BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10057
(99 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332021152|gb|EGI61537.1| Splicing factor 3 subunit 1 [Acromyrmex echinatior]
Length = 768
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
+G KHPA +P L+EEP KK+R+E+SLIPEQ FL++ P V N+ VP MT+K EWKLN
Sbjct: 641 IGLKHPASKP-LEEEPQAKKLRTEDSLIPEQQFLARNKDP-VQINIAVPMMTEKAEWKLN 698
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQTL+++L + +V +K+ IH+ IGMP GKQKL +
Sbjct: 699 GQTLNITLQISDTVATMKALIHEQIGMPPGKQKLQYE 735
>gi|322796789|gb|EFZ19216.1| hypothetical protein SINV_06548 [Solenopsis invicta]
Length = 769
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
+G KHPA +P L++EP KK+R+E+SLIPEQ FL++ P V N+ VP MT+K EWKLN
Sbjct: 642 IGLKHPASKP-LEDEPQAKKLRTEDSLIPEQQFLARNKGP-VQINIAVPMMTEKAEWKLN 699
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQTL+++L + +V +K+ IH+ IGMP GKQKL +
Sbjct: 700 GQTLNVTLQVSDTVATMKALIHEQIGMPPGKQKLQYE 736
>gi|156544891|ref|XP_001607229.1| PREDICTED: splicing factor 3A subunit 1-like [Nasonia vitripennis]
Length = 760
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
Query: 2 GRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNG 61
G KHPA E +++EP KK+R+E+SLIPEQ FL++ P V N+ VP M +K EWKLNG
Sbjct: 634 GMKHPA-EGGMEDEPQHKKLRTEDSLIPEQQFLARNKGP-VQLNIAVPMMAEKTEWKLNG 691
Query: 62 QTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
QTL +SL + S+ +K++IH+ GMP GKQKL +
Sbjct: 692 QTLQISLQITDSIATMKARIHEQTGMPPGKQKLQYE 727
>gi|345480982|ref|XP_001607186.2| PREDICTED: splicing factor 3A subunit 1-like [Nasonia vitripennis]
Length = 761
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
Query: 2 GRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNG 61
G KHPA E +++EP KK+R+E+SLIPEQ FL++ P V N+ VP M +K EWKLNG
Sbjct: 635 GMKHPA-EGGMEDEPQHKKLRTEDSLIPEQQFLARNNGP-VQLNIAVPMMAEKTEWKLNG 692
Query: 62 QTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
QTL +SL + SV +K++IH+ GMP GKQKL +
Sbjct: 693 QTLQISLQITDSVATMKARIHEQTGMPPGKQKLQYE 728
>gi|340712928|ref|XP_003395004.1| PREDICTED: splicing factor 3A subunit 1-like isoform 2 [Bombus
terrestris]
Length = 704
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
+G KH A EP ++EEP KK+R+E+SLIPEQ FL++ P V N+ VP MT+K EWKLN
Sbjct: 578 IGLKHTA-EP-MEEEPQTKKLRTEDSLIPEQQFLARNKGP-VQLNIAVPMMTEKAEWKLN 634
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQTL+++L L +V +K+ IH+ GMP GKQKL +
Sbjct: 635 GQTLNITLQLSDTVATMKALIHEQTGMPPGKQKLQYE 671
>gi|340712930|ref|XP_003395005.1| PREDICTED: splicing factor 3A subunit 1-like isoform 3 [Bombus
terrestris]
Length = 773
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
+G KH A EP ++EEP KK+R+E+SLIPEQ FL++ P V N+ VP MT+K EWKLN
Sbjct: 647 IGLKHTA-EP-MEEEPQTKKLRTEDSLIPEQQFLARNKGP-VQLNIAVPMMTEKAEWKLN 703
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQTL+++L L +V +K+ IH+ GMP GKQKL +
Sbjct: 704 GQTLNITLQLSDTVATMKALIHEQTGMPPGKQKLQYE 740
>gi|350419582|ref|XP_003492233.1| PREDICTED: splicing factor 3A subunit 1-like isoform 2 [Bombus
impatiens]
Length = 773
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
+G KH A EP ++EEP KK+R+E+SLIPEQ FL++ P V N+ VP MT+K EWKLN
Sbjct: 647 IGLKHTA-EP-MEEEPQTKKLRTEDSLIPEQQFLARNKGP-VQLNIAVPMMTEKAEWKLN 703
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQTL+++L L +V +K+ IH+ GMP GKQKL +
Sbjct: 704 GQTLNITLQLSDTVATMKALIHEQTGMPPGKQKLQYE 740
>gi|350419579|ref|XP_003492232.1| PREDICTED: splicing factor 3A subunit 1-like isoform 1 [Bombus
impatiens]
Length = 766
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
+G KH A EP ++EEP KK+R+E+SLIPEQ FL++ P V N+ VP MT+K EWKLN
Sbjct: 640 IGLKHTA-EP-MEEEPQTKKLRTEDSLIPEQQFLARNKGP-VQLNIAVPMMTEKAEWKLN 696
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQTL+++L L +V +K+ IH+ GMP GKQKL +
Sbjct: 697 GQTLNITLQLSDTVATMKALIHEQTGMPPGKQKLQYE 733
>gi|340712926|ref|XP_003395003.1| PREDICTED: splicing factor 3A subunit 1-like isoform 1 [Bombus
terrestris]
Length = 766
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
+G KH A EP ++EEP KK+R+E+SLIPEQ FL++ P V N+ VP MT+K EWKLN
Sbjct: 640 IGLKHTA-EP-MEEEPQTKKLRTEDSLIPEQQFLARNKGP-VQLNIAVPMMTEKAEWKLN 696
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQTL+++L L +V +K+ IH+ GMP GKQKL +
Sbjct: 697 GQTLNITLQLSDTVATMKALIHEQTGMPPGKQKLQYE 733
>gi|383847807|ref|XP_003699544.1| PREDICTED: splicing factor 3A subunit 1 [Megachile rotundata]
Length = 766
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
MG KHP EP ++EEP KK+R+E+SLIPEQ FL++ P V ++ VP MT+K EWKLN
Sbjct: 640 MGLKHPN-EP-MEEEPQTKKLRTEDSLIPEQQFLARNKGP-VQLSIAVPMMTEKAEWKLN 696
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQTL+++L + +V+ +K+ IH+ GMP GKQKL +
Sbjct: 697 GQTLNITLQVSDTVSTMKALIHEQTGMPPGKQKLQYE 733
>gi|110755900|ref|XP_393373.3| PREDICTED: splicing factor 3A subunit 1 isoform 1 [Apis mellifera]
Length = 766
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
+G KH A EP ++EEP KK+R+E+SLIPEQ FL++ P V N+ P MT+K EWKLN
Sbjct: 640 IGLKH-ATEP-MEEEPQTKKLRTEDSLIPEQQFLARNKGP-VQLNIAAPMMTEKAEWKLN 696
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQTL+++L L +V +K+ IH+ GMP GKQKL +
Sbjct: 697 GQTLNITLQLSDTVATMKALIHEQTGMPPGKQKLQYE 733
>gi|380021747|ref|XP_003694719.1| PREDICTED: splicing factor 3A subunit 1 isoform 2 [Apis florea]
Length = 704
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
+G KH A EP ++EEP KK+R+E+SLIPEQ FL++ P + N+ P MT+K EWKLN
Sbjct: 578 IGLKH-ATEP-MEEEPQTKKLRTEDSLIPEQQFLARNKGP-IQLNIAAPMMTEKAEWKLN 634
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQTL+++L L +V +K+ IH+ GMP GKQKL +
Sbjct: 635 GQTLNITLQLSDTVATMKALIHEQTGMPPGKQKLQYE 671
>gi|380021745|ref|XP_003694718.1| PREDICTED: splicing factor 3A subunit 1 isoform 1 [Apis florea]
Length = 766
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
+G KH A EP ++EEP KK+R+E+SLIPEQ FL++ P + N+ P MT+K EWKLN
Sbjct: 640 IGLKH-ATEP-MEEEPQTKKLRTEDSLIPEQQFLARNKGP-IQLNIAAPMMTEKAEWKLN 696
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQTL+++L L +V +K+ IH+ GMP GKQKL +
Sbjct: 697 GQTLNITLQLSDTVATMKALIHEQTGMPPGKQKLQYE 733
>gi|307196844|gb|EFN78280.1| Splicing factor 3 subunit 1 [Harpegnathos saltator]
Length = 772
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
+G KH A +P ++EEP KK+R+E+SLIPEQ FL++ P + N+ VP MT+K EWKLN
Sbjct: 646 LGLKHAA-KP-MEEEPQTKKLRTEDSLIPEQQFLARNKGP-IQINIAVPMMTEKAEWKLN 702
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQTL+++L + +V+ +K+ IH+ GMP GKQKL +
Sbjct: 703 GQTLNINLQVSDTVSTMKALIHEQTGMPPGKQKLQYE 739
>gi|307171518|gb|EFN63359.1| Splicing factor 3 subunit 1 [Camponotus floridanus]
Length = 792
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 13 DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
DEEP KK+R+E+SLIPEQ FL++ P + N+ VP MT+K EWKLNGQTL+++L L
Sbjct: 676 DEEPQTKKLRTEDSLIPEQQFLARNKGP-IQVNIAVPMMTEKAEWKLNGQTLNITLQLSD 734
Query: 73 SVTALKSQIHDLIGMPAGKQKLH 95
+V +K+ IH+ GMP GKQKL
Sbjct: 735 TVATMKALIHEQTGMPPGKQKLQ 757
>gi|326935507|ref|XP_003213811.1| PREDICTED: splicing factor 3A subunit 1-like [Meleagris gallopavo]
Length = 780
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EPV KK++SE+SLIPE+ FL + P VT V VPNM DK EWKLNGQ L +L L
Sbjct: 663 MEDEPVSKKLKSEDSLIPEEEFLRRNKGP-VTVKVQVPNMQDKTEWKLNGQVLVFTLPLS 721
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 722 DQVSVIKVKIHEATGMPAGKQKLQYE 747
>gi|148224586|ref|NP_001085709.1| MGC80562 protein [Xenopus laevis]
gi|49257315|gb|AAH73232.1| MGC80562 protein [Xenopus laevis]
Length = 802
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
L++EP KK++SE++LIPE+ FL + P VT V VPNM DK EWKL GQ LS +L L
Sbjct: 685 LEDEPAAKKMKSEDNLIPEEEFLRRNKGP-VTVKVQVPNMQDKTEWKLGGQVLSFTLPLS 743
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL D
Sbjct: 744 DQVSVIKVKIHEATGMPAGKQKLQYD 769
>gi|301609543|ref|XP_002934317.1| PREDICTED: splicing factor 3A subunit 1 [Xenopus (Silurana)
tropicalis]
Length = 799
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
L++EP KK++SE++LIPE+ FL + P VT V VPNM DK EWKL GQ LS +L L
Sbjct: 682 LEDEPAAKKMKSEDTLIPEEEFLRRNKGP-VTVKVQVPNMQDKTEWKLGGQMLSFTLPLP 740
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL D
Sbjct: 741 DQVSVIKVKIHEATGMPAGKQKLQYD 766
