Query psy10046
Match_columns 805
No_of_seqs 557 out of 3296
Neff 8.1
Searched_HMMs 46136
Date Fri Aug 16 16:28:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10046.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10046hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2504|consensus 100.0 3.1E-33 6.8E-38 320.1 34.0 407 155-805 38-444 (509)
2 TIGR01299 synapt_SV2 synaptic 100.0 1.1E-31 2.4E-36 318.5 37.3 204 155-359 159-377 (742)
3 TIGR00892 2A0113 monocarboxyla 100.0 1.9E-30 4.1E-35 297.3 35.9 377 155-805 11-389 (455)
4 PRK14995 methyl viologen resis 100.0 3.6E-30 7.8E-35 298.2 34.0 398 161-804 4-406 (495)
5 COG2814 AraJ Arabinose efflux 100.0 2.2E-29 4.8E-34 274.2 33.8 341 162-804 12-354 (394)
6 TIGR02332 HpaX 4-hydroxyphenyl 100.0 5.7E-29 1.2E-33 281.5 36.7 176 161-337 6-188 (412)
7 TIGR00890 2A0111 Oxalate/Forma 100.0 1.5E-29 3.3E-34 280.0 26.5 343 166-804 6-350 (377)
8 PRK11551 putative 3-hydroxyphe 100.0 2E-28 4.2E-33 276.1 34.3 352 160-805 12-364 (406)
9 PRK03545 putative arabinose tr 100.0 3E-28 6.5E-33 273.5 34.2 175 161-336 7-182 (390)
10 TIGR00711 efflux_EmrB drug res 100.0 1E-28 2.3E-33 284.7 28.8 393 167-804 6-403 (485)
11 COG2271 UhpC Sugar phosphate p 100.0 7.8E-29 1.7E-33 266.0 25.5 369 159-802 25-400 (448)
12 TIGR00891 2A0112 putative sial 100.0 9.1E-28 2E-32 269.2 35.5 171 159-330 8-181 (405)
13 PRK11663 regulatory protein Uh 100.0 7.7E-28 1.7E-32 274.2 31.0 176 160-336 20-196 (434)
14 TIGR00903 2A0129 major facilit 100.0 1.4E-27 3E-32 265.7 31.8 157 179-337 7-164 (368)
15 PRK09705 cynX putative cyanate 100.0 1.6E-27 3.4E-32 268.1 31.3 339 161-804 8-348 (393)
16 PRK09556 uhpT sugar phosphate 100.0 3.7E-28 8.1E-33 279.4 25.8 175 162-337 28-211 (467)
17 PRK10213 nepI ribonucleoside t 100.0 8.7E-27 1.9E-31 262.1 36.2 171 161-332 18-189 (394)
18 TIGR00895 2A0115 benzoate tran 100.0 8.4E-27 1.8E-31 260.3 33.7 177 160-337 14-191 (398)
19 TIGR00900 2A0121 H+ Antiporter 100.0 1E-26 2.2E-31 256.5 31.9 333 180-804 16-356 (365)
20 TIGR00893 2A0114 d-galactonate 100.0 5.5E-27 1.2E-31 260.5 29.9 160 177-337 8-168 (399)
21 PRK03699 putative transporter; 100.0 7.4E-27 1.6E-31 262.7 30.9 341 161-804 5-348 (394)
22 PRK12307 putative sialic acid 100.0 1.8E-26 3.9E-31 261.8 33.4 165 160-325 15-180 (426)
23 PF07690 MFS_1: Major Facilita 100.0 3.8E-27 8.3E-32 258.8 25.3 335 177-802 10-352 (352)
24 PRK10091 MFS transport protein 100.0 7E-26 1.5E-30 253.7 35.2 159 177-336 17-176 (382)
25 PRK10406 alpha-ketoglutarate t 100.0 6E-26 1.3E-30 258.5 35.2 171 160-330 19-211 (432)
26 KOG0253|consensus 100.0 5.9E-27 1.3E-31 244.5 24.3 205 151-358 66-272 (528)
27 PRK10642 proline/glycine betai 100.0 8E-26 1.7E-30 261.7 36.4 167 163-329 16-204 (490)
28 PRK10504 putative transporter; 100.0 4.7E-26 1E-30 262.2 33.1 386 172-804 19-408 (471)
29 PLN00028 nitrate transmembrane 100.0 6.2E-26 1.3E-30 261.5 32.4 165 171-337 44-218 (476)
30 PRK10077 xylE D-xylose transpo 100.0 1.2E-25 2.6E-30 259.1 34.5 173 162-336 11-213 (479)
31 TIGR00710 efflux_Bcr_CflA drug 99.9 1.2E-25 2.5E-30 250.8 32.7 157 180-337 22-179 (385)
32 TIGR00881 2A0104 phosphoglycer 99.9 6.6E-27 1.4E-31 259.1 22.4 162 175-337 7-170 (379)
33 PRK15402 multidrug efflux syst 99.9 1.7E-25 3.7E-30 252.4 33.4 176 160-336 10-186 (406)
34 TIGR00894 2A0114euk Na(+)-depe 99.9 2.7E-26 5.8E-31 263.8 27.1 180 157-337 13-218 (465)
35 TIGR00887 2A0109 phosphate:H+ 99.9 4.1E-25 8.9E-30 256.5 36.9 193 156-350 9-238 (502)
36 PRK15034 nitrate/nitrite trans 99.9 3.5E-25 7.5E-30 249.5 34.9 174 162-337 33-231 (462)
37 TIGR00879 SP MFS transporter, 99.9 1E-25 2.2E-30 257.4 31.3 156 180-336 45-215 (481)
38 PRK11273 glpT sn-glycerol-3-ph 99.9 1.7E-25 3.6E-30 256.4 31.5 176 160-337 26-207 (452)
39 PRK09952 shikimate transporter 99.9 4.9E-25 1.1E-29 251.4 33.6 168 160-328 19-210 (438)
40 TIGR00898 2A0119 cation transp 99.9 1.9E-26 4.1E-31 267.8 21.6 170 184-357 110-284 (505)
41 TIGR00886 2A0108 nitrite extru 99.9 4.8E-25 1E-29 244.4 31.8 160 174-335 12-185 (366)
42 TIGR00896 CynX cyanate transpo 99.9 1E-25 2.2E-30 249.5 25.5 148 179-328 16-165 (355)
43 PRK11043 putative transporter; 99.9 1.4E-24 3.1E-29 244.5 35.1 162 175-337 18-180 (401)
44 PRK03893 putative sialic acid 99.9 1E-24 2.2E-29 252.6 33.7 165 160-325 17-182 (496)
45 PRK11646 multidrug resistance 99.9 2.6E-24 5.7E-29 242.5 35.4 156 180-337 28-184 (400)
46 PRK15075 citrate-proton sympor 99.9 1.3E-24 2.7E-29 247.8 33.0 164 161-324 13-198 (434)
47 PRK05122 major facilitator sup 99.9 1.4E-24 3E-29 244.3 31.6 146 182-328 34-189 (399)
48 PRK10133 L-fucose transporter; 99.9 3.8E-24 8.3E-29 243.8 33.9 131 180-311 43-177 (438)
49 PRK03633 putative MFS family t 99.9 2.8E-24 6E-29 240.6 32.0 137 179-316 22-159 (381)
50 TIGR00897 2A0118 polyol permea 99.9 3.2E-24 7E-29 241.9 32.6 146 185-331 35-186 (402)
51 PRK11652 emrD multidrug resist 99.9 4.6E-24 9.9E-29 239.7 32.9 165 171-336 16-181 (394)
52 TIGR00885 fucP L-fucose:H+ sym 99.9 5.3E-24 1.2E-28 240.6 32.9 331 172-804 11-374 (410)
53 PRK09874 drug efflux system pr 99.9 8.1E-24 1.7E-28 238.3 33.8 156 180-337 31-192 (408)
54 PRK15403 multidrug efflux syst 99.9 1E-23 2.2E-28 238.8 34.6 159 177-336 30-189 (413)
55 cd06174 MFS The Major Facilita 99.9 3.4E-24 7.3E-29 234.4 28.8 305 177-804 13-320 (352)
56 PRK10473 multidrug efflux syst 99.9 1.7E-23 3.7E-28 235.0 34.3 158 179-337 19-177 (392)
57 TIGR00899 2A0120 sugar efflux 99.9 6.6E-24 1.4E-28 235.9 30.5 154 183-337 17-175 (375)
58 PRK12382 putative transporter; 99.9 1.3E-23 2.8E-28 236.0 32.3 145 181-326 33-187 (392)
59 TIGR00712 glpT glycerol-3-phos 99.9 4.4E-24 9.5E-29 243.6 28.7 175 161-337 25-205 (438)
60 PRK10489 enterobactin exporter 99.9 7.2E-24 1.6E-28 240.2 29.9 326 181-804 35-367 (417)
61 COG2223 NarK Nitrate/nitrite t 99.9 7.9E-24 1.7E-28 228.2 27.1 339 163-802 14-366 (417)
62 PRK11102 bicyclomycin/multidru 99.9 1.1E-23 2.4E-28 234.8 29.4 157 180-337 8-165 (377)
63 PTZ00207 hypothetical protein; 99.9 4E-23 8.7E-28 238.8 34.2 179 158-340 23-208 (591)
64 PF06609 TRI12: Fungal trichot 99.9 9E-24 1.9E-28 242.6 28.4 389 180-803 61-459 (599)
65 KOG2532|consensus 99.9 9.4E-24 2E-28 239.3 27.7 147 191-338 66-216 (466)
66 TIGR00902 2A0127 phenyl propri 99.9 1.7E-23 3.6E-28 234.5 29.3 323 180-804 21-348 (382)
67 PRK10054 putative transporter; 99.9 6.9E-23 1.5E-27 230.6 29.9 153 182-336 27-180 (395)
68 PRK11195 lysophospholipid tran 99.9 2.5E-22 5.3E-27 226.0 33.5 143 183-330 23-166 (393)
69 KOG2533|consensus 99.9 3.2E-23 6.9E-28 235.5 23.0 152 188-340 71-229 (495)
70 TIGR00883 2A0106 metabolite-pr 99.9 1.1E-22 2.5E-27 226.4 26.9 151 180-330 10-183 (394)
71 TIGR00901 2A0125 AmpG-related 99.9 7.2E-22 1.6E-26 218.7 32.4 152 182-336 7-176 (356)
72 KOG1330|consensus 99.9 5.3E-24 1.1E-28 230.8 14.3 178 160-338 30-209 (493)
73 PRK11128 putative 3-phenylprop 99.9 2.7E-22 5.9E-27 224.6 28.5 323 180-804 21-348 (382)
74 KOG0569|consensus 99.9 2.4E-21 5.3E-26 217.4 35.9 341 200-800 62-419 (485)
75 PRK15011 sugar efflux transpor 99.9 1.5E-21 3.3E-26 219.5 32.1 151 185-337 38-193 (393)
76 PRK08633 2-acyl-glycerophospho 99.9 6.8E-22 1.5E-26 251.9 32.3 330 183-803 30-376 (1146)
77 KOG0255|consensus 99.9 2.6E-22 5.7E-27 234.2 23.2 165 190-358 110-276 (521)
78 PRK06814 acylglycerophosphoeth 99.9 1.2E-21 2.5E-26 249.4 30.7 314 198-804 52-389 (1140)
79 PRK11010 ampG muropeptide tran 99.9 3.8E-21 8.1E-26 222.4 31.8 153 181-336 30-193 (491)
80 COG2807 CynX Cyanate permease 99.9 1.6E-20 3.5E-25 198.3 29.9 340 162-804 11-352 (395)
81 KOG0254|consensus 99.9 1.3E-20 2.9E-25 219.2 32.2 159 198-358 89-251 (513)
82 COG0738 FucP Fucose permease [ 99.9 1.7E-20 3.7E-25 201.1 25.9 335 169-804 18-377 (422)
83 TIGR00889 2A0110 nucleoside tr 99.9 1.7E-20 3.6E-25 212.8 27.5 149 654-804 204-364 (418)
84 PRK09528 lacY galactoside perm 99.9 7.2E-21 1.6E-25 215.9 24.0 147 655-804 220-371 (420)
85 KOG3764|consensus 99.9 1.2E-21 2.5E-26 208.2 14.4 149 191-340 99-249 (464)
86 TIGR00882 2A0105 oligosacchari 99.9 6.7E-20 1.4E-24 206.3 29.4 155 181-337 20-182 (396)
87 TIGR00806 rfc RFC reduced fola 99.9 3.7E-19 7.9E-24 197.2 32.5 159 160-323 25-185 (511)
88 PRK10207 dipeptide/tripeptide 99.9 2.1E-19 4.6E-24 207.2 30.1 146 181-326 33-182 (489)
89 PRK11902 ampG muropeptide tran 99.9 6.1E-19 1.3E-23 198.9 33.1 150 182-334 18-178 (402)
90 TIGR00805 oat sodium-independe 99.8 3.4E-20 7.3E-25 219.8 21.2 158 179-336 49-279 (633)
91 TIGR00792 gph sugar (Glycoside 99.8 8.4E-20 1.8E-24 207.8 23.5 324 185-804 22-373 (437)
92 TIGR00924 yjdL_sub1_fam amino 99.8 1.2E-18 2.6E-23 200.7 30.5 150 184-334 31-188 (475)
93 TIGR02718 sider_RhtX_FptX side 99.8 4.1E-18 8.8E-23 191.3 31.7 157 180-337 18-183 (390)
94 PF05977 MFS_3: Transmembrane 99.8 5.7E-18 1.2E-22 195.4 33.2 323 185-803 32-361 (524)
95 KOG2615|consensus 99.8 1E-18 2.2E-23 184.9 20.6 116 195-312 65-181 (451)
96 PRK09584 tppB putative tripept 99.8 1.9E-17 4E-22 191.9 30.3 148 185-333 44-196 (500)
97 PF00083 Sugar_tr: Sugar (and 99.8 3E-23 6.5E-28 237.3 -18.0 160 198-358 46-213 (451)
98 KOG0252|consensus 99.8 7.3E-18 1.6E-22 182.4 19.4 166 164-330 41-238 (538)
99 TIGR00788 fbt folate/biopterin 99.8 5.2E-17 1.1E-21 186.6 22.1 155 182-337 45-208 (468)
100 PRK09669 putative symporter Ya 99.7 1.8E-16 3.9E-21 181.3 24.7 151 185-336 32-202 (444)
101 TIGR01301 GPH_sucrose GPH fami 99.7 3.5E-15 7.6E-20 169.7 32.4 152 186-337 27-217 (477)
102 KOG4686|consensus 99.7 4.8E-18 1E-22 172.2 6.7 153 160-313 41-198 (459)
103 PF03825 Nuc_H_symport: Nucleo 99.7 2.6E-15 5.6E-20 168.4 27.4 150 653-804 202-357 (400)
104 PRK15462 dipeptide/tripeptide 99.7 2E-14 4.2E-19 164.3 30.8 153 180-333 26-184 (493)
105 PRK10429 melibiose:sodium symp 99.7 6.3E-15 1.4E-19 170.0 26.1 149 654-804 227-386 (473)
106 PF13347 MFS_2: MFS/sugar tran 99.7 6.7E-16 1.4E-20 175.8 16.8 322 185-803 24-376 (428)
107 TIGR01272 gluP glucose/galacto 99.6 5.9E-15 1.3E-19 160.5 20.3 145 654-804 136-283 (310)
108 PRK09848 glucuronide transport 99.6 3.9E-14 8.5E-19 162.2 26.1 150 653-804 223-381 (448)
109 PRK11462 putative transporter; 99.6 1.5E-13 3.3E-18 157.8 30.2 149 186-335 33-201 (460)
110 PF11700 ATG22: Vacuole efflux 99.6 6.7E-13 1.5E-17 151.9 33.4 150 653-804 276-435 (477)
111 KOG2563|consensus 99.6 8.9E-14 1.9E-18 151.3 20.4 156 158-314 40-203 (480)
112 COG2211 MelB Na+/melibiose sym 99.6 4.1E-13 8.9E-18 150.0 24.7 321 188-802 38-387 (467)
113 PF01306 LacY_symp: LacY proto 99.5 6.5E-13 1.4E-17 147.0 23.9 147 653-802 215-366 (412)
114 COG2270 Permeases of the major 99.4 8.9E-12 1.9E-16 135.3 22.6 146 656-804 250-396 (438)
115 PF03137 OATP: Organic Anion T 99.4 1.3E-14 2.9E-19 168.1 -1.6 131 182-312 22-202 (539)
116 PRK10642 proline/glycine betai 99.4 4.1E-11 8.9E-16 139.0 26.5 180 180-360 267-458 (490)
117 PF03209 PUCC: PUCC protein; 99.4 1.1E-10 2.5E-15 127.2 26.6 145 656-801 206-353 (403)
118 PRK15011 sugar efflux transpor 99.4 5E-11 1.1E-15 134.2 25.0 153 184-337 237-390 (393)
119 COG3104 PTR2 Dipeptide/tripept 99.4 4.6E-11 9.9E-16 132.6 23.3 153 184-337 43-205 (498)
120 TIGR00880 2_A_01_02 Multidrug 99.4 5.4E-12 1.2E-16 118.5 13.7 133 204-337 4-137 (141)
121 KOG3626|consensus 99.3 1.9E-11 4.2E-16 142.1 18.1 155 183-337 117-342 (735)
122 TIGR00899 2A0120 sugar efflux 99.3 1.7E-10 3.8E-15 128.1 23.5 149 188-337 225-373 (375)
123 TIGR00889 2A0110 nucleoside tr 99.3 1.2E-10 2.7E-15 132.2 20.9 155 184-339 229-403 (418)
124 PRK09528 lacY galactoside perm 99.3 9.9E-11 2.1E-15 132.9 19.7 145 192-337 256-402 (420)
125 TIGR00890 2A0111 Oxalate/Forma 99.3 6.8E-11 1.5E-15 130.7 17.9 146 185-330 227-374 (377)
126 TIGR01299 synapt_SV2 synaptic 99.3 3E-10 6.5E-15 136.1 24.4 134 202-337 599-733 (742)
127 cd06174 MFS The Major Facilita 99.3 2.3E-10 4.9E-15 125.0 21.5 154 182-336 194-350 (352)
128 PRK09556 uhpT sugar phosphate 99.3 4E-10 8.7E-15 129.9 22.9 156 181-337 276-448 (467)
129 PRK05122 major facilitator sup 99.2 7.7E-10 1.7E-14 124.5 23.4 151 185-338 238-389 (399)
130 PRK12382 putative transporter; 99.2 6.9E-10 1.5E-14 124.6 23.0 151 184-337 237-388 (392)
131 TIGR00897 2A0118 polyol permea 99.2 7.8E-10 1.7E-14 124.9 23.4 156 180-337 239-400 (402)
132 PRK03699 putative transporter; 99.2 1E-09 2.3E-14 123.5 23.9 153 182-335 224-377 (394)
133 PRK03545 putative arabinose tr 99.2 8E-10 1.7E-14 124.1 22.9 151 186-337 229-379 (390)
134 PF06813 Nodulin-like: Nodulin 99.2 2.8E-10 6E-15 118.5 17.3 176 161-340 1-184 (250)
135 TIGR00902 2A0127 phenyl propri 99.2 1.1E-09 2.4E-14 122.8 22.6 148 185-334 227-375 (382)
136 PRK03893 putative sialic acid 99.2 3.3E-10 7.1E-15 131.3 18.3 148 182-330 294-445 (496)
137 KOG2325|consensus 99.2 2.5E-10 5.4E-15 128.1 15.3 174 161-336 32-227 (488)
138 PRK11551 putative 3-hydroxyphe 99.2 1.6E-09 3.6E-14 122.0 22.0 154 182-336 239-394 (406)
139 PRK09874 drug efflux system pr 99.2 8.4E-10 1.8E-14 124.3 19.3 136 200-336 260-396 (408)
140 TIGR00892 2A0113 monocarboxyla 99.2 1E-09 2.3E-14 126.0 19.8 148 184-332 262-415 (455)
141 PRK10489 enterobactin exporter 99.2 1.6E-09 3.4E-14 122.9 20.8 155 182-337 242-398 (417)
142 KOG2816|consensus 99.1 2.2E-09 4.8E-14 121.9 20.8 127 208-340 72-201 (463)
143 TIGR00879 SP MFS transporter, 99.1 1E-09 2.2E-14 125.4 18.1 157 182-339 303-471 (481)
144 PF01770 Folate_carrier: Reduc 99.1 9.2E-08 2E-12 105.8 32.5 153 184-338 25-182 (412)
145 PRK03633 putative MFS family t 99.1 5.6E-09 1.2E-13 116.9 22.9 148 185-336 222-370 (381)
146 PRK09705 cynX putative cyanate 99.1 7.2E-09 1.6E-13 116.7 23.2 157 181-340 223-383 (393)
147 PF05631 DUF791: Protein of un 99.1 2.7E-08 5.8E-13 107.2 26.1 146 188-335 59-213 (354)
148 TIGR00893 2A0114 d-galactonate 99.1 4.7E-09 1E-13 116.4 21.2 152 183-336 235-397 (399)
149 TIGR00883 2A0106 metabolite-pr 99.1 1.8E-09 3.8E-14 120.2 17.7 148 180-328 236-391 (394)
150 PF03092 BT1: BT1 family; Int 99.1 2.4E-09 5.2E-14 121.9 18.7 153 183-337 10-174 (433)
151 TIGR01272 gluP glucose/galacto 99.1 1E-08 2.2E-13 111.6 23.0 152 170-324 147-301 (310)
152 PRK11128 putative 3-phenylprop 99.1 8.2E-09 1.8E-13 115.7 22.1 143 186-330 228-371 (382)
153 COG2814 AraJ Arabinose efflux 99.1 1E-08 2.2E-13 112.9 20.7 161 176-337 225-385 (394)
154 PRK12307 putative sialic acid 99.1 1.3E-08 2.8E-13 115.6 22.6 144 181-325 249-395 (426)
155 PRK09952 shikimate transporter 99.1 2.5E-08 5.4E-13 114.0 24.4 150 188-337 276-432 (438)
156 PRK11273 glpT sn-glycerol-3-ph 99.0 1.9E-08 4.1E-13 115.5 22.8 156 181-337 271-434 (452)
157 TIGR00891 2A0112 putative sial 99.0 8.5E-09 1.8E-13 115.5 19.2 135 187-322 263-400 (405)
158 PRK10077 xylE D-xylose transpo 99.0 1.6E-08 3.5E-13 116.6 21.7 156 183-338 291-457 (479)
159 TIGR00882 2A0105 oligosacchari 99.0 2.1E-08 4.5E-13 113.0 20.8 142 194-336 250-393 (396)
160 PRK11663 regulatory protein Uh 99.0 2.5E-08 5.5E-13 113.8 21.0 156 181-337 261-423 (434)
161 PF05977 MFS_3: Transmembrane 99.0 3.6E-08 7.8E-13 114.4 22.0 153 184-337 239-393 (524)
162 PRK15075 citrate-proton sympor 99.0 4.9E-08 1.1E-12 111.5 22.8 137 181-318 256-399 (434)
163 COG2271 UhpC Sugar phosphate p 99.0 1.4E-08 3.1E-13 110.5 16.9 173 160-336 253-432 (448)
164 PRK11010 ampG muropeptide tran 99.0 6.4E-08 1.4E-12 112.3 23.3 151 186-337 246-402 (491)
165 PLN00028 nitrate transmembrane 99.0 1.7E-08 3.6E-13 116.8 18.0 153 188-342 278-437 (476)
166 PRK10054 putative transporter; 98.9 3E-09 6.4E-14 119.9 11.1 144 658-804 7-151 (395)
167 PF11700 ATG22: Vacuole efflux 98.9 9.4E-08 2E-12 109.7 23.3 162 175-337 294-467 (477)
168 PRK10213 nepI ribonucleoside t 98.9 1.3E-07 2.7E-12 106.7 23.3 145 186-331 240-384 (394)
169 TIGR00900 2A0121 H+ Antiporter 98.9 5.7E-08 1.2E-12 107.0 20.0 131 184-315 232-365 (365)
170 PRK10091 MFS transport protein 98.9 8.4E-08 1.8E-12 107.5 21.3 148 186-336 223-374 (382)
171 TIGR00895 2A0115 benzoate tran 98.9 6.1E-08 1.3E-12 108.1 19.9 129 181-310 268-397 (398)
172 PRK10504 putative transporter; 98.9 5.6E-09 1.2E-13 120.4 11.1 146 657-805 9-154 (471)
173 PRK15402 multidrug efflux syst 98.9 1.4E-07 3E-12 106.6 22.0 149 186-335 238-392 (406)
174 TIGR02718 sider_RhtX_FptX side 98.9 1.9E-07 4.1E-12 104.9 22.5 145 187-332 232-385 (390)
175 TIGR00792 gph sugar (Glycoside 98.9 1.5E-07 3.2E-12 107.2 21.1 120 196-316 255-383 (437)
176 PRK10133 L-fucose transporter; 98.8 2.2E-07 4.7E-12 106.3 21.1 140 190-332 287-427 (438)
177 PRK10406 alpha-ketoglutarate t 98.8 5.1E-07 1.1E-11 103.0 23.5 154 182-337 262-423 (432)
178 TIGR00887 2A0109 phosphate:H+ 98.8 7.9E-08 1.7E-12 111.9 17.1 154 180-334 305-485 (502)
179 TIGR00711 efflux_EmrB drug res 98.8 1.7E-08 3.7E-13 116.5 11.3 143 660-805 4-146 (485)
180 TIGR00896 CynX cyanate transpo 98.8 3E-07 6.6E-12 101.7 20.4 133 181-315 215-350 (355)
181 COG2223 NarK Nitrate/nitrite t 98.8 1.2E-07 2.6E-12 103.5 16.5 165 169-337 224-400 (417)
182 TIGR00710 efflux_Bcr_CflA drug 98.8 4.4E-07 9.5E-12 101.1 21.7 135 186-322 229-370 (385)
183 PRK11902 ampG muropeptide tran 98.8 5.6E-07 1.2E-11 101.6 22.8 147 187-336 234-388 (402)
184 PRK09584 tppB putative tripept 98.8 9.7E-09 2.1E-13 119.3 8.5 157 646-804 8-169 (500)
185 TIGR00712 glpT glycerol-3-phos 98.8 1.6E-07 3.5E-12 107.3 18.4 156 182-338 270-433 (438)
186 PRK11646 multidrug resistance 98.8 1.7E-08 3.7E-13 114.0 10.1 141 661-804 13-154 (400)
187 PRK08633 2-acyl-glycerophospho 98.8 1.9E-07 4E-12 119.8 20.7 143 187-330 257-402 (1146)
188 KOG3098|consensus 98.8 5.9E-07 1.3E-11 101.0 21.6 106 203-310 55-161 (461)
189 TIGR02332 HpaX 4-hydroxyphenyl 98.8 1.7E-08 3.7E-13 114.5 9.4 141 661-804 11-151 (412)
190 PF01306 LacY_symp: LacY proto 98.8 3.7E-07 8E-12 101.6 19.5 143 196-339 257-401 (412)
191 PRK11195 lysophospholipid tran 98.8 2.2E-08 4.7E-13 112.8 9.9 142 658-805 3-144 (393)
192 TIGR00881 2A0104 phosphoglycer 98.8 1.6E-07 3.5E-12 103.8 16.5 132 188-320 242-379 (379)
193 PRK15462 dipeptide/tripeptide 98.8 2.3E-08 4.9E-13 114.8 9.7 145 658-804 9-157 (493)
194 TIGR00898 2A0119 cation transp 98.7 2.7E-07 6E-12 107.3 18.9 142 190-337 350-494 (505)
195 TIGR00924 yjdL_sub1_fam amino 98.7 2.5E-08 5.3E-13 115.3 9.6 144 659-804 11-160 (475)
196 PRK06814 acylglycerophosphoeth 98.7 2.6E-07 5.5E-12 118.5 19.8 145 188-333 251-417 (1140)
197 TIGR00886 2A0108 nitrite extru 98.7 2.8E-08 6E-13 110.1 9.2 141 659-803 2-144 (366)
198 PF07690 MFS_1: Major Facilita 98.7 2.1E-08 4.6E-13 109.9 7.5 137 665-804 3-140 (352)
199 COG2270 Permeases of the major 98.7 4.9E-07 1.1E-11 98.9 17.8 163 175-338 265-429 (438)
200 TIGR00894 2A0114euk Na(+)-depe 98.7 4.4E-07 9.6E-12 104.5 18.1 157 180-337 278-449 (465)
201 PRK10473 multidrug efflux syst 98.7 5.8E-08 1.3E-12 109.0 10.4 138 664-804 9-146 (392)
202 KOG2504|consensus 98.7 1.8E-07 4E-12 108.1 14.6 159 178-337 313-475 (509)
203 TIGR00885 fucP L-fucose:H+ sym 98.7 6.3E-08 1.4E-12 109.8 10.1 143 660-804 5-149 (410)
204 PRK14995 methyl viologen resis 98.6 8.1E-07 1.8E-11 103.3 18.6 127 185-312 281-412 (495)
205 KOG4686|consensus 98.6 8.7E-07 1.9E-11 91.2 16.0 170 162-337 267-442 (459)
206 PRK09848 glucuronide transport 98.6 1.5E-06 3.3E-11 99.6 19.7 130 186-316 251-391 (448)
207 COG0477 ProP Permeases of the 98.6 2.6E-06 5.7E-11 89.7 20.0 146 182-328 21-175 (338)
208 PRK15034 nitrate/nitrite trans 98.6 1.5E-07 3.3E-12 106.9 11.0 143 655-800 31-178 (462)
209 PF03825 Nuc_H_symport: Nucleo 98.6 5.7E-06 1.2E-10 93.2 23.5 151 186-336 230-393 (400)
210 PRK10207 dipeptide/tripeptide 98.6 1.4E-07 3E-12 109.3 10.7 146 658-804 14-162 (489)
211 PF06963 FPN1: Ferroportin1 (F 98.6 0.00019 4.1E-09 81.0 35.4 142 655-799 256-406 (432)
212 PRK11043 putative transporter; 98.6 4.9E-06 1.1E-10 93.7 22.8 134 184-318 224-362 (401)
213 PRK11102 bicyclomycin/multidru 98.6 1.1E-07 2.4E-12 105.9 8.8 125 677-804 10-134 (377)
214 TIGR00806 rfc RFC reduced fola 98.6 1.7E-07 3.7E-12 105.0 9.2 121 680-804 48-169 (511)
215 PRK11652 emrD multidrug resist 98.6 2.8E-07 6.1E-12 103.6 11.0 131 671-804 21-151 (394)
216 COG2807 CynX Cyanate permease 98.6 6.3E-06 1.4E-10 88.5 20.3 174 159-338 208-385 (395)
217 TIGR00903 2A0129 major facilit 98.5 5.5E-06 1.2E-10 92.5 20.7 150 179-335 208-362 (368)
218 KOG1330|consensus 98.5 1.4E-07 3.1E-12 103.8 7.7 142 659-803 34-175 (493)
219 PRK15403 multidrug efflux syst 98.5 2.6E-07 5.6E-12 104.8 10.1 127 675-804 33-159 (413)
220 PRK10429 melibiose:sodium symp 98.5 3.7E-06 8E-11 97.2 19.3 129 187-316 255-396 (473)
221 PF02487 CLN3: CLN3 protein; 98.5 2.8E-05 6.1E-10 86.2 24.9 129 204-338 65-195 (402)
222 TIGR00901 2A0125 AmpG-related 98.5 4.7E-06 1E-10 92.2 17.8 113 184-297 230-355 (356)
223 KOG0569|consensus 98.5 1.2E-05 2.5E-10 91.5 20.3 159 181-340 288-456 (485)
224 PF13347 MFS_2: MFS/sugar tran 98.4 4.9E-06 1.1E-10 94.8 17.4 128 187-316 249-387 (428)
225 COG0738 FucP Fucose permease [ 98.4 1.2E-05 2.6E-10 87.7 18.7 158 171-331 244-402 (422)
226 KOG3764|consensus 98.4 5.5E-07 1.2E-11 97.2 8.4 149 188-337 296-453 (464)
227 PRK09669 putative symporter Ya 98.4 2E-05 4.3E-10 90.3 21.7 119 197-316 263-391 (444)
228 KOG3762|consensus 98.4 2.5E-06 5.5E-11 95.4 11.8 148 189-337 397-546 (618)
229 TIGR01301 GPH_sucrose GPH fami 98.3 4E-06 8.7E-11 96.0 12.7 144 660-804 6-171 (477)
230 TIGR00880 2_A_01_02 Multidrug 98.3 3.8E-07 8.3E-12 85.2 3.2 102 700-804 5-106 (141)
231 TIGR00926 2A1704 Peptide:H+ sy 98.3 2.2E-05 4.8E-10 93.4 17.5 153 183-336 8-180 (654)
232 PTZ00207 hypothetical protein; 98.3 3.2E-06 7E-11 98.9 10.2 123 675-801 44-171 (591)
233 PRK11462 putative transporter; 98.2 0.0001 2.2E-09 84.9 22.4 120 196-316 261-390 (460)
234 KOG2615|consensus 98.2 1.8E-06 4E-11 92.7 6.4 113 689-805 64-176 (451)
235 KOG0637|consensus 98.2 2.5E-05 5.4E-10 86.2 15.1 124 185-309 54-201 (498)
236 TIGR00805 oat sodium-independe 98.2 8.7E-07 1.9E-11 105.8 3.6 130 673-804 48-227 (633)
237 KOG2532|consensus 98.2 2E-05 4.4E-10 90.1 14.3 156 181-337 276-446 (466)
238 COG2211 MelB Na+/melibiose sym 98.2 7.3E-05 1.6E-09 84.4 18.2 122 193-315 267-398 (467)
239 KOG4332|consensus 98.1 3.6E-05 7.9E-10 78.8 12.8 96 184-281 58-154 (454)
240 KOG0253|consensus 98.1 3.7E-05 8E-10 82.4 13.3 127 208-337 391-518 (528)
241 PF05978 UNC-93: Ion channel r 98.1 0.00018 3.9E-09 69.7 17.1 115 195-311 34-149 (156)
242 PF06609 TRI12: Fungal trichot 98.1 0.00027 5.8E-09 82.6 20.5 172 170-342 317-558 (599)
243 TIGR00788 fbt folate/biopterin 98.0 6.4E-05 1.4E-09 86.8 13.4 124 191-315 281-415 (468)
244 PF06779 DUF1228: Protein of u 98.0 5.3E-05 1.2E-09 64.9 9.2 76 179-254 8-83 (85)
245 KOG3574|consensus 98.0 0.0012 2.5E-08 71.4 21.2 145 655-799 262-419 (510)
246 KOG0252|consensus 97.9 1.2E-05 2.6E-10 88.6 4.4 174 163-337 304-497 (538)
247 TIGR00769 AAA ADP/ATP carrier 97.8 0.019 4E-07 65.9 29.3 125 187-312 27-190 (472)
248 KOG0255|consensus 97.8 2.9E-05 6.3E-10 90.9 6.5 112 688-803 113-224 (521)
249 PRK03612 spermidine synthase; 97.7 0.0045 9.7E-08 72.2 22.8 169 163-334 18-193 (521)
250 PF00083 Sugar_tr: Sugar (and 97.7 5.6E-06 1.2E-10 94.8 -1.3 108 694-804 47-157 (451)
251 TIGR00939 2a57 Equilibrative N 97.7 0.0042 9E-08 70.8 21.8 108 694-803 308-426 (437)
252 KOG2533|consensus 97.7 0.0004 8.7E-09 80.0 13.5 159 169-328 279-446 (495)
253 KOG0254|consensus 97.7 7E-05 1.5E-09 87.6 7.0 105 694-801 90-194 (513)
254 COG3104 PTR2 Dipeptide/tripept 97.6 4.3E-05 9.3E-10 85.7 4.7 150 654-804 16-174 (498)
255 PF03209 PUCC: PUCC protein; 97.6 0.0046 1E-07 68.3 20.1 147 187-334 233-394 (403)
256 PF12832 MFS_1_like: MFS_1 lik 97.6 0.0006 1.3E-08 57.8 9.8 64 175-238 12-75 (77)
257 KOG1479|consensus 97.5 0.029 6.3E-07 62.2 24.0 109 692-803 281-397 (406)
258 KOG3810|consensus 97.5 0.0024 5.2E-08 68.3 14.4 122 192-315 35-158 (433)
259 PF06813 Nodulin-like: Nodulin 97.4 0.00066 1.4E-08 71.0 9.3 124 673-800 17-146 (250)
260 PF12832 MFS_1_like: MFS_1 lik 97.3 0.00049 1.1E-08 58.3 5.4 70 663-734 5-74 (77)
261 KOG1237|consensus 97.2 0.062 1.3E-06 63.2 24.3 153 183-336 58-243 (571)
262 PF13000 Acatn: Acetyl-coenzym 97.2 0.1 2.3E-06 59.0 23.7 43 757-799 413-455 (544)
263 PF05978 UNC-93: Ion channel r 97.0 0.0022 4.7E-08 62.2 7.5 134 666-803 4-143 (156)
264 KOG3762|consensus 96.9 0.00044 9.5E-09 77.9 1.8 149 653-804 366-515 (618)
265 PF00854 PTR2: POT family; In 96.8 0.0082 1.8E-07 67.1 11.0 108 229-337 2-122 (372)
266 KOG2325|consensus 96.7 0.005 1.1E-07 70.0 8.4 142 660-804 36-184 (488)
267 KOG2816|consensus 96.6 0.02 4.3E-07 65.6 12.7 123 188-312 267-391 (463)
268 COG0477 ProP Permeases of the 96.6 0.015 3.3E-07 60.8 11.0 129 672-802 16-149 (338)
269 TIGR00926 2A1704 Peptide:H+ sy 96.5 0.0039 8.5E-08 74.5 6.7 129 674-803 3-142 (654)
270 PF05631 DUF791: Protein of un 96.1 0.027 5.9E-07 61.4 9.9 110 675-790 53-167 (354)
271 KOG2563|consensus 96.1 0.015 3.3E-07 64.7 7.9 169 171-340 274-452 (480)
272 PF03219 TLC: TLC ATP/ADP tran 96.0 4.3 9.4E-05 47.0 27.4 117 196-312 56-205 (491)
273 KOG3098|consensus 95.5 0.89 1.9E-05 51.9 19.1 100 207-307 288-408 (461)
274 PF06779 DUF1228: Protein of u 95.1 0.062 1.3E-06 46.2 6.4 72 675-749 9-80 (85)
275 KOG0637|consensus 95.1 0.059 1.3E-06 60.2 7.9 138 667-804 41-198 (498)
276 KOG3097|consensus 95.0 0.15 3.2E-06 54.6 9.9 72 208-281 68-139 (390)
277 PF07672 MFS_Mycoplasma: Mycop 94.7 0.6 1.3E-05 48.8 13.3 54 284-337 3-61 (267)
278 PF03092 BT1: BT1 family; Int 94.3 0.38 8.2E-06 55.0 12.3 120 195-315 252-382 (433)
279 PF02487 CLN3: CLN3 protein; 94.2 1.2 2.5E-05 50.0 15.4 110 197-311 280-395 (402)
280 PF03137 OATP: Organic Anion T 94.2 0.012 2.7E-07 68.9 -0.3 138 664-803 9-195 (539)
281 PF01733 Nucleoside_tran: Nucl 93.9 0.017 3.7E-07 62.8 0.2 107 697-805 186-304 (309)
282 COG4262 Predicted spermidine s 92.0 6 0.00013 43.0 15.6 117 158-279 6-132 (508)
283 COG3202 ATP/ADP translocase [E 91.7 29 0.00063 39.8 28.6 124 188-312 48-209 (509)
284 KOG3880|consensus 91.4 1.1 2.4E-05 47.8 9.3 132 201-337 65-198 (409)
285 PF01770 Folate_carrier: Reduc 90.7 0.58 1.3E-05 52.5 7.1 127 673-803 18-147 (412)
286 PF06963 FPN1: Ferroportin1 (F 90.3 12 0.00026 42.6 17.3 125 180-307 275-412 (432)
287 PRK03612 spermidine synthase; 88.6 1.9 4.2E-05 50.4 9.6 113 688-803 45-163 (521)
288 PF07672 MFS_Mycoplasma: Mycop 88.1 4.2 9E-05 42.6 10.5 94 200-294 143-249 (267)
289 TIGR00769 AAA ADP/ATP carrier 87.1 65 0.0014 37.3 23.5 70 260-329 274-345 (472)
290 PRK10263 DNA translocase FtsK; 78.9 19 0.00041 46.0 12.5 22 206-227 60-81 (1355)
291 PF03219 TLC: TLC ATP/ADP tran 78.0 1.4E+02 0.0031 34.6 23.4 71 261-331 291-363 (491)
292 KOG3626|consensus 76.8 2.3 5E-05 51.0 3.8 133 667-801 106-289 (735)
293 TIGR00939 2a57 Equilibrative N 70.1 1.3E+02 0.0029 34.4 15.9 107 201-309 310-430 (437)
294 COG1230 CzcD Co/Zn/Cd efflux s 66.6 1.5E+02 0.0033 31.9 14.3 40 285-324 153-192 (296)
295 PF06912 DUF1275: Protein of u 66.1 1.5E+02 0.0033 29.9 20.5 37 289-326 164-200 (209)
296 KOG1237|consensus 65.1 23 0.0005 42.0 8.6 129 671-800 50-209 (571)
297 KOG3574|consensus 64.2 22 0.00049 39.4 7.5 140 658-802 31-186 (510)
298 KOG2601|consensus 56.9 3.3E+02 0.0071 30.6 19.7 118 209-327 74-215 (503)
299 TIGR00844 c_cpa1 na(+)/h(+) an 55.6 1.9E+02 0.0041 35.6 13.9 34 294-327 108-141 (810)
300 KOG3880|consensus 54.6 43 0.00092 36.3 7.4 107 198-309 288-400 (409)
301 PF00854 PTR2: POT family; In 52.9 14 0.00029 41.2 3.8 78 726-803 2-90 (372)
302 KOG4830|consensus 51.9 22 0.00048 37.3 4.7 142 652-797 195-343 (412)
303 PF12805 FUSC-like: FUSC-like 48.6 1.1E+02 0.0024 32.6 9.9 36 232-267 3-38 (284)
304 COG4721 ABC-type cobalt transp 44.0 3.2E+02 0.0069 26.7 15.0 59 258-327 97-161 (192)
305 TIGR01667 YCCS_YHJK integral m 44.0 1.5E+02 0.0033 36.1 11.0 52 216-267 41-96 (701)
306 PF11299 DUF3100: Protein of u 43.9 32 0.00068 35.4 4.3 50 260-309 179-228 (241)
307 PF11947 DUF3464: Protein of u 43.6 87 0.0019 30.2 7.0 35 268-302 110-145 (153)
308 TIGR01666 YCCS hypothetical me 43.1 1.7E+02 0.0036 35.7 11.1 49 218-266 43-95 (704)
309 PRK15015 carbon starvation pro 42.2 3.8E+02 0.0083 32.2 13.2 281 206-800 9-299 (701)
310 COG2119 Predicted membrane pro 41.0 2E+02 0.0044 28.6 9.2 56 188-243 124-179 (190)
311 PF13000 Acatn: Acetyl-coenzym 40.9 4.3E+02 0.0094 30.8 13.1 57 258-314 411-468 (544)
312 COG4262 Predicted spermidine s 40.8 1.9E+02 0.0042 31.9 9.8 89 688-776 38-132 (508)
313 COG2076 EmrE Membrane transpor 38.9 3E+02 0.0064 24.9 10.7 54 217-270 19-72 (106)
314 COG3202 ATP/ADP translocase [E 36.6 7.4E+02 0.016 28.8 17.3 72 262-333 294-368 (509)
315 PF13782 SpoVAB: Stage V sporu 35.0 2.5E+02 0.0055 25.5 8.1 47 258-305 54-105 (110)
316 PF01733 Nucleoside_tran: Nucl 34.7 16 0.00034 39.7 0.6 106 202-308 186-305 (309)
317 COG5336 Uncharacterized protei 32.6 1.3E+02 0.0029 27.0 5.8 17 209-225 53-69 (116)
318 KOG3097|consensus 32.5 72 0.0016 34.9 5.0 109 659-777 30-138 (390)
319 KOG4332|consensus 30.6 7E+02 0.015 26.8 13.7 57 259-315 254-310 (454)
320 TIGR02185 Trep_Strep conserved 30.5 3.2E+02 0.0069 27.4 9.1 39 701-741 38-76 (189)
321 PF03547 Mem_trans: Membrane t 30.5 7.7E+02 0.017 27.2 23.3 23 652-674 239-261 (385)
322 PF02554 CstA: Carbon starvati 29.0 8.5E+02 0.018 27.2 15.7 40 279-322 48-89 (376)
323 PRK00293 dipZ thiol:disulfide 28.8 1E+03 0.023 28.2 19.1 11 259-269 296-306 (571)
324 PF10225 DUF2215: Uncharacteri 28.7 4.7E+02 0.01 27.5 10.4 23 277-300 57-79 (249)
325 PRK09541 emrE multidrug efflux 28.7 4.4E+02 0.0096 23.8 10.8 10 285-294 56-65 (110)
326 COG2962 RarD Predicted permeas 28.3 3.2E+02 0.0069 29.3 8.9 80 654-743 65-145 (293)
327 KOG1479|consensus 27.9 3E+02 0.0066 31.1 9.2 106 200-307 284-399 (406)
328 TIGR03173 pbuX xanthine permea 27.4 9.2E+02 0.02 27.1 14.7 51 187-237 16-67 (406)
329 PTZ00265 multidrug resistance 27.0 1.5E+03 0.032 30.5 16.8 19 314-332 195-213 (1466)
330 PF13536 EmrE: Multidrug resis 26.5 3.1E+02 0.0067 24.5 7.7 22 722-743 86-107 (113)
331 PF11947 DUF3464: Protein of u 26.1 1.1E+02 0.0023 29.6 4.5 35 765-799 110-144 (153)
332 PF05884 ZYG-11_interact: Inte 24.6 9E+02 0.02 26.0 12.9 13 282-294 214-226 (299)
333 TIGR02916 PEP_his_kin putative 24.5 1.3E+03 0.028 27.9 16.7 35 285-319 226-262 (679)
334 TIGR02865 spore_II_E stage II 24.5 7.2E+02 0.016 30.7 12.5 41 260-300 191-231 (764)
335 COG4858 Uncharacterized membra 24.0 7.3E+02 0.016 24.8 9.7 23 260-282 131-153 (226)
336 PF02990 EMP70: Endomembrane p 23.8 2.5E+02 0.0054 33.0 8.1 45 279-323 289-336 (521)
337 COG2274 SunT ABC-type bacterio 23.8 1.4E+03 0.031 28.0 16.3 32 305-336 282-313 (709)
338 KOG3810|consensus 23.6 4.7E+02 0.01 29.2 9.2 93 201-294 274-369 (433)
339 PF11023 DUF2614: Protein of u 23.6 1.2E+02 0.0026 27.5 4.0 21 722-742 8-28 (114)
340 PF07760 DUF1616: Protein of u 23.4 5E+02 0.011 27.8 9.8 25 258-283 25-49 (287)
341 PRK12585 putative monovalent c 22.5 4.6E+02 0.0099 26.3 8.2 18 180-197 23-41 (197)
342 COG1079 Uncharacterized ABC-ty 22.5 1E+03 0.022 25.8 13.2 94 210-308 19-115 (304)
343 PF12670 DUF3792: Protein of u 22.2 6E+02 0.013 23.1 11.7 46 292-337 43-88 (116)
344 PF09527 ATPase_gene1: Putativ 21.8 3.8E+02 0.0082 20.7 7.0 35 206-240 8-43 (55)
345 PLN03140 ABC transporter G fam 21.8 1.7E+03 0.037 29.9 15.9 27 304-330 692-722 (1470)
346 COG5336 Uncharacterized protei 21.8 2.9E+02 0.0064 24.9 6.0 32 283-314 38-69 (116)
347 COG1268 BioY Uncharacterized c 21.7 2.4E+02 0.0052 28.2 6.2 24 204-227 88-111 (184)
348 PRK02237 hypothetical protein; 21.6 1.4E+02 0.0031 26.8 4.1 85 649-743 21-106 (109)
349 PLN03140 ABC transporter G fam 21.4 9.3E+02 0.02 32.4 13.3 28 305-332 1371-1402(1470)
350 TIGR00927 2A1904 K+-dependent 21.3 2.9E+02 0.0064 34.5 7.9 46 186-233 956-1001(1096)
351 PF11833 DUF3353: Protein of u 20.9 3.6E+02 0.0077 27.2 7.4 30 283-312 137-166 (194)
352 PF02694 UPF0060: Uncharacteri 20.4 1.8E+02 0.0039 26.2 4.4 50 198-247 54-103 (107)
353 PF13829 DUF4191: Domain of un 20.3 2.3E+02 0.005 29.2 5.9 50 284-336 22-71 (224)
354 PF06123 CreD: Inner membrane 20.2 4.3E+02 0.0094 30.1 8.7 13 324-336 11-23 (430)
355 PRK02935 hypothetical protein; 20.2 1.6E+02 0.0034 26.4 4.0 22 722-743 9-30 (110)
No 1
>KOG2504|consensus
Probab=100.00 E-value=3.1e-33 Score=320.14 Aligned_cols=407 Identities=40% Similarity=0.783 Sum_probs=331.7
Q ss_pred CCCCchhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHH
Q psy10046 155 IPDGGWGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVA 234 (805)
Q Consensus 155 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~ 234 (805)
.|++.|.|.+++++++..+..++..+.++++.+.++++|+.+..+++|+.++....+.+..++.+.+.||+|.|.+.++|
T Consensus 38 ~PdGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G 117 (509)
T KOG2504|consen 38 LPDGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAG 117 (509)
T ss_pred CCCCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc
Q psy10046 235 GIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEY 314 (805)
Q Consensus 235 ~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~ 314 (805)
.++.+++.++.+++++++++++.+.++.|+|.|..+.....++..||.|+|+.+.|+...+.++|.++.|++..++.+.+
T Consensus 118 ~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~ 197 (509)
T KOG2504|consen 118 GLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY 197 (509)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhh
Q psy10046 315 GWRGTVLLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIET 394 (805)
Q Consensus 315 gWr~~f~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (805)
|||+.+++.+.+.+.+++....++|..+...+. ..++.+. .
T Consensus 198 G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-~~~~~~~--~------------------------------------ 238 (509)
T KOG2504|consen 198 GWRGALLIFGGISLNVLVAGALLRPLSPPKKPN-EEKDLRN--S------------------------------------ 238 (509)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch-hhhhhcc--c------------------------------------
Confidence 999999999999988888888887754332222 0000000 0
Q ss_pred hhhccccccccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCC
Q psy10046 395 SVATELNAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRAS 474 (805)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (805)
..+.+......
T Consensus 239 ---------------------------~~~~~~~~~~~------------------------------------------ 249 (509)
T KOG2504|consen 239 ---------------------------AASVESTPKPV------------------------------------------ 249 (509)
T ss_pred ---------------------------ccccccccccc------------------------------------------
Confidence 00000000000
Q ss_pred CCCCCcccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchh
Q psy10046 475 EPRGKPLVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWV 554 (805)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (805)
..+..+++.. +.+ ++.+ +. ...+
T Consensus 250 --~~~~~~~~~~------~~~-------------~~~~---~~-----------------------~~~~---------- 272 (509)
T KOG2504|consen 250 --ELRISERDSG------LKK-------------LSLS---NL-----------------------ATLK---------- 272 (509)
T ss_pred --ccccccCCCC------CCc-------------cccc---ch-----------------------hhhh----------
Confidence 0000000000 000 0000 00 0000
Q ss_pred hhhhcCCCccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheecccccccccccc
Q psy10046 555 QILVNGGHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTE 634 (805)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (805)
..
T Consensus 273 ------------------------------------------------------------------------------~~ 274 (509)
T KOG2504|consen 273 ------------------------------------------------------------------------------RG 274 (509)
T ss_pred ------------------------------------------------------------------------------hC
Confidence 00
Q ss_pred CccchhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheee
Q psy10046 635 NTSWMDDARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALG 714 (805)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g 714 (805)
+..+...-.+....++++++|+++.|+.+++...++.+++..+.+++|.|..+.|++..+++.++++.++.+++||++.|
T Consensus 275 ~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G 354 (509)
T KOG2504|consen 275 PDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILG 354 (509)
T ss_pred CccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhh
Confidence 00000000011112566899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHH
Q psy10046 715 WACDQPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQ 794 (805)
Q Consensus 715 ~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~ 794 (805)
++.|++...++.+..+++++++++.+.++ ..++++.++.+++++|++.|......+.++.++++.++.+.++|+..+++
T Consensus 355 ~laD~~~~~~~~~~~~~ll~~gl~~~~~p-~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~ 433 (509)
T KOG2504|consen 355 LLADKPGIRALVLFLLTLLIAGLARLFLP-FATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQ 433 (509)
T ss_pred hhcCccccchHHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHh
Confidence 99999767788888899999999998888 67888999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCC
Q psy10046 795 GIGNLVGPPLA 805 (805)
Q Consensus 795 ~ig~~igp~ia 805 (805)
+++.++||+|+
T Consensus 434 gi~~l~gpPia 444 (509)
T KOG2504|consen 434 GIGALVGPPIA 444 (509)
T ss_pred HHHHHcCcccc
Confidence 99999999985
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.1e-31 Score=318.49 Aligned_cols=204 Identities=15% Similarity=0.165 Sum_probs=171.1
Q ss_pred CCCCchhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHH
Q psy10046 155 IPDGGWGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVA 234 (805)
Q Consensus 155 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~ 234 (805)
.+.+++.|.++++++++.++.......++.++|.+.+++|++..+.+++.+++.++++++.+++|+++||+|||++++++
T Consensus 159 ~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~ 238 (742)
T TIGR01299 159 CGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLIC 238 (742)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 34455678777776666654433335577788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhc
Q psy10046 235 GIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISE 313 (805)
Q Consensus 235 ~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~ 313 (805)
+++++++.++++++++++.+++ +|++.|++.|+..+...+++.+++| ++||++++++.++..+|.++++.++.++...
T Consensus 239 lil~~i~~ll~afa~s~~~llv-~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~ 317 (742)
T TIGR01299 239 LSVNGFFAFFSSFVQGYGFFLF-CRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPH 317 (742)
T ss_pred HHHHHHHHHHHHHHhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999866 6999999999999999999999998 7799999999999999999999988777653
Q ss_pred -------------cchHHHHHHHHHHHHHHHHHHH-hccCCchhhhhhchHHHHHhhhcc
Q psy10046 314 -------------YGWRGTVLLLSGTFFNLCVCGA-IMRDPEWWTLEQNKEKDLKSIKGA 359 (805)
Q Consensus 314 -------------~gWr~~f~i~~~~~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~l~~~ 359 (805)
.+||+.|++.++..++.+++.+ +..+|+|+..+++.+++.+.+++.
T Consensus 318 ~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i 377 (742)
T TIGR01299 318 YGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLI 377 (742)
T ss_pred ccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHH
Confidence 3589988887766655544443 345688988888888888877663
No 3
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1.9e-30 Score=297.30 Aligned_cols=377 Identities=32% Similarity=0.606 Sum_probs=288.0
Q ss_pred CCCCchhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHH
Q psy10046 155 IPDGGWGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVA 234 (805)
Q Consensus 155 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~ 234 (805)
.|++.|+|.+++++++..+..++....++.++|.+.+++|++..+++++.+++.++..++.+++|+++||+|||++++++
T Consensus 11 ~~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~ 90 (455)
T TIGR00892 11 PPDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAG 90 (455)
T ss_pred CCCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhh
Confidence 36777899888888887776666667788889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc
Q psy10046 235 GIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEY 314 (805)
Q Consensus 235 ~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~ 314 (805)
.+++++++++++++++++.+++..|++.|++.+...+....++.++++++|++++++...+..+|.+++|++++++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~ 170 (455)
T TIGR00892 91 GLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESF 170 (455)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988665579999998877667777778899989999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhh
Q psy10046 315 GWRGTVLLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIET 394 (805)
Q Consensus 315 gWr~~f~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (805)
|||+.|++.+++.+++.+..++.+++....... .. +
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~---~---------------------------------------- 206 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGALMRPVGPSQRVS-KS---K---------------------------------------- 206 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCcccccc-cc---c----------------------------------------
Confidence 999999999987776655555543321000000 00 0
Q ss_pred hhhccccccccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCC
Q psy10046 395 SVATELNAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRAS 474 (805)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (805)
..++. +. +....
T Consensus 207 ------------------------~~~~~-----------------~~---------~~~~~------------------ 218 (455)
T TIGR00892 207 ------------------------SKEGL-----------------PP---------DGSTK------------------ 218 (455)
T ss_pred ------------------------ccccC-----------------CC---------CCccc------------------
Confidence 00000 00 00000
Q ss_pred CCCCCcccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchh
Q psy10046 475 EPRGKPLVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWV 554 (805)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (805)
+. ...
T Consensus 219 ----------------------------------------~~----------------------~~~------------- 223 (455)
T TIGR00892 219 ----------------------------------------KL----------------------SKK------------- 223 (455)
T ss_pred ----------------------------------------cc----------------------ccc-------------
Confidence 00 000
Q ss_pred hhhhcCCCccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheecccccccccccc
Q psy10046 555 QILVNGGHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTE 634 (805)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (805)
T Consensus 224 -------------------------------------------------------------------------------- 223 (455)
T TIGR00892 224 -------------------------------------------------------------------------------- 223 (455)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccchhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheee
Q psy10046 635 NTSWMDDARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALG 714 (805)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g 714 (805)
...+...+..++++++++.++.+++..++...++.....++|.|+++.|++..+++++.++.+++.+++++++|
T Consensus 224 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g 297 (455)
T TIGR00892 224 ------STAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCG 297 (455)
T ss_pred ------chhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011222356788889888888777777877888899999998999999999999999999999999999
Q ss_pred eecCCCCccchhHHH--HHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHH
Q psy10046 715 WACDQPWLNVKKTYA--ACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLL 792 (805)
Q Consensus 715 ~l~dr~~~gr~~~~~--~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~ 792 (805)
++.||.++++++... .+.++.+++++++. ..++.+.+++..+++|++.+...+....++.+.+|++++++++|++++
T Consensus 298 ~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~-~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 376 (455)
T TIGR00892 298 LIAGLKWIRPHVQYLFSFALLFNGLTHLLCA-LAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTI 376 (455)
T ss_pred HHhcccccCHHHHHHHHHHHHHHHHHHHHHH-HhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHH
Confidence 999974344343332 23333344444433 345677777788899999998888989999999999999999999999
Q ss_pred HHhhhhccCCCCC
Q psy10046 793 AQGIGNLVGPPLA 805 (805)
Q Consensus 793 ~~~ig~~igp~ia 805 (805)
+..+|+++||+++
T Consensus 377 ~~~lg~~igp~i~ 389 (455)
T TIGR00892 377 VECCAVLIGPPLA 389 (455)
T ss_pred HHHHHHHccccce
Confidence 9999999999864
No 4
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.98 E-value=3.6e-30 Score=298.22 Aligned_cols=398 Identities=14% Similarity=0.155 Sum_probs=293.0
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q psy10046 161 GWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGV 240 (805)
Q Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i 240 (805)
+|..++.+++..++........++.+|.+.+++|.+..+.+|+.+.|.++++++.+++|+++||+|||++++++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 46777777777777766667888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-c-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHH
Q psy10046 241 GFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWF-E-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRG 318 (805)
Q Consensus 241 ~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~-p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~ 318 (805)
+++++++++|++.+++ +|+++|+|.+...+.....+..++ | ++|+++++++.....+|.++||++++++.++.||||
T Consensus 84 ~~~~~~~a~~~~~li~-~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~ 162 (495)
T PRK14995 84 ASLAAAFSPTASWLIA-TRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGS 162 (495)
T ss_pred HHHHHHHcCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHH
Confidence 9999999999999966 699999999998888877777554 5 789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhc
Q psy10046 319 TVLLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVAT 398 (805)
Q Consensus 319 ~f~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (805)
.|++...+.++.+++.+++.+.... +. .++. +.. ...+..
T Consensus 163 ~f~i~~~~~~~~~~l~~~~l~~~~~----~~--------------------~~~~-d~~--g~~~~~------------- 202 (495)
T PRK14995 163 VFLINVPIVLVVMGLTARYVPRQAG----RR--------------------DQPL-NLG--HALMLI------------- 202 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCC----CC--------------------CCCC-ChH--hHHHHH-------------
Confidence 9999887776666555554332100 00 0000 000 000000
Q ss_pred cccccccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCC
Q psy10046 399 ELNAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRG 478 (805)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (805)
T Consensus 203 -------------------------------------------------------------------------------- 202 (495)
T PRK14995 203 -------------------------------------------------------------------------------- 202 (495)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhh
Q psy10046 479 KPLVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILV 558 (805)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (805)
... ..+.
T Consensus 203 -------------------------------------------------------------------~~~------~~l~ 209 (495)
T PRK14995 203 -------------------------------------------------------------------VAI------LLLV 209 (495)
T ss_pred -------------------------------------------------------------------HHH------HHHH
Confidence 000 0000
Q ss_pred cCCCccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccc
Q psy10046 559 NGGHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSW 638 (805)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (805)
.+ +. .. . ...+........+...+..... +
T Consensus 210 ~~-------------~~---------------~~----~--------~~~~~~~~~~~~~~~~~~~l~~----------f 239 (495)
T PRK14995 210 YS-------------AK---------------TA----L--------KGFLSLWVTSLTLLTGALLLGL----------F 239 (495)
T ss_pred HH-------------HH---------------hc----c--------ccCCchHHHHHHHHHHHHHHHH----------H
Confidence 00 00 00 0 0000000000000000000000 0
Q ss_pred hhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeec
Q psy10046 639 MDDARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWAC 717 (805)
Q Consensus 639 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~ 717 (805)
.....+..+++++++++|++.++..++..++....+....+++|.|++. +|+++.+++++..+..++..++.++.|++.
T Consensus 240 ~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~ 319 (495)
T PRK14995 240 IRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILV 319 (495)
T ss_pred HHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001112356778899999999888888888777777788899999987 799999999999999999999999999999
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhhhhh--hhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHh
Q psy10046 718 DQPWLNVKKTYAACLIGCGVSTALMPLF--ATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQG 795 (805)
Q Consensus 718 dr~~~gr~~~~~~~~~~~~i~~l~~~~~--~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ 795 (805)
|| +++|+.+..+.++.+++++++... .++.+...+..++.|++.|..++.....+.+.+|+++++.+.|+.++++.
T Consensus 320 ~r--~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 397 (495)
T PRK14995 320 SR--LGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYE 397 (495)
T ss_pred HH--cCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHH
Confidence 99 898888877777766665544322 23455566678888999999888888888899999999999999999999
Q ss_pred hhhccCCCC
Q psy10046 796 IGNLVGPPL 804 (805)
Q Consensus 796 ig~~igp~i 804 (805)
+|+.+|+.+
T Consensus 398 lG~~~G~ai 406 (495)
T PRK14995 398 LGAGLGIAI 406 (495)
T ss_pred HHHHHHHHH
Confidence 999988754
No 5
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.2e-29 Score=274.21 Aligned_cols=341 Identities=19% Similarity=0.208 Sum_probs=284.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHH
Q psy10046 162 WMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVG 241 (805)
Q Consensus 162 w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~ 241 (805)
|..++...+..|..-..-+....++|.+.+|||+|...+|+..|+|.++++++.++...+.+|+.||++++..+.++.++
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 55555555566644444466677789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHH
Q psy10046 242 FVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTV 320 (805)
Q Consensus 242 ~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f 320 (805)
.+++++++||+.+++ .|++.|+..|.+++...++..+..| ++|++++++...+..++.++|.+++.++.+.+|||+.|
T Consensus 92 n~l~alAp~f~~Ll~-aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F 170 (394)
T COG2814 92 NLLSALAPSFAVLLL-ARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATF 170 (394)
T ss_pred HHHHHHhccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHH
Confidence 999999999999977 5999999999999999999998886 78999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhccc
Q psy10046 321 LLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATEL 400 (805)
Q Consensus 321 ~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (805)
++.+.++++.++..+...||+.....
T Consensus 171 ~~ia~l~ll~~~~~~~~lP~~~~~~~------------------------------------------------------ 196 (394)
T COG2814 171 LAIAVLALLALLLLWKLLPPSEISGS------------------------------------------------------ 196 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCccCCCC------------------------------------------------------
Confidence 99999998888888776663100000
Q ss_pred cccccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCc
Q psy10046 401 NAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKP 480 (805)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (805)
+
T Consensus 197 ----------------------------------------~--------------------------------------- 197 (394)
T COG2814 197 ----------------------------------------L--------------------------------------- 197 (394)
T ss_pred ----------------------------------------C---------------------------------------
Confidence 0
Q ss_pred ccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcC
Q psy10046 481 LVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNG 560 (805)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (805)
+..
T Consensus 198 -----------------------------------------------------------~~~------------------ 200 (394)
T COG2814 198 -----------------------------------------------------------PGP------------------ 200 (394)
T ss_pred -----------------------------------------------------------Ccc------------------
Confidence 000
Q ss_pred CCccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchh
Q psy10046 561 GHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMD 640 (805)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (805)
T Consensus 201 -------------------------------------------------------------------------------- 200 (394)
T COG2814 201 -------------------------------------------------------------------------------- 200 (394)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCC
Q psy10046 641 DARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQ 719 (805)
Q Consensus 641 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr 719 (805)
. .-.++++|+|..+...+..++.+.+.+..++|+..++++ .|++....++++..++++.++|.+++|++.||
T Consensus 201 -~------~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr 273 (394)
T COG2814 201 -L------RTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR 273 (394)
T ss_pred -h------hHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 0 001367899999999999999999999999999999987 79999999999999999999999999999999
Q ss_pred CCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhc
Q psy10046 720 PWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNL 799 (805)
Q Consensus 720 ~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~ 799 (805)
+.++.+....++.++.++.+.+...+.+...+..+++|+..+..........++ .-++....+.++.....++|..
T Consensus 274 ---~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia 349 (394)
T COG2814 274 ---GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIA 349 (394)
T ss_pred ---cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHH
Confidence 566666667667767766666566777777777777888777766666667776 4468888999998888888887
Q ss_pred cCCCC
Q psy10046 800 VGPPL 804 (805)
Q Consensus 800 igp~i 804 (805)
+|..+
T Consensus 350 ~GA~l 354 (394)
T COG2814 350 LGAAL 354 (394)
T ss_pred HHHHH
Confidence 76543
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.97 E-value=5.7e-29 Score=281.51 Aligned_cols=176 Identities=18% Similarity=0.219 Sum_probs=155.8
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q psy10046 161 GWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGV 240 (805)
Q Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i 240 (805)
+|.+++.+++..++.+......+...|.+.+++|++..+++++.+++.+++++++++.|+++||+|||+++.++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 56677777766666566667788888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhh------c
Q psy10046 241 GFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLIS------E 313 (805)
Q Consensus 241 ~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~------~ 313 (805)
+++++++++|++.+++ .|++.|++.+...+....++.+|+| ++|+++++++..+..+|.++++++++++.. .
