (44%), Positives = 134/214 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ-TINQL 70
G +F E+ VG G RVRDLFK A+ TPC+VFIDEID+VG R+ H + T+NQL
Sbjct: 420 GSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEIDAVGRARSRGGFHNDERENTLNQL 479
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L EMDGF GVVV TNR D LD ALLRPGRFD ++ V PD GR++I ++L K
Sbjct: 480 LVEMDGFSSTSGVVVFAGTNRSDVLDPALLRPGRFDRQIYVGKPDIKGRKDIFMVHL-KN 538
Query: 131 VSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMG 186
+ + +++ +A+ T GF+GAD+ N+ N+ AL AA + E A ++VL+G
Sbjct: 539 IKLDGEMEEIAKKLATLTPGFSGADIANVCNEGALVAARKDATSANFDHFEEAIERVLVG 598
Query: 187 PERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
+R++R+ E I A+HE GHAVV +F + ++
Sbjct: 599 LKRENRVLSPEERTIVAHHEAGHAVVGWFLEHTD 632
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 442 (160.7 bits), Expect = 5.2e-41, P = 5.2e-41
Identities = 98/218 (44%), Positives = 138/218 (63%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRD+F A+ PC++FIDEID++G KR L + Q T+NQ
Sbjct: 338 GSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQ 397
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
+L EMDGF+ VVVL TNR D LD AL RPGRFD ++ + PPD GR I ++L
Sbjct: 398 MLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRP 457
Query: 130 I-VSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + +++ D L+R T GFTGAD+ N+ N+AAL AA P V ++ E A ++V+
Sbjct: 458 LKLDESLTRDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVI 517
Query: 185 MGPERKSRL--PDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+++ P E+T + AYHE GHAVV +F + ++
Sbjct: 518 GGLEKKTQVLQPSEKTTV--AYHEAGHAVVGWFLEHAD 553
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 442 (160.7 bits), Expect = 6.1e-41, P = 6.1e-41
Identities = 98/218 (44%), Positives = 138/218 (63%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRD+F A+ PC++FIDEID++G KR L + Q T+NQ
Sbjct: 366 GSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQ 425
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
+L EMDGF+ + VVVL TNR D LD AL RPGRFD ++ + PPD GR I ++L
Sbjct: 426 MLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRP 485
Query: 130 I-VSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + ++ D L+R T GFTGAD+ N+ N+AAL AA P V ++ E A ++V+
Sbjct: 486 LKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVI 545
Query: 185 MGPERKSRL--PDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+++ P E+T + AYHE GHAVV +F + ++
Sbjct: 546 GGLEKKTQVLQPSEKTTV--AYHEAGHAVVGWFLEHAD 581
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 441 (160.3 bits), Expect = 8.1e-41, P = 8.1e-41
Identities = 100/224 (44%), Positives = 137/224 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYAN----QTI 67
GPEF EV+ G GA RVR LFK A+ R PC+V+IDEID+VG KR+ + + ++N QT+
Sbjct: 375 GPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTT-MSGFSNTEEEQTL 433
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
NQLL EMDG + V+VL +TNR D LD AL+RPGR D V + P RREI + +L
Sbjct: 434 NQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHL 493
Query: 128 GKIV---SKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ S LA T GF+GAD+ N+ N+AAL AA +G V EYA ++VL
Sbjct: 494 KSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVL 553
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPIT 228
G +KS++ +E + A+HE GHA+V + + +E + IT
Sbjct: 554 AGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSIT 597
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 440 (159.9 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 99/216 (45%), Positives = 136/216 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYAN----QTI 67
GPEF EV+ G GA RVR LFK A+ R PC+V+IDEID+VG KR+ S + ++N QT+
Sbjct: 375 GPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTS-MSGFSNTEEEQTL 433
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
NQLL EMDG + V+VL +TNR D LD AL+RPGR D V + P RREI + +L
Sbjct: 434 NQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHL 493
Query: 128 -G-KIVS-KNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
G K+ + LA T GF+GAD+ N+ N+AAL AA +G V EYA ++V+
Sbjct: 494 KGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFEYAVERVI 553
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G +KS++ +E + A+HE GHA+V + + +E
Sbjct: 554 AGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTE 589
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 438 (159.2 bits), Expect = 1.7e-40, P = 1.7e-40
Identities = 97/216 (44%), Positives = 135/216 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYAN----QTI 67
GPEF EV+ G GA RVR LFK A+ R PC+V+IDEID+VG KR+ + + ++N QT+
Sbjct: 375 GPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTT-MSGFSNTEEEQTL 433
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
NQLL EMDG + V+VL +TNR D LD ALLRPGR D V + P RREI + +L
Sbjct: 434 NQLLVEMDGMGTTDHVIVLASTNRADILDNALLRPGRLDRHVFIDLPTLQERREIFEHHL 493
Query: 128 GKIV---SKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + + LA T GF+GAD+ N+ N+AAL AA +G V EYA ++V+
Sbjct: 494 KSLKLTQASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFEYAVERVI 553
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G +KS++ +E + A+HE GHA+V + + +E
Sbjct: 554 AGTAKKSKILSKEEQKVVAFHESGHALVGWLLEHTE 589
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 94/216 (43%), Positives = 131/216 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRDLF A+ PC++FIDEID+VG KR + Q T+NQ
Sbjct: 166 GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQ 225
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF+ VV+L TNR D LD ALLRPGRFD ++ + PPD GR I ++L
Sbjct: 226 LLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRP 285
Query: 130 I-VSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + ++ + LAR T GF+GAD+ N+ N+AAL AA + K+ E A ++V+
Sbjct: 286 LKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVI 345
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+++ E AYHE GHAV ++ + ++
Sbjct: 346 GGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHAD 381
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 437 (158.9 bits), Expect = 2.3e-40, P = 2.3e-40
Identities = 96/216 (44%), Positives = 131/216 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRDLF A+ PC++FIDEID+VG KR + Q T+NQ
Sbjct: 374 GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQ 433
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF+ VV+L TNR D LD AL+RPGRFD ++ + PPD GR I ++L
Sbjct: 434 LLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRP 493
Query: 130 I-VSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + +D D LAR T GF+GAD+ N+ N+AAL AA + K+ E A ++V+
Sbjct: 494 LKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVI 553
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+++ E AYHE GHAV +F + ++
Sbjct: 554 GGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHAD 589
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 436 (158.5 bits), Expect = 2.9e-40, P = 2.9e-40
Identities = 97/218 (44%), Positives = 134/218 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRD+F A+ PC++F+DEID++G KR + Q T+NQ
Sbjct: 369 GSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIGRKRGRGHFGGQSEQENTLNQ 428
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF+ VVVL TNR D LD AL+RPGRFD ++ + PPD GR I ++L
Sbjct: 429 LLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGPPDIKGRSSIFRVHLRP 488
Query: 130 I-VSKNIDVDTLARG----TTGFTG--ADLENMVNQAALRAAIDGVPHVTMKYLEYARDK 182
+ + +++ D LAR T GFTG AD+ N+ N+AAL AA P V K+ E A ++
Sbjct: 489 LKLDESLSKDALARKLAALTPGFTGSGADISNVCNEAALIAARHLNPSVGEKHFEQAIER 548
Query: 183 VLMGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
V+ G E+K+++ M AYHE GHAVV +F + ++
Sbjct: 549 VIGGLEKKTQVLQPGEKMTVAYHEAGHAVVGWFLEHAD 586
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 435 (158.2 bits), Expect = 3.9e-40, P = 3.9e-40
Identities = 99/214 (46%), Positives = 128/214 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G +F E+ VG G RVR LF+ A+ P ++FIDEID++G R L + T+NQ
Sbjct: 388 GSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQ 447
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF GVVVL TNR D LDKALLRPGRFD ++ + PD GR +I +YL K
Sbjct: 448 LLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKK 507
Query: 130 IV---SKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMG 186
I + LA T GF GAD+ N+ N+AAL AA VTM + E A D+V+ G
Sbjct: 508 IKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFESAIDRVIGG 567
Query: 187 PERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
E+K+R+ + AYHE GHAVV +F + +E
Sbjct: 568 LEKKNRVISKLERRTVAYHESGHAVVGWFLEHAE 601
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 435 (158.2 bits), Expect = 4.1e-40, P = 4.1e-40
Identities = 100/230 (43%), Positives = 139/230 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSV---LHPYANQT 66
G EF E++ G GA RVRDLFK K R PC+++IDEID++G +R T S+ + QT
Sbjct: 407 GSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGSSGESEQT 466
Query: 67 INQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLY 126
+NQLL EMDG EGV++L +TNR D LDKALLRPGRFD + + P R+EI + +
Sbjct: 467 LNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEKH 526
Query: 127 LGKIVSKNIDV---DTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKV 183
L + ++ LAR T GF+GAD+ N+ N+AAL AA + V+ K LEYA +++
Sbjct: 527 LSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLEYAVERL 586
Query: 184 LMGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSENHLTHPITLNLSL 233
+ G E++S + AYHE GHA+V + +S+ L I SL
Sbjct: 587 VGGTEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSL 636
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 434 (157.8 bits), Expect = 4.7e-40, P = 4.7e-40
Identities = 95/216 (43%), Positives = 131/216 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRDLF A+ PC++FIDEID+VG KR + Q T+NQ
Sbjct: 374 GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQ 433
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF+ VV+L TNR D LD ALLRPGRFD ++ + PPD GR I ++L
Sbjct: 434 LLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRP 493
Query: 130 I-VSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + ++ D LAR T GF+GAD+ N+ N+AAL AA + K+ E A ++V+
Sbjct: 494 LKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVI 553
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+++ E AYHE GHAV ++ + ++
Sbjct: 554 GGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHAD 589
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 434 (157.8 bits), Expect = 4.8e-40, P = 4.8e-40
Identities = 96/216 (44%), Positives = 131/216 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRDLF A+ PC++FIDEID+VG KR + Q T+NQ
Sbjct: 369 GSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQ 428
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF+ VVVL TNR D LD AL+RPGRFD ++ + PPD GR I ++L
Sbjct: 429 LLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRP 488
Query: 130 I-VSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + +D + LAR T GF+GAD+ N+ N+AAL AA + K+ E A ++V+
Sbjct: 489 LKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVI 548
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+++ E AYHE GHAV +F + ++
Sbjct: 549 GGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHAD 584
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 430 (156.4 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 97/217 (44%), Positives = 131/217 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ----TI 67
G EF E+ VG GA RVRDLF A+ P ++FIDEID++G +R AN T+
Sbjct: 354 GSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATL 413
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
NQLL EMDGF ++ VVVL TNR D LD AL+RPGRFD + + PD GR++I ++L
Sbjct: 414 NQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHL 473
Query: 128 GKIVSKNIDVDT-------LARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYAR 180
++ + D LA T GFTGAD+ N N+AAL AA P++T+ + E A
Sbjct: 474 KRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAI 533
Query: 181 DKVLMGPERKSRLPDEETNMITAYHEGGHAVVAFFTK 217
++V+ G E+K+R+ +E AYHE GHAV +F K
Sbjct: 534 ERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLK 570
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 430 (156.4 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 99/211 (46%), Positives = 128/211 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL---HPYANQTIN 68
G EF E+ VG G RVRDLF A+ PC++FIDEID++G R + T+N
Sbjct: 362 GSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLN 421
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL EMDGF +E +VV TNR D LD ALLRPGRFD ++ + PD GR +I ++L
Sbjct: 422 QLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLK 481
Query: 129 KI-VSKNIDV--DTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLM 185
I + NID+ LA T+GFTGAD+ N+ N+ AL AA V M + E A ++V
Sbjct: 482 HIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERVTA 541
Query: 186 GPERKSR-LPDEETNMITAYHEGGHAVVAFF 215
G E+KSR L EE N + A+HE GHAV +F
Sbjct: 542 GLEKKSRVLSPEEKNTV-AHHEAGHAVAGWF 571
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 430 (156.4 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 95/217 (43%), Positives = 135/217 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYAN----QTI 67
G EF EV+ G GA RVR LFK A+ R PC+V+IDEID+VG KR+ + + ++N QT+
Sbjct: 366 GSEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTN-MSGFSNTEEEQTL 424
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
NQLL EMDG + V+VL +TNR D LD AL+RPGR D + + P R+EI + +L
Sbjct: 425 NQLLVEMDGMGTTDHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQERKEIFEQHL 484
Query: 128 GKIVSKNIDVD----TLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKV 183
KI+ D LA T GF+GAD+ N+ N+AAL AA +G + EYA ++V
Sbjct: 485 -KILKLTQPADFYSLRLAELTPGFSGADIANICNEAALHAAREGFKSIDTFSFEYAVERV 543
Query: 184 LMGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
+ G +KS++ +E + A+HE GHA+V + + +E
Sbjct: 544 IAGSVKKSKILSKEEQRVVAFHESGHALVGWLLEHTE 580
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 429 (156.1 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 95/216 (43%), Positives = 131/216 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRDLF A+ PC++FIDEID+VG KR + Q T+NQ
Sbjct: 373 GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQ 432
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF+ VV+L TNR D LD ALLRPGRFD ++ + PPD GR I ++L
Sbjct: 433 LLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRP 492
Query: 130 I-VSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + ++ D LAR T GF+GAD+ N+ N+AAL AA + K+ E A ++V+
Sbjct: 493 LKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVI 552
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+++ E AYHE GHAV ++ + ++
Sbjct: 553 GGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHAD 588
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 429 (156.1 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 95/216 (43%), Positives = 131/216 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRDLF A+ PC++FIDEID+VG KR + Q T+NQ
Sbjct: 373 GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQ 432
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF+ VV+L TNR D LD ALLRPGRFD ++ + PPD GR I ++L
Sbjct: 433 LLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRP 492
Query: 130 I-VSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + ++ D LAR T GF+GAD+ N+ N+AAL AA + K+ E A ++V+
Sbjct: 493 LKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVI 552
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+++ E AYHE GHAV ++ + ++
Sbjct: 553 GGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHAD 588
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 428 (155.7 bits), Expect = 2.2e-39, P = 2.2e-39
Identities = 93/216 (43%), Positives = 131/216 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRDLF A+ PC++FIDEID+VG KR + Q T+NQ
Sbjct: 375 GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQ 434
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF+ VV+L TNR D LD AL+RPGRFD ++ + PPD GR I ++L
Sbjct: 435 LLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRP 494
Query: 130 I-VSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + ++ + LAR T GF+GAD+ N+ N+AAL AA + K+ E A ++V+
Sbjct: 495 LKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVI 554
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+++ E AYHE GHAV ++ + ++
Sbjct: 555 GGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHAD 590
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 426 (155.0 bits), Expect = 3.6e-39, P = 3.6e-39
Identities = 93/216 (43%), Positives = 131/216 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ--TINQ 69
G EF E+ VG G RVRDLF A+ PC++FIDEID+VG KR + Q T+NQ
Sbjct: 375 GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQ 434
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF+ VV+L TNR D LD AL+RPGRFD ++ + PPD GR I ++L
Sbjct: 435 LLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRP 494
Query: 130 I-VSKNIDVDTLARG----TTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ + ++ + LAR T GF+GAD+ N+ N+AAL AA + K+ E A ++V+
Sbjct: 495 LKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVI 554
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+++ E AYHE GHAV ++ + ++
Sbjct: 555 GGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHAD 590
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 423 (154.0 bits), Expect = 7.9e-39, P = 7.9e-39
Identities = 96/215 (44%), Positives = 127/215 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL---HPYANQTIN 68
G +F E+ VG G RVR+LF+ A+ P ++FIDEID++G R + T+N
Sbjct: 393 GSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERESTLN 452
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL EMDGF GVVVL TNR D LDKALLRPGRFD ++ + PD GR +I +YL
Sbjct: 453 QLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLK 512
Query: 129 KIV---SKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLM 185
KI + LA T GF GAD+ N+ N+AAL AA VTM + + A D+V+
Sbjct: 513 KIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFDSAIDRVIG 572
Query: 186 GPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G E+K+R+ + AYHE GHAV +F + +E
Sbjct: 573 GLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAE 607
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 422 (153.6 bits), Expect = 8.3e-39, P = 8.3e-39
Identities = 94/216 (43%), Positives = 135/216 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYAN----QTI 67
G EF EV+ G GA RVR LF+ A+ R PC+V+IDEID+VG KR+ +V +AN QT+
Sbjct: 348 GSEFVEVIGGLGAARVRSLFREAQARAPCIVYIDEIDAVGKKRSTNV-SGFANAEEEQTL 406
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
NQLL EMDG + V+VL +TNR D LD AL+RPGR D + + P RREI + +L
Sbjct: 407 NQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPTLQERREIFEQHL 466
Query: 128 -G-KIVSK-NIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
G K++ + LA T GF+GAD+ N+ N+AAL AA +G + EYA ++V+
Sbjct: 467 KGLKLIQDASFYSQHLAELTPGFSGADIANICNEAALHAAREGHKSIDTFNFEYAVERVI 526
Query: 185 MGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G +++++ E + A+HE GHA+V + + +E
Sbjct: 527 AGTAKRNKILSPEERKVVAFHESGHALVGWLLEHTE 562
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 412 (150.1 bits), Expect = 1.2e-37, P = 1.2e-37
Identities = 98/206 (47%), Positives = 123/206 (59%)
Query: 14 EFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL---HPYANQTINQL 70
EF E+ VG GA RVRDLF AK P ++FIDEID+V R + QT+NQL
Sbjct: 393 EFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQL 452
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L EMDGF N V+VLGATNR D LD AL RPGRFD V V PD GR IL +++ K
Sbjct: 453 LTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKK 512
Query: 131 ---VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
+ ++++ ++A TTGFTGADL N+VN+AAL A +V A ++ + G
Sbjct: 513 ELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDFIQAVERSIAGI 572
Query: 188 ERKS-RLPDEETNMITAYHEGGHAVV 212
E+KS RL E + A HE GHAVV
Sbjct: 573 EKKSARLKGNE-KAVVARHEAGHAVV 597
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 409 (149.0 bits), Expect = 2.5e-37, P = 2.5e-37
Identities = 97/206 (47%), Positives = 124/206 (60%)
Query: 14 EFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNS---VLHPYANQTINQL 70
EF E+ VG GA RVRDLF AK P ++FIDEID+V R V + QT+NQL
Sbjct: 397 EFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQL 456