>gi|89272421|emb|CAJ82813.1| splicing factor 3a, subunit 1, 120kDa [Xenopus (Silurana)
tropicalis]
Length = 534
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
L++EP KK++SE++LIPE+ FL + P VT V VPNM DK EWKL GQ LS +L L
Sbjct: 417 LEDEPAAKKMKSEDTLIPEEEFLRRNKGP-VTVKVQVPNMQDKTEWKLGGQMLSFTLPLP 475
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL D
Sbjct: 476 DQVSVIKVKIHEATGMPAGKQKLQYD 501
>gi|327284313|ref|XP_003226883.1| PREDICTED: splicing factor 3A subunit 1-like [Anolis carolinensis]
Length = 808
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 13 DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
++EP KK++SE+SL+PE+ FL + P VT V VPNM DK EWKLNGQ L +L L
Sbjct: 692 EDEPASKKLKSEDSLMPEEEFLRRNKGP-VTVKVQVPNMQDKTEWKLNGQVLVFTLPLSD 750
Query: 73 SVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 751 QVSVIKVKIHEATGMPAGKQKLQFE 775
>gi|387916018|gb|AFK11618.1| splicing factor 3A subunit 1-like protein [Callorhinchus milii]
Length = 777
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EPV KK ++E++LIPE+ FL + P VT V VPNM DK EWKLNGQ L+ ++ L
Sbjct: 660 MEDEPVAKKSKTEDNLIPEEEFLRRNKGP-VTVKVQVPNMQDKSEWKLNGQVLTFTIPLT 718
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 719 DQVSVIKVKIHEATGMPAGKQKLQYE 744
>gi|126324919|ref|XP_001365265.1| PREDICTED: splicing factor 3A subunit 1 isoform 1 [Monodelphis
domestica]
Length = 791
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P VT V VPNM DK EWKLNGQ L +L L
Sbjct: 674 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VTIKVQVPNMQDKTEWKLNGQVLVFTLPLP 732
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 733 DQVSVIKVKIHEATGMPAGKQKLQYE 758
>gi|410976870|ref|XP_003994836.1| PREDICTED: splicing factor 3A subunit 1 isoform 2 [Felis catus]
Length = 730
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 613 MEDEPASKKLKTEDSLVPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 671
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 672 DQVSVIKVKIHEATGMPAGKQKLQYE 697
>gi|345791051|ref|XP_003433446.1| PREDICTED: splicing factor 3A subunit 1 [Canis lupus familiaris]
Length = 730
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 613 MEDEPASKKLKTEDSLVPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 671
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 672 DQVSVIKVKIHEATGMPAGKQKLQYE 697
>gi|301759551|ref|XP_002915615.1| PREDICTED: splicing factor 3A subunit 1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 738
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 621 MEDEPASKKLKTEDSLVPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 679
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 680 DQVSVIKVKIHEATGMPAGKQKLQYE 705
>gi|73995011|ref|XP_534733.2| PREDICTED: splicing factor 3A subunit 1 isoform 1 [Canis lupus
familiaris]
Length = 793
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPASKKLKTEDSLVPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|410976868|ref|XP_003994835.1| PREDICTED: splicing factor 3A subunit 1 isoform 1 [Felis catus]
Length = 793
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPASKKLKTEDSLVPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|355718824|gb|AES06397.1| splicing factor 3a, subunit 1, 120kDa [Mustela putorius furo]
Length = 792
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPASKKLKTEDSLVPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|301759549|ref|XP_002915614.1| PREDICTED: splicing factor 3A subunit 1-like isoform 1 [Ailuropoda
melanoleuca]
Length = 795
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 678 MEDEPASKKLKTEDSLVPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 736
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 737 DQVSVIKVKIHEATGMPAGKQKLQYE 762
>gi|281350137|gb|EFB25721.1| hypothetical protein PANDA_003630 [Ailuropoda melanoleuca]
Length = 773
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 656 MEDEPASKKLKTEDSLVPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 714
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 715 DQVSVIKVKIHEATGMPAGKQKLQYE 740
>gi|126324921|ref|XP_001365335.1| PREDICTED: splicing factor 3A subunit 1 isoform 2 [Monodelphis
domestica]
Length = 728
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P VT V VPNM DK EWKLNGQ L +L L
Sbjct: 611 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VTIKVQVPNMQDKTEWKLNGQVLVFTLPLP 669
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 670 DQVSVIKVKIHEATGMPAGKQKLQYE 695
>gi|224072312|ref|XP_002187063.1| PREDICTED: splicing factor 3A subunit 1 [Taeniopygia guttata]
Length = 778
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%), Gaps = 3/88 (3%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDL- 70
+++EPV KK++SE+SLIPE+ FL + P VT V VPNM DK EWKLNGQ L +L L
Sbjct: 659 MEDEPVSKKLKSEDSLIPEEEFLRRNKGP-VTVKVQVPNMQDKTEWKLNGQVLVFTLPLS 717
Query: 71 -RTSVTALKSQIHDLIGMPAGKQKLHLD 97
++ V +K +IH+ GMPAGKQKL +
Sbjct: 718 DQSCVFVIKVKIHEATGMPAGKQKLQYE 745
>gi|332375116|gb|AEE62699.1| unknown [Dendroctonus ponderosae]
Length = 754
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
M KHP P ++EEP KK+R+E+SLIPE+VFL++ +P V+ V +P M +K EWKLN
Sbjct: 627 MAVKHPNDGP-IEEEPSNKKLRNEDSLIPEEVFLARNPSP-VSIKVTIPMMPEKSEWKLN 684
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQ L +L L +V LK++I + + MP KQKL D
Sbjct: 685 GQVLGFTLPLADNVANLKTKIQEELNMPPAKQKLFFD 721
>gi|125630649|ref|NP_001074979.1| splicing factor 3A subunit 1 [Bos taurus]
gi|156637365|sp|A2VDN6.1|SF3A1_BOVIN RecName: Full=Splicing factor 3A subunit 1
gi|124828537|gb|AAI33329.1| Splicing factor 3a, subunit 1, 120kDa [Bos taurus]
gi|296478402|tpg|DAA20517.1| TPA: splicing factor 3 subunit 1 [Bos taurus]
Length = 793
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|149720280|ref|XP_001498274.1| PREDICTED: splicing factor 3A subunit 1 isoform 1 [Equus caballus]
Length = 793
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|432105148|gb|ELK31517.1| Splicing factor 3A subunit 1 [Myotis davidii]
Length = 789
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 672 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 730
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 731 DQVSVIKVKIHEATGMPAGKQKLQYE 756
>gi|149720282|ref|XP_001498301.1| PREDICTED: splicing factor 3A subunit 1 isoform 2 [Equus caballus]
Length = 730
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 613 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 671
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 672 DQVSVIKVKIHEATGMPAGKQKLQYE 697
>gi|426247500|ref|XP_004017523.1| PREDICTED: splicing factor 3A subunit 1 isoform 2 [Ovis aries]
Length = 722
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 605 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 663
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 664 DQVSVIKVKIHEATGMPAGKQKLQYE 689
>gi|397481673|ref|XP_003812064.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3A subunit 1 [Pan
paniscus]
Length = 793
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|348585217|ref|XP_003478368.1| PREDICTED: splicing factor 3A subunit 1-like isoform 2 [Cavia
porcellus]
Length = 730
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 613 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 671
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 672 DQVSVIKVKIHEATGMPAGKQKLQYE 697
>gi|444725985|gb|ELW66534.1| Splicing factor 3A subunit 1 [Tupaia chinensis]
Length = 820
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 703 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 761
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 762 DQVSVIKVKIHEATGMPAGKQKLQYE 787
>gi|417404660|gb|JAA49072.1| Putative splicing factor 3a subunit 1 [Desmodus rotundus]
Length = 793
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|410055777|ref|XP_001140260.2| PREDICTED: splicing factor 3A subunit 1 isoform 1 [Pan troglodytes]
Length = 730
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 613 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 671
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 672 DQVSVIKVKIHEATGMPAGKQKLQYE 697
>gi|351696144|gb|EHA99062.1| Splicing factor 3 subunit 1 [Heterocephalus glaber]
Length = 793