T Consensus 86 ~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 164 (412)
T TIGR02332 86 ASTATMFATGPESLYL-LRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMAL 164 (412)
T ss_pred HHHHHHHhcCHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999866 6999999999998888888999998 679999999999999999999999998874 3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 314 YGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 314 ~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
.|||+.|++.+++.++.+++.+++
T Consensus 165 ~gwr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 165 KGWQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhc
Confidence 699999999888777665555544
No 7
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=1.5e-29 Score=280.00 Aligned_cols=343 Identities=22% Similarity=0.286 Sum_probs=266.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy10046 166 LAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLS 245 (805)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~ 245 (805)
+..++...+..+..+.++++.|.+.+++|++..+++++.+++.++++++.+++|+++||+|||++++++.++++++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~ 85 (377)
T TIGR00890 6 LVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFY 85 (377)
T ss_pred eHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHH
Confidence 33344444455667788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHH
Q psy10046 246 CFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSG 325 (805)
Q Consensus 246 a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~ 325 (805)
+++++++.+++ .|++.|++.+..++.....+.+++|++|+++++++..+..+|.++++++.+.+.+..|||+.|++.++
T Consensus 86 ~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~ 164 (377)
T TIGR00890 86 AIADSLAALYL-TYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGI 164 (377)
T ss_pred HHHHHHHHHHH-HHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHH
Confidence 99999999966 69999999998888888888899999999999999999999998888888888888899999999988
Q ss_pred HHHHHHHHHHhcc-CCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhccccccc
Q psy10046 326 TFFNLCVCGAIMR-DPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAET 404 (805)
Q Consensus 326 ~~~~~~i~~~~~~-~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (805)
+.++.+++.+++. .|+. ++..+ +
T Consensus 165 ~~~~~~~~~~~~~~~~~~-------~~~~~---~---------------------------------------------- 188 (377)
T TIGR00890 165 IFLLVIVLGAFLIGYPPG-------QLIKT---N---------------------------------------------- 188 (377)
T ss_pred HHHHHHHHHHHheecCch-------hcccc---C----------------------------------------------
Confidence 7777666555432 1210 00000 0
Q ss_pred cccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCccccc
Q psy10046 405 CKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKN 484 (805)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (805)
.+ ..+
T Consensus 189 ------------------------------------~~-----------~~~---------------------------- 193 (377)
T TIGR00890 189 ------------------------------------IE-----------VSV---------------------------- 193 (377)
T ss_pred ------------------------------------cc-----------cch----------------------------
Confidence 00 000
Q ss_pred CCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCcc
Q psy10046 485 HSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRF 564 (805)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (805)
+
T Consensus 194 -----------------------------------------------------------~-------------------- 194 (377)
T TIGR00890 194 -----------------------------------------------------------K-------------------- 194 (377)
T ss_pred -----------------------------------------------------------h--------------------
Confidence 0
Q ss_pred ccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHH
Q psy10046 565 QDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARE 644 (805)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (805)
..+
T Consensus 195 --------------------------------------------------------------------------~~~--- 197 (377)
T TIGR00890 195 --------------------------------------------------------------------------DYT--- 197 (377)
T ss_pred --------------------------------------------------------------------------hhh---
Confidence 000
Q ss_pred HHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccc
Q psy10046 645 LIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNV 724 (805)
Q Consensus 645 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr 724 (805)
..+.++++.++.+.+..++..........+.+.|.++.|.+..+++.+.+..+++.++++++.|++.|| ++|
T Consensus 198 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr--~g~ 269 (377)
T TIGR00890 198 ------VWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDK--IGR 269 (377)
T ss_pred ------HHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhh
Confidence 013345666666665555554454445556677777889998888999999999999999999999999 999
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhh-hHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 725 KKTYAACLIGCGVSTALMPLFAT-NYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 725 ~~~~~~~~~~~~i~~l~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
|+.+.++.++.+++++++..... ....+....++.|++.+..++..+.++.|.+|+++++++.|+.+.+..+|++++|.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~ 349 (377)
T TIGR00890 270 QKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGL 349 (377)
T ss_pred hhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHH
Confidence 99888888877777666553221 22223344566778888778888889999999999999999999999999999886
Q ss_pred C
Q psy10046 804 L 804 (805)
Q Consensus 804 i 804 (805)
+
T Consensus 350 ~ 350 (377)
T TIGR00890 350 I 350 (377)
T ss_pred H
Confidence 4
No 8
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=2e-28 Score=276.12 Aligned_cols=352 Identities=17% Similarity=0.184 Sum_probs=273.4
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISG 239 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~ 239 (805)
++|.+++.+++..++........++..|.+.+++|.+..+++++.+++.++..++.+++|+++||+|||++++++.++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 91 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFG 91 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 67888888887777665556778888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHH
Q psy10046 240 VGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRG 318 (805)
Q Consensus 240 i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~ 318 (805)
++.++++++++++.+++ .|++.|++.+...+...+++.+++| ++|+++++++..+..+|..+++.+++.+.+..+||+
T Consensus 92 ~~~~~~~~~~~~~~~~~-~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 170 (406)
T PRK11551 92 LFSLATAQAWDFPSLLV-ARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRH 170 (406)
T ss_pred HHHHHHHHhccHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHH
Confidence 99999999999999866 6999999999999999999999997 779999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhc
Q psy10046 319 TVLLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVAT 398 (805)
Q Consensus 319 ~f~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (805)
.|++.+++.++.+++.+++.+..... ...+ ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~--~~---------------------------------------- 202 (406)
T PRK11551 171 IFYVGGVGPLLLVPLLMRWLPESRAF------AQAA--GA---------------------------------------- 202 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhH------Hhcc--Cc----------------------------------------
Confidence 99988776555554444332221000 0000 00
Q ss_pred cccccccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCC
Q psy10046 399 ELNAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRG 478 (805)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (805)
+ .+
T Consensus 203 -------------------------------------------~------------~~---------------------- 205 (406)
T PRK11551 203 -------------------------------------------G------------KQ---------------------- 205 (406)
T ss_pred -------------------------------------------c------------hh----------------------
Confidence 0 00
Q ss_pred CcccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhh
Q psy10046 479 KPLVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILV 558 (805)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (805)
...
T Consensus 206 ------------------------------------------------------------~~~----------------- 208 (406)
T PRK11551 206 ------------------------------------------------------------RAP----------------- 208 (406)
T ss_pred ------------------------------------------------------------hhh-----------------
Confidence 000
Q ss_pred cCCCccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccc
Q psy10046 559 NGGHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSW 638 (805)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (805)
T Consensus 209 -------------------------------------------------------------------------------- 208 (406)
T PRK11551 209 -------------------------------------------------------------------------------- 208 (406)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecC
Q psy10046 639 MDDARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACD 718 (805)
Q Consensus 639 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~d 718 (805)
. .+..+ +..+.+..+.+.+..++.....+....|+|.|+++.|++...++.+....+++.++++++.|++.|
T Consensus 209 ---~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 280 (406)
T PRK11551 209 ---V---LRALF--GEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMD 280 (406)
T ss_pred ---h---HHHHh--hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000 000111122222333333444555667889999999999999999999999999999999999999
Q ss_pred CCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhh
Q psy10046 719 QPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGN 798 (805)
Q Consensus 719 r~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~ 798 (805)
| +++++.+.++.+..+++++.+. ...+.+.+.+..++.|++.+...+..+.++.+.+|++.|+++.|+.+.+..+|+
T Consensus 281 r--~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 357 (406)
T PRK11551 281 R--LRPRRVVLLIYAGILASLAALA-AAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGS 357 (406)
T ss_pred H--HhHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHH
Confidence 9 9999888877766666655554 344555566677778888877888889999999999999999999999999999
Q ss_pred ccCCCCC
Q psy10046 799 LVGPPLA 805 (805)
Q Consensus 799 ~igp~ia 805 (805)
++||.++
T Consensus 358 ~~g~~~~ 364 (406)
T PRK11551 358 MAGPLLA 364 (406)
T ss_pred HHHhhhH
Confidence 9998763
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=3e-28 Score=273.49 Aligned_cols=175 Identities=15% Similarity=0.146 Sum_probs=149.5
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q psy10046 161 GWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGV 240 (805)
Q Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i 240 (805)
+|..++...+..+......+....++|.+.+++|.+..+++++.+++.+++.++.+++|+++||+|||+++.++.+++++
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 86 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA 86 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 45544444444443222223344557999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHH
Q psy10046 241 GFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGT 319 (805)
Q Consensus 241 ~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~ 319 (805)
+++++++++|++.+++ .|+++|++.+...+...+++.+++| ++|+++++++..+..+|.+++|++++.+.+++|||+.
T Consensus 87 ~~~~~~~~~~~~~l~~-~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~ 165 (390)
T PRK03545 87 SHVLSALAWNFTVLLI-SRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTT 165 (390)
T ss_pred HHHHHHHhccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHH
Confidence 9999999999999966 6999999999888888899998887 7899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy10046 320 VLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 320 f~i~~~~~~~~~i~~~~ 336 (805)
|++.+++.++..+..++
T Consensus 166 f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 166 FLAIGGGALITLLLLIK 182 (390)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998877666555444
No 10
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=1e-28 Score=284.74 Aligned_cols=393 Identities=16% Similarity=0.187 Sum_probs=283.4
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy10046 167 AAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSC 246 (805)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a 246 (805)
.+++..++........++.+|.+.+++|.+..+.+++.+++.++..++.+++|+++||+|||++++++.++++++.++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 85 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG 85 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh
Confidence 33344443434445677778999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHH
Q psy10046 247 FSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSG 325 (805)
Q Consensus 247 ~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~ 325 (805)
++++++.+++ .|+++|++.+...+...+++.+++| ++|+++++++..+..+|..+||.+++++.+++||||.|++.++
T Consensus 86 ~~~~~~~l~~-~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~ 164 (485)
T TIGR00711 86 VAPNLELMII-FRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVP 164 (485)
T ss_pred CcCCHHHHHH-HHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhH
Confidence 9999999866 6999999999999999999999987 7899999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhcccccccc
Q psy10046 326 TFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETC 405 (805)
Q Consensus 326 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (805)
+.++..++.++..+++....+.+.+ . ....+.... .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~d-------------------------~--~g~~l~~~~-----~~~~~-------- 204 (485)
T TIGR00711 165 IGIIVVVVAFFILPRDKPAASENFD-------------------------F--LGLLLLSVG-----LGSLL-------- 204 (485)
T ss_pred HHHHHHHHHHHHcCCccccccCCCc-------------------------H--HHHHHHHHH-----HHHHH--------
Confidence 7766665555443321000000000 0 000000000 00000
Q ss_pred ccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccC
Q psy10046 406 KFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNH 485 (805)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (805)
....
T Consensus 205 --------------------------------------------------------------~~~~-------------- 208 (485)
T TIGR00711 205 --------------------------------------------------------------YGLS-------------- 208 (485)
T ss_pred --------------------------------------------------------------HHHh--------------
Confidence 0000
Q ss_pred CCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCccc
Q psy10046 486 SVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQ 565 (805)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (805)
.+.
T Consensus 209 -------------------------------------------------------------------------~~~---- 211 (485)
T TIGR00711 209 -------------------------------------------------------------------------EGP---- 211 (485)
T ss_pred -------------------------------------------------------------------------hCC----
Confidence 000
Q ss_pred cccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHH
Q psy10046 566 DFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDAREL 645 (805)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (805)
+. .+.+-+.+... . ..+... ... +.......
T Consensus 212 -------------------------~~--------~~~~~~~~~~~-~-~~~~~~---~~~-----------~~~~~~~~ 242 (485)
T TIGR00711 212 -------------------------ER--------GWFDSNEILIL-S-ITGLVA---IIA-----------FVVWELTD 242 (485)
T ss_pred -------------------------CC--------CCCCchHHHHH-H-HHHHHH---HHH-----------HHHHHHcC
Confidence 00 00000000000 0 000000 000 00000111
Q ss_pred HhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccc
Q psy10046 646 IVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNV 724 (805)
Q Consensus 646 ~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr 724 (805)
.++..+.++++++.++..++..++....++...+++|.|+++ .|+++.+++++..+.+++.++++++.|++.|| +++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r--~~~ 320 (485)
T TIGR00711 243 DNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK--IDP 320 (485)
T ss_pred CCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCc
Confidence 234556678899999888888888888888888899999987 79999999999999999999999999999999 999
Q ss_pred hhHHHHHHHHHHHHHhhhhh---hhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccC
Q psy10046 725 KKTYAACLIGCGVSTALMPL---FATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVG 801 (805)
Q Consensus 725 ~~~~~~~~~~~~i~~l~~~~---~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~ig 801 (805)
|+++.++.++.+++++++.. ...+.+.+++..++.|++.+..++.....+.+.+|++++++++|+.++++.+|+.+|
T Consensus 321 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig 400 (485)
T TIGR00711 321 RKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIG 400 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 99888888777776665541 123455566677888999888887777778888999999999999999999999998
Q ss_pred CCC
Q psy10046 802 PPL 804 (805)
Q Consensus 802 p~i 804 (805)
+.+
T Consensus 401 ~~i 403 (485)
T TIGR00711 401 TAL 403 (485)
T ss_pred HHH
Confidence 754
No 11
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=7.8e-29 Score=265.99 Aligned_cols=369 Identities=18% Similarity=0.195 Sum_probs=295.5
Q ss_pred chhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q psy10046 159 GWGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIIS 238 (805)
Q Consensus 159 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~ 238 (805)
+|||.+++..++.+...+.....++...|.+.++.++|.++.+++.+++.+.|+++..+.|.++||.+.|..+.+++++.
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLils 104 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILS 104 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHH
Confidence 36678888888888877777889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHH--HHHhhccc
Q psy10046 239 GVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPIT--SYLISEYG 315 (805)
Q Consensus 239 ~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~--~~l~~~~g 315 (805)
++.+++.+++++++.+.+ +-++.|++.|.-.|++..++..|++ ++||+..++|+.+-++|+.+.|++. +++..+.+
T Consensus 105 ai~nil~Gfs~s~~~~~~-l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~ 183 (448)
T COG2271 105 AIVNILFGFSPSLFLFAV-LWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGG 183 (448)
T ss_pred HHHHHHHhhhhHHHHHHH-HHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccc
Confidence 999999999999988856 6799999999999999999999998 7899999999999999999999999 99999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhh
Q psy10046 316 WRGTVLLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETS 395 (805)
Q Consensus 316 Wr~~f~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (805)
||..|++-+++++++.++.++..+.+ +++..+|++|+.++-..+..
T Consensus 184 w~~~f~~pgiiaiival~~~~~~rd~--------------------------Pqs~GLP~ie~~~~d~~e~~-------- 229 (448)
T COG2271 184 WRAAFYFPGIIAIIVALILLFLLRDR--------------------------PQSEGLPPIEEYRGDPLEIY-------- 229 (448)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCC--------------------------ccccCCCCHHHhhcCchhhh--------
Confidence 99999999999888887777653321 12334444433331100000
Q ss_pred hhccccccccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCC
Q psy10046 396 VATELNAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASE 475 (805)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (805)
+ +
T Consensus 230 ----------------------------~-------------------------------~------------------- 231 (448)
T COG2271 230 ----------------------------E-------------------------------E------------------- 231 (448)
T ss_pred ----------------------------h-------------------------------h-------------------
Confidence 0 0
Q ss_pred CCCCcccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhh
Q psy10046 476 PRGKPLVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQ 555 (805)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (805)
++
T Consensus 232 ------~~------------------------------------------------------------------------ 233 (448)
T COG2271 232 ------EK------------------------------------------------------------------------ 233 (448)
T ss_pred ------hc------------------------------------------------------------------------
Confidence 00
Q ss_pred hhhcCCCccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccC
Q psy10046 556 ILVNGGHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTEN 635 (805)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (805)
+| +.
T Consensus 234 ----------------------~~------------------------------------------------------~~ 237 (448)
T COG2271 234 ----------------------EN------------------------------------------------------EG 237 (448)
T ss_pred ----------------------cC------------------------------------------------------CC
Confidence 00 00
Q ss_pred ccchhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheee
Q psy10046 636 TSWMDDARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALG 714 (805)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g 714 (805)
... +..+-.-+++||..|.++++.++.+..=+.+..|.|.|+.+ +|++...+...++.+=+++++|.+++|
T Consensus 238 ----ls~----~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~G 309 (448)
T COG2271 238 ----LTA----WQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAG 309 (448)
T ss_pred ----ccH----HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHH
Confidence 000 11112346899999999999999999999999999999987 899999999999999999999999999
Q ss_pred eecCCCCccchhHHHHHH-HHHHHHHhhhhhhh-hhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHH
Q psy10046 715 WACDQPWLNVKKTYAACL-IGCGVSTALMPLFA-TNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLL 792 (805)
Q Consensus 715 ~l~dr~~~gr~~~~~~~~-~~~~i~~l~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~ 792 (805)
|++||-.-|||..+.+.+ ++..+++++++... .+++...++.+++|+...+-.-+.-....|..|.+..|++.|+...
T Consensus 310 wlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Gl 389 (448)
T COG2271 310 WLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGL 389 (448)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhh
Confidence 999995446666555444 44444444444322 3567777888888988776666777788899999999999999999
Q ss_pred HHhh-hhccCC
Q psy10046 793 AQGI-GNLVGP 802 (805)
Q Consensus 793 ~~~i-g~~igp 802 (805)
+..+ |++.+.
T Consensus 390 f~Yl~Ga~~a~ 400 (448)
T COG2271 390 FAYLIGAALAG 400 (448)
T ss_pred HHHHhhHHhcC
Confidence 9999 665543
No 12
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=9.1e-28 Score=269.25 Aligned_cols=171 Identities=19% Similarity=0.245 Sum_probs=151.3
Q ss_pred chhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q psy10046 159 GWGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIIS 238 (805)
Q Consensus 159 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~ 238 (805)
+++|..+..+++..+.........+++.|.+.+++|++..+++++.+++.++..++.+++|+++||+|||++++++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~ 87 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLF 87 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 35677777777777766555677888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc--
Q psy10046 239 GVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG-- 315 (805)
Q Consensus 239 ~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g-- 315 (805)
+++.++++++++++.+++ .|++.|++.+...+...+++.+++| ++|+++++++..+..+|.++++.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~~~~~l~~-~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 166 (405)
T TIGR00891 88 SAGTLACGFAPGYITMFI-ARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG 166 (405)
T ss_pred HHHHHHHHHhccHHHHHH-HHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 999999999999999866 6999999999999999999999887 779999999999999999999999999988766
Q ss_pred hHHHHHHHHHHHHHH
Q psy10046 316 WRGTVLLLSGTFFNL 330 (805)
Q Consensus 316 Wr~~f~i~~~~~~~~ 330 (805)
||+.|++.++..++.
T Consensus 167 w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 167 WRALFFISILPIIFA 181 (405)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998765544443
No 13
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.96 E-value=7.7e-28 Score=274.23 Aligned_cols=176 Identities=16% Similarity=0.213 Sum_probs=153.2
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISG 239 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~ 239 (805)
++|.++...++..++.+.....++..+|.+.+++|++..+.+++.+++.++++++.+++|+++||+|||++++++.++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 20 WRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 45555555555555555555677888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHH
Q psy10046 240 VGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRG 318 (805)
Q Consensus 240 i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~ 318 (805)
++.++++++++++.+++ .|++.|++.|...+...+++.+++| ++|+++++++..+..+|.+++|++++++.+.+|||+
T Consensus 100 ~~~~~~~~~~~~~~l~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~ 178 (434)
T PRK11663 100 IINILFGFSSSLWAFAL-LWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRY 178 (434)
T ss_pred HHHHHHHHHhHHHHHHH-HHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHH
Confidence 99999999999998866 6999999999888888899999998 679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy10046 319 TVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 319 ~f~i~~~~~~~~~i~~~~ 336 (805)
.|++.+++.++..++.++
T Consensus 179 ~f~~~~i~~~~~~~~~~~ 196 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCW 196 (434)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999988776655444433
No 14
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.96 E-value=1.4e-27 Score=265.72 Aligned_cols=157 Identities=13% Similarity=0.032 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Q psy10046 179 AFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTF 258 (805)
Q Consensus 179 ~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~ 258 (805)
...+++.+|.+.++||++..+.+++.+.+.++++++++++|+++||+|||++++.+++.+..+.+....++++..+++ +
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 85 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLA-C 85 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHH-H
Confidence 346778889999999999999999999999999999999999999999998877666555554443344478888866 6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 259 GLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 259 R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
|++.|++.+. .......+++++| ++|+++++++..+..+|.++++++++++.+++|||+.|++.+++.++..++.++.
T Consensus 86 R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~ 164 (368)
T TIGR00903 86 QLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAA 164 (368)
T ss_pred HHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999986 4555556678887 7899999999999999999999999999999999999999888877766655554
No 15
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.96 E-value=1.6e-27 Score=268.11 Aligned_cols=339 Identities=14% Similarity=0.078 Sum_probs=259.6
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q psy10046 161 GWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGV 240 (805)
Q Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i 240 (805)
.|.+....+...+ ........++.+|.+.++||+|..+++++.+++.+++.++++++|+++||+|||++++++++++++
T Consensus 8 ~~~~~~~~~~~~~-~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~ 86 (393)
T PRK09705 8 NFMLLVLVLIGLN-MRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAV 86 (393)
T ss_pred HHHHHHHHHHHHH-cchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHH
Confidence 3555554433333 333346678889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc-chHHH
Q psy10046 241 GFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEY-GWRGT 319 (805)
Q Consensus 241 ~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~-gWr~~ 319 (805)
+.++++++++++.+++ .|+++|++.+...+....++.+++|++|+++++++..+..+|..+|+.+++++.++. +||+.
T Consensus 87 ~~~~~~~a~~~~~ll~-~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~ 165 (393)
T PRK09705 87 GALMRELYPQSALLLS-SALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQT 165 (393)
T ss_pred HHHHHHHCcchHHHHH-HHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 9999999999999966 699999999998888888888999988999999999999999999999999998875 89998
Q ss_pred HHHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhcc
Q psy10046 320 VLLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATE 399 (805)
Q Consensus 320 f~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (805)
+.+.++..++.++..++..+.+ ++ +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~-------~~---~--------------------------------------------- 190 (393)
T PRK09705 166 LAWWALPAVVALFAWWWQSARE-------VA---S--------------------------------------------- 190 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-------Cc---c---------------------------------------------
Confidence 8776655443332222211000 00 0
Q ss_pred ccccccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCC
Q psy10046 400 LNAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGK 479 (805)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (805)
+ ++ +
T Consensus 191 ----------------------~------------------~~-------------~----------------------- 194 (393)
T PRK09705 191 ----------------------S------------------HK-------------T----------------------- 194 (393)
T ss_pred ----------------------c------------------cC-------------C-----------------------
Confidence 0 00 0
Q ss_pred cccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhc
Q psy10046 480 PLVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVN 559 (805)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (805)
. .
T Consensus 195 -----------------------------------------------------------~-~------------------ 196 (393)
T PRK09705 195 -----------------------------------------------------------T-T------------------ 196 (393)
T ss_pred -----------------------------------------------------------C-c------------------
Confidence 0 0
Q ss_pred CCCccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccch
Q psy10046 560 GGHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWM 639 (805)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (805)
T Consensus 197 -------------------------------------------------------------------------------- 196 (393)
T PRK09705 197 -------------------------------------------------------------------------------- 196 (393)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCC
Q psy10046 640 DDARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQ 719 (805)
Q Consensus 640 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr 719 (805)
...+.++++.+|.+.+..++...++.....|+|.|++++|++..+++++.++++++.++|+++.|++.||
T Consensus 197 ----------~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r 266 (393)
T PRK09705 197 ----------TPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARH 266 (393)
T ss_pred ----------CCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 0012234556666666666666777778889999999899999999999999999999999999999999
Q ss_pred CCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccC-ccchhhhhHHHHHHHhhhh
Q psy10046 720 PWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVP-LDRFATAYGLTLLAQGIGN 798 (805)
Q Consensus 720 ~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~~~~a~gl~~~~~~ig~ 798 (805)
+++++.+.++.++.+++++.+.....+...+ ..++.|++.+..++.......+..+ ++.+++++|+.+.+..+++
T Consensus 267 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~ 342 (393)
T PRK09705 267 --QDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIA 342 (393)
T ss_pred --ccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 8998888777766666555443222222222 2345677777777777666667664 6789999999999999998
Q ss_pred ccCCCC
Q psy10046 799 LVGPPL 804 (805)
Q Consensus 799 ~igp~i 804 (805)
.+||++
T Consensus 343 ~~gp~~ 348 (393)
T PRK09705 343 GLAPWF 348 (393)
T ss_pred HHHHHH
Confidence 888764
No 16
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.96 E-value=3.7e-28 Score=279.44 Aligned_cols=175 Identities=14% Similarity=0.086 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHH
Q psy10046 162 WMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVG 241 (805)
Q Consensus 162 w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~ 241 (805)
|.++..+++.+++.+.....+++..|.+.++||++..+.+++.+++.++++++++++|+++||+|||+++.+++++++++
T Consensus 28 ~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 107 (467)
T PRK09556 28 MQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAIC 107 (467)
T ss_pred HHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHH
Confidence 44555555555555666677888899999999999999999999999999999999999999999999998888888777
Q ss_pred HHHHHh-----cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc-
Q psy10046 242 FVLSCF-----SRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEY- 314 (805)
Q Consensus 242 ~i~~a~-----a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~- 314 (805)
.++.++ +++++.+++ +|++.|++.+...+....++.+|+| ++||+++|++..+..+|.+++++++.++....
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~ 186 (467)
T PRK09556 108 MLGFGASLGSGSVSLGLMIA-LWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF 186 (467)
T ss_pred HHHHHHHHhcccchHHHHHH-HHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc
Confidence 766554 688988866 6999999999988999999999998 67999999999999999999999988777653
Q ss_pred --chHHHHHHHHHHHHHHHHHHHhc
Q psy10046 315 --GWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 315 --gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
+||+.|.+.+++.+++.++.+++
T Consensus 187 ~~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 187 DGHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHh
Confidence 69999988887777666655544
No 17
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=8.7e-27 Score=262.13 Aligned_cols=171 Identities=13% Similarity=0.124 Sum_probs=149.1
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q psy10046 161 GWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGV 240 (805)
Q Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i 240 (805)
.|..++.+.+..++.....+....++|.+.+++|++..+.++..+++.++..++.+++|+++||+|||++++++.+++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 46655555555444444444555567899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHH
Q psy10046 241 GFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGT 319 (805)
Q Consensus 241 ~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~ 319 (805)
+.++++++++++.+++ +|++.|++.+...+...+++.+++| ++|+++++++..+..+|.+++|++++++.+.+|||+.
T Consensus 98 ~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~ 176 (394)
T PRK10213 98 SCLLVSFANSFSLLLI-GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNV 176 (394)
T ss_pred HHHHHHHHChHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHH
Confidence 9999999999999966 6999999999999999999999997 7799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy10046 320 VLLLSGTFFNLCV 332 (805)
Q Consensus 320 f~i~~~~~~~~~i 332 (805)
|++.+++.+++.+
T Consensus 177 f~~~~~l~~~~~l 189 (394)
T PRK10213 177 FNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHHHH
Confidence 9998766555443
No 18
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=8.4e-27 Score=260.34 Aligned_cols=177 Identities=16% Similarity=0.233 Sum_probs=151.7
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISG 239 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~ 239 (805)
++|..++.+++..+........++.+.|.+.+++|.+..+++++.+++.++..++.+++|+++||+|||++++++.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFS 93 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHH
Confidence 45655555555555443334566777899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHH
Q psy10046 240 VGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRG 318 (805)
Q Consensus 240 i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~ 318 (805)
++.++++++++++.+++ .|++.|++.+...+...+++.+++| ++|++++++...+..+|..+++.+++++.+..||++
T Consensus 94 ~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~ 172 (398)
T TIGR00895 94 VFTLLCALATNVTQLLI-LRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRS 172 (398)
T ss_pred HHHHHHHHccchHHHHH-HHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccccee
Confidence 99999999999998866 6999999999999999999999998 679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q psy10046 319 TVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 319 ~f~i~~~~~~~~~i~~~~~ 337 (805)
.|++.+++.++..++.+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~ 191 (398)
T TIGR00895 173 LFYVGGIAPLLLLLLLMRF 191 (398)
T ss_pred ehhhhhhHHHHHHHHHHHh
Confidence 9998876555554444443
No 19
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=1e-26 Score=256.45 Aligned_cols=333 Identities=15% Similarity=0.121 Sum_probs=261.8
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC-----cHHHH
Q psy10046 180 FSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR-----TIEHM 254 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~-----~~~~l 254 (805)
....+.+|.+..+++.+..+++++.+++.++.+++.+++|+++||+|||++++++.++.+++.++.+++. +++.+
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (365)
T TIGR00900 16 AITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQV 95 (365)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 3445556788889999999999999999999999999999999999999999999999988888887776 88888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q psy10046 255 YLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 255 ~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~ 333 (805)
++ .|++.|++.+...+...+++.+++| ++|++++++...+..+|.+++|++++++.+..|||+.|++.++..++..++
T Consensus 96 ~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~ 174 (365)
T TIGR00900 96 YV-LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALL 174 (365)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 66 6999999999999999999999997 779999999999999999999999999999999999999887766555544
Q ss_pred HHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhcccccccccccccccc
Q psy10046 334 GAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKFSSVINI 413 (805)
Q Consensus 334 ~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (805)
.++...|+.. +.+
T Consensus 175 ~~~~~~~~~~----~~~--------------------------------------------------------------- 187 (365)
T TIGR00900 175 IVSVRIPELA----ASE--------------------------------------------------------------- 187 (365)
T ss_pred HHhcccccCC----Ccc---------------------------------------------------------------
Confidence 4443322100 000
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCCCCCCCC
Q psy10046 414 PTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSVESDGPH 493 (805)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (805)
+. +. .+
T Consensus 188 --------~~-----------------~~------------~~------------------------------------- 193 (365)
T TIGR00900 188 --------IQ-----------------AL------------SN------------------------------------- 193 (365)
T ss_pred --------cc-----------------cc------------ch-------------------------------------
Confidence 00 00 00
Q ss_pred CcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCccccccccccc
Q psy10046 494 EPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDFLHSKLG 573 (805)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (805)
..
T Consensus 194 -----------------------------------------------~~------------------------------- 195 (365)
T TIGR00900 194 -----------------------------------------------AV------------------------------- 195 (365)
T ss_pred -----------------------------------------------hH-------------------------------
Confidence 00
Q ss_pred cccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHHHhhhcccc
Q psy10046 574 VRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIVGMFDFS 653 (805)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (805)
..+..+.. ..
T Consensus 196 -----------------------------------------------------------------~~~~~~~~-----~~ 205 (365)
T TIGR00900 196 -----------------------------------------------------------------LRDTREGI-----KF 205 (365)
T ss_pred -----------------------------------------------------------------HHHHHhHH-----HH
Confidence 00000000 12
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHH
Q psy10046 654 MFLELHFLLVSISTILLFTWFVIPY-FYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAAC 731 (805)
Q Consensus 654 ~l~~~~~~~~~i~~~~~~~~~~~~~-~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~ 731 (805)
+++++.++.+++..++....+.... .+.|.|.++ .|.+..+.+.+....+++.+++.++.+++.|| .++++.+..+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~ 283 (365)
T TIGR00900 206 VLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRY--FKRMALMTGA 283 (365)
T ss_pred HHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--hchhHHHHHH
Confidence 4566777776666665555555444 678888876 79999999999999999999999999999999 8898888877
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 732 LIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 732 ~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
.++++++++.+.....+.+.+.+..++.|++.+...+....++.+.+|++.++++.|+.+++..+|+++||.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 356 (365)
T TIGR00900 284 IFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLIL 356 (365)
T ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777666553222366677788889999999889999999999999999999999999999999988764
No 20
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.96 E-value=5.5e-27 Score=260.53 Aligned_cols=160 Identities=18% Similarity=0.245 Sum_probs=145.5
Q ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Q psy10046 177 GIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYL 256 (805)
Q Consensus 177 ~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i 256 (805)
.....++...|.+.+++|++..+++++.+++.++..++.+++|+++||+|||++++++.++++++.++++++++++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (399)
T TIGR00893 8 LDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYI 87 (399)
T ss_pred HHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 34456677778999999999999999999999999999999999999999999999999999999999999999999966
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q psy10046 257 TFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGA 335 (805)
Q Consensus 257 ~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~ 335 (805)
.|++.|++.+...+....++.+++| ++|++++++...+..+|.++++++++++.+..|||+.|++.+++.++..++.+
T Consensus 88 -~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (399)
T TIGR00893 88 -LRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWL 166 (399)
T ss_pred -HHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhh
Confidence 6999999999999999999999998 77999999999999999999999999999999999999998887776666555
Q ss_pred hc
Q psy10046 336 IM 337 (805)
Q Consensus 336 ~~ 337 (805)
+.
T Consensus 167 ~~ 168 (399)
T TIGR00893 167 KF 168 (399)
T ss_pred he
Confidence 44
No 21
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=7.4e-27 Score=262.67 Aligned_cols=341 Identities=13% Similarity=0.134 Sum_probs=262.0
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q psy10046 161 GWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGV 240 (805)
Q Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i 240 (805)
||.+...+++..++.......++..+|.+.+++|++..+.+++.+++.+++.++.+++|+++||+|||++++++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i 84 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMIL 84 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 44555555555555555567788889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhh-ccchHH
Q psy10046 241 GFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLIS-EYGWRG 318 (805)
Q Consensus 241 ~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~-~~gWr~ 318 (805)
+.++++++++++.+++ .|++.|++.+...+....++.+++| ++|+.++++...+..+|..++|.+.+++.. ..|||+
T Consensus 85 ~~~l~~~~~~~~~~~~-~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~ 163 (394)
T PRK03699 85 AVAGLMFSHSLALFSI-AMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYW 163 (394)
T ss_pred HHHHHHHcchHHHHHH-HHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 9999999999988866 6999999999888888888888887 679999999988899999999999988765 579999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhc
Q psy10046 319 TVLLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVAT 398 (805)
Q Consensus 319 ~f~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (805)
.|++.+++.++.+++.++.+.|+. ++ .+
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~p~~-------~~-~~-------------------------------------------- 191 (394)
T PRK03699 164 VYACIGLVYVAIFILTLFSEFPAL-------GK-HA-------------------------------------------- 191 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccc-------cc-cC--------------------------------------------
Confidence 999888776665554443322210 00 00
Q ss_pred cccccccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCC
Q psy10046 399 ELNAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRG 478 (805)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (805)
++ + ..
T Consensus 192 ----------------------~~-------------------~------------~~---------------------- 196 (394)
T PRK03699 192 ----------------------PK-------------------A------------DK---------------------- 196 (394)
T ss_pred ----------------------cc-------------------c------------cC----------------------
Confidence 00 0 00
Q ss_pred CcccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhh
Q psy10046 479 KPLVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILV 558 (805)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (805)
. .
T Consensus 197 --------------------------------------------------------------~---~------------- 198 (394)
T PRK03699 197 --------------------------------------------------------------P---V------------- 198 (394)
T ss_pred --------------------------------------------------------------c---c-------------
Confidence 0 0
Q ss_pred cCCCccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccc
Q psy10046 559 NGGHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSW 638 (805)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (805)
T Consensus 199 -------------------------------------------------------------------------------- 198 (394)
T PRK03699 199 -------------------------------------------------------------------------------- 198 (394)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeec
Q psy10046 639 MDDARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWAC 717 (805)
Q Consensus 639 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~ 717 (805)
.+...++.++.+.+..++.....+.+..|+|.|+++ .|++..+++.+.+.+.++.++|+++.|+++
T Consensus 199 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~ 265 (394)
T PRK03699 199 -------------AKEKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIV 265 (394)
T ss_pred -------------ccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 000012334555555566666666777899999965 799999999999999999999999999999
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhh
Q psy10046 718 DQPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIG 797 (805)
Q Consensus 718 dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig 797 (805)
|| +++++++....++.++.++++. ...+.+.+.+..++.|++.+..++....+..+..+ +.++...|+...+..+|
T Consensus 266 dr--~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g 341 (394)
T PRK03699 266 RF--FDLQRILTVLAGLALVLMYLFV-NTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIG 341 (394)
T ss_pred HH--hchhhHHHHHHHHHHHHHHHHH-HcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHH
Confidence 99 9999888777766666555544 34455555666778888888888887777777665 44577888998899999
Q ss_pred hccCCCC
Q psy10046 798 NLVGPPL 804 (805)
Q Consensus 798 ~~igp~i 804 (805)
++++|.+
T Consensus 342 ~~i~p~~ 348 (394)
T PRK03699 342 TMLTFVV 348 (394)
T ss_pred HHHHHHH
Confidence 9988864
No 22
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.96 E-value=1.8e-26 Score=261.80 Aligned_cols=165 Identities=16% Similarity=0.196 Sum_probs=144.7
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISG 239 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~ 239 (805)
++|..++.+.+..+.............|.+.+++|++..+.+++.+++.+++.++++++|+++||+|||++++++.++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 44555555555555433334556777899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHH
Q psy10046 240 VGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRG 318 (805)
Q Consensus 240 i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~ 318 (805)
++.++++++++++.+++ +|++.|++.+..++....++.+++| ++|+++++++..+..+|.++++.+.+.+.+..|||+
T Consensus 95 ~~~~~~~~~~~~~~l~~-~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~ 173 (426)
T PRK12307 95 VGTGLSGLASGVIMLTL-SRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRA 173 (426)
T ss_pred HHHHHHHHHhHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHH
Confidence 99999999999999866 6999999999999999999999887 679999999999999999999999999999999999
Q ss_pred HHHHHHH
Q psy10046 319 TVLLLSG 325 (805)
Q Consensus 319 ~f~i~~~ 325 (805)
.|++.++
T Consensus 174 ~f~i~~~ 180 (426)
T PRK12307 174 AFFVGLL 180 (426)
T ss_pred HHHHHHH
Confidence 9987543
No 23
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=3.8e-27 Score=258.77 Aligned_cols=335 Identities=21% Similarity=0.298 Sum_probs=255.4
Q ss_pred HHHHHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHH
Q psy10046 177 GIAFSFGLLYI-EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMY 255 (805)
Q Consensus 177 ~~~~~~~~~~p-~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~ 255 (805)
.....+.+.+| .+.+++|.+..+++++.+++.++..++.+++|+++||+|||++++++.++.+++.++..++++++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~- 88 (352)
T PF07690_consen 10 FGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLL- 88 (352)
T ss_dssp HHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHH-
T ss_pred HHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHH-
Confidence 33344566667 8889999999999999999999999999999999999999999999999999997777777888866
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Q psy10046 256 LTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCG 334 (805)
Q Consensus 256 i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~ 334 (805)
++.|++.|++.+...+...+++.+++| ++|++++++...+..+|.+++|.+++++.+..|||+.|++.+++.++.+++.
T Consensus 89 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 89 LIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILF 168 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHH
T ss_pred hhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhH
Confidence 447999999999999999999999998 5899999999999999999999999999999999999999998888877654
Q ss_pred HhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhccccccccccccccccc
Q psy10046 335 AIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKFSSVINIP 414 (805)
Q Consensus 335 ~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (805)
.++.+.+.. .+.
T Consensus 169 ~~~~~~~~~---~~~----------------------------------------------------------------- 180 (352)
T PF07690_consen 169 ILFLPEPPP---PRE----------------------------------------------------------------- 180 (352)
T ss_dssp HCCC---ST---TTT-----------------------------------------------------------------
T ss_pred hhhhhhccc---ccc-----------------------------------------------------------------
Confidence 333221000 000
Q ss_pred cccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCCCCCCCCC
Q psy10046 415 TYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSVESDGPHE 494 (805)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (805)
+.. ++ ++. .
T Consensus 181 -------~~~----------------~~--------~~~--~-------------------------------------- 189 (352)
T PF07690_consen 181 -------RES----------------PK--------ESE--S-------------------------------------- 189 (352)
T ss_dssp ---------S----------------ST--------TTT-----------------------------------------
T ss_pred -------ccc----------------cc--------ccc--c--------------------------------------
Confidence 000 00 000 0
Q ss_pred cccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCcccccccccccc
Q psy10046 495 PLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDFLHSKLGV 574 (805)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (805)
T Consensus 190 -------------------------------------------------------------------------------- 189 (352)
T PF07690_consen 190 -------------------------------------------------------------------------------- 189 (352)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHHHhhhcc--c
Q psy10046 575 RRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIVGMFD--F 652 (805)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 652 (805)
+..++..+ .
T Consensus 190 ---------------------------------------------------------------------~~~~~~~~~~~ 200 (352)
T PF07690_consen 190 ---------------------------------------------------------------------KKPKPLKPGFK 200 (352)
T ss_dssp ----------------------------------------------------------------------HHHCCCH-CT
T ss_pred ---------------------------------------------------------------------ccccccccccc
Confidence 00000000 1
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHH-HhcCCC-hhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHH
Q psy10046 653 SMFLELHFLLVSISTILLFTWFVIPYFYLTDFV-TNQGLS-KEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAA 730 (805)
Q Consensus 653 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~-~~~G~s-~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~ 730 (805)
.+++++.+|.+.+..++....+.....++|.|+ +..|++ ..+++.+..+.++..++++++.|++.|| +++++...+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~ 278 (352)
T PF07690_consen 201 SLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR--FGRRRRLLI 278 (352)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHH
T ss_pred cccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCcHHHHHH
Confidence 234445455444455555556666788999984 458999 7899989999999999999999999999 887666555
Q ss_pred HHHHHHHHHhhhhhh--hhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCC
Q psy10046 731 CLIGCGVSTALMPLF--ATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGP 802 (805)
Q Consensus 731 ~~~~~~i~~l~~~~~--~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp 802 (805)
......+..+.+... ..+....++..++.|++.+...+....++.+.+|++++|+++|+.++..++|+++||
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 279 AILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 555554444443322 234556666788899999999999999999999999999999999999999999987
No 24
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.95 E-value=7e-26 Score=253.65 Aligned_cols=159 Identities=14% Similarity=0.196 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Q psy10046 177 GIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYL 256 (805)
Q Consensus 177 ~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i 256 (805)
.......+.+|.+.+++|++..+++++.+++.+++.++.+++|+++||+|||+++.++.++++++.++++++++++.+++
T Consensus 17 ~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 96 (382)
T PRK10091 17 MAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAI 96 (382)
T ss_pred hhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 33356666789999999999999999999999999999999999999999999999999999999999999999999977
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q psy10046 257 TFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGA 335 (805)
Q Consensus 257 ~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~ 335 (805)
.|++.|++.+...+....++.++++ ++|+++++++..+..+|..++|++++++.+..|||+.|++.+++.++..+..+
T Consensus 97 -~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 97 -GRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred -HHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999888888888889987 57999999999999999999999999999999999999998887666555444
Q ss_pred h
Q psy10046 336 I 336 (805)
Q Consensus 336 ~ 336 (805)
+
T Consensus 176 ~ 176 (382)
T PRK10091 176 F 176 (382)
T ss_pred H
Confidence 3
No 25
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.95 E-value=6e-26 Score=258.53 Aligned_cols=171 Identities=13% Similarity=0.086 Sum_probs=133.1
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhC---CChhHHHHHHH---HHHHHHHHHHHHHHHHHhhhCChHHHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFG---ASKSKTAWIGS---LFMAVPLLLGPVASAFVEKFGCRSMTIV 233 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g---~s~~~~~l~~s---~~~lg~~ig~l~~G~LsDr~Grr~vlii 233 (805)
++|..++.+++..++.+.....++...|.+.++++ .+..+.+...+ +..++..++++++|+++||+|||+++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 45555555555555545555668888899999985 55554444444 4445555999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCcHHH-------HHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHH
Q psy10046 234 AGIISGVGFVLSCFSRTIEH-------MYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAP 305 (805)
Q Consensus 234 ~~~l~~i~~i~~a~a~~~~~-------l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~ 305 (805)
++++++++++++++++++.. .++++|+++|++.|+.++...+++.|++| ++||++.++...+..+|.+++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998742 23457999999999999999999999987 78999999998888888888877
Q ss_pred HHHHHh--------hccchHHHHHHHHHHHHHH
Q psy10046 306 ITSYLI--------SEYGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 306 i~~~l~--------~~~gWr~~f~i~~~~~~~~ 330 (805)
+...+. ..+|||++|++.+++.++.
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 665543 2579999999866655443
No 26
>KOG0253|consensus
Probab=99.95 E-value=5.9e-27 Score=244.48 Aligned_cols=205 Identities=17% Similarity=0.177 Sum_probs=172.7
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHH
Q psy10046 151 EDSKIPDGGWGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSM 230 (805)
Q Consensus 151 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~v 230 (805)
.....+.++++|...+...+..+...+.....+.+.|.+...+|.+..+..++......|+.+++..||.++|++|||+.
T Consensus 66 a~~aigfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~ 145 (528)
T KOG0253|consen 66 AMNAIGFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKG 145 (528)
T ss_pred hhhhcCcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchh
Confidence 33445667788888777776666555555666777788889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHH
Q psy10046 231 TIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSY 309 (805)
Q Consensus 231 lii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~ 309 (805)
+.+..+..++..++.++++|+.++++ +|.+.|+|.|+ .+...++-.+..| .+|+..+-.. ..+.+|.++...++..
T Consensus 146 f~~T~l~t~v~~~is~~spnf~~L~~-f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~ 222 (528)
T KOG0253|consen 146 FNLTFLVTGVFGVISGASPNFASLCV-FRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWG 222 (528)
T ss_pred hhhhHHHHHHHHHhhcCCCCeehhhH-HHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHH
Confidence 99999999999999999999999966 79999999998 7777777778777 6787776666 8999999999999999
Q ss_pred HhhccchHHHHHHHHHHH-HHHHHHHHhccCCchhhhhhchHHHHHhhhc
Q psy10046 310 LISEYGWRGTVLLLSGTF-FNLCVCGAIMRDPEWWTLEQNKEKDLKSIKG 358 (805)
Q Consensus 310 l~~~~gWr~~f~i~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~ 358 (805)
++.++||||.+...+... +...++.+..++|++...+++++++.+.+++
T Consensus 223 vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~k 272 (528)
T KOG0253|consen 223 VMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHK 272 (528)
T ss_pred HHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHH
Confidence 999999999988877543 3444455667889999999999998877665
No 27
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.95 E-value=8e-26 Score=261.65 Aligned_cols=167 Identities=16% Similarity=0.124 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhH-HHH-----HHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHH
Q psy10046 163 MVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSK-TAW-----IGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGI 236 (805)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~-~~l-----~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~ 236 (805)
..++++++..++.+.....++...|.+.++|+.+... ..+ +.++..+++.+|++++|+++||+|||++++++++
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 95 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIV 95 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 3444444555544444456777889999998643321 122 2578889999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCcHHH-------HHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHH
Q psy10046 237 ISGVGFVLSCFSRTIEH-------MYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITS 308 (805)
Q Consensus 237 l~~i~~i~~a~a~~~~~-------l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~ 308 (805)
+++++++++++++++.+ +++++|+++|++.|+.++...+++.+++| ++||++.+++..+..+|.++++.+..
T Consensus 96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~ 175 (490)
T PRK10642 96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVV 175 (490)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999875 23557999999999999999999999997 78999999999888888888877665
Q ss_pred HHh--------hccchHHHHHHHHHHHHH
Q psy10046 309 YLI--------SEYGWRGTVLLLSGTFFN 329 (805)
Q Consensus 309 ~l~--------~~~gWr~~f~i~~~~~~~ 329 (805)
.+. ..+|||+.|++.+++.++
T Consensus 176 ~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 176 LISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred HHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 443 257999999986655443
No 28
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=4.7e-26 Score=262.16 Aligned_cols=386 Identities=12% Similarity=0.099 Sum_probs=272.7
Q ss_pred HHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcH
Q psy10046 172 NMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTI 251 (805)
Q Consensus 172 ~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~ 251 (805)
.++.......+...+|.+.+++|.+..+.+++.+.+.++.+++.+++|+++||+|||++++++.++++++.+++++++++
T Consensus 19 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 98 (471)
T PRK10504 19 FFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTL 98 (471)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 33333334456667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHH
Q psy10046 252 EHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 252 ~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~ 330 (805)
+.+++ .|+++|++.+...+...+++.+++| ++|++++++......+|.++||.+++++.++.||||.|++...+.++.
T Consensus 99 ~~l~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~ 177 (471)
T PRK10504 99 NELLL-ARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIG 177 (471)
T ss_pred HHHHH-HHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 98866 6999999999999999999999988 679999999999999999999999999999999999999987766655
Q ss_pred HHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhccccccccccccc
Q psy10046 331 CVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKFSSV 410 (805)
Q Consensus 331 ~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (805)
.++.....+.... ...+.+........ ....-.....+.....
T Consensus 178 ~~~~~~~~~~~~~-~~~r~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~------------------- 220 (471)
T PRK10504 178 AIATLMLMPNYTM-QTRRFDLSGFLLLA-----------------VGMATLTLALDGSKGL------------------- 220 (471)
T ss_pred HHHHHHhCCCccc-cCCCCChHHHHHHH-----------------HHHHHHHHHHhcCCcC-------------------
Confidence 5555443322110 00000000000000 0000000000000000
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCCCCC
Q psy10046 411 INIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSVESD 490 (805)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (805)
T Consensus 221 -------------------------------------------------------------------------------- 220 (471)
T PRK10504 221 -------------------------------------------------------------------------------- 220 (471)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCcccccccc
Q psy10046 491 GPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDFLHS 570 (805)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (805)
.|. .
T Consensus 221 ------------------------------------~~~---------------~------------------------- 224 (471)
T PRK10504 221 ------------------------------------GLS---------------P------------------------- 224 (471)
T ss_pred ------------------------------------Ccc---------------h-------------------------
Confidence 000 0
Q ss_pred ccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHHHhhhc
Q psy10046 571 KLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIVGMF 650 (805)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (805)
..+ ......+... ........ +...++.+
T Consensus 225 -----------------------------------~~~--~~~~~~~~~~---~~~~~~~~-----------~~~~~~~~ 253 (471)
T PRK10504 225 -----------------------------------LAI--AGLVAVGVVA---LLLYLLHA-----------RNNNRALF 253 (471)
T ss_pred -----------------------------------HHH--HHHHHHHHHH---HHHHHHHH-----------hcCCCCcc
Confidence 000 0000000000 00000000 00012233
Q ss_pred cccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHH
Q psy10046 651 DFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYA 729 (805)
Q Consensus 651 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~ 729 (805)
+.+++|++.++..++..++...++....++.|.|++. .|.++..++++..+..++.+++.++.|++.|| +++|+++.
T Consensus 254 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r--~g~~~~~~ 331 (471)
T PRK10504 254 SLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR--FGYRRVLV 331 (471)
T ss_pred CHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCchHHHH
Confidence 4567899999988888888877777777888999885 89999999999999999999999999999999 99999988
Q ss_pred HHHHHHHHHHhhhhhhh--hhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 730 ACLIGCGVSTALMPLFA--TNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 730 ~~~~~~~i~~l~~~~~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
++.++.++..+++.... ...+.+.+..++.|++.+..++....++.+.+|++.++.++|+.++.+.+|..+||.+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i 408 (471)
T PRK10504 332 ATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTI 408 (471)
T ss_pred HHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHH
Confidence 88777766655544322 2233334455667788888888888889999999999999999999999999888764
No 29
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.95 E-value=6.2e-26 Score=261.48 Aligned_cols=165 Identities=11% Similarity=0.078 Sum_probs=134.3
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCc
Q psy10046 171 INMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRT 250 (805)
Q Consensus 171 ~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~ 250 (805)
..++.....+.+++++|.+.+++|++..+++++.+++.+++.++.+++|+++||+|||+++.++.++++++.++++++++
T Consensus 44 ~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s 123 (476)
T PLN00028 44 SFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSS 123 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcC
Confidence 33333344456778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHh----h-----ccchHHHH
Q psy10046 251 IEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLI----S-----EYGWRGTV 320 (805)
Q Consensus 251 ~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~----~-----~~gWr~~f 320 (805)
++.+++ +|++.|++.+... ....++++++| ++||+++++...+..+|..+++.+.+.+. . ..|||+.|
T Consensus 124 ~~~l~~-~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f 201 (476)
T PLN00028 124 ATGFIA-VRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAF 201 (476)
T ss_pred HHHHHH-HHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHH
Confidence 998866 6999999987644 45567789997 67999999998776677666665554432 2 25899999
Q ss_pred HHHHHHHHHHHHHHHhc
Q psy10046 321 LLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 321 ~i~~~~~~~~~i~~~~~ 337 (805)
++.+++.++.+++.+++
T Consensus 202 ~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 202 FVPGLLHIIMGILVLTL 218 (476)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998877766665544
No 30
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.95 E-value=1.2e-25 Score=259.13 Aligned_cols=173 Identities=16% Similarity=0.169 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHHhHHHH-HHHHHHHHHHHHHh--------CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHH
Q psy10046 162 WMVVLAAFFINMAGDGIA-FSFGLLYIEFLNEF--------GASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTI 232 (805)
Q Consensus 162 w~~~~~~~~~~~~~~~~~-~~~~~~~p~i~~~~--------g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vli 232 (805)
+..++++.+..+ ..++. ..++...+.+.+.| +++..+.+++.+++.++.+++++++|+++||+|||++++
T Consensus 11 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 11 FSITLVATLGGL-LFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHH-hcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 334444444333 33433 34566667788877 888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc---------Cc---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHH
Q psy10046 233 VAGIISGVGFVLSCFS---------RT---IEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFG 299 (805)
Q Consensus 233 i~~~l~~i~~i~~a~a---------~~---~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG 299 (805)
++.++++++.++++++ .+ +..+ +++|+++|++.|+..+...+++++++| ++||+++++...+..+|
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G 168 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEF-VIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFG 168 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHH-HHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHH
Confidence 9999999998888763 12 3445 447999999999999999999999998 77999999999999999
Q ss_pred HhhHHHHHHHHh--------hccchHHHHHHHHHHHHHHHHHHHh
Q psy10046 300 TTVYAPITSYLI--------SEYGWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 300 ~~lgp~i~~~l~--------~~~gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
.++++++++.+. ...|||+.|++.+++.++..+..++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~ 213 (479)
T PRK10077 169 QLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYF 213 (479)
T ss_pred HHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHc
Confidence 999988876654 3579999999887766665544433
No 31
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.95 E-value=1.2e-25 Score=250.81 Aligned_cols=157 Identities=11% Similarity=0.116 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q psy10046 180 FSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFG 259 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R 259 (805)
..+.+..|.+.+++|.+..+++++.+++.++..++.+++|+++||+|||++++++.++.+++.++++++++++.+++ .|
T Consensus 22 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 100 (385)
T TIGR00710 22 DMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLV-LR 100 (385)
T ss_pred HHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH-HH
Confidence 44556679999999999999999999999999999999999999999999999999999999999999999999866 69
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
++.|++.+...+...+++.+++| ++|++++++......+|..++|.+++++.+..|||+.|++.+++.++..++.++.
T Consensus 101 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 101 FVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred HHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999987 6799999999999999999999999999999999999999887776665555443
No 32
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.95 E-value=6.6e-27 Score=259.13 Aligned_cols=162 Identities=15% Similarity=0.154 Sum_probs=144.1
Q ss_pred hHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHH
Q psy10046 175 GDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHM 254 (805)
Q Consensus 175 ~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l 254 (805)
.+.....++...|.+.+++|++..+.+++.+++.+++.++.+++|+++||+|||++++++.++.+++.++++++++++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (379)
T TIGR00881 7 YYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVM 86 (379)
T ss_pred HHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 33445667778899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHH-HHHHHHhhccchHHHHHHHHHHHHHHHH
Q psy10046 255 YLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYA-PITSYLISEYGWRGTVLLLSGTFFNLCV 332 (805)
Q Consensus 255 ~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp-~i~~~l~~~~gWr~~f~i~~~~~~~~~i 332 (805)
++ .|++.|++.+...+...+++.+++| ++|++++++...+..+|.+++| ++++.+....+||+.|++.+++.++..+
T Consensus 87 ~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (379)
T TIGR00881 87 AA-LWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSL 165 (379)
T ss_pred HH-HHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Confidence 66 6999999999999999999999998 6799999999999999999999 5777777788999999988877766655
Q ss_pred HHHhc
Q psy10046 333 CGAIM 337 (805)
Q Consensus 333 ~~~~~ 337 (805)
+.+++
T Consensus 166 ~~~~~ 170 (379)
T TIGR00881 166 ICFLL 170 (379)
T ss_pred HHhee
Confidence 55544
No 33
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.95 E-value=1.7e-25 Score=252.41 Aligned_cols=176 Identities=15% Similarity=0.121 Sum_probs=151.4
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISG 239 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~ 239 (805)
..|+..+...+..++.......+.+.+|.+.+++|++..+.++..+++.+++.++.++.|+++||+|||++++++.++++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 89 (406)
T PRK15402 10 QALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFI 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34666666666666555555566667788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHH
Q psy10046 240 VGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRG 318 (805)
Q Consensus 240 i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~ 318 (805)
++.++++++++++.+++ .|++.|++.+...+...+++.+++| ++|++++++...+..+|..++|.+++++.++.|||+
T Consensus 90 ~~~~~~~~~~~~~~l~~-~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~ 168 (406)
T PRK15402 90 LTCLAILLAQSIEQFTL-LRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRG 168 (406)
T ss_pred HHHHHHHHHccHHHHHH-HHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccH
Confidence 99999999999998866 6999999999888888888888887 568888999988888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy10046 319 TVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 319 ~f~i~~~~~~~~~i~~~~ 336 (805)
.|++.+++.++.++..++
T Consensus 169 ~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK15402 169 MFVLFAALAALSFFGLWR 186 (406)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999988877766555444
No 34
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.95 E-value=2.7e-26 Score=263.85 Aligned_cols=180 Identities=13% Similarity=0.157 Sum_probs=154.5
Q ss_pred CCchhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH----------------------HhCCChhHHHHHHHHHHHHHHHH
Q psy10046 157 DGGWGWMVVLAAFFINMAGDGIAFSFGLLYIEFLN----------------------EFGASKSKTAWIGSLFMAVPLLL 214 (805)
Q Consensus 157 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~----------------------~~g~s~~~~~l~~s~~~lg~~ig 214 (805)
....||.+++..++.....+......+...+.+.+ +++++..+.+++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 34467888888777777666666677666666665 78999999999999999999999
Q ss_pred HHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHH
Q psy10046 215 GPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS--RTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSL 291 (805)
Q Consensus 215 ~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a--~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi 291 (805)
++++|+++||+|||+++.++.++++++.+++.++ .+++.+++ +|+++|++.+...+....++.+|+| ++|++++++
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 171 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVF-CRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGM 171 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHH-HHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHH
Confidence 9999999999999999999999999998887543 56667645 7999999999999999999999998 789999999
Q ss_pred HHHHhhHHHhhHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 292 GSTGTGFGTTVYAPITSYLISE-YGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 292 ~~~~~~lG~~lgp~i~~~l~~~-~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
...+..+|.++++++++++.+. .|||+.|++.+++.++..++.+++
T Consensus 172 ~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 172 STSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHH
Confidence 9999999999999999999988 499999999988777666655544
No 35
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=4.1e-25 Score=256.53 Aligned_cols=193 Identities=16% Similarity=0.122 Sum_probs=151.1
Q ss_pred CCCchhHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChH
Q psy10046 156 PDGGWGWMVVLAAFFINMAGDGIA-FSFGLLYIEFLNEF-----GASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRS 229 (805)
Q Consensus 156 ~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~p~i~~~~-----g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~ 229 (805)
+.+++++.+++++.+..+. +++. ...+...|.+..++ +.+..+.+++.+.+.+++.++.+++|+++||+|||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~ 87 (502)
T TIGR00887 9 PFGWQHFRAIVIAGVGFFT-DSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKR 87 (502)
T ss_pred ccCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 3344556666666555553 4444 45666667776643 345667889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCc------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhh
Q psy10046 230 MTIVAGIISGVGFVLSCFSRT------IEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTV 302 (805)
Q Consensus 230 vlii~~~l~~i~~i~~a~a~~------~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~l 302 (805)
++++++++++++.++++++.+ ++.+++ +|++.|++.|...+....++.+++| ++||+++++...+..+|.++
T Consensus 88 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~ 166 (502)
T TIGR00887 88 VYGMELIIMIIATVASGLSPGSSPKSVMATLCF-WRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILA 166 (502)
T ss_pred HHHHHHHHHHHHHHHHHHccCcccchHHHHHHH-HHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998766 566645 7999999999999999999999998 77999999999999999999
Q ss_pred HHHHHHHHhh-----------------------ccchHHHHHHHHHHHHHHHHHHH-hccCCchhhhhhchH
Q psy10046 303 YAPITSYLIS-----------------------EYGWRGTVLLLSGTFFNLCVCGA-IMRDPEWWTLEQNKE 350 (805)
Q Consensus 303 gp~i~~~l~~-----------------------~~gWr~~f~i~~~~~~~~~i~~~-~~~~p~~~~~~~~~~ 350 (805)
++.++.++.. ..+||+.|.+.++..++.++..+ +.++|+|+..+++.+
T Consensus 167 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~ 238 (502)
T TIGR00887 167 GAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDV 238 (502)
T ss_pred HHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcch
Confidence 9988876542 24799999877766655544433 356678887766654
No 36
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.95 E-value=3.5e-25 Score=249.48 Aligned_cols=174 Identities=14% Similarity=0.157 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q psy10046 162 WMVVLAAFFINMAGDGIAFSFGLLYIEFLN-EFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGV 240 (805)
Q Consensus 162 w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~-~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i 240 (805)
+..+....+..+..+..-+.++++.+.+.+ +||+|.++.+++.+++.++++++.++.|++.||+|.|+++.++.+++++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 455555555555555666778888788876 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhc-----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHh---
Q psy10046 241 GFVLSCFS-----RTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLI--- 311 (805)
Q Consensus 241 ~~i~~a~a-----~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~--- 311 (805)
.+++++++ ++++.+++ +|++.|++ +..++.....++.|+| ++||+++|++.....+|..+++++...++
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli-~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~ 190 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIV-IALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVP 190 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHH-HHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999987 89999866 69999998 6678889999999998 56999999997666666655554443322
Q ss_pred --h-------------ccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 312 --S-------------EYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 312 --~-------------~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
. ..+||..+++..++.++..++.+++
T Consensus 191 l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 191 VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 3348888888887777666666665
No 37
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.95 E-value=1e-25 Score=257.40 Aligned_cols=156 Identities=19% Similarity=0.155 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHhCCC--------hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC--
Q psy10046 180 FSFGLLYIEFLNEFGAS--------KSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR-- 249 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s--------~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~-- 249 (805)
..++..++.+..+++.+ ..+.+++.+++.++.+++.+++|+++||+|||++++++.++++++.+++++..
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~ 124 (481)
T TIGR00879 45 GVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFA 124 (481)
T ss_pred chhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34556667778887776 89999999999999999999999999999999999999999999999886543
Q ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHH---HHHhhccchHHHHHHHH
Q psy10046 250 -TIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPIT---SYLISEYGWRGTVLLLS 324 (805)
Q Consensus 250 -~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~---~~l~~~~gWr~~f~i~~ 324 (805)
+++.+++ .|++.|++.+...+...+++.+++| ++|+++++++..+..+|.+++++++ +.+....|||+.|++.+
T Consensus 125 ~~~~~~~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~ 203 (481)
T TIGR00879 125 LSVEMLIV-GRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQL 203 (481)
T ss_pred cchHHHHH-HHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHH
Confidence 3446645 7999999999999999999999987 7799999999999999999999999 66667789999999966
Q ss_pred HHHHHHHHHHHh
Q psy10046 325 GTFFNLCVCGAI 336 (805)
Q Consensus 325 ~~~~~~~i~~~~ 336 (805)
+..++.++..++
T Consensus 204 ~~~~~~~~~~~~ 215 (481)
T TIGR00879 204 IPAGLLFLGLFF 215 (481)
T ss_pred HHHHHHHHHHhc
Confidence 555544444433
No 38
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.95 E-value=1.7e-25 Score=256.37 Aligned_cols=176 Identities=14% Similarity=0.160 Sum_probs=139.2
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISG 239 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~ 239 (805)
++|.++...++.....+.....++...|++.++ |++..+.+++.+++.++++++++++|+++||+|||++++++.++++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~ 104 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH
Confidence 346655555554444444445567778888888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC----cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHh-hHHHHHHHHhhc
Q psy10046 240 VGFVLSCFSR----TIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTT-VYAPITSYLISE 313 (805)
Q Consensus 240 i~~i~~a~a~----~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~-lgp~i~~~l~~~ 313 (805)
++.+++++++ +++.+++ +|++.|++.+..++.....+.+++| ++|+++++++..+..+|.. ++|+++..+...
T Consensus 105 i~~~~~~~~~~~~~~~~~~~~-~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 105 AVMLFMGFVPWATSSIAVMFV-LLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred HHHHHHHhhhcccccHHHHHH-HHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 9999888753 6666655 6999999999888877788888887 6799999999999998875 455544444444
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 314 YGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 314 ~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
.|||+.|++.+++.++..++.+++
T Consensus 184 ~gw~~~f~i~~~~~~~~~~l~~~~ 207 (452)
T PRK11273 184 NDWHAALYMPAFAAILVALFAFAM 207 (452)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 599999999887776655554443
No 39
>PRK09952 shikimate transporter; Provisional
Probab=99.94 E-value=4.9e-25 Score=251.45 Aligned_cols=168 Identities=17% Similarity=0.191 Sum_probs=130.2
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHH-HHHHh--CCChhHHHHHH-----HHHHHHHHHHHHHHHHHHhhhCChHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIE-FLNEF--GASKSKTAWIG-----SLFMAVPLLLGPVASAFVEKFGCRSMT 231 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~-i~~~~--g~s~~~~~l~~-----s~~~lg~~ig~l~~G~LsDr~Grr~vl 231 (805)
++|..++.+++..++.+.....++.+.|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 44555555555555443434556666554 45565 67765 34443 345567789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCcHHH-------HHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhH
Q psy10046 232 IVAGIISGVGFVLSCFSRTIEH-------MYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVY 303 (805)
Q Consensus 232 ii~~~l~~i~~i~~a~a~~~~~-------l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lg 303 (805)
++++++++++++++++++++.. +++.+|+++|++.|+.++....++.|++| ++|++..+....+..+|.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999873 23447999999999999999999999998 779999999999999999998
Q ss_pred HHHHHHHhh--------ccchHHHHHHHHHHHH
Q psy10046 304 APITSYLIS--------EYGWRGTVLLLSGTFF 328 (805)
Q Consensus 304 p~i~~~l~~--------~~gWr~~f~i~~~~~~ 328 (805)
+.+...+.. .+|||+.|++.++..+
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 887776653 5799999998766543
No 40
>TIGR00898 2A0119 cation transport protein.
Probab=99.94 E-value=1.9e-26 Score=267.80 Aligned_cols=170 Identities=22% Similarity=0.321 Sum_probs=147.8
Q ss_pred HHHHHHHHHhCCC---hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Q psy10046 184 LLYIEFLNEFGAS---KSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGL 260 (805)
Q Consensus 184 ~~~p~i~~~~g~s---~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~ 260 (805)
...+.+.++||++ ..+.+++.+++.++++++.+++|+++||+|||++++++.++.+++.++++++++++.+++ +|+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~r~ 188 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLV-FRL 188 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHH-HHH
Confidence 4567888999998 899999999999999999999999999999999999999999999999999999999866 699
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHh-cc
Q psy10046 261 LAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAI-MR 338 (805)
Q Consensus 261 l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~-~~ 338 (805)
+.|++.++..+...+++.+++| ++|+++.+++..+..+|.++++.+++.+.+ ||+.|++.++..++.++..++ .+
T Consensus 189 l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 189 LVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred HHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999997 679999999999999999999998877653 999999988877666555544 34
Q ss_pred CCchhhhhhchHHHHHhhh
Q psy10046 339 DPEWWTLEQNKEKDLKSIK 357 (805)
Q Consensus 339 ~p~~~~~~~~~~~~~~~l~ 357 (805)
+|+|+..+++.+++.+.++
T Consensus 266 sp~~l~~~~~~~~a~~~l~ 284 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQ 284 (505)
T ss_pred ChHHHHHCCCHHHHHHHHH
Confidence 5677777777766665443
No 41
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.94 E-value=4.8e-25 Score=244.44 Aligned_cols=160 Identities=18% Similarity=0.273 Sum_probs=130.6
Q ss_pred HhHHHHHHHHHHHHH-HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC-cH
Q psy10046 174 AGDGIAFSFGLLYIE-FLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR-TI 251 (805)
Q Consensus 174 ~~~~~~~~~~~~~p~-i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~-~~ 251 (805)
+.+.....++++.|. +.+++|++..+++++.+++.++++++.+++|+++||+|||++++++.++.+++.+++++++ ++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~ 91 (366)
T TIGR00886 12 LSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSY 91 (366)
T ss_pred HHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 334445667778884 8899999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhh----------ccchHHHH
Q psy10046 252 EHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLIS----------EYGWRGTV 320 (805)
Q Consensus 252 ~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~----------~~gWr~~f 320 (805)
+.+++ .|++.|++.+. ......++.+++| ++|++++++...+..+|..+++.+++.+.. +.+|||.|
T Consensus 92 ~~~~~-~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~ 169 (366)
T TIGR00886 92 SVLLL-LRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAF 169 (366)
T ss_pred HHHHH-HHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchh
Confidence 98866 69999998654 5566778888887 779999999997777777777777766554 34899999
Q ss_pred HH-HHHHHHHHHHHHH
Q psy10046 321 LL-LSGTFFNLCVCGA 335 (805)
Q Consensus 321 ~i-~~~~~~~~~i~~~ 335 (805)
++ .+++.++..++.+
T Consensus 170 ~~~~~~~~~~~~~~~~ 185 (366)
T TIGR00886 170 VIVPAGILLLPALLIF 185 (366)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 54 3554444444433
No 42
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.94 E-value=1e-25 Score=249.55 Aligned_cols=148 Identities=20% Similarity=0.208 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Q psy10046 179 AFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTF 258 (805)
Q Consensus 179 ~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~ 258 (805)
..++++++|.+.+++|++..+++++.+++.+++.++.++.|+++||+|||++++++.++.+++.+++ .+++++.+++ .