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L EMDGF + V+VLGATNR D LD AL RPGRFD V V PD GR IL +++ K
Sbjct: 457 LTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKK 516
Query: 131 ---VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
+ ++++ ++A TTGFTGADL N+VN+AAL A V +A ++ + G
Sbjct: 517 ELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAVERSIAGI 576
Query: 188 ERKS-RLPDEETNMITAYHEGGHAVV 212
E+K+ RL E + A HE GHAVV
Sbjct: 577 EKKTARLKGSE-KAVVARHEAGHAVV 601
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 369 (135.0 bits), Expect = 5.7e-35, Sum P(2) = 5.7e-35
Identities = 84/184 (45%), Positives = 114/184 (61%)
Query: 14 EFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLLAE 73
EF E+ VG+GA R+RDLF AA+ +P ++FIDE+D+VG KR S + +QT+NQLL E
Sbjct: 402 EFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKRGRS-FNDERDQTLNQLLTE 460
Query: 74 MDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSK 133
MDGF + V+V+ ATNR + LD AL RPGRF +V V PD GRR+IL ++L + +
Sbjct: 461 MDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIHLRDVPLE 520
Query: 134 N---IDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPERK 190
+ D +A T GF GADL N+VN+AAL AA G V + + A ++ G K
Sbjct: 521 EDAFLICDLVASLTPGFVGADLANIVNEAALLAARRGGEAVAREDIMEAIERAKFGINDK 580
Query: 191 SRLP 194
P
Sbjct: 581 EARP 584
Score = 36 (17.7 bits), Expect = 5.7e-35, Sum P(2) = 5.7e-35
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 1 MVTHPD-TNHAQGPEFDEVLVGQGARRV 27
+V + D + +G +VL+ +G+RR+
Sbjct: 174 IVPYSDFVTNLRGGSVSKVLLEEGSRRI 201
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 370 (135.3 bits), Expect = 4.9e-34, P = 4.9e-34
Identities = 82/207 (39%), Positives = 126/207 (60%)
Query: 9 HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
+ G F E+ VG GA+RVR+LF AK P +VFIDEID+VG R + + + T+N
Sbjct: 215 YQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKAR-GEMSNVERDSTLN 273
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL +MDGF N GV+V+ ATN+ + +D ALLR GRFD + + PD+ R +IL++Y+
Sbjct: 274 QLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYM- 332
Query: 129 KIVSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
K + NI+++ +A+ + GF+GA LE +VN+AA+ A V +KVL+G +
Sbjct: 333 KDKNNNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVLNKVLLGKK 392
Query: 189 RKSRLPDEETNMITAYHEGGHAVVAFF 215
+ +EE I A ++ A+ A++
Sbjct: 393 KILSFNNEEKK-IQATYQAAKALSAYY 418
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 369 (135.0 bits), Expect = 7.8e-33, P = 7.8e-33
Identities = 86/189 (45%), Positives = 119/189 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRT-----NS-VLHPYANQ 65
G EF EVLVG G+ R+RDLFK AK P V+FIDEID++ +R NS L+ A Q
Sbjct: 496 GSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQ 555
Query: 66 ----TINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRRE 121
T+NQLL E+DGF +GV+ LGATNRRD LD ALLRPGRFD ++ V PP+ GR +
Sbjct: 556 ERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLD 615
Query: 122 ILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYAR 180
IL ++ K+ +S ++D+ + A G++GA L +V +AAL A + ++ A
Sbjct: 616 ILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHNSILQSDMDDAV 675
Query: 181 DKVLMGPER 189
D++ +GP R
Sbjct: 676 DRLTVGPTR 684
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 74/186 (39%), Positives = 119/186 (63%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G E + +G+GA V+D+FK AK++ P ++FIDEID++ AKRT+++ +T+ Q
Sbjct: 237 GSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQ 296
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LLAEMDGF V ++GATNR D LD A+LRPGRFD + VP PD GR EIL ++ K
Sbjct: 297 LLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRK 356
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ ++++++++ +A+ T G GA+L+ + +A + A + +VTM A +K++ +
Sbjct: 357 MNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKK 416
Query: 189 RKSRLP 194
K + P
Sbjct: 417 VKVKEP 422
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 303 (111.7 bits), Expect = 5.9e-31, Sum P(2) = 5.9e-31
Identities = 72/145 (49%), Positives = 92/145 (63%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYAN----QTI 67
GPEF EV+ G GA RVR LFK A+ R PC+V+IDEID+VG KR+ S + ++N QT+
Sbjct: 375 GPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTS-MSGFSNTEEEQTL 433
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
NQLL EMDG + V+VL +TNR D LD AL+RPGR D V + P RREI + +L
Sbjct: 434 NQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHL 493
Query: 128 -G-KIVS-KNIDVDTLARGTTGFTG 149
G K+ + LA T GF+G
Sbjct: 494 KGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 72 (30.4 bits), Expect = 5.9e-31, Sum P(2) = 5.9e-31
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 186 GPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G +KS++ +E + A+HE GHA+V + + +E
Sbjct: 518 GTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTE 552
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 303 (111.7 bits), Expect = 5.9e-31, Sum P(2) = 5.9e-31
Identities = 72/145 (49%), Positives = 92/145 (63%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYAN----QTI 67
GPEF EV+ G GA RVR LFK A+ R PC+V+IDEID+VG KR+ S + ++N QT+
Sbjct: 375 GPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTS-MSGFSNTEEEQTL 433
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
NQLL EMDG + V+VL +TNR D LD AL+RPGR D V + P RREI + +L
Sbjct: 434 NQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHL 493
Query: 128 -G-KIVS-KNIDVDTLARGTTGFTG 149
G K+ + LA T GF+G
Sbjct: 494 KGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 72 (30.4 bits), Expect = 5.9e-31, Sum P(2) = 5.9e-31
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 186 GPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
G +KS++ +E + A+HE GHA+V + + +E
Sbjct: 518 GTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTE 552
>WB|WBGene00021615 [details] [associations]
symbol:Y47C4A.1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000642 InterPro:IPR003959 Pfam:PF00004
Pfam:PF01434 GO:GO:0005524 GO:GO:0006508 GO:GO:0004222
GeneTree:ENSGT00530000063070 HSSP:Q9LCZ4 EMBL:FO080095
EMBL:FO081691 RefSeq:NP_508083.1 RefSeq:NP_872265.1
UniGene:Cel.28965 UniGene:Cel.33161 ProteinModelPortal:G5EGR7
SMR:G5EGR7 EnsemblMetazoa:Y108F1.1 EnsemblMetazoa:Y47C4A.1
GeneID:189973 GeneID:353491 KEGG:cel:CELE_Y108F1.1
KEGG:cel:CELE_Y47C4A.1 CTD:189973 CTD:353491 WormBase:Y108F1.1
WormBase:Y47C4A.1 NextBio:944244 Uniprot:G5EGR7
Length = 238
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 73/160 (45%), Positives = 102/160 (63%)
Query: 65 QTINQLLAEMDGFHQNEG-VVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREIL 123
QT+NQLL EMD G VVVL +TNR D LDKALLRPGRFD +++ P R+++
Sbjct: 57 QTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMF 116
Query: 124 DLYLGKIVSKNIDVD---TLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYAR 180
+LY+ KI + + LA T FTGAD+ N+ N++A+RAA + VT+K +EYA
Sbjct: 117 ELYMRKIKLDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASNKCHVVTIKDMEYAL 176
Query: 181 DKVLMGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
D+VL G E++SR EE + AYHE GHA+V + + ++
Sbjct: 177 DRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTD 216
>WB|WBGene00022429 [details] [associations]
symbol:Y108F1.1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000642 InterPro:IPR003959 Pfam:PF00004
Pfam:PF01434 GO:GO:0005524 GO:GO:0006508 GO:GO:0004222
GeneTree:ENSGT00530000063070 HSSP:Q9LCZ4 EMBL:FO080095
EMBL:FO081691 RefSeq:NP_508083.1 RefSeq:NP_872265.1
UniGene:Cel.28965 UniGene:Cel.33161 ProteinModelPortal:G5EGR7
SMR:G5EGR7 EnsemblMetazoa:Y108F1.1 EnsemblMetazoa:Y47C4A.1
GeneID:189973 GeneID:353491 KEGG:cel:CELE_Y108F1.1
KEGG:cel:CELE_Y47C4A.1 CTD:189973 CTD:353491 WormBase:Y108F1.1
WormBase:Y47C4A.1 NextBio:944244 Uniprot:G5EGR7
Length = 238
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 73/160 (45%), Positives = 102/160 (63%)
Query: 65 QTINQLLAEMDGFHQNEG-VVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREIL 123
QT+NQLL EMD G VVVL +TNR D LDKALLRPGRFD +++ P R+++
Sbjct: 57 QTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMF 116
Query: 124 DLYLGKIVSKNIDVD---TLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYAR 180
+LY+ KI + + LA T FTGAD+ N+ N++A+RAA + VT+K +EYA
Sbjct: 117 ELYMRKIKLDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASNKCHVVTIKDMEYAL 176
Query: 181 DKVLMGPERKSRLPDEETNMITAYHEGGHAVVAFFTKDSE 220
D+VL G E++SR EE + AYHE GHA+V + + ++
Sbjct: 177 DRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTD 216
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 327 (120.2 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 65/130 (50%), Positives = 89/130 (68%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G EF E+ VG GA RVRDLFK A++ P ++F+DEID++G +R N + + T+NQ
Sbjct: 353 GSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGRMGGNDERENTLNQ 412
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF + VVVL TNR D LDKALLRPGRFD +++ PD GR++I ++L K
Sbjct: 413 LLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNK 472
Query: 130 IVSKNI-DVD 138
+ K++ D+D
Sbjct: 473 LKLKSVQDID 482
Score = 157 (60.3 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 40/121 (33%), Positives = 64/121 (52%)
Query: 95 LDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKNIDVDTLARGTTGFTGADLEN 154
L+K L+ + DI+ D++ +++ + + K+ + LA T GF GAD+ N
Sbjct: 470 LNKLKLKSVQ-DIDAKQKDVDFSKYQQLKNEEIEKLAGR------LAALTPGFAGADIAN 522
Query: 155 MVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRLPDEETNMITAYHEGGHAVVAF 214
N+ AL AA + P V + E A ++V+ G E+KSR+ E AYHE GHA+ +
Sbjct: 523 CCNEGALIAAREDAPAVDTYHFEQAIERVIAGLEKKSRILSPEEKKTVAYHEAGHAICGW 582
Query: 215 F 215
F
Sbjct: 583 F 583
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 327 (120.2 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 65/130 (50%), Positives = 89/130 (68%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G EF E+ VG GA RVRDLFK A++ P ++F+DEID++G +R N + + T+NQ
Sbjct: 353 GSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGRMGGNDERENTLNQ 412
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDGF + VVVL TNR D LDKALLRPGRFD +++ PD GR++I ++L K
Sbjct: 413 LLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNK 472
Query: 130 IVSKNI-DVD 138
+ K++ D+D
Sbjct: 473 LKLKSVQDID 482
Score = 157 (60.3 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 40/121 (33%), Positives = 64/121 (52%)
Query: 95 LDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKNIDVDTLARGTTGFTGADLEN 154
L+K L+ + DI+ D++ +++ + + K+ + LA T GF GAD+ N
Sbjct: 470 LNKLKLKSVQ-DIDAKQKDVDFSKYQQLKNEEIEKLAGR------LAALTPGFAGADIAN 522
Query: 155 MVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRLPDEETNMITAYHEGGHAVVAF 214
N+ AL AA + P V + E A ++V+ G E+KSR+ E AYHE GHA+ +
Sbjct: 523 CCNEGALIAAREDAPAVDTYHFEQAIERVIAGLEKKSRILSPEEKKTVAYHEAGHAICGW 582
Query: 215 F 215
F
Sbjct: 583 F 583
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 317 (116.6 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 84/214 (39%), Positives = 119/214 (55%)
Query: 14 EFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQ----TINQ 69
+F E+ VG GA RVR L++ A++ P VVFIDE+D+VG +R ++ Q T+NQ
Sbjct: 478 QFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRER--GLIKGSGGQERDATLNQ 535
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +DGF V+ + +TNR D LD AL+RPGRFD ++ +P P GR EIL ++ K
Sbjct: 536 LLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILQVHARK 595
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP- 187
+++++D +A T G GA+L N+V AA+ DG +T L A G
Sbjct: 596 KPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDGRTELTTDDLLQAAQIEERGML 655
Query: 188 ERKSRLPDEETNMITAYHEGGHAVVAFFTKDSEN 221
+RK R ET A +E AVVA D +N
Sbjct: 656 DRKDR--SLETWRQVAINEAAMAVVAVNFPDMKN 687
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 314 (115.6 bits), Expect = 4.6e-27, P = 4.6e-27
Identities = 75/191 (39%), Positives = 109/191 (57%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSV--LHPYANQTIN 68
+GPE + G+ +RD+F A+ PC+VF+DE+DS+ R SV +++ +N
Sbjct: 562 KGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVN 621
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL EMDG + V V+GATNR + LD AL RPGR D + VP PD GR IL L
Sbjct: 622 QLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLR 681
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAI-DGVP-HVTM-KYLEYARDKVL 184
K VS ++D+ +A T GF+GADL + Q A++ AI + + + K LE A + V
Sbjct: 682 KTPVSDDVDLQYIANKTHGFSGADL-GFITQRAVKIAIKESITADINRTKALEAAGEDVP 740
Query: 185 MGPERKSRLPD 195
M + + +P+
Sbjct: 741 MDEDAEDPVPE 751
Score = 270 (100.1 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 58/154 (37%), Positives = 93/154 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
GPE + G+ +R F+ A+ +P ++FIDEIDS+ KR TN + + ++Q
Sbjct: 289 GPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE---RRVVSQ 345
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL MDG VVV+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++
Sbjct: 346 LLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKN 405
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ + ++D++ +A T G+ G+D+ + ++AA++
Sbjct: 406 MKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQ 439
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 314 (115.6 bits), Expect = 4.7e-27, P = 4.7e-27
Identities = 77/193 (39%), Positives = 105/193 (54%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSV--LHPYANQTIN 68
+GPE + G+ +RD+F A+ PCVVF+DE+DS+ R SV +++ +N
Sbjct: 565 KGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVN 624
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL EMDG + V V+GATNR + LD AL+RPGR D V VP PD R IL L
Sbjct: 625 QLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLR 684
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAID---GVPHVTMKYLEYARDKVL 184
K V+ ++D++ +A T GF+GADL V Q A++ AI K E A + V
Sbjct: 685 KTPVASDVDIEFIASKTHGFSGADL-GFVTQRAVKLAIKESISAEIERQKQREAAGEDVK 743
Query: 185 MGPERKSRLPDEE 197
M E + P E
Sbjct: 744 MEDEEEGEDPVPE 756
Score = 284 (105.0 bits), Expect = 7.8e-24, P = 7.8e-24
Identities = 60/154 (38%), Positives = 96/154 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
GPE + G+ +R F+ A+ +P ++FIDEIDS+ KR TN + + ++Q
Sbjct: 292 GPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE---RRVVSQ 348
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL MDG VVV+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++
Sbjct: 349 LLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILSIHTKN 408
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ + +++D++T+A T G+ G+DL ++ ++AA++
Sbjct: 409 MKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQ 442
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 64/182 (35%), Positives = 110/182 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL-HPYANQTINQL 70
G E + +G+G+R VR+LF A++ P ++F+DEIDS+G+ R + +T+ +L
Sbjct: 210 GSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDSEVQRTMLEL 269
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L ++DGF + + V+ ATNR D LD+ALLRPGR D ++ PPP+ R +IL ++ K+
Sbjct: 270 LNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM 329
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPER 189
+++ I++ +A G +GA+++ + +A + A + HVT + E A KV+M
Sbjct: 330 NLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMKDSE 389
Query: 190 KS 191
K+
Sbjct: 390 KN 391
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 312 (114.9 bits), Expect = 7.4e-27, P = 7.4e-27
Identities = 75/199 (37%), Positives = 110/199 (55%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSV--LHPYANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ +R NS A++ +N
Sbjct: 546 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLN 605
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL EMDG + + V ++GATNR D +D ALLRPGR D + +P PD R I L
Sbjct: 606 QLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLR 665
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
K V+K++DV LA+ T GF+GAD+ + +A A + + K +E R + P
Sbjct: 666 KSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIE----KDIENERRRS-QNP 720
Query: 188 ERKSR-LPDEETNMITAYH 205
E + D+E + I A H
Sbjct: 721 EAMEEDMVDDEVSEIRAAH 739
Score = 275 (101.9 bits), Expect = 7.0e-23, P = 7.0e-23
Identities = 58/154 (37%), Positives = 94/154 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
GPE L G+ +R F+ A+ P ++FIDEIDS+ KR TN + + ++Q
Sbjct: 274 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE---RRIVSQ 330
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL MDG V+V+GATNR + +D AL R GRFD E+++ PD GR E+L ++
Sbjct: 331 LLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKN 390
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ +++++D++ +++ T G+ GADL + +AAL+
Sbjct: 391 MKLAEDVDLERISKDTHGYVGADLAALCTEAALQ 424
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 65/165 (39%), Positives = 101/165 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S L +T+ +
Sbjct: 253 GPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLE 312
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF ++ V V+ ATNR D LD ALLR GR D ++ +P P+ R IL ++ K
Sbjct: 313 LLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRK 372
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPH 170
+ V K+++ + LAR T F GA L+ + +A ALR + H
Sbjct: 373 MNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDH 417
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 65/165 (39%), Positives = 101/165 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S L +T+ +
Sbjct: 253 GPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLE 312
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF ++ V V+ ATNR D LD ALLR GR D ++ +P P+ R IL ++ K
Sbjct: 313 LLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRK 372
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPH 170
+ V K+++ + LAR T F GA L+ + +A ALR + H
Sbjct: 373 MNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDH 417
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 68/187 (36%), Positives = 109/187 (58%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL-- 59
H D G E + +G+G+R VR+LF A++ P ++F+DEIDS+G+ R++S
Sbjct: 202 HTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGS 261
Query: 60 -HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTG 118
+T+ +LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP
Sbjct: 262 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEA 321
Query: 119 RREILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLE 177
R EIL ++ + +++ ID+ ++A G +GA+L+ + +A + A + HVT + E
Sbjct: 322 RAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFE 381
Query: 178 YARDKVL 184
A KVL
Sbjct: 382 LAVAKVL 388
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 61/155 (39%), Positives = 97/155 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
GP+ ++ +G GA+ VRD F+ AK++ PC++FIDEID++G KR +S + +T+ +
Sbjct: 238 GPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 297
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF +E + V+ ATNR D LD AL+R GR D ++ P P R IL ++ K
Sbjct: 298 LLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 357
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+ V +++ + LAR T F GA L+ + +A + A
Sbjct: 358 MNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 392
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 65/183 (35%), Positives = 106/183 (57%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G E + +G+GAR VR+LF A++ P ++F+DEIDS+G+ R +T+ +
Sbjct: 242 GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLE 301
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ P PD R +IL ++ K
Sbjct: 302 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRK 361
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ + + I +D +A G +GA+++++ +A + A + HVT + E A KV+
Sbjct: 362 MNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDS 421
Query: 189 RKS 191
K+
Sbjct: 422 EKN 424
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 308 (113.5 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 71/179 (39%), Positives = 108/179 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGA---KRTNSVLHPYANQTI 67
+GPE VG+ + VR LF A+ P ++F DEIDS+ + K + V +++ +
Sbjct: 790 KGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDGV--SVSDRVM 847