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|441618990|ref|XP_003258118.2| PREDICTED: splicing factor 3A subunit 1 isoform 2 [Nomascus
leucogenys]
Length = 730
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 613 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 671
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 672 DQVSVIKVKIHEATGMPAGKQKLQYE 697
>gi|426247498|ref|XP_004017522.1| PREDICTED: splicing factor 3A subunit 1 isoform 1 [Ovis aries]
Length = 785
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 668 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 726
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 727 DQVSVIKVKIHEATGMPAGKQKLQYE 752
>gi|350592616|ref|XP_003483501.1| PREDICTED: splicing factor 3A subunit 1 isoform 2 [Sus scrofa]
Length = 730
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 613 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 671
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 672 DQVSVIKVKIHEATGMPAGKQKLQYE 697
>gi|350592614|ref|XP_003483500.1| PREDICTED: splicing factor 3A subunit 1 isoform 1 [Sus scrofa]
gi|417515858|gb|JAA53734.1| splicing factor 3A subunit 1 [Sus scrofa]
Length = 793
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|431920891|gb|ELK18662.1| Splicing factor 3 subunit 1 [Pteropus alecto]
Length = 793
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|395833826|ref|XP_003789920.1| PREDICTED: splicing factor 3A subunit 1 [Otolemur garnettii]
Length = 793
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|344294822|ref|XP_003419114.1| PREDICTED: splicing factor 3A subunit 1-like isoform 2 [Loxodonta
africana]
Length = 730
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 613 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 671
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 672 DQVSVIKVKIHEATGMPAGKQKLQYE 697
>gi|383872866|ref|NP_001244628.1| splicing factor 3A subunit 1 [Macaca mulatta]
gi|355563576|gb|EHH20138.1| hypothetical protein EGK_02932 [Macaca mulatta]
gi|355784898|gb|EHH65749.1| hypothetical protein EGM_02579 [Macaca fascicularis]
gi|380785269|gb|AFE64510.1| splicing factor 3A subunit 1 isoform 1 [Macaca mulatta]
gi|383415061|gb|AFH30744.1| splicing factor 3A subunit 1 isoform 1 [Macaca mulatta]
gi|384944690|gb|AFI35950.1| splicing factor 3A subunit 1 isoform 1 [Macaca mulatta]
Length = 793
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|114685836|ref|XP_515067.2| PREDICTED: splicing factor 3A subunit 1 isoform 3 [Pan troglodytes]
Length = 793
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|410262508|gb|JAA19220.1| splicing factor 3a, subunit 1, 120kDa [Pan troglodytes]
Length = 793
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|348585215|ref|XP_003478367.1| PREDICTED: splicing factor 3A subunit 1-like isoform 1 [Cavia
porcellus]
Length = 793
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPASKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|343962471|dbj|BAK62823.1| splicing factor 3 subunit 1 [Pan troglodytes]
Length = 793
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|5032087|ref|NP_005868.1| splicing factor 3A subunit 1 isoform 1 [Homo sapiens]
gi|2498882|sp|Q15459.1|SF3A1_HUMAN RecName: Full=Splicing factor 3A subunit 1; AltName: Full=SF3a120;
AltName: Full=Spliceosome-associated protein 114;
Short=SAP 114
gi|899298|emb|CAA59494.1| human splicing factor [Homo sapiens]
gi|3212998|gb|AAC23435.1| spliceosome associated protein 114 (SF3a) [Homo sapiens]
gi|14043385|gb|AAH07684.1| Splicing factor 3a, subunit 1, 120kDa [Homo sapiens]
gi|45708497|gb|AAH01976.1| Splicing factor 3a, subunit 1, 120kDa [Homo sapiens]
gi|47678681|emb|CAG30461.1| SF3A1 [Homo sapiens]
gi|109451488|emb|CAK54605.1| SF3A1 [synthetic construct]
gi|109452084|emb|CAK54904.1| SF3A1 [synthetic construct]
gi|119580282|gb|EAW59878.1| splicing factor 3a, subunit 1, 120kDa, isoform CRA_a [Homo sapiens]
gi|119580283|gb|EAW59879.1| splicing factor 3a, subunit 1, 120kDa, isoform CRA_a [Homo sapiens]
gi|123984535|gb|ABM83613.1| splicing factor 3a, subunit 1, 120kDa [synthetic construct]
gi|123998511|gb|ABM86857.1| splicing factor 3a, subunit 1, 120kDa [synthetic construct]
gi|208965566|dbj|BAG72797.1| splicing factor 3a, subunit 1 [synthetic construct]
gi|410302806|gb|JAA30003.1| splicing factor 3a, subunit 1, 120kDa [Pan troglodytes]
gi|410341663|gb|JAA39778.1| splicing factor 3a, subunit 1, 120kDa [Pan troglodytes]
Length = 793
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|53831995|ref|NP_001005409.1| splicing factor 3A subunit 1 isoform 2 [Homo sapiens]
Length = 728
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 611 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 669
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 670 DQVSVIKVKIHEATGMPAGKQKLQYE 695
>gi|332217934|ref|XP_003258117.1| PREDICTED: splicing factor 3A subunit 1 isoform 1 [Nomascus
leucogenys]
gi|395753214|ref|XP_002831050.2| PREDICTED: splicing factor 3A subunit 1 isoform 3 [Pongo abelii]
gi|402883959|ref|XP_003905462.1| PREDICTED: splicing factor 3A subunit 1 [Papio anubis]
Length = 793
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|296191646|ref|XP_002743717.1| PREDICTED: splicing factor 3A subunit 1 isoform 1 [Callithrix
jacchus]
Length = 793
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|403295321|ref|XP_003938596.1| PREDICTED: splicing factor 3A subunit 1 [Saimiri boliviensis
boliviensis]
Length = 851
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 734 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 792
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 793 DQVSVIKVKIHEATGMPAGKQKLQYE 818
>gi|344294820|ref|XP_003419113.1| PREDICTED: splicing factor 3A subunit 1-like isoform 1 [Loxodonta
africana]
Length = 793
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|194381968|dbj|BAG64353.1| unnamed protein product [Homo sapiens]
Length = 690
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 573 MEDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 631
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 632 DQVSVIKVKIHEATGMPAGKQKLQYE 657
>gi|328712641|ref|XP_001944050.2| PREDICTED: splicing factor 3A subunit 1-like [Acyrthosiphon pisum]
Length = 753
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 13 DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
++EP+ KK ++E+SL PE F+ K P V FNV P +TDKPEW LNGQ L+++L L+
Sbjct: 637 EDEPLMKKQKTEDSLEPEIQFMMKFNGP-VMFNVGTPVLTDKPEWALNGQILNITLPLQE 695
Query: 73 SVTALKSQIHDLIGMPAGKQKLHLD 97
+V+ +K++IH+L GMP GKQKL D
Sbjct: 696 TVSVIKTKIHELTGMPPGKQKLQCD 720
>gi|260820991|ref|XP_002605817.1| hypothetical protein BRAFLDRAFT_123797 [Branchiostoma floridae]
gi|229291153|gb|EEN61827.1| hypothetical protein BRAFLDRAFT_123797 [Branchiostoma floridae]
Length = 781
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 10 PQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLD 69
P EEP KK ++E+SL+ E+ FL + P VTF ++VP M DK EW LNGQTL+ +L
Sbjct: 639 PPATEEPATKKQKTEDSLVSEEEFLKRNKGP-VTFKIIVPKMDDKSEWNLNGQTLTFTLP 697
Query: 70 LRTSVTALKSQIHDLIGMPAGKQKLHLD 97
+ +V+ +K++IH+ + MPAGKQKL +
Sbjct: 698 VTDTVSVIKAKIHEALAMPAGKQKLQYE 725
>gi|328696930|ref|XP_003240181.1| PREDICTED: splicing factor 3A subunit 1-like [Acyrthosiphon pisum]
Length = 752
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 13 DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
++EP+ KK ++E+SL PE F+ K P V FNV P +TDKPEW LNGQ L+++L L+
Sbjct: 636 EDEPLMKKQKTEDSLEPEIQFMMKFNGP-VMFNVGTPVLTDKPEWALNGQILNITLPLQE 694
Query: 73 SVTALKSQIHDLIGMPAGKQKLHLD 97
+V+ +K++IH+L GMP GKQKL D
Sbjct: 695 TVSVIKTKIHELTGMPPGKQKLQCD 719
>gi|260793707|ref|XP_002591852.1| hypothetical protein BRAFLDRAFT_89362 [Branchiostoma floridae]
gi|229277064|gb|EEN47863.1| hypothetical protein BRAFLDRAFT_89362 [Branchiostoma floridae]
Length = 717
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 10 PQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLD 69
P EEP KK ++E+SL+ E+ FL + P VTF ++VP M DK EW LNGQTL+ +L
Sbjct: 598 PPATEEPATKKQKTEDSLVSEEEFLKRNKGP-VTFKIIVPKMDDKSEWNLNGQTLTFTLP 656
Query: 70 LRTSVTALKSQIHDLIGMPAGKQKLHLD 97
+ +V+ +K++IH+ + MPAGKQKL +