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~-~ 93 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFA-G 93 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHH-H
Confidence 3456778899999999999999999999999999999999999999999999999999888888877 7788888755 6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc--chHHHHHHHHHHHH
Q psy10046 259 GLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEY--GWRGTVLLLSGTFF 328 (805)
Q Consensus 259 R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~--gWr~~f~i~~~~~~ 328 (805)
|++.|++.+...+....++.++++++|+++++++..+..+|..+++.+++.+.+.. +||+.|.+.+++.+
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 99999999988877778888999989999999999999999999999999888765 39999887665443
No 43
>PRK11043 putative transporter; Provisional
Probab=99.94 E-value=1.4e-24 Score=244.48 Aligned_cols=162 Identities=11% Similarity=0.130 Sum_probs=141.0
Q ss_pred hHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHH
Q psy10046 175 GDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHM 254 (805)
Q Consensus 175 ~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l 254 (805)
.+.....+.+.+|.+.+++|.+..+++++.+++.+++.++.+++|+++||+|||++++++.++.+++.++++++++++.+
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l 97 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQL 97 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 33444555666788899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q psy10046 255 YLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 255 ~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~ 333 (805)
++ .|++.|++.+...+...+++.++++ ++++.+.+.......+|.+++|++++++.+.+|||+.|++.+++.++..++
T Consensus 98 ~~-~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 176 (401)
T PRK11043 98 LV-LRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILP 176 (401)
T ss_pred HH-HHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 66 6999999988877777788888887 568888888888889999999999999999999999999988777766555
Q ss_pred HHhc
Q psy10046 334 GAIM 337 (805)
Q Consensus 334 ~~~~ 337 (805)
.+++
T Consensus 177 ~~~~ 180 (401)
T PRK11043 177 TLRL 180 (401)
T ss_pred HHHc
Confidence 5443
No 44
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.94 E-value=1e-24 Score=252.59 Aligned_cols=165 Identities=19% Similarity=0.272 Sum_probs=145.7
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISG 239 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~ 239 (805)
.+|..+..+++..++........+.++|.+.+++|++..+++++.+++.++++++.+++|+++||+|||++++++.++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 45666666665555544444567777899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHH
Q psy10046 240 VGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRG 318 (805)
Q Consensus 240 i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~ 318 (805)
++.++++++++++.+++ .|++.|++.++..+....++.+++| ++|+++++++..+..+|.+++|.+++++.+.+|||+
T Consensus 97 ~~~~~~~~~~~~~~l~~-~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 175 (496)
T PRK03893 97 VGTLACGFAPGYWTLFI-ARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRA 175 (496)
T ss_pred HHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Confidence 99999999999999866 6999999999999999999998887 679999999999999999999999999999999999
Q ss_pred HHHHHHH
Q psy10046 319 TVLLLSG 325 (805)
Q Consensus 319 ~f~i~~~ 325 (805)
.|++.++
T Consensus 176 ~f~~~~~ 182 (496)
T PRK03893 176 LFFIGIL 182 (496)
T ss_pred HHHHHHH
Confidence 9987433
No 45
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=2.6e-24 Score=242.54 Aligned_cols=156 Identities=20% Similarity=0.266 Sum_probs=137.3
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q psy10046 180 FSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFG 259 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R 259 (805)
..++.+.+++.+++|++..+++++.+++.++..+..+++|+++||+|||++++++.++.+++.++++++++++.+++ .|
T Consensus 28 ~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~ 106 (400)
T PRK11646 28 VVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWL-SC 106 (400)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHH-HH
Confidence 34445555678899999999999999999999999999999999999999999999999999999999999998866 69
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
++.|++.+...+...+++.+++| ++|++++++......+|..+||++++++. .+|||+.|++.+++.++..++..++
T Consensus 107 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~ 184 (400)
T PRK11646 107 ILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWL 184 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998888888888888886 78999999999999999999999999998 6899999999887766655444433
No 46
>PRK15075 citrate-proton symporter; Provisional
Probab=99.94 E-value=1.3e-24 Score=247.81 Aligned_cols=164 Identities=21% Similarity=0.179 Sum_probs=132.2
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHH-----HHHHHHHHHHHHHHhhhCChHHHHHH
Q psy10046 161 GWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAW-IGSLFM-----AVPLLLGPVASAFVEKFGCRSMTIVA 234 (805)
Q Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l-~~s~~~-----lg~~ig~l~~G~LsDr~Grr~vlii~ 234 (805)
||......++..++.+.....++...|.+.++++.+..+.+. ..+... ++..++++++|+++||+|||++++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 455666666666666666678899999999999988776543 333322 23357889999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcHHH-------HHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHH
Q psy10046 235 GIISGVGFVLSCFSRTIEH-------MYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPI 306 (805)
Q Consensus 235 ~~l~~i~~i~~a~a~~~~~-------l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i 306 (805)
++++++++++++++++++. +++++|+++|++.+...+....++++++| ++|++++++...+..+|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999874 23447999999999988888899999998 779999999998888888888887
Q ss_pred HHHHh--------hccchHHHHHHHH
Q psy10046 307 TSYLI--------SEYGWRGTVLLLS 324 (805)
Q Consensus 307 ~~~l~--------~~~gWr~~f~i~~ 324 (805)
++.+. +.+|||++|++.+
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHH
Confidence 77653 4689999998754
No 47
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=1.4e-24 Score=244.28 Aligned_cols=146 Identities=18% Similarity=0.105 Sum_probs=124.3
Q ss_pred HHHHHHH-HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc---C-----cHH
Q psy10046 182 FGLLYIE-FLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS---R-----TIE 252 (805)
Q Consensus 182 ~~~~~p~-i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a---~-----~~~ 252 (805)
..+++|. +.+++|.+..+++++.+++.++++++++++|+++||+|||++++++.++++++.++++++ . +++
T Consensus 34 ~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (399)
T PRK05122 34 PLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLL 113 (399)
T ss_pred HHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHH
Confidence 3444454 678899999999999999999999999999999999999999999999888876665543 2 345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHH
Q psy10046 253 HMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFF 328 (805)
Q Consensus 253 ~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~ 328 (805)
.+++ .|++.|++.+...+....++.++.| ++|++++++...+..+|.++|+.+++++.+..||++.+++.+++.+
T Consensus 114 ~l~~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 114 LLLL-GRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLAL 189 (399)
T ss_pred HHHH-HHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 5645 6999999999988888888887776 7899999999999999999999999999999999999887655443
No 48
>PRK10133 L-fucose transporter; Provisional
Probab=99.94 E-value=3.8e-24 Score=243.84 Aligned_cols=131 Identities=15% Similarity=0.113 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH---HhcCcHHHHHH
Q psy10046 180 FSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLS---CFSRTIEHMYL 256 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~---a~a~~~~~l~i 256 (805)
...+++.|.+++++|++..+.++..+.+.++++++.++.|+++||+|||+++++++++++++++++ +++++++.+++
T Consensus 43 ~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~ 122 (438)
T PRK10133 43 NLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLV 122 (438)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 567778899999999999999999999999999999999999999999999999999999999875 56889998866
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccc-chhHHHHHHHHHhhHHHhhHHHHHHHHh
Q psy10046 257 TFGLLAGIGLALSYVTAVVSIAFWFEK-KRGLACSLGSTGTGFGTTVYAPITSYLI 311 (805)
Q Consensus 257 ~~R~l~G~g~g~~~~~~~~~l~~~~p~-~rg~a~gi~~~~~~lG~~lgp~i~~~l~ 311 (805)
.|+++|+|.|...+....++.++.++ +|+..+++++.+..+|..+++.+++.+.
T Consensus 123 -~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 123 -GLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred -HHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999998888774 4556799999999999999999987654
No 49
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.94 E-value=2.8e-24 Score=240.63 Aligned_cols=137 Identities=15% Similarity=0.094 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Q psy10046 179 AFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTF 258 (805)
Q Consensus 179 ~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~ 258 (805)
.....+++|.+.+++|.|..+++++.+++.+++.++++++|+++||+|||+++.++.++++++.++++++++++.+++ .
T Consensus 22 ~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 100 (381)
T PRK03633 22 IAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLA-W 100 (381)
T ss_pred hhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH-H
Confidence 345677789999999999999999999999999999999999999999999999999999999999999999999866 6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccch
Q psy10046 259 GLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGW 316 (805)
Q Consensus 259 R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gW 316 (805)
|++.|++.+...+.....+.+..+ ++|+++++++..+..+|..+||.+++.+.+...|
T Consensus 101 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 159 (381)
T PRK03633 101 RFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMS 159 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 999999999888877777775554 7899999999999999999999999998775433
No 50
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=3.2e-24 Score=241.92 Aligned_cols=146 Identities=16% Similarity=0.131 Sum_probs=120.7
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH---hc-CcHHHHHHHHHH
Q psy10046 185 LYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSC---FS-RTIEHMYLTFGL 260 (805)
Q Consensus 185 ~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a---~a-~~~~~l~i~~R~ 260 (805)
+++.+.+++|++..+++++.+.+.+++.++.+++|+++||+|||++++++.++++++.+++. +. .+++.+++ .|+
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~ 113 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILL-FYG 113 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHH-HHH
Confidence 34566789999999999999999999999999999999999999999999999988876553 33 56777655 699
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHH-hhHHHHHHHHhhccchHHHHHHHHHHHHHHH
Q psy10046 261 LAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGT-TVYAPITSYLISEYGWRGTVLLLSGTFFNLC 331 (805)
Q Consensus 261 l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~-~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~ 331 (805)
+.|++.+...+...+.+.+++| ++|++++|+...+..+|. +++|++++++.+..||+..+|......++..
T Consensus 114 i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 186 (402)
T TIGR00897 114 IRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGG 186 (402)
T ss_pred HHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 9999988877777777777665 889999999999999997 5899999999988998777766554433333
No 51
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.94 E-value=4.6e-24 Score=239.75 Aligned_cols=165 Identities=15% Similarity=0.151 Sum_probs=141.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCc
Q psy10046 171 INMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRT 250 (805)
Q Consensus 171 ~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~ 250 (805)
..++.......+.+.+|.+.+++|++..+.+++.+++.+++.++.+++|+++||+|||++++++.++.+++.+++.++++
T Consensus 16 ~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~ 95 (394)
T PRK11652 16 LVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHS 95 (394)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 33333344455666679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHH
Q psy10046 251 IEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFN 329 (805)
Q Consensus 251 ~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~ 329 (805)
++.+++ .|++.|++.+...+....+..++++ ++++++++++..+..+|..++|++++++.+..|||+.|++.+++.++
T Consensus 96 ~~~l~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~ 174 (394)
T PRK11652 96 LTVLIA-ASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAG 174 (394)
T ss_pred HHHHHH-HHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Confidence 998866 6999999988877777777777776 67999999999999999999999999999989999999998876665
Q ss_pred HHHHHHh
Q psy10046 330 LCVCGAI 336 (805)
Q Consensus 330 ~~i~~~~ 336 (805)
..++..+
T Consensus 175 ~~~~~~~ 181 (394)
T PRK11652 175 VTFSMAR 181 (394)
T ss_pred HHHHHHH
Confidence 5444433
No 52
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.93 E-value=5.3e-24 Score=240.57 Aligned_cols=331 Identities=15% Similarity=0.097 Sum_probs=251.3
Q ss_pred HHHhHHHHH-HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh---
Q psy10046 172 NMAGDGIAF-SFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCF--- 247 (805)
Q Consensus 172 ~~~~~~~~~-~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~--- 247 (805)
.++.++..+ ..++++|.+++++|++..+.+++.+.+.+++.++.++.|++.||+|||+++++++++++++.+++..
T Consensus 11 ~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~ 90 (410)
T TIGR00885 11 LFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE 90 (410)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 334455554 4568889999999999999999999999999999999999999999999999999999999888643
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhc-------------
Q psy10046 248 SRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISE------------- 313 (805)
Q Consensus 248 a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~------------- 313 (805)
.++++.+++ .|++.|+|.|...+....++.+..| ++|++++++.+.+..+|..++|.+++.+...
T Consensus 91 ~~~~~~~l~-~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~ 169 (410)
T TIGR00885 91 IMNYTLFLV-GLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKL 169 (410)
T ss_pred hccHHHHHH-HHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhc
Confidence 468888756 6999999999999999999887776 6799999999999999999999999877532
Q ss_pred -------------cchHHHHHHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHH
Q psy10046 314 -------------YGWRGTVLLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLK 380 (805)
Q Consensus 314 -------------~gWr~~f~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 380 (805)
.+||++|++.+++.++.+++..+.+.|+. +. ++. +
T Consensus 170 ~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~---~~--~~~-~-------------------------- 217 (410)
T TIGR00885 170 SPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPAL---NH--SDA-K-------------------------- 217 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC---Cc--ccc-c--------------------------
Confidence 36999999988876665544433322210 00 000 0
Q ss_pred HHHhcCCCccchhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhh
Q psy10046 381 EMLESGVTPDFIETSVATELNAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLR 460 (805)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (805)
++
T Consensus 218 --------------------------------------------------------------------------~~---- 219 (410)
T TIGR00885 218 --------------------------------------------------------------------------QI---- 219 (410)
T ss_pred --------------------------------------------------------------------------cc----
Confidence 00
Q ss_pred hhhchhhhccccCCCCCCCcccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCc
Q psy10046 461 QLQKTLSAEADRASEPRGKPLVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPT 540 (805)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (805)
T Consensus 220 -------------------------------------------------------------------------------- 219 (410)
T TIGR00885 220 -------------------------------------------------------------------------------- 219 (410)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccchhhhhhcCCCccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhh
Q psy10046 541 HYLKHLKVHRYLWVQILVNGGHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWI 620 (805)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (805)
.
T Consensus 220 ~------------------------------------------------------------------------------- 220 (410)
T TIGR00885 220 S------------------------------------------------------------------------------- 220 (410)
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred eeccccccccccccCccchhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhc--CCChhhHHHH
Q psy10046 621 IISGILIAVIPFTENTSWMDDARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQ--GLSKEEATSI 698 (805)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~--G~s~~~a~~~ 698 (805)
..+.. .+++|+|.++..++..++..........|++.|.++. +.+...++..
T Consensus 221 ---------------------~~~~~-----~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~ 274 (410)
T TIGR00885 221 ---------------------FSASL-----SRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANY 274 (410)
T ss_pred ---------------------chhhH-----HHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHH
Confidence 00000 1346777788877777777777767778999998764 4455555656
Q ss_pred HHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhcc
Q psy10046 699 LSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELV 778 (805)
Q Consensus 699 ~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~ 778 (805)
.+.+..+.++||++++++.|| +++++++.++.++++++++++.. .++.. .....++.|++.+..||..+.+..+..
T Consensus 275 ~~~~~~~~~vGR~~~~~l~~r--~~~~~~l~i~~~~~~~~~ll~~~-~~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~ 350 (410)
T TIGR00885 275 NIGAMVIFFISRFIGTWLISY--LAAHKVLMAYAIIGMALCLGSIF-AGGHV-GLYCLTLCSAFMSLMFPTIYGIALKGL 350 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHH-cCChH-HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 666778889999999999999 99999888888888888777763 33333 355667778888899999999999999
Q ss_pred CccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 779 PLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 779 ~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+++....+.++...+ +|++++|++
T Consensus 351 g~~~~~~s~~l~~~~--~Gga~~p~l 374 (410)
T TIGR00885 351 GQDTKYGAAGLVMAI--IGGGIVPPL 374 (410)
T ss_pred hhhhhhhHHHHHHHH--hccchHHHH
Confidence 877665566665554 888888864
No 53
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.93 E-value=8.1e-24 Score=238.33 Aligned_cols=156 Identities=17% Similarity=0.181 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHhCCChhH-----HHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHH
Q psy10046 180 FSFGLLYIEFLNEFGASKSK-----TAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHM 254 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~-----~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l 254 (805)
..+.+++|.+.+++|++..+ .+++.+++.++..++.+++|+++||+|||++++++.++.+++.++++++++++.+
T Consensus 31 ~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (408)
T PRK09874 31 SLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQF 110 (408)
T ss_pred HHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 45666788899999988554 4889999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q psy10046 255 YLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 255 ~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~ 333 (805)
++ .|++.|++.+ ..+....++.+++| ++|++++++...+..+|.+++|++++.+.+..|||+.|++.+++.++..+.
T Consensus 111 ~~-~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (408)
T PRK09874 111 LI-LRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLV 188 (408)
T ss_pred HH-HHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 66 6999999765 45666677777776 779999999999999999999999999999999999999988877666555
Q ss_pred HHhc
Q psy10046 334 GAIM 337 (805)
Q Consensus 334 ~~~~ 337 (805)
.+++
T Consensus 189 ~~~~ 192 (408)
T PRK09874 189 TLFC 192 (408)
T ss_pred HHHH
Confidence 5443
No 54
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.93 E-value=1e-23 Score=238.75 Aligned_cols=159 Identities=13% Similarity=0.102 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Q psy10046 177 GIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYL 256 (805)
Q Consensus 177 ~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i 256 (805)
.....+.+.+|.+.+++|.+..+.++..+++.++++++++++|+++||+|||++++++.++++++.++++++++++.+++
T Consensus 30 ~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~ 109 (413)
T PRK15403 30 LTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLI 109 (413)
T ss_pred HHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 33355666678999999999999999999999999999999999999999999999999999999999999999999866
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q psy10046 257 TFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGA 335 (805)
Q Consensus 257 ~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~ 335 (805)
.|+++|++.+...+...+++.++++ ++++++++++..+..+|+++||++++++.++.|||+.|++.+++.++.++..+
T Consensus 110 -~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 110 -ARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 6999999988766667777778887 66899999999999999999999999999989999999998887776655544
Q ss_pred h
Q psy10046 336 I 336 (805)
Q Consensus 336 ~ 336 (805)
+
T Consensus 189 ~ 189 (413)
T PRK15403 189 L 189 (413)
T ss_pred H
Confidence 3
No 55
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.93 E-value=3.4e-24 Score=234.44 Aligned_cols=305 Identities=25% Similarity=0.304 Sum_probs=266.8
Q ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Q psy10046 177 GIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYL 256 (805)
Q Consensus 177 ~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i 256 (805)
..........|.+.+++|.+..+.+++.+++.++..++.+++|+++||+|||+.++++.++..++.++.+++++++.+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (352)
T cd06174 13 LDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLV 92 (352)
T ss_pred HhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 33455667778899999999999999999999999999999999999999999999999999999999999999998866
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q psy10046 257 TFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGA 335 (805)
Q Consensus 257 ~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~ 335 (805)
.|++.|++.+...+...+++.+++| ++|++++++...+..+|..++|.+++.+.+..+||+.|++.+++.++..++.+
T Consensus 93 -~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
T cd06174 93 -GRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLL 171 (352)
T ss_pred -HHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999998 58999999999999999999999999999999999999998877666655544
Q ss_pred hccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhcccccccccccccccccc
Q psy10046 336 IMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKFSSVINIPT 415 (805)
Q Consensus 336 ~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (805)
+..
T Consensus 172 ~~~----------------------------------------------------------------------------- 174 (352)
T cd06174 172 FLL----------------------------------------------------------------------------- 174 (352)
T ss_pred HHH-----------------------------------------------------------------------------
Confidence 321
Q ss_pred ccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCCCCCCCCCc
Q psy10046 416 YIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSVESDGPHEP 495 (805)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (805)
T Consensus 175 -------------------------------------------------------------------------------- 174 (352)
T cd06174 175 -------------------------------------------------------------------------------- 174 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCccccccccccccc
Q psy10046 496 LVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDFLHSKLGVR 575 (805)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (805)
T Consensus 175 -------------------------------------------------------------------------------- 174 (352)
T cd06174 175 -------------------------------------------------------------------------------- 174 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHHHhhhccccch
Q psy10046 576 RDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIVGMFDFSMF 655 (805)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 655 (805)
T Consensus 175 -------------------------------------------------------------------------------- 174 (352)
T cd06174 175 -------------------------------------------------------------------------------- 174 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhc-CCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchh-HHHHHHH
Q psy10046 656 LELHFLLVSISTILLFTWFVIPYFYLTDFVTNQ-GLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKK-TYAACLI 733 (805)
Q Consensus 656 ~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~-G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~-~~~~~~~ 733 (805)
|.++...+..++..........+.|.+.++. |.+..+.+.+....+++.++++++.+++.|| +++|+ .+..+.+
T Consensus 175 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~ 250 (352)
T cd06174 175 --RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDR--LGRRRLLLLIGLL 250 (352)
T ss_pred --HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhhHHHHHHHH
Confidence 2244555556666667777788899998875 9999999999999999999999999999999 99998 8888888
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 734 GCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 734 ~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+.+++.+.+. ..++.+...+..++.|++.+...+....++.+.+|++++++.+|+.++...+|++++|.+
T Consensus 251 ~~~i~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i 320 (352)
T cd06174 251 LAALGLLLLA-LAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLL 320 (352)
T ss_pred HHHHHHHHHH-HhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877776 445577778888899999999999999999999999999999999999999999988764
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.93 E-value=1.7e-23 Score=234.98 Aligned_cols=158 Identities=13% Similarity=0.135 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Q psy10046 179 AFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTF 258 (805)
Q Consensus 179 ~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~ 258 (805)
...+.+.+|.+.+++|.+..+.++..+++.+++.++.++.|+++||+|||++++++.++++++.+++.++++++.+++ .
T Consensus 19 ~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~ 97 (392)
T PRK10473 19 IDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLA-G 97 (392)
T ss_pred HHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHH-H
Confidence 344556789999999999999999999999999999999999999999999999999999999999999999988866 6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 259 GLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 259 R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
|++.|++.+...+...+++.+++| ++|++++++......+|.+++|++++.+.+..|||+.|++.+++.++..++.++.
T Consensus 98 ~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~ 177 (392)
T PRK10473 98 RFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFI 177 (392)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888888899998887 7899999999999999999999999998888999999999887777666655443
No 57
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.93 E-value=6.6e-24 Score=235.93 Aligned_cols=154 Identities=12% Similarity=0.058 Sum_probs=125.7
Q ss_pred HHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHH-HHHHHHHHHHHHHhcCcHHHHHHHHHH
Q psy10046 183 GLLYI-EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIV-AGIISGVGFVLSCFSRTIEHMYLTFGL 260 (805)
Q Consensus 183 ~~~~p-~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii-~~~l~~i~~i~~a~a~~~~~l~i~~R~ 260 (805)
.+.+| ++.+++|.+..+++++.+++.++..+..+++|+++||+|||+.+++ +.++.+++.++++++++++.+++ .|+
T Consensus 17 ~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~ 95 (375)
T TIGR00899 17 FPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLV-LGV 95 (375)
T ss_pred hhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHH-HHH
Confidence 34444 4678899999999999999999999999999999999999887554 56666777888899999998866 588
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-cchhHH--HHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 261 LAGIGLALSYVTAVVSIAFWFE-KKRGLA--CSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 261 l~G~g~g~~~~~~~~~l~~~~p-~~rg~a--~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
+.|.+.+...+...++..++.+ ++|+.+ .++...+..+|.++||++++++.+..|||+.|++.+++.++..++.+++
T Consensus 96 ~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 175 (375)
T TIGR00899 96 LLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLF 175 (375)
T ss_pred HHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 8888877777777777778776 445543 5777888899999999999999999999999999888776666655554
No 58
>PRK12382 putative transporter; Provisional
Probab=99.93 E-value=1.3e-23 Score=235.97 Aligned_cols=145 Identities=12% Similarity=0.070 Sum_probs=121.6
Q ss_pred HHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH---Hh-----cCcH
Q psy10046 181 SFGLLYI-EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLS---CF-----SRTI 251 (805)
Q Consensus 181 ~~~~~~p-~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~---a~-----a~~~ 251 (805)
...+++| ++.+++|++..+++++.+++.++++++++++|+++||+|||++++++.+++.++.+.. ++ ..++
T Consensus 33 ~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (392)
T PRK12382 33 LPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKF 112 (392)
T ss_pred HHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHH
Confidence 3344445 4678999999999999999999999999999999999999999999988777665432 22 2466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHH
Q psy10046 252 EHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGT 326 (805)
Q Consensus 252 ~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~ 326 (805)
+.+++ .|+++|++.+...+...+++.+++| ++|+++++++..+..+|.++||++++++.+..||++.+++..++
T Consensus 113 ~~l~~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 113 ALLVV-GRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVL 187 (392)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 77755 6999999999888888888888886 78999999999999999999999999999999999877755443
No 59
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.93 E-value=4.4e-24 Score=243.65 Aligned_cols=175 Identities=16% Similarity=0.196 Sum_probs=140.4
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q psy10046 161 GWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGV 240 (805)
Q Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i 240 (805)
+|..+...++.....+.....+....|.+.+ +|++..+.+++.+++.+++.++.+++|+++||+|||++++++.+++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 3555555555444444444445556677765 699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhc----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhh-cc
Q psy10046 241 GFVLSCFS----RTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLIS-EY 314 (805)
Q Consensus 241 ~~i~~a~a----~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~-~~ 314 (805)
+.+++++. .+++.+++ .|++.|++.+..++.....+.+++| ++|+++++++..+..+|..+++.+.+.+.. ..
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~-~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 182 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFV-LLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN 182 (438)
T ss_pred HHHHHhccccccchHHHHHH-HHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh
Confidence 98887764 45556645 6999999999888888888889997 779999999999999999999888776544 57
Q ss_pred chHHHHHHHHHHHHHHHHHHHhc
Q psy10046 315 GWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 315 gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
|||+.|++.+++.++..++.+++
T Consensus 183 ~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 183 DWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999888877766555544
No 60
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=7.2e-24 Score=240.15 Aligned_cols=326 Identities=13% Similarity=0.113 Sum_probs=244.5
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-----cCcHHHHH
Q psy10046 181 SFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCF-----SRTIEHMY 255 (805)
Q Consensus 181 ~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~-----a~~~~~l~ 255 (805)
...+.+|.+.++++.+..+++++.+.+.+++.++.+++|+++||+|||++++++.++.+++.++.++ .++++.++
T Consensus 35 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 114 (417)
T PRK10489 35 LLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIY 114 (417)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHH
Confidence 4455678888899999999999999999999999999999999999999999888877777665442 46777775
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Q psy10046 256 LTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCG 334 (805)
Q Consensus 256 i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~ 334 (805)
+ .|++.|++.+...+...+++.++.| ++|+++.++...+..+|.++||.+++.+.+..||+|.|++.++..++..++.
T Consensus 115 ~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 115 L-LGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL 193 (417)
T ss_pred H-HHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 5 6999999988888888888888887 6799999999999999999999999999998999999998776665554443
Q ss_pred HhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhccccccccccccccccc
Q psy10046 335 AIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKFSSVINIP 414 (805)
Q Consensus 335 ~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (805)
+...+.+. . . +
T Consensus 194 ~~l~~~~~----~-~----~------------------------------------------------------------ 204 (417)
T PRK10489 194 LRLPALPP----P-P----Q------------------------------------------------------------ 204 (417)
T ss_pred HhCCCCCC----C-C----c------------------------------------------------------------
Confidence 33211000 0 0 0
Q ss_pred cccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCCCCCCCCC
Q psy10046 415 TYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSVESDGPHE 494 (805)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (805)
.+ +
T Consensus 205 --------------------------~~-------------~-------------------------------------- 207 (417)
T PRK10489 205 --------------------------PR-------------E-------------------------------------- 207 (417)
T ss_pred --------------------------cc-------------c--------------------------------------
Confidence 00 0
Q ss_pred cccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCcccccccccccc
Q psy10046 495 PLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDFLHSKLGV 574 (805)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (805)
...
T Consensus 208 ----------------------------------------------~~~------------------------------- 210 (417)
T PRK10489 208 ----------------------------------------------HPL------------------------------- 210 (417)
T ss_pred ----------------------------------------------cch-------------------------------
Confidence 000
Q ss_pred ccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHHHhhhccccc
Q psy10046 575 RRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIVGMFDFSM 654 (805)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (805)
.+..+.. ...
T Consensus 211 -----------------------------------------------------------------~~~~~~~-----~~~ 220 (417)
T PRK10489 211 -----------------------------------------------------------------RSLLAGF-----RFL 220 (417)
T ss_pred -----------------------------------------------------------------HHHHHHH-----HHH
Confidence 0000000 023
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHH
Q psy10046 655 FLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLI 733 (805)
Q Consensus 655 l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~ 733 (805)
++++.++...+..++... ......++|.|+++ .|++...++++.+..+++.+++.++.+++.|| .++++++..+.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~--~~~~~~l~~~~~ 297 (417)
T PRK10489 221 LASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS--ARPGLLMLLSTL 297 (417)
T ss_pred HcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc--cCcchHHHHHHH
Confidence 455555544444333322 33456678999887 89999999999999999999999999999998 666767777666
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 734 GCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 734 ~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+.+++++++. ...+.+...++.+++|++.+...+....++.+.+|++.||+++|+++++..+|+.+||.+
T Consensus 298 ~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l 367 (417)
T PRK10489 298 GSFLAVGLFG-LMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAAL 367 (417)
T ss_pred HHHHHHHHHH-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHH
Confidence 6666665554 345556666677778888777777778889999999999999999999999999988764
No 61
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=7.9e-24 Score=228.18 Aligned_cols=339 Identities=20% Similarity=0.271 Sum_probs=265.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHH
Q psy10046 163 MVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGF 242 (805)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~ 242 (805)
..+.+..+.....+..-+.++++.+.+.+++|+|..|.+++.++..+..++..++.|.+.||||.|+++++++++..+-+
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~ 93 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPC 93 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHH
Confidence 33334444444444445567777788889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc---
Q psy10046 243 VLSCFSRTIE---HMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG--- 315 (805)
Q Consensus 243 i~~a~a~~~~---~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g--- 315 (805)
+..+++...+ ++++ ++++.|++++ .++.....++.||| +++|.++|+.. ..++|..+..+++..++...|
T Consensus 94 ~~~~~a~~~~~~~~ll~-~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~ 170 (417)
T COG2223 94 LGLAFAVTYPSTWQLLV-IGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLA 170 (417)
T ss_pred HHHHHHccCCchHHHHH-HHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHH
Confidence 9998875444 8755 6999999755 57888899999998 66999999999 888999999999988888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhh
Q psy10046 316 WRGTVLLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETS 395 (805)
Q Consensus 316 Wr~~f~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (805)
|+...++..+..++..+..++..... ++. +...+.
T Consensus 171 w~~~~~i~~~~l~v~~v~~~~~~~d~-------p~~-r~~~~~------------------------------------- 205 (417)
T COG2223 171 WRNVAGIYVVALAIAAVLAWLGMNDV-------PEH-RASVKP------------------------------------- 205 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC-------hhh-hccccc-------------------------------------
Confidence 99999888888877777777653210 000 000000
Q ss_pred hhccccccccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCC
Q psy10046 396 VATELNAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASE 475 (805)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (805)
T Consensus 206 -------------------------------------------------------------------------------- 205 (417)
T COG2223 206 -------------------------------------------------------------------------------- 205 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhh
Q psy10046 476 PRGKPLVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQ 555 (805)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (805)
+
T Consensus 206 --------------------------------------------------------~----------------------- 206 (417)
T COG2223 206 --------------------------------------------------------Q----------------------- 206 (417)
T ss_pred --------------------------------------------------------c-----------------------
Confidence 0
Q ss_pred hhhcCCCccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccC
Q psy10046 556 ILVNGGHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTEN 635 (805)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (805)
T Consensus 207 -------------------------------------------------------------------------------- 206 (417)
T COG2223 207 -------------------------------------------------------------------------------- 206 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheee
Q psy10046 636 TSWMDDARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALG 714 (805)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g 714 (805)
.+..-..++++++.|.+++..+..+.++..+..++|.|+++ +|.++..++.+.....+.+.+.|.++|
T Consensus 207 -----------~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG 275 (417)
T COG2223 207 -----------LPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGG 275 (417)
T ss_pred -----------chhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccc
Confidence 00000145678899999999999999999999999999996 899999999999999999999999999
Q ss_pred eecCCCCccchhHHHHHHHHHHHHHhhhhhhh------hhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhH
Q psy10046 715 WACDQPWLNVKKTYAACLIGCGVSTALMPLFA------TNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYG 788 (805)
Q Consensus 715 ~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~g 788 (805)
+|+|| ++.++.+.+.++++.++..++.... .+....+...+..+++.|.....++-+++.+++ +..|.+.|
T Consensus 276 ~LsDR--~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G 352 (417)
T COG2223 276 WLSDR--IGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTG 352 (417)
T ss_pred hhhhh--ccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHH
Confidence 99999 9988888887777777766655333 334455555556666667667777777777774 47799999
Q ss_pred HHHHHHhhhhccCC
Q psy10046 789 LTLLAQGIGNLVGP 802 (805)
Q Consensus 789 l~~~~~~ig~~igp 802 (805)
+..+.+++|+.+-|
T Consensus 353 ~vga~G~lGGf~lp 366 (417)
T COG2223 353 IVGAIGGLGGFFLP 366 (417)
T ss_pred HHHHhccccccchh
Confidence 99999999987655
No 62
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.93 E-value=1.1e-23 Score=234.78 Aligned_cols=157 Identities=12% Similarity=0.133 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q psy10046 180 FSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFG 259 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R 259 (805)
..+.+.+|.+.+++|++..+++++.+++.++..++.+++|+++||+|||++++++.++.+++.++++++++++.+++ +|
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~ 86 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY-MR 86 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH-HH
Confidence 34556778999999999999999999999999999999999999999999999999999999999999999998866 69
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
++.|++.+...+...+++.+++| ++|++++++...+..+|..++|++++.+.+..|||+.|++.+++.++..++.++.
T Consensus 87 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 87 FLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988888899999887 6799999999999999999999999999999999999998887776665555443
No 63
>PTZ00207 hypothetical protein; Provisional
Probab=99.93 E-value=4e-23 Score=238.80 Aligned_cols=179 Identities=16% Similarity=0.214 Sum_probs=147.5
Q ss_pred CchhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q psy10046 158 GGWGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGII 237 (805)
Q Consensus 158 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l 237 (805)
...||..+++.+++.. ..+..+.++++.+.+.+++|++..+++++.++. ..++++.++.|+++||+|+|++++++.++
T Consensus 23 e~~Rw~~lva~~~~~~-~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 23 EPRRFALLVLGAFCSI-CTSFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred ccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 3467877777666555 446678888899999999999999999998874 45566788899999999999999999999
Q ss_pred HHHHHHHHHhc------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHh
Q psy10046 238 SGVGFVLSCFS------RTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLI 311 (805)
Q Consensus 238 ~~i~~i~~a~a------~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~ 311 (805)
+++++++++++ .+++.+++ +|++.|+|.+...+....++.+|||++||+++|+...+.++|.++.+.+...+.
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l-~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSV-YNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 68888867 699999999988888888888999999999999999999999986555554444
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHh-ccCC
Q psy10046 312 SEYGWRGTVLLLSGTFFNLCVCGAI-MRDP 340 (805)
Q Consensus 312 ~~~gWr~~f~i~~~~~~~~~i~~~~-~~~p 340 (805)
. .+|++.|++.+++.+++.++.++ ++.|
T Consensus 180 ~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p 208 (591)
T PTZ00207 180 S-DNTSAYFFFLMSFALVVGILAIVFMRLP 208 (591)
T ss_pred H-HhHHHHHHHHHHHHHHHHHHHHhheeCC
Confidence 3 47999999998877776666554 4444
No 64
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.93 E-value=9e-24 Score=242.61 Aligned_cols=389 Identities=17% Similarity=0.142 Sum_probs=254.2
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q psy10046 180 FSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFG 259 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R 259 (805)
...+..++++..++|-+ ....|+.+.+.++.+++.++.|+|+|.||||++++++.++..+|+++++.++|...++. .-
T Consensus 61 ~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~ia-g~ 138 (599)
T PF06609_consen 61 VLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIA-GM 138 (599)
T ss_pred hccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHH-HH
Confidence 33455678999999964 67889999999999999999999999999999999999999999999999999999955 57
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH-Hhc
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCG-AIM 337 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~-~~~ 337 (805)
.+.|+|.|.... ....++|..| |.|+...++......+...++|.++..+..+.+|||.|++.+++..+.+++. +++
T Consensus 139 ~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 139 VLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred HHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 999999877654 3455788888 7798888877776666667888888888777899999999988766655544 445
Q ss_pred cCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhcccccccccccccccccccc
Q psy10046 338 RDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKFSSVINIPTYI 417 (805)
Q Consensus 338 ~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (805)
+||++...++++...++
T Consensus 218 ~PP~~~~~~~~~~s~~~--------------------------------------------------------------- 234 (599)
T PF06609_consen 218 FPPPRAQLHGRKLSKRE--------------------------------------------------------------- 234 (599)
T ss_pred CCCchhhhccccCcHHH---------------------------------------------------------------
Confidence 56542211110000000
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCCCCCCCCCccc
Q psy10046 418 RNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSVESDGPHEPLV 497 (805)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (805)
T Consensus 235 -------------------------------------------------------------------------------- 234 (599)
T PF06609_consen 235 -------------------------------------------------------------------------------- 234 (599)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCccccccccccccccc
Q psy10046 498 SAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDFLHSKLGVRRD 577 (805)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (805)
.+.+.||+|.++... .....++++.
T Consensus 235 -------------------------------------------------~l~~lD~IG~~L~~~----Gl~LfLlgl~-- 259 (599)
T PF06609_consen 235 -------------------------------------------------QLKELDWIGIFLFIA----GLALFLLGLS-- 259 (599)
T ss_pred -------------------------------------------------HHHHhhHHHHHHHHH----HHHHHHHHHh--
Confidence 012334444432211 0000000000
Q ss_pred cccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHH-HHHhhhccccchh
Q psy10046 578 TNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDAR-ELIVGMFDFSMFL 656 (805)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 656 (805)
. ......-|++...++-+......+ +.. ...+.. ...+++++.++||
T Consensus 260 -----------w------------gG~~~~~W~Sa~VIa~lviG~~~L-v~F--------~~wE~~~~~~~Pl~P~~Lf~ 307 (599)
T PF06609_consen 260 -----------W------------GGYPYYPWKSAHVIAPLVIGFVLL-VAF--------VVWEWFGAPKDPLFPHRLFK 307 (599)
T ss_pred -----------c------------cCCCCCCCCCccchhhHHHHHHHH-HHH--------HHhhhhccCCCCcCCHHHhc
Confidence 0 000000000000000000000000 000 001111 1236789999999
Q ss_pred h-HHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCCh---hhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHH-HH
Q psy10046 657 E-LHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSK---EEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTY-AA 730 (805)
Q Consensus 657 ~-~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~---~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~-~~ 730 (805)
+ |.+...++..++....++....+.|..... ++-|+ ...+++..+.+++.++|.++.|++..+ +++.|+. ++
T Consensus 308 ~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~--ir~~Kw~li~ 385 (599)
T PF06609_consen 308 DRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSK--IRHIKWQLIF 385 (599)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHH--ccchhHHHHH
Confidence 8 567776677777777777777777877665 55554 356777888888999999999999987 5555544 34
Q ss_pred HHHHHHHHHhhhhh-hhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 731 CLIGCGVSTALMPL-FATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 731 ~~~~~~i~~l~~~~-~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
+.+++.+++-++.. ..++....+.+.++.|++.|.......++++-.+|++..|++.|+...++.+|+.+|..
T Consensus 386 ~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~a 459 (599)
T PF06609_consen 386 GSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYA 459 (599)
T ss_pred HHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHH
Confidence 44444332222221 23344555677888899888888788888888899999999999999999999988753
No 65
>KOG2532|consensus
Probab=99.92 E-value=9.4e-24 Score=239.32 Aligned_cols=147 Identities=19% Similarity=0.313 Sum_probs=134.8
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHH
Q psy10046 191 NEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRT--IEHMYLTFGLLAGIGLAL 268 (805)
Q Consensus 191 ~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~--~~~l~i~~R~l~G~g~g~ 268 (805)
.+++++..+-+++.+.+..|+.+++++.|+++||+|.|+++.++.++.++++++..++.+ ++.+ +++|+++|++.|.
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~-~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLL-LVLRFLQGLGQGV 144 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhh-HHHHHHhHHHHhH
Confidence 368889999999999999999999999999999999999999999999999999887643 3444 4579999999999
Q ss_pred HHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHHHHhcc
Q psy10046 269 SYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISE-YGWRGTVLLLSGTFFNLCVCGAIMR 338 (805)
Q Consensus 269 ~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~-~gWr~~f~i~~~~~~~~~i~~~~~~ 338 (805)
.+++...+.+.|.| +||++..++...+..+|.+++-+++|++.+. +||+++|++.++++++..++++++.
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999998 8999999999999999999999999999998 9999999999999998888876653
No 66
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.92 E-value=1.7e-23 Score=234.50 Aligned_cols=323 Identities=10% Similarity=0.022 Sum_probs=250.0
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHH----HHHHHHHHHHHHHHHhcCcHHHHH
Q psy10046 180 FSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMT----IVAGIISGVGFVLSCFSRTIEHMY 255 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vl----ii~~~l~~i~~i~~a~a~~~~~l~ 255 (805)
..+.+++|.+.+++|++..+++++.+++.++..++++++|+++||+||+... .++.+++.+ +.+.++++++.++
T Consensus 21 ~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~ 98 (382)
T TIGR00902 21 GIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLF 98 (382)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHH
Confidence 3455667889999999999999999999999999999999999999985433 222222222 2445678898886
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q psy10046 256 LTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGA 335 (805)
Q Consensus 256 i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~ 335 (805)
+ .|++.|++.+...+...++..++ .++|++++|....+..+|.+++|++++++.+++|||+.|++.+++.++. ++.+
T Consensus 99 ~-~~~l~~~~~~~~~p~~~al~~~~-~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~-~~~~ 175 (382)
T TIGR00902 99 I-AIGLFALFFSAGMPIGDALANTW-QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFM-LIGF 175 (382)
T ss_pred H-HHHHHHHHHccchhHHHHHHHHH-HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHH-HHHH
Confidence 6 58999988888777777776544 6778999999999999999999999999999999999998876543322 2222
Q ss_pred hccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhcccccccccccccccccc
Q psy10046 336 IMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKFSSVINIPT 415 (805)
Q Consensus 336 ~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (805)
+..+... +.++ +
T Consensus 176 ~~~~~~~---~~~~----~------------------------------------------------------------- 187 (382)
T TIGR00902 176 LIKPTIP---PKDA----I------------------------------------------------------------- 187 (382)
T ss_pred HcCCCCC---CCcc----c-------------------------------------------------------------
Confidence 2211100 0000 0
Q ss_pred ccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCCCCCCCCCc
Q psy10046 416 YIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSVESDGPHEP 495 (805)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (805)
+..+
T Consensus 188 -------------------------------------~~~~--------------------------------------- 191 (382)
T TIGR00902 188 -------------------------------------PEDE--------------------------------------- 191 (382)
T ss_pred -------------------------------------cccc---------------------------------------
Confidence 0000
Q ss_pred ccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCccccccccccccc
Q psy10046 496 LVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDFLHSKLGVR 575 (805)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (805)
...
T Consensus 192 --------------------------------------------~~~--------------------------------- 194 (382)
T TIGR00902 192 --------------------------------------------SQG--------------------------------- 194 (382)
T ss_pred --------------------------------------------ccc---------------------------------
Confidence 000
Q ss_pred cccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHHHhhhccccch
Q psy10046 576 RDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIVGMFDFSMF 655 (805)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 655 (805)
.+. ..+++
T Consensus 195 ----------------------------------------------------------------------~~~--~~~~l 202 (382)
T TIGR00902 195 ----------------------------------------------------------------------DSA--FIALL 202 (382)
T ss_pred ----------------------------------------------------------------------chh--HHHHH
Confidence 000 02567
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHH
Q psy10046 656 LELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGC 735 (805)
Q Consensus 656 ~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~ 735 (805)
|+|++|.+.+..++...+...+..+.|.|+++.|.+....+++.....++.+++.++.+++.|| ++.++++.++.+++
T Consensus 203 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r--~g~~~~l~~~~~~~ 280 (382)
T TIGR00902 203 KNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQN--CSARDLLLISAIAC 280 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhh--CCHHHHHHHHHHHH
Confidence 8899999988888888888888889999999999999999999998889999999999999999 99999999999999
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHH-HHHhhhhccCCCC
Q psy10046 736 GVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTL-LAQGIGNLVGPPL 804 (805)
Q Consensus 736 ~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~-~~~~ig~~igp~i 804 (805)
++..+++. ..++.+.+++..++.|++++..++....++.+. |+++++++.|+++ +..++|.++||.+
T Consensus 281 ~~~~~~~~-~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~ 348 (382)
T TIGR00902 281 VGRWAIIG-AIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAF 348 (382)
T ss_pred HHHHHHHH-hHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887776 467778888889999999999999988899987 9889999999987 4667788777754
No 67
>PRK10054 putative transporter; Provisional
Probab=99.92 E-value=6.9e-23 Score=230.61 Aligned_cols=153 Identities=14% Similarity=0.093 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q psy10046 182 FGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLL 261 (805)
Q Consensus 182 ~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l 261 (805)
...+.+++.+++|++..+++++.+++.+++.++.+++|+++||+|||++++++.++.+++.++.+++++++.+++ +|++
T Consensus 27 ~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 105 (395)
T PRK10054 27 LPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVL-FFAL 105 (395)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHH
Confidence 334445677889999999999999999999999999999999999999999999999999999999999888755 5888
Q ss_pred HHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHh
Q psy10046 262 AGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 262 ~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
.|.+.+...+...++..+..| ++|++++++......+|.+++|++++++.. .||++.|++.+++.++.+++.++
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 106 INCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHH
Confidence 888777777778888887776 679999999999999999999999999875 79999999887776665544443
No 68
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.92 E-value=2.5e-22 Score=225.96 Aligned_cols=143 Identities=17% Similarity=0.106 Sum_probs=123.9
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy10046 183 GLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLA 262 (805)
Q Consensus 183 ~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~ 262 (805)
....+.+.++++.+..+.+++.+.+.+++.++.+++|+++||+|||++++++.+++++++++++++.+. ++ .|+++
T Consensus 23 ~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~-~r~l~ 98 (393)
T PRK11195 23 LFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LL-AYGLV 98 (393)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HH-HHHHH
Confidence 333456688999999999999999999999999999999999999999999999999998887776654 34 59999
Q ss_pred HHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHH
Q psy10046 263 GIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 263 G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~ 330 (805)
|++.+...+...+++.+++| ++|++++++......+|.++||.++|++.+. .|+..+++.++..++.
T Consensus 99 G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 99 GIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 99999999999999999998 7799999999999999999999999999885 4777776665444333
No 69
>KOG2533|consensus
Probab=99.91 E-value=3.2e-23 Score=235.55 Aligned_cols=152 Identities=13% Similarity=0.167 Sum_probs=140.0
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Q psy10046 188 EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLA 267 (805)
Q Consensus 188 ~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g 267 (805)
.+.+|.+....+.+++.++|.++|+++.++++.|.||++..+.+....+++++..++.+...|++.+++ .|++.|+..+
T Consensus 71 g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ia-lr~llGl~es 149 (495)
T KOG2533|consen 71 GLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIA-LRFLLGLFES 149 (495)
T ss_pred CCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHHHHHHHhc
Confidence 355888999999999999999999999999999999999999999999999999999888999999955 7999999999
Q ss_pred HHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHh------hccchHHHHHHHHHHHHHHHHHHHhccCC
Q psy10046 268 LSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLI------SEYGWRGTVLLLSGTFFNLCVCGAIMRDP 340 (805)
Q Consensus 268 ~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~------~~~gWr~~f~i~~~~~~~~~i~~~~~~~p 340 (805)
+.+|....+++.|+. ++||..+|+|.+...+|.++|++++..+. ...||||.|++.|+++++..++.+++.|.
T Consensus 150 ~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 150 GGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred ccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecC
Confidence 999999999999997 77999999999999999999999999874 35799999999999999998888877664
No 70
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.91 E-value=1.1e-22 Score=226.41 Aligned_cols=151 Identities=20% Similarity=0.293 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHhC--CChhHHHHHHHH--HH---HHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHH
Q psy10046 180 FSFGLLYIEFLNEFG--ASKSKTAWIGSL--FM---AVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIE 252 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g--~s~~~~~l~~s~--~~---lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~ 252 (805)
+.++...+.+.+++. .+..+.+++.+. +. ++..++.+++|+++||+|||++++++.++++++.+++++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~ 89 (394)
T TIGR00883 10 YLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYA 89 (394)
T ss_pred HHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChh
Confidence 444555566666653 444555544433 33 33456899999999999999999999999999999999999875
Q ss_pred H-------HHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHh--------hccch
Q psy10046 253 H-------MYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLI--------SEYGW 316 (805)
Q Consensus 253 ~-------l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~--------~~~gW 316 (805)
. +++..|+++|++.+...+....++.++++ ++|++++++...+..+|.+++++++..+. ..+||
T Consensus 90 ~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w 169 (394)
T TIGR00883 90 TIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGW 169 (394)
T ss_pred hhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccch
Confidence 3 23447999999999989999999999987 78999999999999999999998887654 35789
Q ss_pred HHHHHHHHHHHHHH
Q psy10046 317 RGTVLLLSGTFFNL 330 (805)
Q Consensus 317 r~~f~i~~~~~~~~ 330 (805)
|+.|++.+++.++.
T Consensus 170 ~~~~~~~~~~~~~~ 183 (394)
T TIGR00883 170 RIPFLVSAVLVLIG 183 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 99998876655443
No 71
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.91 E-value=7.2e-22 Score=218.71 Aligned_cols=152 Identities=11% Similarity=0.035 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-----CChHH-HHHHHHHHHHHHHHHHhc---CcHH
Q psy10046 182 FGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKF-----GCRSM-TIVAGIISGVGFVLSCFS---RTIE 252 (805)
Q Consensus 182 ~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~-----Grr~v-lii~~~l~~i~~i~~a~a---~~~~ 252 (805)
.+...|.+.+++|+|.+++++..++ .+.+++ .+++|+++||+ |||+. ++++.++.++..++.++. .+++
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~ 84 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLP 84 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHH
Confidence 4556789999999999999999755 555555 89999999998 89886 566777777777777776 3444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc--------hHHHHHHH
Q psy10046 253 HMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG--------WRGTVLLL 323 (805)
Q Consensus 253 ~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g--------Wr~~f~i~ 323 (805)
.+++ ..++.|++.+...++..+++.+++| ++|+++.++...+..+|.++++.+++.+....| ||+.|++.
T Consensus 85 ~l~~-~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ 163 (356)
T TIGR00901 85 LLAG-LAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWT 163 (356)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHH
Confidence 4544 4677788888888888999999996 789999999999999999999999999998888 99999988
Q ss_pred HHHHHHHHHHHHh
Q psy10046 324 SGTFFNLCVCGAI 336 (805)
Q Consensus 324 ~~~~~~~~i~~~~ 336 (805)
+++.++..+..++
T Consensus 164 ai~~l~~~~~~~~ 176 (356)
T TIGR00901 164 ALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHHHHH
Confidence 8766665544443
No 72
>KOG1330|consensus
Probab=99.91 E-value=5.3e-24 Score=230.84 Aligned_cols=178 Identities=16% Similarity=0.116 Sum_probs=163.8
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISG 239 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~ 239 (805)
+.++.+++.+++..+.+...+...-.++.+.+.||+++...|++.+.+.+.++++.|++|+|+||+.|++++.+|.++|+
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~ 109 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWT 109 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHH
Confidence 44677777788888888877888778899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc-hH
Q psy10046 240 VGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG-WR 317 (805)
Q Consensus 240 i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g-Wr 317 (805)
++.++++++..+|++.+ +|.+.|+|.+.+.+..+.++++.|| .+|++++++++.+..+|..+|-+++..+.+..+ ||
T Consensus 110 ~Av~~~~fs~~Fwq~~l-~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr 188 (493)
T KOG1330|consen 110 LAVFASGFSNHFWQVLL-CRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWR 188 (493)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceE
Confidence 99999999999999866 7999999999999999999999998 679999999999999999999999998888776 99
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q psy10046 318 GTVLLLSGTFFNLCVCGAIMR 338 (805)
Q Consensus 318 ~~f~i~~~~~~~~~i~~~~~~ 338 (805)
|.|++.+++++++.++.+++.
T Consensus 189 ~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 189 WAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred EEEEeehHHHHHHHHHHHhhc
Confidence 999999999998888877654
No 73
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.91 E-value=2.7e-22 Score=224.64 Aligned_cols=323 Identities=11% Similarity=0.013 Sum_probs=237.3
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCh----HHHHHHHHHHHHHHHHHHhcCcHHHHH
Q psy10046 180 FSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCR----SMTIVAGIISGVGFVLSCFSRTIEHMY 255 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr----~vlii~~~l~~i~~i~~a~a~~~~~l~ 255 (805)
..+.+++|.+.+++|.|..++|++.+++.++..++++++|+++||+||+ +.+.+..++. ....+...++++.++
T Consensus 21 g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~ 98 (382)
T PRK11128 21 GVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLF 98 (382)
T ss_pred HHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHH
Confidence 3455566788899999999999999999999999999999999999984 3333222222 223344568888886
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q psy10046 256 LTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGA 335 (805)
Q Consensus 256 i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~ 335 (805)
+ .|++.|++.+...+...+++.++ .++|+++++....+..+|.++||++++++.+++|||..|++.++..++.+++.
T Consensus 99 i-~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~- 175 (382)
T PRK11128 99 V-AIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQ- 175 (382)
T ss_pred H-HHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-
Confidence 6 69999999888778777666665 56688888888888899999999999999999999999998775444333322
Q ss_pred hccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhcccccccccccccccccc
Q psy10046 336 IMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKFSSVINIPT 415 (805)
Q Consensus 336 ~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (805)
+..+.. .+++ +
T Consensus 176 ~~~~~~------~~~~--~------------------------------------------------------------- 186 (382)
T PRK11128 176 LLRPTI------MPQG--E------------------------------------------------------------- 186 (382)
T ss_pred HccCCC------CCcc--c-------------------------------------------------------------
Confidence 221110 0000 0
Q ss_pred ccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCCCCCCCCCc
Q psy10046 416 YIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSVESDGPHEP 495 (805)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (805)
+++ + .
T Consensus 187 ----~~~------------------~--------------~--------------------------------------- 191 (382)
T PRK11128 187 ----SRQ------------------Q--------------E--------------------------------------- 191 (382)
T ss_pred ----ccc------------------c--------------c---------------------------------------
Confidence 000 0 0
Q ss_pred ccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCccccccccccccc
Q psy10046 496 LVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDFLHSKLGVR 575 (805)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (805)
. +.
T Consensus 192 -------------------------------------------~-----~~----------------------------- 194 (382)
T PRK11128 192 -------------------------------------------S-----AG----------------------------- 194 (382)
T ss_pred -------------------------------------------c-----cc-----------------------------
Confidence 0 00
Q ss_pred cccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHHHhhhccccch
Q psy10046 576 RDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIVGMFDFSMF 655 (805)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 655 (805)
.+.. .+++
T Consensus 195 ----------------------------------------------------------------------~~~~--~~i~ 202 (382)
T PRK11128 195 ----------------------------------------------------------------------WPAW--KALL 202 (382)
T ss_pred ----------------------------------------------------------------------cchH--HHHH
Confidence 0000 2457
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHH
Q psy10046 656 LELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGC 735 (805)
Q Consensus 656 ~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~ 735 (805)
|++.+|.+++..++..........++|.|+++.|++....+++.+...++.+++.++.|++.|| +++++.+.++.++.
T Consensus 203 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r--~~~~~~l~~~~~~~ 280 (382)
T PRK11128 203 KEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRR--WSARDLLLLSAICG 280 (382)
T ss_pred cChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHH
Confidence 8888888887777776777677788899988899999999998888889999999999999999 99999988888888
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHH-HHHhhhhccCCCC
Q psy10046 736 GVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTL-LAQGIGNLVGPPL 804 (805)
Q Consensus 736 ~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~-~~~~ig~~igp~i 804 (805)
++..+++. ..++.+.+++..++.|++.+...+....++.+. +++++++..|+++ ...++|..+||.+
T Consensus 281 ~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i 348 (382)
T PRK11128 281 VVRWGLMG-STTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVL 348 (382)
T ss_pred HHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776665 456777778888889998888777777777776 5566688888886 4445665666643
No 74
>KOG0569|consensus
Probab=99.91 E-value=2.4e-21 Score=217.45 Aligned_cols=341 Identities=17% Similarity=0.181 Sum_probs=252.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10046 200 TAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCF---SRTIEHMYLTFGLLAGIGLALSYVTAVVS 276 (805)
Q Consensus 200 ~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~---a~~~~~l~i~~R~l~G~g~g~~~~~~~~~ 276 (805)
.+.+++++.+|.++|+++.++++|++|||..++++.++..++.++..+ .+++.++++ .|++.|+..|........+
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~-GR~i~Gl~~gl~~~~~pmy 140 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLIL-GRLIVGLACGLSTGLVPMY 140 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHHhHHHHHHHHHH
Confidence 467899999999999999999999999999999998888887777655 466777755 6999999999999999999
Q ss_pred Hhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHH-HHh-hccchHHHHHHHHHHHHHHHHHH-HhccCCchhhh-hhchHH
Q psy10046 277 IAFWFE-KKRGLACSLGSTGTGFGTTVYAPITS-YLI-SEYGWRGTVLLLSGTFFNLCVCG-AIMRDPEWWTL-EQNKEK 351 (805)
Q Consensus 277 l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~-~l~-~~~gWr~~f~i~~~~~~~~~i~~-~~~~~p~~~~~-~~~~~~ 351 (805)
+.|..| +.||..-.+...+..+|..++..++. .+. +...|++.+.+.++.+++.+++. ++.++|+|+.. +++.++
T Consensus 141 l~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 141 LTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEE 220 (485)
T ss_pred HhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHH
Confidence 999999 55999999999999999999977763 233 45569999998888776665555 45678999987 788899
Q ss_pred HHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhccccccccccccccccccccccccccccCCCCCC
Q psy10046 352 DLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKFSSVINIPTYIRNNEKQDVHKSSDP 431 (805)
Q Consensus 352 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (805)
+.++++.-++....+ ...|+..+..+.....
T Consensus 221 A~~sl~~y~G~~~~~-------~~~e~~~~e~~~~~~~------------------------------------------ 251 (485)
T KOG0569|consen 221 ARKALKFYRGKEDVE-------AEIEEMLREIEEEELE------------------------------------------ 251 (485)
T ss_pred HHHHHHHHhCCCcch-------hHHHHHHHHHHHhccc------------------------------------------
Confidence 999888744322110 1111111000000000
Q ss_pred CCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCCCCCCCCCcccccCCCCCcccccCC
Q psy10046 432 FTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSVESDGPHEPLVSAGKGNDSNRCKSM 511 (805)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (805)
.+++
T Consensus 252 -------------------------------------------------~~~~--------------------------- 255 (485)
T KOG0569|consen 252 -------------------------------------------------KKKQ--------------------------- 255 (485)
T ss_pred -------------------------------------------------cccC---------------------------
Confidence 0000
Q ss_pred CCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCccccccccccccccccccccccCCCcccc
Q psy10046 512 SPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDFLHSKLGVRRDTNLGLLVLPGRILD 591 (805)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (805)
.
T Consensus 256 -----------------------------~-------------------------------------------------- 256 (485)
T KOG0569|consen 256 -----------------------------I-------------------------------------------------- 256 (485)
T ss_pred -----------------------------C--------------------------------------------------
Confidence 0
Q ss_pred cCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHHHhhhccccchhhHHHHHHHHHHHHHH
Q psy10046 592 HHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIVGMFDFSMFLELHFLLVSISTILLF 671 (805)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~ 671 (805)
.+..++..+-+|.+.+..+.+.....+
T Consensus 257 -----------------------------------------------------sl~~~~~~~~lR~~~~i~~~v~~~qq~ 283 (485)
T KOG0569|consen 257 -----------------------------------------------------SLRQLLKNPTLRRPLLIGIVVSFAQQF 283 (485)
T ss_pred -----------------------------------------------------cHHHHhcCcchhHHHHHHHHHHHHHHh
Confidence 011111123356666677777777788
Q ss_pred HhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhh---hh
Q psy10046 672 TWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFA---TN 748 (805)
Q Consensus 672 ~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~---~~ 748 (805)
.+.....+|...++++.|++..++.+.....++..++.++++.+++|| +|||.++..+..++.++.+++.... ..
T Consensus 284 sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~--~gRRpLll~~~~~~~~~~~~~~~~~~l~~~ 361 (485)
T KOG0569|consen 284 SGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR--LGRRPLLLISLSLMAVALLLMSIALFLSNS 361 (485)
T ss_pred cCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999999999999999999999999999999 9999999999998888777664321 11
Q ss_pred H--H---HHHHHHHHHhhhhhhh-chhhhhhhhhccCccchhhhhHHHHHHHhhhhcc
Q psy10046 749 Y--W---ALLFTCLSFGIFFASN-FSCTPIILVELVPLDRFATAYGLTLLAQGIGNLV 800 (805)
Q Consensus 749 ~--~---~~~~~~~l~G~~~g~~-~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~i 800 (805)
. | ..+++.+++.++++.. -|+.+-+.+|++|+..|+.+.++..++..+++++
T Consensus 362 ~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fi 419 (485)
T KOG0569|consen 362 FGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFI 419 (485)
T ss_pred hhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHH
Confidence 1 1 2234444554444433 4567789999999999999999999988887764
No 75
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.90 E-value=1.5e-21 Score=219.52 Aligned_cols=151 Identities=13% Similarity=0.050 Sum_probs=113.2
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHH-HHHHHHHHHHHHHhhhCChHHH-HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy10046 185 LYIEFLNEFGASKSKTAWIGSLFMA-VPLLLGPVASAFVEKFGCRSMT-IVAGIISGVGFVLSCFSRTIEHMYLTFGLLA 262 (805)
Q Consensus 185 ~~p~i~~~~g~s~~~~~l~~s~~~l-g~~ig~l~~G~LsDr~Grr~vl-ii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~ 262 (805)
+.+++.+++|++.++++++.+.+.+ ++.++++++++ +||+|||+.+ +.+.++.+++.++.+++++++.+++. +++.
T Consensus 38 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 115 (393)
T PRK15011 38 LSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFV-GVFL 115 (393)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHH-HHHH
Confidence 3345678999999999999876655 66666655555 9999998864 55566667778888899999887664 4444
Q ss_pred HHHHHHHHHHHHHHHhhhcc-cch--hHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 263 GIGLALSYVTAVVSIAFWFE-KKR--GLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 263 G~g~g~~~~~~~~~l~~~~p-~~r--g~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
|...+...+....++.++.+ +.| +...++...+..+|.++||++++++.+++|||+.|++.+++.++..++.++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 193 (393)
T PRK15011 116 SSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLF 193 (393)
T ss_pred HHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhh
Confidence 44445566777677777665 334 3455788889999999999999999999999999999887777666655544
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.90 E-value=6.8e-22 Score=251.86 Aligned_cols=330 Identities=14% Similarity=0.056 Sum_probs=238.9
Q ss_pred HHHHHHHHHHhCCCh--hHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH---HHhcCcHHHHHHH
Q psy10046 183 GLLYIEFLNEFGASK--SKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVL---SCFSRTIEHMYLT 257 (805)
Q Consensus 183 ~~~~p~i~~~~g~s~--~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~---~a~a~~~~~l~i~ 257 (805)
..+.+.+..+++.+. ...+++.+++.++++++++++|+++||+|||++++++.++.+++.++ +.++.+++.+++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 108 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFA- 108 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH-
Confidence 334455666777653 44789999999999999999999999999999999988766655544 344578888866
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhc--------c-chHHHHHHHHHHH
Q psy10046 258 FGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISE--------Y-GWRGTVLLLSGTF 327 (805)
Q Consensus 258 ~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~--------~-gWr~~f~i~~~~~ 327 (805)
+|++.|++.+...++..+++.+++| ++|++++++..++..+|.++|+++++++... + +|+|.+.+.+++.
T Consensus 109 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (1146)
T PRK08633 109 VTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAV 188 (1146)
T ss_pred HHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHH
Confidence 6999999999999999999999987 7799999999999999999999999999876 2 3455544444333
Q ss_pred HHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhcccccccccc
Q psy10046 328 FNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKF 407 (805)
Q Consensus 328 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (805)
+++.++..+..+.... ....
T Consensus 189 ~~~~~~~~~~~~~~~~-~~~~----------------------------------------------------------- 208 (1146)
T PRK08633 189 AVLGLIFAYRLPKVPA-AAPE----------------------------------------------------------- 208 (1146)
T ss_pred HHHHHHHHhcCcCCCC-CCcc-----------------------------------------------------------
Confidence 3333222222211000 0000
Q ss_pred ccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCC
Q psy10046 408 SSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSV 487 (805)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (805)
+. +. .
T Consensus 209 --------------~~-------------------------------~~---------------------------~--- 213 (1146)
T PRK08633 209 --------------VF-------------------------------DK---------------------------K--- 213 (1146)
T ss_pred --------------cc-------------------------------cc---------------------------c---
Confidence 00 00 0
Q ss_pred CCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCccccc
Q psy10046 488 ESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDF 567 (805)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (805)
....
T Consensus 214 ---------------------------------------------------~~~~------------------------- 217 (1146)
T PRK08633 214 ---------------------------------------------------KYLF------------------------- 217 (1146)
T ss_pred ---------------------------------------------------cccc-------------------------
Confidence 0000
Q ss_pred cccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHHHh
Q psy10046 568 LHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIV 647 (805)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (805)
....+..+
T Consensus 218 -----------------------------------------------------------------------~~~~~~~~- 225 (1146)
T PRK08633 218 -----------------------------------------------------------------------PKLLWRNL- 225 (1146)
T ss_pred -----------------------------------------------------------------------HHHHHHHH-
Confidence 00000000
Q ss_pred hhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChh-hHHHHHHHHHHHHHhhhheeeeecCCCCccch
Q psy10046 648 GMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKE-EATSILSYIGVTNTVGMVALGWACDQPWLNVK 725 (805)
Q Consensus 648 ~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~-~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~ 725 (805)
..+++++.++.+++..++.+........++|.|+.+ .|++.. .++++.+..+++.+++.+++|++.|| ++++
T Consensus 226 ----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r--~~~~ 299 (1146)
T PRK08633 226 ----KLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGR--HIEL 299 (1146)
T ss_pred ----HHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC--ceEc
Confidence 124566777766666666555556666778888775 799988 89999999999999999999999999 8888
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 726 KTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 726 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
+++.++.++.+++++++. ...+.+.++++.+++|++.+...+...+++.+.+|.+.+|+++|+.+++..+|+++++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~ 376 (1146)
T PRK08633 300 GLVPLGALGLALSLFLLP-TAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLA 376 (1146)
T ss_pred cchhHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHH
Confidence 887777777777666655 34466667777888899999888888999999999999999999999999888866543
No 77
>KOG0255|consensus
Probab=99.89 E-value=2.6e-22 Score=234.17 Aligned_cols=165 Identities=19% Similarity=0.196 Sum_probs=149.2
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Q psy10046 190 LNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALS 269 (805)
Q Consensus 190 ~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~ 269 (805)
.+.+..+.....+..+++++|.++|++++|+++|++|||+++++++++..++.+++++++|++.+++ +|++.|++.++.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~-~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLI-FRFLSGFFGSGP 188 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHH-HHHHHHhhccch
Confidence 3556678889999999999999999999999999999999999999999999999999999999966 799999999999
Q ss_pred HHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc-cCCchhhhhh
Q psy10046 270 YVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM-RDPEWWTLEQ 347 (805)
Q Consensus 270 ~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~-~~p~~~~~~~ 347 (805)
...+..++.|+.+ ++|+.++.+ ..+...|+.+++++++++.. +|||.+|+..+..++.+++.++. +.|+|+..++
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g 265 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKG 265 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcC
Confidence 9999999998885 889999999 88888888899999999887 89999999999888877776665 7899999999
Q ss_pred chHHHHHhhhc
Q psy10046 348 NKEKDLKSIKG 358 (805)
Q Consensus 348 ~~~~~~~~l~~ 358 (805)
+.+++.+.+++
T Consensus 266 ~~~~a~~~l~~ 276 (521)
T KOG0255|consen 266 RIDEAIKILKK 276 (521)
T ss_pred chHHHHHHHHH
Confidence 99888876654
No 78
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.89 E-value=1.2e-21 Score=249.42 Aligned_cols=314 Identities=11% Similarity=0.016 Sum_probs=228.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHH---HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10046 198 SKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIV---AGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAV 274 (805)
Q Consensus 198 ~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii---~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~ 274 (805)
...++..+++.++++++.+++|+++||+|||+++.+ ..+++++..+++.+..+++++++ +|+++|++.+...++..
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~-~~~l~gi~~a~~~p~~~ 130 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFA-ALFLMGIHSALFGPIKY 130 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHHHHHHhhchHHH
Confidence 457888999999999999999999999999997533 22333333333444588988866 69999999999999999
Q ss_pred HHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhccCCchhhhhhchHHHH
Q psy10046 275 VSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDL 353 (805)
Q Consensus 275 ~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~ 353 (805)
+++.++++ ++|++++|+..++..+|.++||+++|++....||++.|++.+++.++.+++.+++.++... ...
T Consensus 131 a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------ 203 (1140)
T PRK06814 131 SILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA-APD------ 203 (1140)
T ss_pred HhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC-CCC------
Confidence 99998887 7799999999999999999999999999999999999955444444444333333111000 000
Q ss_pred HhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhccccccccccccccccccccccccccccCCCCCCCC
Q psy10046 354 KSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKFSSVINIPTYIRNNEKQDVHKSSDPFT 433 (805)
Q Consensus 354 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (805)
T Consensus 204 -------------------------------------------------------------------------------- 203 (1140)
T PRK06814 204 -------------------------------------------------------------------------------- 203 (1140)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCCCCCCCCCcccccCCCCCcccccCCCC
Q psy10046 434 TPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSP 513 (805)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (805)
. ..
T Consensus 204 --------~------------~~--------------------------------------------------------- 206 (1140)
T PRK06814 204 --------L------------KI--------------------------------------------------------- 206 (1140)
T ss_pred --------C------------ee---------------------------------------------------------
Confidence 0 00
Q ss_pred CCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCccccccccccccccccccccccCCCcccccC
Q psy10046 514 PGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHH 593 (805)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (805)
...
T Consensus 207 -------------------------~~~---------------------------------------------------- 209 (1140)
T PRK06814 207 -------------------------DRN---------------------------------------------------- 209 (1140)
T ss_pred -------------------------ccc----------------------------------------------------
Confidence 000
Q ss_pred ccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHh
Q psy10046 594 LRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIVGMFDFSMFLELHFLLVSISTILLFTW 673 (805)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~ 673 (805)
...+....+ ..+.+++.++.+++..++.++.
T Consensus 210 --------------------------------------------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 240 (1140)
T PRK06814 210 --------------------------------------------IIRSTITLL-----KYAKADKRIWLAILGISWFWLV 240 (1140)
T ss_pred --------------------------------------------hHHHHHHHH-----HHHhcCchHHHHHHHHHHHHHH
Confidence 000000000 1345677788888877777766
Q ss_pred hhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhh-------
Q psy10046 674 FVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLF------- 745 (805)
Q Consensus 674 ~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~------- 745 (805)
+..+..++|.|+++ .|.++..++++.+.++++.++|.++.|+++++ ..+++.+.++.++.+++.+.+.+.