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
+QLL E+DG HQ GV V+ ATNR D +D ALLRPGRFD + V PP+ T R IL ++L
Sbjct: 848 SQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHL 907
Query: 128 GKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVP--HVTMKYLEYARDKV 183
KI S +I + LA T G+TGAD+ + +AA+ A + + ++M++L+ A ++
Sbjct: 908 RKIPCSSDICLKELASITKGYTGADISLICREAAIAALEESLEMEEISMRHLKAAISQI 966
Score = 258 (95.9 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 62/160 (38%), Positives = 91/160 (56%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
GPE +G+ + + ++F++A + TP VVFID++D++ R + + + LL
Sbjct: 451 GPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARKEGG-EELSQRMVATLL 509
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-GKI 130
MDG + +GVVV+ ATNR D ++ AL RPGR D E+ + P T R +IL + L G
Sbjct: 510 NLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMR 569
Query: 131 VS-KNIDVDTLARGTTGFTGADLENMVNQAA---LRAAID 166
S NI V+ LA T GF GADL + +AA LR +D
Sbjct: 570 HSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRHLD 609
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 66/167 (39%), Positives = 99/167 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F AK+ PCV+F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 207 IGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 266
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
++ ATNR D LD ALLRPGR D ++ +P P+ GR EIL ++L K+ + ID
Sbjct: 267 DYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEID 326
Query: 137 VDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKV 183
+ L + T G GADL N+V +A A + +V L A KV
Sbjct: 327 YEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKV 373
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 297 (109.6 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 66/187 (35%), Positives = 106/187 (56%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G E + +G G + VR++FK A++ P +VFIDEID+VG KR + +T+ +
Sbjct: 260 GSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLE 319
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF V V+ ATNR D LD AL+RPGR D ++ +P PD +R I ++ K
Sbjct: 320 LLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSK 379
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S ++D++ +GAD++ + +A L A + +T L ARDK L +
Sbjct: 380 MTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKARDKALF--Q 437
Query: 189 RKSRLPD 195
+K +P+
Sbjct: 438 KKGNIPE 444
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 297 (109.6 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 66/187 (35%), Positives = 106/187 (56%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G E + +G G + VR++FK A++ P +VFIDEID+VG KR + +T+ +
Sbjct: 260 GSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLE 319
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF V V+ ATNR D LD AL+RPGR D ++ +P PD +R I ++ K
Sbjct: 320 LLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSK 379
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S ++D++ +GAD++ + +A L A + +T L ARDK L +
Sbjct: 380 MTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKARDKALF--Q 437
Query: 189 RKSRLPD 195
+K +P+
Sbjct: 438 KKGNIPE 444
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 67/193 (34%), Positives = 110/193 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVL 59
H D G E + +G+GAR VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 212 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 271
Query: 60 HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP+ R
Sbjct: 272 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 331
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
+IL ++ K+ +++ I++ +A G +GA+++ + +A + A + HVT + E
Sbjct: 332 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 391
Query: 179 ARDKVLMGPERKS 191
A KV+ K+
Sbjct: 392 AVAKVMQKDSEKN 404
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 67/193 (34%), Positives = 110/193 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVL 59
H D G E + +G+GAR VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 60 HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP+ R
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
+IL ++ K+ +++ I++ +A G +GA+++ + +A + A + HVT + E
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 179 ARDKVLMGPERKS 191
A KV+ K+
Sbjct: 386 AVAKVMQKDSEKN 398
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 67/193 (34%), Positives = 110/193 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVL 59
H D G E + +G+GAR VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 60 HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP+ R
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
+IL ++ K+ +++ I++ +A G +GA+++ + +A + A + HVT + E
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 179 ARDKVLMGPERKS 191
A KV+ K+
Sbjct: 386 AVAKVMQKDSEKN 398
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 67/193 (34%), Positives = 110/193 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVL 59
H D G E + +G+GAR VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 60 HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP+ R
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
+IL ++ K+ +++ I++ +A G +GA+++ + +A + A + HVT + E
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 179 ARDKVLMGPERKS 191
A KV+ K+
Sbjct: 386 AVAKVMQKDSEKN 398
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 67/193 (34%), Positives = 110/193 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVL 59
H D G E + +G+GAR VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 60 HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP+ R
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
+IL ++ K+ +++ I++ +A G +GA+++ + +A + A + HVT + E
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 179 ARDKVLMGPERKS 191
A KV+ K+
Sbjct: 386 AVAKVMQKDSEKN 398
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 67/193 (34%), Positives = 110/193 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVL 59
H D G E + +G+GAR VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 214 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 273
Query: 60 HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP+ R
Sbjct: 274 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 333
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
+IL ++ K+ +++ I++ +A G +GA+++ + +A + A + HVT + E
Sbjct: 334 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 393
Query: 179 ARDKVLMGPERKS 191
A KV+ K+
Sbjct: 394 AVAKVMQKDSEKN 406
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 67/193 (34%), Positives = 110/193 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVL 59
H D G E + +G+GAR VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 214 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 273
Query: 60 HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP+ R
Sbjct: 274 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 333
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
+IL ++ K+ +++ I++ +A G +GA+++ + +A + A + HVT + E
Sbjct: 334 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 393
Query: 179 ARDKVLMGPERKS 191
A KV+ K+
Sbjct: 394 AVAKVMQKDSEKN 406
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 67/193 (34%), Positives = 110/193 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVL 59
H D G E + +G+GAR VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 60 HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP+ R
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
+IL ++ K+ +++ I++ +A G +GA+++ + +A + A + HVT + E
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 179 ARDKVLMGPERKS 191
A KV+ K+
Sbjct: 386 AVAKVMQKDSEKN 398
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 67/193 (34%), Positives = 110/193 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVL 59
H D G E + +G+GAR VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 60 HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP+ R
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
+IL ++ K+ +++ I++ +A G +GA+++ + +A + A + HVT + E
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 179 ARDKVLMGPERKS 191
A KV+ K+
Sbjct: 386 AVAKVMQKDSEKN 398
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 65/186 (34%), Positives = 107/186 (57%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL-- 59
H D G E + +G+G+R VR+LF A++ P ++F+DEIDS+G+ R
Sbjct: 205 HTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGG 264
Query: 60 HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF ++ + ++ ATNR D LD ALLRPGR D ++ PPP R
Sbjct: 265 DSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAAR 324
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
EIL ++ K+ +++ I++ +A G +GAD++ + +A + A + HVT + E
Sbjct: 325 AEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFEL 384
Query: 179 ARDKVL 184
A KV+
Sbjct: 385 AVGKVM 390
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 67/193 (34%), Positives = 110/193 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVL 59
H D G E + +G+GAR VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 60 HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP+ R
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
+IL ++ K+ +++ I++ +A G +GA+++ + +A + A + HVT + E
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 179 ARDKVLMGPERKS 191
A KV+ K+
Sbjct: 386 AVAKVMQKDSEKN 398
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 305 (112.4 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 67/160 (41%), Positives = 95/160 (59%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYA-NQTINQ 69
+GPE + G+ VRD+F A+ PCVVF+DE+DS+ R S ++ +NQ
Sbjct: 563 KGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQ 622
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDG + + V V+GATNR D +D AL+RPGR D + VP PD R IL L
Sbjct: 623 LLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRH 682
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGV 168
V++++D+ +A+ T GF+GADLE +V +A A D +
Sbjct: 683 TPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSI 722
Score = 276 (102.2 bits), Expect = 5.5e-23, P = 5.5e-23
Identities = 60/154 (38%), Positives = 95/154 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
GPE + G+ +R F+ A+ +P ++FIDEIDS+ KR TN + + ++Q
Sbjct: 291 GPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE---RRVVSQ 347
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL MDG VVV+ ATNR + +D AL R GRFD EV+V PD TGR EIL ++
Sbjct: 348 LLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKN 407
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ ++ ++D++ +A T G+ G+DL ++ ++AA++
Sbjct: 408 MKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQ 441
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 60/155 (38%), Positives = 98/155 (63%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
GP+ ++ +G GA+ VRD F AK+++PC++FIDEID++G KR +S + +T+ +
Sbjct: 237 GPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF ++ + V+ ATNR D LD AL+R GR D ++ P P R IL ++ K
Sbjct: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRK 356
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+ V+ +++ + LAR T F GA L+ + +A + A
Sbjct: 357 MNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLA 391
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 304 (112.1 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 69/188 (36%), Positives = 104/188 (55%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R +V A++ IN
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVIN 602
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 603 QILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLR 662
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
K +SK++D+D LA+ T GF+GADL + +A A + + + + E + M
Sbjct: 663 KSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEV 722
Query: 188 ERKSRLPD 195
E +P+
Sbjct: 723 EEDDPVPE 730
Score = 276 (102.2 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 61/154 (39%), Positives = 93/154 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 271 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 328
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 329 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 388
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++D++ +A T G GADL + ++AAL+A
Sbjct: 389 KLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 36 (17.7 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP++T
Sbjct: 460 NPSALRETVVEVPNIT 475
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 63/186 (33%), Positives = 107/186 (57%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLH- 60
H D G E + +G+G+R VR+LF A++ P ++F+DEIDS+G+ R +S
Sbjct: 189 HTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGSG 248
Query: 61 -PYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + ++ ATNR D LD ALLRPGR D ++ PPP R
Sbjct: 249 DSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEAR 308
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
+IL ++ + +++ I++ +A G +GA+L+ + +A + A + HVT + +
Sbjct: 309 ADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDFDL 368
Query: 179 ARDKVL 184
A K+L
Sbjct: 369 ATAKIL 374
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 65/183 (35%), Positives = 108/183 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRT--NSVLHPYANQTINQ 69
G E + +G+GAR VR+LF A++ P ++F+DEIDS+G+ R +S +T+ +
Sbjct: 226 GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLE 285
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ P PD R +IL ++ K
Sbjct: 286 LLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRK 345
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ + + I++ +A G +GA+++++ +A + A + HVT + E A KV+
Sbjct: 346 MNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDS 405
Query: 189 RKS 191
K+
Sbjct: 406 EKN 408
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 303 (111.7 bits), Expect = 7.0e-26, P = 7.0e-26
Identities = 74/198 (37%), Positives = 110/198 (55%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSV--LHPYANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ +R NSV A++ +N
Sbjct: 547 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLN 606
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL EMDG + + V ++GATNR D +D ALLRPGR D + +P PD R +I L
Sbjct: 607 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLR 666
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
K V+K++D+ LA+ T GF+GAD+ + ++ A + + K +E R + P
Sbjct: 667 KSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIE----KDIEKERKRA-ESP 721
Query: 188 ERKSRLPDEETNMITAYH 205
E +EE I A H
Sbjct: 722 EAMEE-DEEEIAEIKAGH 738
Score = 273 (101.2 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 58/153 (37%), Positives = 93/153 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDEIDS+ KR + H + I +QL
Sbjct: 275 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT--HGEVERRIVSQL 332
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG V+V+GATNR + +D AL R GRFD E+++ PD GR E+L ++ +
Sbjct: 333 LTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM 392
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+++++D++ +++ T G+ GADL + +AAL+
Sbjct: 393 KLAEDVDLERVSKDTHGYVGADLAALCTEAALQ 425
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 298 (110.0 bits), Expect = 7.8e-26, P = 7.8e-26
Identities = 66/162 (40%), Positives = 98/162 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 275 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 334
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 335 QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLR 394
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++D+D LA+ T GF+GADL + +A A+R +I+
Sbjct: 395 KSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE 436
Score = 272 (100.8 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 60/154 (38%), Positives = 92/154 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 60
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 61 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 120
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++D++ + T G GADL + ++AAL+A
Sbjct: 121 KLADDVDLEQVGNETHGHVGADLAALCSEAALQA 154
Score = 36 (17.7 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 192 NPSALRETVVEVPQVT 207
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 64/183 (34%), Positives = 108/183 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G E + +G+G+R VR+LF A++ P ++F+DEIDS+G+ R S +T+ +
Sbjct: 215 GSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLE 274
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP+ R +IL ++ K
Sbjct: 275 LLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 334
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +++ I++ +A G +GA+++ + +A + A + HVT + E A KV+
Sbjct: 335 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 394
Query: 189 RKS 191
K+
Sbjct: 395 EKN 397
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 302 (111.4 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 72/200 (36%), Positives = 109/200 (54%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSV--LHPYANQTIN 68
+GPE + G+ VRD+F A+ PCV+F DE+DS+ R SV A++ IN
Sbjct: 548 KGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVIN 607
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + + V ++GATNR D +D A+LRPGR D + +P PD R +I L
Sbjct: 608 QVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLR 667
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
K +S ++D++ LA+ T GF+GADL + +A A + + + E +D+ G
Sbjct: 668 KTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKE-RQDRSARGE 726
Query: 188 E-RKSRLPDEETNMITAYHE 206
E + L D + A+ E
Sbjct: 727 ELMEDELADPVPEITRAHFE 746
Score = 252 (93.8 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 56/153 (36%), Positives = 90/153 (58%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE + G+ +R F + +P ++FIDEID++ KR + H + I +QL
Sbjct: 276 GPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKA--HGEVEKRIVSQL 333
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG VVV+ ATNR + +D AL R GRFD E+++ PD GR EIL ++ +
Sbjct: 334 LTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNM 393
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ +++D++ +A GF GADL ++ ++AA++
Sbjct: 394 KLGEDVDLEQVANECHGFVGADLASLCSEAAIQ 426
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 302 (111.4 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 72/200 (36%), Positives = 109/200 (54%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSV--LHPYANQTIN 68
+GPE + G+ VRD+F A+ PCV+F DE+DS+ R SV A++ IN
Sbjct: 548 KGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVIN 607
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + + V ++GATNR D +D A+LRPGR D + +P PD R +I L
Sbjct: 608 QVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLR 667
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
K +S ++D++ LA+ T GF+GADL + +A A + + + E +D+ G
Sbjct: 668 KTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKE-RQDRSARGE 726
Query: 188 E-RKSRLPDEETNMITAYHE 206
E + L D + A+ E
Sbjct: 727 ELMEDELADPVPEITRAHFE 746
Score = 252 (93.8 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 56/153 (36%), Positives = 90/153 (58%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE + G+ +R F + +P ++FIDEID++ KR + H + I +QL
Sbjct: 276 GPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKA--HGEVEKRIVSQL 333
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG VVV+ ATNR + +D AL R GRFD E+++ PD GR EIL ++ +
Sbjct: 334 LTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNM 393
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ +++D++ +A GF GADL ++ ++AA++
Sbjct: 394 KLGEDVDLEQVANECHGFVGADLASLCSEAAIQ 426
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 302 (111.4 bits), Expect = 9.8e-26, P = 9.8e-26
Identities = 82/222 (36%), Positives = 120/222 (54%)
Query: 10 AQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLH---PYANQT 66
A G +F E+ VG A RV+DLF +++ P ++FIDEID++G+KR + Q
Sbjct: 380 ANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQG 439
Query: 67 INQLLAEMDGFHQNEG-VVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDL 125
+ Q+L EMDGF V+V+GATNR D LD ALLR GRFD + V P GR IL +
Sbjct: 440 LLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKV 499