Sbjct: 657 VTDTVSVIKAKIHEALAMPAGKQKLQYE 684
>gi|410922062|ref|XP_003974502.1| PREDICTED: splicing factor 3A subunit 1-like [Takifugu rubripes]
Length = 780
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 13 DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
D+EPV KK++SE++L+PE+ FL + P V V VPNM DK EWKL+GQ L+ ++ L
Sbjct: 664 DDEPVNKKMKSEDNLMPEEEFLRRNKGP-VAVKVQVPNMQDKTEWKLSGQVLNFTVPLTD 722
Query: 73 SVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 723 QVSVIKVKIHEATGMPAGKQKLQFE 747
>gi|426394056|ref|XP_004063318.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3A subunit 1
[Gorilla gorilla gorilla]
Length = 794
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 13 DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
++EP KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 678 EDEPTSKKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLTD 736
Query: 73 SVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 737 QVSVIKVKIHEATGMPAGKQKLQYE 761
>gi|71895509|ref|NP_001026643.1| splicing factor 3A subunit 1 [Gallus gallus]
gi|53127660|emb|CAG31159.1| hypothetical protein RCJMB04_2o2 [Gallus gallus]
Length = 791
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 57/86 (66%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EPV KK++SE+SLIPE+ FL + VPNM DK EWKLNGQ L +L L
Sbjct: 673 MEDEPVSKKLKSEDSLIPEEEFLPQEQGAQSQSKSKVPNMQDKTEWKLNGQVLVFTLPLS 732
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 733 DQVSVIKVKIHEATGMPAGKQKLQYE 758
>gi|198431297|ref|XP_002131185.1| PREDICTED: similar to splicing factor 3a, subunit 1 [Ciona
intestinalis]
Length = 755
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 5 HPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTL 64
HP +D P KK R+E L+P Q FL +M+ VTF+V PN DK EW L GQTL
Sbjct: 631 HPLQSQMMDGPPQAKKARTEADLMPAQTFL-QMSNGPVTFHVNCPNAPDKNEWNLVGQTL 689
Query: 65 SLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
+ +L L V+ +K++IH+ GMPAGKQKL LD
Sbjct: 690 TFTLPLTDEVSVIKAKIHESTGMPAGKQKLQLD 722
>gi|291409885|ref|XP_002721216.1| PREDICTED: splicing factor 3a, subunit 1, 120kDa isoform 2
[Oryctolagus cuniculus]
Length = 730
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+ E+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 613 MEDEPASKKLKTEDSLMSEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 671
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 672 DQVSVIKVKIHEATGMPAGKQKLQYE 697
>gi|291409883|ref|XP_002721215.1| PREDICTED: splicing factor 3a, subunit 1, 120kDa isoform 1
[Oryctolagus cuniculus]
Length = 793
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+ E+ FL + P V+ V VPNM DK EWKLNGQ L +L L
Sbjct: 676 MEDEPASKKLKTEDSLMSEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 735 DQVSVIKVKIHEATGMPAGKQKLQYE 760
>gi|440912864|gb|ELR62391.1| Splicing factor 3A subunit 1, partial [Bos grunniens mutus]
Length = 772
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+++EP KK+++E+SL+PE+ FL + ++ V VPNM DK EWKLNGQ L +L L
Sbjct: 656 MEDEPASKKLKTEDSLMPEEEFLRRNKA--LSIKVQVPNMQDKTEWKLNGQVLVFTLPLT 713
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 714 DQVSVIKVKIHEATGMPAGKQKLQYE 739
>gi|91076314|ref|XP_969681.1| PREDICTED: similar to spliceosome associated protein [Tribolium
castaneum]
gi|270002532|gb|EEZ98979.1| hypothetical protein TcasGA2_TC004839 [Tribolium castaneum]
Length = 759
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
M KHP+ E Q +EEP KK+R+E+SLIPE+VFLS+ P V+ + +P + +K EWKL
Sbjct: 632 MPVKHPS-ETQPEEEPSNKKMRNEDSLIPEEVFLSRNPNP-VSIKIAIPVVPEKTEWKLT 689
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
GQ ++L++ L SV+++KS+I + MP KQKL D
Sbjct: 690 GQMMALNVPLSESVSSIKSKIQEETNMPPAKQKLFYD 726
>gi|242011623|ref|XP_002426547.1| Splicing factor 3 subunit, putative [Pediculus humanus corporis]
gi|212510684|gb|EEB13809.1| Splicing factor 3 subunit, putative [Pediculus humanus corporis]
Length = 823
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 4 KHPAPEPQLDEEPV-GKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQ 62
KH A +EE V KK R+EE+L+PE FL+K + V+VP +KPEWKLNGQ
Sbjct: 696 KHVASSMMEEEETVPAKKQRTEETLLPESEFLNKYKNKPIVVKVLVPMTQEKPEWKLNGQ 755
Query: 63 TLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
+S+ L L SV +KS++H+ GMP GKQK+HL+
Sbjct: 756 LISMILPLTDSVAVVKSKVHEETGMPPGKQKIHLE 790
>gi|291238292|ref|XP_002739067.1| PREDICTED: splicing factor 3a, subunit 1, 120kDa-like [Saccoglossus
kowalevskii]
Length = 798
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+ EEP KK ++E++L+PE +FL K P V F V VP++ DKPEWKLNGQ L+++L +
Sbjct: 681 MQEEPPAKKQKTEDTLLPENLFLVKNPGP-VMFKVQVPHLPDKPEWKLNGQALTMTLPIT 739
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
++ +K+++ + +GMP GKQKL L+
Sbjct: 740 DQISVIKAKLFEELGMPTGKQKLQLE 765
>gi|432874742|ref|XP_004072570.1| PREDICTED: splicing factor 3A subunit 1-like [Oryzias latipes]
Length = 781
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 13 DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
++EP KK+++E++L+PE+ FL + P V V VPNM DK EWKLNGQ L+ ++ L
Sbjct: 665 EDEPSSKKMKTEDNLMPEEEFLRRNKGP-VAVKVQVPNMQDKTEWKLNGQILNFTVPLTD 723
Query: 73 SVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 724 QVSVIKVKIHEATGMPAGKQKLQYE 748
>gi|427793407|gb|JAA62155.1| Putative splicing factor 3a subunit 1 120kda strongylocentrotus
purpuratus, partial [Rhipicephalus pulchellus]
Length = 612
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 13 DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
D+EP KK ++EE+LIPE FL+K P VT V VP +K EWKLNGQ L+++L L
Sbjct: 496 DDEPPSKKSKTEENLIPEAEFLAKNKGP-VTVRVQVPGAQEKVEWKLNGQLLTMTLPLTD 554
Query: 73 SVTALKSQIHDLIGMPAGKQKLHLD 97
+V+ LK+++H+ +GMP GKQKL +
Sbjct: 555 TVSVLKAKLHEELGMPPGKQKLQYE 579
>gi|427792909|gb|JAA61906.1| Putative ubiquitin-like domain of mammalian splicing factor,
partial [Rhipicephalus pulchellus]
Length = 314
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 13 DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
D+EP KK ++EE+LIPE FL+K P VT V VP +K EWKLNGQ L+++L L
Sbjct: 198 DDEPPSKKSKTEENLIPEAEFLAKNKGP-VTVRVQVPGAQEKVEWKLNGQLLTMTLPLTD 256
Query: 73 SVTALKSQIHDLIGMPAGKQKLHLD 97
+V+ LK+++H+ +GMP GKQKL +
Sbjct: 257 TVSVLKAKLHEELGMPPGKQKLQYE 281
>gi|26326219|dbj|BAC26853.1| unnamed protein product [Mus musculus]
Length = 791
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK+++E+SL+PE+ FL + P V+ V+VPNM DK EWKLNGQ L +L L V+ +K
Sbjct: 681 KKLKTEDSLMPEEEFLRRNKGP-VSIKVLVPNMQDKTEWKLNGQGLVFTLPLTDQVSVIK 739
Query: 79 SQIHDLIGMPAGKQKLHLD 97
+IH+ GMPAGKQKL +
Sbjct: 740 VKIHEATGMPAGKQKLQYE 758
>gi|427788733|gb|JAA59818.1| Putative spliceosome associated protein [Rhipicephalus pulchellus]
Length = 839
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 13 DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
D+EP KK ++EE+LIPE FL+K P VT V VP +K EWKLNGQ L+++L L
Sbjct: 723 DDEPPSKKSKTEENLIPEAEFLAKNKGP-VTVRVQVPGAQEKVEWKLNGQLLTMTLPLTD 781
Query: 73 SVTALKSQIHDLIGMPAGKQKLHLD 97
+V+ LK+++H+ +GMP GKQKL +
Sbjct: 782 TVSVLKAKLHEELGMPPGKQKLQYE 806
>gi|395517104|ref|XP_003762722.1| PREDICTED: splicing factor 3A subunit 1 [Sarcophilus harrisii]
Length = 855
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 17 VGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTA 76
KK+++E+SL+PE+ FL + P VT V VPNM DK EWKLNGQ L +L L V+
Sbjct: 743 ASKKLKTEDSLMPEEEFLRRNKGP-VTIKVQVPNMQDKTEWKLNGQVLVFTLPLPDQVSV 801
Query: 77 LKSQIHDLIGMPAGKQKLHLD 97
+K +IH+ GMPAGKQKL +
Sbjct: 802 IKVKIHEATGMPAGKQKLQYE 822
>gi|213515464|ref|NP_001135217.1| splicing factor 3A subunit 1 [Salmo salar]
gi|209154324|gb|ACI33394.1| Splicing factor 3 subunit 1 [Salmo salar]
Length = 789
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 13 DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
++EP KK+++E++L+PE+ FL + +V+ V VPNM DK EWKL+GQ L+ ++ L
Sbjct: 673 NDEPASKKMKTEDNLMPEEEFLRRYKG-SVSVTVQVPNMQDKTEWKLSGQALNFTIPLTD 731
Query: 73 SVTALKSQIHDLIGMPAGKQKLHLD 97
V+ +K +IH+ GMPAGKQKL +
Sbjct: 732 QVSVIKVKIHEATGMPAGKQKLQYE 756
>gi|405957021|gb|EKC23260.1| Splicing factor 3 subunit 1 [Crassostrea gigas]
Length = 748
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK ++E+ LIPE++FLS+ P VTF V VP + DKPEW L GQT+S +L L +++ +K