T Consensus 241 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 318 (1140)
T PRK06814 241 GAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEG--RITLLYVPIGALLMGLFGLDLAFASSSVPAE 318 (1140)
T ss_pred HHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC--ceeeeeehHHHHHHHHHHHHHHhcccccccc
Confidence 67777789999986 69999999999999999999999999999987 554444444444443333322211
Q ss_pred ------------hhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 746 ------------ATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 746 ------------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
..+.+.+++..+++|++.+...+...+++.+.+|++.+|.++|+.+++..+|..+|+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~ 389 (1140)
T PRK06814 319 PAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTII 389 (1140)
T ss_pred cccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHH
Confidence 14556667778888999998888899999999999999999999999999988887653
No 79
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.89 E-value=3.8e-21 Score=222.41 Aligned_cols=153 Identities=11% Similarity=0.154 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-----CChHH-HHHHHHHHHHHHHHHHhc---CcH
Q psy10046 181 SFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKF-----GCRSM-TIVAGIISGVGFVLSCFS---RTI 251 (805)
Q Consensus 181 ~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~-----Grr~v-lii~~~l~~i~~i~~a~a---~~~ 251 (805)
..+..+|.+.++.|.+..+++.+ +...+.+ ++.+++|+++||+ |||+. ++++.++.+++.+++++. .++
T Consensus 30 ~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l 107 (491)
T PRK11010 30 LTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQL 107 (491)
T ss_pred HHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchH
Confidence 44555688899999999999986 4444444 5899999999999 99885 667777777777777775 466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhh-ccchHHHHHHHHHHHHH
Q psy10046 252 EHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLIS-EYGWRGTVLLLSGTFFN 329 (805)
Q Consensus 252 ~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~-~~gWr~~f~i~~~~~~~ 329 (805)
+.+++ .+++.|++.+...+...+++.+++| ++|+++.++...+..+|.++++.+++++.+ ..|||+.|++.+++.++
T Consensus 108 ~~l~~-~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll 186 (491)
T PRK11010 108 RWLAA-LAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIP 186 (491)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHH
Confidence 67755 5899999999888899999999997 789999999999999999999999999998 57999999998877666
Q ss_pred HHHHHHh
Q psy10046 330 LCVCGAI 336 (805)
Q Consensus 330 ~~i~~~~ 336 (805)
..+..++
T Consensus 187 ~~l~~~~ 193 (491)
T PRK11010 187 CIIATLL 193 (491)
T ss_pred HHHHHHh
Confidence 6555444
No 80
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.88 E-value=1.6e-20 Score=198.29 Aligned_cols=340 Identities=19% Similarity=0.177 Sum_probs=266.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHH
Q psy10046 162 WMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVG 241 (805)
Q Consensus 162 w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~ 241 (805)
|+.+..+.++.+-.=-...+.+++++.+.+++|+|.+.+|+++++..+++++.+++..++..|+|..+.+.+++++.+++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 55555555554433334467889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc-chHHHH
Q psy10046 242 FVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEY-GWRGTV 320 (805)
Q Consensus 242 ~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~-gWr~~f 320 (805)
.++-... +...++.+ -++.|+|.+...+..+.++-+.|||+-+..+|+|.....+|.++++.+.-.+.++. |||+.+
T Consensus 91 ~~iR~~~-~~~~L~~g-t~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL 168 (395)
T COG2807 91 ILIRSLG-GLPLLFLG-TLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGAL 168 (395)
T ss_pred HHHHhcc-cHHHHHHH-HHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHH
Confidence 9998887 55566564 68999999999999999999999999999999999999999999999998888887 799999
Q ss_pred HHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhccc
Q psy10046 321 LLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATEL 400 (805)
Q Consensus 321 ~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (805)
.+.++.+++.+++++-.. .+ .+....
T Consensus 169 ~~WAl~allAl~~WlPq~-~r-----~~~~~~------------------------------------------------ 194 (395)
T COG2807 169 GFWALLALLALLIWLPQA-LR-----EQAASI------------------------------------------------ 194 (395)
T ss_pred HHHHHHHHHHHHHHhhhc-cc-----cccccc------------------------------------------------
Confidence 998888877766554321 10 000000
Q ss_pred cccccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCc
Q psy10046 401 NAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKP 480 (805)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (805)
+
T Consensus 195 -----------------------------------------~-------------------------------------- 195 (395)
T COG2807 195 -----------------------------------------A-------------------------------------- 195 (395)
T ss_pred -----------------------------------------c--------------------------------------
Confidence 0
Q ss_pred ccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcC
Q psy10046 481 LVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNG 560 (805)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (805)
. +
T Consensus 196 ---~--------------------------------------------------------------~------------- 197 (395)
T COG2807 196 ---T--------------------------------------------------------------K------------- 197 (395)
T ss_pred ---c--------------------------------------------------------------c-------------
Confidence 0 0
Q ss_pred CCccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchh
Q psy10046 561 GHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMD 640 (805)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (805)
T Consensus 198 -------------------------------------------------------------------------------- 197 (395)
T COG2807 198 -------------------------------------------------------------------------------- 197 (395)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCC
Q psy10046 641 DARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQP 720 (805)
Q Consensus 641 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~ 720 (805)
..-..+++|+|.-|.+.+..-++...+++...|+|.++.++|+|+.+++.+++...+.+++..++..++.+|.
T Consensus 198 -------~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~ 270 (395)
T COG2807 198 -------LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRS 270 (395)
T ss_pred -------cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000146788888999888889999999999999999999999999999999999999999999999999972
Q ss_pred CccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccC-ccchhhhhHHHHHHHhhhhc
Q psy10046 721 WLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVP-LDRFATAYGLTLLAQGIGNL 799 (805)
Q Consensus 721 ~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~~~~a~gl~~~~~~ig~~ 799 (805)
.++|...+...+++.++.+.+.+...+.. +.+++++|++.|..|++....+..... ++..+.-.|+...++.+=+.
T Consensus 271 -~n~r~~~~~~~~~~l~G~~G~~~~P~~~~--~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa 347 (395)
T COG2807 271 -KNQRPLVVLALLLMLVGLVGLLLAPGQLP--ILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAA 347 (395)
T ss_pred -cccchHHHHHHHHHHHHHHHHHHhhhhHH--HHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHh
Confidence 46666666666666665555542222222 223688999999999988877776654 55656666666666666666
Q ss_pred cCCCC
Q psy10046 800 VGPPL 804 (805)
Q Consensus 800 igp~i 804 (805)
+||.+
T Consensus 348 ~GP~l 352 (395)
T COG2807 348 FGPWL 352 (395)
T ss_pred hhhhh
Confidence 77764
No 81
>KOG0254|consensus
Probab=99.88 E-value=1.3e-20 Score=219.20 Aligned_cols=159 Identities=19% Similarity=0.207 Sum_probs=138.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10046 198 SKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSI 277 (805)
Q Consensus 198 ~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l 277 (805)
.+.+|+.+++.++.+++.+++|+++|++|||+.++++.+++.++.+++++++|+.++++ .|++.|+|.|........++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~-GR~l~G~g~G~~~~~~piy~ 167 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIV-GRILTGLGVGGASVLAPVYI 167 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHHhccchhhhhhcchhhH
Confidence 35589999999999999999999999999999999999999999999999999999977 59999999999999999999
Q ss_pred hhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhc--cchHHHHHHHHHHHHHHHHHHHh-ccCCchhhhhhchHHHH
Q psy10046 278 AFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISE--YGWRGTVLLLSGTFFNLCVCGAI-MRDPEWWTLEQNKEKDL 353 (805)
Q Consensus 278 ~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~--~gWr~~f~i~~~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~ 353 (805)
+|..| +.||...++...+..+|..++..+ +...++ .+||..+++..+.+++..+..++ .+.|+|+..+++.+++.
T Consensus 168 sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~-~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~ 246 (513)
T KOG0254|consen 168 SEIAPAHIRGTLVSLYQLFITIGILLGYCI-NYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAK 246 (513)
T ss_pred hhcCChhhhHHHHHHHHHHHHHHHHHHHHH-hhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHH
Confidence 99998 579999999999999999888444 444443 48999988888877777666333 36788999989988888
Q ss_pred Hhhhc
Q psy10046 354 KSIKG 358 (805)
Q Consensus 354 ~~l~~ 358 (805)
+.++.
T Consensus 247 ~~l~~ 251 (513)
T KOG0254|consen 247 RSLKR 251 (513)
T ss_pred HHHHH
Confidence 87765
No 82
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.7e-20 Score=201.06 Aligned_cols=335 Identities=16% Similarity=0.156 Sum_probs=262.7
Q ss_pred HHHHHHhHHHH-HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH-
Q psy10046 169 FFINMAGDGIA-FSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSC- 246 (805)
Q Consensus 169 ~~~~~~~~~~~-~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a- 246 (805)
+.+.|+.++.. ....+++|.+++.|+++..+++++...++.||.+++++.|.+.+|+|+|..+++++.++++++++..
T Consensus 18 ~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~p 97 (422)
T COG0738 18 LTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWP 97 (422)
T ss_pred HHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh
Confidence 34444556665 4468889999999999999999999999999999999999999999999999999999999999874
Q ss_pred --hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhc----------
Q psy10046 247 --FSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISE---------- 313 (805)
Q Consensus 247 --~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~---------- 313 (805)
...++..++. .-|+.|.|.+...+++..+++...+ ++-...+++.+.+.++|.+++|++++.++.+
T Consensus 98 Aa~~~~y~~FL~-~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~ 176 (422)
T COG0738 98 AASSKSYGFFLV-ALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQ 176 (422)
T ss_pred hhhhhhHHHHHH-HHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHH
Confidence 5567777755 4699999999999999999998876 5678889999999999999999999988762
Q ss_pred ---------cchHHHHHHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHh
Q psy10046 314 ---------YGWRGTVLLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLE 384 (805)
Q Consensus 314 ---------~gWr~~f~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (805)
..|+++|...+.+.+++.+.....+.|....
T Consensus 177 ~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~---------------------------------------- 216 (422)
T COG0738 177 ILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV---------------------------------------- 216 (422)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc----------------------------------------
Confidence 2478888888877777776666655441000
Q ss_pred cCCCccchhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhc
Q psy10046 385 SGVTPDFIETSVATELNAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQK 464 (805)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (805)
. .|+ ..+
T Consensus 217 --------------------------------------~----------------~~~-----------~~~-------- 223 (422)
T COG0738 217 --------------------------------------A----------------APS-----------LGA-------- 223 (422)
T ss_pred --------------------------------------c----------------ccc-----------ccc--------
Confidence 0 000 000
Q ss_pred hhhhccccCCCCCCCcccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccc
Q psy10046 465 TLSAEADRASEPRGKPLVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLK 544 (805)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (805)
.
T Consensus 224 --------------------------------------------------------------------------~----- 224 (422)
T COG0738 224 --------------------------------------------------------------------------S----- 224 (422)
T ss_pred --------------------------------------------------------------------------c-----
Confidence 0
Q ss_pred cccccccchhhhhhcCCCccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheecc
Q psy10046 545 HLKVHRYLWVQILVNGGHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISG 624 (805)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (805)
T Consensus 225 -------------------------------------------------------------------------------- 224 (422)
T COG0738 225 -------------------------------------------------------------------------------- 224 (422)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccCccchhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHH
Q psy10046 625 ILIAVIPFTENTSWMDDARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIG 703 (805)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~ 703 (805)
+.....+++++|+++...+..|++...-.....|++.|+.+ .|.+..++.+.++.++
T Consensus 225 ----------------------~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~ 282 (422)
T COG0738 225 ----------------------GSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFW 282 (422)
T ss_pred ----------------------ccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHH
Confidence 00001367889999999999999999999999999999998 8999999999999999
Q ss_pred HHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccch
Q psy10046 704 VTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRF 783 (805)
Q Consensus 704 i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~ 783 (805)
++.++||+++.++..| ++..+.+.+..++..+.++... ..++. ..+...++.|++.+..||.......+..| ++
T Consensus 283 ~~~~vGRFig~~lm~~--~~~~k~Laf~a~~~ill~~~~~-l~~g~-v~~~~l~~ig~F~simfPTIfslal~~l~-~~- 356 (422)
T COG0738 283 VGFMVGRFIGSALMSR--IKPEKYLAFYALIAILLLLAVA-LIGGV-VALYALFLIGLFNSIMFPTIFSLALKNLG-EH- 356 (422)
T ss_pred HHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHH-HhcCh-HHHHHHHHHHHHhHHHHHHHHHHHHhccC-cc-
Confidence 9999999999999998 9988888887776666665555 34443 34556677899999999999999999998 33
Q ss_pred hhhhHHHHHHHhhhhccCCCC
Q psy10046 784 ATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 784 ~~a~gl~~~~~~ig~~igp~i 804 (805)
....|.......+|+++.|++
T Consensus 357 ts~~s~~l~maivGGAiiP~l 377 (422)
T COG0738 357 TSVGSGLLVMAIVGGAIIPPL 377 (422)
T ss_pred ccccceeeeeheecchHHHHH
Confidence 333344444455666666653
No 83
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.87 E-value=1.7e-20 Score=212.77 Aligned_cols=149 Identities=17% Similarity=0.266 Sum_probs=115.9
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCCh--------hhHHHHHHHHHHHHHhhhheeeeecCCCCccch
Q psy10046 654 MFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSK--------EEATSILSYIGVTNTVGMVALGWACDQPWLNVK 725 (805)
Q Consensus 654 ~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~--------~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~ 725 (805)
++|++.++.+.+..++..........+++.++++.|.++ ...+++.+...+..+++.++.|+++|| +++|
T Consensus 204 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr--~g~r 281 (418)
T TIGR00889 204 LFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR--FGIK 281 (418)
T ss_pred HhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hCcH
Confidence 456666666666666655555556677788888877654 455788888889999999999999999 9999
Q ss_pred hHHHHHHHHHHHHHhhhhhhhh---hHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHH-HHHhhhhccC
Q psy10046 726 KTYAACLIGCGVSTALMPLFAT---NYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTL-LAQGIGNLVG 801 (805)
Q Consensus 726 ~~~~~~~~~~~i~~l~~~~~~~---~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~-~~~~ig~~ig 801 (805)
+++.++.++.++.++++..... ..+.+++..++.|++.+...+....++.+.+|++.+++++|+.+ +..++|+++|
T Consensus 282 ~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iG 361 (418)
T TIGR00889 282 KVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLG 361 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 9999999888877655542221 23445666778888888878888889999999999999999997 6788999998
Q ss_pred CCC
Q psy10046 802 PPL 804 (805)
Q Consensus 802 p~i 804 (805)
|++
T Consensus 362 p~l 364 (418)
T TIGR00889 362 YIL 364 (418)
T ss_pred HHH
Confidence 875
No 84
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.87 E-value=7.2e-21 Score=215.89 Aligned_cols=147 Identities=12% Similarity=0.017 Sum_probs=105.0
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh----cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHH
Q psy10046 655 FLELHFLLVSISTILLFTWFVIPYFYLTDFVTN----QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAA 730 (805)
Q Consensus 655 l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~----~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~ 730 (805)
+|+|.++.+.+..++....+.....++|.|+.+ .+.+....+++.+...++.+++.+++|++.|| +++++.+.+
T Consensus 220 l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr--~g~~~~~~~ 297 (420)
T PRK09528 220 LKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINR--IGAKNALLL 297 (420)
T ss_pred ccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCcchhhHH
Confidence 344444443333333323333333344555443 46676777888888889999999999999999 999999888
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHH-HHHHHhhhhccCCCC
Q psy10046 731 CLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGL-TLLAQGIGNLVGPPL 804 (805)
Q Consensus 731 ~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl-~~~~~~ig~~igp~i 804 (805)
+.++.++..+++. ..++.+.+++..++.|++.+........++.+.+|++.+++.+++ +++...+|+++||++
T Consensus 298 ~~~l~~~~~~l~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~ 371 (420)
T PRK09528 298 AGTIMAVRIIGSG-FATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTL 371 (420)
T ss_pred HHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHH
Confidence 8888777766665 355667677777777887777777777788899999999988776 677788888888764
No 85
>KOG3764|consensus
Probab=99.87 E-value=1.2e-21 Score=208.24 Aligned_cols=149 Identities=15% Similarity=0.223 Sum_probs=139.2
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Q psy10046 191 NEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSY 270 (805)
Q Consensus 191 ~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~ 270 (805)
.+++-+.+++|++++.+.+...+..++.|.+.||+|+|..+++|+++..+.+++.++.++++.+++ .|.++|+|.++..
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~v-AR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFV-ARSLQGVGSAFAD 177 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHH-HHHHhhhhHHHHH
Confidence 345667889999999999999999999999999999999999999999999999999999999977 4999999999999
Q ss_pred HHHHHHHhhhcc--cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhccCC
Q psy10046 271 VTAVVSIAFWFE--KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIMRDP 340 (805)
Q Consensus 271 ~~~~~~l~~~~p--~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~~~p 340 (805)
+.+.+++++.|| ++|+++||+.-.+.++|-.+||++||++.+..|.+.+|++++++.++-.++.++..+|
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCc
Confidence 999999999998 3589999999999999999999999999999999999999999999888888887665
No 86
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.86 E-value=6.7e-20 Score=206.25 Aligned_cols=155 Identities=17% Similarity=0.056 Sum_probs=112.1
Q ss_pred HHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH---HhcC----cHH
Q psy10046 181 SFGLLYI-EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLS---CFSR----TIE 252 (805)
Q Consensus 181 ~~~~~~p-~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~---a~a~----~~~ 252 (805)
.+.+++| ++.+++|.+..+.+++.+++.+++.++++++|+++||+|||+++++++++++++.... .+.+ +..
T Consensus 20 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (396)
T TIGR00882 20 AYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNIL 99 (396)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 3334444 4456799999999999999999999999999999999999999988776665544332 1222 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHH
Q psy10046 253 HMYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCV 332 (805)
Q Consensus 253 ~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i 332 (805)
...+..|++.|++.+...+....+..+.. ++++..++.......+|.++||++++.+.+ .||++.|++.+++.++..+
T Consensus 100 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~ 177 (396)
T TIGR00882 100 VGAIVGGLYLGFVFSAGAGAIEAYIEKVS-RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILML 177 (396)
T ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHhh-hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHH
Confidence 22232477778777776666666555432 334556777778889999999999988765 5999999998877776665
Q ss_pred HHHhc
Q psy10046 333 CGAIM 337 (805)
Q Consensus 333 ~~~~~ 337 (805)
+.++.
T Consensus 178 ~~~~~ 182 (396)
T TIGR00882 178 LLMFA 182 (396)
T ss_pred HHHHh
Confidence 55443
No 87
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.86 E-value=3.7e-19 Score=197.18 Aligned_cols=159 Identities=12% Similarity=0.127 Sum_probs=138.4
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhH-HHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSK-TAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIIS 238 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~-~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~ 238 (805)
|++..+++|.+..+ .-.....+...|++.+++|++..+ .|.+.+++..+|+++.++.|+++||+|.|+++.++++.+
T Consensus 25 W~~~~~~lC~fGF~--~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~W 102 (511)
T TIGR00806 25 WRVLVLYLCFYGFM--AQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSF 102 (511)
T ss_pred hhHHHHHHHHHHHH--HHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 44444434433322 334466777889999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchH
Q psy10046 239 GVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWR 317 (805)
Q Consensus 239 ~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr 317 (805)
++..++.++++++..+.+ +|++.|++.|+.+ +...++..|+| ++|+++.+++.++..+|.+++++++++ +..+|||
T Consensus 103 sl~t~L~~fa~Sl~~L~i-~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr 179 (511)
T TIGR00806 103 VCVWLLLLLGTSVWHMQL-MEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWI 179 (511)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCch
Confidence 999999999999999866 6999999999999 99999999998 789999999999999999999999999 5578999
Q ss_pred HHHHHH
Q psy10046 318 GTVLLL 323 (805)
Q Consensus 318 ~~f~i~ 323 (805)
+.+.+.
T Consensus 180 ~y~~Ln 185 (511)
T TIGR00806 180 SYSTLN 185 (511)
T ss_pred hHHHHH
Confidence 866544
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.85 E-value=2.1e-19 Score=207.22 Aligned_cols=146 Identities=14% Similarity=0.202 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q psy10046 181 SFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEK-FGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFG 259 (805)
Q Consensus 181 ~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr-~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R 259 (805)
..+.+..++.+++|++..+++++.+.|.+...+..+++|+++|| +|||++++++.++++++.++++++.+...++++.|
T Consensus 33 ~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~ 112 (489)
T PRK10207 33 VQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIAL 112 (489)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 34455567788899999999999999999999999999999999 99999999999999999999999877555443469
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-c--chhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHH
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFE-K--KRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGT 326 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p-~--~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~ 326 (805)
+++|+|.|...+...+++.+++| + +|+.++++++.+.++|.++||.+++++.++.|||+.|++.++.
T Consensus 113 ~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~ 182 (489)
T PRK10207 113 GTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAG 182 (489)
T ss_pred HHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHH
Confidence 99999999999999999999886 3 3577999999999999999999999999999999999986553
No 89
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.85 E-value=6.1e-19 Score=198.95 Aligned_cols=150 Identities=12% Similarity=0.169 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-----CChH-HHHHHHHHHHHHHHHHHhc---CcHH
Q psy10046 182 FGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKF-----GCRS-MTIVAGIISGVGFVLSCFS---RTIE 252 (805)
Q Consensus 182 ~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~-----Grr~-vlii~~~l~~i~~i~~a~a---~~~~ 252 (805)
....+|.+.++.|++.+++|++..+... .+..+++|+++||+ |||+ +++++.++.+++.++.++. .+++
T Consensus 18 ~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~ 95 (402)
T PRK11902 18 TSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALW 95 (402)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHH
Confidence 3445688889999999999999777765 58899999999999 8765 7888888888887777776 3466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhc-cchHHHHHHHHHHHHHH
Q psy10046 253 HMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISE-YGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 253 ~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~-~gWr~~f~i~~~~~~~~ 330 (805)
.+++ +.++.+++.+...+...+++.+++| ++|+++.++...+..+|.++++.+++.+.+. .|||+.|++.+++.++.
T Consensus 96 ~l~~-~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~ 174 (402)
T PRK11902 96 PLAG-LAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAG 174 (402)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHH
Confidence 6644 4677788888888899999999998 5699999999999999999999999999885 59999999988776655
Q ss_pred HHHH
Q psy10046 331 CVCG 334 (805)
Q Consensus 331 ~i~~ 334 (805)
.+..
T Consensus 175 ~l~~ 178 (402)
T PRK11902 175 ALTT 178 (402)
T ss_pred HHHH
Confidence 4443
No 90
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.85 E-value=3.4e-20 Score=219.78 Aligned_cols=158 Identities=19% Similarity=0.170 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC---------
Q psy10046 179 AFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR--------- 249 (805)
Q Consensus 179 ~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~--------- 249 (805)
....+..++.+.++|+++..+.|++.+.+.++++++.++.|++.||+|||+++.+++++++++++++++.+
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~ 128 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYS 128 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccc
Confidence 34456677999999999999999999999999999999999999999999999999999999999988752
Q ss_pred ----------------------------------------c-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhH
Q psy10046 250 ----------------------------------------T-IEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGL 287 (805)
Q Consensus 250 ----------------------------------------~-~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~ 287 (805)
+ .+.++++.|+++|+|.+..++.+.+++.+++| ++|++
T Consensus 129 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~ 208 (633)
T TIGR00805 129 TTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPL 208 (633)
T ss_pred ccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHH
Confidence 1 22233446999999999999999999999997 77999
Q ss_pred HHHHHHHHhhHHHhhHHHHHHHHhhcc----------------------chHHHHHHHHHHHHHHHHHHHh
Q psy10046 288 ACSLGSTGTGFGTTVYAPITSYLISEY----------------------GWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 288 a~gi~~~~~~lG~~lgp~i~~~l~~~~----------------------gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
+++++..+..+|+++|+++++++.+.+ +|+..|++.+++.++.++++++
T Consensus 209 ~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 209 YIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFF 279 (633)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988643 2667788877777666554443
No 91
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.84 E-value=8.4e-20 Score=207.81 Aligned_cols=324 Identities=13% Similarity=0.128 Sum_probs=232.0
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh----hCCh-HHHHHHHHHHHHHHHHHHhcCcH------HH
Q psy10046 185 LYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEK----FGCR-SMTIVAGIISGVGFVLSCFSRTI------EH 253 (805)
Q Consensus 185 ~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr----~Grr-~vlii~~~l~~i~~i~~a~a~~~------~~ 253 (805)
+.+++.+++|++..+++++.++..+..++..|+.|+++|| +||| +.++++.++++++.+++.+.++. ..
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 101 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY 101 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 4566777899999999999999999999999999999997 7874 46778888888888887776542 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccchhHHHHHHHHHhhHHHhhHHHHHHHHhh-------ccchHHHHHHHH
Q psy10046 254 MYLTFGLLAGIGLALSYVTAVVSIAFWF--EKKRGLACSLGSTGTGFGTTVYAPITSYLIS-------EYGWRGTVLLLS 324 (805)
Q Consensus 254 l~i~~R~l~G~g~g~~~~~~~~~l~~~~--p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~-------~~gWr~~f~i~~ 324 (805)
+ ++.+++.+++.+....+..++..+.. +++|++..++...+..+|..+++.+.+.+.. ..|||+.+++.+
T Consensus 102 ~-~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 102 A-YITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred H-HHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 3 33567788888776666677777665 3789999999888888888777776655542 468999999888
Q ss_pred HHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhccccccc
Q psy10046 325 GTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAET 404 (805)
Q Consensus 325 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (805)
++.++..++.++..+.+. ++ .
T Consensus 181 ~l~~~~~~~~~~~~~e~~-------~~--~-------------------------------------------------- 201 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERY-------SE--I-------------------------------------------------- 201 (437)
T ss_pred HHHHHHHHHHHcCCEecC-------CC--C--------------------------------------------------
Confidence 877766655544321100 00 0
Q ss_pred cccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCccccc
Q psy10046 405 CKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKN 484 (805)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (805)
+. . .+
T Consensus 202 ------------------------------------~~----------~-~~---------------------------- 206 (437)
T TIGR00792 202 ------------------------------------PK----------N-IE---------------------------- 206 (437)
T ss_pred ------------------------------------Cc----------c-cc----------------------------
Confidence 00 0 00
Q ss_pred CCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCcc
Q psy10046 485 HSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRF 564 (805)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (805)
.+
T Consensus 207 ------------------------------------------------------~~------------------------ 208 (437)
T TIGR00792 207 ------------------------------------------------------KK------------------------ 208 (437)
T ss_pred ------------------------------------------------------cC------------------------
Confidence 00
Q ss_pred ccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHH
Q psy10046 565 QDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARE 644 (805)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (805)
.+.++
T Consensus 209 ---------------------------------------------------------------------------~~~~~ 213 (437)
T TIGR00792 209 ---------------------------------------------------------------------------LSLKQ 213 (437)
T ss_pred ---------------------------------------------------------------------------CCHHH
Confidence 00000
Q ss_pred HHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCcc
Q psy10046 645 LIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLN 723 (805)
Q Consensus 645 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~g 723 (805)
.+ ..++++|.++.+++..++...+......+.+.|.+. .+ +....+.+.....++.+++.+++++++|| ++
T Consensus 214 ~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r--~g 285 (437)
T TIGR00792 214 IF-----KALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKK--FG 285 (437)
T ss_pred HH-----HHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH--hC
Confidence 00 135678888887777777666665555555555543 34 45566677777789999999999999999 99
Q ss_pred chhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccC-------ccchhhhhHHHHHHHhh
Q psy10046 724 VKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVP-------LDRFATAYGLTLLAQGI 796 (805)
Q Consensus 724 r~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~~~a~gl~~~~~~i 796 (805)
+|+++.++.++.+++++.+.+..++.+.+++..++.|++.+...+..+.++++..+ .+..|.++|+.+++..+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 365 (437)
T TIGR00792 286 RKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL 365 (437)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH
Confidence 99998888877777666655333455566667778888888888888888888765 56689999999999999
Q ss_pred hhccCCCC
Q psy10046 797 GNLVGPPL 804 (805)
Q Consensus 797 g~~igp~i 804 (805)
|..+|+.+
T Consensus 366 g~~lg~~i 373 (437)
T TIGR00792 366 GQALAGFL 373 (437)
T ss_pred HHHHHHHH
Confidence 99888754
No 92
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.84 E-value=1.2e-18 Score=200.68 Aligned_cols=150 Identities=15% Similarity=0.179 Sum_probs=130.6
Q ss_pred HHHHHH-HHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q psy10046 184 LLYIEF-LNE--FGASKSKTAWIGSLFMAVPLLLGPVASAFVEK-FGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFG 259 (805)
Q Consensus 184 ~~~p~i-~~~--~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr-~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R 259 (805)
..+|.+ .++ +|++..+++++.+++.+++.++++++|+++|| +|||+++++++++++++.++.+++++++.+++ .|
T Consensus 31 ~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~-~~ 109 (475)
T TIGR00924 31 GILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFY-GL 109 (475)
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHH-HH
Confidence 334444 445 89999999999999999999999999999999 89999999999999999999999988887766 58
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-c---chhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFE-K---KRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCG 334 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p-~---~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~ 334 (805)
++.|+|.|...+...+++++++| + +|+.++++++.+.++|.++||++++++.+++||++.|++.++..++..+..
T Consensus 110 ~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 110 GTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred HHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 99999999988999999999886 3 388899999999999999999999999999999999999876554443333
No 93
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.83 E-value=4.1e-18 Score=191.35 Aligned_cols=157 Identities=16% Similarity=0.056 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHH--HHHHHHHHHHHHHHH-HHHHhhhCChHHHHHHHHHH-HHHHHHHH---hcCc-H
Q psy10046 180 FSFGLLYIEFLNEFGASKSKTAWI--GSLFMAVPLLLGPVA-SAFVEKFGCRSMTIVAGIIS-GVGFVLSC---FSRT-I 251 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~~~l~--~s~~~lg~~ig~l~~-G~LsDr~Grr~vlii~~~l~-~i~~i~~a---~a~~-~ 251 (805)
....+++|.+.++.|.+..++|+. .++..+...+.++++ ++.+||+|||+.+++.+.+. ++.....+ ...+ .
T Consensus 18 ~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 97 (390)
T TIGR02718 18 GLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGA 97 (390)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhH
Confidence 345567899999999999999997 456677777777777 44789999998876655332 22222222 2222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHH
Q psy10046 252 EHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 252 ~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~ 330 (805)
.+++. .-++.+++.+...+...++..+..+ ++++...++...+..+|.++|+.+.+++.+.+|||..|++.+++.++.
T Consensus 98 ~~~~~-~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~ 176 (390)
T TIGR02718 98 GWAVG-LLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLAS 176 (390)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 23323 3345556666666777777777766 567888888888889999999999999999999999999998877766
Q ss_pred HHHHHhc
Q psy10046 331 CVCGAIM 337 (805)
Q Consensus 331 ~i~~~~~ 337 (805)
.+..++.
T Consensus 177 ~~~~~~~ 183 (390)
T TIGR02718 177 LVCVLWL 183 (390)
T ss_pred HHHHHHc
Confidence 6555444
No 94
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.83 E-value=5.7e-18 Score=195.38 Aligned_cols=323 Identities=15% Similarity=0.132 Sum_probs=240.4
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc-----CcHHHHHHHHH
Q psy10046 185 LYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS-----RTIEHMYLTFG 259 (805)
Q Consensus 185 ~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a-----~~~~~l~i~~R 259 (805)
..+.+..+..-|+..++++.++..+...+..+++|.++||+.||++++++-++.++..++.++. .+.+.+++ +-
T Consensus 32 a~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~-~~ 110 (524)
T PF05977_consen 32 ALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLI-LT 110 (524)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHH-HH
Confidence 3455666777789999999999999999999999999999999999999887766554443321 46667655 57
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhcc
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIMR 338 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~~ 338 (805)
++.|++.+...++..+++.+..| ++...+.++..+..++..++||.++|.++...|-.+.|++.++..++.+++.+..+
T Consensus 111 fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~ 190 (524)
T PF05977_consen 111 FLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWK 190 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999988 56899999999999999999999999999999999999988776555444433332
Q ss_pred CCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhccccccccccccccccccccc
Q psy10046 339 DPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKFSSVINIPTYIR 418 (805)
Q Consensus 339 ~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (805)
++.. .+.... +
T Consensus 191 ~~~~--~~~~~~---e---------------------------------------------------------------- 201 (524)
T PF05977_consen 191 PPPP--PSSLPR---E---------------------------------------------------------------- 201 (524)
T ss_pred cccc--ccccch---h----------------------------------------------------------------
Confidence 2100 000000 0
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCCCCCCCCCcccc
Q psy10046 419 NNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSVESDGPHEPLVS 498 (805)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (805)
T Consensus 202 -------------------------------------------------------------------------------- 201 (524)
T PF05977_consen 202 -------------------------------------------------------------------------------- 201 (524)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCcccccccccccccccc
Q psy10046 499 AGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDFLHSKLGVRRDT 578 (805)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (805)
+.
T Consensus 202 ------------------------------------------~~------------------------------------ 203 (524)
T PF05977_consen 202 ------------------------------------------RF------------------------------------ 203 (524)
T ss_pred ------------------------------------------hh------------------------------------
Confidence 00
Q ss_pred ccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHHHhhhccccchhhH
Q psy10046 579 NLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIVGMFDFSMFLEL 658 (805)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 658 (805)
..+.++.++ -+.++|
T Consensus 204 ------------------------------------------------------------~~~l~~G~r-----yv~~~~ 218 (524)
T PF05977_consen 204 ------------------------------------------------------------FSALREGLR-----YVRSSP 218 (524)
T ss_pred ------------------------------------------------------------hhhHHHHHH-----HHhcch
Confidence 000000000 011223
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHH
Q psy10046 659 HFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGV 737 (805)
Q Consensus 659 ~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i 737 (805)
.+...++..++..+....+...+|.+.++ .|.++...|++.+.++++.++|.++.+++.++ +++.+++..+.++.++
T Consensus 219 ~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~--~~~~~lv~~~~~~~a~ 296 (524)
T PF05977_consen 219 PLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR--LSSRRLVLLASLLFAL 296 (524)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cCcchhhHHHHHHHHH
Confidence 33333332333333333344568888875 78999999999999999999999999999988 8888888888888888
Q ss_pred HHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 738 STALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 738 ~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
+++.+. ..++.+...+..++.|++.........+.+....|.+.+|.+++++.++...+..+|..
T Consensus 297 ~~~~la-l~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsl 361 (524)
T PF05977_consen 297 ALLLLA-LSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSL 361 (524)
T ss_pred HHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 887777 56677777888888999988888888899999999999999999998877776666543
No 95
>KOG2615|consensus
Probab=99.81 E-value=1e-18 Score=184.89 Aligned_cols=116 Identities=22% Similarity=0.286 Sum_probs=104.7
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10046 195 ASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAV 274 (805)
Q Consensus 195 ~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~ 274 (805)
.+..-.|.+.+.|.++..+.++.||.++|++|||++++++++..++..++.+++.|+..+ ++.|++.|+.-|- ....-
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~af-v~aR~l~Gi~kgn-l~v~r 142 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAF-VLARFLGGIFKGN-LSVIR 142 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhccCc-hHHHH
Confidence 345568999999999999999999999999999999999999999999999999999555 5459999998775 56677
Q ss_pred HHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhh
Q psy10046 275 VSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLIS 312 (805)
Q Consensus 275 ~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~ 312 (805)
+++++.++ ++|+++|+.+...+++|.++||.|||++..
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 88898886 889999999999999999999999999987
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.80 E-value=1.9e-17 Score=191.93 Aligned_cols=148 Identities=18% Similarity=0.255 Sum_probs=123.5
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHH
Q psy10046 185 LYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEK-FGCRSMTIVAGIISGVGFVLSCFSR-TIEHMYLTFGLLA 262 (805)
Q Consensus 185 ~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr-~Grr~vlii~~~l~~i~~i~~a~a~-~~~~l~i~~R~l~ 262 (805)
+..++.+++|++..+++++.+.+.+......+++|+++|| +|||+.++++.++++++.++++++. +.+.+++ .|++.
T Consensus 44 l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~-~~~l~ 122 (500)
T PRK09584 44 MAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYM-GMATI 122 (500)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHH-HHHHH
Confidence 4456678999999999999888887777777899999999 5999999999999999999998875 4444544 58999
Q ss_pred HHHHHHHHHHHHHHHhhhcccc---hhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q psy10046 263 GIGLALSYVTAVVSIAFWFEKK---RGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 263 G~g~g~~~~~~~~~l~~~~p~~---rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~ 333 (805)
|+|.|...+...+++.+++|++ |+.++++++.+.++|.++||++++++.+++|||+.|++.++..++.++.
T Consensus 123 gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~ 196 (500)
T PRK09584 123 AVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVN 196 (500)
T ss_pred HHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 9999988888888999998732 4568899999999999999999999999999999999877655444433
No 97
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.80 E-value=3e-23 Score=237.31 Aligned_cols=160 Identities=17% Similarity=0.248 Sum_probs=136.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10046 198 SKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR---TIEHMYLTFGLLAGIGLALSYVTAV 274 (805)
Q Consensus 198 ~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~---~~~~l~i~~R~l~G~g~g~~~~~~~ 274 (805)
.+.++..+...+|..+|.+++|.++||+|||++++++.++..++.++.++++ +++.+++ .|++.|++.|+..+...
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLI-GRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 3578999999999999999999999999999999999999999999999999 9999866 69999999999999999
Q ss_pred HHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc---chHHHHHHHHHHHHHHHHHH-HhccCCchhhhhhch
Q psy10046 275 VSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEY---GWRGTVLLLSGTFFNLCVCG-AIMRDPEWWTLEQNK 349 (805)
Q Consensus 275 ~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~---gWr~~f~i~~~~~~~~~i~~-~~~~~p~~~~~~~~~ 349 (805)
.++.|..| ++|++..++...+..+|..++..++..+.... +||+.+++.++..++.++.. ++.++|+|+..+++.
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~ 204 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRD 204 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccc
Confidence 99999987 77999999999999999988888776554433 49999998887765554444 345679999888888
Q ss_pred HHHHHhhhc
Q psy10046 350 EKDLKSIKG 358 (805)
Q Consensus 350 ~~~~~~l~~ 358 (805)
+++.+.+++
T Consensus 205 ~~A~~~l~~ 213 (451)
T PF00083_consen 205 EEAEKVLRK 213 (451)
T ss_pred ccccccccc
Confidence 877765543
No 98
>KOG0252|consensus
Probab=99.78 E-value=7.3e-18 Score=182.38 Aligned_cols=166 Identities=17% Similarity=0.091 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHhHHHH-HHHHHHHHHHHHHh-C-------CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHH
Q psy10046 164 VVLAAFFINMAGDGIA-FSFGLLYIEFLNEF-G-------ASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVA 234 (805)
Q Consensus 164 ~~~~~~~~~~~~~~~~-~~~~~~~p~i~~~~-g-------~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~ 234 (805)
..+++.-+.++.+++. .+++.+.+-+...+ | ++....+.+..+..+|..+|++++|++.|++|||+++...
T Consensus 41 k~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~ 120 (538)
T KOG0252|consen 41 KAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKE 120 (538)
T ss_pred HHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHH
Confidence 3333344445566655 55666655554443 2 4456778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC------c-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHH
Q psy10046 235 GIISGVGFVLSCFSR------T-IEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPI 306 (805)
Q Consensus 235 ~~l~~i~~i~~a~a~------~-~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i 306 (805)
+++..++++++++.. + .+++ .++|++.|+|.|+-+|...++.+|... ++||..+++..+..++|...|.++
T Consensus 121 liImIi~t~~~~~s~~~~~~~~~m~~L-~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~iv 199 (538)
T KOG0252|consen 121 LIIMIICSALSGLSVGTTSPLGVMMTL-CFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIV 199 (538)
T ss_pred HHHHHHHHHHhccCCCCCCCcchhhHH-HHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHH
Confidence 999999999888752 2 3344 558999999999999999999999997 679999999888888887777666
Q ss_pred HHHHhh----c-----------cchHHHHHHHHHHHHHH
Q psy10046 307 TSYLIS----E-----------YGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 307 ~~~l~~----~-----------~gWr~~f~i~~~~~~~~ 330 (805)
+-.+.. . .=||..|.+-++..+++
T Consensus 200 t~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ 238 (538)
T KOG0252|consen 200 ALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLV 238 (538)
T ss_pred HHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 654432 1 12887776554444433
No 99
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.75 E-value=5.2e-17 Score=186.64 Aligned_cols=155 Identities=13% Similarity=0.022 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-----ChHHHHHHHHHHH-HHHHHHHhcCcHHHHH
Q psy10046 182 FGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFG-----CRSMTIVAGIISG-VGFVLSCFSRTIEHMY 255 (805)
Q Consensus 182 ~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~G-----rr~vlii~~~l~~-i~~i~~a~a~~~~~l~ 255 (805)
.....+.+.+++|++.++++...++..+.+.+-++ +|+++|+++ ||+.++++.++.+ +.....+..++...+.
T Consensus 45 ~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~ 123 (468)
T TIGR00788 45 RLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVA 123 (468)
T ss_pred hhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHH
Confidence 34455677778999999999999999999999666 999999997 7777777776663 4444444445655554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchh---HHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHH
Q psy10046 256 LTFGLLAGIGLALSYVTAVVSIAFWFEKKRG---LACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCV 332 (805)
Q Consensus 256 i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg---~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i 332 (805)
+++.++.+++.+...++.-++..+..++++. ...++......+|.++|+.++|.+.+.+||+..|++.+++.++..+
T Consensus 124 ~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~ 203 (468)
T TIGR00788 124 AAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF 203 (468)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 5467899999999999999999988774332 2344555556689999999999999999999999998877776644
Q ss_pred HHHhc
Q psy10046 333 CGAIM 337 (805)
Q Consensus 333 ~~~~~ 337 (805)
..+++
T Consensus 204 ~~~~~ 208 (468)
T TIGR00788 204 VSNLS 208 (468)
T ss_pred HHHhc
Confidence 44444
No 100
>PRK09669 putative symporter YagG; Provisional
Probab=99.74 E-value=1.8e-16 Score=181.28 Aligned_cols=151 Identities=15% Similarity=0.109 Sum_probs=109.1
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh----hCCh-HHHHHHHHHHHHHHHHHHhcCc------HHH
Q psy10046 185 LYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEK----FGCR-SMTIVAGIISGVGFVLSCFSRT------IEH 253 (805)
Q Consensus 185 ~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr----~Grr-~vlii~~~l~~i~~i~~a~a~~------~~~ 253 (805)
+..++.+.+|++...++++.++..+..++..|+.|.++|| +||| +.++++.+.++++.++....++ +.+
T Consensus 32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~ 111 (444)
T PRK09669 32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIY 111 (444)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 3456778899999999999999999999999999999997 8874 5566777777777666555443 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcc--cchhHHHHHHHHHhhHHHhhHHHHHHHHhh-------ccchHHHHHHHH
Q psy10046 254 MYLTFGLLAGIGLALSYVTAVVSIAFWFE--KKRGLACSLGSTGTGFGTTVYAPITSYLIS-------EYGWRGTVLLLS 324 (805)
Q Consensus 254 l~i~~R~l~G~g~g~~~~~~~~~l~~~~p--~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~-------~~gWr~~f~i~~ 324 (805)
+++ .-++.+++......+..++.+++.+ ++|.+..++...+..+|..+++.+...+.. ..||+..+.+.+
T Consensus 112 ~~~-~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 112 ACV-TYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHH-HHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 434 3456666666666667777778774 779988888887777877777665544332 347888888777
Q ss_pred HHHHHHHHHHHh
Q psy10046 325 GTFFNLCVCGAI 336 (805)
Q Consensus 325 ~~~~~~~i~~~~ 336 (805)
++.+++.++.++
T Consensus 191 ii~~v~~~~~~~ 202 (444)
T PRK09669 191 LLGVVLFFCCFF 202 (444)
T ss_pred HHHHHHHHHHhC
Confidence 776665554443
No 101
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.73 E-value=3.5e-15 Score=169.69 Aligned_cols=152 Identities=14% Similarity=0.110 Sum_probs=114.8
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHh----hhCChHHHHHH-HHHHHHHHHHHHhcCcHHH-------
Q psy10046 186 YIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVE----KFGCRSMTIVA-GIISGVGFVLSCFSRTIEH------- 253 (805)
Q Consensus 186 ~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsD----r~Grr~vlii~-~~l~~i~~i~~a~a~~~~~------- 253 (805)
++.+.+++|++....+++..+..+...+.++++|.++| |+|||+.++++ .+...++.++.++++++..
T Consensus 27 l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~ 106 (477)
T TIGR01301 27 LTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLD 106 (477)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcccccc
Confidence 44567889999999999999999999999999999999 59999988775 5566666677777665431
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cc--hhHHHHHHHHHhhHHHhhHHHHHHHH--hhcc-----
Q psy10046 254 ---------MYLTFGLLAGIGLALSYVTAVVSIAFWFE-KK--RGLACSLGSTGTGFGTTVYAPITSYL--ISEY----- 314 (805)
Q Consensus 254 ---------l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~--rg~a~gi~~~~~~lG~~lgp~i~~~l--~~~~----- 314 (805)
+++..-.+..++.....++..+++++..| ++ ++.+.++...+.++|.++|+.++++. ...+
T Consensus 107 ~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~ 186 (477)
T TIGR01301 107 KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKT 186 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccc
Confidence 11111223445777778888899999987 43 36899999999999999999999875 2211
Q ss_pred --------chHHHHHHHHHHHHHHHHHHHhc
Q psy10046 315 --------GWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 315 --------gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
+.|+.|++.+++.++..++.++.
T Consensus 187 ~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~ 217 (477)
T TIGR01301 187 EACGVSCANLKSCFLIDIILLAILTYIALSA 217 (477)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence 56889998777666666655554
No 102
>KOG4686|consensus
Probab=99.72 E-value=4.8e-18 Score=172.20 Aligned_cols=153 Identities=20% Similarity=0.222 Sum_probs=122.7
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEK-FGCRSMTIVAGIIS 238 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr-~Grr~vlii~~~l~ 238 (805)
.|...++..++..|..+..+...+.+..++..+.+++.++..++.++|.....+.+.++|++.|| +|-|..-++-+++.
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 44555555555555555555556777778888889999999999999999999999999999995 89888777777777
Q ss_pred HHHHHHHHh---cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhc
Q psy10046 239 GVGFVLSCF---SRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISE 313 (805)
Q Consensus 239 ~i~~i~~a~---a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~ 313 (805)
.++.++.+. .+.+|++.. .||+.|+|+-...++...++..||. |+.+.++|+.....-+|..+--.+.+++.+.
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~-GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLA-GRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHh-hheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 777777654 567888755 6999999988888888888889997 9999999999999999987766666666654
No 103
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.71 E-value=2.6e-15 Score=168.41 Aligned_cols=150 Identities=17% Similarity=0.205 Sum_probs=123.9
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcC-CChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHH
Q psy10046 653 SMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQG-LSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAAC 731 (805)
Q Consensus 653 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G-~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~ 731 (805)
+++|+|.++.+.+..++........+.|.+.|+++.| ++....+.+.++..++.++.-...+++..| ++.++++.++
T Consensus 202 ~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r--~g~~~ll~~a 279 (400)
T PF03825_consen 202 KLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR--FGIKWLLLLA 279 (400)
T ss_pred HHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHH
Confidence 6789999999989888888888888999999999988 777778887788888889999999999999 9999999999
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHH----HHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHH-HHhhhhccCCCC
Q psy10046 732 LIGCGVSTALMPLFATNYWALLFT----CLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLL-AQGIGNLVGPPL 804 (805)
Q Consensus 732 ~~~~~i~~l~~~~~~~~~~~~~~~----~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~-~~~ig~~igp~i 804 (805)
.+..++=..++....++.+...+. .++-|+.++..+.....++.+.+|++.++++.|++.+ ..++|+++|..+
T Consensus 280 ~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~i 357 (400)
T PF03825_consen 280 LVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLI 357 (400)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHH
Confidence 988888777666432444433322 3458999999999999999999999999999999876 467888877654
No 104
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.68 E-value=2e-14 Score=164.26 Aligned_cols=153 Identities=16% Similarity=0.203 Sum_probs=120.5
Q ss_pred HHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhcC-cHHHHHH
Q psy10046 180 FSFGLLYI-EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKF-GCRSMTIVAGIISGVGFVLSCFSR-TIEHMYL 256 (805)
Q Consensus 180 ~~~~~~~p-~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~-Grr~vlii~~~l~~i~~i~~a~a~-~~~~l~i 256 (805)
+.+..++| ++.+++|++..+++.+.+.+.+...++++++|+++||+ |||++++++.++.+++.++.++.. +...+++
T Consensus 26 Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l 105 (493)
T PRK15462 26 YGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYL 105 (493)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 33433444 44567899999999999999999999999999999999 999999999999999987776543 2222323
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccc---chhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q psy10046 257 TFGLLAGIGLALSYVTAVVSIAFWFEK---KRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 257 ~~R~l~G~g~g~~~~~~~~~l~~~~p~---~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~ 333 (805)
+ -.+.++|.|...+...+++++.+|+ +|..++++++.+..+|..++|++++++.+.+||++.|++.++..++.++.
T Consensus 106 ~-l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 106 S-LAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred H-HHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHH
Confidence 2 2344566666667777888998873 59999999999999999999999999999999999999876544443333
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.68 E-value=6.3e-15 Score=169.97 Aligned_cols=149 Identities=14% Similarity=0.070 Sum_probs=107.1
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHH
Q psy10046 654 MFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLI 733 (805)
Q Consensus 654 ~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~ 733 (805)
+++|+.++.+++..++..........+.+.|++....+....+.+....+++.+++.++.+++.|| +|+|+.+.++.+
T Consensus 227 ~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r--~gkk~~~~~~~~ 304 (473)
T PRK10429 227 IYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKS--LSRRILWAGASI 304 (473)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCcHHHHHHHHH
Confidence 457888888777777766666655555555555444455556666667778889999999999999 999999887776
Q ss_pred HHHHHHhhhhh----hhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccC-------ccchhhhhHHHHHHHhhhhccCC
Q psy10046 734 GCGVSTALMPL----FATNYWALLFTCLSFGIFFASNFSCTPIILVELVP-------LDRFATAYGLTLLAQGIGNLVGP 802 (805)
Q Consensus 734 ~~~i~~l~~~~----~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~~~a~gl~~~~~~ig~~igp 802 (805)
+..++.+.+.. ...+.+.+++..++.|++.+...+..+++++|..+ .+..|..+|+..++..+|..+|+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~ 384 (473)
T PRK10429 305 FPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAA 384 (473)
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHH
Confidence 65544433321 13345566667778888888888888999999854 45566688999999999888876
Q ss_pred CC
Q psy10046 803 PL 804 (805)
Q Consensus 803 ~i 804 (805)
.+
T Consensus 385 ~i 386 (473)
T PRK10429 385 FF 386 (473)
T ss_pred HH
Confidence 53
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.67 E-value=6.7e-16 Score=175.78 Aligned_cols=322 Identities=16% Similarity=0.195 Sum_probs=238.6
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHh----hhCChH-HHHHHHHHHHHHHHHHHhc-C-------cH
Q psy10046 185 LYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVE----KFGCRS-MTIVAGIISGVGFVLSCFS-R-------TI 251 (805)
Q Consensus 185 ~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsD----r~Grr~-vlii~~~l~~i~~i~~a~a-~-------~~ 251 (805)
+.+++.+.+|+++..++++..+..+..++..|+.|.++| |+|||+ .++++.++.+++.+++... + ..
T Consensus 24 ~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~ 103 (428)
T PF13347_consen 24 LLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKL 103 (428)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHH
Confidence 345667778999999999999999999999999999999 899766 5667778888887777765 3 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--cchhHHHHHHHHHhhHHHhhHHHHHHHHhhc-------cchHHHHHH
Q psy10046 252 EHMYLTFGLLAGIGLALSYVTAVVSIAFWFE--KKRGLACSLGSTGTGFGTTVYAPITSYLISE-------YGWRGTVLL 322 (805)
Q Consensus 252 ~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p--~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~-------~gWr~~f~i 322 (805)
.++++ .-++..++......+..++..+..+ ++|.+..++-..+..+|..+...+.+.+... .+|++..++
T Consensus 104 ~~~~~-~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 104 VWLFV-FYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHH-HHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 23334 3466678888888888888888875 6799999998888888887666666655532 169999888
Q ss_pred HHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhccccc
Q psy10046 323 LSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNA 402 (805)
Q Consensus 323 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (805)
.+++.++..++.++..+.+ .++. +
T Consensus 183 ~~iv~~v~~~i~~~~~ke~-------~~~~-~------------------------------------------------ 206 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKER-------SVEV-T------------------------------------------------ 206 (428)
T ss_pred HHHHHHHHhhhhhheeeec-------cccc-c------------------------------------------------
Confidence 8877776666555532110 0000 0
Q ss_pred cccccccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCccc
Q psy10046 403 ETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLV 482 (805)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (805)
+ .+
T Consensus 207 -------------------~--------------------------------~~-------------------------- 209 (428)
T PF13347_consen 207 -------------------E--------------------------------QE-------------------------- 209 (428)
T ss_pred -------------------c--------------------------------cc--------------------------
Confidence 0 00
Q ss_pred ccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCC
Q psy10046 483 KNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGH 562 (805)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (805)
.
T Consensus 210 --------------------------------------------------------~----------------------- 210 (428)
T PF13347_consen 210 --------------------------------------------------------K----------------------- 210 (428)
T ss_pred --------------------------------------------------------c-----------------------
Confidence 0
Q ss_pred ccccccccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhH
Q psy10046 563 RFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDA 642 (805)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (805)
.....
T Consensus 211 ----------------------------~~~~~----------------------------------------------- 215 (428)
T PF13347_consen 211 ----------------------------KISLR----------------------------------------------- 215 (428)
T ss_pred ----------------------------ccccc-----------------------------------------------
Confidence 00000
Q ss_pred HHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCC
Q psy10046 643 RELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPW 721 (805)
Q Consensus 643 ~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~ 721 (805)
+.+ ..++++|.++.+++..++...+......+.+.|.+. .|.+ ...+.+.....++.+++.+++++++||
T Consensus 216 -~~~-----~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r-- 286 (428)
T PF13347_consen 216 -DSL-----RSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKR-- 286 (428)
T ss_pred -cch-----hhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 000 245678888888888888888877777777777776 4555 456667778889999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHhhhhhhh-hhHHHHHHHHHHHhhhhhhhchhhhhhhhhccC-------ccchhhhhHHHHHH
Q psy10046 722 LNVKKTYAACLIGCGVSTALMPLFA-TNYWALLFTCLSFGIFFASNFSCTPIILVELVP-------LDRFATAYGLTLLA 793 (805)
Q Consensus 722 ~gr~~~~~~~~~~~~i~~l~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~~~a~gl~~~~ 793 (805)
+|+++++.++.++.+++.+++.+.. ++.+.+++..++.|++.+..+.+.+++++|+.+ .+..|..+|+.+++
T Consensus 287 ~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~ 366 (428)
T PF13347_consen 287 FGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFF 366 (428)
T ss_pred ccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhh
Confidence 9999999999999988887776544 578888999999999999999999999999876 34568888999998
Q ss_pred HhhhhccCCC
Q psy10046 794 QGIGNLVGPP 803 (805)
Q Consensus 794 ~~ig~~igp~ 803 (805)
..+|..+++.
T Consensus 367 ~k~~~~la~~ 376 (428)
T PF13347_consen 367 IKIGQGLAGA 376 (428)
T ss_pred hHHHHHHHHH
Confidence 8888877654
No 107
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.65 E-value=5.9e-15 Score=160.51 Aligned_cols=145 Identities=16% Similarity=0.181 Sum_probs=113.7
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh---cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHH
Q psy10046 654 MFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN---QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAA 730 (805)
Q Consensus 654 ~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~---~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~ 730 (805)
+++++.+++..+..+++.........|++.|+.+ .|+++.++++.++.+.++.++|+++++++.|| +++++++.+
T Consensus 136 ~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r--~g~~~~l~~ 213 (310)
T TIGR01272 136 AFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM--ISQGRYLAF 213 (310)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCHHHHHHH
Confidence 4567788887777777777888888999999975 48999999999999999999999999999999 998888887
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 731 CLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 731 ~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+.+++.++.+++.. .+... .....+++|++.+..+|.......+.+|.+ .+++.++. ....+|++++|++
T Consensus 214 ~~~l~~~~~~l~~~-~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l 283 (310)
T TIGR01272 214 NAFLAVLLSIGAAL-THGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLL 283 (310)
T ss_pred HHHHHHHHHHHHHH-cCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHH
Confidence 77777666655442 23332 234566789999999999988888887643 46667775 5667888888863
No 108
>PRK09848 glucuronide transporter; Provisional
Probab=99.63 E-value=3.9e-14 Score=162.23 Aligned_cols=150 Identities=9% Similarity=-0.019 Sum_probs=114.2
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHH
Q psy10046 653 SMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAAC 731 (805)
Q Consensus 653 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~ 731 (805)
.++|++.++.+++..++...++.....+.|.|+++ .|.+....++......++.+++.++.+++.+| +++++++.++
T Consensus 223 ~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r--~g~~~~~~~g 300 (448)
T PRK09848 223 TLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR--IGKKNTFLIG 300 (448)
T ss_pred HHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHH
Confidence 45788889888888777777777766677777765 67766655555555566778889999999999 9999999888
Q ss_pred HHHHHHHHhhhhhhh-hhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCcc-------chhhhhHHHHHHHhhhhccCCC
Q psy10046 732 LIGCGVSTALMPLFA-TNYWALLFTCLSFGIFFASNFSCTPIILVELVPLD-------RFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 732 ~~~~~i~~l~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~-------~~~~a~gl~~~~~~ig~~igp~ 803 (805)
.++++++++++.+.. .+.+.+++..++.|+|.+...+...++.++..+.+ ..|..+|+.++.+.+|..+|+.
T Consensus 301 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~ 380 (448)
T PRK09848 301 ALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGS 380 (448)
T ss_pred HHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHH
Confidence 887777665554322 34555666677888998888888888888887643 4689999999999999988765
Q ss_pred C
Q psy10046 804 L 804 (805)
Q Consensus 804 i 804 (805)
+
T Consensus 381 i 381 (448)
T PRK09848 381 I 381 (448)
T ss_pred H
Confidence 3
No 109
>PRK11462 putative transporter; Provisional
Probab=99.63 E-value=1.5e-13 Score=157.78 Aligned_cols=149 Identities=12% Similarity=0.070 Sum_probs=108.7
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh----hCChH-HHHHHHHHHHHHHHHHHhcCc------HHHH
Q psy10046 186 YIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEK----FGCRS-MTIVAGIISGVGFVLSCFSRT------IEHM 254 (805)
Q Consensus 186 ~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr----~Grr~-vlii~~~l~~i~~i~~a~a~~------~~~l 254 (805)
..++.+.+|++...+|.+..+.-+--++.-|+.|.++|| +|||+ .++++.+.++++.+++-..++ +..+
T Consensus 33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~ 112 (460)
T PRK11462 33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYA 112 (460)
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 345567789999999999999999999999999999995 79765 566677777777766654442 2333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc--cchhHHHHHHHHHhhHHHhhHHHHHHHHhhc-------cchHHHHHHHHH
Q psy10046 255 YLTFGLLAGIGLALSYVTAVVSIAFWFE--KKRGLACSLGSTGTGFGTTVYAPITSYLISE-------YGWRGTVLLLSG 325 (805)
Q Consensus 255 ~i~~R~l~G~g~g~~~~~~~~~l~~~~p--~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~-------~gWr~~f~i~~~ 325 (805)
++ .-++..++......+..++..+..+ ++|.+..++...+..+|..+++.+...+... .||+....+.++
T Consensus 113 ~~-~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~i 191 (460)
T PRK11462 113 AI-TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSV 191 (460)
T ss_pred HH-HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 33 3356677777777777788887774 7899999999999998888887776555443 357777666666
Q ss_pred HHHHHHHHHH
Q psy10046 326 TFFNLCVCGA 335 (805)
Q Consensus 326 ~~~~~~i~~~ 335 (805)
+.+++.++.+
T Consensus 192 i~~i~~~i~~ 201 (460)
T PRK11462 192 VAFMMLAFCF 201 (460)
T ss_pred HHHHHHHHHH
Confidence 5555444433
No 110
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.62 E-value=6.7e-13 Score=151.88 Aligned_cols=150 Identities=18% Similarity=0.248 Sum_probs=125.4
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHH-hcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccch--hHHH
Q psy10046 653 SMFLELHFLLVSISTILLFTWFVIPYFYLTDFVT-NQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVK--KTYA 729 (805)
Q Consensus 653 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~-~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~--~~~~ 729 (805)
++-|.|....++++.++..-+...+......|.. ..|++..+...+.....+.+++|.+++|++.|| +|.| +++.
T Consensus 276 ~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r--~g~k~~~~l~ 353 (477)
T PF11700_consen 276 EIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR--FGPKTKRTLL 353 (477)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCchhHHHH
Confidence 3446678888888888888888888888888888 489999999888889999999999999999999 7777 7766
Q ss_pred HHHHHHHHHHhhhhh-------hhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCC
Q psy10046 730 ACLIGCGVSTALMPL-------FATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGP 802 (805)
Q Consensus 730 ~~~~~~~i~~l~~~~-------~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp 802 (805)
+++++..+..+.-.+ -.++.+.++++.+++|++.|...+..-.+.+++.|+++.+..+|++.+.....+++||
T Consensus 354 ~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGP 433 (477)
T PF11700_consen 354 ISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGP 433 (477)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 666555333322221 1457788899999999999999999999999999999999999999999999999999
Q ss_pred CC
Q psy10046 803 PL 804 (805)
Q Consensus 803 ~i 804 (805)
.+
T Consensus 434 ll 435 (477)
T PF11700_consen 434 LL 435 (477)
T ss_pred HH
Confidence 64
No 111
>KOG2563|consensus
Probab=99.58 E-value=8.9e-14 Score=151.32 Aligned_cols=156 Identities=21% Similarity=0.346 Sum_probs=119.4
Q ss_pred CchhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q psy10046 158 GGWGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGII 237 (805)
Q Consensus 158 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l 237 (805)
-++||.++++..+..+.....-..+++...++...|| +...+-|...+|++.+....+++-|+.|++|-|..++++.++
T Consensus 40 y~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~l 118 (480)
T KOG2563|consen 40 YPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVL 118 (480)
T ss_pred chhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHH
Confidence 3468999988888887655544667777777788888 777888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC-----cHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHH
Q psy10046 238 SGVGFVLSCFSR-----TIEH--MYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSY 309 (805)
Q Consensus 238 ~~i~~i~~a~a~-----~~~~--l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~ 309 (805)
-++|..+-..+. +... +.+....+.+++.-..+....-+...||+ ++|..|..+-.++..+|.++|-++...
T Consensus 119 n~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppi 198 (480)
T KOG2563|consen 119 NGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPI 198 (480)
T ss_pred HHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccce
Confidence 999998866552 2222 22223555555544444444455558996 889999999988888888888888777
Q ss_pred Hhhcc
Q psy10046 310 LISEY 314 (805)
Q Consensus 310 l~~~~ 314 (805)
++.+-
T Consensus 199 lV~~~ 203 (480)
T KOG2563|consen 199 LVPSS 203 (480)
T ss_pred ecCCC
Confidence 77543
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.57 E-value=4.1e-13 Score=149.99 Aligned_cols=321 Identities=17% Similarity=0.152 Sum_probs=236.6
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHh----hhCC-hHHHHHHHHHHHHHHHHHHhcCc------HHHHHH
Q psy10046 188 EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVE----KFGC-RSMTIVAGIISGVGFVLSCFSRT------IEHMYL 256 (805)
Q Consensus 188 ~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsD----r~Gr-r~vlii~~~l~~i~~i~~a~a~~------~~~l~i 256 (805)
++.+.+|++...+|.++.+.-+--++.-|+.|.++| |+|| |+.++++.+.+++.++++-.+++ ....++
T Consensus 38 fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v 117 (467)
T COG2211 38 FYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV 117 (467)
T ss_pred HHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH
Confidence 445668999999999999999999999999999999 4886 45677788899998888877663 233334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc--ccchhHHHHHHHHHhhHHHhhHHHHHHHHhh-------ccchHHHHHHHHHHH
Q psy10046 257 TFGLLAGIGLALSYVTAVVSIAFWF--EKKRGLACSLGSTGTGFGTTVYAPITSYLIS-------EYGWRGTVLLLSGTF 327 (805)
Q Consensus 257 ~~R~l~G~g~g~~~~~~~~~l~~~~--p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~-------~~gWr~~f~i~~~~~ 327 (805)
. -++.+++......+..++..++. |++|.+..++...+..+|..+...+...++. ..||+...++.+++.
T Consensus 118 t-Y~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~ 196 (467)
T COG2211 118 T-YMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIG 196 (467)
T ss_pred H-HHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHH
Confidence 4 47888999988888888888776 4789999999999988887666655555443 347888877777776
Q ss_pred HHHHHHHHhccCCchhhhhhchHHHHHhhhccCCCCCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhcccccccccc
Q psy10046 328 FNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSCGSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKF 407 (805)
Q Consensus 328 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (805)
++..+..++-...+ ..+
T Consensus 197 ~i~~l~~~~~v~ER-------~~~-------------------------------------------------------- 213 (467)
T COG2211 197 VILLLFCFFNVKER-------VVE-------------------------------------------------------- 213 (467)
T ss_pred HHHHHHHHHHhhcc-------cCc--------------------------------------------------------
Confidence 66665555421100 000
Q ss_pred ccccccccccccccccccCCCCCCCCCCCCCCCCCCCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCC
Q psy10046 408 SSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPEPNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSV 487 (805)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (805)
.+ +. +.+
T Consensus 214 --------------~~-----------------~~----------~~~-------------------------------- 220 (467)
T COG2211 214 --------------TQ-----------------PT----------KTG-------------------------------- 220 (467)
T ss_pred --------------cc-----------------cC----------ccc--------------------------------
Confidence 00 00 000
Q ss_pred CCCCCCCcccccCCCCCcccccCCCCCCCCCCcccCCCCcccccccccccCCccccccccccccchhhhhhcCCCccccc
Q psy10046 488 ESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHRSDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDF 567 (805)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (805)
.+.
T Consensus 221 ---------------------------------------------------~~~-------------------------- 223 (467)
T COG2211 221 ---------------------------------------------------VKL-------------------------- 223 (467)
T ss_pred ---------------------------------------------------ccc--------------------------
Confidence 000
Q ss_pred cccccccccccccccccCCCcccccCccCCCccccccccccccccccccchhheeccccccccccccCccchhhHHHHHh
Q psy10046 568 LHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWVFDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIV 647 (805)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (805)
+..+.+
T Consensus 224 -------------------------------------------------------------------------~~~~~~- 229 (467)
T COG2211 224 -------------------------------------------------------------------------KLKDSF- 229 (467)
T ss_pred -------------------------------------------------------------------------cHHHHH-
Confidence 000000
Q ss_pred hhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchh
Q psy10046 648 GMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKK 726 (805)
Q Consensus 648 ~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~ 726 (805)
..+++|+.+..+++..++...+..........|.+. .|.++..+.+.......+.+++.++...+++| +|+|+
T Consensus 230 ----~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~--~gkk~ 303 (467)
T COG2211 230 ----LLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK--FGKKK 303 (467)
T ss_pred ----HHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH--hchHH
Confidence 135688888888888888888887777777777764 78888888888878888888889999999999 99999
Q ss_pred HHHHHHHHHHHHHhhhhhhh-hhHHHHHHHHHHHhhhhhhhchhhhhhhhhccC-------ccchhhhhHHHHHHHhhhh
Q psy10046 727 TYAACLIGCGVSTALMPLFA-TNYWALLFTCLSFGIFFASNFSCTPIILVELVP-------LDRFATAYGLTLLAQGIGN 798 (805)
Q Consensus 727 ~~~~~~~~~~i~~l~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~~~a~gl~~~~~~ig~ 798 (805)
++.++.++..++.+++.+.. ++.+.++++.++.+++.+...++.+++++|.+. .+.-|..+|...+++-+|.
T Consensus 304 ~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ 383 (467)
T COG2211 304 LFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGL 383 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 99999999888887776544 356666777788899999999999999998753 5666788899999888888
Q ss_pred ccCC
Q psy10046 799 LVGP 802 (805)
Q Consensus 799 ~igp 802 (805)
+++.
T Consensus 384 ala~ 387 (467)
T COG2211 384 ALAG 387 (467)
T ss_pred HHHH
Confidence 7764
No 113
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.55 E-value=6.5e-13 Score=147.02 Aligned_cols=147 Identities=15% Similarity=0.123 Sum_probs=115.1
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh----cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHH
Q psy10046 653 SMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN----QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTY 728 (805)
Q Consensus 653 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~----~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~ 728 (805)
+++|+|++|.+.+........+..+....+.|+.. .+.+....|++.+..-+..++...+..++.+| +|.|+.+
T Consensus 215 ~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r--ig~k~~L 292 (412)
T PF01306_consen 215 SLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR--IGAKNLL 292 (412)
T ss_dssp HHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-HHHHH
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh--cChHhHH
Confidence 67899999999887777666666665555666654 44555667788888888889999999999999 9999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHH-HHHHhhhhccCC
Q psy10046 729 AACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLT-LLAQGIGNLVGP 802 (805)
Q Consensus 729 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~-~~~~~ig~~igp 802 (805)
.++.+++.+=.+... ..++++.+.+.-.+-|+-.+.......-++++.++++..++.+.+. .+..++|.++.+
T Consensus 293 llag~i~~iRi~~~~-~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s 366 (412)
T PF01306_consen 293 LLAGVIMAIRIIGSG-FATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILS 366 (412)
T ss_dssp HHHHHHHHHHHHHHH-T--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-hhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999888888777776 5778888888889999988888888888999999999999999886 466677766544
No 114
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.45 E-value=8.9e-12 Score=135.34 Aligned_cols=146 Identities=18% Similarity=0.202 Sum_probs=121.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhHHHHHH-hcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHH
Q psy10046 656 LELHFLLVSISTILLFTWFVIPYFYLTDFVT-NQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIG 734 (805)
Q Consensus 656 ~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~-~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~ 734 (805)
+++.+..+.+..++..-+..........|.. ++|++..+..++.....+.+++|.++.|+|.+| ++.|.++.+++++
T Consensus 250 ~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r--fg~k~vl~~~lvi 327 (438)
T COG2270 250 GRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER--FGSKPVLMIGLVI 327 (438)
T ss_pred cccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCceeehHHHHH
Confidence 3445556666666666666667777777877 589999999999999999999999999999999 9988888888877
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 735 CGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 735 ~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
..+.++... +......++++.+++|++.|...+..-.+..+.+|+++-+..+|++++....++++||.+
T Consensus 328 ~~~~~~~~~-~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~l 396 (438)
T COG2270 328 LSIAALYLI-FLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFL 396 (438)
T ss_pred HHHHHHHHH-HccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHH
Confidence 776666554 344456677788899999999999999999999999999999999999999999999853
No 115
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.42 E-value=1.3e-14 Score=168.15 Aligned_cols=131 Identities=18% Similarity=0.155 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC------------
Q psy10046 182 FGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR------------ 249 (805)
Q Consensus 182 ~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~------------ 249 (805)
....+..+.+.|+++..+.|++.+.|-++..+..++.+++..|.-|-+++-++.++.+++++++++-+
T Consensus 22 ~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~ 101 (539)
T PF03137_consen 22 VNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEAS 101 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccc
Confidence 34446789999999999999999999999999999999999998788899999999999988876520
Q ss_pred -------------------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHH
Q psy10046 250 -------------------------------------TIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSL 291 (805)
Q Consensus 250 -------------------------------------~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi 291 (805)
.+..+++...++.|+|.+..++.+.+++-+..+ ++-+..+|+
T Consensus 102 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi 181 (539)
T PF03137_consen 102 NSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGI 181 (539)
T ss_dssp --------------------------------------------------SSS---------------------------
T ss_pred ccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhh
Confidence 011233445899999999999999999998876 778999999
Q ss_pred HHHHhhHHHhhHHHHHHHHhh
Q psy10046 292 GSTGTGFGTTVYAPITSYLIS 312 (805)
Q Consensus 292 ~~~~~~lG~~lgp~i~~~l~~ 312 (805)
+.+...+|+++|-++++.+..
