BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10055
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P35381|ATPA_DROME ATP synthase subunit alpha, mitochondrial OS=Drosophila
melanogaster GN=blw PE=1 SV=2
Length = 552
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/25 (100%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKTALAIDTIINQKR
Sbjct: 206 RELIIGDRQTGKTALAIDTIINQKR 230
>sp|Q9XXK1|ATPA_CAEEL ATP synthase subunit alpha, mitochondrial OS=Caenorhabditis elegans
GN=H28O16.1 PE=1 SV=1
Length = 538
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKTA+AIDTIINQKR
Sbjct: 192 RELIIGDRQTGKTAIAIDTIINQKR 216
>sp|A0LDA2|ATPA_MAGSM ATP synthase subunit alpha OS=Magnetococcus sp. (strain MC-1)
GN=atpA PE=3 SV=1
Length = 507
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKTA+AIDTIINQKR
Sbjct: 164 RELIIGDRQTGKTAVAIDTIINQKR 188
>sp|O51874|ATPA_BUCAP ATP synthase subunit alpha OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=atpA PE=3 SV=2
Length = 510
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKTALAIDTIINQK+
Sbjct: 164 RELIIGDRQTGKTALAIDTIINQKK 188
>sp|B8D6S5|ATPA_BUCAT ATP synthase subunit alpha OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain Tuc7) GN=atpA PE=3 SV=1
Length = 512
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKTALAIDTIINQK+
Sbjct: 164 RELIIGDRQTGKTALAIDTIINQKQ 188
>sp|P57122|ATPA_BUCAI ATP synthase subunit alpha OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=atpA PE=3 SV=1
Length = 512
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKTALAIDTIINQK+
Sbjct: 164 RELIIGDRQTGKTALAIDTIINQKQ 188
>sp|B8D8H1|ATPA_BUCA5 ATP synthase subunit alpha OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain 5A) GN=atpA PE=3 SV=1
Length = 512
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKTALAIDTIINQK+
Sbjct: 164 RELIIGDRQTGKTALAIDTIINQKQ 188
>sp|P08428|ATPA_XENLA ATP synthase subunit alpha, mitochondrial OS=Xenopus laevis
GN=atp5a PE=2 SV=1
Length = 545
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/25 (92%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKT++AIDTIINQKR
Sbjct: 208 RELIIGDRQTGKTSIAIDTIINQKR 232
>sp|P15999|ATPA_RAT ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus
GN=Atp5a1 PE=1 SV=2
Length = 553
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/25 (92%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKT++AIDTIINQKR
Sbjct: 207 RELIIGDRQTGKTSIAIDTIINQKR 231
>sp|Q5R546|ATPA_PONAB ATP synthase subunit alpha, mitochondrial OS=Pongo abelii GN=ATP5A1
PE=2 SV=1
Length = 553
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/25 (92%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKT++AIDTIINQKR
Sbjct: 207 RELIIGDRQTGKTSIAIDTIINQKR 231
>sp|A5A6H5|ATPA_PANTR ATP synthase subunit alpha, mitochondrial OS=Pan troglodytes
GN=ATP5A1 PE=2 SV=1
Length = 553
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/25 (92%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKT++AIDTIINQKR
Sbjct: 207 RELIIGDRQTGKTSIAIDTIINQKR 231
>sp|Q03265|ATPA_MOUSE ATP synthase subunit alpha, mitochondrial OS=Mus musculus GN=Atp5a1
PE=1 SV=1
Length = 553
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/25 (92%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKT++AIDTIINQKR
Sbjct: 207 RELIIGDRQTGKTSIAIDTIINQKR 231
>sp|P25705|ATPA_HUMAN ATP synthase subunit alpha, mitochondrial OS=Homo sapiens GN=ATP5A1
PE=1 SV=1
Length = 553
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/25 (92%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKT++AIDTIINQKR
Sbjct: 207 RELIIGDRQTGKTSIAIDTIINQKR 231
>sp|P19483|ATPA_BOVIN ATP synthase subunit alpha, mitochondrial OS=Bos taurus GN=ATP5A1
PE=1 SV=1
Length = 553
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/25 (92%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKT++AIDTIINQKR
Sbjct: 207 RELIIGDRQTGKTSIAIDTIINQKR 231
>sp|A1A3C7|ATPA_BIFAA ATP synthase subunit alpha OS=Bifidobacterium adolescentis (strain
ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) GN=atpA
PE=3 SV=1
Length = 542
Score = 52.0 bits (123), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/25 (92%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