Sbjct: 638 KKQKTEDQLIPEEIFLSRHKGP-VTFKVSVPKVEDKPEWNLKGQTVSFTLPLTDTISVMK 696
Query: 79 SQIHDLIGMPAGKQKLHLD 97
+++++ +G+PAGKQKL +
Sbjct: 697 AKLNESLGIPAGKQKLQYE 715
>gi|351701919|gb|EHB04838.1| Splicing factor 3 subunit 1 [Heterocephalus glaber]
Length = 127
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 8 PEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLS 67
P P +++EP KK+++E+SL+PE+ L K P V+ V VPNM DK EWKLNGQ
Sbjct: 6 PPPPMEDEPASKKLKTEDSLMPEEELLHKNKGP-VSIKVQVPNMQDKTEWKLNGQVQVFI 64
Query: 68 LDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
L L V+ +K +IH+ G+PAGKQ+L +
Sbjct: 65 LPLTDQVSVIKVKIHEATGIPAGKQQLQYE 94
>gi|157821905|ref|NP_001100705.1| splicing factor 3A subunit 1 [Rattus norvegicus]
gi|149047546|gb|EDM00216.1| splicing factor 3a, subunit 1 (predicted) [Rattus norvegicus]
Length = 791
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L V+ +K
Sbjct: 681 KKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQGLVFTLPLTDQVSVIK 739
Query: 79 SQIHDLIGMPAGKQKLHLD 97
+IH+ GMPAGKQKL +
Sbjct: 740 VKIHEATGMPAGKQKLQYE 758
>gi|26324776|dbj|BAC26142.1| unnamed protein product [Mus musculus]
Length = 791
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L V+ +K
Sbjct: 681 KKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQGLVFTLPLTDQVSVIK 739
Query: 79 SQIHDLIGMPAGKQKLHLD 97
+IH+ GMPAGKQKL +
Sbjct: 740 VKIHEATGMPAGKQKLQYE 758
>gi|354493857|ref|XP_003509056.1| PREDICTED: splicing factor 3A subunit 1 isoform 1 [Cricetulus
griseus]
gi|344254699|gb|EGW10803.1| Splicing factor 3 subunit 1 [Cricetulus griseus]
Length = 793
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L V+ +K
Sbjct: 683 KKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQGLVFTLPLTDQVSVIK 741
Query: 79 SQIHDLIGMPAGKQKLHLD 97
+IH+ GMPAGKQKL +
Sbjct: 742 VKIHEATGMPAGKQKLQYE 760
>gi|165932270|ref|NP_080451.4| splicing factor 3A subunit 1 [Mus musculus]
gi|68566085|sp|Q8K4Z5.1|SF3A1_MOUSE RecName: Full=Splicing factor 3A subunit 1; AltName: Full=SF3a120
gi|20988230|gb|AAH29753.1| Splicing factor 3a, subunit 1 [Mus musculus]
gi|148708518|gb|EDL40465.1| splicing factor 3a, subunit 1 [Mus musculus]
Length = 791
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L V+ +K
Sbjct: 681 KKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQGLVFTLPLTDQVSVIK 739
Query: 79 SQIHDLIGMPAGKQKLHLD 97
+IH+ GMPAGKQKL +
Sbjct: 740 VKIHEATGMPAGKQKLQYE 758
>gi|26325080|dbj|BAC26294.1| unnamed protein product [Mus musculus]
Length = 791
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L V+ +K
Sbjct: 681 KKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQGLVFTLPLTDQVSVIK 739
Query: 79 SQIHDLIGMPAGKQKLHLD 97
+IH+ GMPAGKQKL +
Sbjct: 740 VKIHEATGMPAGKQKLQYE 758
>gi|348516110|ref|XP_003445582.1| PREDICTED: splicing factor 3A subunit 1-like [Oreochromis
niloticus]
Length = 785
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 17 VGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTA 76
V KK+++E++LIPE+ FL + P V V VPNM DK EWKLNGQ L+ ++ + V+
Sbjct: 673 VSKKMKTEDNLIPEEEFLRRNKGP-VAVKVQVPNMQDKSEWKLNGQVLNFTVPVTDQVSV 731
Query: 77 LKSQIHDLIGMPAGKQKLHLD 97
+K +IH+ GMPAGKQKL +
Sbjct: 732 IKVKIHEATGMPAGKQKLQYE 752
>gi|354493859|ref|XP_003509057.1| PREDICTED: splicing factor 3A subunit 1 isoform 2 [Cricetulus
griseus]
Length = 730
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L V+ +K
Sbjct: 620 KKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQGLVFTLPLTDQVSVIK 678
Query: 79 SQIHDLIGMPAGKQKLHLD 97
+IH+ GMPAGKQKL +
Sbjct: 679 VKIHEATGMPAGKQKLQYE 697
>gi|391338324|ref|XP_003743509.1| PREDICTED: splicing factor 3A subunit 1-like [Metaseiulus
occidentalis]
Length = 768
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Query: 14 EEPVGKKIRSEESLIPEQVFLSKMATPNV-TFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
EEP KK ++E+ LIPE+ FL P+V + VP+M DKPEW+LNGQ S+++ L+
Sbjct: 653 EEPTTKKAKTEDQLIPEEDFLR--TQPDVIAVRIAVPHMADKPEWRLNGQIASVNVPLKE 710
Query: 73 SVTALKSQIHDLIGMPAGKQKLHLD 97
+ ALKS+I ++ GMP GKQKL D
Sbjct: 711 TFGALKSRIQEITGMPPGKQKLVYD 735
>gi|14715118|gb|AAH10727.1| Sf3a1 protein [Mus musculus]
Length = 177
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK+++E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L V+ +K
Sbjct: 67 KKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQGLVFTLPLTDQVSVIK 125
Query: 79 SQIHDLIGMPAGKQKLHLD 97
+IH+ GMPAGKQKL +
Sbjct: 126 VKIHEATGMPAGKQKLQYE 144
>gi|74213581|dbj|BAE35597.1| unnamed protein product [Mus musculus]
Length = 791
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK+++E+SL+PE+ FL + P V+ V VPNM DK EW+LNGQ L +L L V+ +K
Sbjct: 681 KKLKTEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWELNGQGLVFTLPLTDQVSVIK 739
Query: 79 SQIHDLIGMPAGKQKLHLD 97
+IH+ GMPAGKQKL +
Sbjct: 740 VKIHEATGMPAGKQKLQYE 758
>gi|449683217|ref|XP_002154235.2| PREDICTED: splicing factor 3A subunit 1-like [Hydra magnipapillata]
Length = 830
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Query: 8 PEPQLDEEPVGKKIRSEES---LIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTL 64
P P+ D+EP KK + +E+ L+ E FL P VTF V VP + +KPEW+ GQ +
Sbjct: 706 PPPKDDDEPQSKKSKLDETDTELVSEAEFLQNNKLP-VTFRVQVPEIPEKPEWQCQGQVI 764
Query: 65 SLSLDLRTSVTALKSQIHDLIGMPAGKQKLHL 96
S++L L T + +KS+I+D+IGMPAGKQKL +
Sbjct: 765 SITLPLTTQCSVIKSKINDMIGMPAGKQKLQI 796
>gi|195500148|ref|XP_002097251.1| GE26116 [Drosophila yakuba]
gi|194183352|gb|EDW96963.1| GE26116 [Drosophila yakuba]
Length = 784
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
Query: 7 APEPQLD---EEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQT 63
AP P +D EEP KKIRSE++LIPE F++ +P VT V+VPN +DK EWKLNGQ
Sbjct: 660 APAPPVDIMEEEPPSKKIRSEDNLIPEAEFIASHKSP-VTIQVLVPN-SDKSEWKLNGQM 717
Query: 64 LSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
+++++ L + LK+++ D GMP KQK+ +
Sbjct: 718 IAVTMALSEPIANLKTKLQDETGMPPAKQKIFYE 751
>gi|346465933|gb|AEO32811.1| hypothetical protein [Amblyomma maculatum]
Length = 210
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
+D+EP KK ++EESLIPE FL+K P VT V VP DKPEWKL+GQ L+L+L L
Sbjct: 93 VDDEPPSKKSKTEESLIPEAEFLAKNKGP-VTVRVQVPGAQDKPEWKLHGQVLTLTLPLT 151
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
+V+ LK+++H+ +GMP GKQKL +
Sbjct: 152 DTVSVLKAKLHEELGMPPGKQKLQYE 177
>gi|390361542|ref|XP_795042.3| PREDICTED: splicing factor 3A subunit 1-like [Strongylocentrotus
purpuratus]
Length = 806
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 14 EEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTS 73
+EP K+ ++E+ LIPE+ FL+ +V FNVV P + DKPEWKL+GQ ++L++ L
Sbjct: 691 DEPPSKRQKTEDDLIPEEQFLATHKG-SVMFNVVCPLVQDKPEWKLHGQRITLNMPLTDQ 749
Query: 74 VTALKSQIHDLIGMPAGKQKLH 95
V+ +K+++H+ +G+PAGKQKL
Sbjct: 750 VSVIKAKLHEQLGIPAGKQKLQ 771
>gi|195349233|ref|XP_002041151.1| GM15394 [Drosophila sechellia]
gi|194122756|gb|EDW44799.1| GM15394 [Drosophila sechellia]
Length = 784
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
Query: 7 APEPQLD---EEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQT 63
AP P +D EEP KKIRSE++LIPE F++ +P VT V+VPN +DK EWKLNGQ
Sbjct: 660 APAPPVDIIEEEPPSKKIRSEDNLIPEAEFIATHKSP-VTIQVLVPN-SDKSEWKLNGQM 717
Query: 64 LSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
+++++ L + LK+++ D GMP KQK+ +
Sbjct: 718 IAVTMALSEPIANLKTKLQDETGMPPAKQKIFYE 751
>gi|195454314|ref|XP_002074185.1| GK12756 [Drosophila willistoni]
gi|194170270|gb|EDW85171.1| GK12756 [Drosophila willistoni]
Length = 793
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
++EEP KKIRSE++L+PE F+S +P VT V VPN TDK EWKLNGQ ++++L L
Sbjct: 677 MEEEPPTKKIRSEDNLVPEAEFISLHKSP-VTIQVQVPN-TDKSEWKLNGQMIAITLALT 734
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
+ LK+++ D GMP KQK+ +
Sbjct: 735 DQIAQLKAKLQDETGMPPAKQKIFYE 760
>gi|24647566|ref|NP_650583.1| CG16941 [Drosophila melanogaster]
gi|7300207|gb|AAF55372.1| CG16941 [Drosophila melanogaster]
gi|15010428|gb|AAK77262.1| GH03554p [Drosophila melanogaster]
gi|220947540|gb|ACL86313.1| CG16941-PA [synthetic construct]
Length = 784
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
Query: 7 APEPQLD---EEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQT 63
AP P +D EEP KKIRSE++LIPE F++ +P VT V+VPN +DK EWKLNGQ