Query: 126 YLGKIVSKNID-----VDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYA- 179
+ ++ D + +A T FTGA+L+N++N+A + A + ++ + L A
Sbjct: 500 HARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNEAGILTARKDLDYIGREELLEAL 559
Query: 180 -RDKVLM--GPERKSRLPDEETNMITAYHEGGHAVVAFFTKD 218
R K G E + +P EE + AY E AV+A + D
Sbjct: 560 KRQKGTFETGQEDSTEVP-EELKLRLAYREAAVAVLACYLPD 600
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 301 (111.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 67/162 (41%), Positives = 98/162 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 603 QILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLR 662
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++DVD LA+ T GF+GADL + +A A+R +I+
Sbjct: 663 KSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
Score = 279 (103.3 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 62/154 (40%), Positives = 93/154 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 271 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 328
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 329 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNM 388
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+S ++D++ +A T G GADL + ++AAL+A
Sbjct: 389 KLSDDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 36 (17.7 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 460 NPSALRETVVEVPQVT 475
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 293 (108.2 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 66/192 (34%), Positives = 110/192 (57%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAK-RTNSVLH 60
H D G E + +G+GAR VR+LF A++ P ++F+DEIDS+G++ S
Sbjct: 201 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGGD 260
Query: 61 PYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRR 120
+T+ +LL ++DGF + + V+ ATNR D LD ALLRPGR D ++ PPP+ R
Sbjct: 261 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 320
Query: 121 EILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYA 179
+IL ++ K+ +++ I++ +A G +GA+++ + +A + A + HVT + E A
Sbjct: 321 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 380
Query: 180 RDKVLMGPERKS 191
KV+ K+
Sbjct: 381 VAKVMQKDSEKN 392
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 303 (111.7 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 62/154 (40%), Positives = 96/154 (62%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQL 70
+GPE VG+ ++VR++F A PC++F DEIDS+ R+N+ +++ +NQL
Sbjct: 742 KGPEILNKYVGESEKKVREIFSYASVYKPCLIFFDEIDSICINRSNNKSVSASDRVVNQL 801
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILD-LYLGK 129
L+EMDG Q EGV ++ TNR D +DKALLR GRFD + + P Y GR +IL L
Sbjct: 802 LSEMDGLSQREGVYIIATTNRPDIIDKALLRSGRFDQLIYISLPKYQGRVDILKKLSKNM 861
Query: 130 IVSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+ KN+ + +++ T G++GADL ++ ++A A
Sbjct: 862 PIDKNVRFEEISKLTRGYSGADLYGVLRESAFIA 895
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 66/184 (35%), Positives = 111/184 (60%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F AK+ PC++F+DEID++G +R + + +T+ +LL +DGF
Sbjct: 212 IGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGF 271
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSK-NID 136
+ V ++ ATNR D LD AL+RPGR D ++ +P P+ T R EIL ++ K+ +ID
Sbjct: 272 EELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDID 331
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+++ R GF GADL N+ +A A+RA D V + + + AR K+ G + + ++
Sbjct: 332 YESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYV--IEEDFYKAAR-KISEGKKLEGKI 388
Query: 194 PDEE 197
E+
Sbjct: 389 EYEK 392
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 66/184 (35%), Positives = 111/184 (60%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F AK+ PC++F+DEID++G +R + + +T+ +LL +DGF
Sbjct: 212 IGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGF 271
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSK-NID 136
+ V ++ ATNR D LD AL+RPGR D ++ +P P+ T R EIL ++ K+ +ID
Sbjct: 272 EELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDID 331
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+++ R GF GADL N+ +A A+RA D V + + + AR K+ G + + ++
Sbjct: 332 YESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYV--IEEDFYKAAR-KISEGKKLEGKI 388
Query: 194 PDEE 197
E+
Sbjct: 389 EYEK 392
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 300 (110.7 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 68/188 (36%), Positives = 104/188 (55%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 603 QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLR 662
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGP 187
K V+K++D+D LA+ T GF+GADL + +A A + + + + E + M
Sbjct: 663 KSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEV 722
Query: 188 ERKSRLPD 195
E +P+
Sbjct: 723 EEDDPVPE 730
Score = 279 (103.3 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 62/154 (40%), Positives = 93/154 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 271 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 328
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 329 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNM 388
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+S ++D++ +A T G GADL + ++AAL+A
Sbjct: 389 KLSDDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 36 (17.7 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 460 NPSALRETVVEVPQVT 475
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 298 (110.0 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 74/181 (40%), Positives = 107/181 (59%)
Query: 9 HA-QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI 67
HA +G E + VG + VR+LF+ A+D P +VF+DE+D++ +R S +++ +
Sbjct: 527 HAVKGSELMDKWVGSSEKAVRELFRRARDSAPSLVFLDELDALAPRRGQSFDSGVSDRVV 586
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
LL E+DG VV+LGATNR D +D ALLRPGR + V V PPD RREIL
Sbjct: 587 AALLTELDGIDPLRDVVMLGATNRPDLIDPALLRPGRLERLVFVEPPDAAARREILRT-A 645
Query: 128 GKIV--SKNIDVDTLARGTTGFTGADLENMVNQAAL---RAAIDGVPHVTMKYLEYARDK 182
GK + S ++D+D +A G G++ AD ++ +AAL R +ID +VT L AR+
Sbjct: 646 GKSIPLSSDVDLDEVAAGLDGYSAADCVALLREAALTAMRRSIDAA-NVTAADLATARET 704
Query: 183 V 183
V
Sbjct: 705 V 705
Score = 156 (60.0 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 45/153 (29%), Positives = 74/153 (48%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
GPE + G + V +A + V+ I + D++ L A + +L
Sbjct: 278 GPEIGALAAGDRVKAVASAVQAVRHEGG-VLLITDADAL--------LPAAAEPVASLIL 328
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIV 131
+E+ GVV++ + R D LD L P D E+ +P PD R+ +L+ L +
Sbjct: 329 SELRTAVATAGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSLLEALLNPVP 388
Query: 132 SKNIDVDTLARGTTGFTGADLENMVNQAALRAA 164
+ ++++D +A T GF ADL +V +AALRAA
Sbjct: 389 TGDLNLDEIASRTPGFVVADLAALVREAALRAA 421
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 298 (110.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 66/162 (40%), Positives = 98/162 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 541 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 600
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 601 QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLR 660
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++D+D LA+ T GF+GADL + +A A+R +I+
Sbjct: 661 KSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE 702
Score = 212 (79.7 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 53/153 (34%), Positives = 81/153 (52%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
GPE L G+G R A D + +T+ + + ++QLL
Sbjct: 271 GPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFPSPQTHGEVE---RRIVSQLL 327
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI- 130
MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 328 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMK 387
Query: 131 VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++D++ +A T G GADL + ++AAL+A
Sbjct: 388 LADDVDLEQVANETHGHVGADLAALCSEAALQA 420
Score = 36 (17.7 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 458 NPSALRETVVEVPQVT 473
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 298 (110.0 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 66/162 (40%), Positives = 98/162 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 547 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 606
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 607 QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLR 666
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++D+D LA+ T GF+GADL + +A A+R +I+
Sbjct: 667 KSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE 708
Score = 257 (95.5 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 58/156 (37%), Positives = 91/156 (58%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRT--NSVLHPYANQTI-N 68
GPE L G+ +R F+ + P ++FIDE+D++ + + H + I +
Sbjct: 271 GPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQTHGEVERRIVS 330
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++
Sbjct: 331 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTK 390
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+ ++ ++D++ +A T G GADL + ++AAL+A
Sbjct: 391 NMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 426
Score = 36 (17.7 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 464 NPSALRETVVEVPQVT 479
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 298 (110.0 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 72/205 (35%), Positives = 113/205 (55%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR-TNSVLHPYANQTINQ 69
+GPE VG+ R VR++F+ A+ P ++F DE+D++ +R ++S A++ + Q
Sbjct: 693 KGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQ 752
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDG Q + V VL ATNR D +DKAL+RPGR D + VP PD RREIL+L
Sbjct: 753 LLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHS 812
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S +D+D L T ++GA++ + +AAL A + + + + + ++ P
Sbjct: 813 MPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKADCIMKRHFTQALSIVTP- 871
Query: 189 RKSRLPDEETNMITAYHE--GGHAV 211
R+P+ Y E G H V
Sbjct: 872 ---RIPESLRRFYEDYQEKSGLHTV 893
Score = 231 (86.4 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 59/157 (37%), Positives = 85/157 (54%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
GPE G+ R+R +F A R P ++FIDE+D++ KR + + + LL
Sbjct: 420 GPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSE-VEKRVVASLL 478
Query: 72 AEMDGFHQ--NEG-VVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
MDG +EG V+VLGATNR LD AL RPGRFD E+ + P+ R +IL L
Sbjct: 479 TLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLR 538
Query: 129 KI--VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ + ++ LA G+ GADL+ + N+A L A
Sbjct: 539 RVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHA 575
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 297 (109.6 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 67/158 (42%), Positives = 98/158 (62%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYA--NQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+G +R +S+ ++ +N
Sbjct: 546 KGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMN 605
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL E+DG + + +GATNR + LD+ALLRPGR D + +P PD R IL L
Sbjct: 606 QLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILR 665
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAI 165
K V++N+ +D LA+ T GF+GADL + +AA RAAI
Sbjct: 666 KCPVAENVPIDFLAQKTAGFSGADLAELCQRAA-RAAI 702
Score = 272 (100.8 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 61/153 (39%), Positives = 91/153 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
GPE + G+ +R F+ A+ +P ++FIDEIDS+ KR TN + + ++Q
Sbjct: 274 GPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE---RRVVSQ 330
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL MDG VVV+ ATNR++ +D AL R GRFD E+++ PD GR EIL ++
Sbjct: 331 LLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILRIHTKN 390
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAAL 161
+ +S ++ ++ LA T GF GADL + +AAL
Sbjct: 391 MKLSPDVKLEELASNTHGFVGADLAQLCTEAAL 423
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 297 (109.6 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 67/158 (42%), Positives = 98/158 (62%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYA--NQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+G +R +S+ ++ +N
Sbjct: 546 KGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMN 605
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL E+DG + + +GATNR + LD+ALLRPGR D + +P PD R IL L
Sbjct: 606 QLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILR 665
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAI 165
K V++N+ +D LA+ T GF+GADL + +AA RAAI
Sbjct: 666 KCPVAENVPIDFLAQKTAGFSGADLAELCQRAA-RAAI 702
Score = 272 (100.8 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 61/153 (39%), Positives = 91/153 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
GPE + G+ +R F+ A+ +P ++FIDEIDS+ KR TN + + ++Q
Sbjct: 274 GPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE---RRVVSQ 330
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL MDG VVV+ ATNR++ +D AL R GRFD E+++ PD GR EIL ++
Sbjct: 331 LLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILRIHTKN 390
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAAL 161
+ +S ++ ++ LA T GF GADL + +AAL
Sbjct: 391 MKLSPDVKLEELASNTHGFVGADLAQLCTEAAL 423
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 288 (106.4 bits), Expect = 3.5e-25, P = 3.5e-25
Identities = 66/188 (35%), Positives = 107/188 (56%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
G E + +G G + VR+LF+ A++ P +VFIDEID+VG KR +NS +T+ +
Sbjct: 255 GSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLE 314
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF V VL ATNR + LD AL+RPGR D ++ P PD +R I ++ +
Sbjct: 315 LLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSR 374
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ + K ++++ +GAD++ M +A L A + VTM+ + +++ VL
Sbjct: 375 MTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLY--R 432
Query: 189 RKSRLPDE 196
+K P+E
Sbjct: 433 KKEGAPEE 440
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 64/170 (37%), Positives = 101/170 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 199 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 258
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 259 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 318
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ VS +++ + LAR T F GA + + +A + A G +T + Y+E
Sbjct: 319 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 368
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 64/170 (37%), Positives = 101/170 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 203 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 262
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 263 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 322
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ VS +++ + LAR T F GA + + +A + A G +T + Y+E
Sbjct: 323 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 372
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 64/170 (37%), Positives = 101/170 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 211 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 270
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 271 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 330
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ VS +++ + LAR T F GA + + +A + A G +T + Y+E
Sbjct: 331 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 380
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 68/194 (35%), Positives = 109/194 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL-- 59
H D G E + +G+G+R VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 218 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 277
Query: 60 -HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTG 118
+T+ +LL ++DGF + + VL ATNR D LD+ALLRPGR D ++ P P+
Sbjct: 278 GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 337
Query: 119 RREILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLE 177
R +IL ++ K+ + + ID+ +A G +GA+L+ + +A + A + HVT + E
Sbjct: 338 RFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFE 397
Query: 178 YARDKVLMGPERKS 191
A KV+ K+
Sbjct: 398 MAVAKVMKKDTEKN 411
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 68/194 (35%), Positives = 109/194 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL-- 59
H D G E + +G+G+R VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 218 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 277
Query: 60 -HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTG 118
+T+ +LL ++DGF + + VL ATNR D LD+ALLRPGR D ++ P P+
Sbjct: 278 GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 337
Query: 119 RREILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLE 177
R +IL ++ K+ + + ID+ +A G +GA+L+ + +A + A + HVT + E
Sbjct: 338 RFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFE 397
Query: 178 YARDKVLMGPERKS 191
A KV+ K+
Sbjct: 398 MAVAKVMKKDTEKN 411
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 296 (109.3 bits), Expect = 3.9e-25, P = 3.9e-25
Identities = 70/193 (36%), Positives = 109/193 (56%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP---YANQTI 67
+GPE + G+ VRD+F A+ PCV+F DE+DS+ R +++ I
Sbjct: 549 KGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVI 608
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
NQ+L EMDG + + V ++GATNR D +D A+LRPGR D + +P PD R +IL L
Sbjct: 609 NQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASL 668
Query: 128 GKI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLE-YARDK 182
K +SK++D+ LA+ T GF+GADL + +A A+R +I+ + + + AR +
Sbjct: 669 RKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGE 728
Query: 183 VLMGPERKSRLPD 195
LM + +P+
Sbjct: 729 ELMEDDAVDPVPE 741
Score = 252 (93.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 56/154 (36%), Positives = 91/154 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
GPE + G+ +R F+ + P ++FIDEID++ KR TN + + ++Q
Sbjct: 277 GPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVE---RRIVSQ 333
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL MDG +VV+ ATNR + +D AL R GRFD E+++ PD GR EIL ++
Sbjct: 334 LLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKN 393
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ ++ ++D++ +A GF GADL ++ ++AAL+
Sbjct: 394 MKLADDVDLEQIANECHGFVGADLASLCSEAALQ 427
Score = 37 (18.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 164 AIDGVPHVTMKYLEYA 179
A+D VP +T + E A
Sbjct: 735 AVDPVPEITRAHFEEA 750
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 296 (109.3 bits), Expect = 3.9e-25, P = 3.9e-25
Identities = 70/193 (36%), Positives = 109/193 (56%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP---YANQTI 67
+GPE + G+ VRD+F A+ PCV+F DE+DS+ R +++ I
Sbjct: 549 KGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVI 608
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
NQ+L EMDG + + V ++GATNR D +D A+LRPGR D + +P PD R +IL L
Sbjct: 609 NQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASL 668
Query: 128 GKI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLE-YARDK 182
K +SK++D+ LA+ T GF+GADL + +A A+R +I+ + + + AR +
Sbjct: 669 RKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGE 728
Query: 183 VLMGPERKSRLPD 195
LM + +P+
Sbjct: 729 ELMEDDAVDPVPE 741
Score = 252 (93.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 56/154 (36%), Positives = 91/154 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
GPE + G+ +R F+ + P ++FIDEID++ KR TN + + ++Q
Sbjct: 277 GPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVE---RRIVSQ 333
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL MDG +VV+ ATNR + +D AL R GRFD E+++ PD GR EIL ++
Sbjct: 334 LLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKN 393
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ ++ ++D++ +A GF GADL ++ ++AAL+
Sbjct: 394 MKLADDVDLEQIANECHGFVGADLASLCSEAALQ 427
Score = 37 (18.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 164 AIDGVPHVTMKYLEYA 179
A+D VP +T + E A
Sbjct: 735 AVDPVPEITRAHFEEA 750