T Consensus 182 ~~~~~~lGPa~Gf~lg~~~L~ 202 (539)
T PF03137_consen 182 LYAMSILGPALGFLLGSFCLR 202 (539)
T ss_dssp ---------------------
T ss_pred hhHHhhccHHHHHHHHHHHHh
Confidence 999999999999999987764
No 116
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.41 E-value=4.1e-11 Score=138.96 Aligned_cols=180 Identities=12% Similarity=0.050 Sum_probs=129.0
Q ss_pred HHHHHHHHHHH-HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH---HHhcCcHHHHH
Q psy10046 180 FSFGLLYIEFL-NEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVL---SCFSRTIEHMY 255 (805)
Q Consensus 180 ~~~~~~~p~i~-~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~---~a~a~~~~~l~ 255 (805)
+....++|.+. +.+|.+....++..+...++..++.+++|+++||+|||++++++.++..++.++ ...+.+...++
T Consensus 267 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (490)
T PRK10642 267 YMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIF 346 (490)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 34444556655 568998888888888899999999999999999999999988887654443322 22344566654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc-chHHHHHHHHHHHHHHHHH
Q psy10046 256 LTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEY-GWRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 256 i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~-gWr~~f~i~~~~~~~~~i~ 333 (805)
+ .+++.|++.+........++.+++| +.|+.++++......+++.++|.+.+++.+.. +|+..+++..+..++.++.
T Consensus 347 ~-~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~ 425 (490)
T PRK10642 347 A-GLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT 425 (490)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 4 5888888877766677777778888 66999999755545566778999999988765 4777777666555555554
Q ss_pred HHh-ccCCchhhhh-----hchHHHHHhhhccC
Q psy10046 334 GAI-MRDPEWWTLE-----QNKEKDLKSIKGAS 360 (805)
Q Consensus 334 ~~~-~~~p~~~~~~-----~~~~~~~~~l~~~~ 360 (805)
.++ .+.|+++..+ ++.+++.+.+.+.+
T Consensus 426 ~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 426 GVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 444 3455665543 77788888887654
No 117
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.39 E-value=1.1e-10 Score=127.18 Aligned_cols=145 Identities=19% Similarity=0.139 Sum_probs=107.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHH
Q psy10046 656 LELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIG 734 (805)
Q Consensus 656 ~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~ 734 (805)
.+|+...+++..++..++++.-...+-.|.-+ +|++..+++.+....+.+..+|.++.|++..|+ .+++++..+++++
T Consensus 206 ~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~-~~~~~~a~~G~~~ 284 (403)
T PF03209_consen 206 ASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRR-LGKKRTAALGCLL 284 (403)
T ss_pred hCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCchHHHHHHHHH
Confidence 34444444444455555555544555555544 799999999999999999999999999988853 6666776677766
Q ss_pred HHHHHhhhhh--hhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccC
Q psy10046 735 CGVSTALMPL--FATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVG 801 (805)
Q Consensus 735 ~~i~~l~~~~--~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~ig 801 (805)
+.+++.++.. ...+.+.+....+++|++.|.........+.+...+++.|+.+|+..+.+.++..+|
T Consensus 285 ~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg 353 (403)
T PF03209_consen 285 GALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLG 353 (403)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 6666555432 234678888899999999998888888888899999999999999998887766554
No 118
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.39 E-value=5e-11 Score=134.17 Aligned_cols=153 Identities=10% Similarity=0.087 Sum_probs=125.0
Q ss_pred HHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy10046 184 LLYI-EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLA 262 (805)
Q Consensus 184 ~~~p-~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~ 262 (805)
...| ++.+++|++..+++++.++..++..++.+++|+++||+|||+.+.++.+...+......+.++.+.+++ ++++.
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~l~ 315 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLG-LQLLN 315 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHH
Confidence 3344 445678999999999888888888889999999999999999888777666665555556677776645 58888
Q ss_pred HHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 263 GIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 263 G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
+++.+...+....+..+.+|+++|++++++.....+|..++|.++|.+.++.||++.|++.+++.++.+++.++.
T Consensus 316 ~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 316 AIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 888777777777777888998899999999999999999999999999999999999998777777666665554
No 119
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.39 E-value=4.6e-11 Score=132.61 Aligned_cols=153 Identities=17% Similarity=0.235 Sum_probs=131.8
Q ss_pred HHHHHHHHHhC----CChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHHHHHHhcC--cHHHHHH
Q psy10046 184 LLYIEFLNEFG----ASKSKTAWIGSLFMAVPLLLGPVASAFVEK-FGCRSMTIVAGIISGVGFVLSCFSR--TIEHMYL 256 (805)
Q Consensus 184 ~~~p~i~~~~g----~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr-~Grr~vlii~~~l~~i~~i~~a~a~--~~~~l~i 256 (805)
++.-++..+++ ++++++.-+.+.|..-..+.+.++|+++|| +|+|+.++++.++..+|.++.+.+. +...+++
T Consensus 43 iL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i 122 (498)
T COG3104 43 ILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYI 122 (498)
T ss_pred HHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHH
Confidence 33445666666 999999999999998888999999999998 6999999999999999999999884 6778878
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccc---chhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q psy10046 257 TFGLLAGIGLALSYVTAVVSIAFWFEK---KRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 257 ~~R~l~G~g~g~~~~~~~~~l~~~~p~---~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~ 333 (805)
++ ++.++|.|..-+....++++.+|+ +|-..+++++++.++|+.++|++.+++.+.+||...|-+.++-....++.
T Consensus 123 ~L-~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~ 201 (498)
T COG3104 123 GL-ALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVI 201 (498)
T ss_pred HH-HHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 64 677899999999999999987752 37788999999999999999999999999999999999888777766666
Q ss_pred HHhc
Q psy10046 334 GAIM 337 (805)
Q Consensus 334 ~~~~ 337 (805)
.++.
T Consensus 202 f~~~ 205 (498)
T COG3104 202 FLLG 205 (498)
T ss_pred HHHc
Confidence 6655
No 120
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.38 E-value=5.4e-12 Score=118.51 Aligned_cols=133 Identities=23% Similarity=0.365 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-
Q psy10046 204 GSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE- 282 (805)
Q Consensus 204 ~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p- 282 (805)
.+.+.++..++.+++|++.||+|||+.++++.++..++.++..++++++.+++ .+++.|++.+...+....++.+.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLII-ARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHH-HHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 45567888999999999999999999999999999999998888899888866 6899999999989999899999887
Q ss_pred cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 283 KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 283 ~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
++|++++++......+|..++|.+++.+.+..+|++.|++.+++.++..+..+++
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence 6799999999999999999999999999999999999998887777666665554
No 121
>KOG3626|consensus
Probab=99.35 E-value=1.9e-11 Score=142.06 Aligned_cols=155 Identities=18% Similarity=0.148 Sum_probs=128.6
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc--------------
Q psy10046 183 GLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS-------------- 248 (805)
Q Consensus 183 ~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a-------------- 248 (805)
...+..+.+.|+++..+.|++.+.|-++..+...+..++.-|.-|-+++-+++++.+++++++++-
T Consensus 117 ~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 117 NSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 344578889999999999999999999999999999999999999999999999999999998763
Q ss_pred ------C-------------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHH
Q psy10046 249 ------R-------------------------------TIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACS 290 (805)
Q Consensus 249 ------~-------------------------------~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~g 290 (805)
+ .++.++++..++.|+|....++.+..++-+... ++-+..+|
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlg 276 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLG 276 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHH
Confidence 0 034344556899999999999999999998886 77999999
Q ss_pred HHHHHhhHHHhhHHHHHHHHhhcc------------------c-hHHHHHHHHHHHHHHHHHHHhc
Q psy10046 291 LGSTGTGFGTTVYAPITSYLISEY------------------G-WRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 291 i~~~~~~lG~~lgp~i~~~l~~~~------------------g-Wr~~f~i~~~~~~~~~i~~~~~ 337 (805)
++.....+|+++|-++++++...+ | |+.-|++.+++.++..+.++++
T Consensus 277 i~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~f 342 (735)
T KOG3626|consen 277 ILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFF 342 (735)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999887521 2 6666777777777666666554
No 122
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.32 E-value=1.7e-10 Score=128.09 Aligned_cols=149 Identities=11% Similarity=0.168 Sum_probs=124.9
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Q psy10046 188 EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLA 267 (805)
Q Consensus 188 ~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g 267 (805)
.+.+++|.+..+.+++.+...+...++.++.|++.||+|||+++.++.++..++.++..+.++.+.+++ .+++.|++.+
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g 303 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLM-LQLLNAIFIG 303 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 445778999999999888887788888999999999999999988887776666666666677776645 5788899888
Q ss_pred HHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 268 LSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 268 ~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
...+....++.+..|++++.+++++.....+|..++|.+++.+.+..||++.|++.+++.++..++..+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 304 ILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 8888888888888898888999999999999999999999999999999999999887776666655443
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.30 E-value=1.2e-10 Score=132.16 Aligned_cols=155 Identities=17% Similarity=0.263 Sum_probs=124.8
Q ss_pred HHHHHHHHHhCCCh--------hHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC-c---H
Q psy10046 184 LLYIEFLNEFGASK--------SKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR-T---I 251 (805)
Q Consensus 184 ~~~p~i~~~~g~s~--------~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~-~---~ 251 (805)
.+.+.+.+++|.+. ...+...++..++..++.++.|+++||+|+|++++++.++.+++.++..... + +
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 34455566666443 5678899999999999999999999999999999999999988877666642 2 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHH-HHhhHHHhhHHHHHHHHhhc------cchHHHHHHH
Q psy10046 252 EHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGS-TGTGFGTTVYAPITSYLISE------YGWRGTVLLL 323 (805)
Q Consensus 252 ~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~-~~~~lG~~lgp~i~~~l~~~------~gWr~~f~i~ 323 (805)
+.+++ .+++.|++.+...+....++.+++| ++|++++|+.+ ....+|.++||+++|++.++ +||++.|++.
T Consensus 309 ~~l~l-~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~ 387 (418)
T TIGR00889 309 ALLFL-SMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFF 387 (418)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 34434 5789999998888888888899998 67999999997 67889999999999999987 4699999988
Q ss_pred HHHHHHHHHHHHhccC
Q psy10046 324 SGTFFNLCVCGAIMRD 339 (805)
Q Consensus 324 ~~~~~~~~i~~~~~~~ 339 (805)
+++.++++++.+++.+
T Consensus 388 ~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 388 AGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 8877776666655543
No 124
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.29 E-value=9.9e-11 Score=132.92 Aligned_cols=145 Identities=16% Similarity=0.251 Sum_probs=122.5
Q ss_pred HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Q psy10046 192 EFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYV 271 (805)
Q Consensus 192 ~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~ 271 (805)
+.+.+..+++++.++..++..++.+++|+++||+|+|+.+.++.++.+++.++.+++++.+.+++ ++++.|++.+...+
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~-~~~l~g~~~~~~~~ 334 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSI-LKLLHAFEVPFLLV 334 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHH-HHHHHHHHHHHHHH
Confidence 34667778899999999999999999999999999999999999999999888999999888755 68999998888777
Q ss_pred HHHHHHhhhcc-cchhHHHHH-HHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 272 TAVVSIAFWFE-KKRGLACSL-GSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 272 ~~~~~l~~~~p-~~rg~a~gi-~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
....++.+.+| +.++...++ ++.+..+|.+++|+++|++.+..||+..|++.+++.++..++.++.
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Confidence 77788887777 557766555 5677889999999999999999999999999888776665555443
No 125
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.29 E-value=6.8e-11 Score=130.71 Aligned_cols=146 Identities=16% Similarity=0.093 Sum_probs=122.3
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHH-HHHHHHHHHH
Q psy10046 185 LYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEH-MYLTFGLLAG 263 (805)
Q Consensus 185 ~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~-l~i~~R~l~G 263 (805)
..+.+.+++|.+..+.++..+++.++..++.+++|+++||+|||+.+.++.++.+++.++..+.++... +++...++.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 306 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVF 306 (377)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHH
Confidence 345566789999989999999999999999999999999999999999999888888887777664322 2223457788
Q ss_pred HHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHH
Q psy10046 264 IGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 264 ~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~ 330 (805)
++.+...+....++.+.+| ++|++++|++.....+|..++|++.+.+.++.||++.|++.+++.++.
T Consensus 307 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 307 FTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 8888777777778888887 779999999999999999999999999999999999999877665554
No 126
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.29 E-value=3e-10 Score=136.08 Aligned_cols=134 Identities=13% Similarity=0.039 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy10046 202 WIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWF 281 (805)
Q Consensus 202 l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~ 281 (805)
+...+..++..++.++.|+++||+|||+++++++++.++++++.+++++...+++ ++++.|++.++.++...+++++++
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~-~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIA-LLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3455667889999999999999999999999999999999999999888777755 578889888888888999999999
Q ss_pred c-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 282 E-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 282 p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
| +.|++++|+..++..+|.++||++++.+... +...+|++.+++.++.+++.+++
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L 733 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKL 733 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC
Confidence 9 6799999999999999999999999988764 45667777777666655555544
No 127
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.29 E-value=2.3e-10 Score=124.98 Aligned_cols=154 Identities=18% Similarity=0.281 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHh-CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChH-HHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q psy10046 182 FGLLYIEFLNEF-GASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRS-MTIVAGIISGVGFVLSCFSRTIEHMYLTFG 259 (805)
Q Consensus 182 ~~~~~p~i~~~~-g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~-vlii~~~l~~i~~i~~a~a~~~~~l~i~~R 259 (805)
+....+.+.++. |.+..+.++..+...++..++.++++++.||+|||+ .+.++.++..++.++..+.++.+.+++ ..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~ 272 (352)
T cd06174 194 LLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLV-AL 272 (352)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHH-HH
Confidence 344456666554 999999999999999999999999999999999999 999999999999999999888877766 57
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHh
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
++.|++.+...+....++.+..| ++|++.+++......+|..+++.+.+.+.+..||++.|++.+++.++..++.++
T Consensus 273 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 273 LLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 99999999999999999998888 789999999999999999999999999999999999999998888777666544
No 128
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.26 E-value=4e-10 Score=129.89 Aligned_cols=156 Identities=15% Similarity=0.031 Sum_probs=114.8
Q ss_pred HHHHHHHH-HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH--HHHhcCcHHHHHHH
Q psy10046 181 SFGLLYIE-FLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFV--LSCFSRTIEHMYLT 257 (805)
Q Consensus 181 ~~~~~~p~-i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i--~~a~a~~~~~l~i~ 257 (805)
......|. +.+++|++..+.++..+++.++..++.+++|+++||+|||+.+++...+..++.. +.....+...+++
T Consensus 276 ~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 354 (467)
T PRK09556 276 GIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLA- 354 (467)
T ss_pred HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHH-
Confidence 34444564 4567999999999999999999999999999999999999877665544443332 2233455555534
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhH-HHhhHHHHHHHHhh------------ccchHHHHHHH
Q psy10046 258 FGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGF-GTTVYAPITSYLIS------------EYGWRGTVLLL 323 (805)
Q Consensus 258 ~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~l-G~~lgp~i~~~l~~------------~~gWr~~f~i~ 323 (805)
++++.|++..+..........+++| +.||.+.|+......+ |.+++|.+.|++.+ ..||+..|++.
T Consensus 355 ~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~ 434 (467)
T PRK09556 355 SLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAAL 434 (467)
T ss_pred HHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHH
Confidence 4677776544433333455568888 5799999999888776 77999999999999 67899999988
Q ss_pred HHHHHHHHHHHHhc
Q psy10046 324 SGTFFNLCVCGAIM 337 (805)
Q Consensus 324 ~~~~~~~~i~~~~~ 337 (805)
++..++.+++.+++
T Consensus 435 ~~~~~~~~~~~~~~ 448 (467)
T PRK09556 435 DIAAIGCICLMAIV 448 (467)
T ss_pred HHHHHHHHHHHHHH
Confidence 77766665555543
No 129
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.25 E-value=7.7e-10 Score=124.53 Aligned_cols=151 Identities=15% Similarity=0.141 Sum_probs=125.0
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q psy10046 185 LYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGI 264 (805)
Q Consensus 185 ~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~ 264 (805)
+++.+..+.|.+ ..++..+.+.++..++.+++|++.||+|+|+.+.++.++.+++.++.++.++.+.+++ ..++.|+
T Consensus 238 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~ 314 (399)
T PRK05122 238 FITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALI-GAALTGF 314 (399)
T ss_pred HHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHH-HHHHHHH
Confidence 344455566653 4567778889999999999999999999999999998888888888888888877755 5789999
Q ss_pred HHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhcc
Q psy10046 265 GLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIMR 338 (805)
Q Consensus 265 g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~~ 338 (805)
+.+..++.....+.+..| ++||++++++.....+|..+++++.|++.+..||++.|++.+++.++.+++.+++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 315 GFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999888777777777776 77999999999999999999999999999999999999998877777666655543
No 130
>PRK12382 putative transporter; Provisional
Probab=99.24 E-value=6.9e-10 Score=124.64 Aligned_cols=151 Identities=16% Similarity=0.165 Sum_probs=125.6
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Q psy10046 184 LLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAG 263 (805)
Q Consensus 184 ~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G 263 (805)
.+.+.+.++.+.+. .++..+.+.++..++.+++|++.||+|+|+.+.++.++.+++.++..+.++.+.+++ +.++.|
T Consensus 237 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g 313 (392)
T PRK12382 237 TFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALA-GAALTG 313 (392)
T ss_pred HHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHH-HHHHHH
Confidence 33445556667653 456677788888999999999999999999999999988888888888888877655 578999
Q ss_pred HHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 264 IGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 264 ~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
++.+...+...+.+.+.+| ++||++++++.....+|..++|++.+++.++.||++.|++.+++.++..++.++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 314 AGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 9988888877777777665 7899999999999999999999999999999999999999888777766666544
No 131
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.24 E-value=7.8e-10 Score=124.90 Aligned_cols=156 Identities=18% Similarity=0.242 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHH-HHHHHHHHHHHHHHh-----cCcHHH
Q psy10046 180 FSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTI-VAGIISGVGFVLSCF-----SRTIEH 253 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vli-i~~~l~~i~~i~~a~-----a~~~~~ 253 (805)
+....+.|.+.+++|.+..+.+++.+++.++..++.+++|+++||+|||+.+. .+.+..+++.++..+ .++.+.
T Consensus 239 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ 318 (402)
T TIGR00897 239 FGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAV 318 (402)
T ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHH
Confidence 34445667788889999999999999999999999999999999999888764 333333333333221 245555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q psy10046 254 MYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 254 l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~ 333 (805)
+++ +.++.|++.+...+ ....+.+..|++||+++|+.+....+|..++|++++.+.+..||+..|++.+++.++..++
T Consensus 319 ~~~-~~~~~G~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~ 396 (402)
T TIGR00897 319 ALI-IAIALGIFLAGYVP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFL 396 (402)
T ss_pred HHH-HHHHHHHHHHHHHH-HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 544 46788888776544 3455667778899999999999999999999999999999999999999998887777766
Q ss_pred HHhc
Q psy10046 334 GAIM 337 (805)
Q Consensus 334 ~~~~ 337 (805)
.++.
T Consensus 397 ~~~~ 400 (402)
T TIGR00897 397 TAFI 400 (402)
T ss_pred HHHh
Confidence 6654
No 132
>PRK03699 putative transporter; Provisional
Probab=99.24 E-value=1e-09 Score=123.47 Aligned_cols=153 Identities=18% Similarity=0.094 Sum_probs=125.8
Q ss_pred HHHHHHHHH-HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Q psy10046 182 FGLLYIEFL-NEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGL 260 (805)
Q Consensus 182 ~~~~~p~i~-~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~ 260 (805)
+....|.+. +.+|++..+.+++.+++.++..++.+++|+++||+|+|++++...++.++..++..+.++...+.+ ..+
T Consensus 224 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 302 (394)
T PRK03699 224 FISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLY-AIL 302 (394)
T ss_pred HHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHH-HHH
Confidence 334455555 678999999999999999999999999999999999999988888777777777767777766645 457
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q psy10046 261 LAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGA 335 (805)
Q Consensus 261 l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~ 335 (805)
+.|++.+..++...++..+..|++++...++...+..+|..++|.+.|++.+..||+..+++.+++.+++.++..
T Consensus 303 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (394)
T PRK03699 303 GLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCI 377 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHH
Confidence 888888877777777777777777788888888889999999999999999999999999988877666655433
No 133
>PRK03545 putative arabinose transporter; Provisional
Probab=99.24 E-value=8e-10 Score=124.14 Aligned_cols=151 Identities=12% Similarity=0.026 Sum_probs=120.0
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Q psy10046 186 YIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIG 265 (805)
Q Consensus 186 ~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g 265 (805)
.+.+.+.+|.+...++++.+++.++..++.++.|+++||+|||.+++...++.....++..+.++.+.+++ +.++.|++
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~g~~ 307 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSV-LSIFWGIA 307 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHH-HHHHHHHH
Confidence 34556668999999999999999999999999999999999887544443333333333455667766645 56888888
Q ss_pred HHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 266 LALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 266 ~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
.+...+.....+.+..|++|++++|++.....+|..+||+++|++.+++|++..|++.+++.++.++..++.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 308 IMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 776666666777777888899999999999999999999999999999999999999988777766666554
No 134
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.23 E-value=2.8e-10 Score=118.54 Aligned_cols=176 Identities=16% Similarity=0.239 Sum_probs=136.0
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q psy10046 161 GWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGV 240 (805)
Q Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i 240 (805)
||..+++..+++. ..|..+.++.+-|.+++.+|+++.+.+.+.+...+|..+| ++.|.+.|++|++.++++|.+...+
T Consensus 1 rW~~l~a~~~v~~-~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQL-CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHH-hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHH
Confidence 5787777777765 5578899999999999999999999999999999999874 8899999999999999999999999
Q ss_pred HHHHHHhc-------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhc
Q psy10046 241 GFVLSCFS-------RTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISE 313 (805)
Q Consensus 241 ~~i~~a~a-------~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~ 313 (805)
|..+..++ .++|.+.+ +-++.|.+.+...........+.||++||.+.|+.-...+++..+...+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~-~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCL-FLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHH-HHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 88876553 35566644 45676666655555655666688899999999999999999999988888877765
Q ss_pred cchHHHHHHHHH-HHHHHHHHHHhccCC
Q psy10046 314 YGWRGTVLLLSG-TFFNLCVCGAIMRDP 340 (805)
Q Consensus 314 ~gWr~~f~i~~~-~~~~~~i~~~~~~~p 340 (805)
-.-.. +++.++ ..++.++..++.++.
T Consensus 158 ~~~~f-ll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 158 DPSSF-LLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred ChHHH-HHHHHHHHHHHHHHHhhheecc
Confidence 33333 334443 344445555565554
No 135
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.21 E-value=1.1e-09 Score=122.81 Aligned_cols=148 Identities=11% Similarity=0.120 Sum_probs=128.4
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q psy10046 185 LYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGI 264 (805)
Q Consensus 185 ~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~ 264 (805)
+.|.+.+++|.+..+++++.++..++..++.++++++.||+|.|+.+.++.++.++..++.+++++.+.+++ ..++.|+
T Consensus 227 ~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~q~l~g~ 305 (382)
T TIGR00902 227 FSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFL-LQILHCG 305 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHH-HHHHHHH
Confidence 445566789999999999999999999999999999999999999999999999999999999999988866 5899999
Q ss_pred HHHHHHHHHHHHHhhhcccchhHHHHHHH-HHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Q psy10046 265 GLALSYVTAVVSIAFWFEKKRGLACSLGS-TGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCG 334 (805)
Q Consensus 265 g~g~~~~~~~~~l~~~~p~~rg~a~gi~~-~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~ 334 (805)
+.+...+....++.+..+++|+.+.+++. ...++|.++|+.++|++.+++|+ ..|++.+++.++.+++.
T Consensus 306 ~~~~~~~~~~~~i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 306 TFAVCHLAAMRYIAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 99999999999999773367899999986 57889999999999999999996 66777777666554443
No 136
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.20 E-value=3.3e-10 Score=131.35 Aligned_cols=148 Identities=11% Similarity=0.009 Sum_probs=113.0
Q ss_pred HHHHHHHHH-HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc--CcHHHHHHHH
Q psy10046 182 FGLLYIEFL-NEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS--RTIEHMYLTF 258 (805)
Q Consensus 182 ~~~~~p~i~-~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a--~~~~~l~i~~ 258 (805)
...++|.+. +++|.+..+++++.+.+.++..++.+++|+++||+|||++++++.++..++.++.... .+.+.+.+ .
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 372 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGL-L 372 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHH-H
Confidence 344566666 5899999999999999999999999999999999999999888877766665544433 23333322 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHH
Q psy10046 259 GLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 259 R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~ 330 (805)
.++.|+...+..+....++.+.+| ++||++++++.....+|..+||+++|.+.+..||++.+++.++...+.
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~ 445 (496)
T PRK03893 373 LFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFV 445 (496)
T ss_pred HHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHH
Confidence 344444433444556667778887 679999999999999999999999999999999999887666544333
No 137
>KOG2325|consensus
Probab=99.19 E-value=2.5e-10 Score=128.09 Aligned_cols=174 Identities=15% Similarity=0.112 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHH-HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-hHHHHHHHHH
Q psy10046 161 GWMVVLAAFFINMAGDGIAFSFG-LLYIEFLN-EFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGC-RSMTIVAGII 237 (805)
Q Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~-~~~p~i~~-~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Gr-r~vlii~~~l 237 (805)
+|..+.++.+.+++.......+. ..-|++++ |.+.+.+..||+.++..++.+++.+++|..+.|.|. |+.++++.++
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii 111 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLI 111 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHH
Confidence 35555555555554332222222 22344444 477788889999999999999999999999999996 8889999999
Q ss_pred HHHHHHHH-Hh---cC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchhHHHHHHHHHhhHHHhhHHHHHHHHh
Q psy10046 238 SGVGFVLS-CF---SR-TIEHMYLTFGLLAGIGLALSYVTAVVSIAF-WFEKKRGLACSLGSTGTGFGTTVYAPITSYLI 311 (805)
Q Consensus 238 ~~i~~i~~-a~---a~-~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~-~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~ 311 (805)
..+++++. ++ .+ ..+.+ +..|++.|+|.|. ....-++++. ..+++|.++++....+..+|.++||.++.++.
T Consensus 112 ~~~g~llY~~l~~~~~~~~y~m-L~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 112 AIIGNLLYLALAYVPNGVKYLM-LVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHHhcccchHHHH-HHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 99999887 33 23 34444 4479999999776 4555667774 45688999999998888888888888887665
Q ss_pred hc--cc-----------hHHHHHHHHHHHHHHHHHHHh
Q psy10046 312 SE--YG-----------WRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 312 ~~--~g-----------Wr~~f~i~~~~~~~~~i~~~~ 336 (805)
.- .| +..+-|+.+++.++.+++.++
T Consensus 190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~ 227 (488)
T KOG2325|consen 190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILF 227 (488)
T ss_pred hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHh
Confidence 31 12 224556666666665555544
No 138
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.18 E-value=1.6e-09 Score=122.05 Aligned_cols=154 Identities=12% Similarity=0.077 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q psy10046 182 FGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLL 261 (805)
Q Consensus 182 ~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l 261 (805)
.....|.+.++.|.+..+.+++.+++.++..++.++.|+++||+|||+.+.++.++.+++.++..+.++.+.+++ ..++
T Consensus 239 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 317 (406)
T PRK11551 239 LLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLL-AGFA 317 (406)
T ss_pred HHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH-HHHH
Confidence 334467788889999999999999999999999999999999999999988877777777777777777776655 4578
Q ss_pred HHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc-chHHHHHHHHHHHHHHHHHHHh
Q psy10046 262 AGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEY-GWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 262 ~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~-gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
.|++.++..+...+++.+.+| ++|++++|+......+|.++||+++|++.++. +|...+++.+...++.+++.++
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 318 AGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 888887778888888888887 77999999999999999999999999999875 4556666555555544444443
No 139
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.18 E-value=8.4e-10 Score=124.26 Aligned_cols=136 Identities=17% Similarity=0.182 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10046 200 TAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAF 279 (805)
Q Consensus 200 ~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~ 279 (805)
.+.+.+++.++..++.+++|+++||+|||+.+.++.++.+++.++.++.++.+.+++ .+++.|++.+...+.....+.+
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~ 338 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGI-LRFLLGAADGALLPAVQTLLVY 338 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHH-HHHHHHhhhHhhHHHHHHHHHH
Confidence 456667777888899999999999999999999998888888887777788777755 5789999999888888888776
Q ss_pred hcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHh
Q psy10046 280 WFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 280 ~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
..+ +++|+.+++......+|..+||+++|++.+..||++.|++.+++.++..++.++
T Consensus 339 ~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 339 NSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred hCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 666 679999999999999999999999999999999999999998877776666554
No 140
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.17 E-value=1e-09 Score=126.00 Aligned_cols=148 Identities=9% Similarity=0.136 Sum_probs=119.4
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh--CChHHHHH--HHHHHHHHHHHHHhcCcHHHHHHHHH
Q psy10046 184 LLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKF--GCRSMTIV--AGIISGVGFVLSCFSRTIEHMYLTFG 259 (805)
Q Consensus 184 ~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~--Grr~vlii--~~~l~~i~~i~~a~a~~~~~l~i~~R 259 (805)
.+++.+.+++|.+..+++++.+++.++..++.++.|+++||. ++|+..++ ++++.+++.+++.+.++++.+++ ++
T Consensus 262 ~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i-~~ 340 (455)
T TIGR00892 262 IFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVI-YC 340 (455)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH-HH
Confidence 344666678999999999999999999999999999999973 34433333 33444555566677888887755 58
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc-chHHHHHHHHHHHHHHHH
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEY-GWRGTVLLLSGTFFNLCV 332 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~-gWr~~f~i~~~~~~~~~i 332 (805)
++.|++.+...+...+++.+.+| ++++++++++..+..+|.++||+++|++.+.. +|++.|++.+++.++.++
T Consensus 341 ~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 341 IFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999999888888888888776 67999999999999999999999999999877 599999998876665544
No 141
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.16 E-value=1.6e-09 Score=122.87 Aligned_cols=155 Identities=11% Similarity=-0.052 Sum_probs=129.3
Q ss_pred HHHHHHHHHHH-hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Q psy10046 182 FGLLYIEFLNE-FGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGL 260 (805)
Q Consensus 182 ~~~~~p~i~~~-~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~ 260 (805)
+....|.+.++ +|.+....+++.+.+.++..++.++.+++.||.++++.+.++.++.+++.++.++.++.+.+++ +.+
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 320 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVL-CLA 320 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHH-HHH
Confidence 33445666666 8999999999999999999999999999999988888888888888888888888888776645 468
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 261 LAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 261 l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
+.|++.+...+...+++.+..| +.||+++|++.....+|..+||.+.|++.+.+|++..+++.+++.+++.++.++.
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 8888888777777788888887 5699999999999999999999999999999999999988887666655555444
No 142
>KOG2816|consensus
Probab=99.15 E-value=2.2e-09 Score=121.91 Aligned_cols=127 Identities=14% Similarity=0.177 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH--HHHHHHHHHHHHhhhcc-cc
Q psy10046 208 MAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIG--LALSYVTAVVSIAFWFE-KK 284 (805)
Q Consensus 208 ~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g--~g~~~~~~~~~l~~~~p-~~ 284 (805)
.+...+..++.|.++|++|||..+.+.++...+..++..+.. +++++ +.|+. .+.......+++++... ++
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~ 145 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEE 145 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh----hcccccchhhhhhhhhhheeeccchhH
Confidence 577788899999999999999999999988888877766655 33312 33332 33456777788887765 77
Q ss_pred hhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhccCC
Q psy10046 285 RGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIMRDP 340 (805)
Q Consensus 285 rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~~~p 340 (805)
|...+|+.......+.+++|.+++.+....|.-.+|++..+..++..+..+++.+.
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~E 201 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPE 201 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccc
Confidence 99999999999999999999999999999999999999888887777777666443
No 143
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.14 E-value=1e-09 Score=125.40 Aligned_cols=157 Identities=11% Similarity=0.074 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-----cC------c
Q psy10046 182 FGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCF-----SR------T 250 (805)
Q Consensus 182 ~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~-----a~------~ 250 (805)
...+.|.+.+++|.+....++...++.++..++.+++|+++||+|||+.+.+++++.+++.++.++ .. +
T Consensus 303 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (481)
T TIGR00879 303 IMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSG 382 (481)
T ss_pred hHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchh
Confidence 444567888899999988899999999999999999999999999999999988887777666652 11 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHH
Q psy10046 251 IEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFN 329 (805)
Q Consensus 251 ~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~ 329 (805)
...+.+ +.++.++...+..+....++.+.+| ++|+.++++......+|.+++|.+.+++.++.||++.|++.++++++
T Consensus 383 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~ 461 (481)
T TIGR00879 383 NVAIVF-ILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVL 461 (481)
T ss_pred HHHHHH-HHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHH
Confidence 222222 2222222222233555566678887 67999999999999999999999999999999999999998888777
Q ss_pred HHHHHHhccC
Q psy10046 330 LCVCGAIMRD 339 (805)
Q Consensus 330 ~~i~~~~~~~ 339 (805)
.+++.+++.+
T Consensus 462 ~~i~~~~~~~ 471 (481)
T TIGR00879 462 GLIFVYFFLP 471 (481)
T ss_pred HHHHHheecc
Confidence 7777665543
No 144
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.14 E-value=9.2e-08 Score=105.79 Aligned_cols=153 Identities=11% Similarity=0.045 Sum_probs=111.0
Q ss_pred HHHHHHHHH-hCCChhHHH-HHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q psy10046 184 LLYIEFLNE-FGASKSKTA-WIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLL 261 (805)
Q Consensus 184 ~~~p~i~~~-~g~s~~~~~-l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l 261 (805)
.+.|++.+. .|++..++. -+.-+..-.+.+..++...+.|.+|.|++++++.+...+..++.-+.++...+-+ .-++
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~-~q~~ 103 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQL-MQFF 103 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHH-HHHH
Confidence 345666664 788887765 4555555667778888999999999999999999999999999999999998866 5788
Q ss_pred HHHHHHHHHHHHHHHHhhhc-ccchhHHHHHHHHHhhHHHhhHHHHHHHHhhc--cchHHHHHHHHHHHHHHHHHHHhcc
Q psy10046 262 AGIGLALSYVTAVVSIAFWF-EKKRGLACSLGSTGTGFGTTVYAPITSYLISE--YGWRGTVLLLSGTFFNLCVCGAIMR 338 (805)
Q Consensus 262 ~G~g~g~~~~~~~~~l~~~~-p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~--~gWr~~f~i~~~~~~~~~i~~~~~~ 338 (805)
.|++.+. ..+..+++-... +++-.++.+...++..+|-.++.++|..++.. ...+...++......+.+++.+++.
T Consensus 104 yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 104 YGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8887765 444445554333 46667778888888888888888888877763 3455565655554445555544443
No 145
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.13 E-value=5.6e-09 Score=116.92 Aligned_cols=148 Identities=14% Similarity=0.066 Sum_probs=119.3
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q psy10046 185 LYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGI 264 (805)
Q Consensus 185 ~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~ 264 (805)
++|.+.++.|.+...+++..+++.++..++.++.|+++||+|+|+++.++.++.+++.+... .. ..++. ..++.|+
T Consensus 222 ~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~-~~~l~g~ 297 (381)
T PRK03633 222 LMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQ-AAMAP-ALFILGA 297 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hh-HHHHH-HHHHHHH
Confidence 35777778899999999999999999999999999999999999999888887777665443 22 22223 3577788
Q ss_pred HHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHh
Q psy10046 265 GLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 265 g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
+.+...+...+.+.+..| ++++.+.+.+..+..+|.++||.++|++.+++||++.|++.+++.++..++.+.
T Consensus 298 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 298 AGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 777778888888887776 567778888888899999999999999999999999999988777666555444
No 146
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.12 E-value=7.2e-09 Score=116.68 Aligned_cols=157 Identities=13% Similarity=0.054 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHH
Q psy10046 181 SFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR-TIEHMYLTFG 259 (805)
Q Consensus 181 ~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~-~~~~l~i~~R 259 (805)
......|.+.+++|.+..++++..+++.++..++.+++|++.||+|||+.++++.++..++.++....+ +...+ + -
T Consensus 223 ~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~--~ 299 (393)
T PRK09705 223 SLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL-W--A 299 (393)
T ss_pred HHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH-H--H
Confidence 333445666677999999999999999999999999999999999999999888887777766554333 32222 2 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc-c-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHHHHh
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWF-E-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG-WRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~-p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g-Wr~~f~i~~~~~~~~~i~~~~ 336 (805)
++.|++.+...+.......+.. | +++++++++......++..++|++.|++.+..| |...|++.++..++..++.++
T Consensus 300 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK09705 300 MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLR 379 (393)
T ss_pred HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 4567887777776665555554 4 569999999999999999999999999999876 777777776666665555555
Q ss_pred ccCC
Q psy10046 337 MRDP 340 (805)
Q Consensus 337 ~~~p 340 (805)
+.++
T Consensus 380 ~~~~ 383 (393)
T PRK09705 380 FAPA 383 (393)
T ss_pred hccc
Confidence 5443
No 147
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.11 E-value=2.7e-08 Score=107.20 Aligned_cols=146 Identities=14% Similarity=0.144 Sum_probs=107.9
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Q psy10046 188 EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLA 267 (805)
Q Consensus 188 ~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g 267 (805)
.+.+++|++..+++.+....++..++..++.|.++||+|||+.-++.++++++.++ +-..+++..+++ .|++.|++.+
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~-GRvlgGiaTS 136 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLL-GRVLGGIATS 136 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHH-HHHHHHHHHH
Confidence 45578999999999999999999999999999999999999999999999999986 455688999877 5999999999
Q ss_pred HHHHHHHHHHh-hhcccc-----hhHHHHHHH-HHhhHHHhhHHHHHHHHhhccch--HHHHHHHHHHHHHHHHHHH
Q psy10046 268 LSYVTAVVSIA-FWFEKK-----RGLACSLGS-TGTGFGTTVYAPITSYLISEYGW--RGTVLLLSGTFFNLCVCGA 335 (805)
Q Consensus 268 ~~~~~~~~~l~-~~~p~~-----rg~a~gi~~-~~~~lG~~lgp~i~~~l~~~~gW--r~~f~i~~~~~~~~~i~~~ 335 (805)
..+.+--+++. |+..+. .+.-++... ...++-.+++.+++.++++..|. .++|.....+.++..+++.
T Consensus 137 LLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 137 LLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 99988888876 664321 222222222 22333345555666666665554 7778776666555555443
No 148
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.11 E-value=4.7e-09 Score=116.42 Aligned_cols=152 Identities=13% Similarity=0.089 Sum_probs=108.5
Q ss_pred HHHHHH-HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChH--HHH------HHHHHHHHHHHHHHhcCcHHH
Q psy10046 183 GLLYIE-FLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRS--MTI------VAGIISGVGFVLSCFSRTIEH 253 (805)
Q Consensus 183 ~~~~p~-i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~--vli------i~~~l~~i~~i~~a~a~~~~~ 253 (805)
....|. +.+.+|.+..+.+++.+++.++..++.+++|+++||+|||+ ... ++.++.++..+.....++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (399)
T TIGR00893 235 LTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYA 314 (399)
T ss_pred HHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 333444 45668999999999999999999999999999999999985 111 111111111122222233333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc-hHHHHHHHHHHHHHHH
Q psy10046 254 MYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG-WRGTVLLLSGTFFNLC 331 (805)
Q Consensus 254 l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g-Wr~~f~i~~~~~~~~~ 331 (805)
. +..-++ +++..+..+...+++.+.+| ++|++++++......+|..++|.+.+++.+..| |++.|++.+++.++..
T Consensus 315 ~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 392 (399)
T TIGR00893 315 A-LALVAL-GFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGA 392 (399)
T ss_pred H-HHHHHH-HHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHH
Confidence 3 322233 33333367888888888887 679999999999999999999999999999988 9999998887776665
Q ss_pred HHHHh
Q psy10046 332 VCGAI 336 (805)
Q Consensus 332 i~~~~ 336 (805)
+..++
T Consensus 393 ~~~~~ 397 (399)
T TIGR00893 393 LSYLL 397 (399)
T ss_pred HHHHH
Confidence 55443
No 149
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.11 E-value=1.8e-09 Score=120.22 Aligned_cols=148 Identities=14% Similarity=0.174 Sum_probs=112.3
Q ss_pred HHHHHHHHHHH-HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHH--HHHHh--cCcHHHH
Q psy10046 180 FSFGLLYIEFL-NEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGF--VLSCF--SRTIEHM 254 (805)
Q Consensus 180 ~~~~~~~p~i~-~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~--i~~a~--a~~~~~l 254 (805)
.....+.|.+. +++|.+..+.++..+++.++..++.+++|+++||+|||+.++++.++..+.. ++..+ ..+.+.+
T Consensus 236 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (394)
T TIGR00883 236 YLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLF 315 (394)
T ss_pred HHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 33444455555 6789999999999999999999999999999999999998775554443332 22222 2455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHH-HHHhhHHHhhHHHHHHHHhhccc-hHHHHHHHHHHHH
Q psy10046 255 YLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLG-STGTGFGTTVYAPITSYLISEYG-WRGTVLLLSGTFF 328 (805)
Q Consensus 255 ~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~-~~~~~lG~~lgp~i~~~l~~~~g-Wr~~f~i~~~~~~ 328 (805)
++ ..++.|++.+...+...+++.+.+| ++|++++++. ..+..+|..++|+++|++.++.| |++.+++.++..+
T Consensus 316 ~~-~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 316 FF-LVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HH-HHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 44 4678888888888888899999988 5699999884 56667899999999999999988 8888776655443
No 150
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.10 E-value=2.4e-09 Score=121.94 Aligned_cols=153 Identities=16% Similarity=0.205 Sum_probs=118.8
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh---C--ChHHHHHHHHHHHHHHHHHHhcC----cHHH
Q psy10046 183 GLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKF---G--CRSMTIVAGIISGVGFVLSCFSR----TIEH 253 (805)
Q Consensus 183 ~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~---G--rr~vlii~~~l~~i~~i~~a~a~----~~~~ 253 (805)
....+.+.+++|+++.+.....++..+.+.+ -+++|.++|-+ | ||+.++++.++.+++.+..++.+ +...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 3456788999999999999999999988887 67799999964 4 44556667666656555555433 3444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHH
Q psy10046 254 MYLTFGLLAGIGLALSYVTAVVSIAFWF---EKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 254 l~i~~R~l~G~g~g~~~~~~~~~l~~~~---p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~ 330 (805)
..+ +-++..+|.+.....+-+.+.|.. |+.+|...+.......+|.+++..++|.+.+..++++.|++.+++.++.
T Consensus 89 ~~~-~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 89 AVV-LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred HHH-HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 433 457788888888998888888776 3448888999999999999999999999999999999999888777766
Q ss_pred HHHHHhc
Q psy10046 331 CVCGAIM 337 (805)
Q Consensus 331 ~i~~~~~ 337 (805)
++..+++
T Consensus 168 ~~~~~~~ 174 (433)
T PF03092_consen 168 LIVALFL 174 (433)
T ss_pred HHHHHHh
Confidence 6555554
No 151
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.10 E-value=1e-08 Score=111.59 Aligned_cols=152 Identities=11% Similarity=0.057 Sum_probs=118.0
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHH---hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy10046 170 FINMAGDGIAFSFGLLYIEFLNE---FGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSC 246 (805)
Q Consensus 170 ~~~~~~~~~~~~~~~~~p~i~~~---~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a 246 (805)
+..++..+...+.....+.+..+ +|++..+.++..+.+.+++.+|.++.+++.||+|+|+.+.++.++.+++.++..
T Consensus 147 ~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~ 226 (310)
T TIGR01272 147 LGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAA 226 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444444455543 699999999999999999999999999999999999998888888888777666
Q ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHH
Q psy10046 247 FSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLS 324 (805)
Q Consensus 247 ~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~ 324 (805)
..++...+ ++ -++.|++.+..+|...+...+.+|++.+.+.++. ....+|.+++|++.|.+.+..|.++.|++..
T Consensus 227 ~~~~~~~~-~~-~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 227 LTHGYVAM-WF-VLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HcCCHHHH-HH-HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 66655444 32 3578999999999999888888887767777775 4566899999999999999999998887543
No 152
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.09 E-value=8.2e-09 Score=115.70 Aligned_cols=143 Identities=14% Similarity=0.150 Sum_probs=119.9
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Q psy10046 186 YIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIG 265 (805)
Q Consensus 186 ~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g 265 (805)
.|.+.++.|.+...++++.++..++..++.++.|++.||+|+|+.+.++.++.+++.++.+++++.+.+++ ..++.|++
T Consensus 228 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~ 306 (382)
T PRK11128 228 SAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIV-IQILHCGT 306 (382)
T ss_pred HHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHH
Confidence 34555779999999999999999999999999999999999999999999999988888888899888756 57999999
Q ss_pred HHHHHHHHHHHHhhhcccchhHHHHHHH-HHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHH
Q psy10046 266 LALSYVTAVVSIAFWFEKKRGLACSLGS-TGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 266 ~g~~~~~~~~~l~~~~p~~rg~a~gi~~-~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~ 330 (805)
.+...+....++.+..+.+++++.+++. ....+|..+||.++|.+.+.+|+ ..|++.+++.++.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 307 FTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 9988888888887766677788888886 55678889999999999999997 4666666555443
No 153
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.06 E-value=1e-08 Score=112.85 Aligned_cols=161 Identities=14% Similarity=0.132 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHH
Q psy10046 176 DGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMY 255 (805)
Q Consensus 176 ~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~ 255 (805)
.+....+..+-|.+.+..|++...++++..+|.++..+|.++.|+++|| +.|+.+.....+.++..+...+..+...+.
T Consensus 225 ~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~ 303 (394)
T COG2814 225 TGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALA 303 (394)
T ss_pred cchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 3444556667788889999999999999999999999999999999999 988888888777777766665554443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q psy10046 256 LTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGA 335 (805)
Q Consensus 256 i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~ 335 (805)
++.-++.|++.+.........+++..|+.++.+.++....+++|..+|..++|.+.+++|+....|+.+++.++.+++.+
T Consensus 304 ~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~ 383 (394)
T COG2814 304 LALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLAL 383 (394)
T ss_pred HHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Confidence 43456778877777777777777766899999999999999999999999999999999999999999888877777665
Q ss_pred hc
Q psy10046 336 IM 337 (805)
Q Consensus 336 ~~ 337 (805)
+.
T Consensus 384 ~~ 385 (394)
T COG2814 384 LS 385 (394)
T ss_pred HH
Confidence 53
No 154
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.06 E-value=1.3e-08 Score=115.59 Aligned_cols=144 Identities=13% Similarity=-0.007 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Q psy10046 181 SFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGL 260 (805)
Q Consensus 181 ~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~ 260 (805)
.....+|.+.++.|.+....+...+++.++..++.+++|+++||+|||+.+.++.++.+++.++....++.....++ -+
T Consensus 249 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 327 (426)
T PRK12307 249 PIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLG-AC 327 (426)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHH-HH
Confidence 34445677777889999999999999999999999999999999999999988887776665554433221111121 13
Q ss_pred HHHHH--HHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHH
Q psy10046 261 LAGIG--LALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSG 325 (805)
Q Consensus 261 l~G~g--~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~ 325 (805)
+.|++ ..+..+....++.+.+| +.||+++|+......+|..++|++.+++.+..|+.+..++..+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~ 395 (426)
T PRK12307 328 LFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVA 395 (426)
T ss_pred HHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 33332 22233445566778888 6799999999999999999999999999999887765444433
No 155
>PRK09952 shikimate transporter; Provisional
Probab=99.05 E-value=2.5e-08 Score=114.02 Aligned_cols=150 Identities=16% Similarity=0.194 Sum_probs=108.7
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh---cCcHHHHHHHHHHHHHH
Q psy10046 188 EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCF---SRTIEHMYLTFGLLAGI 264 (805)
Q Consensus 188 ~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~---a~~~~~l~i~~R~l~G~ 264 (805)
++.+.+|.+......+..+..+...++.+++|+++||+|||++++++.++..++.++..+ ..+...+++...++.|+
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 445678988876666666677777888999999999999999988887665554433322 22323332333466678
Q ss_pred HHHHHHHHHHHHHhhhcc-cchhHHHHHHH-HHhhHHHhhHHHHHHHHhhcc--chHHHHHHHHHHHHHHHHHHHhc
Q psy10046 265 GLALSYVTAVVSIAFWFE-KKRGLACSLGS-TGTGFGTTVYAPITSYLISEY--GWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 265 g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~-~~~~lG~~lgp~i~~~l~~~~--gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
+.+...+...+++.+.+| +.|+.+.++.. .+..+|+.++|.+.+++.+.. +|+..+.+.++..++.++..++.
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 888777888888899998 66888888854 445689999999999998744 48888887777766666665544
No 156
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.04 E-value=1.9e-08 Score=115.52 Aligned_cols=156 Identities=12% Similarity=0.113 Sum_probs=106.3
Q ss_pred HHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh--CChHHH-HHHHHHHHHHHHHHHh--cCcHHHH
Q psy10046 181 SFGLLYIEFLN-EFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKF--GCRSMT-IVAGIISGVGFVLSCF--SRTIEHM 254 (805)
Q Consensus 181 ~~~~~~p~i~~-~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~--Grr~vl-ii~~~l~~i~~i~~a~--a~~~~~l 254 (805)
....++|.+.+ ++|.+..+.++..+++.++..++.+++|+++||+ |||... ++.+.+..++.++..+ ..+.+.+
T Consensus 271 ~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 350 (452)
T PRK11273 271 GILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVD 350 (452)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHH
Confidence 34445566555 4799989999999999999999999999999999 555432 2223333333332222 3344443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHh-hHHHHHHHHhhccchHHHHHHHHHHHHHHHH
Q psy10046 255 YLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTT-VYAPITSYLISEYGWRGTVLLLSGTFFNLCV 332 (805)
Q Consensus 255 ~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~-lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i 332 (805)
++ ..++.|++..........+..+.+| +.||+++|+......+|.. ++|.+.|++.++.||++.|++.++++++.++
T Consensus 351 ~~-~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~ 429 (452)
T PRK11273 351 MA-CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVI 429 (452)
T ss_pred HH-HHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 23 2344454433323333344557787 6799999999888888765 4799999999999999999988887777666
Q ss_pred HHHhc
Q psy10046 333 CGAIM 337 (805)
Q Consensus 333 ~~~~~ 337 (805)
+...+
T Consensus 430 ~~~~~ 434 (452)
T PRK11273 430 LLIVV 434 (452)
T ss_pred HHHHH
Confidence 66554
No 157
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.03 E-value=8.5e-09 Score=115.52 Aligned_cols=135 Identities=10% Similarity=0.057 Sum_probs=109.1
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH-HHHhcCcHHHHHHHHHHHHHHH
Q psy10046 187 IEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFV-LSCFSRTIEHMYLTFGLLAGIG 265 (805)
Q Consensus 187 p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i-~~a~a~~~~~l~i~~R~l~G~g 265 (805)
+++.+++|.+..+++++.+++.++..++.++.|+++||+|||+.+.++.++.++..+ +.....+.+.+.+ ..++.|++
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 341 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGL-GLFFQQML 341 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHH-HHHHHHHH
Confidence 345567899999999999999999999999999999999999998888776544333 3344455555544 34677777
Q ss_pred HHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc-hHHHHHH
Q psy10046 266 LALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG-WRGTVLL 322 (805)
Q Consensus 266 ~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g-Wr~~f~i 322 (805)
.+...+....++.+.+| ++|++++|+......+|..++|+++|++.++.| |+..++.
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 342 VQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 77667777788888887 679999999999999999999999999999988 8776654
No 158
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.03 E-value=1.6e-08 Score=116.60 Aligned_cols=156 Identities=14% Similarity=0.059 Sum_probs=113.9
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc--Cc-HHHHHHHHH
Q psy10046 183 GLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS--RT-IEHMYLTFG 259 (805)
Q Consensus 183 ~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a--~~-~~~l~i~~R 259 (805)
..+.|.+.+++|.+.....+......++..++.+++++++||+|||++++++.++.+++.++.+.. .+ .....+.+-
T Consensus 291 ~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 370 (479)
T PRK10077 291 LYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSM 370 (479)
T ss_pred HHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 345688888899987777787788888999999999999999999999999999888887776543 12 111111122
Q ss_pred HHHHHHHHHH-HHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHH------HhhccchHHHHHHHHHHHHHHH
Q psy10046 260 LLAGIGLALS-YVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSY------LISEYGWRGTVLLLSGTFFNLC 331 (805)
Q Consensus 260 ~l~G~g~g~~-~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~------l~~~~gWr~~f~i~~~~~~~~~ 331 (805)
++.+++.+.. .+....++.+.+| ++|+.++|+......+|.++++.+.+. +.+.++|++.|++.++++++.+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (479)
T PRK10077 371 LFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAA 450 (479)
T ss_pred HHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHH
Confidence 3344444332 2556778888888 679999999998888888887655544 3457899999999887777666
Q ss_pred HHHHhcc
Q psy10046 332 VCGAIMR 338 (805)
Q Consensus 332 i~~~~~~ 338 (805)
++.+++.
T Consensus 451 ~~~~~~~ 457 (479)
T PRK10077 451 LFMWKFV 457 (479)
T ss_pred HHHHhcc
Confidence 6655543
No 159
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.00 E-value=2.1e-08 Score=112.95 Aligned_cols=142 Identities=13% Similarity=0.219 Sum_probs=115.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH
Q psy10046 194 GASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTA 273 (805)
Q Consensus 194 g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~ 273 (805)
+.+....+++.++..+...++.++.|++.||+|+|+.++++.++.++..++.+++++.+.+++ .+++.|++........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~-~~~l~g~~~~~~~~~~ 328 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVI-LKMLHAFEVPFLLVGC 328 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHH-HHHHHHHHHHHHHHHH
Confidence 455667888899999999999999999999999999999999999998888788888888756 5789998876665555
Q ss_pred HHHHhhhcc-cchhHHHHH-HHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHh
Q psy10046 274 VVSIAFWFE-KKRGLACSL-GSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 274 ~~~l~~~~p-~~rg~a~gi-~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
..++.+..+ +.++...+. ++....+|.+++++++|++.+..||+..|++.+++.++..++..+
T Consensus 329 ~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 329 FKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 555555555 446665555 567889999999999999999999999999998887776666544
No 160
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.99 E-value=2.5e-08 Score=113.84 Aligned_cols=156 Identities=10% Similarity=-0.045 Sum_probs=105.9
Q ss_pred HHHHHHHHHH-HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh--C-ChHHHHHHHHHHHHHHH--HHHhcCcHHHH
Q psy10046 181 SFGLLYIEFL-NEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKF--G-CRSMTIVAGIISGVGFV--LSCFSRTIEHM 254 (805)
Q Consensus 181 ~~~~~~p~i~-~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~--G-rr~vlii~~~l~~i~~i--~~a~a~~~~~l 254 (805)
.....+|.+. +++|++..+.++..+++.++..++.+++|+++||+ + |+....+..+...+..+ +.....+...+
T Consensus 261 ~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (434)
T PRK11663 261 AINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQ 340 (434)
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHH
Confidence 3344455555 67899999999999999999999999999999998 3 33332222211111111 11112233333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q psy10046 255 YLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 255 ~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~ 333 (805)
.+ +.++.|++...........+.+.+| ++|+.++|+.+....+|.+++|++.+++.++.||+..|++.+++.++..+.
T Consensus 341 ~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~ 419 (434)
T PRK11663 341 AA-CFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALL 419 (434)
T ss_pred HH-HHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 22 2344444333223333445567776 689999999999999999999999999999999999999988887776665
Q ss_pred HHhc
Q psy10046 334 GAIM 337 (805)
Q Consensus 334 ~~~~ 337 (805)
.++.
T Consensus 420 ~~~~ 423 (434)
T PRK11663 420 LLPF 423 (434)
T ss_pred HHHH
Confidence 5543
No 161
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.98 E-value=3.6e-08 Score=114.37 Aligned_cols=153 Identities=14% Similarity=0.163 Sum_probs=132.4
Q ss_pred HHHHHHH-HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy10046 184 LLYIEFL-NEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLA 262 (805)
Q Consensus 184 ~~~p~i~-~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~ 262 (805)
.++|.+. +.+|.+...+|++.+++.+|..+|.++.+++.+++++++.+.++.++++++.+..+++++.+..+++ -++.
T Consensus 239 aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~-l~l~ 317 (524)
T PF05977_consen 239 ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIA-LFLA 317 (524)
T ss_pred HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHH-HHHH
Confidence 3456665 5689999999999999999999999999999999999999999999999999999999999888664 5888
Q ss_pred HHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 263 GIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 263 G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
|++.........+.+....| +.||++++++.+....+..+|.++.|++.+.+|.+..+.+.++..+++.++.+..
T Consensus 318 G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 318 GAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99888888888888888888 5699999999999999999999999999999999999888776655555554443
No 162
>PRK15075 citrate-proton symporter; Provisional
Probab=98.98 E-value=4.9e-08 Score=111.48 Aligned_cols=137 Identities=14% Similarity=0.110 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH-H---HhcCcHHHHH
Q psy10046 181 SFGLLYIEFLNE-FGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVL-S---CFSRTIEHMY 255 (805)
Q Consensus 181 ~~~~~~p~i~~~-~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~-~---a~a~~~~~l~ 255 (805)
....+.|.+.++ +|++..+.++...++.++..++.+++|+++||+|||++++++.++..+..++ . ...+++..+.
T Consensus 256 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK15075 256 LITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARML 335 (434)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 344445666554 8999999999999999999999999999999999999887765544332211 1 1223443332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHH-HhhHHHhhHHHHHHHHhhccchHH
Q psy10046 256 LTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGST-GTGFGTTVYAPITSYLISEYGWRG 318 (805)
Q Consensus 256 i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~-~~~lG~~lgp~i~~~l~~~~gWr~ 318 (805)
+ ..++.|++.+...+....++.+.+| +.|+.++++... +..++..++|.+.+++.++.|+++
T Consensus 336 ~-~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~ 399 (434)
T PRK15075 336 A-VELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKA 399 (434)
T ss_pred H-HHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCch
Confidence 3 2355666766666666677788887 679999998644 445567789999999999888643
No 163
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.97 E-value=1.4e-08 Score=110.54 Aligned_cols=173 Identities=20% Similarity=0.236 Sum_probs=124.3
Q ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh--CChHHH-HHHHH
Q psy10046 160 WGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKF--GCRSMT-IVAGI 236 (805)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~--Grr~vl-ii~~~ 236 (805)
+-|.+.++.+++++.=++.. .+++ -++.+..|.+...+++..++|-++...|.+++|+++||+ |||... ++.++
T Consensus 253 ~iW~la~a~vfvYivR~gi~-dW~p--~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~ 329 (448)
T COG2271 253 LIWLLALANVFVYVVRYGIN-DWGP--LYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFML 329 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHh-hhHH--HHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 34555555554444333322 2333 256778899999999999999999999999999999984 777654 44444
Q ss_pred HHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-hhHHHHHHHHHhhH-HHhhHHHHHHHHhh
Q psy10046 237 ISGVGFVLSCFSRT--IEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEKK-RGLACSLGSTGTGF-GTTVYAPITSYLIS 312 (805)
Q Consensus 237 l~~i~~i~~a~a~~--~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~-rg~a~gi~~~~~~l-G~~lgp~i~~~l~~ 312 (805)
+..++.+..-++++ +....+ +-++.|+..-+..-.......+..||+ -|.+.|+...+..+ |.+++....+++.+
T Consensus 330 ~i~~~~~~~w~~~~~~~~l~~~-~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d 408 (448)
T COG2271 330 LITASLVLYWLAPNGSYLLDAI-LLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIAD 408 (448)
T ss_pred HHHHHHHHHHcCCCccHHHHHH-HHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEe
Confidence 44455555555553 355544 567888887776655555555888955 89999999998888 88888888899999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHh
Q psy10046 313 EYGWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 313 ~~gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
.+||.+.|.+..+.++++.++.+.
T Consensus 409 ~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 409 TWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHH
Confidence 999999999887766665555444
No 164
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.96 E-value=6.4e-08 Score=112.30 Aligned_cols=151 Identities=10% Similarity=0.123 Sum_probs=113.1
Q ss_pred HHHHHHHhCCChhHHHHHHH-HHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH---HHhc-CcHHHHHHHHHH
Q psy10046 186 YIEFLNEFGASKSKTAWIGS-LFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVL---SCFS-RTIEHMYLTFGL 260 (805)
Q Consensus 186 ~p~i~~~~g~s~~~~~l~~s-~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~---~a~a-~~~~~l~i~~R~ 260 (805)
.|++.+++|.+..+++++.. ...++..++.+++|+++||+|+|+.++++.++.+++.++ .++. ++.+.+.+ .-+
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~-~~~ 324 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGA-AVF 324 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHH-HHH
Confidence 35566789999999999874 666899999999999999999988877666554544332 2333 34444433 235
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 261 LAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 261 l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
+..++.|...+...++..+..+ +.+++..++.+....+|.+++++++|++.+..||+..|++.++++++.+++.++.
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555556666667776 5588999999999999999999999999999999999998888877776666554
No 165
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.96 E-value=1.7e-08 Score=116.79 Aligned_cols=153 Identities=16% Similarity=0.182 Sum_probs=108.8
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCh-------HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Q psy10046 188 EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCR-------SMTIVAGIISGVGFVLSCFSRTIEHMYLTFGL 260 (805)
Q Consensus 188 ~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr-------~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~ 260 (805)
++.+++|++...++++.+++.++..++.+++|+++||+||| ..+.+..++.++..++.++..+.+..++ +-+
T Consensus 278 ~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~-~~~ 356 (476)
T PLN00028 278 YFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIV-VMI 356 (476)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHH-HHH
Confidence 44567899999999999999999999999999999999865 2333333334444444555566555433 345
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhccCC
Q psy10046 261 LAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIMRDP 340 (805)
Q Consensus 261 l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~~~p 340 (805)
+.|++.+.......+++.+..|+++|.+.|+...+..+|+.++|.+.+ .....+|++.|++.+++.++..++.++.+.|
T Consensus 357 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~~~ 435 (476)
T PLN00028 357 LFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIHFP 435 (476)
T ss_pred HHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHheecc
Confidence 666666655555556666777888999999987777777777766543 2223569999999988888887777777655
Q ss_pred ch
Q psy10046 341 EW 342 (805)
Q Consensus 341 ~~ 342 (805)
.+
T Consensus 436 ~~ 437 (476)
T PLN00028 436 QW 437 (476)
T ss_pred ch
Confidence 43
No 166
>PRK10054 putative transporter; Provisional
Probab=98.94 E-value=3e-09 Score=119.94 Aligned_cols=144 Identities=14% Similarity=0.135 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHH
Q psy10046 658 LHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCG 736 (805)
Q Consensus 658 ~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~ 736 (805)
+.++.+.++.++...+......++|.|+++ .|++..+++++.+...++.+++.++.|+++|| ++||+++.++.++.+
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr--~g~k~~~~~~~~~~~ 84 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK--FDKKRYMLLAITAFA 84 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCcchhHHHHHHHHH
Confidence 446777778888888888888889988865 79999999999999999999999999999999 999999988888887
Q ss_pred HHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 737 VSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 737 i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
++++++. ..++++.++++.++.|.+.+...++...+..+.+|+++|++++|+.+....+|.++||++
T Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l 151 (395)
T PRK10054 85 SGFIAIP-LVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPL 151 (395)
T ss_pred HHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777666 455666666555666777677777888899999999999999999999999999999875
No 167
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.94 E-value=9.4e-08 Score=109.74 Aligned_cols=162 Identities=12% Similarity=0.079 Sum_probs=136.9
Q ss_pred hHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCh--HHHHHHHHHHHHHHHHHHh-----
Q psy10046 175 GDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCR--SMTIVAGIISGVGFVLSCF----- 247 (805)
Q Consensus 175 ~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr--~vlii~~~l~~i~~i~~a~----- 247 (805)
.++..........+..+++|++..+...+..+..+..++|++++|++.||+|.| ++++++++++.+..+...+
T Consensus 294 ~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~ 373 (477)
T PF11700_consen 294 SDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPS 373 (477)
T ss_pred HHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 455555555555667779999999999999999999999999999999999999 8888888888666655555
Q ss_pred ---cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc-hHHHHHH
Q psy10046 248 ---SRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG-WRGTVLL 322 (805)
Q Consensus 248 ---a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g-Wr~~f~i 322 (805)
.++.+.+++ +.++.|++.|+.++..-+++++..| .+.+..+|++....-....+||++.+.+.+..| -|+.++.
T Consensus 374 ~~g~~~~~~f~~-~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~ 452 (477)
T PF11700_consen 374 FFGLKSPWEFWV-LAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLF 452 (477)
T ss_pred ccCcccHHHHHH-HHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 567777766 5799999999999999999999888 668999999999999999999999999999876 8888888
Q ss_pred HHHHHHHHHHHHHhc
Q psy10046 323 LSGTFFNLCVCGAIM 337 (805)
Q Consensus 323 ~~~~~~~~~i~~~~~ 337 (805)
+.++.++.+++.+++
T Consensus 453 l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 453 LLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHHhhc
Confidence 877777777666555
No 168
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.92 E-value=1.3e-07 Score=106.70 Aligned_cols=145 Identities=13% Similarity=0.071 Sum_probs=113.9
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Q psy10046 186 YIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIG 265 (805)
Q Consensus 186 ~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g 265 (805)
.|.+.+++|.+....+++...+.++..++.++.+++.||.+++..+....+...+..++..+..+.+.+.+ ..++.|++
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~G~~ 318 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATG-VAIIWGLT 318 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHH
Confidence 46777889999999999999999999999999999999965444444333334444444455566666655 46888999
Q ss_pred HHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHH
Q psy10046 266 LALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLC 331 (805)
Q Consensus 266 ~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~ 331 (805)
.+...+...+++.+..|++++++.++......+|..+|+.++|++.+..|++..++..+++.++..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 319 FALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 988888888888877787778888888888899999999999999999999998888776554443
No 169
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.92 E-value=5.7e-08 Score=106.97 Aligned_cols=131 Identities=11% Similarity=0.099 Sum_probs=113.5
Q ss_pred HHHHHHHHH-hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCc-HHHHHHHHHHH
Q psy10046 184 LLYIEFLNE-FGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRT-IEHMYLTFGLL 261 (805)
Q Consensus 184 ~~~p~i~~~-~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~-~~~l~i~~R~l 261 (805)
...|.+.++ +|.+..+.+++.+++.++..++.++.+++.||+|||+.+.++.++.+++.++..+.++ .+.+++ ..++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 310 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLV-LWFA 310 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHH-HHHH
Confidence 445666665 8999999999999999999999999999999999999999888888888877777764 666655 5789
Q ss_pred HHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc
Q psy10046 262 AGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG 315 (805)
Q Consensus 262 ~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g 315 (805)
.|++.+...+...+++.+..| ++|++++++......+|..++|.++|++.+..|
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 311 IGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999888888888888887 679999999999999999999999999988654
No 170
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.91 E-value=8.4e-08 Score=107.52 Aligned_cols=148 Identities=12% Similarity=0.069 Sum_probs=106.7
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHH
Q psy10046 186 YIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCF-SRTIEHMYLTFGLLAGI 264 (805)
Q Consensus 186 ~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~-a~~~~~l~i~~R~l~G~ 264 (805)
.|.+.+.+|.+....++..+++.++..++.++.|++.||+|+|+.+.++.++.+++.++... .++.+..++ +.++.++
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~ 301 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLI-FAFICCA 301 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHHH
Confidence 45666678999999999999999999999999999999999999999888887777655543 445444433 3456666
Q ss_pred HHHHHHHHHHHHHh-hhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHHHHh
Q psy10046 265 GLALSYVTAVVSIA-FWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISE-YGWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 265 g~g~~~~~~~~~l~-~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~-~gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
+.....+....... ...+ +.++.+ .......+|.++||.++|++.+. .+|++.+++.+++.++......+
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 302 GLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 65544443333333 3333 334443 34667789999999999999985 68999999887665554444433
No 171
>TIGR00895 2A0115 benzoate transport.