Sbjct: 660 APAPPVDIMEEEPPSKKIRSEDNLIPEADFIATHKSP-VTIQVLVPN-SDKSEWKLNGQM 717
Query: 64 LSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
+++++ L + LK+++ D GMP KQK+ +
Sbjct: 718 IAVTMALSEPIANLKTKLQDETGMPPAKQKIFYE 751
>gi|443702337|gb|ELU00426.1| hypothetical protein CAPTEDRAFT_220618 [Capitella teleta]
Length = 732
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 23 SEESLIPEQVFLSKMATPN-VTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQI 81
SE++L+PE+ FL + V F V +PNM +K EW LNGQT S SL L +V+ +K+++
Sbjct: 624 SEDNLVPEKNFLYAHQSKGPVPFTVQIPNMPEKTEWTLNGQTQSFSLPLTDTVSVIKAKL 683
Query: 82 HDLIGMPAGKQKLHLD 97
H+ +GMPAGKQKL LD
Sbjct: 684 HEAVGMPAGKQKLQLD 699
>gi|443706424|gb|ELU02488.1| hypothetical protein CAPTEDRAFT_224293 [Capitella teleta]
Length = 354
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 23 SEESLIPEQVFLSKMATPN-VTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQI 81
SE++L+PE+ FL + V F V +PNM +K EW LNGQT S SL L +V+ +K+++
Sbjct: 246 SEDNLVPEKNFLYAHQSKGPVPFTVQIPNMPEKTEWTLNGQTQSFSLPLTDTVSVIKAKL 305
Query: 82 HDLIGMPAGKQKLHLD 97
H+ +GMPAGKQKL LD
Sbjct: 306 HEAVGMPAGKQKLQLD 321
>gi|156408520|ref|XP_001641904.1| predicted protein [Nematostella vectensis]
gi|156229045|gb|EDO49841.1| predicted protein [Nematostella vectensis]
Length = 762
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Query: 13 DEEPVGKKIR---SEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLD 69
D++ KK R E LIPE FL K P V F V VPN+ DK EWKL GQ ++L+L
Sbjct: 643 DDDASNKKSRVEGPEGDLIPEAQFL-KTHPPTVRFTVQVPNIPDKAEWKLEGQLITLALP 701
Query: 70 LRTSVTALKSQIHDLIGMPAGKQKLHL 96
L V+ +K++IH+ IGMPAGKQKL L
Sbjct: 702 LTDQVSVIKAKIHETIGMPAGKQKLQL 728
>gi|156340745|ref|XP_001620541.1| hypothetical protein NEMVEDRAFT_v1g231473 [Nematostella vectensis]
gi|156205594|gb|EDO28441.1| predicted protein [Nematostella vectensis]
Length = 160
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Query: 13 DEEPVGKKIRSEE---SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLD 69
D++ KK R E LIPE FL K P V F V VPN+ DK EWKL GQ ++L+L
Sbjct: 41 DDDASNKKSRVEGPEGDLIPEAQFL-KTHPPTVRFTVQVPNIPDKAEWKLEGQLITLALP 99
Query: 70 LRTSVTALKSQIHDLIGMPAGKQKLHL 96
L V+ +K++IH+ IGMPAGKQKL L
Sbjct: 100 LTDQVSVIKAKIHETIGMPAGKQKLQL 126
>gi|195146423|ref|XP_002014184.1| GL22994 [Drosophila persimilis]
gi|194103127|gb|EDW25170.1| GL22994 [Drosophila persimilis]
Length = 492
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
++EEP KK+RSE++LIPE F+S +P VT V+VPN +DK EWKLNGQ ++++L L
Sbjct: 376 VEEEPPTKKLRSEDNLIPEAEFISTHKSP-VTIQVLVPN-SDKSEWKLNGQMIAVTLALT 433
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
+ LK+++ D GMP KQK+ +
Sbjct: 434 DPIANLKAKLQDETGMPPAKQKIFYE 459
>gi|449676007|ref|XP_002159698.2| PREDICTED: uncharacterized protein LOC100199704 [Hydra
magnipapillata]
Length = 368
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Query: 8 PEPQLDEEPVGKKIRSEES---LIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTL 64
P P+ D+EP KK + +E+ L+ + FL P VTF V VP + +KPEW+ GQ +
Sbjct: 255 PPPKDDDEPQSKKSKLDETDTELVSKAEFLQSNKLP-VTFRVQVPEIPEKPEWQCQGQVI 313
Query: 65 SLSLDLRTSVTALKSQIHDLIGMPAGKQKLHL 96
S++L L T + +KS+I+D+IGMPAGKQKL +
Sbjct: 314 SITLPLTTQCSVIKSKINDMIGMPAGKQKLQI 345
>gi|198453118|ref|XP_001359075.2| GA14228 [Drosophila pseudoobscura pseudoobscura]
gi|198132218|gb|EAL28218.2| GA14228 [Drosophila pseudoobscura pseudoobscura]
Length = 788
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
++EEP KK+RSE++LIPE F+S +P VT V+VPN +DK EWKLNGQ ++++L L
Sbjct: 672 VEEEPPTKKLRSEDNLIPEAEFISTHKSP-VTIQVLVPN-SDKSEWKLNGQMIAVTLALT 729
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
+ LK+++ D GMP KQK+ +
Sbjct: 730 DPIANLKAKLQDETGMPPAKQKIFYE 755
>gi|195107251|ref|XP_001998227.1| GI23747 [Drosophila mojavensis]
gi|193914821|gb|EDW13688.1| GI23747 [Drosophila mojavensis]
Length = 788
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 5/95 (5%)
Query: 6 PAPEPQL---DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQ 62
PAP +L +EEP KK+RSE++LIPE F+++ +P VT V VP+ TDK EWKLNGQ
Sbjct: 663 PAPPVELMPIEEEPPTKKMRSEDNLIPEAEFIAQHKSP-VTIQVQVPS-TDKSEWKLNGQ 720
Query: 63 TLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
++++L L + LKS++ D GMP KQK+ +
Sbjct: 721 MIAITLALTDPIANLKSKLQDETGMPPAKQKIFYE 755
>gi|194742515|ref|XP_001953748.1| GF17916 [Drosophila ananassae]
gi|190626785|gb|EDV42309.1| GF17916 [Drosophila ananassae]
Length = 792
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 6/95 (6%)
Query: 7 APEPQLD----EEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQ 62
AP P +D +EP KK+RSE++LIPE F++ +P VT V VPN +DK EWKLNGQ
Sbjct: 667 APAPPVDLMVEDEPPTKKMRSEDNLIPEADFIASHKSP-VTIQVQVPN-SDKSEWKLNGQ 724
Query: 63 TLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
++++L L ++ LKS++ D GMP KQK+ +
Sbjct: 725 MIAITLPLTEPISTLKSKLQDETGMPPAKQKIFYE 759
>gi|158287238|ref|XP_564160.3| AGAP011328-PA [Anopheles gambiae str. PEST]
gi|157019555|gb|EAL41531.3| AGAP011328-PA [Anopheles gambiae str. PEST]
Length = 714
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 10 PQLDEEPVGKKIRSEESLIPEQVFLSKM-ATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL 68
P +DE P KK R+E++LI E VFL + A +T V PNMT+K +WKLNGQ LSL++
Sbjct: 594 PAMDEPP-NKKSRTEDNLIEESVFLQRHGAVGPITVQVQCPNMTEKNDWKLNGQILSLTV 652
Query: 69 DLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
+L +V+++K+++ GMP KQK+ D
Sbjct: 653 NLTDTVSSVKAKVQTETGMPPAKQKIFYD 681
>gi|146331716|gb|ABQ22364.1| splicing factor 3 subunit 1-like protein [Callithrix jacchus]
Length = 106
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQIHD 83
E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L V+ +K +IH+
Sbjct: 1 EDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQVLVFTLPLTDQVSVIKVKIHE 59
Query: 84 LIGMPAGKQKLHLD 97
GMPAGKQKL +
Sbjct: 60 ATGMPAGKQKLQYE 73
>gi|159163268|pdb|1WE7|A Chain A, Solution Structure Of Ubiquitin-Like Domain In Sf3a120
Length = 115
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 23 SEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQIH 82
+E+SL+PE+ FL + P V+ V VPNM DK EWKLNGQ L +L L V+ +K +IH
Sbjct: 8 TEDSLMPEEEFLRRNKGP-VSIKVQVPNMQDKTEWKLNGQGLVFTLPLTDQVSVIKVKIH 66
Query: 83 DLIGMPAGKQKLHLD 97
+ GMPAGKQKL +
Sbjct: 67 EATGMPAGKQKLQYE 81
>gi|41056131|ref|NP_956388.1| splicing factor 3A subunit 1 [Danio rerio]
gi|16501181|emb|CAD10078.1| novel protein similar to human splicing factor 3a, subunit 1, 120kD
(SF3A1) [Danio rerio]
gi|33989708|gb|AAH56521.1| Splicing factor 3a, subunit 1 [Danio rerio]
gi|42542481|gb|AAH66392.1| Sf3a1 protein [Danio rerio]
gi|213625869|gb|AAI71508.1| Splicing factor 3a, subunit 1 [Danio rerio]
gi|213627830|gb|AAI71506.1| Splicing factor 3a, subunit 1 [Danio rerio]
Length = 780
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 18 GKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTAL 77
KK+++E++LI E FL + P V V VPNM DK EWKL+GQ L+ +L L V+ +
Sbjct: 669 SKKMKTEDNLIAEDEFLRRNKGP-VAVKVQVPNMQDKTEWKLSGQVLNFNLPLTDQVSVI 727
Query: 78 KSQIHDLIGMPAGKQKLHLD 97
K +IH+ GMPAGKQKL +
Sbjct: 728 KVKIHEATGMPAGKQKLQYE 747
>gi|195038678|ref|XP_001990782.1| GH18068 [Drosophila grimshawi]
gi|193894978|gb|EDV93844.1| GH18068 [Drosophila grimshawi]
Length = 799
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 5/95 (5%)
Query: 6 PAPEPQL---DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQ 62
PAP +L ++EP KKIRSE++L+PE F++ +P VT V VP+ TDK EWKLNGQ
Sbjct: 674 PAPPVELIPIEDEPPTKKIRSEDNLVPEAEFIANHKSP-VTIQVQVPS-TDKSEWKLNGQ 731
Query: 63 TLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
++++L L + LK+++ D GMP KQK+ +
Sbjct: 732 MIAVTLALTDPIANLKAKLQDDTGMPPAKQKIFYE 766
>gi|194900544|ref|XP_001979817.1| GG16800 [Drosophila erecta]
gi|190651520|gb|EDV48775.1| GG16800 [Drosophila erecta]
Length = 792
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 12/102 (11%)
Query: 7 APEPQLD---EEPVGKKIRSEESLIPEQVFLS--------KMATPNVTFNVVVPNMTDKP 55
AP P +D EEP KKIRSE++LIPE F++ +M VT V+VPN +DK
Sbjct: 659 APAPPVDIMEEEPPSKKIRSEDNLIPEAEFIAAHKASLTWEMDMSPVTIQVLVPN-SDKS 717
Query: 56 EWKLNGQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
EWKLNGQ +++++ L + LK+++ D GMP KQK+ +
Sbjct: 718 EWKLNGQMIAVTMALSEPIANLKTKLQDETGMPPAKQKIFYE 759