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 297 (109.6 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 65/156 (41%), Positives = 97/156 (62%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL-HPYANQTINQ 69
+GPE + VG+ R VR F+ A++ PCV+F DE DS+ KR++ + + +NQ
Sbjct: 728 KGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSGTRIVNQ 787
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-- 127
LL EMDG + +GV +L ATNR D +D A+LRPGR D + V P+ + R EIL
Sbjct: 788 LLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKN 847
Query: 128 GK--IVSKNIDVDTLARGTTGFTGADLENMVNQAAL 161
GK +++ ++D+D +A T G+TGADL +V QA++
Sbjct: 848 GKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASM 883
Score = 234 (87.4 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 56/144 (38%), Positives = 81/144 (56%)
Query: 21 GQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLLAEMDGFHQN 80
G+ R+R++F A +PCV+FIDEID++G R + ++QL++ +D N
Sbjct: 326 GESEERIREVFDQAIGYSPCVLFIDEIDAIGGNR-QWASKDMERRIVSQLISSLDNLKAN 384
Query: 81 E---GVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL-GKIVSKNID 136
E VVV+ AT R D LD L R GRFD E+ + P RREIL + G V ++
Sbjct: 385 EFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRIQCEGLSVDPKLN 444
Query: 137 VDTLARGTTGFTGADLENMVNQAA 160
D +A T G+ GADL +V++AA
Sbjct: 445 YDKIAELTPGYVGADLMALVSRAA 468
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 286 (105.7 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 59/155 (38%), Positives = 97/155 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 244 GPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 303
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N+ + V+ ATNR D LD ALLR GR D ++ +P P+ R I+ ++ K
Sbjct: 304 LLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRK 363
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+ V+K+++ + LAR T F GA + + +A + A
Sbjct: 364 MNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIA 398
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 286 (105.7 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 59/155 (38%), Positives = 97/155 (62%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 244 GPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 303
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N+ + V+ ATNR D LD ALLR GR D ++ +P P+ R I+ ++ K
Sbjct: 304 LLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRK 363
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+ V+K+++ + LAR T F GA + + +A + A
Sbjct: 364 MNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIA 398
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 298 (110.0 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 60/162 (37%), Positives = 99/162 (61%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQL 70
+GPE + G+ VRDLF A+ +PC++F DEIDS+ +R ++ + +++ INQ+
Sbjct: 1000 KGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNNDASDRVINQI 1059
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L E+DG ++ + + ++ ATNR D LDKAL RPGR D + + PD R I L
Sbjct: 1060 LTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNT 1119
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHV 171
+++++D+ +A+ T GF+GAD+ N+ Q+A+ AI H+
Sbjct: 1120 PLNEDVDIHDMAKRTEGFSGADITNLC-QSAVNEAIKETIHL 1160
Score = 298 (110.0 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 70/207 (33%), Positives = 115/207 (55%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
GPE +G+ +++R +FK A ++TPC++FIDEIDS+ KR+ S + + ++QLL
Sbjct: 594 GPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSN-NELEKRVVSQLL 652
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI- 130
MDG +N V+VL ATNR + +D AL R GRFD E+ +P PD GR EIL K+
Sbjct: 653 TLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMK 712
Query: 131 VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK---YLEYAR-----DK 182
+ ++++ +A+ G+ GADL + +AA++ + + + + ++E+ + DK
Sbjct: 713 LDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDEEDFIEFMKISVDEDK 772
Query: 183 VLMGPERKSRLPDEETNMITAYHEGGH 209
MG E +N I E +
Sbjct: 773 KNMGNEPYGSSHTNNSNYINHLTESSN 799
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 298 (110.0 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 60/162 (37%), Positives = 99/162 (61%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQL 70
+GPE + G+ VRDLF A+ +PC++F DEIDS+ +R ++ + +++ INQ+
Sbjct: 1000 KGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNNDASDRVINQI 1059
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L E+DG ++ + + ++ ATNR D LDKAL RPGR D + + PD R I L
Sbjct: 1060 LTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNT 1119
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHV 171
+++++D+ +A+ T GF+GAD+ N+ Q+A+ AI H+
Sbjct: 1120 PLNEDVDIHDMAKRTEGFSGADITNLC-QSAVNEAIKETIHL 1160
Score = 298 (110.0 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 70/207 (33%), Positives = 115/207 (55%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
GPE +G+ +++R +FK A ++TPC++FIDEIDS+ KR+ S + + ++QLL
Sbjct: 594 GPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSN-NELEKRVVSQLL 652
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI- 130
MDG +N V+VL ATNR + +D AL R GRFD E+ +P PD GR EIL K+
Sbjct: 653 TLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMK 712
Query: 131 VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK---YLEYAR-----DK 182
+ ++++ +A+ G+ GADL + +AA++ + + + + ++E+ + DK
Sbjct: 713 LDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDEEDFIEFMKISVDEDK 772
Query: 183 VLMGPERKSRLPDEETNMITAYHEGGH 209
MG E +N I E +
Sbjct: 773 KNMGNEPYGSSHTNNSNYINHLTESSN 799
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 295 (108.9 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 66/162 (40%), Positives = 96/162 (59%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSV--LHPYANQTIN 68
+GPE + G+ VRD+F A+ PCV+F DE+DS+ R +V A++ IN
Sbjct: 540 KGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVIN 599
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 600 QILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLR 659
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K ++K +D+ +A+ T GF+GADL + +A A+R AI+
Sbjct: 660 KSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIE 701
Score = 263 (97.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 56/153 (36%), Positives = 94/153 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ +P ++FIDEID++ KR + H + I +QL
Sbjct: 268 GPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKT--HGEVERRIVSQL 325
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG ++ ++V+ ATNR + +D AL R GRFD E+++ PD TGR E+L ++ +
Sbjct: 326 LTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNM 385
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ ++D++ +A + G GADL ++ ++AAL+
Sbjct: 386 KLHDDVDLEQIAAESHGHVGADLASLCSEAALQ 418
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 295 (108.9 bits), Expect = 5.3e-25, P = 5.3e-25
Identities = 64/161 (39%), Positives = 95/161 (59%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSV--LHPYANQTIN 68
+GPE + G+ +RD+F A+ P VVF+DE+DS+ R S+ +++ +N
Sbjct: 553 KGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVN 612
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL EMDG + + V V+GATNR D +D A+LRPGR D + VP PD R IL+ L
Sbjct: 613 QLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLR 672
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGV 168
K + +++ +A+ T GF+GADL +V +AA A D +
Sbjct: 673 KTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSI 713
Score = 277 (102.6 bits), Expect = 4.5e-23, P = 4.5e-23
Identities = 59/154 (38%), Positives = 94/154 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
GPE + G+ +R F+ A+ P ++FIDEIDS+ KR TN + + ++Q
Sbjct: 281 GPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVE---RRVVSQ 337
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL MDG VVV+ ATNR + +D AL R GRFD EV++ PD TGR E+L ++
Sbjct: 338 LLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKN 397
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ ++ ++D++ LA T G+ GAD+ ++ ++AA++
Sbjct: 398 MKLADDVDLEALAAETHGYVGADIASLCSEAAMQ 431
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 286 (105.7 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 64/170 (37%), Positives = 101/170 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 253 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 312
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 313 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 372
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ VS +++ + LAR T F GA + + +A + A G +T + Y+E
Sbjct: 373 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 422
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 286 (105.7 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 64/170 (37%), Positives = 101/170 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 253 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 312
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 313 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 372
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ VS +++ + LAR T F GA + + +A + A G +T + Y+E
Sbjct: 373 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 422
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 286 (105.7 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 64/170 (37%), Positives = 101/170 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 253 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 312
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 313 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 372
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ VS +++ + LAR T F GA + + +A + A G +T + Y+E
Sbjct: 373 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 422
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 286 (105.7 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 64/170 (37%), Positives = 101/170 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 256 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 315
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 316 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 375
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ VS +++ + LAR T F GA + + +A + A G +T + Y+E
Sbjct: 376 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 425
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 286 (105.7 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 64/170 (37%), Positives = 101/170 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 256 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 315
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 316 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 375
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ VS +++ + LAR T F GA + + +A + A G +T + Y+E
Sbjct: 376 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 425
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 63/177 (35%), Positives = 104/177 (58%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 208 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 267
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSK-NID 136
V ++ ATNR D LD ALLRPGR D ++++ P+ R +IL ++ G I +ID
Sbjct: 268 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHSGPITKHGDID 327
Query: 137 VDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+ + + + GF GADL N+ +A + A +VT + A KV + +S+L
Sbjct: 328 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDFMKAVRKVADSKKLESKL 384
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 294 (108.6 bits), Expect = 6.1e-25, P = 6.1e-25
Identities = 65/162 (40%), Positives = 97/162 (59%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSV--LHPYANQTIN 68
+GPE + G+ VR+LF A+ PCV+F DE+DS+ R +S ++ IN
Sbjct: 541 KGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVIN 600
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 601 QILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKACLN 660
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++D++ L + T GF+GADL + +A A+R +I+
Sbjct: 661 KSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRESIE 702
Score = 273 (101.2 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 57/152 (37%), Positives = 90/152 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
GPE L G+ +R F+ A+ P ++FIDEIDS+ KR + + ++QLL
Sbjct: 269 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQ-GEVERRIVSQLL 327
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI- 130
MDG V+V+GATNR + +D AL R GRFD E+++ PD TGR EI+ ++ +
Sbjct: 328 TLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLEIMRIHTKNMK 387
Query: 131 VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ + +D++ +A T G+ GADL + ++AL+
Sbjct: 388 LDETVDLEAVANETHGYVGADLAALCTESALQ 419
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 294 (108.6 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 65/162 (40%), Positives = 98/162 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 603 QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLR 662
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++D++ LA+ T GF+GADL + +A A+R +I+
Sbjct: 663 KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
Score = 276 (102.2 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 61/154 (39%), Positives = 93/154 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 271 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 328
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 329 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 388
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++D++ +A T G GADL + ++AAL+A
Sbjct: 389 KLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 36 (17.7 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 460 NPSALRETVVEVPQVT 475
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 294 (108.6 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 65/162 (40%), Positives = 98/162 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 603 QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLR 662
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++D++ LA+ T GF+GADL + +A A+R +I+
Sbjct: 663 KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
Score = 276 (102.2 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 61/154 (39%), Positives = 93/154 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 271 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 328
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 329 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 388
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++D++ +A T G GADL + ++AAL+A
Sbjct: 389 KLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 36 (17.7 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 460 NPSALRETVVEVPQVT 475
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 294 (108.6 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 65/162 (40%), Positives = 98/162 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 603 QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLR 662
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++D++ LA+ T GF+GADL + +A A+R +I+
Sbjct: 663 KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
Score = 276 (102.2 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 61/154 (39%), Positives = 93/154 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 271 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 328
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 329 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 388
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++D++ +A T G GADL + ++AAL+A
Sbjct: 389 KLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 36 (17.7 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 460 NPSALRETVVEVPQVT 475
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 294 (108.6 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 65/162 (40%), Positives = 98/162 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 603 QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLR 662
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++D++ LA+ T GF+GADL + +A A+R +I+
Sbjct: 663 KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
Score = 276 (102.2 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 61/154 (39%), Positives = 93/154 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 271 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 328
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 329 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 388
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++D++ +A T G GADL + ++AAL+A
Sbjct: 389 KLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 36 (17.7 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 460 NPSALRETVVEVPQVT 475
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 294 (108.6 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 65/162 (40%), Positives = 98/162 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 603 QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLR 662
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++D++ LA+ T GF+GADL + +A A+R +I+
Sbjct: 663 KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
Score = 276 (102.2 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 61/154 (39%), Positives = 93/154 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 271 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 328
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 329 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 388
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++D++ +A T G GADL + ++AAL+A
Sbjct: 389 KLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 36 (17.7 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 460 NPSALRETVVEVPQVT 475
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 294 (108.6 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 65/162 (40%), Positives = 98/162 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 603 QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLR 662
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++D++ LA+ T GF+GADL + +A A+R +I+
Sbjct: 663 KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
Score = 276 (102.2 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 61/154 (39%), Positives = 93/154 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 271 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 328
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 329 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 388
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++D++ +A T G GADL + ++AAL+A
Sbjct: 389 KLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 36 (17.7 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 460 NPSALRETVVEVPQVT 475
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 286 (105.7 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 64/170 (37%), Positives = 101/170 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 260 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 319
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 320 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 379
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ VS +++ + LAR T F GA + + +A + A G +T + Y+E
Sbjct: 380 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 429
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 294 (108.6 bits), Expect = 6.6e-25, P = 6.6e-25
Identities = 65/162 (40%), Positives = 98/162 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 559 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 618
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 619 QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLR 678
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++D++ LA+ T GF+GADL + +A A+R +I+
Sbjct: 679 KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 720
Score = 276 (102.2 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 61/154 (39%), Positives = 93/154 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 287 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 344
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 345 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 404