R+LIIGDRQTGKTA+AIDTIINQKR
Sbjct: 168 RQLIIGDRQTGKTAIAIDTIINQKR 192
>sp|A6VL59|ATPA_ACTSZ ATP synthase subunit alpha OS=Actinobacillus succinogenes (strain
ATCC 55618 / 130Z) GN=atpA PE=3 SV=1
Length = 513
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/24 (100%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTALAIDTIINQK
Sbjct: 164 RELIIGDRQTGKTALAIDTIINQK 187
>sp|P50000|ATPA_ACEWD ATP synthase subunit alpha, sodium ion specific OS=Acetobacterium
woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC
1655) GN=atpA PE=3 SV=3
Length = 502
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/24 (100%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTALAIDTIINQK
Sbjct: 164 RELIIGDRQTGKTALAIDTIINQK 187
>sp|A8GY42|ATPA_RICB8 ATP synthase subunit alpha OS=Rickettsia bellii (strain OSU 85-389)
GN=atpA PE=3 SV=1
Length = 512
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/25 (92%), Positives = 25/25 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKTA+AIDTIINQK+
Sbjct: 164 RELIIGDRQTGKTAIAIDTIINQKK 188
>sp|A8MJW1|ATPA_ALKOO ATP synthase subunit alpha OS=Alkaliphilus oremlandii (strain
OhILAs) GN=atpA PE=3 SV=1
Length = 505
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/24 (100%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTALAIDTIINQK
Sbjct: 164 RELIIGDRQTGKTALAIDTIINQK 187
>sp|A8Z5R1|ATPA_SULMW ATP synthase subunit alpha OS=Sulcia muelleri (strain GWSS) GN=atpA
PE=3 SV=1
Length = 526
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/25 (92%), Positives = 24/25 (96%)
Query: 100 RELIIGDRQTGKTALAIDTIINQKR 124
RELIIGDRQTGKT LAIDTIINQK+
Sbjct: 166 RELIIGDRQTGKTTLAIDTIINQKK 190
>sp|Q8RGE0|ATPA_FUSNN ATP synthase subunit alpha OS=Fusobacterium nucleatum subsp.
nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 /
LMG 13131) GN=atpA PE=3 SV=1
Length = 500
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 27/33 (81%), Gaps = 3/33 (9%)
Query: 94 GMDP---PSRELIIGDRQTGKTALAIDTIINQK 123
GM P RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 155 GMVPIGRGQRELIIGDRQTGKTAIAIDTIINQK 187
>sp|Q112Z6|ATPA_TRIEI ATP synthase subunit alpha OS=Trichodesmium erythraeum (strain
IMS101) GN=atpA PE=3 SV=1
Length = 505
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|B1LBC1|ATPA_THESQ ATP synthase subunit alpha OS=Thermotoga sp. (strain RQ2) GN=atpA
PE=3 SV=1
Length = 503
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|B9L1H1|ATPA_THERP ATP synthase subunit alpha OS=Thermomicrobium roseum (strain ATCC
27502 / DSM 5159 / P-2) GN=atpA PE=3 SV=1
Length = 510
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 164 RELIIGDRQTGKTAIAIDTIINQK 187
>sp|A5ILX0|ATPA_THEP1 ATP synthase subunit alpha OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=atpA PE=3 SV=1
Length = 503
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|B9K7T9|ATPA_THENN ATP synthase subunit alpha OS=Thermotoga neapolitana (strain ATCC
49049 / DSM 4359 / NS-E) GN=atpA PE=3 SV=1
Length = 503
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|Q9X1U7|ATPA_THEMA ATP synthase subunit alpha OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=atpA PE=1 SV=1
Length = 503
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|A6LJR3|ATPA_THEM4 ATP synthase subunit alpha OS=Thermosipho melanesiensis (strain
BI429 / DSM 12029) GN=atpA PE=3 SV=1
Length = 507
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|A8F3K0|ATPA_THELT ATP synthase subunit alpha OS=Thermotoga lettingae (strain ATCC
BAA-301 / DSM 14385 / TMO) GN=atpA PE=3 SV=1
Length = 503
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|B7IG42|ATPA_THEAB ATP synthase subunit alpha OS=Thermosipho africanus (strain TCF52B)
GN=atpA PE=3 SV=1
Length = 507
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|A5GV72|ATPA_SYNR3 ATP synthase subunit alpha OS=Synechococcus sp. (strain RCC307)
GN=atpA PE=3 SV=1
Length = 505
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|Q46J57|ATPA_PROMT ATP synthase subunit alpha OS=Prochlorococcus marinus (strain
NATL2A) GN=atpA PE=3 SV=1