>gi|195997621|ref|XP_002108679.1| hypothetical protein TRIADDRAFT_19623 [Trichoplax adhaerens]
gi|190589455|gb|EDV29477.1| hypothetical protein TRIADDRAFT_19623 [Trichoplax adhaerens]
Length = 738
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 3 RKHPAPEPQLDEEPVGKKIRSEE--SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
R P EP EP+ KK++++ L PE FL++ P VTF V VP++ +K EWKLN
Sbjct: 611 RAEPTREPD-KAEPLQKKLKADTDTGLTPEAEFLARNP-PFVTFKVQVPSLPEKNEWKLN 668
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHL 96
GQ +S +L L+ ++ +K++IH+ G+P+GKQKL +
Sbjct: 669 GQMISFNLPLKDQISTIKTKIHESTGLPSGKQKLQI 704
>gi|195394364|ref|XP_002055815.1| GJ10593 [Drosophila virilis]
gi|194142524|gb|EDW58927.1| GJ10593 [Drosophila virilis]
Length = 780
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 5/95 (5%)
Query: 6 PAPEPQL---DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQ 62
PAP +L ++EP KKIRSE++L+PE F++ +P VT V VPN T+K EWKLNGQ
Sbjct: 655 PAPPVELMPIEDEPPTKKIRSEDNLVPEAEFIALHKSP-VTIQVQVPN-TEKSEWKLNGQ 712
Query: 63 TLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
++++L L + LK+++ D GMP KQK+ +
Sbjct: 713 MIAVTLALTDPIANLKAKLQDETGMPPAKQKIFYE 747
>gi|170060923|ref|XP_001866017.1| splicing factor 3 subunit 1 [Culex quinquefasciatus]
gi|167879254|gb|EDS42637.1| splicing factor 3 subunit 1 [Culex quinquefasciatus]
Length = 779
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 8 PEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLS 67
P LD EP KK R E+ LI E VF+ + P VT V PN+T+K EWKL+GQT+S+
Sbjct: 659 PNIDLDAEPPNKKSR-EDHLIEESVFMQRHKGP-VTIQVQCPNLTEKSEWKLSGQTISMQ 716
Query: 68 LDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
L L SVT +K ++ GMP KQK+ +
Sbjct: 717 LQLTDSVTVMKGKLQAETGMPPAKQKIFYE 746
>gi|340378236|ref|XP_003387634.1| PREDICTED: splicing factor 3A subunit 1-like [Amphimedon
queenslandica]
Length = 677
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 19 KKIRSE-ESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTAL 77
KK +S+ ++LIPE F++ P VTF V+VPN+ ++ EW LNGQ LS+SL + V+ +
Sbjct: 566 KKPKSDIDNLIPENQFIASHPGP-VTFTVLVPNVGERSEWPLNGQNLSISLPITDPVSVI 624
Query: 78 KSQIHDLIGMPAGKQKLHL 96
KS+I D +GMP GKQKL +
Sbjct: 625 KSKIADELGMPPGKQKLQI 643
>gi|47191726|emb|CAF89379.1| unnamed protein product [Tetraodon nigroviridis]
Length = 104
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 26 SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQIHDLI 85
+LIPE+ FL + P V V VPNM DK EWKL+GQ L+ ++ L V+ +K +IH+
Sbjct: 1 NLIPEEEFLRRNKGP-VAVKVQVPNMQDKSEWKLSGQVLNFTVPLTDQVSVIKVKIHEAT 59
Query: 86 GMPAGKQKLHLD 97
GMPAGKQKL +
Sbjct: 60 GMPAGKQKLQFE 71
>gi|157137559|ref|XP_001664008.1| spliceosome associated protein [Aedes aegypti]
gi|108869691|gb|EAT33916.1| AAEL013818-PA [Aedes aegypti]
Length = 785
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 6 PAPEPQ-LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTL 64
P EP + +EP KK R+E+ LI E VFL + P VT V P + +K EWKLNGQ +
Sbjct: 661 PVTEPTTIGDEPPSKKSRTEDHLIEEGVFLQRHKGP-VTIQVQCPTLAEKSEWKLNGQIV 719
Query: 65 SLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
++ L L +V+ LK ++ GMP KQK+ +
Sbjct: 720 AMQLQLTDAVSVLKGKLQAETGMPPAKQKIFYE 752
>gi|357606848|gb|EHJ65243.1| putative spliceosome associated protein [Danaus plexippus]
Length = 730
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 11 QLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDL 70
Q DEEP K+ R+E++L PEQ +L+ +V V VP ++ EW+L+G+TLSLSL L
Sbjct: 612 QDDEEPTAKRPRTEDALEPEQAWLASHPG-SVPIQVSVPMAPERSEWRLDGRTLSLSLPL 670
Query: 71 RTSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ LK+ + MP KQKL+ +
Sbjct: 671 AAPVSELKASLQRTTNMPTAKQKLYYE 697
>gi|312070680|ref|XP_003138258.1| splicing factor 3a [Loa loa]
gi|307766577|gb|EFO25811.1| splicing factor 3a [Loa loa]
Length = 796
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 16 PVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVT 75
P KK R+E+ L E V+L+K+ T ++T +V +P+ P+WKL+G+ LS+S+D+ V+
Sbjct: 683 PPAKKARTEDELESEDVWLTKV-TGSITVSVQIPSTAPNPDWKLDGRRLSVSMDIAAPVS 741
Query: 76 ALKSQIHDLIGMPAGKQKLHLD 97
LKS + D G+P KQKL +
Sbjct: 742 TLKSFVQDETGLPCSKQKLSYE 763
>gi|402593434|gb|EJW87361.1| hypothetical protein WUBG_01726 [Wuchereria bancrofti]
Length = 182
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 10 PQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLD 69
P D P KK R+E+ L E ++L+K+ T ++T V +P+ P+WKL+G+ LS+S+D
Sbjct: 63 PVGDGPPPAKKARTEDELESEALWLTKV-TGSITVTVQIPSTAPNPDWKLDGRRLSVSMD 121
Query: 70 LRTSVTALKSQIHDLIGMPAGKQKLHLD 97
+ V+ LKS + D G+P KQKL +
Sbjct: 122 IAAPVSTLKSFVQDETGLPCSKQKLSYE 149
>gi|170571837|ref|XP_001891885.1| Surp module family protein [Brugia malayi]
gi|158603357|gb|EDP39308.1| Surp module family protein [Brugia malayi]
Length = 821
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 10 PQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLD 69
P D P KK R+E+ L E ++L+K+ T ++T V +P+ P+WKL+G+ LS+S+D
Sbjct: 702 PVGDGPPPAKKARTEDDLESEALWLTKV-TGSITVTVQIPSTAPNPDWKLDGRRLSVSMD 760
Query: 70 LRTSVTALKSQIHDLIGMPAGKQKLHLD 97
+ V+ LKS + D G+P KQKL +
Sbjct: 761 IAAPVSTLKSFVQDETGLPCSKQKLSYE 788
>gi|440795695|gb|ELR16812.1| surp module domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 671
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Query: 6 PAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDK---PEWKLNGQ 62
PAP Q +EEP KK ++ SL+PE+ F++ P VT V VP ++K PEW +GQ
Sbjct: 543 PAPG-QEEEEPSLKKQKTGPSLVPEEEFIASHPGP-VTIKVTVPPASEKGAQPEWNFDGQ 600
Query: 63 TLSLSLDLRTSVTALKSQIHD-LIGMPAGKQKL 94
TL S+D + ++T LK+ + D L GMP KQKL
Sbjct: 601 TLEFSMDPKQTITDLKNLVRDQLGGMPPAKQKL 633
>gi|253723207|pdb|1ZKH|A Chain A, Solution Structure Of A Human Ubiquitin-Like Domain In
Sf3a1
Length = 86
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 42 VTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
V+ V VPNM DK EWKLNGQ L +L L V+ +K +IH+ GMPAGKQKL +
Sbjct: 2 VSIKVQVPNMQDKTEWKLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYE 57
>gi|321469365|gb|EFX80345.1| hypothetical protein DAPPUDRAFT_196815 [Daphnia pulex]
Length = 723
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 12 LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
++EEP K+ R+E+ L+PE+ FL + + F++ P +KPEW+L GQ LS SL
Sbjct: 606 MEEEPPSKRQRNEDQLMPEEAFLVRYPG-LLHFHIGAPVYAEKPEWRLQGQQLSFSLLPT 664
Query: 72 TSVTALKSQIHDLIGMPAGKQKLHLD 97
++ +K +I + GMP KQKL +
Sbjct: 665 EPISVVKQKISEATGMPPAKQKLFWE 690
>gi|390370570|ref|XP_791255.3| PREDICTED: splicing factor 3A subunit 1-like [Strongylocentrotus
purpuratus]
Length = 88
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 41/51 (80%)
Query: 44 FNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKL 94
FNVV P + DKPEWKL+GQ ++L++ L V+ +K+++H+ +G+PAGKQKL
Sbjct: 2 FNVVCPLVQDKPEWKLHGQRITLNMPLTDQVSVIKAKLHEQLGIPAGKQKL 52
>gi|339235389|ref|XP_003379249.1| splicing factor 3 subunit 1 [Trichinella spiralis]
gi|316978121|gb|EFV61141.1| splicing factor 3 subunit 1 [Trichinella spiralis]
Length = 739
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 24 EESLIPEQVFLSKMATPN-VTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQIH 82
EE L PE+ +L+K V VV P +KPEW LNGQ++S SL+L V+A+K +I
Sbjct: 632 EEQLKPEEEWLNKYGDLGPVNITVVFPLSAEKPEWNLNGQSVSYSLNLTDPVSAIKGKIQ 691
Query: 83 DLIGMPAGKQKLHLD 97
+ MPA KQKL +
Sbjct: 692 ETTSMPASKQKLSFE 706
>gi|324503216|gb|ADY41401.1| Splicing factor 3A subunit 1 [Ascaris suum]
Length = 799
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK R+EE L E +LSK+ ++ +V P+ T +WKL+G L++S+D+ V+ LK
Sbjct: 689 KKARTEEDLESESTWLSKVCG-SINVSVQTPSSTPNADWKLDGSVLNVSVDVAAPVSTLK 747
Query: 79 SQIHDLIGMPAGKQKLHLD 97
S + D+ G+P KQKL D
Sbjct: 748 SVVQDMTGLPCSKQKLVFD 766
>gi|324505110|gb|ADY42201.1| Splicing factor 3A subunit 1 [Ascaris suum]
Length = 823
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK R+EE L E +LSK+ ++ +V P+ T +WKL+G L++S+D+ V+ LK
Sbjct: 713 KKARTEEDLESESTWLSKVCG-SINVSVQTPSSTPNADWKLDGSVLNVSVDVAAPVSTLK 771
Query: 79 SQIHDLIGMPAGKQKLHLD 97
S + D+ G+P KQKL D
Sbjct: 772 SVVQDMTGLPCSKQKLVFD 790
>gi|47198435|emb|CAF88067.1| unnamed protein product [Tetraodon nigroviridis]
Length = 153
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 13 DEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRT 72