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++D++ +A T G GADL + ++AAL+A
Sbjct: 405 KLADDVDLEQVANETHGHVGADLAALCSEAALQA 438
Score = 36 (17.7 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 476 NPSALRETVVEVPQVT 491
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 286 (105.7 bits), Expect = 7.4e-25, P = 7.4e-25
Identities = 64/170 (37%), Positives = 101/170 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 270 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 329
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 330 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 389
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ VS +++ + LAR T F GA + + +A + A G +T + Y+E
Sbjct: 390 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 439
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 61/176 (34%), Positives = 105/176 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRT--NSVLHPYANQTINQ 69
G E + +G+G+R VR+LF A++ P ++F+DEIDS+G+ R +S +T+ +
Sbjct: 211 GSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLE 270
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF ++ + ++ ATNR D LD ALLRPGR D ++ P P R +IL ++
Sbjct: 271 LLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAARTDILKIHSRS 330
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ +++ I++ +A G +GAD++ + +A + A + HVT + E A KV+
Sbjct: 331 MNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVAKVM 386
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 285 (105.4 bits), Expect = 7.8e-25, P = 7.8e-25
Identities = 67/187 (35%), Positives = 109/187 (58%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
G E + +G G + VR+LF+ A D +P +VFIDEID+VG KR NS +T+ +
Sbjct: 255 GSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLE 314
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF V V+ ATNR + LD ALLRPGR D ++ P PD RR I ++ K
Sbjct: 315 LLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSK 374
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ ++++++++ F+GAD++ + +A L A + VT + A++KV+ +
Sbjct: 375 MTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEKVMF--K 432
Query: 189 RKSRLPD 195
+K +P+
Sbjct: 433 KKEGVPE 439
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 283 (104.7 bits), Expect = 8.4e-25, P = 8.4e-25
Identities = 60/155 (38%), Positives = 96/155 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S + +T+ +
Sbjct: 235 GPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLE 294
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF + + V+ ATNR D LD ALLR GR D ++ P P+ R IL ++ K
Sbjct: 295 LLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRK 354
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+ VS +++ D LAR + F GA L+ + +A + A
Sbjct: 355 MNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIA 389
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 284 (105.0 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 67/187 (35%), Positives = 109/187 (58%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
G E + +G G + VR+LF+ A D +P +VFIDEID+VG KR +S +T+ +
Sbjct: 255 GSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLE 314
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF V V+ ATNR + LD ALLRPGR D ++ P PD RR I ++ K
Sbjct: 315 LLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSK 374
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S++++++ F+GAD++ + +A L A + VT + A++KV+ +
Sbjct: 375 MTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEKVMF--K 432
Query: 189 RKSRLPD 195
+K +P+
Sbjct: 433 KKEGVPE 439
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 60/155 (38%), Positives = 95/155 (61%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PCV+F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 212 IGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 271
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSK-NID 136
V ++ ATNR D LD ALLRPGR D ++ +P P+ GR ++L ++ I ++D
Sbjct: 272 DTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVD 331
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGV 168
+ +A+ GF ADL N+ +A A+RA D V
Sbjct: 332 YEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYV 366
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/180 (36%), Positives = 107/180 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 222 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 281
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++++ P+ R +IL ++ G I ID
Sbjct: 282 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID 341
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+ + + + GF GADL N+ +A A+RA D V V +++ R KV + +S+L
Sbjct: 342 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFV--VQEDFMKAVR-KVADSKKLESKL 398
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/180 (36%), Positives = 107/180 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 208 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 267
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++++ P+ R +IL ++ G I ID
Sbjct: 268 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID 327
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+ + + + GF GADL N+ +A A+RA D V V +++ R KV + +S+L
Sbjct: 328 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFV--VQEDFMKAVR-KVADSKKLESKL 384
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/180 (36%), Positives = 107/180 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 208 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 267
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++++ P+ R +IL ++ G I ID
Sbjct: 268 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID 327
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+ + + + GF GADL N+ +A A+RA D V V +++ R KV + +S+L
Sbjct: 328 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFV--VQEDFMKAVR-KVADSKKLESKL 384
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/180 (36%), Positives = 107/180 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 214 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 273
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++++ P+ R +IL ++ G I ID
Sbjct: 274 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID 333
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+ + + + GF GADL N+ +A A+RA D V V +++ R KV + +S+L
Sbjct: 334 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFV--VQEDFMKAVR-KVADSKKLESKL 390
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/180 (36%), Positives = 107/180 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 208 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 267
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++++ P+ R +IL ++ G I ID
Sbjct: 268 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID 327
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+ + + + GF GADL N+ +A A+RA D V V +++ R KV + +S+L
Sbjct: 328 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFV--VQEDFMKAVR-KVADSKKLESKL 384
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/180 (36%), Positives = 107/180 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 222 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 281
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++++ P+ R +IL ++ G I ID
Sbjct: 282 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID 341
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+ + + + GF GADL N+ +A A+RA D V V +++ R KV + +S+L
Sbjct: 342 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFV--VQEDFMKAVR-KVADSKKLESKL 398
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/180 (36%), Positives = 107/180 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 208 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 267
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++++ P+ R +IL ++ G I ID
Sbjct: 268 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID 327
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+ + + + GF GADL N+ +A A+RA D V V +++ R KV + +S+L
Sbjct: 328 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFV--VQEDFMKAVR-KVADSKKLESKL 384
>TIGR_CMR|CHY_2164 [details] [associations]
symbol:CHY_2164 "ATPase, AAA family" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0019538 "protein metabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0464 GO:GO:0017111 RefSeq:YP_360978.1
ProteinModelPortal:Q3AA56 STRING:Q3AA56 GeneID:3726841
KEGG:chy:CHY_2164 PATRIC:21277395
BioCyc:CHYD246194:GJCN-2163-MONOMER Uniprot:Q3AA56
Length = 411
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 57/142 (40%), Positives = 90/142 (63%)
Query: 19 LVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLLAEMDGFH 78
LVG + + +LF AK P ++F DEID++ KR L+ ++ IN LL +MDGF
Sbjct: 235 LVGAAEKTLLELFANAKALRPAIIFFDEIDAIAKKRRAETLNSASDILINILLTQMDGFE 294
Query: 79 QNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKNIDVD 138
+ + V+++ ATNR D LD+A+LRPGRFD ++ +P PD R++ DL+LG+ + K ID +
Sbjct: 295 KVDDVLLIAATNRIDILDEAILRPGRFDQKILIPNPDKEARKKYFDLFLGQKIEKGIDAE 354
Query: 139 TL---ARGTTGFTGADLENMVN 157
L A T GF+ A+++ + +
Sbjct: 355 LLEYLANSTEGFSVAEIKTIAD 376
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/180 (36%), Positives = 107/180 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 208 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 267
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++++ P+ R +IL ++ G I ID
Sbjct: 268 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID 327
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+ + + + GF GADL N+ +A A+RA D V V +++ R KV + +S+L
Sbjct: 328 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFV--VQEDFMKAVR-KVADSKKLESKL 384
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/180 (36%), Positives = 107/180 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 200 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 259
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++++ P+ R +IL ++ G I ID
Sbjct: 260 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID 319
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+ + + + GF GADL N+ +A A+RA D V V +++ R KV + +S+L
Sbjct: 320 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFV--VQEDFMKAVR-KVADSKKLESKL 376
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/180 (36%), Positives = 107/180 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 222 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 281
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++++ P+ R +IL ++ G I ID
Sbjct: 282 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID 341
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+ + + + GF GADL N+ +A A+RA D V V +++ R KV + +S+L
Sbjct: 342 YEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFV--VQEDFMKAVR-KVADSKKLESKL 398
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 291 (107.5 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 68/187 (36%), Positives = 104/187 (55%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQL 70
+GPE VG+ R +R++F+ A+ P ++F DEID++ R S AN + L
Sbjct: 582 KGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSA-ANHVLTSL 640
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L E+DG + +GVV++ ATNR D++D ALLRPGR D + V PPD R EIL K
Sbjct: 641 LNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKF 700
Query: 131 VSKN--IDVDTLARGTTGFTGADLENMVNQAALRAAIDG--VPHVTMKYLEYARDKVLMG 186
++ +D+ LA T G++GA++ + +A L A ++ V V +++ E A + G
Sbjct: 701 NTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARG 760
Query: 187 --PERKS 191
PE S
Sbjct: 761 ITPEMLS 767
Score = 230 (86.0 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 55/162 (33%), Positives = 83/162 (51%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
GP +G+ +RD+F A+ P ++FIDEIDS+ R N ++ + LL
Sbjct: 312 GPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLL 371
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIV 131
MDG VVV+ ATNR + +D AL RPGRFD EV + PD R +IL ++
Sbjct: 372 TLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMS 431
Query: 132 SKNIDVDT-----LARGTTGFTGADLENMVNQAALRAAIDGV 168
S +D+ +A T G+ GADL + ++ ++ G+
Sbjct: 432 SDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGL 473
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 291 (107.5 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 69/179 (38%), Positives = 102/179 (56%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYA----NQT 66
+GPE + G+ +RD+F A+ P VVF+DE+DS+ R S H A ++
Sbjct: 554 KGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGS--HGDAGGASDRV 611
Query: 67 INQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLY 126
+NQLL EMDG + + V V+GATNR D +D ALLRPGR D + VP PD R IL
Sbjct: 612 VNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQ 671
Query: 127 LGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVP-HVTMKYLEYARDKV 183
L + +D++ +A+ T GF+GADL +V ++A A D + V + ++ ++KV
Sbjct: 672 LRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKV 730
Score = 275 (101.9 bits), Expect = 7.2e-23, P = 7.2e-23
Identities = 59/154 (38%), Positives = 94/154 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
GPE + G+ +R F+ A+ +P ++FIDEIDS+ KR TN + + ++Q
Sbjct: 282 GPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTNGEVE---RRVVSQ 338
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL MDG VVV+ ATNR + +D AL R GRFD EV++ PD GR EIL ++
Sbjct: 339 LLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILRIHTKN 398
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ ++ ++D++ +A T GF GAD+ ++ ++AA++
Sbjct: 399 MKLADDVDLEAIASETHGFVGADIASLCSEAAMQ 432
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 291 (107.5 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 69/179 (38%), Positives = 102/179 (56%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYA----NQT 66
+GPE + G+ +RD+F A+ P VVF+DE+DS+ R S H A ++
Sbjct: 554 KGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGS--HGDAGGASDRV 611
Query: 67 INQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLY 126
+NQLL EMDG + + V V+GATNR D +D ALLRPGR D + VP PD R IL
Sbjct: 612 VNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQ 671
Query: 127 LGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVP-HVTMKYLEYARDKV 183
L + +D++ +A+ T GF+GADL +V ++A A D + V + ++ ++KV
Sbjct: 672 LRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKV 730
Score = 275 (101.9 bits), Expect = 7.2e-23, P = 7.2e-23
Identities = 59/154 (38%), Positives = 94/154 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
GPE + G+ +R F+ A+ +P ++FIDEIDS+ KR TN + + ++Q
Sbjct: 282 GPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTNGEVE---RRVVSQ 338
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL MDG VVV+ ATNR + +D AL R GRFD EV++ PD GR EIL ++
Sbjct: 339 LLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILRIHTKN 398
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ ++ ++D++ +A T GF GAD+ ++ ++AA++
Sbjct: 399 MKLADDVDLEAIASETHGFVGADIASLCSEAAMQ 432
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 65/193 (33%), Positives = 108/193 (55%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLH- 60
H D G E + +G+G+R VR+LF A++ P ++F+DEIDS+G++R H
Sbjct: 236 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGE-HG 294
Query: 61 -PYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + V+ TNR D LD+ALLRPGR D ++ P P+ R
Sbjct: 295 DSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEAR 354
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
EIL ++ K+ + + ID+ +A +GA+++ + +A + A + HVT + E
Sbjct: 355 MEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEM 414
Query: 179 ARDKVLMGPERKS 191
A KV+ K+
Sbjct: 415 AVAKVMKQDAEKN 427
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 65/193 (33%), Positives = 108/193 (55%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLH- 60
H D G E + +G+G+R VR+LF A++ P ++F+DEIDS+G++R H
Sbjct: 236 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGE-HG 294
Query: 61 -PYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGR 119
+T+ +LL ++DGF + + V+ TNR D LD+ALLRPGR D ++ P P+ R
Sbjct: 295 DSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEAR 354
Query: 120 REILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
EIL ++ K+ + + ID+ +A +GA+++ + +A + A + HVT + E
Sbjct: 355 MEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEM 414
Query: 179 ARDKVLMGPERKS 191
A KV+ K+
Sbjct: 415 AVAKVMKQDAEKN 427
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 282 (104.3 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 60/167 (35%), Positives = 93/167 (55%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F AK+ PC++F+DE+D++G +R + + +T+ +LL +MDGF
Sbjct: 256 IGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGF 315
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
++ ATNR D LD ALLRPGR D +V +P P+ GR EI ++ K+ D
Sbjct: 316 DNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFD 375
Query: 137 VDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKV 183
+ + + GF GAD+ N +A A D H+ L A KV
Sbjct: 376 FEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKV 422
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 60/157 (38%), Positives = 95/157 (60%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL ++DGF
Sbjct: 215 IGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF 274
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
+ V ++ ATNR D LD ALLRPGR D ++ +P P+ R E+L ++ I ID
Sbjct: 275 DELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEID 334
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPH 170
+ + + GF GADL N+ +A A+RA D V H
Sbjct: 335 YEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVH 371
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 61/157 (38%), Positives = 95/157 (60%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A++ PC++F+DEID++G +R + + +T+ +LL ++DGF
Sbjct: 214 IGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF 273
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
Q V ++ ATNR D LD ALLRPGR D ++ +P P+ R EIL ++ I ID
Sbjct: 274 DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEID 333
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPH 170
+ + + GF GADL N+ +A A+RA D V H
Sbjct: 334 YEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIH 370
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 280 (103.6 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 63/178 (35%), Positives = 101/178 (56%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G E + VG+GAR VR+LF+ AK + C++FIDE+D++G R + H +T+ +
Sbjct: 229 GSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLE 288
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
++ ++DGF + VL ATNR D LD AL+RPGR D + PD GR I ++
Sbjct: 289 IVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANT 348
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMG 186
+ +S+++ + LAR TG+D+ ++ +A + A +T K L A +KV+ G
Sbjct: 349 MNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKVIHG 406
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 280 (103.6 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 63/178 (35%), Positives = 101/178 (56%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G E + VG+GAR VR+LF+ AK + C++FIDE+D++G R + H +T+ +
Sbjct: 229 GSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLE 288
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
++ ++DGF + VL ATNR D LD AL+RPGR D + PD GR I ++
Sbjct: 289 IVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANT 348
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMG 186
+ +S+++ + LAR TG+D+ ++ +A + A +T K L A +KV+ G
Sbjct: 349 MNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKVIHG 406
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 275 (101.9 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 60/153 (39%), Positives = 91/153 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
GPE +G + VRD+F A+ PC++F DE +S+ +R + ++ +NQLL
Sbjct: 911 GPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTG-VTDRVVNQLL 969
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI- 130
++DG +GV VL AT+R D +D ALLRPGR D V PPPD R EIL++ +
Sbjct: 970 TQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSASLP 1029
Query: 131 VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+++++D+ +A T FTGADL+ ++ A L A
Sbjct: 1030 LAEDVDLQHVASLTDSFTGADLKALLYNAQLEA 1062