Probab=98.91 E-value=6.1e-08 Score=108.06 Aligned_cols=129 Identities=15% Similarity=0.135 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Q psy10046 181 SFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGL 260 (805)
Q Consensus 181 ~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~ 260 (805)
....+.|.+.+++|.+..+.++..+++.++..++.+++|+++||+|||+.++...++..+..++.....+.+.+++ +.+
T Consensus 268 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 346 (398)
T TIGR00895 268 FLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLL-LGA 346 (398)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHH-HHH
Confidence 3444567888899999999999999999999999999999999999995544444333333333333556666645 468
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHH
Q psy10046 261 LAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYL 310 (805)
Q Consensus 261 l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l 310 (805)
+.|++.+...+...+++.+.+| ++|++++|+......+|.++||+++|++
T Consensus 347 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 347 IAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 8999999989999999998887 6799999999999999999999999876
No 172
>PRK10504 putative transporter; Provisional
Probab=98.89 E-value=5.6e-09 Score=120.36 Aligned_cols=146 Identities=17% Similarity=0.261 Sum_probs=126.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHH
Q psy10046 657 ELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCG 736 (805)
Q Consensus 657 ~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~ 736 (805)
.+.+|.++++.++..........++|.+.++.|.+..+.+++.+.+.++.+++.+++|+++|| ++||+++..+.++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~--~g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADR--VGVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hchHHHHHHHHHHHH
Confidence 345677777777777777778889999999999999999999999899999999999999999 999999888887777
Q ss_pred HHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCCC
Q psy10046 737 VSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPLA 805 (805)
Q Consensus 737 i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ia 805 (805)
++.+... ..++.+.+++..++.|++.+...+....++.+.+|++++++++|+.+....+|.++||+++
T Consensus 87 ~~~~~~~-~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 154 (471)
T PRK10504 87 LGSLFCA-LSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALG 154 (471)
T ss_pred HHHHHHH-HhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 7766655 4567777888889999999999999999999999999999999999999999999998763
No 173
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.89 E-value=1.4e-07 Score=106.57 Aligned_cols=149 Identities=9% Similarity=-0.082 Sum_probs=114.2
Q ss_pred HHHH-HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc-----CcHHHHHHHHH
Q psy10046 186 YIEF-LNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS-----RTIEHMYLTFG 259 (805)
Q Consensus 186 ~p~i-~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a-----~~~~~l~i~~R 259 (805)
.|.+ .+++|.+..+.++......++..++.+++|+++||+|+|+.+.++.++.+++.++.++. .+.+++++ .-
T Consensus 238 ~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~ 316 (406)
T PRK15402 238 SPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTA-GL 316 (406)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHH-HH
Confidence 3444 56789999999988888888999999999999999999999988888777776665543 34555544 35
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGA 335 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~ 335 (805)
++.|+|.+...+..........++++|++.+++.....+|..+|+.+++.+.+..+|....+..++..++.+++..
T Consensus 317 ~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK15402 317 SLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVR 392 (406)
T ss_pred HHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHH
Confidence 7888888877666555544445678999999999999999999999999999888877766665544444444333
No 174
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.88 E-value=1.9e-07 Score=104.94 Aligned_cols=145 Identities=14% Similarity=0.106 Sum_probs=108.3
Q ss_pred HHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh------cCcHHHHHHHHH
Q psy10046 187 IEFLNEFGASKSKTAWIGSLFM-AVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCF------SRTIEHMYLTFG 259 (805)
Q Consensus 187 p~i~~~~g~s~~~~~l~~s~~~-lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~------a~~~~~l~i~~R 259 (805)
+.+.+|.|++..+++++..++. ++..++.+++|++.||+|+|+.+.++.++.++..+.... ..+...++. +-
T Consensus 232 ~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 310 (390)
T TIGR02718 232 KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWS-CS 310 (390)
T ss_pred hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHH-HH
Confidence 4555678999999999988876 466778899999999999999988877665333222211 223333323 33
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc-c-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHH
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWF-E-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCV 332 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~-p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i 332 (805)
++.+++.+...+...+.+.+.. + +.+++.+++.+....+|..+||.++|++.+..||+..|++.+++.++..+
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 5556667777777777766554 4 57899999999999999999999999999999999999887766655443
No 175
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.86 E-value=1.5e-07 Score=107.21 Aligned_cols=120 Identities=16% Similarity=0.263 Sum_probs=98.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10046 196 SKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR-TIEHMYLTFGLLAGIGLALSYVTAV 274 (805)
Q Consensus 196 s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~-~~~~l~i~~R~l~G~g~g~~~~~~~ 274 (805)
+....+++.+++.++..++.+++++++||+|+|+++.++.++.+++.++..+.+ +.+.+++ +.++.|++.+...+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILV-LIILAGFGQNFVTGLVW 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 456677888888999999999999999999999999999988888877776653 4455444 46788898888888888
Q ss_pred HHHhhhcc--------cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccch
Q psy10046 275 VSIAFWFE--------KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGW 316 (805)
Q Consensus 275 ~~l~~~~p--------~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gW 316 (805)
+++++..+ +.+|.++|+++.+..+|..+++.+.+++.+..||
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88776542 3479999999999999999999999999887665
No 176
>PRK10133 L-fucose transporter; Provisional
Probab=98.83 E-value=2.2e-07 Score=106.30 Aligned_cols=140 Identities=12% Similarity=0.066 Sum_probs=113.7
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Q psy10046 190 LNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALS 269 (805)
Q Consensus 190 ~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~ 269 (805)
.+.+|.+..++++..+.+.+++.++.++.|++.||+|+|+++.++.++.+++.++..+.++...+ +. -++.|++.+..
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~-~~l~glg~~~i 364 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGL-IA-LTLCSAFMSIQ 364 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHH-HH-HHHHHHHHHHH
Confidence 34689999999999999999999999999999999999999999888877777766666664333 32 36789999999
Q ss_pred HHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc-hHHHHHHHHHHHHHHHH
Q psy10046 270 YVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYG-WRGTVLLLSGTFFNLCV 332 (805)
Q Consensus 270 ~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g-Wr~~f~i~~~~~~~~~i 332 (805)
+|...+...+.++++.+.+.++..+ ..+|..++|++.|.+.+..| -+..|++..+..+.+++
T Consensus 365 ~P~~~s~a~~~~~~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 365 YPTIFSLGIKNLGQDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHcccchhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 9999999888888877777887764 44688899999999999887 78888765544444333
No 177
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.81 E-value=5.1e-07 Score=103.01 Aligned_cols=154 Identities=14% Similarity=0.103 Sum_probs=97.4
Q ss_pred HHHHHHHHH-HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH--h--cCcHHHHHH
Q psy10046 182 FGLLYIEFL-NEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSC--F--SRTIEHMYL 256 (805)
Q Consensus 182 ~~~~~p~i~-~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a--~--a~~~~~l~i 256 (805)
+...+|.+. +.+|.+..+.++..++..++..++.++.|+++||+|||++++++.++.++..+... . ..+....+.
T Consensus 262 ~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 262 FTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 334455544 56899988999988888888899999999999999999988776655443332211 1 223332212
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhh-HHHhhHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHH
Q psy10046 257 TFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTG-FGTTVYAPITSYLISEYG-WRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 257 ~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~-lG~~lgp~i~~~l~~~~g-Wr~~f~i~~~~~~~~~i~ 333 (805)
+-++.+++.+...+....++.+++| +.|+.++|+.+.... ++....|.+.+.+ +..| |...+++.++..++.++.
T Consensus 342 -~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 342 -LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHH
Confidence 1122333334444455667789998 669999999876544 3344577777755 4445 555555555555555555
Q ss_pred HHhc
Q psy10046 334 GAIM 337 (805)
Q Consensus 334 ~~~~ 337 (805)
.+++
T Consensus 420 ~~~l 423 (432)
T PRK10406 420 SLML 423 (432)
T ss_pred HHHh
Confidence 5544
No 178
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.81 E-value=7.9e-08 Score=111.95 Aligned_cols=154 Identities=14% Similarity=0.039 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHhCCChhHHH-----------H-HHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q psy10046 180 FSFGLLYIEFLNEFGASKSKTA-----------W-IGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCF 247 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~~~-----------l-~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~ 247 (805)
+......|.+.++.|.+....+ . ...+..++..++.+++++++||+|||++++++.++.+++.++.++
T Consensus 305 y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~ 384 (502)
T TIGR00887 305 YGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGF 384 (502)
T ss_pred HccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 3444456788888887643211 1 233444566678889999999999999998888777766655554
Q ss_pred cC----cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhc---------
Q psy10046 248 SR----TIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISE--------- 313 (805)
Q Consensus 248 a~----~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~--------- 313 (805)
.. +...+ +.+-++..++..+..+....+.+|.+| +.|++++|+......+|.+++|.+.+++.+.
T Consensus 385 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 463 (502)
T TIGR00887 385 AYNHLSTHGFL-AIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPT 463 (502)
T ss_pred HHHhcchhHHH-HHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccc
Confidence 21 11111 111111122222234455566779998 6699999999999999999999999998873
Q ss_pred -cchHHHHHHHHHHHHHHHHHH
Q psy10046 314 -YGWRGTVLLLSGTFFNLCVCG 334 (805)
Q Consensus 314 -~gWr~~f~i~~~~~~~~~i~~ 334 (805)
.++...|++.+++.++..+..
T Consensus 464 ~~~~~~~~~i~~~~~~~~~i~~ 485 (502)
T TIGR00887 464 GIWMGHVLEIFALFMFLGILFT 485 (502)
T ss_pred cccchHHHHHHHHHHHHHHHHh
Confidence 345667777777666655544
No 179
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.81 E-value=1.7e-08 Score=116.48 Aligned_cols=143 Identities=13% Similarity=0.181 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHH
Q psy10046 660 FLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVST 739 (805)
Q Consensus 660 ~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~ 739 (805)
+..++++.++...........+|.+.++.|.+..+.+++.+.+.++.+++.++.|+++|| +|||+++.++.++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKR--FGTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHH--hCcHHHHHHHHHHHHHHH
Confidence 344555566666666777788999999999999999999999999999999999999999 999999999998888888
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCCC
Q psy10046 740 ALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPLA 805 (805)
Q Consensus 740 l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ia 805 (805)
++.. ..++++.+++..++.|++.+...+....++.+.+|+++|+.++|+..+...+|.++||.++
T Consensus 82 ~~~~-~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 146 (485)
T TIGR00711 82 LLCG-VAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLG 146 (485)
T ss_pred HHHh-CcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccH
Confidence 7776 4677888888889999999999999999999999999999999999999999999998763
No 180
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.80 E-value=3e-07 Score=101.74 Aligned_cols=133 Identities=14% Similarity=0.113 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q psy10046 181 SFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKF-GCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFG 259 (805)
Q Consensus 181 ~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~-Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R 259 (805)
....++|.+.+++|.+..+.+++.+++.++..++.+++|+++||+ +||+.+.++.++.+++.++..+..+...+ + +-
T Consensus 215 ~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 292 (355)
T TIGR00896 215 SLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLW-A-WA 292 (355)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHH-H-HH
Confidence 344456777788999999999999999999999999999999999 56777778888888877777766554333 2 23
Q ss_pred HHHHHHHHHHHHHHHHHHhhh-cc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc
Q psy10046 260 LLAGIGLALSYVTAVVSIAFW-FE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG 315 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~-~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g 315 (805)
++.|++.+..++...+.+... .+ ++++...++......+|..++|.+.|++.++.|
T Consensus 293 ~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 293 LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 678999988888777766643 33 557888999888888999999999999998776
No 181
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.80 E-value=1.2e-07 Score=103.49 Aligned_cols=165 Identities=18% Similarity=0.223 Sum_probs=128.9
Q ss_pred HHHHHHhHHHHHHHHHHHHH-HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q psy10046 169 FFINMAGDGIAFSFGLLYIE-FLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCF 247 (805)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~p~-i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~ 247 (805)
++.++.++|....++..+|. +..+|+++...++.....+.+...+..+++|+|+||+|.++++.+..++.+++.++..+
T Consensus 224 sllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~ 303 (417)
T COG2223 224 SLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSL 303 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHc
Confidence 33444455655566655554 45679999999999999999999999999999999999999999988888888777766
Q ss_pred cC-------cHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc-h
Q psy10046 248 SR-------TIEHMYL---TFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYG-W 316 (805)
Q Consensus 248 a~-------~~~~l~i---~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g-W 316 (805)
.. +....+. ++.++.|+|.| ....++..++|++-|.+.|+.....++|+.+-|...+...+..| +
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~l~~~~G~GnG----svfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~ 379 (417)
T COG2223 304 FLTGFGHGGSFVVFVAVFLALFVFAGLGNG----SVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSY 379 (417)
T ss_pred cccccccCcchHHHHHHHHHHHHHhccCcc----hheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccH
Confidence 53 3333322 23444455544 45577788899999999999999999999999999999998887 8
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q psy10046 317 RGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 317 r~~f~i~~~~~~~~~i~~~~~ 337 (805)
...|++...+.+++.+..+..
T Consensus 380 ~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 380 TGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999888887777766554
No 182
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.79 E-value=4.4e-07 Score=101.05 Aligned_cols=135 Identities=19% Similarity=0.178 Sum_probs=98.9
Q ss_pred HHH-HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc-----CcHHHHHHHHH
Q psy10046 186 YIE-FLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS-----RTIEHMYLTFG 259 (805)
Q Consensus 186 ~p~-i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a-----~~~~~l~i~~R 259 (805)
.|. +.+++|.+..+.+++.+.+.++..++.++.|++.||+|+|+.+.++.++..++.++..+. .....+ +...
T Consensus 229 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 307 (385)
T TIGR00710 229 APFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMI-IGPM 307 (385)
T ss_pred ChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH-HHHH
Confidence 344 445789999999999999999999999999999999999999888887777776665543 223333 3345
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhH-HHhhHHHHHHHHhhccchHHHHHH
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGF-GTTVYAPITSYLISEYGWRGTVLL 322 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~l-G~~lgp~i~~~l~~~~gWr~~f~i 322 (805)
++.|++.+...+.......+..|++++++.++....... |.+.+++ .+.+.+..+|...++.
T Consensus 308 ~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 308 MFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHH-HHhccccChHHHHHHH
Confidence 678888888888887777777788899999998876655 4555554 4454444445444433
No 183
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.79 E-value=5.6e-07 Score=101.59 Aligned_cols=147 Identities=16% Similarity=0.224 Sum_probs=103.7
Q ss_pred HHHHHHhCCChhHHHHHHHHH-HHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH---Hhc-CcHHHHHHHH---
Q psy10046 187 IEFLNEFGASKSKTAWIGSLF-MAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLS---CFS-RTIEHMYLTF--- 258 (805)
Q Consensus 187 p~i~~~~g~s~~~~~l~~s~~-~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~---a~a-~~~~~l~i~~--- 258 (805)
+.+.+++|++..+++++.+.. .++..++.+++|++.||+|+|+.+.++.++.++..+.. ++. ++.+.+++..
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 456777999999999988665 45689999999999999999998877776665554332 343 4555443321
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHh
Q psy10046 259 GLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 259 R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
.++.|++.+...+....++.+.+|. ...++......+|..++++++|.+.+..||++.|++.++++++.+++.+.
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSA---TQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 1344555555566666666666662 23455555567787777789999999999999999988777766555443
No 184
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.79 E-value=9.7e-09 Score=119.33 Aligned_cols=157 Identities=12% Similarity=0.104 Sum_probs=124.1
Q ss_pred HhhhccccchhhHH-HHHHHHHHHHHHHhhhhhhhhHHHHHH-hcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCc-
Q psy10046 646 IVGMFDFSMFLELH-FLLVSISTILLFTWFVIPYFYLTDFVT-NQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWL- 722 (805)
Q Consensus 646 ~~~~~~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~lp~~~~-~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~- 722 (805)
..+.++.+.+++|+ ++..++..++...+++.+..+++.|++ +.|++..+++.+...+.+......+++|+++|| +
T Consensus 8 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr--~~ 85 (500)
T PRK09584 8 PTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDK--VL 85 (500)
T ss_pred CCCCCChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cc
Confidence 45677788888875 777777778888888888889999986 489999998887777665555556789999999 7
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCcc--chhhhhHHHHHHHhhhhcc
Q psy10046 723 NVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLD--RFATAYGLTLLAQGIGNLV 800 (805)
Q Consensus 723 gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~--~~~~a~gl~~~~~~ig~~i 800 (805)
|||+++.++.++.+++.+++.+..+..+.+++..++.|++.|...+....++.+.+|++ ++..++++.++..++|+++
T Consensus 86 G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~ 165 (500)
T PRK09584 86 GTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF 165 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH
Confidence 99999999988888887776633334455556667788888888888888999999754 3556889999999999999
Q ss_pred CCCC
Q psy10046 801 GPPL 804 (805)
Q Consensus 801 gp~i 804 (805)
||.+
T Consensus 166 gp~i 169 (500)
T PRK09584 166 SMLA 169 (500)
T ss_pred HHHH
Confidence 8865
No 185
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.79 E-value=1.6e-07 Score=107.31 Aligned_cols=156 Identities=10% Similarity=0.064 Sum_probs=102.7
Q ss_pred HHHHHHHHHH-HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH---HHHHHHHh--cCcHHHHH
Q psy10046 182 FGLLYIEFLN-EFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISG---VGFVLSCF--SRTIEHMY 255 (805)
Q Consensus 182 ~~~~~p~i~~-~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~---i~~i~~a~--a~~~~~l~ 255 (805)
...+.|.+.+ .+|.+..+.++..+++.++..++.+++|+++||+|+++....+.++.. ++.++..+ ..+.+..+
T Consensus 270 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T TIGR00712 270 VLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDM 349 (438)
T ss_pred HHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHH
Confidence 3344555555 479999999999999999999999999999999975432222322221 12222222 22333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHH-HhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q psy10046 256 LTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFG-TTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 256 i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG-~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~ 333 (805)
+ .-++.|++..+..........+.+| ++||.++|+.+....+| .+++|.+.|.+.++.||.+.|++.+++.++.++.
T Consensus 350 ~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 428 (438)
T TIGR00712 350 I-CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 428 (438)
T ss_pred H-HHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 3 2344454432222222334557777 67999999998877776 5789999999999999999999888776666666
Q ss_pred HHhcc
Q psy10046 334 GAIMR 338 (805)
Q Consensus 334 ~~~~~ 338 (805)
.+++.
T Consensus 429 ~~~~~ 433 (438)
T TIGR00712 429 LIVVM 433 (438)
T ss_pred HHHHH
Confidence 55543
No 186
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.79 E-value=1.7e-08 Score=113.99 Aligned_cols=141 Identities=14% Similarity=0.184 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHH-hcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHH
Q psy10046 661 LLVSISTILLFTWFVIPYFYLTDFVT-NQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVST 739 (805)
Q Consensus 661 ~~~~i~~~~~~~~~~~~~~~lp~~~~-~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~ 739 (805)
+++.+..++...+++....+++.|++ +.|.+....+++.+...+...+.++++|+++|| ++||+.+.++.++.++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr--~g~k~~l~~~~~~~~~~~ 90 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR--FGAKPMIVTGMLMRAAGF 90 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH--hCchHHHHHHHHHHHHHH
Confidence 44556677777777777888888875 589999999999999999999999999999999 999999999999998888
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 740 ALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 740 l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+.+. ..++++.+++..++.|++.+...+...+++.+.+|+++++.++|+......+|..+||++
T Consensus 91 ~~~~-~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l 154 (400)
T PRK11646 91 ATMA-IAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALL 154 (400)
T ss_pred HHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776 456777778888888988887788888899999999999999999999999999999875
No 187
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.78 E-value=1.9e-07 Score=119.77 Aligned_cols=143 Identities=10% Similarity=0.048 Sum_probs=117.4
Q ss_pred HHHHHHhCCChh-HHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Q psy10046 187 IEFLNEFGASKS-KTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIG 265 (805)
Q Consensus 187 p~i~~~~g~s~~-~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g 265 (805)
.++.+.+|++.. ..+++.+++.++.+++.+++|+++||+++++++.++.++.+++.++.++..+.+.+++ +.++.|++
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~ 335 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLV-LFFLFGFS 335 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHH
Confidence 455677899988 9999999999999999999999999999999998888888888888888888877756 46888999
Q ss_pred HHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhh-ccchHHHHHHHHHHHHHH
Q psy10046 266 LALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLIS-EYGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 266 ~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~-~~gWr~~f~i~~~~~~~~ 330 (805)
.+...+...+++.+..| +.||+++|+..+...+|.++++.+++.+.. .+++.+.|++.+++.++.
T Consensus 336 ~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 336 AGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIG 402 (1146)
T ss_pred HHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 99888888888888777 679999999999999999888888776654 245666666655544433
No 188
>KOG3098|consensus
Probab=98.77 E-value=5.9e-07 Score=101.00 Aligned_cols=106 Identities=11% Similarity=-0.071 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy10046 203 IGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE 282 (805)
Q Consensus 203 ~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p 282 (805)
..++-...+.+++++.+.+.++.|.|+.++++..++.+..+..-+.+.+... + ...+.|+|.+..+.....++++...
T Consensus 55 ~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~y-f-ssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 55 GQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLY-F-SSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHH-H-HHHHhhhhHHheecccceehhhcCC
Confidence 3778888899999999999999999999999999999988877776655444 5 4789999999999999999998886
Q ss_pred -cchhHHHHHHHHHhhHHHhhHHHHHHHH
Q psy10046 283 -KKRGLACSLGSTGTGFGTTVYAPITSYL 310 (805)
Q Consensus 283 -~~rg~a~gi~~~~~~lG~~lgp~i~~~l 310 (805)
+.+.+..++.+.....+.++|..+...+
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 6688888888888888887776665444
No 189
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.77 E-value=1.7e-08 Score=114.46 Aligned_cols=141 Identities=17% Similarity=0.079 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHh
Q psy10046 661 LLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTA 740 (805)
Q Consensus 661 ~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l 740 (805)
+++++..++.+.......+..|.+.++.|.+..+.+++.+.+.++..++.+..|++.|| +|||+++..+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr--~G~r~~~~~~~~~~~~~~~ 88 (412)
T TIGR02332 11 IFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAI--IGARRWIAGIMVLWGIAST 88 (412)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH--hChHHHHHHHHHHHHHHHH
Confidence 33444444445545555566676667799999999999999999999999999999999 9999999999999888888
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 741 LMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 741 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+.. ..++++.+++.-++.|++.++..+....++.+.+|+++|+.++|++++...+|.+++|++
T Consensus 89 ~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~ 151 (412)
T TIGR02332 89 ATM-FATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLIL 151 (412)
T ss_pred HHH-HhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877 467788888888899999999888888899999999999999999999999998887754
No 190
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.77 E-value=3.7e-07 Score=101.58 Aligned_cols=143 Identities=18% Similarity=0.322 Sum_probs=122.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10046 196 SKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVV 275 (805)
Q Consensus 196 s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~ 275 (805)
+...+|.+.++..+.-++.-.+..++.+|+|.|+.++++.++.++=.++++++++.+.+.+ .+.+.|+-.+.......-
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~-~klLH~~e~~l~lva~fk 335 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISL-IKLLHALEFPLLLVAAFK 335 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4456899999999999999999999999999999999999999999999999999999866 699999999999999999
Q ss_pred HHhhhcccc-hhHHHHHH-HHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhccC
Q psy10046 276 SIAFWFEKK-RGLACSLG-STGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIMRD 339 (805)
Q Consensus 276 ~l~~~~p~~-rg~a~gi~-~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~~~ 339 (805)
+++..+|++ .++...+. +.+.++|.++.+.++|.+.++.|.+.+|++++.+.++..++.++..+
T Consensus 336 YI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 336 YITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 999999855 56666664 67889999999999999999999999999999888877777766543
No 191
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.76 E-value=2.2e-08 Score=112.83 Aligned_cols=142 Identities=15% Similarity=0.036 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHH
Q psy10046 658 LHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGV 737 (805)
Q Consensus 658 ~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i 737 (805)
+.|+.++++.++..++.......++.+..+.+.+....+++.+.+.+...++.+++|+++|| ++||+++.++.++.++
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr--~grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADS--FPKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhc--cCCchhhHHHHHHHHH
Confidence 45667777777766665555556666677889999999999999999999999999999999 9999999999988877
Q ss_pred HHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCCC
Q psy10046 738 STALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPLA 805 (805)
Q Consensus 738 ~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ia 805 (805)
+.+++. ...+. ++.-++.|++.+...+...+++.+.+|+++|+.++|+..+...+|.++||.++
T Consensus 81 ~~~~~~-~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lg 144 (393)
T PRK11195 81 GCLLML-FGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLG 144 (393)
T ss_pred HHHHHH-HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766554 23333 34456789999999999999999999999999999999999999999998763
No 192
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.76 E-value=1.6e-07 Score=103.79 Aligned_cols=132 Identities=18% Similarity=0.113 Sum_probs=95.1
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-ChHH-HHHHH-HHHHHHHHHHHh--cCcHHHHHHHHHHHH
Q psy10046 188 EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFG-CRSM-TIVAG-IISGVGFVLSCF--SRTIEHMYLTFGLLA 262 (805)
Q Consensus 188 ~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~G-rr~v-lii~~-~l~~i~~i~~a~--a~~~~~l~i~~R~l~ 262 (805)
++.+.+|.+..+.++..+++.++..++.++.|+++||++ +|+. +.+.. .+..++.++... ..+...+++ +.++.
T Consensus 242 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 320 (379)
T TIGR00881 242 YLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLI-CLFAL 320 (379)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHH-HHHHH
Confidence 345678999999999999999999999999999999864 3332 22222 222222222222 234444433 35667
Q ss_pred HHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHH
Q psy10046 263 GIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTV 320 (805)
Q Consensus 263 G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f 320 (805)
|++..+..+....++.+.+| ++||++.|++.....+|..++|.+.|.+.++.||++.|
T Consensus 321 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 321 GFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 76655555556667778887 67999999999999999999999999999999998764
No 193
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.75 E-value=2.3e-08 Score=114.76 Aligned_cols=145 Identities=14% Similarity=0.074 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCc-cchhHHHHHHHHH
Q psy10046 658 LHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWL-NVKKTYAACLIGC 735 (805)
Q Consensus 658 ~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~-gr~~~~~~~~~~~ 735 (805)
+.++.++...+...++++.+..++|.|+.+ .|+++.+++.+...+.+...++.+++|+++|| + |||+++.++.++.
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDR--ilGrrr~iliG~il~ 86 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADK--VLGNRMAVMLGALLM 86 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccCcHHHHHHHHHHH
Confidence 345555556666677788888899999876 69999999999999999999999999999999 8 9999999888888
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCcc--chhhhhHHHHHHHhhhhccCCCC
Q psy10046 736 GVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLD--RFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 736 ~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~--~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+++.+++.....+...+.+...+.+++.|...+...+++.|.+|++ +|.+++++.++..++|++++|.+
T Consensus 87 ~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l 157 (493)
T PRK15462 87 AIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA 157 (493)
T ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH
Confidence 8776655421222222333444455666777777888999999875 79999999999999999998865
No 194
>TIGR00898 2A0119 cation transport protein.
Probab=98.75 E-value=2.7e-07 Score=107.30 Aligned_cols=142 Identities=15% Similarity=0.148 Sum_probs=107.4
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcH--HHHHHHHHHHHHHHHH
Q psy10046 190 LNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTI--EHMYLTFGLLAGIGLA 267 (805)
Q Consensus 190 ~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~--~~l~i~~R~l~G~g~g 267 (805)
...++.+. .+...+..+...++.++.++++||+|||+.++++.++.+++.++..+.++. +..++ +-++.+++.+
T Consensus 350 ~~~~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~ 425 (505)
T TIGR00898 350 LGNLGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTA-LAVLGKFGIT 425 (505)
T ss_pred ccccCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHH-HHHHHHHHHH
Confidence 34455443 233445566777888999999999999999999999988888887776543 33323 3466677777
Q ss_pred HHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 268 LSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 268 ~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
..++....+..+.+| +.|+.++|+..+...+|.+++|++.+ + ...++...+++.+++.++..++.+++
T Consensus 426 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l 494 (505)
T TIGR00898 426 SAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFL 494 (505)
T ss_pred HHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcC
Confidence 778888888889998 66999999999999999999999998 3 44567778888777776666655544
No 195
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.74 E-value=2.5e-08 Score=115.25 Aligned_cols=144 Identities=13% Similarity=0.064 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHh---cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHH
Q psy10046 659 HFLLVSISTILLFTWFVIPYFYLTDFVTN---QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGC 735 (805)
Q Consensus 659 ~~~~~~i~~~~~~~~~~~~~~~lp~~~~~---~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~ 735 (805)
.++.+++..++-.++++....++|.|+++ .|++..+++.+++.+.++..++.+++|+++||. +|||+++.++.++.
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~-~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRV-WGTKKTMVLGGIVL 89 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhh-cchHHHHHHHHHHH
Confidence 34555556666678888888999999876 699999999999999999999999999999982 49999999999998
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCcc---chhhhhHHHHHHHhhhhccCCCC
Q psy10046 736 GVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLD---RFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 736 ~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~---~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+++.+++. ...+++.+++..++.|++.|...+...+++++.++++ +|+.++++.++..++|+++||++
T Consensus 90 ~~g~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l 160 (475)
T TIGR00924 90 MLGHFMLA-MSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLL 160 (475)
T ss_pred HHHHHHHH-hcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHH
Confidence 88887776 3455666666777889999988999999999999865 48899999999999999999865
No 196
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.74 E-value=2.6e-07 Score=118.46 Aligned_cols=145 Identities=10% Similarity=0.013 Sum_probs=113.2
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc-------------------
Q psy10046 188 EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS------------------- 248 (805)
Q Consensus 188 ~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a------------------- 248 (805)
++.+.+|.+...++++.+++.++.++|.++.|+++++.++++.+.++.++.+++.+..++.
T Consensus 251 ~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 330 (1140)
T PRK06814 251 LAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLS 330 (1140)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhc
Confidence 3445689999999999999999999999999999998887776666655555555444432
Q ss_pred -CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhh-ccchHHHHHHHHH
Q psy10046 249 -RTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLIS-EYGWRGTVLLLSG 325 (805)
Q Consensus 249 -~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~-~~gWr~~f~i~~~ 325 (805)
.+.+.+++ .-++.|++.+...+...+++.+..| +.||+++|+.+++..+|..+++++++.+.. ..++.+.|++.++
T Consensus 331 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 331 KRHGWRILI-DLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred ccccHHHHH-HHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 56666655 4688899999888888888888887 679999999999999999999999998874 4577777776665
Q ss_pred HHHHHHHH
Q psy10046 326 TFFNLCVC 333 (805)
Q Consensus 326 ~~~~~~i~ 333 (805)
+.++.+++
T Consensus 410 ~~~~~~~~ 417 (1140)
T PRK06814 410 ANLIVAIL 417 (1140)
T ss_pred HHHHHHHH
Confidence 54444433
No 197
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.73 E-value=2.8e-08 Score=110.12 Aligned_cols=141 Identities=18% Similarity=0.182 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhHHH-HHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHH
Q psy10046 659 HFLLVSISTILLFTWFVIPYFYLTD-FVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGV 737 (805)
Q Consensus 659 ~~~~~~i~~~~~~~~~~~~~~~lp~-~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i 737 (805)
.+|..++..++.+........++|. +.++.|++..+.+++.+...++.+++.++.|+++|| +|||+++.++.++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~i 79 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDK--FGPRYTTTLSLLLLAI 79 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHH
Confidence 3556666666667777777788886 445799999999999999999999999999999999 9999999999999888
Q ss_pred HHhhhhhhhh-hHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 738 STALMPLFAT-NYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 738 ~~l~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
+.+++. ... +++.+++..++.|++.+ .+.....++.+.+|+++|+.+.++...+..+|..+++.
T Consensus 80 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 144 (366)
T TIGR00886 80 PCLWAG-LAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQF 144 (366)
T ss_pred HHHHHH-HHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHH
Confidence 887776 455 77777777888888754 45566778899999999999999998777776665543
No 198
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.71 E-value=2.1e-08 Score=109.91 Aligned_cols=137 Identities=20% Similarity=0.293 Sum_probs=115.0
Q ss_pred HHHHHHHHhhhhhhhhHH-HHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhh
Q psy10046 665 ISTILLFTWFVIPYFYLT-DFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMP 743 (805)
Q Consensus 665 i~~~~~~~~~~~~~~~lp-~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~ 743 (805)
++.++...........+| .+.++.|.+..+.+++.+...++..++.++.|+++|| +|||+++.++.++.+++.+...
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDR--FGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHH--S-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCeeeEeehhhhhhhHHHHhh
Confidence 344555555555666777 5556689999999999999999999999999999999 9999999999999888844444
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 744 LFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 744 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+.++.+.+++..++.|++.+...+....++.+.+|+++|+.++|+......+|.++||.+
T Consensus 81 -~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l 140 (352)
T PF07690_consen 81 -FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLL 140 (352)
T ss_dssp -HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccch
Confidence 335666888888999999999999999999999999999999999999999999998764
No 199
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.71 E-value=4.9e-07 Score=98.87 Aligned_cols=163 Identities=17% Similarity=0.148 Sum_probs=131.2
Q ss_pred hHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHH
Q psy10046 175 GDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHM 254 (805)
Q Consensus 175 ~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l 254 (805)
.++.....+....+-..++|++..+..++.....+..++|++++|+|.||+|.|++++++++++.+.++..-+...-..+
T Consensus 265 ~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f 344 (438)
T COG2270 265 IDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDF 344 (438)
T ss_pred HhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHH
Confidence 44555444333334456999999999999999999999999999999999999999999999999988887776665555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc-hHHHHHHHHHHHHHHHH
Q psy10046 255 YLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG-WRGTVLLLSGTFFNLCV 332 (805)
Q Consensus 255 ~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g-Wr~~f~i~~~~~~~~~i 332 (805)
.+ +.++.|++.|+.++..-++.++..| ++-++.+|++....-.+..+||++.+.+.+..| -|..+....++.++.++
T Consensus 345 ~i-~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~ 423 (438)
T COG2270 345 WI-LGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLL 423 (438)
T ss_pred HH-HHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHh
Confidence 45 5789999999999999999998887 668999999999999999999999999888654 56666655555555555
Q ss_pred HHHhcc
Q psy10046 333 CGAIMR 338 (805)
Q Consensus 333 ~~~~~~ 338 (805)
+.+...
T Consensus 424 ~L~~v~ 429 (438)
T COG2270 424 LLLRVK 429 (438)
T ss_pred hEEeec
Confidence 444443
No 200
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.69 E-value=4.4e-07 Score=104.48 Aligned_cols=157 Identities=10% Similarity=-0.019 Sum_probs=103.7
Q ss_pred HHHHHHHHHH-HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHH--------HHHHHHHH--HHHHHHHHh-
Q psy10046 180 FSFGLLYIEF-LNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSM--------TIVAGIIS--GVGFVLSCF- 247 (805)
Q Consensus 180 ~~~~~~~p~i-~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~v--------lii~~~l~--~i~~i~~a~- 247 (805)
+.+...+|.+ .+.+|.+..+.++..++..++..++.++.|+++||+++|+. +..+..+. ++..++...
T Consensus 278 ~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (465)
T TIGR00894 278 TILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYL 357 (465)
T ss_pred HHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3334445555 46689999999999999999999999999999998764421 11111111 111111222
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc---chHHHHHHHH
Q psy10046 248 SRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEY---GWRGTVLLLS 324 (805)
Q Consensus 248 a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~---gWr~~f~i~~ 324 (805)
..+....++ +-++.|++.+...+.......+..|+.+|.++++.+.+..+|+.++|.+.+++.+.. +|+..|++.+
T Consensus 358 ~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~ 436 (465)
T TIGR00894 358 SAAFYLTII-ILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMA 436 (465)
T ss_pred CCchHHHHH-HHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHH
Confidence 233333322 224444444444444444444777889999999999999999999999999987643 4888998888
Q ss_pred HHHHHHHHHHHhc
Q psy10046 325 GTFFNLCVCGAIM 337 (805)
Q Consensus 325 ~~~~~~~i~~~~~ 337 (805)
++.++..++..++
T Consensus 437 ~~~~i~~i~~~~~ 449 (465)
T TIGR00894 437 FVNILCVIFYLIF 449 (465)
T ss_pred HHHHHHHHHeeee
Confidence 7777666555544
No 201
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.69 E-value=5.8e-08 Score=109.01 Aligned_cols=138 Identities=15% Similarity=0.011 Sum_probs=115.9
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhh
Q psy10046 664 SISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMP 743 (805)
Q Consensus 664 ~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~ 743 (805)
.+..++...++......+|.+.++.|.+..+.++..+.+.++..++.++.|+++|| +|||+.+.++.++.+++.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr--~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 9 FALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADR--SGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHH--hCChHHHHHHHHHHHHHHHHHH
Confidence 34444555555566678898888999999999999999999999999999999999 9999999998888888877766
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 744 LFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 744 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
..++.+.+++..++.|++.+...+..+.++.+.+++++|+.+.|+.+....+|.+++|.+
T Consensus 87 -~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i 146 (392)
T PRK10473 87 -LAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVL 146 (392)
T ss_pred -HhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666677777888988888888889999999999999999999999988888887754
No 202
>KOG2504|consensus
Probab=98.69 E-value=1.8e-07 Score=108.06 Aligned_cols=159 Identities=17% Similarity=0.151 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhC--ChHHHHHHHHHHHHHHHHHHhcCcHHHHH
Q psy10046 178 IAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFG--CRSMTIVAGIISGVGFVLSCFSRTIEHMY 255 (805)
Q Consensus 178 ~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~G--rr~vlii~~~l~~i~~i~~a~a~~~~~l~ 255 (805)
......+++|.+.++++.+..+++.+.++..+...++.++.|+++|+.. ++.++.+++++.+++.+.++++++++.++
T Consensus 313 g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~ 392 (509)
T KOG2504|consen 313 GFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLI 392 (509)
T ss_pred HHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3345556678888899999999999999999999999999999999988 55678888888888888999999999986
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHH
Q psy10046 256 LTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG-WRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 256 i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g-Wr~~f~i~~~~~~~~~i~ 333 (805)
+ +-++.|++.|........++.++.. ++...+.|+...+.+++..+||+++|.+.+..| |...|++.++..++..++
T Consensus 393 ~-~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~ 471 (509)
T KOG2504|consen 393 V-FSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVL 471 (509)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHH
Confidence 6 5689999999888777777778886 788999999999999999999999999988877 999999998887777766
Q ss_pred HHhc
Q psy10046 334 GAIM 337 (805)
Q Consensus 334 ~~~~ 337 (805)
.++.
T Consensus 472 ~~~~ 475 (509)
T KOG2504|consen 472 LLIL 475 (509)
T ss_pred HHHh
Confidence 6554
No 203
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.67 E-value=6.3e-08 Score=109.75 Aligned_cols=143 Identities=13% Similarity=0.012 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHH
Q psy10046 660 FLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVST 739 (805)
Q Consensus 660 ~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~ 739 (805)
++.+++.+++..+........+|.+.+++|.+..+++++.+...++..++.+..|++.|| +|+|+++.++.++.+++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r--~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKK--LSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHHHH
Confidence 555566666666666666677888888899999999999999999999999999999999 999999999999988887
Q ss_pred hhhhhh--hhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 740 ALMPLF--ATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 740 l~~~~~--~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+++... .++++.+++..++.|++.|...+....++.+..|+++++...++.+.+.++|..+||.+
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i 149 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVV 149 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765322 34677778888899999999999989999999999999999999999999999988765
No 204
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.65 E-value=8.1e-07 Score=103.30 Aligned_cols=127 Identities=18% Similarity=0.176 Sum_probs=104.6
Q ss_pred HHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc---CcHHHHHHHHHH
Q psy10046 185 LYI-EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS---RTIEHMYLTFGL 260 (805)
Q Consensus 185 ~~p-~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a---~~~~~l~i~~R~ 260 (805)
+.| +++..+|.+..++++....+.++..++.++.|++.||+|+|+++.+++++.+++.++..+. .+.+..++ .-+
T Consensus 281 ~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~-~~~ 359 (495)
T PRK14995 281 LMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWG-LMA 359 (495)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHH-HHH
Confidence 444 4455689999999999999999999999999999999999999998988888777655432 35554434 468
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhh
Q psy10046 261 LAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLIS 312 (805)
Q Consensus 261 l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~ 312 (805)
+.|+|.|...+.....+....| ++++.+.+++.....+|..+|+.+.+.+.+
T Consensus 360 l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 360 LLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999888777777776666 779999999999999999999999998765
No 205
>KOG4686|consensus
Probab=98.64 E-value=8.7e-07 Score=91.20 Aligned_cols=170 Identities=16% Similarity=0.186 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH-
Q psy10046 162 WMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGV- 240 (805)
Q Consensus 162 w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i- 240 (805)
|.+.++++ ++...+.-....+. ..+.+.||+|+..++.+.+......++..+++|.++||+|++.+.+.+.++..+
T Consensus 267 w~~~iicv-~yyva~fPFi~lg~--~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~ 343 (459)
T KOG4686|consen 267 WVLVIICV-LYYVAWFPFITLGP--MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLL 343 (459)
T ss_pred HHHHHHHH-HHHHHHHHHhhhhH--HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHH
Confidence 55544443 33333333333433 467899999999999999999999999999999999999999887776555444
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc---h
Q psy10046 241 GFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG---W 316 (805)
Q Consensus 241 ~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g---W 316 (805)
+-.+..|.. +.-++. ..+.|+..+.........++...| ++.|++.|..+...++|-++.|+++|+++++-| |
T Consensus 344 ~H~~l~Ft~--lsPy~~-m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~ 420 (459)
T KOG4686|consen 344 GHSGLFFTF--LSPYTS-MTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDN 420 (459)
T ss_pred HhhhHHhhh--ccHHHH-HHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhh
Confidence 333333331 111233 356788777666556666777777 669999999999999999999999999998654 4
Q ss_pred HHHHHH-HHHHHHHHHHHHHhc
Q psy10046 317 RGTVLL-LSGTFFNLCVCGAIM 337 (805)
Q Consensus 317 r~~f~i-~~~~~~~~~i~~~~~ 337 (805)
--.|.+ .+.+++....+.+.+
T Consensus 421 le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 421 LEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhhe
Confidence 444443 333444433333333
No 206
>PRK09848 glucuronide transporter; Provisional
Probab=98.62 E-value=1.5e-06 Score=99.60 Aligned_cols=130 Identities=15% Similarity=0.211 Sum_probs=99.8
Q ss_pred HHHHH-HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHH
Q psy10046 186 YIEFL-NEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR--TIEHMYLTFGLLA 262 (805)
Q Consensus 186 ~p~i~-~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~--~~~~l~i~~R~l~ 262 (805)
.+++. ..+|.+....++......++..++.++++++.+|+|+|+++.++.++.+++.++..+.+ +++.+++ ..++.
T Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~-~~~l~ 329 (448)
T PRK09848 251 SLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALV-ALAIA 329 (448)
T ss_pred heeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHH-HHHHH
Confidence 34443 34676665555555555677888999999999999999999999998888877776654 4555544 35788
Q ss_pred HHHHHHHHHHHHHHHhhhcc-c-------chhHHHHHHHHHhhHHHhhHHHHHHHHhhccch
Q psy10046 263 GIGLALSYVTAVVSIAFWFE-K-------KRGLACSLGSTGTGFGTTVYAPITSYLISEYGW 316 (805)
Q Consensus 263 G~g~g~~~~~~~~~l~~~~p-~-------~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gW 316 (805)
|+|.+...+...++.++..+ + ++|...+++..+..+|..+|+.+.+.+.+..|+
T Consensus 330 g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 330 SIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999888888888776654 2 359999999999999999999999988765554
No 207
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.62 E-value=2.6e-06 Score=89.65 Aligned_cols=146 Identities=20% Similarity=0.313 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHhCCCh--hHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCc--HHHHHHH
Q psy10046 182 FGLLYIEFLNEFGASK--SKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRT--IEHMYLT 257 (805)
Q Consensus 182 ~~~~~p~i~~~~g~s~--~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~--~~~l~i~ 257 (805)
.....+.+..+++.+. ...++..+.+.++..++.+++|.++||+|||+.++++...+.++.+++++..+ .+.+++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 99 (338)
T COG0477 21 LSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLI- 99 (338)
T ss_pred HHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHH-
Confidence 4445567777777666 47899999999999999999999999999998888888776666777777776 666645
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccc--chhHHHHHHHH-HhhHHHhhHHHHHHHHhhc--cchHHHHHHHHHHHH
Q psy10046 258 FGLLAGIGLALSYVTAVVSIAFWFEK--KRGLACSLGST-GTGFGTTVYAPITSYLISE--YGWRGTVLLLSGTFF 328 (805)
Q Consensus 258 ~R~l~G~g~g~~~~~~~~~l~~~~p~--~rg~a~gi~~~-~~~lG~~lgp~i~~~l~~~--~gWr~~f~i~~~~~~ 328 (805)
.|++.|++.+...+...+++.++.|+ +|+...++... ...+|.++++.+++.+... .+||+.|++......
T Consensus 100 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (338)
T COG0477 100 LRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGL 175 (338)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 69999999999999999999999985 78999999888 5888888988887777654 679996666554443
No 208
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.62 E-value=1.5e-07 Score=106.90 Aligned_cols=143 Identities=10% Similarity=0.093 Sum_probs=115.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHH-hcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHH
Q psy10046 655 FLELHFLLVSISTILLFTWFVIPYFYLTDFVT-NQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLI 733 (805)
Q Consensus 655 l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~-~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~ 733 (805)
..++.+++..+..++.+...+.+....+.+.+ ++|++..+.+++.++..++..++++..|++.|| +|.|+++.++.+
T Consensus 31 ~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr--~G~R~v~~~~~l 108 (462)
T PRK15034 31 IARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPI--FGGRRWTVFSTA 108 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHH
Confidence 34456777666666666666655555666555 689999999999999999999999999999999 999999999998
Q ss_pred HHHHHHhhhhhh----hhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhcc
Q psy10046 734 GCGVSTALMPLF----ATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLV 800 (805)
Q Consensus 734 ~~~i~~l~~~~~----~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~i 800 (805)
+.++..+++.+. .++++.+++..++.|++ +..++.....+++.+|++++|+++|+......+|..+
T Consensus 109 l~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l 178 (462)
T PRK15034 109 ILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSV 178 (462)
T ss_pred HHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHH
Confidence 888888776632 16788888889999997 7788888899999999999999999996555555543
No 209
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.61 E-value=5.7e-06 Score=93.22 Aligned_cols=151 Identities=21% Similarity=0.262 Sum_probs=116.5
Q ss_pred HHHHHHHhC-CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHH---HH
Q psy10046 186 YIEFLNEFG-ASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS-RTIEHMYLTF---GL 260 (805)
Q Consensus 186 ~p~i~~~~g-~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a-~~~~~l~i~~---R~ 260 (805)
.+.+.++.| .+....+.+.++..++=.+.-.+.+++..|+|.|++++++++.+++=..+.++. ++.+..++.. -+
T Consensus 230 ~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~ 309 (400)
T PF03825_consen 230 FSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQL 309 (400)
T ss_pred HHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHh
Confidence 345577777 677777877788888888888899999999999999999999999988888877 5544432211 24
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHH-HhhHHHhhHHHHHHHHhhccchHH------HHHHHHHHHHHHHH
Q psy10046 261 LAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGST-GTGFGTTVYAPITSYLISEYGWRG------TVLLLSGTFFNLCV 332 (805)
Q Consensus 261 l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~-~~~lG~~lgp~i~~~l~~~~gWr~------~f~i~~~~~~~~~i 332 (805)
+.|+..+..+.+...++.+..| +.|+++.+++.. ..++|.++|..++|++.+++|-+. .+.+.+++.+++.+
T Consensus 310 lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~ 389 (400)
T PF03825_consen 310 LHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILV 389 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999888 569999999876 578999999999999999877443 34444444444444
Q ss_pred HHHh
Q psy10046 333 CGAI 336 (805)
Q Consensus 333 ~~~~ 336 (805)
+.++
T Consensus 390 ~f~~ 393 (400)
T PF03825_consen 390 LFVI 393 (400)
T ss_pred HHHh
Confidence 4433
No 210
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.61 E-value=1.4e-07 Score=109.28 Aligned_cols=146 Identities=15% Similarity=0.100 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHH
Q psy10046 658 LHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCG 736 (805)
Q Consensus 658 ~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~ 736 (805)
+.++.+++..+.--++++.+..+++.|+++ .|++..+++++...+.+...+..+++|+++|| ++|||+++.++.++.+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr-~~G~r~~~~~g~~~~~ 92 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDH-LLGTKRTIVLGAIVLA 92 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhh-ccchHHHHHHHHHHHH
Confidence 345566666667778888888899999875 89999999998888888888888899999997 2799999999999998
Q ss_pred HHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCcc--chhhhhHHHHHHHhhhhccCCCC
Q psy10046 737 VSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLD--RFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 737 i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~--~~~~a~gl~~~~~~ig~~igp~i 804 (805)
++.+.+.+.......+++..++.|++.|...+...+++.+.+|++ +|+.++++.++..++|.++||.+
T Consensus 93 ~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l 162 (489)
T PRK10207 93 IGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL 162 (489)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH
Confidence 887776633222333445677788999999999999999999876 55789999999999999988764
No 211
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.61 E-value=0.00019 Score=81.02 Aligned_cols=142 Identities=18% Similarity=0.062 Sum_probs=92.2
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHH
Q psy10046 655 FLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIG 734 (805)
Q Consensus 655 l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~ 734 (805)
++++.|+..+-..++++... .+......|+...|+++...+.+-+...+.++.|.++..++.+| +|..+.-.+++..
T Consensus 256 ~~q~vflas~alalLY~TVL-sf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r--iGlvr~G~~~l~~ 332 (432)
T PF06963_consen 256 FRQPVFLASFALALLYFTVL-SFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR--IGLVRAGLWSLWW 332 (432)
T ss_pred HhCHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcchhhHHHHHHH
Confidence 45565555544444444433 34567778888899999999999999999999999999999999 8877665544433
Q ss_pred HHH----HHhhhhhhhh-----hHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhc
Q psy10046 735 CGV----STALMPLFAT-----NYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNL 799 (805)
Q Consensus 735 ~~i----~~l~~~~~~~-----~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~ 799 (805)
..+ +...++.... +...++..+++-=+|.=++=-+..-++.|.+|.++||+..|+-+..+++-.+
T Consensus 333 q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~l 406 (432)
T PF06963_consen 333 QWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFEL 406 (432)
T ss_pred HHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHH
Confidence 222 2222221121 1222333333333444444445667889999999999999998877766543
No 212
>PRK11043 putative transporter; Provisional
Probab=98.60 E-value=4.9e-06 Score=93.71 Aligned_cols=134 Identities=15% Similarity=0.000 Sum_probs=99.9
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH---HHh--cCcHHHHHHHH
Q psy10046 184 LLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVL---SCF--SRTIEHMYLTF 258 (805)
Q Consensus 184 ~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~---~a~--a~~~~~l~i~~ 258 (805)
...|.+.+++|.+..++++....+.++..++.++.+++.||+|+|+.+....++.+++.+. ..+ .++.+.+++ .
T Consensus 224 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 302 (401)
T PRK11043 224 TGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLI-P 302 (401)
T ss_pred HHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHH-H
Confidence 3456777889999999999888889999999999999999999988765554444443322 222 344444434 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHH
Q psy10046 259 GLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRG 318 (805)
Q Consensus 259 R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~ 318 (805)
-++.|++.+..++.......+..|+++|++++++......+..+++.+.+.+.+......
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHH
Confidence 467788888888887777667678889999999998888888888888888876443333
No 213
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.59 E-value=1.1e-07 Score=105.93 Aligned_cols=125 Identities=15% Similarity=0.181 Sum_probs=110.9
Q ss_pred hhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHH
Q psy10046 677 PYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTC 756 (805)
Q Consensus 677 ~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~ 756 (805)
....+|.+.++.|.++.+.+++.+...++..++.+++|+++|| ++||+++..+.++.+++.+++. ...+++.+++..
T Consensus 10 ~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~--~g~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~ 86 (377)
T PRK11102 10 YLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADS--FGRKPVILGGTLVFALAAVACA-LAQTIDQLIYMR 86 (377)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhh--cCChHHHHHHHHHHHHHHHHHH-HHccHHHHHHHH
Confidence 3456788888899999999999999999999999999999999 9999999999988888888776 456777778888
Q ss_pred HHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 757 LSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 757 ~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
++.|++.+...+....++.+.+++++|+.++|+.+....+|.+++|.+
T Consensus 87 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 134 (377)
T PRK11102 87 FLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPII 134 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999988888889999999999999999999999999999888764
No 214
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.56 E-value=1.7e-07 Score=105.05 Aligned_cols=121 Identities=16% Similarity=0.211 Sum_probs=110.7
Q ss_pred hHHHHHHhcCCChhh-HHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHH
Q psy10046 680 YLTDFVTNQGLSKEE-ATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLS 758 (805)
Q Consensus 680 ~lp~~~~~~G~s~~~-a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l 758 (805)
-.|.+.+++|+++.+ .+.+.+.+..+-+++.+.+|+++|| +|.|+++.++.+..+++.+++. +.++...+.+.-++
T Consensus 48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDr--lG~K~vL~l~~l~Wsl~t~L~~-fa~Sl~~L~i~R~l 124 (511)
T TIGR00806 48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY--LRYKPVLVLQALSFVCVWLLLL-LGTSVWHMQLMEVF 124 (511)
T ss_pred HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 345555579999999 9999999999999999999999999 9999999999999999988888 57788889999999
Q ss_pred HhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 759 FGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 759 ~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+|++.|+.+ ....++...+|+++|+++.|+.+....+|.++++++
T Consensus 125 lGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L 169 (511)
T TIGR00806 125 YSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVL 169 (511)
T ss_pred HHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 888999999999999999999999999999998875
No 215
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.56 E-value=2.8e-07 Score=103.57 Aligned_cols=131 Identities=11% Similarity=0.043 Sum_probs=108.5
Q ss_pred HHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhHH
Q psy10046 671 FTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNYW 750 (805)
Q Consensus 671 ~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~ 750 (805)
..........+|.+.++.|.++.+.+++.+...++..++.++.|+++|| ++||+.+.++.++.+++.+.+. ..++++
T Consensus 21 ~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr--~grr~~~~~~~~~~~~~~~~~~-~~~~~~ 97 (394)
T PRK11652 21 QMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDR--VGRRPVILVGMSIFILGTLVAL-FAHSLT 97 (394)
T ss_pred HHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh--cCChHHHHHHHHHHHHHHHHHH-HHccHH
Confidence 3333334445777888899999999999999999999999999999999 9999999988888887777665 456777
Q ss_pred HHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 751 ALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 751 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
.+++..++.|++.+...+....+..+.++.++++.+.++.++...+|.++||.+
T Consensus 98 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i 151 (394)
T PRK11652 98 VLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLI 151 (394)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788888888988887777777788888888999999999988888888877764
No 216
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.55 E-value=6.3e-06 Score=88.51 Aligned_cols=174 Identities=14% Similarity=0.117 Sum_probs=134.6
Q ss_pred chhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-ChHHHHHHHHH
Q psy10046 159 GWGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFG-CRSMTIVAGII 237 (805)
Q Consensus 159 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~G-rr~vlii~~~l 237 (805)
+..|.+.+...+-. ...|+.-..+|.+..|-|+|..+.|+..++..+......+....+.+|.. +|+..++.+++
T Consensus 208 ~~aW~vtLfmGlqS----~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 208 PLAWQVTLFMGLQS----LLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred chhHHHHHHHHhhH----HHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 34465544333322 23344444579999999999999999999999999999999999999755 77888888888
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--cchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc-
Q psy10046 238 SGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE--KKRGLACSLGSTGTGFGTTVYAPITSYLISEY- 314 (805)
Q Consensus 238 ~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p--~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~- 314 (805)
+.++.+.+.+.+....++- -++.|+|.|.+++.+...+..-.. ++-+...++.+....+=..+||.+.|++.+..
T Consensus 284 ~l~G~~G~~~~P~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 284 MLVGLVGLLLAPGQLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred HHHHHHHHHHhhhhHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 8888888878766555423 378999999999999999885553 55677777777777777889999999999875
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcc
Q psy10046 315 GWRGTVLLLSGTFFNLCVCGAIMR 338 (805)
Q Consensus 315 gWr~~f~i~~~~~~~~~i~~~~~~ 338 (805)
+|+..++..+...+++.++.+..-
T Consensus 362 sw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 362 SWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred ChHHHHHHHHHHHHHHHHHHhhcc
Confidence 599998888887777777766653
No 217
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.54 E-value=5.5e-06 Score=92.53 Aligned_cols=150 Identities=14% Similarity=0.071 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC---hHHHHH-HHHHHHHHHHHHHhcCcHHHH
Q psy10046 179 AFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGC---RSMTIV-AGIISGVGFVLSCFSRTIEHM 254 (805)
Q Consensus 179 ~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Gr---r~vlii-~~~l~~i~~i~~a~a~~~~~l 254 (805)
.+.+...+|.+.++.|.+.. .+...++..++..++ .++++||+.| |+.... ..++.++..++.++..+....
T Consensus 208 ~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~ 283 (368)
T TIGR00903 208 FDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLAL 283 (368)
T ss_pred HHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHH
Confidence 33444566777788888754 555555555544444 4666776543 444333 344444444444555544444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q psy10046 255 YLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 255 ~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~ 333 (805)
++ +-++.|++....++...++.++.+| +.||+++|+.+....+|.+++|++.+.+.. |-...|.+.++..++..+.
T Consensus 284 ~~-~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~ 360 (368)
T TIGR00903 284 FA-FIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAI 360 (368)
T ss_pred HH-HHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 33 3456677777777777788889998 579999999999999999999999988874 7778888887776666665
Q ss_pred HH
Q psy10046 334 GA 335 (805)
Q Consensus 334 ~~ 335 (805)
.+
T Consensus 361 ~~ 362 (368)
T TIGR00903 361 AL 362 (368)
T ss_pred HH
Confidence 54
No 218
>KOG1330|consensus
Probab=98.54 E-value=1.4e-07 Score=103.78 Aligned_cols=142 Identities=17% Similarity=0.214 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHH
Q psy10046 659 HFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVS 738 (805)
Q Consensus 659 ~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~ 738 (805)
...++++..++...--+.....++..-..++.++...|++...+.+..+++++++|++.|| ++|++++.++..+.+++
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadr--yNR~~v~~vG~~iW~~A 111 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADR--YNRKRVIAVGIFIWTLA 111 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhh--cCcceEEeeHHHHHHHH
Confidence 3445555555555544444444444444579999999999999999999999999999999 99999999999999999
Q ss_pred HhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 739 TALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 739 ~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
.++-. +...+|.+.++=.+.|+|-+...++.+.+++|.++.++|+..+|++++...+|+.+|-+
T Consensus 112 v~~~~-fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~v 175 (493)
T KOG1330|consen 112 VFASG-FSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYV 175 (493)
T ss_pred HHHHH-HHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEE
Confidence 98887 45889999999999999999999999999999999999999999999999888887644
No 219
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.54 E-value=2.6e-07 Score=104.83 Aligned_cols=127 Identities=11% Similarity=0.006 Sum_probs=107.3
Q ss_pred hhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHH
Q psy10046 675 VIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLF 754 (805)
Q Consensus 675 ~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~ 754 (805)
.....-+|.+.++.|.+...+++.++.+.++..++.++.|+++|| +|||+++..+.++.+++.++.. ..++++.+++
T Consensus 33 ~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr--~Grr~~l~~~~~~~~~~~~~~~-~a~~~~~l~~ 109 (413)
T PRK15403 33 DLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDR--IGRRPVLITGALIFTLACAATL-FTTSMTQFLI 109 (413)
T ss_pred HhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHH--cCchHHHHHHHHHHHHHHHHHH-HcCCHHHHHH
Confidence 333344556667789999999999999999999999999999999 9999999999888888877766 4667888888
Q ss_pred HHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 755 TCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 755 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
.-++.|++.+...+..+.++.+.++.++++.++|+.+....+|.++||.+
T Consensus 110 ~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 159 (413)
T PRK15403 110 ARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLS 159 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888776666677888899999999999999999999999888765
No 220
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.52 E-value=3.7e-06 Score=97.21 Aligned_cols=129 Identities=17% Similarity=0.138 Sum_probs=96.3
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-----cCcHHHHHHHHHHH
Q psy10046 187 IEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCF-----SRTIEHMYLTFGLL 261 (805)
Q Consensus 187 p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~-----a~~~~~l~i~~R~l 261 (805)
+++.+...-+....+++.++..++..++.+++++++||+|+|+.+++++++.+++.+...+ ..+.+.+++ .-++
T Consensus 255 ~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~l 333 (473)
T PRK10429 255 IYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVI-AGIL 333 (473)
T ss_pred eeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHH-HHHH
Confidence 3444444335566777777777889999999999999999999999888776666555432 234555544 4578
Q ss_pred HHHHHHHHHHHHHHHHhhhcc--------cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccch
Q psy10046 262 AGIGLALSYVTAVVSIAFWFE--------KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGW 316 (805)
Q Consensus 262 ~G~g~g~~~~~~~~~l~~~~p--------~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gW 316 (805)
.|++.+...+...+++++..+ ++.|..+++...+.-+|..+++.+.|++.+..|+
T Consensus 334 ~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 334 LNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 889988888888888886643 2256688999999999999999999998875544
No 221
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.51 E-value=2.8e-05 Score=86.23 Aligned_cols=129 Identities=22% Similarity=0.160 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy10046 204 GSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEK 283 (805)
Q Consensus 204 ~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~ 283 (805)
.-+-.+...+..+++.++..|+..+.=+.+..++.+++.++.+++++.+.-+++ -++.+++.|..-..-..+.+ ++++
T Consensus 65 lladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~G-v~las~ssg~GE~tfL~lt~-~y~~ 142 (402)
T PF02487_consen 65 LLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLG-VVLASLSSGLGEVTFLSLTH-FYGK 142 (402)
T ss_pred HHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHH-HHHHhhhhhhhHHHHHHHHH-hcCc
Confidence 333344455555666677788775555566667888889999999998876564 57778877766655555443 4443
Q ss_pred chhHHHHHHHHHhhHHHhhHHHHHHHHhhccch--HHHHHHHHHHHHHHHHHHHhcc
Q psy10046 284 KRGLACSLGSTGTGFGTTVYAPITSYLISEYGW--RGTVLLLSGTFFNLCVCGAIMR 338 (805)
Q Consensus 284 ~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gW--r~~f~i~~~~~~~~~i~~~~~~ 338 (805)
..++.|..+.+.++++|+.....+.. .|+ |..+++...+.++.++..++..
T Consensus 143 ---~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L 195 (402)
T PF02487_consen 143 ---SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLL 195 (402)
T ss_pred ---cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 35788999999999999988877766 555 6677776666555555444443
No 222
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.47 E-value=4.7e-06 Score=92.18 Aligned_cols=113 Identities=17% Similarity=0.132 Sum_probs=90.0
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc-----------CcH
Q psy10046 184 LLYIEFLNEFGASKSKTAWIGSLFM-AVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS-----------RTI 251 (805)
Q Consensus 184 ~~~p~i~~~~g~s~~~~~l~~s~~~-lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a-----------~~~ 251 (805)
...|.+.+++|.+..+++.+.+++. ++..++.+++|+++||+|||+.+++++++.+++..+..+. ++.
T Consensus 230 ~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (356)
T TIGR00901 230 VLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHL 309 (356)
T ss_pred HHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchH
Confidence 3445566669999999998887766 6788999999999999999999888888887776655442 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhh
Q psy10046 252 EHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTG 297 (805)
Q Consensus 252 ~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~ 297 (805)
+.+++ +.++.|++.+...+...+++.+.+| ++||+.+|++++..+
T Consensus 310 ~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 310 LMLFL-TITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHH-HHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 54534 5688899999999999999999887 779999999887654
No 223
>KOG0569|consensus
Probab=98.45 E-value=1.2e-05 Score=91.54 Aligned_cols=159 Identities=13% Similarity=0.051 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc---CcHH-----
Q psy10046 181 SFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS---RTIE----- 252 (805)
Q Consensus 181 ~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a---~~~~----- 252 (805)
....+...+.++-|++..++.++.....+...+..+++..+.||+|||+.+++++.+..+..++.... .+..
T Consensus 288 ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 367 (485)
T KOG0569|consen 288 AIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLS 367 (485)
T ss_pred eeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 33444457888999999999999999999999999999999999999999999998888777665443 1111
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHH
Q psy10046 253 HMYLTFGLLAGIGLALS-YVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 253 ~l~i~~R~l~G~g~g~~-~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~ 330 (805)
.+.+++-++..++.+.. -|...-+.+|.+| ..|+.++++..+...++.++-......+.+..|= +.|.+..+.+++.
T Consensus 368 y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~ 446 (485)
T KOG0569|consen 368 YLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIF 446 (485)
T ss_pred HHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHH
Confidence 12233334444444433 3455556669998 6799999998888887777766666666666665 6677777777777
Q ss_pred HHHHHhccCC
Q psy10046 331 CVCGAIMRDP 340 (805)
Q Consensus 331 ~i~~~~~~~p 340 (805)
++..++..|.
T Consensus 447 ~i~~~~~lPE 456 (485)
T KOG0569|consen 447 LIYLYRYLPE 456 (485)
T ss_pred HHHHHHhCcc
Confidence 7777776654
No 224
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.44 E-value=4.9e-06 Score=94.84 Aligned_cols=128 Identities=19% Similarity=0.335 Sum_probs=107.0
Q ss_pred HHHHHH-hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHH
Q psy10046 187 IEFLNE-FGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR--TIEHMYLTFGLLAG 263 (805)
Q Consensus 187 p~i~~~-~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~--~~~~l~i~~R~l~G 263 (805)
+++.++ +|.+ ...+++..++.++..++.++++++++|+|+|+.+.++.++.+++.++..+.+ +.+.+++ .-++.|
T Consensus 249 ~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~l~g 326 (428)
T PF13347_consen 249 PYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLI-LFILAG 326 (428)
T ss_pred HHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHH-HHHHhH
Confidence 445544 5544 6778888899999999999999999999999999999999999999888875 7777766 468999
Q ss_pred HHHHHHHHHHHHHHhhhcc--------cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccch
Q psy10046 264 IGLALSYVTAVVSIAFWFE--------KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGW 316 (805)
Q Consensus 264 ~g~g~~~~~~~~~l~~~~p--------~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gW 316 (805)
++.+..++...+++++..+ ++.|..+|++....-+|..+++.+.+.+....|+
T Consensus 327 i~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 327 IGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 9999999888888887664 2258999999999999999999999988765443
No 225
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.43 E-value=1.2e-05 Score=87.66 Aligned_cols=158 Identities=13% Similarity=0.149 Sum_probs=127.4
Q ss_pred HHHHhHHHHHHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC
Q psy10046 171 INMAGDGIAFSFGLLYIEFLNE-FGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR 249 (805)
Q Consensus 171 ~~~~~~~~~~~~~~~~p~i~~~-~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~ 249 (805)
..|+-.|...+.+.+++.+..+ .|.+..+.....+.+..+.++|.++..++..|+-..+.+.+..++..+.++..++.+
T Consensus 244 ~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~ 323 (422)
T COG0738 244 AIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIG 323 (422)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444446666666666777777 788999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHH
Q psy10046 250 TIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFN 329 (805)
Q Consensus 250 ~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~ 329 (805)
+...++. -++.|++.+..+|...+....-.+++-.. .+..-....+|+++.|++.|++.+..|-...+.+...++.+
T Consensus 324 g~v~~~~--l~~ig~F~simfPTIfslal~~l~~~ts~-~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~l 400 (422)
T COG0738 324 GVVALYA--LFLIGLFNSIMFPTIFSLALKNLGEHTSV-GSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYL 400 (422)
T ss_pred ChHHHHH--HHHHHHHhHHHHHHHHHHHHhccCccccc-cceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 9888755 37889999999999999888777744332 34444556688999999999999999988887754444444
Q ss_pred HH
Q psy10046 330 LC 331 (805)
Q Consensus 330 ~~ 331 (805)
..
T Consensus 401 yV 402 (422)
T COG0738 401 YV 402 (422)
T ss_pred HH
Confidence 43
No 226
>KOG3764|consensus
Probab=98.43 E-value=5.5e-07 Score=97.23 Aligned_cols=149 Identities=8% Similarity=0.081 Sum_probs=120.8
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhC--ChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Q psy10046 188 EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFG--CRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIG 265 (805)
Q Consensus 188 ~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~G--rr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g 265 (805)
.+.+.+..+..+.++..--..+.++++..+.|.++||++ |-.....++++.++.+.+..+++++.++++ -++..|++
T Consensus 296 wm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~v-p~~~l~~~ 374 (464)
T KOG3764|consen 296 WMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWV-PNFGLGFG 374 (464)
T ss_pred HHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhh-hhHHHHHH
Confidence 356778866779999999999999999999999999999 645556667777777778889999999866 57777888
Q ss_pred HHHHHHHHHHHHhhhcc-c------chhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 266 LALSYVTAVVSIAFWFE-K------KRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 266 ~g~~~~~~~~~l~~~~p-~------~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
.+...+...-.+..... + --|...++...++.+|.++||.++|.+.+..|++|...+.++..++...+..++
T Consensus 375 i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 375 IGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 87776666666664442 2 258899999999999999999999999999999999999888777766655554
No 227
>PRK09669 putative symporter YagG; Provisional
Probab=98.42 E-value=2e-05 Score=90.28 Aligned_cols=119 Identities=9% Similarity=0.029 Sum_probs=90.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH-h-cCcHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10046 197 KSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSC-F-SRTIEHMYLTFGLLAGIGLALSYVTAV 274 (805)
Q Consensus 197 ~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a-~-a~~~~~l~i~~R~l~G~g~g~~~~~~~ 274 (805)
....+.+.....++..++.+++++++||+|+|+.+.++.++.++..+... + ..+.+.+++ ..++.|++.+...+...