Length = 504
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|Q7V037|ATPA_PROMP ATP synthase subunit alpha OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=atpA PE=3 SV=1
Length = 505
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|Q7V5S7|ATPA_PROMM ATP synthase subunit alpha OS=Prochlorococcus marinus (strain MIT
9313) GN=atpA PE=3 SV=1
Length = 505
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|Q7VA63|ATPA_PROMA ATP synthase subunit alpha OS=Prochlorococcus marinus (strain SARG
/ CCMP1375 / SS120) GN=atpA PE=3 SV=1
Length = 505
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|A2BYH6|ATPA_PROM5 ATP synthase subunit alpha OS=Prochlorococcus marinus (strain MIT
9515) GN=atpA PE=3 SV=1
Length = 505
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|A9BCD9|ATPA_PROM4 ATP synthase subunit alpha OS=Prochlorococcus marinus (strain MIT
9211) GN=atpA PE=3 SV=1
Length = 504
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|A2C6X5|ATPA_PROM3 ATP synthase subunit alpha OS=Prochlorococcus marinus (strain MIT
9303) GN=atpA PE=3 SV=1
Length = 505
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|A2C4J5|ATPA_PROM1 ATP synthase subunit alpha OS=Prochlorococcus marinus (strain
NATL1A) GN=atpA PE=3 SV=1
Length = 504
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|P12405|ATPA_NOSS1 ATP synthase subunit alpha OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=atpA PE=3 SV=2
Length = 506
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 166 RELIIGDRQTGKTAIAIDTIINQK 189
>sp|B2J058|ATPA_NOSP7 ATP synthase subunit alpha OS=Nostoc punctiforme (strain ATCC 29133
/ PCC 73102) GN=atpA PE=3 SV=1
Length = 506
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 166 RELIIGDRQTGKTAIAIDTIINQK 189
>sp|Q4A602|ATPA_MYCS5 ATP synthase subunit alpha OS=Mycoplasma synoviae (strain 53)
GN=atpA PE=3 SV=1
Length = 530
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 164 RELIIGDRQTGKTAIAIDTIINQK 187
>sp|C5CIV6|ATPA_KOSOT ATP synthase subunit alpha OS=Kosmotoga olearia (strain TBF 19.5.1)
GN=atpA PE=3 SV=1
Length = 502
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 164 RELIIGDRQTGKTAIAIDTIINQK 187
>sp|A7HJV9|ATPA_FERNB ATP synthase subunit alpha OS=Fervidobacterium nodosum (strain ATCC
35602 / DSM 5306 / Rt17-B1) GN=atpA PE=3 SV=1
Length = 507
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 165 RELIIGDRQTGKTAIAIDTIINQK 188
>sp|Q83AF7|ATPA_COXBU ATP synthase subunit alpha OS=Coxiella burnetii (strain RSA 493 /
Nine Mile phase I) GN=atpA PE=1 SV=1
Length = 515
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 166 RELIIGDRQTGKTAIAIDTIINQK 189
>sp|A9NBC8|ATPA_COXBR ATP synthase subunit alpha OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=atpA PE=3 SV=1
Length = 515
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 166 RELIIGDRQTGKTAIAIDTIINQK 189
>sp|A9KBF9|ATPA_COXBN ATP synthase subunit alpha OS=Coxiella burnetii (strain Dugway
5J108-111) GN=atpA PE=3 SV=1
Length = 515
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 166 RELIIGDRQTGKTAIAIDTIINQK 189
>sp|B6J2D8|ATPA_COXB2 ATP synthase subunit alpha OS=Coxiella burnetii (strain CbuG_Q212)
GN=atpA PE=3 SV=1
Length = 515
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 166 RELIIGDRQTGKTAIAIDTIINQK 189
>sp|B6J961|ATPA_COXB1 ATP synthase subunit alpha OS=Coxiella burnetii (strain CbuK_Q154)
GN=atpA PE=3 SV=1
Length = 515
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 166 RELIIGDRQTGKTAIAIDTIINQK 189
>sp|Q3A944|ATPA_CARHZ ATP synthase subunit alpha OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=atpA PE=3 SV=1
Length = 501
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 24/24 (100%)
Query: 100 RELIIGDRQTGKTALAIDTIINQK 123
RELIIGDRQTGKTA+AIDTIINQK
Sbjct: 164 RELIIGDRQTGKTAIAIDTIINQK 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,837,142
Number of Sequences: 539616
Number of extensions: 1753470
Number of successful extensions: 6805
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 4826
Number of HSP's gapped (non-prelim): 2133
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)