Score = 46 (21.3 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 177 EYARDKVLMGPERKSRLPDE-ETNMITAY 204
EY D+ L+ E LPDE + NM Y
Sbjct: 1105 EYGLDQSLVSLEMSEVLPDESKINMYRLY 1133
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 58/147 (39%), Positives = 90/147 (61%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 216 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 275
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++ +P P+ R EIL ++ KI ID
Sbjct: 276 DSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEID 335
Query: 137 VDTLARGTTGFTGADLENMVNQAALRA 163
+ + + + F GADL N+ +A L A
Sbjct: 336 YEAIVKLSDNFNGADLRNVCTEAGLFA 362
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 66/180 (36%), Positives = 107/180 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC++F+DEID++G +R + + +T+ +LL +MDGF
Sbjct: 208 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 267
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++++ P+ R +IL ++ G I ID
Sbjct: 268 DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID 327
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVTMKYLEYARDKVLMGPERKSRL 193
+ + + + GF GADL N+ +A A+RA D V V +++ R KV + +S+L
Sbjct: 328 YEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFV--VQEDFMKAVR-KVADSKKLESKL 384
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 63/170 (37%), Positives = 100/170 (58%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 218 GPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLE 277
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 278 LLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 337
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ VS +++ + LAR T F GA + + +A + A G +T + Y+E
Sbjct: 338 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYME 387
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 289 (106.8 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 63/173 (36%), Positives = 104/173 (60%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRT----NSVLHPYANQT 66
+GPE + VG+ R VR++F+ A+ P +VF DEID++G +R+ +S +
Sbjct: 601 KGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERV 660
Query: 67 INQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLY 126
+ QLL E+DG + V ++ ATNR D +DKALLRPGR D + V P RREIL +
Sbjct: 661 LTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKIK 720
Query: 127 LGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEY 178
L + +S ++D++ L + T G++GA+++ + ++AALRA +K+ ++
Sbjct: 721 LRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAEDVKWTDF 773
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/160 (26%), Positives = 81/160 (50%)
Query: 20 VGQGARRVRDLFKAAKDRTP--CVVFIDEIDSVGAKRTNSVLHPYANQTINQLLAEMDGF 77
+G+ +++ +F+ A + P ++ I+++ ++ K+ NS L + LL ++
Sbjct: 351 LGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQENSDLVKRVSLAFLSLLDQLSSP 410
Query: 78 HQNEG--VVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKNI 135
Q +G VL +++ D L ++ R GR D EV + P R EI+ + + +
Sbjct: 411 SQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEHQLS 470
Query: 136 D--VDTLARGTTGFTGADLENMVNQAALRAAIDGV--PHV 171
D V+ +A T G+ GADL N+V A L+A + + PH+
Sbjct: 471 DEEVEHVASITHGYVGADLANLVYAAMLQAQPNPLQMPHL 510
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 289 (106.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 65/162 (40%), Positives = 95/162 (58%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSV--LHPYANQTIN 68
+GPE + G+ VRD+F A+ PC++F DE+DS+ R A++ IN
Sbjct: 545 KGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAADRVIN 604
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 605 QILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSRTAILRANLR 664
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K++D+ L++ T GF+GADL + +A A+R AI+
Sbjct: 665 KSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIE 706
Score = 277 (102.6 bits), Expect = 4.2e-23, P = 4.2e-23
Identities = 61/154 (39%), Positives = 94/154 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 273 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 330
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q VVV+ ATNR + +D AL R GRFD E+++ PD TGR EIL ++ +
Sbjct: 331 LTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLEILQIHTKNM 390
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+S+++D++ ++ T G GADL + ++AAL+A
Sbjct: 391 KLSEDVDLEQISAETHGHVGADLAALCSEAALQA 424
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 289 (106.8 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 59/154 (38%), Positives = 95/154 (61%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQL 70
+GPE VG+ R VRD+FK A+ +P ++F DEID + R+ + ++QL
Sbjct: 688 KGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISRSGEGSGA-VERVVSQL 746
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L EMDG V ++GATNR D +DKA+LR GR D + + PPD R+EI +++L K+
Sbjct: 747 LTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISPPDLDARKEIFNIHLKKV 806
Query: 131 V-SKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
S +ID++ L+ T G++GA++ ++ +A++ A
Sbjct: 807 PHSSDIDINQLSILTDGYSGAEVTSICREASIAA 840
Score = 184 (69.8 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 40/111 (36%), Positives = 67/111 (60%)
Query: 83 VVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSK--NIDVDTL 140
V+V+G TNR D +D AL RPGRFD E+ + P+ GR +IL+++L KI ++ + ++ +
Sbjct: 469 VIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMI 528
Query: 141 ARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYAR-DKVLMGPERK 190
A T GF GAD+E++ +A+L+ + + + K + +K G E K
Sbjct: 529 ASKTHGFVGADIESLCKEASLKC-FNRIKNENQKLFQSINIEKEEKGKEEK 578
Score = 86 (35.3 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
G + + G + ++ +FK A ++P ++FIDE+D++ KR ++ + + LL
Sbjct: 379 GADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNSSE-VEKRIVGSLL 437
Query: 72 AEMDGF----HQNEG 82
MDG QN+G
Sbjct: 438 TLMDGVVSTSDQNDG 452
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 278 (102.9 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 64/182 (35%), Positives = 101/182 (55%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G EF + +G+G R VRD+F+ AK+ P ++FIDEID++ KR ++ + + +
Sbjct: 231 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 290
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +MDGF QN V V+ ATNR D LD ALLRPGR D ++ P PD +R I K
Sbjct: 291 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 350
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S+ +D++ +GAD+ ++ ++ + A + V K E A V+ E
Sbjct: 351 MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 410
Query: 189 RK 190
++
Sbjct: 411 QE 412
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 278 (102.9 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 64/182 (35%), Positives = 101/182 (55%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G EF + +G+G R VRD+F+ AK+ P ++FIDEID++ KR ++ + + +
Sbjct: 232 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 291
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +MDGF QN V V+ ATNR D LD ALLRPGR D ++ P PD +R I K
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 351
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S+ +D++ +GAD+ ++ ++ + A + V K E A V+ E
Sbjct: 352 MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 189 RK 190
++
Sbjct: 412 QE 413
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 278 (102.9 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 64/182 (35%), Positives = 101/182 (55%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G EF + +G+G R VRD+F+ AK+ P ++FIDEID++ KR ++ + + +
Sbjct: 232 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 291
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +MDGF QN V V+ ATNR D LD ALLRPGR D ++ P PD +R I K
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 351
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S+ +D++ +GAD+ ++ ++ + A + V K E A V+ E
Sbjct: 352 MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 189 RK 190
++
Sbjct: 412 QE 413
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 278 (102.9 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 64/182 (35%), Positives = 101/182 (55%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G EF + +G+G R VRD+F+ AK+ P ++FIDEID++ KR ++ + + +
Sbjct: 232 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 291
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +MDGF QN V V+ ATNR D LD ALLRPGR D ++ P PD +R I K
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 351
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S+ +D++ +GAD+ ++ ++ + A + V K E A V+ E
Sbjct: 352 MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 189 RK 190
++
Sbjct: 412 QE 413
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 278 (102.9 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 64/182 (35%), Positives = 101/182 (55%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G EF + +G+G R VRD+F+ AK+ P ++FIDEID++ KR ++ + + +
Sbjct: 232 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 291
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +MDGF QN V V+ ATNR D LD ALLRPGR D ++ P PD +R I K
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 351
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S+ +D++ +GAD+ ++ ++ + A + V K E A V+ E
Sbjct: 352 MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 189 RK 190
++
Sbjct: 412 QE 413
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 278 (102.9 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 64/182 (35%), Positives = 101/182 (55%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G EF + +G+G R VRD+F+ AK+ P ++FIDEID++ KR ++ + + +
Sbjct: 232 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 291
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +MDGF QN V V+ ATNR D LD ALLRPGR D ++ P PD +R I K
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 351
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S+ +D++ +GAD+ ++ ++ + A + V K E A V+ E
Sbjct: 352 MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 189 RK 190
++
Sbjct: 412 QE 413
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 278 (102.9 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 64/182 (35%), Positives = 101/182 (55%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G EF + +G+G R VRD+F+ AK+ P ++FIDEID++ KR ++ + + +
Sbjct: 232 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 291
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +MDGF QN V V+ ATNR D LD ALLRPGR D ++ P PD +R I K
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 351
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S+ +D++ +GAD+ ++ ++ + A + V K E A V+ E
Sbjct: 352 MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 189 RK 190
++
Sbjct: 412 QE 413
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 287 (106.1 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 65/186 (34%), Positives = 103/186 (55%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQL 70
+GPE VG+ R +R++F+ A+ +P ++F DEID++ R A+ + L
Sbjct: 565 KGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGDRDGDSSTTAASNVLTSL 624
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L E+DG + +GVV++GATN+ ++D ALLRPGR D + V PPDY R +IL K
Sbjct: 625 LNEIDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKF 684
Query: 131 V----SKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDG--VPHVTMKYLEYARDKVL 184
+++D+ LA T G +GA++ + +A L A ++ VT K+ E+A +
Sbjct: 685 NLQSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLAAIMENKEATTVTNKHFEHALKGIS 744
Query: 185 MG--PE 188
G PE
Sbjct: 745 RGITPE 750
Score = 270 (100.1 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 61/172 (35%), Positives = 92/172 (53%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
GP +G+ +RD+F AK P ++F+DEIDS+ RT+ ++ + QLL
Sbjct: 297 GPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSDDSGETESRVVAQLL 356
Query: 72 AEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIV 131
MDG N +VV+GATNR + +D AL RPGRFD EV + PD R EIL K+
Sbjct: 357 TVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAREEILTKQFAKMN 416
Query: 132 SKNI-----DVDTLARGTTGFTGADLENMVNQAALRAA----IDGVPHVTMK 174
S+ ++ ++A T G+ GADL + ++ ++A G+P +K
Sbjct: 417 SEKCQITKEEIASIASKTHGYVGADLTALCRESVMKAINRGLTVGIPQTAIK 468
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 64/187 (34%), Positives = 106/187 (56%)
Query: 4 HPDTN--HAQGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL-- 59
H D G E + +G+G+R VR+LF A++ P ++F+DEIDS+G+ R S
Sbjct: 202 HTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGG 261
Query: 60 -HPYANQTINQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTG 118
+T+ +LL ++DGF + + VL TNR D LD ALLRPGR D ++ P P G
Sbjct: 262 GDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAG 321
Query: 119 RREILDLYLGKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLE 177
R +IL ++ K+ +++ I++ ++ G +GA+L+ + +A + A + HV+ + E
Sbjct: 322 RLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFE 381
Query: 178 YARDKVL 184
A KV+
Sbjct: 382 MAVSKVM 388
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 288 (106.4 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 65/167 (38%), Positives = 99/167 (59%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSV-LHPYANQTINQ 69
+GPE VG+ R VR+ F+ A+ P ++F DE+D++ +R +S+ A++ + Q
Sbjct: 693 KGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQ 752
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDG Q + V +L ATNR D +DKAL+RPGR D + VP PD RREI L
Sbjct: 753 LLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHS 812
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVP-HVTMK 174
+ VS +D+D L T ++GA++ + +AAL A + + ++ MK
Sbjct: 813 MPVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQANLIMK 859
Score = 226 (84.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 58/157 (36%), Positives = 86/157 (54%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
GPE G+ ++R +F A R P ++FIDE+D++ KR + + + + LL
Sbjct: 420 GPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQ-NEVEKRVVASLL 478
Query: 72 AEMDGFHQ--NEG-VVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
MDG +EG V+VLGATNR LD AL RPGRFD E+ + P+ R +IL L
Sbjct: 479 TLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLR 538
Query: 129 KI--VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ + ++ LA G+ GADL+ + N+A L A
Sbjct: 539 RVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCA 575
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 277 (102.6 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 62/176 (35%), Positives = 102/176 (57%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G EF + +G+G R VRD+F+ AK+ +P ++FIDEID++ KR ++ + + +
Sbjct: 228 GSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLE 287
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +MDGF Q+ V V+ ATNR+D LD ALLRPGR D ++ P PD +R + +
Sbjct: 288 LLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSR 347
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ +S ++D++ +GAD+ ++ +A ++A + V K LE A V+
Sbjct: 348 MNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVV 403
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 283 (104.7 bits), Expect = 9.6e-24, P = 9.6e-24
Identities = 65/164 (39%), Positives = 98/164 (59%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTIN 68
+GPE + G+ VR++F A+ PCV+F DE+DS+ R ++ A++ IN
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
Q+L EMDG + V ++GATNR D +D A+LRPGR D + +P PD R IL L
Sbjct: 603 QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLR 662
Query: 129 KI-VSK--NIDVDTLARGTTGFTGADLENMVNQA---ALRAAID 166
K V+K ++D++ LA+ T GF+GADL + +A A+R +I+
Sbjct: 663 KSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 706
Score = 276 (102.2 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 61/154 (39%), Positives = 93/154 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTI-NQL 70
GPE L G+ +R F+ A+ P ++FIDE+D++ KR + H + I +QL
Sbjct: 271 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 328
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L MDG Q V+V+ ATNR + +D AL R GRFD EV++ PD TGR EIL ++ +
Sbjct: 329 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 388
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++D++ +A T G GADL + ++AAL+A
Sbjct: 389 KLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 36 (17.7 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 157 NQAALRAAIDGVPHVT 172
N +ALR + VP VT
Sbjct: 460 NPSALRETVVEVPQVT 475
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 286 (105.7 bits), Expect = 3.9e-24, P = 3.9e-24
Identities = 67/156 (42%), Positives = 93/156 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRT---PCVVFIDEIDSVGAKRTNSVLHPYANQTIN 68
GPE G+ +R +F+ A+D PCV+ IDEIDS+ +RT S P N+ +
Sbjct: 254 GPEVTGSRPGESEENLRRVFEQARDAADDGPCVLLIDEIDSLCPRRTGSSSAP-ENRLVA 312
Query: 69 QLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
QLL MD +EG V++GATN+ D LD AL RPGRFD EV + P RR IL
Sbjct: 313 QLLTLMDAIGSHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILKCVCR 372
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ +S ++D++TLA T G+ GADL + +AAL+A
Sbjct: 373 EMPLSPDVDLNTLAEMTCGYVGADLSALSREAALQA 408
Score = 173 (66.0 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 43/100 (43%), Positives = 61/100 (61%)
Query: 80 NEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI-VSKNIDVD 138
N+ V+++ ATNR + LD ALLRPGR D + VPPPD R +L + + + +++ ++
Sbjct: 623 NKDVLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLE 682
Query: 139 TLARGTTGFTGADLENMVNQAALRAAI-DG--VPHVTMKY 175
LA T F+GADLEN+ +AAL A DG V V KY
Sbjct: 683 DLAAQTELFSGADLENLCKEAALLALREDGLAVSCVRQKY 722
Score = 102 (41.0 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDS-VGAKRT-NSVLHPYANQTINQ 69
G E VG + + LF A+ P +VF+DE+DS VG++ +S H +Q ++
Sbjct: 519 GAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSMVGSREDGSSSSHSVQSQVLSV 578
Query: 70 LLAEMDG 76
LL E+DG
Sbjct: 579 LLTELDG 585
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 286 (105.7 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 70/199 (35%), Positives = 106/199 (53%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR---TNSVLHPYANQTI 67
+GPE + G+ VR++F A+ PCV+F DE+DS+ +R + A++ +
Sbjct: 546 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVL 605
Query: 68 NQLLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYL 127
NQLL EMDG + + V ++GATNR D +D ALLRPGR D + +P PD R I L
Sbjct: 606 NQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAAL 665
Query: 128 GKI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMG 186
K ++K++D+ LA+ T GF+GAD+ + +A A + + K E R +
Sbjct: 666 RKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEK--EKRRSE---N 720
Query: 187 PERKSRLPDEETNMITAYH 205
PE +E + I A H
Sbjct: 721 PEAMEEDGVDEVSEIKAAH 739
Score = 275 (101.9 bits), Expect = 7.0e-23, P = 7.0e-23
Identities = 58/154 (37%), Positives = 94/154 (61%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
GPE L G+ +R F+ A+ P ++FIDEIDS+ KR TN + + ++Q
Sbjct: 274 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE---RRIVSQ 330
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL MDG V+V+GATNR + +D AL R GRFD E+++ PD GR E+L ++
Sbjct: 331 LLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKN 390
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALR 162
+ +++++D++ +++ T G+ GADL + +AAL+
Sbjct: 391 MKLAEDVDLERISKDTHGYVGADLAALCTEAALQ 424
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 286 (105.7 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 62/155 (40%), Positives = 98/155 (63%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR-TNSVLHPYANQTINQ 69
+GPE VG+ R VR++F+ A+ +P ++F DE+D++ +R ++S A++ + Q
Sbjct: 693 KGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAIERGSSSGAGNVADRVLAQ 752
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL EMDG Q + V +L ATNR D +DKAL+RPGR D + VP PD RREIL+L
Sbjct: 753 LLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHS 812
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+ +S ++++D L T ++GA++ + +AAL A
Sbjct: 813 MPISNDVNLDELIFQTDTYSGAEIIAVCREAALLA 847
Score = 238 (88.8 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 61/169 (36%), Positives = 94/169 (55%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQLL 71