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~ 341 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFA-LNILFNFIQNLTTPLQW 341 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 34445566677788888999999999999999999888876665443322 2 345655545 46889999999888888
Q ss_pred HHHhhhcc--------cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccch
Q psy10046 275 VSIAFWFE--------KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGW 316 (805)
Q Consensus 275 ~~l~~~~p--------~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gW 316 (805)
+++++..+ +..|...+++..+..+|..+|+.++|++.+..|+
T Consensus 342 am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 342 SMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88886653 1246778888889999999999999999876655
No 228
>KOG3762|consensus
Probab=98.36 E-value=2.5e-06 Score=95.41 Aligned_cols=148 Identities=16% Similarity=0.153 Sum_probs=130.5
Q ss_pred HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Q psy10046 189 FLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLAL 268 (805)
Q Consensus 189 i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~ 268 (805)
-.++++-.....|....+...+-.+.-++.++|.+++|+-+++.+++.++++=.+...+..|.|+.+. +-+++|+..+.
T Consensus 397 Hled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLP-ieilqgit~al 475 (618)
T KOG3762|consen 397 HLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLP-IEILQGITHAL 475 (618)
T ss_pred HHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheee-HHHHHHHHHHH
Confidence 35777777777887777888888888999999999999999999999999999999999999999866 68999999999
Q ss_pred HHHHHHHHHhhhcc-cchhHHHHHHHH-HhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 269 SYVTAVVSIAFWFE-KKRGLACSLGST-GTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 269 ~~~~~~~~l~~~~p-~~rg~a~gi~~~-~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
++.+..++++...| +-|..+.+++.. ..++|-.+|.+|+|.+...+|-|..|++.++.+++++++...+
T Consensus 476 iWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 476 IWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999997776 669999999865 6789999999999999999999999999998888777666554
No 229
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.32 E-value=4e-06 Score=95.99 Aligned_cols=144 Identities=15% Similarity=0.127 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCC--CCccchhHHHHH-HHHHH
Q psy10046 660 FLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQ--PWLNVKKTYAAC-LIGCG 736 (805)
Q Consensus 660 ~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr--~~~gr~~~~~~~-~~~~~ 736 (805)
++.++...+...+++.....+++.|++..|.+...++++.....+.+++..++.|+++|| .++|||+.+.+. .+...
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~ 85 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA 85 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHH
Confidence 334444444455556666778888998999999999999999999999999999999995 238888887764 55555
Q ss_pred HHHhhhhhhhhhH-----------------HHHHHHHHHHhhhhhhhchhhhhhhhhccCccch--hhhhHHHHHHHhhh
Q psy10046 737 VSTALMPLFATNY-----------------WALLFTCLSFGIFFASNFSCTPIILVELVPLDRF--ATAYGLTLLAQGIG 797 (805)
Q Consensus 737 i~~l~~~~~~~~~-----------------~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~--~~a~gl~~~~~~ig 797 (805)
+++++++. ..+. +..++...+..++.....+...++++|.+|++++ +.++++.+.+.++|
T Consensus 86 ~~l~ll~~-~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG 164 (477)
T TIGR01301 86 FAVILIGF-AADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIG 164 (477)
T ss_pred HHHHHHHh-CchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHH
Confidence 55555542 2221 2223333444567777777888999999997754 67899999999999
Q ss_pred hccCCCC
Q psy10046 798 NLVGPPL 804 (805)
Q Consensus 798 ~~igp~i 804 (805)
+++|+.+
T Consensus 165 ~ilg~~~ 171 (477)
T TIGR01301 165 NVLGYAA 171 (477)
T ss_pred HHHHHHH
Confidence 9888654
No 230
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.30 E-value=3.8e-07 Score=85.23 Aligned_cols=102 Identities=21% Similarity=0.267 Sum_probs=88.3
Q ss_pred HHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccC
Q psy10046 700 SYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVP 779 (805)
Q Consensus 700 ~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~ 779 (805)
+...++.+++.++.|++.|| ++||+.+..+.++..++.+.+. ...+.+.+.+..++.|++.+...+....++.|.+|
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~--~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDR--FGRKPVLLVGLFIFVLSTAMFA-LSSNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EeehhHHHHHHhhHHHHHhh--cchhHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 45567888899999999999 9999999888888877776665 35667777788889999999889999999999999
Q ss_pred ccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 780 LDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 780 ~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+++++.++|+.++...+|..++|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~ 106 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPL 106 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHh
Confidence 9999999999999999999998875
No 231
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.26 E-value=2.2e-05 Score=93.42 Aligned_cols=153 Identities=17% Similarity=0.053 Sum_probs=121.8
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHh-hhCChHHHHHHHHHHHHHHHHHHhcCc--------HHH
Q psy10046 183 GLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVE-KFGCRSMTIVAGIISGVGFVLSCFSRT--------IEH 253 (805)
Q Consensus 183 ~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsD-r~Grr~vlii~~~l~~i~~i~~a~a~~--------~~~ 253 (805)
..+..++...+|.+...+..+...+.....+.++++|.++| ++|+++.+.++.++..++.++.++... ...
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 34445667789999999999999999999999999999999 589999999999999999888776421 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcc-c---chhHHHHHHHHHhhHHHhhHHHHHHHHhhc-------cchHHHHHH
Q psy10046 254 MYLTFGLLAGIGLALSYVTAVVSIAFWFE-K---KRGLACSLGSTGTGFGTTVYAPITSYLISE-------YGWRGTVLL 322 (805)
Q Consensus 254 l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~---~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~-------~gWr~~f~i 322 (805)
++++ -++.++|.|++-+...+...+.++ + +|-..+.++..+.++|..+++++.+++.+. .+|.+.|.+
T Consensus 88 ~l~g-LaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i 166 (654)
T TIGR00926 88 DLLG-LALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGV 166 (654)
T ss_pred HHHH-HHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Confidence 3343 356778888889999999997664 2 377788888999999999999999988744 369999999
Q ss_pred HHHHHHHHHHHHHh
Q psy10046 323 LSGTFFNLCVCGAI 336 (805)
Q Consensus 323 ~~~~~~~~~i~~~~ 336 (805)
.+++.++.+++.+.
T Consensus 167 ~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 167 PAILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877776666544
No 232
>PTZ00207 hypothetical protein; Provisional
Probab=98.25 E-value=3.2e-06 Score=98.87 Aligned_cols=123 Identities=9% Similarity=0.036 Sum_probs=99.1
Q ss_pred hhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhh-----hhH
Q psy10046 675 VIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFA-----TNY 749 (805)
Q Consensus 675 ~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~-----~~~ 749 (805)
+.+..+.+.+.+++|++..+.+++.... ....++.++.|++.|| +|+|+++.++.++.+++.+++++.. .+.
T Consensus 44 y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr--~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~ 120 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDY--LGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSV 120 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHHhcccccCcH
Confidence 4455677777777999999988877653 3334566678999999 9999999999999999888877431 467
Q ss_pred HHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccC
Q psy10046 750 WALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVG 801 (805)
Q Consensus 750 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~ig 801 (805)
+.+.++.++.|++.+..++.....+.+.+| ++||.+.|+..++.++|+++.
T Consensus 121 ~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~ 171 (591)
T PTZ00207 121 VRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAIL 171 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHH
Confidence 778888888899888877777778888886 788999999999999999754
No 233
>PRK11462 putative transporter; Provisional
Probab=98.25 E-value=0.0001 Score=84.94 Aligned_cols=120 Identities=11% Similarity=0.063 Sum_probs=79.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHHHHHH
Q psy10046 196 SKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRT--IEHMYLTFGLLAGIGLALSYVTA 273 (805)
Q Consensus 196 s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~--~~~l~i~~R~l~G~g~g~~~~~~ 273 (805)
+....+++.+++.++..++.+++++++||+|+|+++..+.++.++..++..+.++ ...+++ .-++.|++.+...+..
T Consensus 261 ~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~~~~~~l~ 339 (460)
T PRK11462 261 TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFV-FIFVIGVLHQLVTPIQ 339 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 3445567778888999999999999999999999877655544443333333322 223323 3356777776666655
Q ss_pred HHHHhhhcc-------cc-hhHHHHHHHHHhhHHHhhHHHHHHHHhhccch
Q psy10046 274 VVSIAFWFE-------KK-RGLACSLGSTGTGFGTTVYAPITSYLISEYGW 316 (805)
Q Consensus 274 ~~~l~~~~p-------~~-rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gW 316 (805)
.+++++..+ ++ .|..++.+..+.-+|..+++.++|++....|+
T Consensus 340 ~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 340 WVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 556554432 22 35556777788888999999999888765444
No 234
>KOG2615|consensus
Probab=98.21 E-value=1.8e-06 Score=92.75 Aligned_cols=113 Identities=26% Similarity=0.319 Sum_probs=96.2
Q ss_pred CCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhch
Q psy10046 689 GLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFS 768 (805)
Q Consensus 689 G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~ 768 (805)
+.+...+|++-+.++++..+.++.+|.++|+ +|||.++.++.+..++..+++. ...++..++..=++.|++-| ..+
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~--yGRkpvll~c~~~va~s~ll~~-~S~~F~afv~aR~l~Gi~kg-nl~ 139 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDR--YGRKPVLLACLIGVALSYLLWA-LSRNFAAFVLARFLGGIFKG-NLS 139 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhh--hCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhccC-chH
Confidence 3355778899999999999999999999999 9999999999999998777666 66777444444566676544 567
Q ss_pred hhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCCC
Q psy10046 769 CTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPLA 805 (805)
Q Consensus 769 ~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ia 805 (805)
+..++++|++++++|+.+++.+++..++|-++||+||
T Consensus 140 v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIG 176 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIG 176 (451)
T ss_pred HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhh
Confidence 7888999999999999999999999999999999986
No 235
>KOG0637|consensus
Probab=98.21 E-value=2.5e-05 Score=86.21 Aligned_cols=124 Identities=17% Similarity=0.172 Sum_probs=88.6
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHh----hhCChHHHHHH-HHHHHHHHHHHHhcCcHHHH-----
Q psy10046 185 LYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVE----KFGCRSMTIVA-GIISGVGFVLSCFSRTIEHM----- 254 (805)
Q Consensus 185 ~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsD----r~Grr~vlii~-~~l~~i~~i~~a~a~~~~~l----- 254 (805)
+++++...+|+.....+.+.-+.-+...+.+|+.|..+| |||||+.++.. .++..++.++..++.++..+
T Consensus 54 y~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~ 133 (498)
T KOG0637|consen 54 YLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNE 133 (498)
T ss_pred cccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCc
Confidence 346778899999888888888888888888999999999 59988765554 55556666666666443321
Q ss_pred -------HHHHHHHHH-----HHHHHHHHHHHHHHhhhcc-cchhH-HHHHHHHHhhHHHhhHHHHHHH
Q psy10046 255 -------YLTFGLLAG-----IGLALSYVTAVVSIAFWFE-KKRGL-ACSLGSTGTGFGTTVYAPITSY 309 (805)
Q Consensus 255 -------~i~~R~l~G-----~g~g~~~~~~~~~l~~~~p-~~rg~-a~gi~~~~~~lG~~lgp~i~~~ 309 (805)
-++ -++.| ++.-.+....-+++.+... .++.+ +++++..+.++|.++|-.++++
T Consensus 134 ~~~~~~rai~-~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 134 RKPVKPRAIV-LFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred ccccchHHHH-HHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc
Confidence 111 12333 4555677788888887773 33333 9999999999999998877763
No 236
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.18 E-value=8.7e-07 Score=105.76 Aligned_cols=130 Identities=15% Similarity=0.060 Sum_probs=109.3
Q ss_pred hhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhh------
Q psy10046 673 WFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFA------ 746 (805)
Q Consensus 673 ~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~------ 746 (805)
.......-++.+-++++++..+.+++.+.+.++.+++.++.+++.|| .+|++++.++.++.+++.+++.+..
T Consensus 48 ~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r--~~r~~~i~~g~ll~~lg~ll~alphf~~~~y 125 (633)
T TIGR00805 48 YNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK--LHRPIVIGIGCAIMGLGSFLLSLPHFLSGRY 125 (633)
T ss_pred HHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc--cCcceEEEecHHHHHHHHHHHhChHHhcCCc
Confidence 33444555666667789999999999999999999999999999999 9999999999999888877765321
Q ss_pred -------------------------------------------h-hHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccc
Q psy10046 747 -------------------------------------------T-NYWALLFTCLSFGIFFASNFSCTPIILVELVPLDR 782 (805)
Q Consensus 747 -------------------------------------------~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~ 782 (805)
. .+..+++.-++.|+|.+..+++...++.|.+|+++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~ 205 (633)
T TIGR00805 126 SYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKN 205 (633)
T ss_pred cccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccc
Confidence 0 13445678889999999999999999999999999
Q ss_pred hhhhhHHHHHHHhhhhccCCCC
Q psy10046 783 FATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 783 ~~~a~gl~~~~~~ig~~igp~i 804 (805)
++...|+.++...+|.++|+.+
T Consensus 206 ~~~~~~i~~~~~~iG~~lG~ll 227 (633)
T TIGR00805 206 SPLYIGILESIAVFGPAFGYLL 227 (633)
T ss_pred cHHHHHHHHHHHHhhhHHHHHH
Confidence 9999999999999998888765
No 237
>KOG2532|consensus
Probab=98.17 E-value=2e-05 Score=90.12 Aligned_cols=156 Identities=12% Similarity=0.139 Sum_probs=111.5
Q ss_pred HHHHHHHHHH-HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC---------hHHHHHHHHHHHHHHHHHHhcCc
Q psy10046 181 SFGLLYIEFL-NEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGC---------RSMTIVAGIISGVGFVLSCFSRT 250 (805)
Q Consensus 181 ~~~~~~p~i~-~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Gr---------r~vlii~~~l~~i~~i~~a~a~~ 250 (805)
.+-.++|.+. +-+|.+..+.|++.++..+.+.+..+++|.++|+.-+ |..-.++....+++.++.++.+.
T Consensus 276 ~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~ 355 (466)
T KOG2532|consen 276 LLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSD 355 (466)
T ss_pred HHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCC
Confidence 3344445544 5689999999999999999999999999999998644 34445556666666666666653
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHh-hhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhc---cchHHHHHHHHH
Q psy10046 251 IEH-MYLTFGLLAGIGLALSYVTAVVSIA-FWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISE---YGWRGTVLLLSG 325 (805)
Q Consensus 251 ~~~-l~i~~R~l~G~g~g~~~~~~~~~l~-~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~---~gWr~~f~i~~~ 325 (805)
-.. +.+.+ +..+++..+....+..... +..|++-+..+|+.+....+..+++|.+.+.+... ..|++.|++.++
T Consensus 356 ~~~~~a~~~-l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~ 434 (466)
T KOG2532|consen 356 EHRLLAVIL-LTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAG 434 (466)
T ss_pred CcchHHHHH-HHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHH
Confidence 222 11211 2333444444444444444 33889999999999999999999999999999942 479999999998
Q ss_pred HHHHHHHHHHhc
Q psy10046 326 TFFNLCVCGAIM 337 (805)
Q Consensus 326 ~~~~~~i~~~~~ 337 (805)
+.++..++..++
T Consensus 435 i~~~~~i~f~~f 446 (466)
T KOG2532|consen 435 ILIVGNIIFLFF 446 (466)
T ss_pred HHHHhchheeEe
Confidence 888777665555
No 238
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.16 E-value=7.3e-05 Score=84.40 Aligned_cols=122 Identities=16% Similarity=0.222 Sum_probs=99.3
Q ss_pred hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHHH
Q psy10046 193 FGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSR--TIEHMYLTFGLLAGIGLALSY 270 (805)
Q Consensus 193 ~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~--~~~~l~i~~R~l~G~g~g~~~ 270 (805)
+|.+.....+.......+..++.+++.++.+|+|+|+++.++.++++++.++..+.+ +.+.+++ +.++.++|.+...
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~-~~~i~~~g~~~~~ 345 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVV-ALIIAGVGTGIAN 345 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHH-HHHHHHHHhhccc
Confidence 566677777888888888888899999999999999999999999999999888765 5555544 5789999999888
Q ss_pred HHHHHHHhhhcc--------cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc
Q psy10046 271 VTAVVSIAFWFE--------KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG 315 (805)
Q Consensus 271 ~~~~~~l~~~~p--------~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g 315 (805)
+...+++++... +.-|...++...+.=+|.+++..+.|++....|
T Consensus 346 ~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 346 PLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred cccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 888888775432 224778888888888899999988888876544
No 239
>KOG4332|consensus
Probab=98.11 E-value=3.6e-05 Score=78.79 Aligned_cols=96 Identities=13% Similarity=0.125 Sum_probs=70.3
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Q psy10046 184 LLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAG 263 (805)
Q Consensus 184 ~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G 263 (805)
+++-++.+.+|....+++.+....+...++...+.|.|+|+-|||+.-+.-++.+.+.+ +.-.++.+-.+++ .|++.|
T Consensus 58 PYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmV-GR~LGG 135 (454)
T KOG4332|consen 58 PYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMV-GRVLGG 135 (454)
T ss_pred ceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEee-hhhhhh
Confidence 33335567788888888887777777788888999999999999996544444443333 2345677888877 599999
Q ss_pred HHHHHHHHHHHHHHh-hhc
Q psy10046 264 IGLALSYVTAVVSIA-FWF 281 (805)
Q Consensus 264 ~g~g~~~~~~~~~l~-~~~ 281 (805)
+..+..+.+--++.. +..
T Consensus 136 iaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 136 IATSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 999988887777655 554
No 240
>KOG0253|consensus
Probab=98.10 E-value=3.7e-05 Score=82.38 Aligned_cols=127 Identities=13% Similarity=0.088 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchh
Q psy10046 208 MAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRG 286 (805)
Q Consensus 208 ~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg 286 (805)
.+.-.-|.++.+.+.||+|||+.+..++++++++.++...+.+-..+.+ +-|..-++.++.+.+.+.+..|.+| +-|+
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tv-llf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTV-LLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHH-HHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 4455678889999999999999999999999999988776654322211 2233334556667777888889999 6699
Q ss_pred HHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 287 LACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 287 ~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
.+.|......-+|+++.|+|+ +.....-..+..+.+..+++..++.+++
T Consensus 470 tgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcff 518 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFF 518 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheee
Confidence 999999999999999999999 3333334455556666666666665554
No 241
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.10 E-value=0.00018 Score=69.66 Aligned_cols=115 Identities=12% Similarity=0.058 Sum_probs=92.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10046 195 ASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAV 274 (805)
Q Consensus 195 ~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~ 274 (805)
++...-....++....+.+..++.+.+.+++|.|+.++++.+++.+..+.. +-++.+.++++ .++.|++.+..++...
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~-s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPA-SALLGFGAALLWTAQG 111 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHH-HHHHhhhhHHhhHhhh
Confidence 333344456677777788888999999999999999999999998766554 44566666564 7899999999999999
Q ss_pred HHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHh
Q psy10046 275 VSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLI 311 (805)
Q Consensus 275 ~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~ 311 (805)
.++.+... +++++..+++......+.++|.++..++.
T Consensus 112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998776 66999999999988888888887776554
No 242
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.05 E-value=0.00027 Score=82.61 Aligned_cols=172 Identities=15% Similarity=0.138 Sum_probs=119.4
Q ss_pred HHHHHhHHHHHHHHHHHHHHHH-HhCCCh---hHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-hHHHHHHHHHHHHHHHH
Q psy10046 170 FINMAGDGIAFSFGLLYIEFLN-EFGASK---SKTAWIGSLFMAVPLLLGPVASAFVEKFGC-RSMTIVAGIISGVGFVL 244 (805)
Q Consensus 170 ~~~~~~~~~~~~~~~~~p~i~~-~~g~s~---~~~~l~~s~~~lg~~ig~l~~G~LsDr~Gr-r~vlii~~~l~~i~~i~ 244 (805)
++.++.....+....+.|.... -|+-+. ...++....+.++..++..+.|.+.-+++| |+.++++.++..+++.+
T Consensus 317 vi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Ga 396 (599)
T PF06609_consen 317 VISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGA 396 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHH
Confidence 3333333333455555565544 344443 356788888999999999999999998886 44556777666665444
Q ss_pred HHhc--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhh---------
Q psy10046 245 SCFS--RTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLIS--------- 312 (805)
Q Consensus 245 ~a~a--~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~--------- 312 (805)
++.. +|.... +++-++.|+|.|..............| ++.|.+.|+......+|+.+|..+...+..
T Consensus 397 ma~~~~~n~~~~-i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~ 475 (599)
T PF06609_consen 397 MAAVRPDNKNAA-IAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPK 475 (599)
T ss_pred HHHccCCCcchH-HHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHH
Confidence 4433 444444 346789999999877777666665556 679999999999999988888777644331
Q ss_pred -----------------------------------------------------ccchHHHHHHHHHHHHHHHHHHHhccC
Q psy10046 313 -----------------------------------------------------EYGWRGTVLLLSGTFFNLCVCGAIMRD 339 (805)
Q Consensus 313 -----------------------------------------------------~~gWr~~f~i~~~~~~~~~i~~~~~~~ 339 (805)
..++|++|+....++++.+++.+++.+
T Consensus 476 ~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d 555 (599)
T PF06609_consen 476 YVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGD 555 (599)
T ss_pred HHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 014689999888888888888888876
Q ss_pred Cch
Q psy10046 340 PEW 342 (805)
Q Consensus 340 p~~ 342 (805)
.+.
T Consensus 556 ~~~ 558 (599)
T PF06609_consen 556 IDK 558 (599)
T ss_pred hHH
Confidence 643
No 243
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.97 E-value=6.4e-05 Score=86.79 Aligned_cols=124 Identities=13% Similarity=0.049 Sum_probs=105.4
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc----------CcHHHHHHHHHH
Q psy10046 191 NEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS----------RTIEHMYLTFGL 260 (805)
Q Consensus 191 ~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a----------~~~~~l~i~~R~ 260 (805)
..+|.++...|++.....++..++..+.+++.+|++.|+++.++.++.+++.+...+. ++.+.+ ++.-+
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~-~~~~~ 359 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV-LGDSI 359 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeee-eehhH
Confidence 4689999999999999999999999999999999999999999999998887554311 232222 33467
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc
Q psy10046 261 LAGIGLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG 315 (805)
Q Consensus 261 l~G~g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g 315 (805)
+.+++.+..+.+...++.+..| +.+|...+++....++|..+++.+++++.++.|
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8899989888888888888887 669999999999999999999999999998776
No 244
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.96 E-value=5.3e-05 Score=64.91 Aligned_cols=76 Identities=14% Similarity=0.106 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHH
Q psy10046 179 AFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHM 254 (805)
Q Consensus 179 ~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l 254 (805)
.+.+.+++|.++++.++|..+.+++.+...+||.+|.+...++.++..+++.+.+++++.++..+.+++..+.+.+
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 3678889999999999999999999999999999999999999999888999999999999999999999887765
No 245
>KOG3574|consensus
Probab=97.96 E-value=0.0012 Score=71.43 Aligned_cols=145 Identities=13% Similarity=0.004 Sum_probs=78.1
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecC-C-CC--ccchhHHHH
Q psy10046 655 FLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACD-Q-PW--LNVKKTYAA 730 (805)
Q Consensus 655 l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~d-r-~~--~gr~~~~~~ 730 (805)
++-+.+..+++.....=.++..-....+.-+.++|++..+-+++..+.--.+++.....|.++. . +. +-|...+-+
T Consensus 262 Lklk~v~~la~i~lt~K~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~ 341 (510)
T KOG3574|consen 262 LKLKSVRWLAGILLTGKLGFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRL 341 (510)
T ss_pred HcCccHHHHHHHHHHHHHHhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHH
Confidence 3333343444444444455555555556667789999888776554444444544444443333 2 10 112222333
Q ss_pred HHHHHHHHHhhh-hhhhh-------hHHHHHH-HHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhc
Q psy10046 731 CLIGCGVSTALM-PLFAT-------NYWALLF-TCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNL 799 (805)
Q Consensus 731 ~~~~~~i~~l~~-~~~~~-------~~~~~~~-~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~ 799 (805)
....+..++..+ +...+ .+..+.+ ...+.+++.-..|....+..+.+.++..-|+-+.+.+....+|+-
T Consensus 342 ~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~ 419 (510)
T KOG3574|consen 342 GGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGN 419 (510)
T ss_pred HHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCC
Confidence 333333333322 21111 1222222 223334444555556677888899999999999999999999874
No 246
>KOG0252|consensus
Probab=97.86 E-value=1.2e-05 Score=88.64 Aligned_cols=174 Identities=14% Similarity=0.088 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHH--------HHH-HHHHHHHHHHHHHHHHHhhhCChHHHHH
Q psy10046 163 MVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAW--------IGS-LFMAVPLLLGPVASAFVEKFGCRSMTIV 233 (805)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l--------~~s-~~~lg~~ig~l~~G~LsDr~Grr~vlii 233 (805)
..++..+...|+.+...+..+.+...+.+.+|+.+..... ... +...++..|..+...++|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5667777777777777788888888888888775443322 122 2223334466677788999999999999
Q ss_pred HHHHHHHHHHHHHhcCc----HHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHH
Q psy10046 234 AGIISGVGFVLSCFSRT----IEHMYLTFGLLAGI-GLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPIT 307 (805)
Q Consensus 234 ~~~l~~i~~i~~a~a~~----~~~l~i~~R~l~G~-g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~ 307 (805)
+++++++..+..+...| ...+++.+ .+..+ +.-+.-.....+-++.|| +-|+.+-|+..+..-+|.++|....
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y-~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F 462 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLY-SLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGF 462 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehH-HHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHh
Confidence 99999999999888766 22222212 22222 222233444455569999 5699999999999999999999999
Q ss_pred HHHhh-----ccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 308 SYLIS-----EYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 308 ~~l~~-----~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
.++.+ ..|.+++|++.++..++..+..+++
T Consensus 463 ~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 463 LYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred hHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 99998 7899999999988887777666655
No 247
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.80 E-value=0.019 Score=65.86 Aligned_cols=125 Identities=8% Similarity=-0.047 Sum_probs=89.8
Q ss_pred HHHHHHhCC-----ChhHHHHHHHHHHHHHHHH-HHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc----Cc------
Q psy10046 187 IEFLNEFGA-----SKSKTAWIGSLFMAVPLLL-GPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS----RT------ 250 (805)
Q Consensus 187 p~i~~~~g~-----s~~~~~l~~s~~~lg~~ig-~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a----~~------ 250 (805)
-.+.+.+.+ ....+.++-+...+.+++. .++.+++++|++|++++.+....+.+..++.++. .+
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~ 106 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTA 106 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcH
Confidence 456666655 3467889988888877777 8999999999999999888877777776665554 11
Q ss_pred ---------------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHH
Q psy10046 251 ---------------------IEHMYLTFGLLAGIGLALSYV-TAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPIT 307 (805)
Q Consensus 251 ---------------------~~~l~i~~R~l~G~g~g~~~~-~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~ 307 (805)
.|...+ +=+...+....... .-..++.+.+. ++-.+..+++..+.++|..+++.+.
T Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~W~~~~-FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~ 185 (472)
T TIGR00769 107 LADKLLSLLPPGFMGFIAILRIWSFAL-FYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI 185 (472)
T ss_pred HHHHHHhhcchhhHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 22344444454444 55666777775 7788899999999999999999998
Q ss_pred HHHhh
Q psy10046 308 SYLIS 312 (805)
Q Consensus 308 ~~l~~ 312 (805)
.++..
T Consensus 186 ~~~~~ 190 (472)
T TIGR00769 186 KYFSK 190 (472)
T ss_pred HHHHH
Confidence 88773
No 248
>KOG0255|consensus
Probab=97.79 E-value=2.9e-05 Score=90.89 Aligned_cols=112 Identities=21% Similarity=0.162 Sum_probs=97.6
Q ss_pred cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhc
Q psy10046 688 QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNF 767 (805)
Q Consensus 688 ~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~ 767 (805)
...+.....+..+++.++.++|.+++|.++|+ +|||.++.+++++..++.++.. +..+++.++++-++.|++.++.+
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~--~GRk~~~~~~~~~~~i~~~~~a-~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR--FGRKPVLLVSLLLFIIFGILTA-FAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhh--cccHHHHHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhhccchh
Confidence 34566667778888899999999999999999 9999999999999999987766 68899999999999999999999
Q ss_pred hhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 768 SCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
.+..++++|.+++++|+.+..+ ..+...++.++|+
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~ 224 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPA 224 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHH
Confidence 9999999999999999999999 6555555555543
No 249
>PRK03612 spermidine synthase; Provisional
Probab=97.71 E-value=0.0045 Score=72.20 Aligned_cols=169 Identities=11% Similarity=0.038 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHH-HHHHHHHH
Q psy10046 163 MVVLAAFFINMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIV-AGIISGVG 241 (805)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii-~~~l~~i~ 241 (805)
.+.++.++..++...+-..+.- .+.--+|.+....+.+.++|++|.++|..+++++.++.-++...+- ...+++..
T Consensus 18 ~l~~~~f~sg~~~L~yEv~~~r---~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~ 94 (521)
T PRK03612 18 LLLAAVFVCAACGLVYELLLGT---LASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGL 94 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3444444444444333333332 2334568888899999999999999999999988743322222111 11111111
Q ss_pred H-----HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhh-ccc
Q psy10046 242 F-----VLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLIS-EYG 315 (805)
Q Consensus 242 ~-----i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~-~~g 315 (805)
+ ...++...+..++..+-++.|+..|+..|....+......++-|...|-......+|.++|.++.++++- .+|
T Consensus 95 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG 174 (521)
T PRK03612 95 SALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLG 174 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcc
Confidence 1 1111111122222223456677777777776666554433345677888888999999999999887654 678
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy10046 316 WRGTVLLLSGTFFNLCVCG 334 (805)
Q Consensus 316 Wr~~f~i~~~~~~~~~i~~ 334 (805)
-..+.++.+.+.+++.++.
T Consensus 175 ~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 175 LIRTAALTGSLNLLAALVF 193 (521)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 7666666666555544433
No 250
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.70 E-value=5.6e-06 Score=94.78 Aligned_cols=108 Identities=20% Similarity=0.331 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhh---hHHHHHHHHHHHhhhhhhhchhh
Q psy10046 694 EATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFAT---NYWALLFTCLSFGIFFASNFSCT 770 (805)
Q Consensus 694 ~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~---~~~~~~~~~~l~G~~~g~~~~~~ 770 (805)
..++..+...++.++|.+++|+++|| +|||+.+.++.++..++.++.. ..+ +++.+.+.-++.|++.|...++.
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~--~GRk~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADR--YGRKPALIISALLMIIGSILIA-FAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccc--cccccccccccccccccccccc-ccccccccccccccccccccccccccccc
Confidence 45678889999999999999999999 9999999999999888888776 455 78888888899999999999999
Q ss_pred hhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 771 PIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 771 ~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
+.++.|..|+++|+...++......+|.+++..+
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~ 157 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLI 157 (451)
T ss_pred cccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999998888877654
No 251
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.69 E-value=0.0042 Score=70.82 Aligned_cols=108 Identities=12% Similarity=-0.079 Sum_probs=70.1
Q ss_pred hHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhh-----------hhhhHHHHHHHHHHHhhh
Q psy10046 694 EATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPL-----------FATNYWALLFTCLSFGIF 762 (805)
Q Consensus 694 ~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~-----------~~~~~~~~~~~~~l~G~~ 762 (805)
....++..++++..+||.+..|..-. ..+.++++. ..++=.+..-++.+ ...+.+..++.++++|+.
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~~p-~~~~~~l~i-~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~glt 385 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFMWP-DEDSRWLPI-LSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEee-CCCccchHH-HHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHh
Confidence 44567888999999999977664322 011123222 22221122111110 113456667778999999
Q ss_pred hhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 763 FASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 763 ~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
-|-..++...+.++.++++++-.+-.+...+-.+|-++|..
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~ 426 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAV 426 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888888898898888888888888888887777654
No 252
>KOG2533|consensus
Probab=97.68 E-value=0.0004 Score=79.95 Aligned_cols=159 Identities=15% Similarity=0.130 Sum_probs=99.6
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh----hCChHHHHHHHHHHHHHH-
Q psy10046 169 FFINMAGDGIAFSFGLLYIEFLNE-FGASKSKTAWIGSLFMAVPLLLGPVASAFVEK----FGCRSMTIVAGIISGVGF- 242 (805)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~p~i~~~-~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr----~Grr~vlii~~~l~~i~~- 242 (805)
+++.++.....+++...+|.+.++ .|.+..+++.+.+.+.++.+++.+++|+++|| +.+|..+...+.++.+..
T Consensus 279 ~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~ 358 (495)
T KOG2533|consen 279 SLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGA 358 (495)
T ss_pred HHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 344444555556677777888887 56899999999999999999999999999999 677777777776666554
Q ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-c-cchhHHHHHHHHHhhHHHhhHHHH-HHHHhhccchHHH
Q psy10046 243 VLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWF-E-KKRGLACSLGSTGTGFGTTVYAPI-TSYLISEYGWRGT 319 (805)
Q Consensus 243 i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~-p-~~rg~a~gi~~~~~~lG~~lgp~i-~~~l~~~~gWr~~ 319 (805)
+......+......+ -+..+.+.....+......+... + .++-...++...+.+.+.+++|.+ .+.....++|.+.
T Consensus 359 ~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~ 437 (495)
T KOG2533|consen 359 ISLLAAAVLPGAYGA-FLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAV 437 (495)
T ss_pred HHHHhhccchHHhHH-HHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhH
Confidence 444344333333221 23333444444555555555443 3 334444455555555554444443 3444556789999
Q ss_pred HHHHHHHHH
Q psy10046 320 VLLLSGTFF 328 (805)
Q Consensus 320 f~i~~~~~~ 328 (805)
|++....++
T Consensus 438 f~~~~~~~~ 446 (495)
T KOG2533|consen 438 FYMLVAACV 446 (495)
T ss_pred HHHHHHHHH
Confidence 965554333
No 253
>KOG0254|consensus
Probab=97.66 E-value=7e-05 Score=87.55 Aligned_cols=105 Identities=20% Similarity=0.276 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhh
Q psy10046 694 EATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPII 773 (805)
Q Consensus 694 ~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~ 773 (805)
+.+++.+...+++.+|.++.|+++|+ +|||+++.++.+...++.++.. .+.+...+.+.-++.|+|.|....+.+.+
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~--~GRk~~l~~~~~~~~iG~ii~~-~a~~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDR--IGRKKTLLLAVVLFLIGAIIIA-LAPSWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHhccchhhhhhcchhh
Confidence 34789999999999999999999999 9999999999999999888877 56789999999999999999999999999
Q ss_pred hhhccCccchhhhhHHHHHHHhhhhccC
Q psy10046 774 LVELVPLDRFATAYGLTLLAQGIGNLVG 801 (805)
Q Consensus 774 ~~~~~~~~~~~~a~gl~~~~~~ig~~ig 801 (805)
++|+.|++.||...++......+|.++|
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~ 194 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGILLG 194 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998888877665
No 254
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.64 E-value=4.3e-05 Score=85.68 Aligned_cols=150 Identities=17% Similarity=0.169 Sum_probs=115.3
Q ss_pred chhhHH-HHHHHHHHHHHHHhhhhhhhhHHHHHHh-cC----CChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhH
Q psy10046 654 MFLELH-FLLVSISTILLFTWFVIPYFYLTDFVTN-QG----LSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKT 727 (805)
Q Consensus 654 ~l~~~~-~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G----~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~ 727 (805)
.++.|+ ++.++..=+.=-++++++...+..|+.. .+ +|+.++.-+++.++...-+..+++||++||. +|+|++
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~-LG~~~t 94 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRV-LGTRRT 94 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHh-cchhHH
Confidence 344433 3333333344456666666666666553 44 9999999999998888888899999999993 699999
Q ss_pred HHHHHHHHHHHHhhhhhhh-hhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCc--cchhhhhHHHHHHHhhhhccCCCC
Q psy10046 728 YAACLIGCGVSTALMPLFA-TNYWALLFTCLSFGIFFASNFSCTPIILVELVPL--DRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 728 ~~~~~~~~~i~~l~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~--~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
++.+.++..++.+++.... .+...+++.++++++|.|..=+....++.+.+|+ .+|-.+++++++..++|++++|.+
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i 174 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII 174 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH
Confidence 9999999999988887443 4677788888888899999999999999999983 346778888888888998888754
No 255
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.63 E-value=0.0046 Score=68.31 Aligned_cols=147 Identities=14% Similarity=0.061 Sum_probs=113.3
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHh-hhCChHHHHHHHHHHHHHHHH---HHhcCcHHHHHHHHHHHH
Q psy10046 187 IEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVE-KFGCRSMTIVAGIISGVGFVL---SCFSRTIEHMYLTFGLLA 262 (805)
Q Consensus 187 p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsD-r~Grr~vlii~~~l~~i~~i~---~a~a~~~~~l~i~~R~l~ 262 (805)
|+=-+-||++..+...+......|..+|-.+.|++.. +.+.++...+++.+..++..+ .++..+.+.+..+ -++.
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~-~~l~ 311 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPG-VFLL 311 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH-HHHH
Confidence 4445679999999999999999999999999999877 677888777777776666554 3445677777664 5899
Q ss_pred HHHHHHHHHHHHHHHhhhc-ccchhHHHHHHHHHhhHHHhhHHHHHHHHhhc----------cchHHHHHHHHHHHHHHH
Q psy10046 263 GIGLALSYVTAVVSIAFWF-EKKRGLACSLGSTGTGFGTTVYAPITSYLISE----------YGWRGTVLLLSGTFFNLC 331 (805)
Q Consensus 263 G~g~g~~~~~~~~~l~~~~-p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~----------~gWr~~f~i~~~~~~~~~ 331 (805)
|++.|.+.....+.+.+.. +.+-|..+|.|.....++..++-.++|.+.+. .++-.+|.+.++..++.+
T Consensus 312 G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~ 391 (403)
T PF03209_consen 312 GLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAAL 391 (403)
T ss_pred HHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHH
Confidence 9999988777777776666 47799999999999999999999999887652 246666766666555554
Q ss_pred HHH
Q psy10046 332 VCG 334 (805)
Q Consensus 332 i~~ 334 (805)
++.
T Consensus 392 ~ll 394 (403)
T PF03209_consen 392 VLL 394 (403)
T ss_pred HHH
Confidence 443
No 256
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.59 E-value=0.0006 Score=57.79 Aligned_cols=64 Identities=16% Similarity=0.219 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q psy10046 175 GDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIIS 238 (805)
Q Consensus 175 ~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~ 238 (805)
.++.....-++++.+.++.|++..++|.+.++..+...++++++|.++||+|+++.++....++
T Consensus 12 ~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 12 YFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3444445566677778889999999999999999999999999999999999988776665443
No 257
>KOG1479|consensus
Probab=97.50 E-value=0.029 Score=62.22 Aligned_cols=109 Identities=14% Similarity=0.016 Sum_probs=72.0
Q ss_pred hhhHHHHHHH-HHHHHHhhhheeeeecCCCCccchhHHHHHHH-HHHHHHhh------hhhhhhhHHHHHHHHHHHhhhh
Q psy10046 692 KEEATSILSY-IGVTNTVGMVALGWACDQPWLNVKKTYAACLI-GCGVSTAL------MPLFATNYWALLFTCLSFGIFF 763 (805)
Q Consensus 692 ~~~a~~~~~~-~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~-~~~i~~l~------~~~~~~~~~~~~~~~~l~G~~~ 763 (805)
...+-++... +++...+|.++..|+... ++|++.....+ ...+-++. .+....+.+..++...++|+..
T Consensus 281 ~~y~~~~~~l~fN~~d~vG~~~a~~~~~~---~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsn 357 (406)
T KOG1479|consen 281 DWYALLLVFLSFNVFDLIGSILAALLTWP---DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSN 357 (406)
T ss_pred hhhHHHHHHHHhHHHHHhhhhhhhcccCC---CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhcc
Confidence 4444455555 889999999888888777 33333222221 11111222 1112345567788889999998
Q ss_pred hhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 764 ASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 764 g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
|-...+...+.++.++++++-.+-.+..++-..|-.+|..
T Consensus 358 GYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~ 397 (406)
T KOG1479|consen 358 GYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSL 397 (406)
T ss_pred chHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhH
Confidence 8888888889999998888777777777777777776654
No 258
>KOG3810|consensus
Probab=97.46 E-value=0.0024 Score=68.33 Aligned_cols=122 Identities=8% Similarity=0.023 Sum_probs=79.4
Q ss_pred HhCCChhHHH-HHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Q psy10046 192 EFGASKSKTA-WIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSY 270 (805)
Q Consensus 192 ~~g~s~~~~~-l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~ 270 (805)
+.+++..+.. =+.-+..-.+.++-.+.=.+.|..-.|+++++-.+.+.+..++.-+.++.+.+=+ +-++.|...+.-
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQv-lE~FyG~~tAaE- 112 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQV-LEFFYGPATAAE- 112 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheee-ehhhcChHHHHH-
Confidence 3455555443 1222222334444555556889888999988887777777778888888887744 456666654432
Q ss_pred HHHHHHHh-hhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc
Q psy10046 271 VTAVVSIA-FWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYG 315 (805)
Q Consensus 271 ~~~~~~l~-~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g 315 (805)
.+..+++- .+.|+++.++.+...++...|-.+|..++..++....
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~ 158 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLET 158 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcc
Confidence 23333333 3345778888888888888888888888888776433
No 259
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.39 E-value=0.00066 Score=71.05 Aligned_cols=124 Identities=13% Similarity=0.049 Sum_probs=94.0
Q ss_pred hhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhh------
Q psy10046 673 WFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFA------ 746 (805)
Q Consensus 673 ~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~------ 746 (805)
..+.+..|-|.+-+..|+|..+...+.....++..+| ++.|.+.|+ ++++.++.++.+...++...++...
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~--~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~ 93 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDR--FGPWVVLLIGAVLGFVGYGLLWLAVSGRIPS 93 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHh--cchHHHHHHHHHHHHHHHHHHHHHHhCccCc
Confidence 4455667778777779999999999888888888765 888999999 9999999988888888877766432
Q ss_pred hhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhcc
Q psy10046 747 TNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLV 800 (805)
Q Consensus 747 ~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~i 800 (805)
.+.|.+.++.++.|.+.+...........+.+| ++||++.|+.-.+.++++.+
T Consensus 94 ~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai 146 (250)
T PF06813_consen 94 LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAI 146 (250)
T ss_pred cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHH
Confidence 245556656666666544444554555557786 58999999999999988875
No 260
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.26 E-value=0.00049 Score=58.29 Aligned_cols=70 Identities=13% Similarity=0.143 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHH
Q psy10046 663 VSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIG 734 (805)
Q Consensus 663 ~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~ 734 (805)
+-+..++.+.+.....-|+|.|+++.|+++.+.+.+.++..+..+++.+++|+++|| +++++........
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk--~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADK--FGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCccHHHHHHHHH
Confidence 344556667777778889999999999999999999999999999999999999999 8887776655443
No 261
>KOG1237|consensus
Probab=97.24 E-value=0.062 Score=63.23 Aligned_cols=153 Identities=14% Similarity=0.016 Sum_probs=114.3
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHHHHHHhcC------------
Q psy10046 183 GLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEK-FGCRSMTIVAGIISGVGFVLSCFSR------------ 249 (805)
Q Consensus 183 ~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr-~Grr~vlii~~~l~~i~~i~~a~a~------------ 249 (805)
..++.++..+++.+...+.-.++.+.-...+.+++++.++|- +||-+.+.++.++..++.++..+..
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 455678889999988888889999999999999999999995 6899999999888888755433221
Q ss_pred ----------cH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc----c---chhHHHHHHHHHhhHHHhhHHHHHHH
Q psy10046 250 ----------TI---EHMYLTFGLLAGIGLALSYVTAVVSIAFWFE----K---KRGLACSLGSTGTGFGTTVYAPITSY 309 (805)
Q Consensus 250 ----------~~---~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p----~---~rg~a~gi~~~~~~lG~~lgp~i~~~ 309 (805)
+- ..++.+ .-+..+|.|+.-+...++-++-++ + .+...+.++.....+|..++..+..+
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~-l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vy 216 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGA-LYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVY 216 (571)
T ss_pred CCCCCcccCcchHHHHHHHHH-HHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHh
Confidence 11 123333 334556778877887777776665 1 24477888888899999998888888
Q ss_pred HhhccchHHHHHHHHHHHHHHHHHHHh
Q psy10046 310 LISEYGWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 310 l~~~~gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
+-+..||.+.|.+..+..++.+++.+.
T Consensus 217 iq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 217 IQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred hhhcccceeeccHHHHHHHHHHHHHHc
Confidence 878899999999888766655554443
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.17 E-value=0.1 Score=59.03 Aligned_cols=43 Identities=9% Similarity=-0.038 Sum_probs=34.4
Q ss_pred HHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhc
Q psy10046 757 LSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNL 799 (805)
Q Consensus 757 ~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~ 799 (805)
++..+..-..|....++-+.+..|..-|+.+-+.|++.++|+-
T Consensus 413 ~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt 455 (544)
T PF13000_consen 413 VLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT 455 (544)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC
Confidence 3334555666777777888889999999999999999999974
No 263
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.98 E-value=0.0022 Score=62.17 Aligned_cols=134 Identities=13% Similarity=0.076 Sum_probs=95.1
Q ss_pred HHHHHHHhhhhhhhhHHHHHHhcC------CChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHH
Q psy10046 666 STILLFTWFVIPYFYLTDFVTNQG------LSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVST 739 (805)
Q Consensus 666 ~~~~~~~~~~~~~~~lp~~~~~~G------~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~ 739 (805)
.+++.+.++.......-..++..+ +++.....-.++.....++..++.+.+.++ +|.|+.++++.++..+..
T Consensus 4 ~f~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~--lg~K~sm~lg~~~y~~y~ 81 (156)
T PF05978_consen 4 GFMFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNK--LGPKWSMILGSLGYAIYI 81 (156)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHH--HhhHHHHHHHHHHHHHHH
Confidence 344455555444444444443322 223222234455556667777778888999 999999998888877655
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 740 ALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 740 l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
.... ..+.+.++...++.|++.+..+.....++.+...++.+++..|+...+...+.++|..
T Consensus 82 ~~~~--~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~ 143 (156)
T PF05978_consen 82 ASFF--YPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNL 143 (156)
T ss_pred HHHH--hhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 5543 3456778889999999999999999999999888999999999999988888777753
No 264
>KOG3762|consensus
Probab=96.86 E-value=0.00044 Score=77.95 Aligned_cols=149 Identities=15% Similarity=0.099 Sum_probs=114.5
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHH
Q psy10046 653 SMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACL 732 (805)
Q Consensus 653 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~ 732 (805)
.++.+++.+++++..+++..+.....+++=-++++.|-.+..-|.......++-++.-+..+++++| +|+-+++.+++
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k--iGHv~v~~lgL 443 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK--IGHVNVMYLGL 443 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHH--hcccceeeehh
Confidence 4455566666666666666666666666655667777666655655555566677777888899999 99999999998
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHH-HHHhhhhccCCCC
Q psy10046 733 IGCGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTL-LAQGIGNLVGPPL 804 (805)
Q Consensus 733 ~~~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~-~~~~ig~~igp~i 804 (805)
.+.++=++.+. ...++|..+..-++-|+..+..+.....+++.+.|++.++++-|+.. .+.++|--+|..|
T Consensus 444 a~~~~Rf~~~S-~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslI 515 (618)
T KOG3762|consen 444 ACNVGRFLYYS-YLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLI 515 (618)
T ss_pred hHHHHHHHHHH-HhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhh
Confidence 88888888877 57789989999999999999999999999999999999999999876 4455555555444
No 265
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.76 E-value=0.0082 Score=67.10 Aligned_cols=108 Identities=15% Similarity=0.134 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHHHHHhc---CcH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-c---chhHHHHHHHHH
Q psy10046 229 SMTIVAGIISGVGFVLSCFS---RTI------EHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-K---KRGLACSLGSTG 295 (805)
Q Consensus 229 ~vlii~~~l~~i~~i~~a~a---~~~------~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~---~rg~a~gi~~~~ 295 (805)
+.++++.+++.+|.++..++ ... +.++++ -++.++|.|+.-+....++++.++ + +|.....++..+
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~g-L~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIG-LALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHH-HHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHH-HHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 46777888888888773332 222 456665 478899999999999999997775 2 377888899999
Q ss_pred hhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 296 TGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 296 ~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
.++|..++..+.+++-+++||.+.|++.++..++.++..+.-
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999887777666655543
No 266
>KOG2325|consensus
Probab=96.67 E-value=0.005 Score=70.00 Aligned_cols=142 Identities=11% Similarity=0.157 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHh--cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccc-hhHHHHHHHHHH
Q psy10046 660 FLLVSISTILLFTWFVIPYFYLTDFVTN--QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNV-KKTYAACLIGCG 736 (805)
Q Consensus 660 ~~~~~i~~~~~~~~~~~~~~~lp~~~~~--~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr-~~~~~~~~~~~~ 736 (805)
.++..+..++....+.....-.=.|++. .+.+...-|+.++...++.++++++.|+...| .+. |+-++++.+++.
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k--~~~~k~Pli~s~ii~~ 113 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNK--TGSVKKPLIVSFLIAI 113 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccc--cCCcccCHHHHHHHHH
Confidence 4455555555555555444433456665 78888889999999999999999999999998 432 666777777777
Q ss_pred HHHhhhhh---hhh-hHHHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCC
Q psy10046 737 VSTALMPL---FAT-NYWALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 737 i~~l~~~~---~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~i 804 (805)
++.++... ..+ ..++++++-++.|+|.|. ....-.++++..-.+.|.++++..+..+.+|.++||.+
T Consensus 114 ~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~ 184 (488)
T KOG2325|consen 114 IGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTI 184 (488)
T ss_pred HHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHH
Confidence 77666521 223 556777778888887665 55666778877677888999999888888888888865
No 267
>KOG2816|consensus
Probab=96.59 E-value=0.02 Score=65.63 Aligned_cols=123 Identities=11% Similarity=0.134 Sum_probs=104.3
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHH-HHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Q psy10046 188 EFLNEFGASKSKTAWIGSLFMAVPLLLGPVAS-AFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGL 266 (805)
Q Consensus 188 ~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G-~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~ 266 (805)
++...|+++..+.+...+...+...++.++.. .+...+|-|+++.+|++.-.+..++.+++++.|+++.+ .++. ...
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~-~v~~-~~~ 344 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAA-GVVV-ALA 344 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHH-HHHH-Hhh
Confidence 44567899999999888888888888888776 67778998999999999999999999999999998774 4554 445
Q ss_pred HHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhh
Q psy10046 267 ALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLIS 312 (805)
Q Consensus 267 g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~ 312 (805)
+...+...+.++.+.. +++|+++++....-++.++++|.+-+.+..
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 6677888888887764 889999999999999999999999887754
No 268
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.57 E-value=0.015 Score=60.79 Aligned_cols=129 Identities=22% Similarity=0.152 Sum_probs=89.1
Q ss_pred HhhhhhhhhHHHHHHhcCCCh--hhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhh-h
Q psy10046 672 TWFVIPYFYLTDFVTNQGLSK--EEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFAT-N 748 (805)
Q Consensus 672 ~~~~~~~~~lp~~~~~~G~s~--~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~-~ 748 (805)
..........+.+....+.+. ...++......+...++.++.|++.|| .|||+.+..+.....+..+....... .
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (338)
T COG0477 16 LDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDR--YGRRKVLIIGLLLFLLGTLLLALAPNVG 93 (338)
T ss_pred HhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccc--ccchHHHHHHHHHHHHHHHHHHhCccch
Confidence 333444445666666666555 467788888888888888999999999 78887776666543333222221222 3
Q ss_pred HHHHHHHHHHHhhhhhhhchhhhhhhhhccCc-cchhhhhHHHHH-HHhhhhccCC
Q psy10046 749 YWALLFTCLSFGIFFASNFSCTPIILVELVPL-DRFATAYGLTLL-AQGIGNLVGP 802 (805)
Q Consensus 749 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~-~~~~~a~gl~~~-~~~ig~~igp 802 (805)
.+.+.+..++.|++.+...+....++.+.+|. ..++...++... ...+|.+++|
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGP 149 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556666667888888888999999999987 678888888777 4666666665
No 269
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.52 E-value=0.0039 Score=74.47 Aligned_cols=129 Identities=16% Similarity=0.071 Sum_probs=96.6
Q ss_pred hhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhh-----
Q psy10046 674 FVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFAT----- 747 (805)
Q Consensus 674 ~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~----- 747 (805)
++++...+..|+.+ .|++...+..++..+....-+..+++|++.|+ ++|+++++.++.++..++.+++.+...
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~-~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~ 81 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADG-WLGKFKTILYLSIVYVVGHALLSFGAIPSSGH 81 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHhccCccccc
Confidence 34445555566554 79999999888888888888899999999998 379999988888887777666543211
Q ss_pred --hHHHHHHHHHHHhhhhhhhchhhhhhhhhccCcc---chhhhhHHHHHHHhhhhccCCC
Q psy10046 748 --NYWALLFTCLSFGIFFASNFSCTPIILVELVPLD---RFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 748 --~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~---~~~~a~gl~~~~~~ig~~igp~ 803 (805)
.....++.+++..+|.|+.-++..+...+.+..+ .+-..+.++++..++|++++++
T Consensus 82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~ 142 (654)
T TIGR00926 82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTI 142 (654)
T ss_pred chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223455667777888999999999999988743 4667788888888888887754
No 270
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.15 E-value=0.027 Score=61.37 Aligned_cols=110 Identities=21% Similarity=0.219 Sum_probs=84.2
Q ss_pred hhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhHHHHHH
Q psy10046 675 VIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNYWALLF 754 (805)
Q Consensus 675 ~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~ 754 (805)
..++.| ...+.+|++..+.+.++....+.+++...+.|.+.|| +|||+..++..++.+++++... ..++..+++
T Consensus 53 QGpY~Y--~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~--~Grk~~cl~~cily~~scl~k~--~~~~~~L~~ 126 (354)
T PF05631_consen 53 QGPYLY--ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR--YGRKKACLLFCILYSLSCLTKH--SSNYPVLLL 126 (354)
T ss_pred hcchhH--HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHHHHh--ccccHHHHH
Confidence 334444 2336799999999999999889999999999999999 9999999888888888887543 567888888
Q ss_pred HHHHHhhhhhhhchhhhhhhh-hc----cCccchhhhhHHH
Q psy10046 755 TCLSFGIFFASNFSCTPIILV-EL----VPLDRFATAYGLT 790 (805)
Q Consensus 755 ~~~l~G~~~g~~~~~~~~~~~-~~----~~~~~~~~a~gl~ 790 (805)
.-++.|++....+...-.|+. |. +|.+..+..++..
T Consensus 127 GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~ 167 (354)
T PF05631_consen 127 GRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLA 167 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 889999999988888765554 32 4444445545433
No 271
>KOG2563|consensus
Probab=96.12 E-value=0.015 Score=64.74 Aligned_cols=169 Identities=15% Similarity=0.050 Sum_probs=103.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-ChHHHHHHHHHHHHHHHHHHhc-
Q psy10046 171 INMAGDGIAFSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFG-CRSMTIVAGIISGVGFVLSCFS- 248 (805)
Q Consensus 171 ~~~~~~~~~~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~G-rr~vlii~~~l~~i~~i~~a~a- 248 (805)
++.+..+..++...++......-|.+...+|++..+..++.++++.+.|.+.||.. -|...++......++.+.....
T Consensus 274 ~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t 353 (480)
T KOG2563|consen 274 CYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCT 353 (480)
T ss_pred HHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33334455555555554455556777788999999999999999999999999976 4556666665555553222211
Q ss_pred ---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc---hHH-HH
Q psy10046 249 ---RTIEHMYLTFGLLAGIGLALSYVTAVVSIA-FWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYG---WRG-TV 320 (805)
Q Consensus 249 ---~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~-~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g---Wr~-~f 320 (805)
...+.++.. -.+.|++..+.+|...-+.. ..+|..-+...|+..+...+-.++-.++.+.+.+..+ |.+ .-
T Consensus 354 ~~~~~~viv~~t-~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (480)
T KOG2563|consen 354 LFLGDSVIVFTT-CGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPAN 432 (480)
T ss_pred ccCCceEehhhh-HHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccch
Confidence 122233343 35667777777887777766 4468544555666665555555555666666666555 333 33
Q ss_pred HHHHHHHHHHHHHHHhccCC
Q psy10046 321 LLLSGTFFNLCVCGAIMRDP 340 (805)
Q Consensus 321 ~i~~~~~~~~~i~~~~~~~p 340 (805)
+..+...++.+++..++++.
T Consensus 433 i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 433 IFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred hHhHHHHHHHHHHHhhhhhh
Confidence 34444445555555555543
No 272
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.98 E-value=4.3 Score=46.99 Aligned_cols=117 Identities=14% Similarity=0.049 Sum_probs=73.2
Q ss_pred ChhHHHHHHHHHHH-HHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc---------Cc-------------HH
Q psy10046 196 SKSKTAWIGSLFMA-VPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS---------RT-------------IE 252 (805)
Q Consensus 196 s~~~~~l~~s~~~l-g~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a---------~~-------------~~ 252 (805)
.++.+..+=....+ +..+...+..++++++++.+++-+....+.+..++.++. ++ +.
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 44556666554555 344556788999999999998887777777666665542 11 11
Q ss_pred HHHHH--------HHHHHHHHHHHHHH-HHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhh
Q psy10046 253 HMYLT--------FGLLAGIGLALSYV-TAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLIS 312 (805)
Q Consensus 253 ~l~i~--------~R~l~G~g~g~~~~-~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~ 312 (805)
+++.. +=++.-+-++...+ .-..+..+.++ ++-.+..+++..+.++|.++++.+..++.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11000 11122222222222 22444456665 778889999999999999999998888877
No 273
>KOG3098|consensus
Probab=95.52 E-value=0.89 Score=51.86 Aligned_cols=100 Identities=23% Similarity=0.224 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHh---hhCChHHHHHHHHHHHHHHHHHHhc------------------CcHHHHHHHHHHHHHHH
Q psy10046 207 FMAVPLLLGPVASAFVE---KFGCRSMTIVAGIISGVGFVLSCFS------------------RTIEHMYLTFGLLAGIG 265 (805)
Q Consensus 207 ~~lg~~ig~l~~G~LsD---r~Grr~vlii~~~l~~i~~i~~a~a------------------~~~~~l~i~~R~l~G~g 265 (805)
..+|..++..+++.+++ ++||++.+.++.++..++.++.-+. +++...++ ..++.|++
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~i-i~~l~G~~ 366 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALI-IGFLLGFG 366 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHH-HHHHHhhH
Confidence 34555566666777765 5899999999988888887776543 13334434 57899999
Q ss_pred HHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHH
Q psy10046 266 LALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPIT 307 (805)
Q Consensus 266 ~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~ 307 (805)
-++.......+++...|++|..+.+++..-..++..++-...
T Consensus 367 D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 367 DACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999988899999999998877777766554433
No 274
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.14 E-value=0.062 Score=46.23 Aligned_cols=72 Identities=21% Similarity=0.102 Sum_probs=60.7
Q ss_pred hhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhH
Q psy10046 675 VIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNY 749 (805)
Q Consensus 675 ~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~ 749 (805)
+.+.-.+|...++.++|..+++++.+...++-++|.+...++.++ .+++..+..+++.+.+.++.+.+ .++.
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~--~~~~~~~~~~l~~~~~~~~~ma~-~~~~ 80 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH--SRPRRLLRAGLLLTVLSTAAMAL-THSF 80 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHH-Hhch
Confidence 444557888889999999999999999999999999999999888 77888888888888888888773 3433
No 275
>KOG0637|consensus
Probab=95.14 E-value=0.059 Score=60.21 Aligned_cols=138 Identities=17% Similarity=0.144 Sum_probs=91.7
Q ss_pred HHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCC--CCccchhHHHHH-HHHHHHHHhhhh
Q psy10046 667 TILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQ--PWLNVKKTYAAC-LIGCGVSTALMP 743 (805)
Q Consensus 667 ~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr--~~~gr~~~~~~~-~~~~~i~~l~~~ 743 (805)
.+..-+++..=..|++.|++..|.+..-.+.+....-+.+++..++.|..+|| -++|||+-++.. .+...+.+++++
T Consensus 41 a~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig 120 (498)
T KOG0637|consen 41 AAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIG 120 (498)
T ss_pred HHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhh
Confidence 33333444445679999999999998888887777778889999999999998 347777765544 333444455444
Q ss_pred hhh-------hh--H--HHHHHHHHHHh-----hhhhhhchhhhhhhhhccCccchhh-hhHHHHHHHhhhhccCCCC
Q psy10046 744 LFA-------TN--Y--WALLFTCLSFG-----IFFASNFSCTPIILVELVPLDRFAT-AYGLTLLAQGIGNLVGPPL 804 (805)
Q Consensus 744 ~~~-------~~--~--~~~~~~~~l~G-----~~~g~~~~~~~~~~~~~~~~~~~~~-a~gl~~~~~~ig~~igp~i 804 (805)
... .+ . ....+...+.| ++.-......-+++.++...+.+.+ +++.+..+.++|+.+|=.+
T Consensus 121 ~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~ 198 (498)
T KOG0637|consen 121 YAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYAL 198 (498)
T ss_pred hHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeec
Confidence 211 00 1 11222223333 3333555666788999988777777 9999999999999887543
No 276
>KOG3097|consensus
Probab=94.95 E-value=0.15 Score=54.63 Aligned_cols=72 Identities=8% Similarity=0.022 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy10046 208 MAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWF 281 (805)
Q Consensus 208 ~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~ 281 (805)
.+..+...++.+.+..++|-|+.+++++..+...... -+-+.+..++- ...+.|+|.++.+..-.++++..-
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVP-a~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVP-AGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhcc-HHHhhccccccccccCcceecHHH
Confidence 3444555666668999999999999988877665432 23355666644 468889999998887777776543
No 277
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.67 E-value=0.6 Score=48.75 Aligned_cols=54 Identities=15% Similarity=0.184 Sum_probs=29.7
Q ss_pred chhHHHHHHHHHhhHHHhhHHHH--HH---HHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 284 KRGLACSLGSTGTGFGTTVYAPI--TS---YLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 284 ~rg~a~gi~~~~~~lG~~lgp~i--~~---~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
+|+....+-..++.+|.++.-+. .. .-.-...|++++.+.+++.++.+++..++
T Consensus 3 ~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 3 KKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred ccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444444455566665543222 22 00112359999998887776666665554
No 278
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.32 E-value=0.38 Score=55.00 Aligned_cols=120 Identities=14% Similarity=0.167 Sum_probs=91.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-c---------CcHHHHHHHHHHHHHH
Q psy10046 195 ASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCF-S---------RTIEHMYLTFGLLAGI 264 (805)
Q Consensus 195 ~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~-a---------~~~~~l~i~~R~l~G~ 264 (805)
.++...+.+..+..++..+|..++..+.-+..-|+++.++.++.++..+.... . ++. ++.++--++..+
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~-~f~lgd~~l~~~ 330 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQ-WFALGDTILEEV 330 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCe-EEEEEhHHHHHH
Confidence 78888888888888999999999988888888888888888777766554221 1 122 222333466666
Q ss_pred HHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc
Q psy10046 265 GLALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSYLISEYG 315 (805)
Q Consensus 265 g~g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g 315 (805)
..+..+-+...++++..| ..-|...+++....++|..++..++..+.+.+|
T Consensus 331 ~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 331 IGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 666666777777888888 458999999999999999999999999887655
No 279
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.22 E-value=1.2 Score=50.01 Aligned_cols=110 Identities=15% Similarity=0.115 Sum_probs=73.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH--HHH---HHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Q psy10046 197 KSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIIS--GVG---FVLSCFSRTIEHMYLTFGLLAGIGLALSYV 271 (805)
Q Consensus 197 ~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~--~i~---~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~ 271 (805)
..+.-+...+|.+|-.++.--.. .+--|++.+.+.+-. .+. ....-+.++.|.+++ .-+..|+.+|..++
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~----~~rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~-lif~eGLlGGa~YV 354 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLP----FFRIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFV-LIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhccee----eeehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHhhhHHHH
Confidence 45666777777776555543221 122244433333222 222 222335678887755 45899999999999
Q ss_pred HHHHHHhhhc-ccchhHHHHHHHHHhhHHHhhHHHHHHHHh
Q psy10046 272 TAVVSIAFWF-EKKRGLACSLGSTGTGFGTTVYAPITSYLI 311 (805)
Q Consensus 272 ~~~~~l~~~~-p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~ 311 (805)
.....+.+-. +++|..++|+...+-.+|.+++.+++-++-
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9998888444 588999999999999999999888876553
No 280
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.16 E-value=0.012 Score=68.88 Aligned_cols=138 Identities=13% Similarity=0.086 Sum_probs=2.8
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhh
Q psy10046 664 SISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMP 743 (805)
Q Consensus 664 ~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~ 743 (805)
++..+++.+........++++-+.++++..++|++.+.+-++.++..++..++..| ..|.+++.++.++.+++.+++.
T Consensus 9 ~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~--~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 9 CLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR--GHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCcceeeecHHHHHHHHHHHh
Confidence 33444444444444555666666789999999999999999999999999999999 7788888888888888877653
Q ss_pred hh--hh-----------------------------------------------hHHHHHHHHHHHhhhhhhhchhhhhhh
Q psy10046 744 LF--AT-----------------------------------------------NYWALLFTCLSFGIFFASNFSCTPIIL 774 (805)
Q Consensus 744 ~~--~~-----------------------------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~~ 774 (805)
+. .. .++.+++..++.|+|....+++..+++
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 20 00 012355667788999999999999999
Q ss_pred hhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 775 VELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 775 ~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
-|.++++..+...|+.+++..+|-++|=.
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~ 195 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFL 195 (539)
T ss_dssp -----------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHH
Confidence 99999999998889988887777766643
No 281
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.92 E-value=0.017 Score=62.85 Aligned_cols=107 Identities=11% Similarity=0.042 Sum_probs=3.5
Q ss_pred HHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhh------------hhhHHHHHHHHHHHhhhhh
Q psy10046 697 SILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLF------------ATNYWALLFTCLSFGIFFA 764 (805)
Q Consensus 697 ~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~------------~~~~~~~~~~~~l~G~~~g 764 (805)
.++..++++..+||.+.+|..-+ ..++|+++. ..+.=.+..-++.++ ..+.+..++.++++|+.-|
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~-~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNG 263 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWP-GPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNG 263 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEec-ccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccc
Confidence 35668899999999998885422 113444333 222211111111111 1244556777889999988
Q ss_pred hhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCCCC
Q psy10046 765 SNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPPLA 805 (805)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ia 805 (805)
-..++...+.++.++++++..+-.+..++-.+|-.+|..++
T Consensus 264 yl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 264 YLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ---HHHH----------------------------------
T ss_pred hhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999888888888887778788887776653
No 282
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=92.02 E-value=6 Score=43.01 Aligned_cols=117 Identities=14% Similarity=0.169 Sum_probs=70.8
Q ss_pred CchhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHH
Q psy10046 158 GGWGWMVVLAAFFINMAGDGIAFSFGLLYIEFLNE-FGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGI 236 (805)
Q Consensus 158 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~ 236 (805)
.+|+|.++++.+++.++...+-.+... +... +|-...+.+++.+.|.+.+++|+.+.-++.|.--.-+.+.+=.+
T Consensus 6 ~~~~alL~laVf~~aa~GlvyElal~t----LatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vEll 81 (508)
T COG4262 6 NRWRALLLLAVFVCAACGLVYELALGT----LATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELL 81 (508)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHH----HHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHH
Confidence 347788877777777665444444433 3343 35567789999999999999999998888774322211111111
Q ss_pred HHHHH-----HHHHHhc----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10046 237 ISGVG-----FVLSCFS----RTIEHMYLTFGLLAGIGLALSYVTAVVSIAF 279 (805)
Q Consensus 237 l~~i~-----~i~~a~a----~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~ 279 (805)
+..++ .+-..|+ ++-+.+++ .-++.|.-.|.-.|..+.++.+
T Consensus 82 lgligg~Sa~~ly~~FA~~~~~~~~Vly~-lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 82 LGLIGGVSAAALYLLFALESAPSRLVLYA-LTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHhccchHHHHHHHHHhccchHHHHHHH-HHHHHHHHHhcchHHHHHHHHH
Confidence 11111 1111233 23444444 4677888888888888888775
No 283
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=91.72 E-value=29 Score=39.80 Aligned_cols=124 Identities=10% Similarity=-0.003 Sum_probs=83.5
Q ss_pred HHHHHhCC---ChhHHHHHHHHHHH-HHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhc---------Cc----
Q psy10046 188 EFLNEFGA---SKSKTAWIGSLFMA-VPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFS---------RT---- 250 (805)
Q Consensus 188 ~i~~~~g~---s~~~~~l~~s~~~l-g~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a---------~~---- 250 (805)
.+.+.+.+ .+..+.++-+.+.+ +..+..++.+++++++-+.+++.+.+..+....+++++. ++
T Consensus 48 ~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~ 127 (509)
T COG3202 48 SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFS 127 (509)
T ss_pred HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHH
Confidence 44555543 45667888888888 778888999999999999999888888887777777653 11
Q ss_pred -------------------HHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHH
Q psy10046 251 -------------------IEHMYLTFGLLAGIGLALSYVTA-VVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSY 309 (805)
Q Consensus 251 -------------------~~~l~i~~R~l~G~g~g~~~~~~-~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~ 309 (805)
.|..-+ +-++.=+-.+...... .....+... ++-.+..+++..+.+++..++..+..+
T Consensus 128 ~~~~~~~p~~l~~~ili~~~Ws~s~-~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~ 206 (509)
T COG3202 128 RDLFADLPMFLKWFILIVGEWSYSL-FYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSW 206 (509)
T ss_pred HHHHhhCCccceeeeEeecchHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 022211 1122223233333322 223335565 677889999999999999999888888
Q ss_pred Hhh
Q psy10046 310 LIS 312 (805)
Q Consensus 310 l~~ 312 (805)
+..