GPE G+ R+R +F A R P ++FIDE+D++ KR + + + + LL
Sbjct: 420 GPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQ-NEVEKRVVASLL 478
Query: 72 AEMDGFHQ--NEG-VVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
MDG +EG V+VLGATNR LD AL RPGRFD E+ + P+ R +IL L
Sbjct: 479 TLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQKLLQ 538
Query: 129 KI--VSKNIDVDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPHVT 172
++ + +++ LA G+ GADL+ + N+A ALR ++ P+++
Sbjct: 539 RVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRRVLNKQPNLS 587
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 277 (102.6 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 63/170 (37%), Positives = 99/170 (58%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D+ G KR +S +T+ +
Sbjct: 248 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFDSEKAGDREVQRTMLE 307
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 308 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEARARIMQIHSRK 367
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ VS +++ + LAR F GA + + +A + A G +T + Y+E
Sbjct: 368 MNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGTTELTHEDYME 417
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 59/157 (37%), Positives = 94/157 (59%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A++ PC++F+DEID++G +R + + +T+ +LL ++DGF
Sbjct: 214 IGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF 273
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V ++ ATNR D LD ALLRPGR D ++ +P P+ R +IL ++ I ID
Sbjct: 274 DNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEID 333
Query: 137 VDTLARGTTGFTGADLENMVNQA---ALRAAIDGVPH 170
+ + + GF GADL N+ +A A+RA D V H
Sbjct: 334 YEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIH 370
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 275 (101.9 bits), Expect = 8.6e-24, P = 8.6e-24
Identities = 62/170 (36%), Positives = 99/170 (58%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +
Sbjct: 241 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 300
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF N V V+ ATNR D LD ALLR GR D ++ P P+ R I+ ++ K
Sbjct: 301 LLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 360
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLE 177
+ V +++ + LAR T F GA + + +A + A G + + Y+E
Sbjct: 361 MNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYME 410
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 56/150 (37%), Positives = 93/150 (62%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F AK+ PC++F+DEID++G +R + + +T+ +LL ++DGF
Sbjct: 212 IGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF 271
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI-VSKNID 136
++ ATNR D LD ALLR GR D ++ +P P+ GR EIL ++ + + +ID
Sbjct: 272 DYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGRLEILKIHSSTVQMEGDID 331
Query: 137 VDTLARGTTGFTGADLENMVNQAALRAAID 166
+++ + + G GADL N+V +A L A D
Sbjct: 332 FESVVKMSDGLNGADLRNVVTEAGLFAIKD 361
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 275 (101.9 bits), Expect = 9.8e-24, P = 9.8e-24
Identities = 61/158 (38%), Positives = 96/158 (60%)
Query: 13 PEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQL 70
P+ ++ +G+GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +L
Sbjct: 249 PQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLEL 308
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L ++DGF ++ V VL ATNR D LD ALLR GR D ++ P P R +IL ++ K+
Sbjct: 309 LNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKM 368
Query: 131 VSKN-IDVDTLARGTTGFTGADLENMVNQAALRAAIDG 167
+ + I+ LAR T F GA L+ + +A + A +G
Sbjct: 369 TTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNG 406
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 283 (104.7 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 60/148 (40%), Positives = 93/148 (62%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRT---NSVLHPYANQTINQLLAEMDG 76
+G + +RD+FK A+ TP ++F DEID++ +KR NS ++ ++ L EMDG
Sbjct: 645 LGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDG 704
Query: 77 FHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI-VSKNI 135
Q GV+V+GATNR D +D ALLRPGRFD + + PD R +IL + I +S N+
Sbjct: 705 VEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRLKILKIKTKSIPLSDNV 764
Query: 136 DVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++ T GF+GADLEN+ +A+ ++
Sbjct: 765 NLIEISNLTNGFSGADLENLCREASFQS 792
Score = 219 (82.2 bits), Expect = 7.3e-17, P = 7.3e-17
Identities = 52/155 (33%), Positives = 90/155 (58%)
Query: 20 VGQGARRVRDLFKAAKDRT------PCVVFIDEIDSVGAKRTNSVLHPYANQTINQLLAE 73
+G+ +R++F+ A D++ P VVFIDEID++ R+ S + ++ + Q L
Sbjct: 362 IGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKSTQNE--SRVVGQFLTL 419
Query: 74 MDGFHQNEG-VVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI-V 131
+DG +G ++++ ATNR + +D AL RPGR D E+ +P P+ R +IL LY K+ +
Sbjct: 420 LDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQRLDILKLYCSKLPI 479
Query: 132 S---KNIDVDTLARGTTGFTGADLENMVNQAALRA 163
S N+ +D +A T G+ GA+++ + +A A
Sbjct: 480 SPTPSNL-LDQIADETVGYVGANIQFLCRDSAFIA 513
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 272 (100.8 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 57/147 (38%), Positives = 90/147 (61%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC+VF+DEID++G +R + + +T+ +LL ++DGF
Sbjct: 225 IGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF 284
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V V+ ATNR D LD ALLRPGR D ++ + P+ R EIL ++ KI ID
Sbjct: 285 DSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEID 344
Query: 137 VDTLARGTTGFTGADLENMVNQAALRA 163
+ + + + GF+ ADL N+ +A + A
Sbjct: 345 FEAVVKLSDGFSAADLRNVCTEAGMFA 371
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 272 (100.8 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 57/147 (38%), Positives = 90/147 (61%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F A+D PC+VF+DEID++G +R + + +T+ +LL ++DGF
Sbjct: 225 IGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF 284
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
V V+ ATNR D LD ALLRPGR D ++ + P+ R EIL ++ KI ID
Sbjct: 285 DSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEID 344
Query: 137 VDTLARGTTGFTGADLENMVNQAALRA 163
+ + + + GF+ ADL N+ +A + A
Sbjct: 345 FEAVVKLSDGFSAADLRNVCTEAGMFA 371
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 274 (101.5 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 61/176 (34%), Positives = 105/176 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
G E + +G G R R +FK A + P +VFIDEID++G KR +NS +T+ +
Sbjct: 249 GSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE 308
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF V V+ ATN+ + LD AL+RPGR D ++ PD + +++IL ++ K
Sbjct: 309 LLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSK 368
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ +S++++++TL +GAD++ M +A L A + VT + + A+++V+
Sbjct: 369 MNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVM 424
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 272 (100.8 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 63/182 (34%), Positives = 100/182 (54%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G EF + +G+G R VRD+F+ AK+ P ++FIDEID++ KR ++ + + +
Sbjct: 232 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 291
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +MDGF QN V V+ ATNR D LD ALL PGR D ++ P PD +R + K
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQKRLVFSTITSK 351
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPE 188
+ +S+ +D++ +GAD+ ++ +A + A + V K E A V+ E
Sbjct: 352 MNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 189 RK 190
++
Sbjct: 412 QE 413
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 273 (101.2 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 61/176 (34%), Positives = 103/176 (58%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
G E + +G G + VR+LF+ A++ P +VFIDEID++G KR +NS +T+ +
Sbjct: 252 GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE 311
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF V V+ ATNR + LD AL+RPGR D ++ P PD +R I ++ +
Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSR 371
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ V++++ +D L +GAD++ + +A L A + VT + + +++ VL
Sbjct: 372 MTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 427
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 272 (100.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 65/183 (35%), Positives = 107/183 (58%)
Query: 13 PEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQL 70
P+ ++ +G GA+ VRD F AK+++P ++FIDE+D++G KR +S +T+ +L
Sbjct: 253 PQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 312
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L ++DGF ++ V V+ ATNR D LD ALLR GR D ++ P P+ R IL ++ K+
Sbjct: 313 LNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKM 372
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVLMGPER 189
+ +I+ + LAR T + GA L+++ +A + A G + E+ D +L R
Sbjct: 373 AIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINH---EHFMDGILEVQMR 429
Query: 190 KSR 192
KS+
Sbjct: 430 KSK 432
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 273 (101.2 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 62/159 (38%), Positives = 95/159 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
GP+ ++ +G GA+ VRD F AK++ P ++FIDE+D+VG KR +S +T+ +
Sbjct: 278 GPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGDREVQRTMLE 337
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF ++ + VL ATNR D LD ALLR GR D ++ P P+ R IL ++ K
Sbjct: 338 LLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEARANILQIHSRK 397
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDG 167
+ V +++ LAR T F GA L+ + +A + A G
Sbjct: 398 MTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRKG 436
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 270 (100.1 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 57/155 (36%), Positives = 90/155 (58%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G EF + +G+G R VRD+F+ AK+ P ++FIDEID++ KR ++ + + +
Sbjct: 227 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 286
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +MDGF Q V V+ ATNR D LD ALLRPGR D ++ P PD +R + K
Sbjct: 287 LLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSK 346
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+ +S+++D++ +GAD+ + +A + A
Sbjct: 347 MNLSEDVDLEEFVARPDKISGADINAICQEAGMHA 381
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 281 (104.0 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 64/167 (38%), Positives = 98/167 (58%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQL 70
+GPE +G + VR+LF+ A+ PC++F DE DS+ KR + ++ +NQ+
Sbjct: 801 KGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTG-VTDRVVNQM 859
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L +MDG +GV VL AT+R D +D ALLRPGR D V P+Y R +IL K+
Sbjct: 860 LTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKM 919
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYL 176
+S ++++ +A TTGF+GAD++ + A L+A HVT++ L
Sbjct: 920 DLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAV-----HVTLEEL 961
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 281 (104.0 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 64/167 (38%), Positives = 98/167 (58%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQL 70
+GPE +G + VR+LF+ A+ PC++F DE DS+ KR + ++ +NQ+
Sbjct: 801 KGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTG-VTDRVVNQM 859
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L +MDG +GV VL AT+R D +D ALLRPGR D V P+Y R +IL K+
Sbjct: 860 LTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKM 919
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYL 176
+S ++++ +A TTGF+GAD++ + A L+A HVT++ L
Sbjct: 920 DLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAV-----HVTLEEL 961
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 272 (100.8 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 63/177 (35%), Positives = 105/177 (59%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
G E + +G G R VR LF AA++ +P +VFIDEID++G KR S +T+ +
Sbjct: 258 GSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLE 317
Query: 70 LLAEMDGFHQNE-GVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLG 128
LL ++DGF ++ + V+ ATNR DLD AL+RPGR D ++ PD +R+I ++
Sbjct: 318 LLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTS 377
Query: 129 KI-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
K+ + ++++++ L + +GA+++ +V++A L A + V M AR+KVL
Sbjct: 378 KMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVL 434
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 271 (100.5 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 70/187 (37%), Positives = 105/187 (56%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G E + VG+GAR VR+LF+ A+ + C++F DEID+VG R + +T+ +
Sbjct: 244 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLE 303
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
L+ ++DGF + VL ATNR D LD AL+RPGR D +V PD GR IL ++ +
Sbjct: 304 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQ 363
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLEYARDKVLMGP 187
+ V ++I D LAR TGA++ ++ +A + A T K +LE A +KV+ G
Sbjct: 364 MSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLE-AINKVVKGY 422
Query: 188 ERKSRLP 194
+ S P
Sbjct: 423 AKFSATP 429
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 271 (100.5 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 70/187 (37%), Positives = 105/187 (56%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G E + VG+GAR VR+LF+ A+ + C++F DEID+VG R + +T+ +
Sbjct: 244 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLE 303
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
L+ ++DGF + VL ATNR D LD AL+RPGR D +V PD GR IL ++ +
Sbjct: 304 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQ 363
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMK-YLEYARDKVLMGP 187
+ V ++I D LAR TGA++ ++ +A + A T K +LE A +KV+ G
Sbjct: 364 MSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLE-AINKVVKGY 422
Query: 188 ERKSRLP 194
+ S P
Sbjct: 423 AKFSATP 429
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 281 (104.0 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 62/154 (40%), Positives = 91/154 (59%)
Query: 11 QGPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHPYANQTINQL 70
+GPE +G + VRD+F A+ PC+VF DE DS+ +R + ++ +NQL
Sbjct: 914 KGPELLSKYIGASEQAVRDIFSRAQAAKPCIVFFDEFDSIAPRRGHDNTG-VTDRVVNQL 972
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L ++DG +GV VL AT+R D +D ALLRPGR D + PPPD + R EIL +
Sbjct: 973 LTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQSSRCEILKALSHSL 1032
Query: 131 -VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
++ ++D++ LA T FTGADL+ ++ A L A
Sbjct: 1033 SLANDVDLEYLAAKTEHFTGADLKALLYNAQLEA 1066
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 271 (100.5 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 61/159 (38%), Positives = 93/159 (58%)
Query: 13 PEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQL 70
P+ ++ +G GA+ VRD F AK++ P ++FIDE+D++G KR +S +T+ +L
Sbjct: 268 PQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDKSGDREVQRTMLEL 327
Query: 71 LAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKI 130
L ++DGF ++ V VL ATNR D LD ALLR GR D ++ P P R +L ++ K+
Sbjct: 328 LNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEARESVLKIHARKL 387
Query: 131 VSKNIDVD--TLARGTTGFTGADLENMVNQAALRAAIDG 167
N V+ LAR T F GA L+ + +A + A +G
Sbjct: 388 HCDNNSVNWRELARSTDEFNGAQLKAVTVEAGMIALRNG 426
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 55/155 (35%), Positives = 94/155 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G EF + +G+G R VRD+F+ A++ +P ++FIDE+D++ KR ++ + + +
Sbjct: 205 GSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGADREVQRILLE 264
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +MDGF ++ V V+ ATNR D LD ALLRPGR D ++ P PD +R I + K
Sbjct: 265 LLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISK 324
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+ VS ++++++ T + AD+ + +A ++A
Sbjct: 325 MNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQA 359
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 55/155 (35%), Positives = 94/155 (60%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVLHP--YANQTINQ 69
G EF + +G+G R VRD+F+ A++ +P ++FIDE+D++ KR ++ + + +
Sbjct: 205 GSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGADREVQRILLE 264
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL +MDGF ++ V V+ ATNR D LD ALLRPGR D ++ P PD +R I + K
Sbjct: 265 LLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISK 324
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRA 163
+ VS ++++++ T + AD+ + +A ++A
Sbjct: 325 MNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQA 359
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 270 (100.1 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 61/176 (34%), Positives = 102/176 (57%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
G E + +G G + VR+LF+ A++ P +VFIDEID++G KR +NS +T+ +
Sbjct: 252 GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE 311
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF V V+ ATNR + LD AL+RPGR D ++ P PD +R I ++ +
Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSR 371
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ V+ ++ +D L +GAD++ + +A L A + VT + + +++ VL
Sbjct: 372 MTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 427
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 269 (99.8 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 61/176 (34%), Positives = 103/176 (58%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTNSVL--HPYANQTINQ 69
G E + +G G + VR+LF+ A + P +VFIDEID+VG KR +S +T+ +
Sbjct: 251 GSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLE 310
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF V V+ ATNR + LD AL+RPGR D ++ P PD +R+I +++ K
Sbjct: 311 LLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAK 370
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ +S++++++ +GAD++ + ++ L A + VT + A++KVL
Sbjct: 371 MNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVL 426
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 268 (99.4 bits), Expect = 5.6e-23, P = 5.6e-23
Identities = 57/167 (34%), Positives = 94/167 (56%)
Query: 20 VGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKRTN--SVLHPYANQTINQLLAEMDGF 77
+G+ AR +R++F AK+ PC++F+DE+D++G +R + + +T+ +LL +MDGF
Sbjct: 247 IGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 306
Query: 78 HQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGKIVSKN-ID 136
++ ATNR D LD ALLR GR D ++ + P+ GR EI ++ K+ + D
Sbjct: 307 DTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIHTSKVAKQGEFD 366
Query: 137 VDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKV 183
+ + + GF GAD+ N+V +A A D ++ L A KV
Sbjct: 367 FEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQNDLMKAVRKV 413
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 59/176 (33%), Positives = 102/176 (57%)
Query: 12 GPEFDEVLVGQGARRVRDLFKAAKDRTPCVVFIDEIDSVGAKR--TNSVLHPYANQTINQ 69
G E + +G G + VR+LF+ A++ P +VFIDEID++G KR +NS +T+ +
Sbjct: 179 GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE 238
Query: 70 LLAEMDGFHQNEGVVVLGATNRRDDLDKALLRPGRFDIEVNVPPPDYTGRREILDLYLGK 129
LL ++DGF V V+ ATNR + LD AL+RPGR D ++ P PD ++ I ++ +
Sbjct: 239 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 298
Query: 130 I-VSKNIDVDTLARGTTGFTGADLENMVNQAALRAAIDGVPHVTMKYLEYARDKVL 184
+ ++ ++ +D L +GAD++ + +A L A + VT + + +++ VL
Sbjct: 299 MTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 354
WARNING: HSPs involving 388 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.137 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 235 235 0.00088 113 3 11 22 0.43 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 638
No. of states in DFA: 560 (60 KB)
Total size of DFA: 159 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.41u 0.08s 20.49t Elapsed: 00:00:21
Total cpu time: 20.47u 0.08s 20.55t Elapsed: 00:00:21
Start: Thu Aug 15 12:24:49 2013 End: Thu Aug 15 12:25:10 2013
WARNINGS ISSUED: 2