T Consensus 207 ~~k 209 (509)
T COG3202 207 LSK 209 (509)
T ss_pred Hhh
Confidence 876
No 284
>KOG3880|consensus
Probab=91.36 E-value=1.1 Score=47.82 Aligned_cols=132 Identities=17% Similarity=0.136 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy10046 201 AWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFW 280 (805)
Q Consensus 201 ~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~ 280 (805)
+.+.-.-.+...+..+.+..+.||+.-..=..+..++.+.+.++.+++++.++-+++ -++..++.|..-..-.++-+.+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~G-V~~aSissGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLG-VVFASISSGLGEITFLALSSRY 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhh-hhhhhhcCCcceeehhhhhccC
Confidence 334444445555556666677787543333344455667777888999988877564 4566666654433322222222
Q ss_pred cccchhHHHHHHHHHhhHHHhhHHHHHHHHhhc--cchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 281 FEKKRGLACSLGSTGTGFGTTVYAPITSYLISE--YGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 281 ~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~--~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
....++.|..+.+.++.+|..-..++.+. ..-|.+.++...+.++.++..++.
T Consensus 144 ----~~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~l 198 (409)
T KOG3880|consen 144 ----PSIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFL 198 (409)
T ss_pred ----CCceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhe
Confidence 23345667777777777877766666653 456778887777666666555554
No 285
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=90.74 E-value=0.58 Score=52.48 Aligned_cols=127 Identities=14% Similarity=0.137 Sum_probs=86.4
Q ss_pred hhhhhhhhHHHHHHh--cCCChhhHHHHHHHHH-HHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhhhH
Q psy10046 673 WFVIPYFYLTDFVTN--QGLSKEEATSILSYIG-VTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFATNY 749 (805)
Q Consensus 673 ~~~~~~~~lp~~~~~--~G~s~~~a~~~~~~~~-i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~~~ 749 (805)
-+-..--|+..|+.+ +|++..+..--+.+.+ -..++.-+...++.|. .+-|.++++..+...+..+++. ..++.
T Consensus 18 ~frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~--l~Ykpviil~~~~~i~t~~lll-~~~sv 94 (412)
T PF01770_consen 18 EFRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY--LRYKPVIILQALSYIITWLLLL-FGTSV 94 (412)
T ss_pred hcCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHHHHH-HHCcH
Confidence 334445577778765 7999888765433333 3444555677788999 7777777776666555554444 57888
Q ss_pred HHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 750 WALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 750 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
..+-+.-+++|++.++ -...+.++-..+++++.-.+.+......-+|.++|..
T Consensus 95 ~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~ 147 (412)
T PF01770_consen 95 LAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSL 147 (412)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999987766 3344566666778888888887777777666655543
No 286
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=90.33 E-value=12 Score=42.63 Aligned_cols=125 Identities=18% Similarity=0.108 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH---hcCc----HH
Q psy10046 180 FSFGLLYIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSC---FSRT----IE 252 (805)
Q Consensus 180 ~~~~~~~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a---~a~~----~~ 252 (805)
.+++..+..+...-|++...+|..-++..+....+..++.++.+|+|..+.-+++...-.+...++. +.+. ..
T Consensus 275 Lsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~ 354 (432)
T PF06963_consen 275 LSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSI 354 (432)
T ss_pred hcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhh
Confidence 3444454555666699999999999999999999999999999999988776666554333322222 2222 22
Q ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHH
Q psy10046 253 HMYLTFGLLAGIGL-----ALSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPIT 307 (805)
Q Consensus 253 ~l~i~~R~l~G~g~-----g~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~ 307 (805)
.. .-++.|+.. =+...+..-++.+..| ++||...|.-.....+--.+--.++
T Consensus 355 s~---~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 355 SA---YLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HH---HHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 21 123444433 3344555566667777 7799999988877776665544433
No 287
>PRK03612 spermidine synthase; Provisional
Probab=88.63 E-value=1.9 Score=50.43 Aligned_cols=113 Identities=17% Similarity=0.140 Sum_probs=61.1
Q ss_pred cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHH-HHHHHH-HHHHhhhhhh-h---hhHHHHHHHHHHHhh
Q psy10046 688 QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYA-ACLIGC-GVSTALMPLF-A---TNYWALLFTCLSFGI 761 (805)
Q Consensus 688 ~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~-~~~~~~-~i~~l~~~~~-~---~~~~~~~~~~~l~G~ 761 (805)
.|.+....+.+++.+-++..+|+.+++++.++ ..++.... +...+. +++..++... . .....++..+++.++
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~--~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 122 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD--AAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL 122 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68888888888888888888888888877644 22222111 111111 1111111100 0 111223444556677
Q ss_pred hhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccCCC
Q psy10046 762 FFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVGPP 803 (805)
Q Consensus 762 ~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~igp~ 803 (805)
..|+.+|+..-+..+.. .+..+...|-.+.+..+|+++|..
T Consensus 123 l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l 163 (521)
T PRK03612 123 LIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGL 163 (521)
T ss_pred HHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHH
Confidence 88888777666555432 223455566666666666666643
No 288
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=88.13 E-value=4.2 Score=42.65 Aligned_cols=94 Identities=18% Similarity=0.137 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHH----HHHHHHHHHHHHHHh-cC----cHHHHHHHHHHHHHHHHHHH
Q psy10046 200 TAWIGSLFMAVPLLLGPVASAFVEK-FGCRSMTI----VAGIISGVGFVLSCF-SR----TIEHMYLTFGLLAGIGLALS 269 (805)
Q Consensus 200 ~~l~~s~~~lg~~ig~l~~G~LsDr-~Grr~vli----i~~~l~~i~~i~~a~-a~----~~~~l~i~~R~l~G~g~g~~ 269 (805)
.....-++..|+.+|+...|++... +-||+.+. .+++++.+..++.+. .. ++..+++ +.|+.|++.=+.
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I-~~Fl~G~f~Wgi 221 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYI-FGFLAGFFLWGI 221 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHH-HHHHHHHHHHhh
Confidence 3556667778888888989998874 56666544 334444444444212 22 2344444 466766655333
Q ss_pred HHHHHHHHhhhc---ccchhHHHHHHHH
Q psy10046 270 YVTAVVSIAFWF---EKKRGLACSLGST 294 (805)
Q Consensus 270 ~~~~~~~l~~~~---p~~rg~a~gi~~~ 294 (805)
.++....-.|+- |++-|...|+...
T Consensus 222 Q~ViL~lPhEyK~~~pk~ig~~Fg~iWG 249 (267)
T PF07672_consen 222 QGVILNLPHEYKGYNPKKIGIQFGLIWG 249 (267)
T ss_pred hHHHhcChhhhcCCCcceehhHHHHHHH
Confidence 333322222432 3445555554443
No 289
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=87.09 E-value=65 Score=37.26 Aligned_cols=70 Identities=20% Similarity=0.218 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc--cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHH
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFE--KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFN 329 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p--~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~ 329 (805)
++.|+.........-..+.+.+| .+|...+|-+....++..++..++++.+....||.....+.-++.++
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 44555555666666666676766 56899999998888888877777789999999999988877665555
No 290
>PRK10263 DNA translocase FtsK; Provisional
Probab=78.90 E-value=19 Score=45.95 Aligned_cols=22 Identities=14% Similarity=0.018 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhCC
Q psy10046 206 LFMAVPLLLGPVASAFVEKFGC 227 (805)
Q Consensus 206 ~~~lg~~ig~l~~G~LsDr~Gr 227 (805)
+-.++..+|..+...+.-.||-
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhH
Confidence 3445555556666555556663
No 291
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=77.97 E-value=1.4e+02 Score=34.64 Aligned_cols=71 Identities=20% Similarity=0.224 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc--cchhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHH
Q psy10046 261 LAGIGLALSYVTAVVSIAFWFE--KKRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLC 331 (805)
Q Consensus 261 l~G~g~g~~~~~~~~~l~~~~p--~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~ 331 (805)
..|+.........-..+.+.+| +++...+|-+....++-..+..++++.+....||+....+.-++.++..
T Consensus 291 ~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~ 363 (491)
T PF03219_consen 291 AYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITG 363 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHH
Confidence 3444444444444455555665 4577778888877777777777888999999999998877655444433
No 292
>KOG3626|consensus
Probab=76.78 E-value=2.3 Score=51.01 Aligned_cols=133 Identities=13% Similarity=0.077 Sum_probs=96.7
Q ss_pred HHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhh
Q psy10046 667 TILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFA 746 (805)
Q Consensus 667 ~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~ 746 (805)
.+...+....+..-+.++=+.++++..+.|++.+.+-+++++..+...+..-| ..|.+++.++.++++++.+++.+..
T Consensus 106 ~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r--~HrPr~Ig~G~~~m~lgsll~alPH 183 (735)
T KOG3626|consen 106 AFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSR--GHRPRWIGIGLVLMGLGSLLFALPH 183 (735)
T ss_pred HHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccc--cCccceeeechhHHHHHHHHHhChH
Confidence 33333333333333444434579999999999999999999999999999999 7788888888888888776654210
Q ss_pred ------------------------------------------------hh--HH-HHHHHHHHHhhhhhhhchhhhhhhh
Q psy10046 747 ------------------------------------------------TN--YW-ALLFTCLSFGIFFASNFSCTPIILV 775 (805)
Q Consensus 747 ------------------------------------------------~~--~~-~~~~~~~l~G~~~g~~~~~~~~~~~ 775 (805)
.+ ++ .+++..++.|+|....+++...++-
T Consensus 184 f~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiD 263 (735)
T KOG3626|consen 184 FFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYID 263 (735)
T ss_pred HhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccc
Confidence 00 12 3455667889999999999999999
Q ss_pred hccCccchhhhhHHHHHHHhhhhccC
Q psy10046 776 ELVPLDRFATAYGLTLLAQGIGNLVG 801 (805)
Q Consensus 776 ~~~~~~~~~~a~gl~~~~~~ig~~ig 801 (805)
|-+..++-+...|+.+.+..+|=++|
T Consensus 264 Dnvk~~~SplYlgi~~~~~~lGPaiG 289 (735)
T KOG3626|consen 264 DNVKKKNSPLYLGILYSMAILGPAIG 289 (735)
T ss_pred ccccccCCcHHHHHHHHHHHhhhHHH
Confidence 99999988888888887776665554
No 293
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=70.07 E-value=1.3e+02 Score=34.35 Aligned_cols=107 Identities=15% Similarity=0.016 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCh--HHHHHH--HHHHHHHHHHHHhc---------CcHHHHHHHHHHHHHHHHH
Q psy10046 201 AWIGSLFMAVPLLLGPVASAFVEKFGCR--SMTIVA--GIISGVGFVLSCFS---------RTIEHMYLTFGLLAGIGLA 267 (805)
Q Consensus 201 ~l~~s~~~lg~~ig~l~~G~LsDr~Grr--~vlii~--~~l~~i~~i~~a~a---------~~~~~l~i~~R~l~G~g~g 267 (805)
-++..+|.+|=.+|..+..+. ..-++| ++++.+ =+++....++|..- ++-+..++ +-++.|+..|
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~-~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~-~~~l~gltnG 387 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKF-MWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFII-LMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHhhhhhee-EeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHH-HHHHHHHhhh
Confidence 445566666666666544322 111223 333322 23344444444332 23344434 4588899988
Q ss_pred HHHHHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHHHH
Q psy10046 268 LSYVTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPITSY 309 (805)
Q Consensus 268 ~~~~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~~~ 309 (805)
-.......+..+..+ ++|..+-.+...+..+|..+|..++-.
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877777777665554 778888888888888888888776543
No 294
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=66.60 E-value=1.5e+02 Score=31.89 Aligned_cols=40 Identities=18% Similarity=0.036 Sum_probs=24.7
Q ss_pred hhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHH
Q psy10046 285 RGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLS 324 (805)
Q Consensus 285 rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~ 324 (805)
....-+++.+..-.-+.+|.++++.+...+||.|.=-+.+
T Consensus 153 lN~r~a~LHvl~D~Lgsv~vIia~i~i~~~~w~~~Dpi~s 192 (296)
T COG1230 153 LNMRGAYLHVLGDALGSVGVIIAAIVIRFTGWSWLDPILS 192 (296)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccchHHH
Confidence 4444455555444444477788888887889998544443
No 295
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=66.11 E-value=1.5e+02 Score=29.86 Aligned_cols=37 Identities=16% Similarity=0.021 Sum_probs=21.0
Q ss_pred HHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHH
Q psy10046 289 CSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGT 326 (805)
Q Consensus 289 ~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~ 326 (805)
-.......-++.++|..+++++....+. +.+++.+++
T Consensus 164 ~~~~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~ 200 (209)
T PF06912_consen 164 RALRYLLIILSFFIGAILGALLYRRLGF-WALLLPALL 200 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence 3344455555666667777777776674 444444433
No 296
>KOG1237|consensus
Probab=65.10 E-value=23 Score=41.97 Aligned_cols=129 Identities=13% Similarity=-0.020 Sum_probs=84.7
Q ss_pred HHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhhhhhhhh--
Q psy10046 671 FTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTALMPLFAT-- 747 (805)
Q Consensus 671 ~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~~~~~~~-- 747 (805)
.+++++....+..|+.. .+.+...+.-.+..++.......+++++++|- ++||.+++.++.++..+++++++....
T Consensus 50 ~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~-f~gry~tI~~~s~i~~~G~~~lt~~a~~~ 128 (571)
T KOG1237|consen 50 RLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADS-FLGRYFTINIGSLISLLGLFGLTLSAMIP 128 (571)
T ss_pred HHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444445556666654 67766777778888888888888999999997 378999888887777666544432110
Q ss_pred -------------------h---HHHHHHHHHHHhhhhhhhchhhhhhhhhccC---c-cchh--hhhHHHHHHHhhhhc
Q psy10046 748 -------------------N---YWALLFTCLSFGIFFASNFSCTPIILVELVP---L-DRFA--TAYGLTLLAQGIGNL 799 (805)
Q Consensus 748 -------------------~---~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~---~-~~~~--~a~gl~~~~~~ig~~ 799 (805)
+ ...++....+..+|.|+.-++...+-++.++ + +.+. .-+..++...++|.+
T Consensus 129 ~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l 208 (571)
T KOG1237|consen 129 ALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGAL 208 (571)
T ss_pred hcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHH
Confidence 0 1234455556667888989999999999887 2 2222 444555555565554
Q ss_pred c
Q psy10046 800 V 800 (805)
Q Consensus 800 i 800 (805)
+
T Consensus 209 ~ 209 (571)
T KOG1237|consen 209 L 209 (571)
T ss_pred H
Confidence 4
No 297
>KOG3574|consensus
Probab=64.25 E-value=22 Score=39.44 Aligned_cols=140 Identities=13% Similarity=0.045 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecC-----CCCccchhH-HHHH
Q psy10046 658 LHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACD-----QPWLNVKKT-YAAC 731 (805)
Q Consensus 658 ~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~d-----r~~~gr~~~-~~~~ 731 (805)
+.++.+.+...++.+.++... -+|.+++..|.|-...+.....++= .---+++..++| | +|||+. ++-+
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~--~GrrksWvvp~ 105 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKR--FGRRKSWVVPC 105 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHh--hccccceeeeh
Confidence 344555555555655555444 7898998888876655443222111 112367777888 6 887774 4444
Q ss_pred HHHHHHHHhhhhhhhh--------hH--HHHHHHHHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhccC
Q psy10046 732 LIGCGVSTALMPLFAT--------NY--WALLFTCLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLVG 801 (805)
Q Consensus 732 ~~~~~i~~l~~~~~~~--------~~--~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~ig 801 (805)
..+.+..++++..... .+ .......++.-|..+.--..+-.+......++..|-+.-.....+.+|.++|
T Consensus 106 q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 106 QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 5555555555432111 11 1111122222222222222344555556667777777766667777776665
Q ss_pred C
Q psy10046 802 P 802 (805)
Q Consensus 802 p 802 (805)
-
T Consensus 186 ~ 186 (510)
T KOG3574|consen 186 N 186 (510)
T ss_pred c
Confidence 4
No 298
>KOG2601|consensus
Probab=56.94 E-value=3.3e+02 Score=30.61 Aligned_cols=118 Identities=14% Similarity=0.116 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH------HHhc------CcHHHHHHHHHHHHHHHHH--HHHHHHH
Q psy10046 209 AVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVL------SCFS------RTIEHMYLTFGLLAGIGLA--LSYVTAV 274 (805)
Q Consensus 209 lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~------~a~a------~~~~~l~i~~R~l~G~g~g--~~~~~~~ 274 (805)
....+..++.|...|+..|++++...+++--++.++ ..+. .++..+.. +-++.-..++ -....+.
T Consensus 74 gs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~-~lvLa~~i~aI~~Las~A~ 152 (503)
T KOG2601|consen 74 GSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTV-CLVLANLIAAIAVLASLAG 152 (503)
T ss_pred hHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHH-HHHHHHHHHHHHHHHHhhh
Confidence 344556667778889999999887766543322222 2222 24444422 3222221111 1112222
Q ss_pred HHHh--hhc----c-cchhHHH---HHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHH
Q psy10046 275 VSIA--FWF----E-KKRGLAC---SLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTF 327 (805)
Q Consensus 275 ~~l~--~~~----p-~~rg~a~---gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~ 327 (805)
.++. +|. . +.+.... +..-..-..-..+.|.+.|.+....+-|..-.+.++..
T Consensus 153 ~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~ 215 (503)
T KOG2601|consen 153 TILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWA 215 (503)
T ss_pred eEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHH
Confidence 2221 443 1 2233333 33333444556788888998888877776544444433
No 299
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=55.61 E-value=1.9e+02 Score=35.56 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=18.1
Q ss_pred HHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHH
Q psy10046 294 TGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTF 327 (805)
Q Consensus 294 ~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~ 327 (805)
.+..++.++..+++.+++..++|...+++.++++
T Consensus 108 ~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 108 PVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 3344555555555555545566766665544443
No 300
>KOG3880|consensus
Probab=54.59 E-value=43 Score=36.26 Aligned_cols=107 Identities=16% Similarity=0.096 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHH-----HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Q psy10046 198 SKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMT-----IVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVT 272 (805)
Q Consensus 198 ~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vl-----ii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~ 272 (805)
.|.-|....|.+|..+..--. .-+--+... -.-.+++.+...+..+.++++..++ .-+.-|+-+|..++.
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~----~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~-lI~~EGLlGGasYVN 362 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSI----NLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFA-LILFEGLLGGASYVN 362 (409)
T ss_pred hcchhhheeeeeeEEEEeccc----eEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHHHHhhcCchHHHH
Confidence 357788888887754432111 111111111 1223445555566677888887755 457889988888887
Q ss_pred HHHHHh-hhcccchhHHHHHHHHHhhHHHhhHHHHHHH
Q psy10046 273 AVVSIA-FWFEKKRGLACSLGSTGTGFGTTVYAPITSY 309 (805)
Q Consensus 273 ~~~~l~-~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~ 309 (805)
..--+. +..|++|-.+|+....+-.+|..++.+++-.
T Consensus 363 Tf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 363 TFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 777677 6778999999999998888888777666543
No 301
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=52.87 E-value=14 Score=41.20 Aligned_cols=78 Identities=15% Similarity=0.046 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhh--h------hHHHHHHHHHHHhhhhhhhchhhhhhhhhccCcc---chhhhhHHHHHHH
Q psy10046 726 KTYAACLIGCGVSTALMPLFA--T------NYWALLFTCLSFGIFFASNFSCTPIILVELVPLD---RFATAYGLTLLAQ 794 (805)
Q Consensus 726 ~~~~~~~~~~~i~~l~~~~~~--~------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~---~~~~a~gl~~~~~ 794 (805)
+++.++.++..++.+++.+.. . ....+++.++++++|.|+.=++..++..+.++.+ ++...+..+++..
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 445556666655555533211 1 2346777788889999999999999999999854 4567777888888
Q ss_pred hhhhccCCC
Q psy10046 795 GIGNLVGPP 803 (805)
Q Consensus 795 ~ig~~igp~ 803 (805)
++|+++++.
T Consensus 82 n~G~~~~~~ 90 (372)
T PF00854_consen 82 NIGSLFSPT 90 (372)
T ss_dssp HHHHHHHHH
T ss_pred hhhhHhhcc
Confidence 999887643
No 302
>KOG4830|consensus
Probab=51.94 E-value=22 Score=37.27 Aligned_cols=142 Identities=18% Similarity=0.121 Sum_probs=74.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHh-cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchh-HHH
Q psy10046 652 FSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTN-QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKK-TYA 729 (805)
Q Consensus 652 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~-~~~ 729 (805)
..+|++-+|.-..+...+.-........|++.|..+ ..++...-.++-.+..+.+...+.+..-+.-. -.|++ .+.
T Consensus 195 ~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwn--gkrlKayYs 272 (412)
T KOG4830|consen 195 TSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWN--GKRLKAYYS 272 (412)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcC--cceeeeeee
Confidence 456777777777777777666677777788888753 67766666666556666666555544333222 12222 222
Q ss_pred HHHHH---HHHHHhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhccC--ccchhhhhHHHHHHHhhh
Q psy10046 730 ACLIG---CGVSTALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVELVP--LDRFATAYGLTLLAQGIG 797 (805)
Q Consensus 730 ~~~~~---~~i~~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~--~~~~~~a~gl~~~~~~ig 797 (805)
.+.++ ++..+++++ ..-+ ..++...+++|+..+........+.+.+.+ .+..+..+|..+.+-.+.
T Consensus 273 aGgiiwifcga~ilLlp-r~i~-symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS 343 (412)
T KOG4830|consen 273 AGGIIWIFCGAVILLLP-RGIK-SYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLS 343 (412)
T ss_pred cccHHHHHhhhheeecc-cchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhc
Confidence 22222 233333333 1111 223444555677666555544455555555 334445556555554433
No 303
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=48.58 E-value=1.1e+02 Score=32.61 Aligned_cols=36 Identities=8% Similarity=-0.038 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Q psy10046 232 IVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLA 267 (805)
Q Consensus 232 ii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g 267 (805)
+++++++++.+++..+.....++++..-++.+|+.+
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 445555655555555544333332322234444443
No 304
>COG4721 ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]
Probab=44.03 E-value=3.2e+02 Score=26.70 Aligned_cols=59 Identities=22% Similarity=0.316 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccchhH-HHHHHHHHhhHHHhhHHHHH-----HHHhhccchHHHHHHHHHHH
Q psy10046 258 FGLLAGIGLALSYVTAVVSIAFWFEKKRGL-ACSLGSTGTGFGTTVYAPIT-----SYLISEYGWRGTVLLLSGTF 327 (805)
Q Consensus 258 ~R~l~G~g~g~~~~~~~~~l~~~~p~~rg~-a~gi~~~~~~lG~~lgp~i~-----~~l~~~~gWr~~f~i~~~~~ 327 (805)
..+.||+|.-..+... +.|.. .+.. +..++|..++.++. |++....||...+.+.-.++
T Consensus 97 sgfvQGlgaE~vFa~~---------kyr~~Sl~~~--mlagmg~~~~sf~~eyf~~Gyla~s~~fnli~lv~rlIS 161 (192)
T COG4721 97 SGFVQGLGAEFVFAVT---------KYRYYSLPVL--MLAGMGITLASFVYEYFKLGYLAFSLGFNLILLVVRLIS 161 (192)
T ss_pred HHHHHhhhhhHHHHHH---------HHHHhhHHHH--HHHhhchhHHHHHHHHHHHhHHhhccchhHHHHHHHHHH
Confidence 5789999877655432 11211 1111 12233333333333 56666778887766654443
No 305
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=44.01 E-value=1.5e+02 Score=36.14 Aligned_cols=52 Identities=12% Similarity=0.027 Sum_probs=32.8
Q ss_pred HHHHHHHhh----hCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Q psy10046 216 PVASAFVEK----FGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLA 267 (805)
Q Consensus 216 l~~G~LsDr----~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g 267 (805)
.+++-+.|. -||.+-++++.++++++++...+...+.++++..-++.+|+.+
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 344556663 4567788999999999988888766555553432233444433
No 306
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=43.94 E-value=32 Score=35.36 Aligned_cols=50 Identities=8% Similarity=0.109 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHH
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSY 309 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~ 309 (805)
.-.|+|.|..++++.+.+...+|+.....+++-.....+..+.|-.+.-|
T Consensus 179 MasGvGSgSMMaAa~~aL~~~~P~~a~~i~A~AaaSNllt~~~G~Y~~if 228 (241)
T PF11299_consen 179 MASGVGSGSMMAAASGALAAAYPEMADQILAFAAASNLLTSVTGLYMSIF 228 (241)
T ss_pred HHcCCcHHHHHHHHHHHHHHHCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999989888888888888766666666655555555555444433
No 307
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=43.63 E-value=87 Score=30.20 Aligned_cols=35 Identities=9% Similarity=0.038 Sum_probs=25.3
Q ss_pred HHHHHHHHHHh-hhcccchhHHHHHHHHHhhHHHhh
Q psy10046 268 LSYVTAVVSIA-FWFEKKRGLACSLGSTGTGFGTTV 302 (805)
Q Consensus 268 ~~~~~~~~~l~-~~~p~~rg~a~gi~~~~~~lG~~l 302 (805)
+...+.+.+++ .|-+++-|..+|+-.+-.+++-+.
T Consensus 110 gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 110 GLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 34455566666 888888999999888777776543
No 308
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=43.06 E-value=1.7e+02 Score=35.73 Aligned_cols=49 Identities=14% Similarity=0.035 Sum_probs=30.6
Q ss_pred HHHHHhh----hCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Q psy10046 218 ASAFVEK----FGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGL 266 (805)
Q Consensus 218 ~G~LsDr----~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~ 266 (805)
++.++|. -||.+-++++.+++.++++...+...+.++++..-++.+|+.
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 3556663 466777888899999888887766555544343223444433
No 309
>PRK15015 carbon starvation protein A; Provisional
Probab=42.20 E-value=3.8e+02 Score=32.16 Aligned_cols=281 Identities=10% Similarity=0.018 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhcccc
Q psy10046 206 LFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIA-FWFEKK 284 (805)
Q Consensus 206 ~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~-~~~p~~ 284 (805)
+..+...+|..-++.++-.-|-. +-+..+..++..+...+-.+..-++. +=+.+.=-.-..|+..-.=. ++.|.+
T Consensus 9 ~w~~~a~~ga~~~~~~al~rge~---mnal~lv~aa~~~y~iaYrfYgr~ia-~kv~~lD~~r~TPA~~~~DG~DYvPt~ 84 (701)
T PRK15015 9 VWTVLSVMGAFALGYIALNRGEQ---INALWIVVASVCIYLIAYRFYGLYIA-KNVLAVDPTRMTPAVRHNDGLDYVPTD 84 (701)
T ss_pred HHHHHHHHHHHHheeeeecCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHH-HHhccCCCCCCCCceECCCCCCcCcCC
Q ss_pred hhHHHHH-HHHHhhHHHhhHHHHHHHHhhccchH-HHHHHHHHHHHHHHHHHHhccCCchhhhhhchHHHHHhhhccCCC
Q psy10046 285 RGLACSL-GSTGTGFGTTVYAPITSYLISEYGWR-GTVLLLSGTFFNLCVCGAIMRDPEWWTLEQNKEKDLKSIKGASSC 362 (805)
Q Consensus 285 rg~a~gi-~~~~~~lG~~lgp~i~~~l~~~~gWr-~~f~i~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~ 362 (805)
|-..+|- +....+.|+++||.++.. +||- ...|+.....+...+==+...--
T Consensus 85 k~VLfGHHFasIAGAGPivGPvlAa~----~GwlP~~LWIl~G~vf~GaVhD~~~L~~---------------------- 138 (701)
T PRK15015 85 KKVLFGHHFAAIAGAGPLVGPVLAAQ----MGYLPGMIWLLAGVVLAGAVQDFMVLFV---------------------- 138 (701)
T ss_pred ccchhHHHHHHHhccCccHHHHHHHH----HcchHHHHHHHHcceeechhhhhhheee----------------------
Q ss_pred CCcccccCCCCCCHHHHHHHHhcCCCccchhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCCCCC
Q psy10046 363 GSVSYRTESDMPDIEVLKEMLESGVTPDFIETSVATELNAETCKFSSVINIPTYIRNNEKQDVHKSSDPFTTPENPKYPE 442 (805)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (805)
T Consensus 139 -------------------------------------------------------------------------------- 138 (701)
T PRK15015 139 -------------------------------------------------------------------------------- 138 (701)
T ss_pred --------------------------------------------------------------------------------
Q ss_pred CCccccccccCCCchhhhhhhchhhhccccCCCCCCCcccccCCCCCCCCCCcccccCCCCCcccccCCCCCCCCCCccc
Q psy10046 443 PNRTAAELEDSFTAPKLRQLQKTLSAEADRASEPRGKPLVKNHSVESDGPHEPLVSAGKGNDSNRCKSMSPPGNLGRQHR 522 (805)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (805)
+.|..|+++.+-++
T Consensus 139 ---------------S~R~~GrSig~ia~--------------------------------------------------- 152 (701)
T PRK15015 139 ---------------STRRDGRSLGELVK--------------------------------------------------- 152 (701)
T ss_pred ---------------eecCCCccHHHHHH---------------------------------------------------
Q ss_pred CCCCcccccccccccCCccccccccccccchhhhhhcCCCccccccccccccccccccccccCCCcccccCccCCCcccc
Q psy10046 523 SDSTPWLRRQFSFKEQPTHYLKHLKVHRYLWVQILVNGGHRFQDFLHSKLGVRRDTNLGLLVLPGRILDHHLRDSHSCWV 602 (805)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (805)
T Consensus 153 -------------------------------------------------------------------------------- 152 (701)
T PRK15015 153 -------------------------------------------------------------------------------- 152 (701)
T ss_pred --------------------------------------------------------------------------------
Q ss_pred ccccccccccccccchhheeccccccccccccCccchhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHhhhhhhhhHH
Q psy10046 603 FDVTQIWDYSFYLAGFWIIISGILIAVIPFTENTSWMDDARELIVGMFDFSMFLELHFLLVSISTILLFTWFVIPYFYLT 682 (805)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp 682 (805)
..+=+......+....+.+.+....+.....
T Consensus 153 -------------------------------------------------~~iG~~~~~lfli~i~~iliiviAvfalvvv 183 (701)
T PRK15015 153 -------------------------------------------------EEMGPTAGVIALVACFMIMVIILAVLAMIVV 183 (701)
T ss_pred -------------------------------------------------HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccch-hHHHHHHHHHHHHHhhhhhhhhhHHHHHH------H
Q psy10046 683 DFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVK-KTYAACLIGCGVSTALMPLFATNYWALLF------T 755 (805)
Q Consensus 683 ~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~-~~~~~~~~~~~i~~l~~~~~~~~~~~~~~------~ 755 (805)
.-+.+.... .......++..++.|+...|.+.++. ..-+++.+++.+++..-.....++..... .
T Consensus 184 ~al~~sP~~--------~fsv~~tIpiAl~mG~~l~~~r~g~v~~~SiiGvvll~~aI~~G~~~~~~p~~~~~f~l~~~~ 255 (701)
T PRK15015 184 KALTHSPWG--------TYTVAFTIPLALFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVAESPTWAPYFDFTGVQ 255 (701)
T ss_pred HHHhhCcHH--------HHHHHHHHHHHHHHHHHheeecCCchHHHHHHHHHHHHHHHHHhHhhccCchhhhhcccCHhH
Q ss_pred HHHHhhhhhhhchhhhhhhhhccCccchhhhhHHHHHHHhhhhcc
Q psy10046 756 CLSFGIFFASNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNLV 800 (805)
Q Consensus 756 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~i 800 (805)
....-+.++..-+++|+++- +-|.++.++-+=+..++...-+++
T Consensus 256 w~~~L~iY~fiASvLPVWlL-LqPRDYLstfl~ig~i~llaiGil 299 (701)
T PRK15015 256 LTWMLVGYGFVAAVLPVWLL-LAPRDYLSTFLKIGTIVGLAVGIL 299 (701)
T ss_pred HHHHHHHHHHHHHHhHHHHH-hCcHHHHHHHHHHHHHHHHHHHHh
No 310
>COG2119 Predicted membrane protein [Function unknown]
Probab=41.03 E-value=2e+02 Score=28.60 Aligned_cols=56 Identities=9% Similarity=0.031 Sum_probs=38.2
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH
Q psy10046 188 EFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFV 243 (805)
Q Consensus 188 ~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i 243 (805)
.+..+++......--......++.+++.+.+.++++|+..|.+-.++.+++.+..+
T Consensus 124 aLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal 179 (190)
T COG2119 124 ALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 45667765332222233344567777888888999999999998888777766553
No 311
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=40.85 E-value=4.3e+02 Score=30.80 Aligned_cols=57 Identities=16% Similarity=0.104 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc-ccchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc
Q psy10046 258 FGLLAGIGLALSYVTAVVSIAFWF-EKKRGLACSLGSTGTGFGTTVYAPITSYLISEY 314 (805)
Q Consensus 258 ~R~l~G~g~g~~~~~~~~~l~~~~-p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~ 314 (805)
.-++.-+..-..+++..++-+... |.-=|+.|.+++...++|+-.-..+.-++++++
T Consensus 411 ~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 411 QHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 334444545555566666666555 466899999999999998754444444444443
No 312
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=40.79 E-value=1.9e+02 Score=31.90 Aligned_cols=89 Identities=16% Similarity=0.102 Sum_probs=49.6
Q ss_pred cCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhH--HHHHHHH---HHHHHhhhhh-hhhhHHHHHHHHHHHhh
Q psy10046 688 QGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKT--YAACLIG---CGVSTALMPL-FATNYWALLFTCLSFGI 761 (805)
Q Consensus 688 ~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~--~~~~~~~---~~i~~l~~~~-~~~~~~~~~~~~~l~G~ 761 (805)
.|-...+.+.+++.+-.+..+|+.+.-++.|.+..-|... +..++++ ..+..+.+.. ...+.+++++...++|.
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 4556666667776666666677776666666521111110 1111111 1112212221 22356778888888998
Q ss_pred hhhhhchhhhhhhhh
Q psy10046 762 FFASNFSCTPIILVE 776 (805)
Q Consensus 762 ~~g~~~~~~~~~~~~ 776 (805)
-.|.-.|+...++..
T Consensus 118 LVG~EiPL~mrml~~ 132 (508)
T COG4262 118 LVGAEIPLLMRMLQR 132 (508)
T ss_pred HHhcchHHHHHHHHH
Confidence 889888888777665
No 313
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=38.92 E-value=3e+02 Score=24.89 Aligned_cols=54 Identities=15% Similarity=0.222 Sum_probs=33.0
Q ss_pred HHHHHHhhhCChHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Q psy10046 217 VASAFVEKFGCRSMTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSY 270 (805)
Q Consensus 217 ~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~ 270 (805)
..=+.+|.|.|+...++..+.++++..+.+++-....+-+++-+..|+|..+..
T Consensus 19 ~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~ 72 (106)
T COG2076 19 TLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTA 72 (106)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHH
Confidence 344567777788777777777777766666553222223456666676655443
No 314
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=36.61 E-value=7.4e+02 Score=28.82 Aligned_cols=72 Identities=18% Similarity=0.081 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcc--cchhHHHHHHHHHhhHH-HhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Q psy10046 262 AGIGLALSYVTAVVSIAFWFE--KKRGLACSLGSTGTGFG-TTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVC 333 (805)
Q Consensus 262 ~G~g~g~~~~~~~~~l~~~~p--~~rg~a~gi~~~~~~lG-~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~ 333 (805)
.|++........-.-+.+.+| .++...+|-+....++- .++.-.+++-++...||-+.-.+.-++.++..++
T Consensus 294 Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~l 368 (509)
T COG3202 294 YGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVL 368 (509)
T ss_pred HHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 344444444444444555565 34777777777666665 5566777888889999998877766555555433
No 315
>PF13782 SpoVAB: Stage V sporulation protein AB
Probab=34.97 E-value=2.5e+02 Score=25.49 Aligned_cols=47 Identities=21% Similarity=0.270 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcc--cch---hHHHHHHHHHhhHHHhhHHH
Q psy10046 258 FGLLAGIGLALSYVTAVVSIAFWFE--KKR---GLACSLGSTGTGFGTTVYAP 305 (805)
Q Consensus 258 ~R~l~G~g~g~~~~~~~~~l~~~~p--~~r---g~a~gi~~~~~~lG~~lgp~ 305 (805)
+.++.|++.|+. +.+.+=+-+.+| .+| ...+.+...+..+|=++|.+
T Consensus 54 ~GL~~GiFvG~l-a~ALaEvlnv~PIlarRi~l~~~i~~li~aialGK~~GsL 105 (110)
T PF13782_consen 54 FGLFAGIFVGCL-AAALAEVLNVFPILARRIGLRRGIPYLIMAIALGKVIGSL 105 (110)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHh
Confidence 467777777753 333344445555 222 23344444555556555544
No 316
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=34.70 E-value=16 Score=39.70 Aligned_cols=106 Identities=18% Similarity=-0.004 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHH--HHHHHHHHHHHHh----------cCcHHHHHHHHHHHHHHHHHH
Q psy10046 202 WIGSLFMAVPLLLGPVASAFVEK-FGCRSMTIVA--GIISGVGFVLSCF----------SRTIEHMYLTFGLLAGIGLAL 268 (805)
Q Consensus 202 l~~s~~~lg~~ig~l~~G~LsDr-~Grr~vlii~--~~l~~i~~i~~a~----------a~~~~~l~i~~R~l~G~g~g~ 268 (805)
....+|.++=.+|..+.++..=+ ..+|++++.+ =+++....++|.. .++-+..++ .-++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i-~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFII-LMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHH-HHHHHHHccch
Confidence 34567777878877776653211 1244444332 2233333333322 223344434 35788998888
Q ss_pred HHHHHHHHHhhhc-ccchhHHHHHHHHHhhHHHhhHHHHHH
Q psy10046 269 SYVTAVVSIAFWF-EKKRGLACSLGSTGTGFGTTVYAPITS 308 (805)
Q Consensus 269 ~~~~~~~~l~~~~-p~~rg~a~gi~~~~~~lG~~lgp~i~~ 308 (805)
.......+..+.. +++|..+-.+...+..+|-.+|..++-
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp --HHHH-----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777555 467777777777777777777766553
No 317
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.60 E-value=1.3e+02 Score=27.02 Aligned_cols=17 Identities=24% Similarity=0.423 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHhhh
Q psy10046 209 AVPLLLGPVASAFVEKF 225 (805)
Q Consensus 209 lg~~ig~l~~G~LsDr~ 225 (805)
++..+.....|+|.|+|
T Consensus 53 IsGilVGa~iG~llD~~ 69 (116)
T COG5336 53 ISGILVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 33444455568888874
No 318
>KOG3097|consensus
Probab=32.45 E-value=72 Score=34.89 Aligned_cols=109 Identities=16% Similarity=0.127 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHH
Q psy10046 659 HFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVS 738 (805)
Q Consensus 659 ~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~ 738 (805)
.++.+.+.+++.+..+..........-.+.| ....+.+ ++..+...++.+.++++ +|.|++++++.......
T Consensus 30 nv~i~s~~fl~~f~a~~gl~nlq~~vn~~lg--~~sl~~~----y~~l~~s~m~~~~~Ir~--~g~K~tm~lav~~Y~ly 101 (390)
T KOG3097|consen 30 NVLILSIAFLLTFTAYLGLQNLQTSVNYDLG--TVSLGAL----YLSLIDSSMFMPLLIRF--LGTKWTMVLAVFPYALY 101 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhcCcc--cchhhhh----hHHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHH
Confidence 4556666666666665554333222111222 1111112 22333344444477777 89999887766554333
Q ss_pred HhhhhhhhhhHHHHHHHHHHHhhhhhhhchhhhhhhhhc
Q psy10046 739 TALMPLFATNYWALLFTCLSFGIFFASNFSCTPIILVEL 777 (805)
Q Consensus 739 ~l~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~ 777 (805)
...= .-..+..++...++.|++.+..+...-.+++..
T Consensus 102 iA~N--l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~ 138 (390)
T KOG3097|consen 102 IAAN--LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPM 138 (390)
T ss_pred HHhh--cchhHHhhccHHHhhccccccccccCcceecHH
Confidence 2221 123455667778888999888887665555543
No 319
>KOG4332|consensus
Probab=30.58 E-value=7e+02 Score=26.76 Aligned_cols=57 Identities=9% Similarity=0.025 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhccc
Q psy10046 259 GLLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEYG 315 (805)
Q Consensus 259 R~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g 315 (805)
+.++.++.|..+.-+..+..-..|+.-+.-.|+....+.++.++|.-++.-+..+..
T Consensus 254 G~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~ 310 (454)
T KOG4332|consen 254 GAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSS 310 (454)
T ss_pred HHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCC
Confidence 356666666655544444444445444455566666666667777777766665443
No 320
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=30.52 E-value=3.2e+02 Score=27.36 Aligned_cols=39 Identities=13% Similarity=-0.042 Sum_probs=27.2
Q ss_pred HHHHHHHhhhheeeeecCCCCccchhHHHHHHHHHHHHHhh
Q psy10046 701 YIGVTNTVGMVALGWACDQPWLNVKKTYAACLIGCGVSTAL 741 (805)
Q Consensus 701 ~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~~~~~i~~l~ 741 (805)
...+..+++.++.-.+..| .+++..+.+..++.++..++
T Consensus 38 ~p~i~al~~g~vyml~~~K--V~K~G~~~i~~~i~gl~~~~ 76 (189)
T TIGR02185 38 SPGITAFLVGIIFFLMVAK--VPKRGVIFIFGILLGLLFFL 76 (189)
T ss_pred HHHHHHHHHhHHHhhhhhh--cCCccHHHHHHHHHHHHHHH
Confidence 3455566666666677888 88888887777777665544
No 321
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=30.48 E-value=7.7e+02 Score=27.18 Aligned_cols=23 Identities=9% Similarity=0.134 Sum_probs=16.0
Q ss_pred ccchhhHHHHHHHHHHHHHHHhh
Q psy10046 652 FSMFLELHFLLVSISTILLFTWF 674 (805)
Q Consensus 652 ~~~l~~~~~~~~~i~~~~~~~~~ 674 (805)
.+.+++|.++..+++.++.....
T Consensus 239 ~~~~~nP~~~a~~lgli~~~~~~ 261 (385)
T PF03547_consen 239 LKLFKNPPLIAIILGLIIGLIPP 261 (385)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHH
Confidence 46678888888877766655543
No 322
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=29.00 E-value=8.5e+02 Score=27.19 Aligned_cols=40 Identities=13% Similarity=0.260 Sum_probs=26.8
Q ss_pred hhcccchhHHHHHHH-HHhhHHHhhHHHHHHHHhhccchH-HHHHH
Q psy10046 279 FWFEKKRGLACSLGS-TGTGFGTTVYAPITSYLISEYGWR-GTVLL 322 (805)
Q Consensus 279 ~~~p~~rg~a~gi~~-~~~~lG~~lgp~i~~~l~~~~gWr-~~f~i 322 (805)
++.|.+|...++... ...+.|+++||+++. .+||- ...|+
T Consensus 48 DYvP~~~~vlfghhf~sIAGaGPI~GPi~aa----~~GwlPa~lWI 89 (376)
T PF02554_consen 48 DYVPTNKWVLFGHHFASIAGAGPIVGPILAA----QFGWLPALLWI 89 (376)
T ss_pred CCCCCchHHhhHHHHHHHhccccchHHHHHH----HhcchHHHHHH
Confidence 566766777777754 356778888888773 36887 44444
No 323
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=28.82 E-value=1e+03 Score=28.19 Aligned_cols=11 Identities=18% Similarity=0.353 Sum_probs=4.5
Q ss_pred HHHHHHHHHHH
Q psy10046 259 GLLAGIGLALS 269 (805)
Q Consensus 259 R~l~G~g~g~~ 269 (805)
.++.|+..+.|
T Consensus 296 G~l~~l~~~PC 306 (571)
T PRK00293 296 GAISGLICSPC 306 (571)
T ss_pred HHHHHHHhCCC
Confidence 34444443333
No 324
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=28.73 E-value=4.7e+02 Score=27.46 Aligned_cols=23 Identities=13% Similarity=0.270 Sum_probs=10.5
Q ss_pred HhhhcccchhHHHHHHHHHhhHHH
Q psy10046 277 IAFWFEKKRGLACSLGSTGTGFGT 300 (805)
Q Consensus 277 l~~~~p~~rg~a~gi~~~~~~lG~ 300 (805)
+....| +|....+++..++++|.
T Consensus 57 ~~k~lP-rk~~~~~~l~gg~~~~~ 79 (249)
T PF10225_consen 57 LSKLLP-RKSMFYAVLYGGWSFGL 79 (249)
T ss_pred HHHHcc-CcchhHHHHhhhhHHHH
Confidence 446677 33333334444444443
No 325
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=28.73 E-value=4.4e+02 Score=23.83 Aligned_cols=10 Identities=30% Similarity=0.404 Sum_probs=4.9
Q ss_pred hhHHHHHHHH
Q psy10046 285 RGLACSLGST 294 (805)
Q Consensus 285 rg~a~gi~~~ 294 (805)
.+.+.++|..
T Consensus 56 l~iAYavw~G 65 (110)
T PRK09541 56 TGIAYAIWSG 65 (110)
T ss_pred chhHHHHHHH
Confidence 4455555543
No 326
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=28.28 E-value=3.2e+02 Score=29.28 Aligned_cols=80 Identities=18% Similarity=0.168 Sum_probs=45.2
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCC-ChhhHHHHHHHHHHHHHhhhheeeeecCCCCccchhHHHHHH
Q psy10046 654 MFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGL-SKEEATSILSYIGVTNTVGMVALGWACDQPWLNVKKTYAACL 732 (805)
Q Consensus 654 ~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~-s~~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~~~~~~ 732 (805)
+.|+|+.+..+..........+..+.|.| +.|. =+..-||...+. +.-.+|++ ++-|| .+|.....+.+
T Consensus 65 ~~~~p~~~~~~~l~a~li~~nW~lfiWAv----n~g~~leaSLGY~InPL-~~VllG~l---flkEr--ls~~Q~iAV~l 134 (293)
T COG2962 65 LLKQPKTLLMLALTALLIGLNWWLFIWAV----NNGHVLEASLGYFINPL-VNVLLGRL---FLKER--LSRLQWIAVGL 134 (293)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHhheec----CCCchhHHHhHHHHHHH-HHHHHHHH---HHHhh--ccHHHHHHHHH
Confidence 67888777666655555455544444433 2222 122223333321 22233443 45677 88888888888
Q ss_pred HHHHHHHhhhh
Q psy10046 733 IGCGVSTALMP 743 (805)
Q Consensus 733 ~~~~i~~l~~~ 743 (805)
..+|+....+.
T Consensus 135 A~~GV~~~~~~ 145 (293)
T COG2962 135 AAAGVLIQTWL 145 (293)
T ss_pred HHHHHHHHHHH
Confidence 88888877654
No 327
>KOG1479|consensus
Probab=27.91 E-value=3e+02 Score=31.05 Aligned_cols=106 Identities=13% Similarity=-0.018 Sum_probs=54.5
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhCChHHHHHHH--HHHHHHHHHHH------hcCcHHHHHHHHHHHHHHHHHHHH
Q psy10046 200 TAWIGSL-FMAVPLLLGPVASAFVEKFGCRSMTIVAG--IISGVGFVLSC------FSRTIEHMYLTFGLLAGIGLALSY 270 (805)
Q Consensus 200 ~~l~~s~-~~lg~~ig~l~~G~LsDr~Grr~vlii~~--~l~~i~~i~~a------~a~~~~~l~i~~R~l~G~g~g~~~ 270 (805)
.-++..+ |.+.-.+|.+.+.++-..= ||...+..+ +++.-...+|- +-.+-+++++ +-++.|+..|-..
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~-l~~~lglsnGYlt 361 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIF-LMSLLGLSNGYLT 361 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHH-HHHHHHhccchHh
Confidence 3344555 7777777755555543332 333322222 12222222221 1234444434 4688899888777
Q ss_pred HHHHHHHhhhcc-cchhHHHHHHHHHhhHHHhhHHHHH
Q psy10046 271 VTAVVSIAFWFE-KKRGLACSLGSTGTGFGTTVYAPIT 307 (805)
Q Consensus 271 ~~~~~~l~~~~p-~~rg~a~gi~~~~~~lG~~lgp~i~ 307 (805)
.....+..+-.+ +++-.+-.+...+...|.++|..++
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 666666665554 5555555555555555655555543
No 328
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=27.39 E-value=9.2e+02 Score=27.08 Aligned_cols=51 Identities=16% Similarity=0.095 Sum_probs=35.3
Q ss_pred HHHHH-HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q psy10046 187 IEFLN-EFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGII 237 (805)
Q Consensus 187 p~i~~-~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l 237 (805)
|.+.. .+|++..+...+.+...++.+++.++-..-.-.+|.|..++.+...
T Consensus 16 p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~ 67 (406)
T TIGR03173 16 PLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSF 67 (406)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcH
Confidence 44443 4699998888888888888888888875333357777665555443
No 329
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=26.97 E-value=1.5e+03 Score=30.52 Aligned_cols=19 Identities=11% Similarity=-0.204 Sum_probs=11.0
Q ss_pred cchHHHHHHHHHHHHHHHH
Q psy10046 314 YGWRGTVLLLSGTFFNLCV 332 (805)
Q Consensus 314 ~gWr~~f~i~~~~~~~~~i 332 (805)
.+|+.++.+++++.+++++
T Consensus 195 ~sw~Lalv~l~~~pl~~~~ 213 (1466)
T PTZ00265 195 KNARLTLCITCVFPLIYIC 213 (1466)
T ss_pred HhHHHHHHHHHHHHHHHHH
Confidence 4788877665554443333
No 330
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=26.52 E-value=3.1e+02 Score=24.49 Aligned_cols=22 Identities=27% Similarity=0.182 Sum_probs=17.9
Q ss_pred ccchhHHHHHHHHHHHHHhhhh
Q psy10046 722 LNVKKTYAACLIGCGVSTALMP 743 (805)
Q Consensus 722 ~gr~~~~~~~~~~~~i~~l~~~ 743 (805)
..++++..+.++..|+.++...
T Consensus 86 ~~~~~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 86 LSPRRWLAILLILIGVILIAWS 107 (113)
T ss_pred CCHHHHHHHHHHHHHHHHHhhh
Confidence 8888888888888888877654
No 331
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=26.08 E-value=1.1e+02 Score=29.65 Aligned_cols=35 Identities=14% Similarity=0.103 Sum_probs=27.3
Q ss_pred hhchhhhhhhhhccCccchhhhhHHHHHHHhhhhc
Q psy10046 765 SNFSCTPIILVELVPLDRFATAYGLTLLAQGIGNL 799 (805)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~a~gl~~~~~~ig~~ 799 (805)
+..++.|.+++....+++-|..+|+-.+-.+++.+
T Consensus 110 gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 110 GLLGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 34557777888888899899999998887777654
No 332
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=24.57 E-value=9e+02 Score=26.02 Aligned_cols=13 Identities=8% Similarity=-0.079 Sum_probs=7.8
Q ss_pred ccchhHHHHHHHH
Q psy10046 282 EKKRGLACSLGST 294 (805)
Q Consensus 282 p~~rg~a~gi~~~ 294 (805)
+.+|...+++...
T Consensus 214 ~~~R~~lLg~~vg 226 (299)
T PF05884_consen 214 GTNRQKLLGIVVG 226 (299)
T ss_pred CcchHHHHHHHHH
Confidence 5567766655543
No 333
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase. Members of this protein family have a novel N-terminal domain, a single predicted membrane-spanning helix, and a predicted cystosolic histidine kinase domain. We designate this protein PrsK, and its companion DNA-binding response regulator protein (TIGR02915) PrsR. These predicted signal-transducing proteins appear to enable enhancer-dependent transcriptional activation. The prsK gene is often associated with exopolysaccharide biosynthesis genes.
Probab=24.51 E-value=1.3e+03 Score=27.85 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=19.5
Q ss_pred hhHHHHHHHHHhhHHHhhHHHHHHHHhhccc--hHHH
Q psy10046 285 RGLACSLGSTGTGFGTTVYAPITSYLISEYG--WRGT 319 (805)
Q Consensus 285 rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~g--Wr~~ 319 (805)
|..+..........+..++-.+.|.+...+| |.-.
T Consensus 226 r~~~~~~~~~~~~g~yl~~~~~~~~~~~~~gg~~~~~ 262 (679)
T TIGR02916 226 REMAFHSATLLGAGLYLLAMAGAGYYLRYFGGEWGDA 262 (679)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHH
Confidence 6655555555444444555556666776665 5433
No 334
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=24.50 E-value=7.2e+02 Score=30.74 Aligned_cols=41 Identities=10% Similarity=-0.048 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhHHH
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFEKKRGLACSLGSTGTGFGT 300 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p~~rg~a~gi~~~~~~lG~ 300 (805)
+..|.+.|....++..++.......-...+|++..+..+++
T Consensus 191 ~~gG~~~Gaa~Gv~~Gli~~l~~~~~~~~~~~~af~GLlaG 231 (764)
T TIGR02865 191 YIGGSGAGAAGGVVIGVILGLANNANLYQIGVFGFAGLLGG 231 (764)
T ss_pred HhcCchHhHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 44555555554444444444333334455666655444443
No 335
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=23.98 E-value=7.3e+02 Score=24.79 Aligned_cols=23 Identities=9% Similarity=-0.128 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc
Q psy10046 260 LLAGIGLALSYVTAVVSIAFWFE 282 (805)
Q Consensus 260 ~l~G~g~g~~~~~~~~~l~~~~p 282 (805)
++.|+.+|..+-..+.++..+..
T Consensus 131 ll~a~vgGfamy~my~y~yr~~a 153 (226)
T COG4858 131 LLTAVVGGFAMYIMYYYAYRMRA 153 (226)
T ss_pred HHHHHhhhHHHHHHHHHHHHhhc
Confidence 67788888777777777775543
No 336
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=23.80 E-value=2.5e+02 Score=32.99 Aligned_cols=45 Identities=13% Similarity=0.257 Sum_probs=30.7
Q ss_pred hhcccchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc---chHHHHHHH
Q psy10046 279 FWFEKKRGLACSLGSTGTGFGTTVYAPITSYLISEY---GWRGTVLLL 323 (805)
Q Consensus 279 ~~~p~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~---gWr~~f~i~ 323 (805)
...|.+||..+......+.+++.++..+++.+...+ .|+....+.
T Consensus 289 ~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~~~~~lt 336 (521)
T PF02990_consen 289 FLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGKKWKKNSILT 336 (521)
T ss_pred hccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCceeehhhHH
Confidence 344677888888777777777778777777776544 376544433
No 337
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=23.75 E-value=1.4e+03 Score=27.98 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=16.0
Q ss_pred HHHHHHhhccchHHHHHHHHHHHHHHHHHHHh
Q psy10046 305 PITSYLISEYGWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 305 ~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
++...++-.++|..++...+.+.+.+++..++
T Consensus 282 ~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~ 313 (709)
T COG2274 282 LIFLAVMFLYSWKLTLIVLAAIPLNVLITLIF 313 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444567776666555544444443333
No 338
>KOG3810|consensus
Probab=23.56 E-value=4.7e+02 Score=29.18 Aligned_cols=93 Identities=12% Similarity=0.087 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCChH--HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10046 201 AWIGSLFMAVPLLLGPVASAFVEKFGCRS--MTIVAGIISGVGFVLSCFSRTIEHMYLTFGLLAGIGLALSYVTAVVSIA 278 (805)
Q Consensus 201 ~l~~s~~~lg~~ig~l~~G~LsDr~Grr~--vlii~~~l~~i~~i~~a~a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~ 278 (805)
|..-++..+..+++.+..|.+--.+-|.. .+.++.+.-+...++++..+++|..++.+ ++.+.-.....+++..-++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~y-vlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGY-VLFRVIYQLTITIATFQIA 352 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhH-HHHHhhHhhhhhHHHHHHH
Confidence 34555666777888888898876665543 44444555555566677888988887754 5555555555666666666
Q ss_pred h-hcccchhHHHHHHHH
Q psy10046 279 F-WFEKKRGLACSLGST 294 (805)
Q Consensus 279 ~-~~p~~rg~a~gi~~~ 294 (805)
. ...+.-|..+|+-..
T Consensus 353 ~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTF 369 (433)
T ss_pred HhhhhhhheeeeehHHH
Confidence 4 334556776666554
No 339
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=23.55 E-value=1.2e+02 Score=27.49 Aligned_cols=21 Identities=29% Similarity=0.387 Sum_probs=10.7
Q ss_pred ccchhHHHHHHHHHHHHHhhh
Q psy10046 722 LNVKKTYAACLIGCGVSTALM 742 (805)
Q Consensus 722 ~gr~~~~~~~~~~~~i~~l~~ 742 (805)
+++.+.+...++..++..+..
T Consensus 8 iN~~R~~al~lif~g~~vmy~ 28 (114)
T PF11023_consen 8 INKIRTFALSLIFIGMIVMYI 28 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 455555555555555444433
No 340
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=23.45 E-value=5e+02 Score=27.77 Aligned_cols=25 Identities=12% Similarity=0.355 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccc
Q psy10046 258 FGLLAGIGLALSYVTAVVSIAFWFEK 283 (805)
Q Consensus 258 ~R~l~G~g~g~~~~~~~~~l~~~~p~ 283 (805)
.|.+.|+-.- .+..+++++.-.||+
T Consensus 25 lr~~~g~~~v-lf~PGy~l~~~lfp~ 49 (287)
T PF07760_consen 25 LRVILGFPFV-LFLPGYALVAALFPR 49 (287)
T ss_pred HHHHHHHHHH-HHhccHHHHHHHccC
Confidence 4888887653 456778888888884
No 341
>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=22.54 E-value=4.6e+02 Score=26.28 Aligned_cols=18 Identities=11% Similarity=0.204 Sum_probs=11.2
Q ss_pred HHHHHH-HHHHHHHhCCCh
Q psy10046 180 FSFGLL-YIEFLNEFGASK 197 (805)
Q Consensus 180 ~~~~~~-~p~i~~~~g~s~ 197 (805)
.+++++ +|.+...+|...
T Consensus 23 gaIGLlRfPD~YtRLHAAT 41 (197)
T PRK12585 23 AAIGVIRLPDVYTRTHAAG 41 (197)
T ss_pred HHHHHHhcCcHHHHhhccc
Confidence 345544 677777777643
No 342
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=22.53 E-value=1e+03 Score=25.84 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH-HHh-cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchh
Q psy10046 210 VPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVL-SCF-SRTIEHMYLTFGLLAGIGLALSYVTAVVSIAFWFE-KKRG 286 (805)
Q Consensus 210 g~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~-~a~-a~~~~~l~i~~R~l~G~g~g~~~~~~~~~l~~~~p-~~rg 286 (805)
.-.+..-+++.++||-|.-.+-+=|+.+++..+.. .++ ..+.|. .++.|...|.......++++.... ++--
T Consensus 19 tPLllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~t~spw~-----gl~~a~l~g~l~~ll~a~~ti~l~~nqii 93 (304)
T COG1079 19 TPLLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYGTGSPWL-----GLLAAALVGALFGLLHAFLTIKLRANQII 93 (304)
T ss_pred HHHHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHccccHHH-----HHHHHHHHHHHHHHHHHHHHHhhccccch
Confidence 33444556778899988755444443333333221 122 233332 234455566666666777775554 5544
Q ss_pred HHHHHHHHHhhHHHhhHHHHHH
Q psy10046 287 LACSLGSTGTGFGTTVYAPITS 308 (805)
Q Consensus 287 ~a~gi~~~~~~lG~~lgp~i~~ 308 (805)
..+++.-.+.++...++..+.+
T Consensus 94 sG~alnl~a~Glt~fl~~~~~~ 115 (304)
T COG1079 94 SGLALNLLASGLTAFLGQSIFG 115 (304)
T ss_pred hHHHHHHHHHHHHHHHHHHHhc
Confidence 4455555555555555544443
No 343
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=22.21 E-value=6e+02 Score=23.09 Aligned_cols=46 Identities=11% Similarity=-0.018 Sum_probs=29.1
Q ss_pred HHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhc
Q psy10046 292 GSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAIM 337 (805)
Q Consensus 292 ~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~~ 337 (805)
......++..+|..+++.-....||-|-...-.+..++..++.++.
T Consensus 43 ~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~Gl~y~~il~lis~~~ 88 (116)
T PF12670_consen 43 VVIIYILSVFIGGFYAGRKAGSKGWLHGLLVGLLYFLILLLISFLF 88 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556667777777777777888887666555555554554444
No 344
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=21.81 E-value=3.8e+02 Score=20.65 Aligned_cols=35 Identities=26% Similarity=0.549 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHh-hhCChHHHHHHHHHHHH
Q psy10046 206 LFMAVPLLLGPVASAFVE-KFGCRSMTIVAGIISGV 240 (805)
Q Consensus 206 ~~~lg~~ig~l~~G~LsD-r~Grr~vlii~~~l~~i 240 (805)
...++..+.....|+..| ++|.++.+++..++.++
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 344455555666677777 46765655544444333
No 345
>PLN03140 ABC transporter G family member; Provisional
Probab=21.80 E-value=1.7e+03 Score=29.89 Aligned_cols=27 Identities=4% Similarity=0.062 Sum_probs=15.8
Q ss_pred HHHHHHHhhc----cchHHHHHHHHHHHHHH
Q psy10046 304 APITSYLISE----YGWRGTVLLLSGTFFNL 330 (805)
Q Consensus 304 p~i~~~l~~~----~gWr~~f~i~~~~~~~~ 330 (805)
-+++|+++.. .-|+|.+|+.-+.-..-
T Consensus 692 ~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~e 722 (1470)
T PLN03140 692 FLLGGFILPKGEIPNWWEWAYWVSPLSYGFN 722 (1470)
T ss_pred HHHccceechHhCchHHHHHHHhCHHHHHHH
Confidence 3455665542 34899988866544333
No 346
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.77 E-value=2.9e+02 Score=24.93 Aligned_cols=32 Identities=9% Similarity=0.189 Sum_probs=21.1
Q ss_pred cchhHHHHHHHHHhhHHHhhHHHHHHHHhhcc
Q psy10046 283 KKRGLACSLGSTGTGFGTTVYAPITSYLISEY 314 (805)
Q Consensus 283 ~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~ 314 (805)
+.++.+.++--..-.+++++-....||+.+++
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34777777766666666666666667777754
No 347
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=21.75 E-value=2.4e+02 Score=28.17 Aligned_cols=24 Identities=8% Similarity=0.034 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCC
Q psy10046 204 GSLFMAVPLLLGPVASAFVEKFGC 227 (805)
Q Consensus 204 ~s~~~lg~~ig~l~~G~LsDr~Gr 227 (805)
..-|.+++.+++.+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 456788899999999999998875
No 348
>PRK02237 hypothetical protein; Provisional
Probab=21.55 E-value=1.4e+02 Score=26.84 Aligned_cols=85 Identities=11% Similarity=0.048 Sum_probs=0.0
Q ss_pred hccccchhhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhcCCCh-hhHHHHHHHHHHHHHhhhheeeeecCCCCccchhH
Q psy10046 649 MFDFSMFLELHFLLVSISTILLFTWFVIPYFYLTDFVTNQGLSK-EEATSILSYIGVTNTVGMVALGWACDQPWLNVKKT 727 (805)
Q Consensus 649 ~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~G~s~-~~a~~~~~~~~i~~~ig~l~~g~l~dr~~~gr~~~ 727 (805)
+.....+|.-+-.+..+........+....+. .+ ..++-.+..++...++.+++++|..|..+-.+.-+
T Consensus 21 yl~w~wlR~~ks~~~~~pg~~~L~lfg~llTl----------~p~~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~ 90 (109)
T PRK02237 21 YLPWLWLREGKSAWWLLPGALSLALFGWLLTL----------QPDAAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDW 90 (109)
T ss_pred HHHHHHHHcCCchhHHHHHHHHHHHHHHHHhc----------CCchhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHH
Q ss_pred HHHHHHHHHHHHhhhh
Q psy10046 728 YAACLIGCGVSTALMP 743 (805)
Q Consensus 728 ~~~~~~~~~i~~l~~~ 743 (805)
......+.+++++++.
T Consensus 91 iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 91 IGAAICLVGMAVIMYA 106 (109)
T ss_pred HhHHHHHHhHHHheec
No 349
>PLN03140 ABC transporter G family member; Provisional
Probab=21.44 E-value=9.3e+02 Score=32.36 Aligned_cols=28 Identities=7% Similarity=0.108 Sum_probs=15.9
Q ss_pred HHHHHHhhc----cchHHHHHHHHHHHHHHHH
Q psy10046 305 PITSYLISE----YGWRGTVLLLSGTFFNLCV 332 (805)
Q Consensus 305 ~i~~~l~~~----~gWr~~f~i~~~~~~~~~i 332 (805)
+++|+++.. ..|+|.+|+.-.--.+-.+
T Consensus 1371 lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l 1402 (1470)
T PLN03140 1371 LFSGFFIPRPKIPKWWVWYYWICPVAWTVYGL 1402 (1470)
T ss_pred HHeeeccChHHCchHHHHHHHcCHHHHHHhhh
Confidence 344555432 3589999886654444333
No 350
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=21.30 E-value=2.9e+02 Score=34.52 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=29.1
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHH
Q psy10046 186 YIEFLNEFGASKSKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIV 233 (805)
Q Consensus 186 ~p~i~~~~g~s~~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii 233 (805)
...+...+|++....|+ ++..+|..+.-++...++-|-|.-.+.+.
T Consensus 956 at~IG~vlGIse~VmGl--TfLA~GTSIPDlisSvivArkG~gdMAVa 1001 (1096)
T TIGR00927 956 AHQVGETIGISEEIMGL--TILAAGTSIPDLITSVIVARKGLGDMAVS 1001 (1096)
T ss_pred HHHhhhhcCCChhhhhh--hhhhhhcccHHHHHHHHHHHccCCcceee
Confidence 34556677888776654 34444777777777777777675544333
No 351
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=20.86 E-value=3.6e+02 Score=27.20 Aligned_cols=30 Identities=23% Similarity=0.181 Sum_probs=21.8
Q ss_pred cchhHHHHHHHHHhhHHHhhHHHHHHHHhh
Q psy10046 283 KKRGLACSLGSTGTGFGTTVYAPITSYLIS 312 (805)
Q Consensus 283 ~~rg~a~gi~~~~~~lG~~lgp~i~~~l~~ 312 (805)
++.+++.++-..+..+|.++|..+..++..
T Consensus 137 ~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 137 RKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 446777777777777888888887777644
No 352
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=20.35 E-value=1.8e+02 Score=26.21 Aligned_cols=50 Identities=12% Similarity=0.096 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q psy10046 198 SKTAWIGSLFMAVPLLLGPVASAFVEKFGCRSMTIVAGIISGVGFVLSCF 247 (805)
Q Consensus 198 ~~~~l~~s~~~lg~~ig~l~~G~LsDr~Grr~vlii~~~l~~i~~i~~a~ 247 (805)
...|-+.+.|.-.+.+.+++|++..|+.-+.+.=.++..+..++..+..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 56778889999999999999999999988877777777666666655443
No 353
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=20.31 E-value=2.3e+02 Score=29.15 Aligned_cols=50 Identities=12% Similarity=-0.052 Sum_probs=28.1
Q ss_pred chhHHHHHHHHHhhHHHhhHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHh
Q psy10046 284 KRGLACSLGSTGTGFGTTVYAPITSYLISEYGWRGTVLLLSGTFFNLCVCGAI 336 (805)
Q Consensus 284 ~rg~a~gi~~~~~~lG~~lgp~i~~~l~~~~gWr~~f~i~~~~~~~~~i~~~~ 336 (805)
+.-..+.++.++..++.++..++.|++.. +.|.+.+.+++..+.+.+++|
T Consensus 22 k~dp~l~~~ml~a~l~~~~v~v~ig~l~~---~~~~~~i~gi~~g~l~am~vl 71 (224)
T PF13829_consen 22 KEDPKLPWLMLGAFLGPIAVFVLIGLLFG---SWWYWLIIGILLGLLAAMIVL 71 (224)
T ss_pred HHCcchHHHHHHHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHH
Confidence 33444566666666666666666666654 445555666554444444443
No 354
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=20.16 E-value=4.3e+02 Score=30.13 Aligned_cols=13 Identities=8% Similarity=-0.110 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHHh
Q psy10046 324 SGTFFNLCVCGAI 336 (805)
Q Consensus 324 ~~~~~~~~i~~~~ 336 (805)
+++.++.++...+
T Consensus 11 ~~L~LlLlIPl~~ 23 (430)
T PF06123_consen 11 GFLILLLLIPLSM 23 (430)
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444333
No 355
>PRK02935 hypothetical protein; Provisional
Probab=20.16 E-value=1.6e+02 Score=26.38 Aligned_cols=22 Identities=23% Similarity=0.313 Sum_probs=12.5
Q ss_pred ccchhHHHHHHHHHHHHHhhhh
Q psy10046 722 LNVKKTYAACLIGCGVSTALMP 743 (805)
Q Consensus 722 ~gr~~~~~~~~~~~~i~~l~~~ 743 (805)
++|.+.+..+++..++.++.+.
T Consensus 9 INkiRt~aL~lvfiG~~vMy~G 30 (110)
T PRK02935 9 INKIRTFALSLVFIGFIVMYLG 30 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5666666666655555544443
Done!