D+EP+ KK++SE++LIPE+ FL + P V V VPNM DK EWKL+GQ L+ ++ L
Sbjct: 26 DDEPLSKKMKSEDNLIPEEEFLRRNKGP-VAVKVQVPNMQDKSEWKLSGQVLNFTVPLTD 84
Query: 73 SV 74
V
Sbjct: 85 QV 86
>gi|313225031|emb|CBY20824.1| unnamed protein product [Oikopleura dioica]
gi|313246405|emb|CBY35316.1| unnamed protein product [Oikopleura dioica]
Length = 729
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALK 78
KK R E++LIPE+ FL T V F + VP + +K +WK GQ +S+++ L ++ +K
Sbjct: 620 KKARPEDNLIPEEDFLRTEPT-RVVFQISVPKV-EKDDWKCRGQLISVTMPLTSTFNEVK 677
Query: 79 SQIHDLIGMPAGKQKLHLD 97
++I + GMP KQKL ++
Sbjct: 678 AKIEEETGMPPQKQKLQVE 696
>gi|320168609|gb|EFW45508.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 720
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 8 PEPQLDEEPVGKKIRSEESLIP-EQVFLSKMATPNVTFNVVVPNMT-DKPEWKLNGQTLS 65
P+ +EEP K++R ++S+ P EQ F + P + V VPN+ DK W+ +GQ L
Sbjct: 596 PDRDANEEPDSKRVRMDDSIGPAEQHFAATHPGP-ILLQVQVPNLVGDKNGWQCSGQVLQ 654
Query: 66 LSLD-LRTSVTALKSQIHDLIGMPAGKQKLHL 96
L+LD + TS LKS I + MPA KQKL +
Sbjct: 655 LTLDSVLTSFVTLKSMIQEHTLMPAAKQKLQI 686
>gi|358055868|dbj|GAA98213.1| hypothetical protein E5Q_04896 [Mixia osmundae IAM 14324]
Length = 699
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 1 MGRKHPAPEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
G+ PA +P + + P K+ + + PE +L P +T +V +P + DKPEW +
Sbjct: 573 YGQIRPAVDPAVGQ-PDAKRRKMPGQVYPEAEWLRLHPEP-ITVSVQLPTLPDKPEWHCD 630
Query: 61 GQTLSLS-LDLRTSVTALKSQIHDLIGMPAGKQKLHL 96
G L LS + L L+ +I + IGMP G+QKL L
Sbjct: 631 GSVLQLSDIPLTLLAGTLRDRIQEKIGMPTGRQKLSL 667
>gi|312373917|gb|EFR21584.1| hypothetical protein AND_16807 [Anopheles darlingi]
Length = 825
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 51 MTDKPEWKLNGQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
MT+K +WKLNGQTLSL ++ +V+++K++I GMP KQK+ D
Sbjct: 1 MTEKNDWKLNGQTLSLVVNFTDTVSSVKAKIQTETGMPPAKQKIFYD 47
>gi|17535369|ref|NP_493746.1| Protein PRP-21 [Caenorhabditis elegans]
gi|498846|gb|AAA82164.1| similar to yeast pre-mRNA splicing factor PRP21, Swiss-Prot
Accession Number P32524; similar to D. melanogaster
suppressor-of-white-apricot, Swiss-Prot Accession Number
P12297; ubiquitin-like domain; putative splicing factor
[Caenorhabditis elegans]
gi|351050959|emb|CCD73645.1| Protein PRP-21 [Caenorhabditis elegans]
Length = 655
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 16 PVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVT 75
P K+ R+E+ LIPE +L K+ ++ NV +P PE ++G + ++ + ++
Sbjct: 545 PPAKRPRTEDDLIPEADWLKKVNGA-ISLNVHLPQA---PEHGMDGSIVQFTIQVTAPMS 600
Query: 76 ALKSQIHDLIGMPAGKQKLHLD 97
LK QI D GMP GKQKL D
Sbjct: 601 ELKQQIQDRYGMPVGKQKLMSD 622
>gi|384491423|gb|EIE82619.1| hypothetical protein RO3G_07324 [Rhizopus delemar RA 99-880]
Length = 574
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 19 KKIRSEESLIPEQVFLSKMATPN-VTFNVVVPNMTDKPEWKLNGQTLSLSLDL-RTSVTA 76
KK R+EE P + PN +T + P++ DKPEW L G +S++ L T ++
Sbjct: 471 KKPRTEEPEWP-------LTDPNAITLTIQTPSLPDKPEWNLTGAPISITGLLPNTLIST 523
Query: 77 LKSQIHDLIGMPAGKQKL 94
LK +I +GMPAGKQKL
Sbjct: 524 LKDRIASQLGMPAGKQKL 541
>gi|330802099|ref|XP_003289058.1| hypothetical protein DICPUDRAFT_153372 [Dictyostelium purpureum]
gi|325080892|gb|EGC34429.1| hypothetical protein DICPUDRAFT_153372 [Dictyostelium purpureum]
Length = 686
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 14 EEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTS 73
EEP KK++ +E+LIPEQ+FL P VT N+ P +T L++
Sbjct: 581 EEPNSKKVKKDENLIPEQIFLQANPGP-VTLNIESPE-----------KTFQLTVHPTDL 628
Query: 74 VTALKSQIHDLIGMPAGKQKLH 95
++ LK +I D+ GM KQKL
Sbjct: 629 ISTLKEKIKDINGMATNKQKLQ 650
>gi|281209823|gb|EFA83991.1| ubiquitin domain-containing protein [Polysphondylium pallidum
PN500]
Length = 667
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 14 EEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTS 73
+EP KK ++E+ LIPE ++ P V + N + N QT S++ + R +
Sbjct: 558 DEPTSKKQKTEDLLIPEDEYIRDNPGP-VQITIEATN-------EGNAQTFSITFNPRDT 609
Query: 74 VTALKSQIHDLIGMPAGKQKL 94
+T LK +I DLIG+ KQKL
Sbjct: 610 ITILKEKIKDLIGIAPNKQKL 630
>gi|301115160|ref|XP_002905309.1| splicing factor 3 subunit, putative [Phytophthora infestans T30-4]
gi|262110098|gb|EEY68150.1| splicing factor 3 subunit, putative [Phytophthora infestans T30-4]
Length = 628
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 13 DEEPVGKKIRSE-ESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
D EP K+ R+ SL+PE+ F S+ V V VPN D +WKL GQTL++ LD++
Sbjct: 546 DLEPAAKRQRTGGSSLMPEKEFASRHPG-MVRLIVKVPNDPDNAQWKLTGQTLTVELDVK 604
Query: 72 TSVTALKSQIHD---LIGMPA 89
++ LK ++ L+G P
Sbjct: 605 DNMRTLKQKLMVSVLLVGFPC 625
>gi|342319372|gb|EGU11321.1| Pre-mRNA splicing factor [Rhodotorula glutinis ATCC 204091]
Length = 728
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 15 EPVGKKIRSEES-LIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTS 73
EP K+ R + + PE+ +L+ P V V +P+ +KP W GQ + L + L
Sbjct: 617 EPSAKRARGTDGHIYPEEDWLATHPDP-VRIKVQLPDYPEKPAWGCKGQQVELEVPLTLL 675
Query: 74 VTALKSQIHDLIGMPAGKQKL 94
+ ++ +I L+G+P GKQ+
Sbjct: 676 IGTVRDRISGLVGVPVGKQRY 696
>gi|357130236|ref|XP_003566756.1| PREDICTED: probable splicing factor 3A subunit 1-like [Brachypodium
distachyon]
Length = 787
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 12 LDEEPVGKKIRSEE-SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-D 69
L +EP K+ R+++ SLIP + FL++ P +V VPN+ E L GQ L +++
Sbjct: 671 LPDEPEPKRQRTDDASLIPAEQFLAQHPGP-ARISVSVPNLD---EGNLRGQVLEINIQS 726
Query: 70 LRTSVTALKSQIHDLIGMPAGKQKLHLDVS 99
L +V +LK QI + +PA KQKL + S
Sbjct: 727 LSDTVGSLKEQIAGELQLPANKQKLSVRTS 756
>gi|219129991|ref|XP_002185159.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403338|gb|EEC43291.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 228
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 27 LIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQIH--DL 84
L+ E F++ ++ P VT + VPN + W GQ +SLS++++++V +K ++ +L
Sbjct: 122 LLSESDFVASLSKPEVTLQIRVPNDPTQMAWNFYGQIVSLSINVKSTVKVVKQEVSRVNL 181
Query: 85 IGMPAGKQKL 94
MPA K +L
Sbjct: 182 NNMPANKIQL 191
>gi|341897725|gb|EGT53660.1| hypothetical protein CAEBREN_31028 [Caenorhabditis brenneri]
Length = 637
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 16 PVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVT 75
P K+ R+EE L PE +L K++ ++V + PE ++G + ++ + ++
Sbjct: 527 PPAKRARTEEDLEPESEWLKKVSG---AIEIIV-QLPQAPENGMDGSLVQFTIQVTAPMS 582
Query: 76 ALKSQIHDLIGMPAGKQKLHLD 97
LK QI D GM GKQKL D
Sbjct: 583 ELKQQIQDRYGMAIGKQKLVSD 604
>gi|341896852|gb|EGT52787.1| CBN-PRP-21 protein [Caenorhabditis brenneri]
Length = 661
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 16 PVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVT 75
P K+ R+EE L PE +L K++ ++V + PE ++G + ++ + ++
Sbjct: 551 PPAKRARTEEDLEPESEWLKKVSG---AIEIIV-QLPQAPENGMDGSLVQFTIQVTAPMS 606
Query: 76 ALKSQIHDLIGMPAGKQKLHLD 97
LK QI D GM GKQKL D
Sbjct: 607 ELKQQIQDRYGMAIGKQKLVSD 628
>gi|227115864|ref|ZP_03829520.1| hypothetical protein PcarbP_23065 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 35
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 56 EWKLNGQTLSLSLDLRTSVTALKSQIHDLIGMPAG 90
EWKLNGQ L +L L V+ +K +IH+ GMPAG
Sbjct: 1 EWKLNGQVLVFTLPLSDQVSVIKVKIHEATGMPAG 35
>gi|348685333|gb|EGZ25148.1| hypothetical protein PHYSODRAFT_481939 [Phytophthora sojae]
Length = 687
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 13 DEEPVGKKIRSE-ESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLR 71
D EP K+ R+ SL+PE F + V V VPN D +WKL GQTL++ +D++
Sbjct: 550 DLEPAAKRQRTGGSSLLPENEFAIRHPGA-VRLVVKVPNDPDNAQWKLEGQTLNVEVDVK 608
Query: 72 TSVTALKSQI---------------------HDLIGMPAGKQKLHLDV 98
++ LK ++ DL MP KQ+L +
Sbjct: 609 DNMRTLKQKLMVSFLAVLQCSPPLTMLSILQADLQNMPVNKQQLKFSM 656
>gi|125538776|gb|EAY85171.1| hypothetical protein OsI_06527 [Oryza sativa Indica Group]
Length = 801
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 19 KKIRSEE-SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K++R+++ SLIP + FL++ P +V VPN+ E L GQ L + + L +V +
Sbjct: 692 KRLRTDDASLIPAEQFLAQHPGP-AHISVSVPNLD---EGNLRGQVLEIGVQSLSDTVGS 747
Query: 77 LKSQIHDLIGMPAGKQKLHLDVS 99
LK QI + +PA KQKL + S
Sbjct: 748 LKEQIAGELQLPANKQKLSVRTS 770
>gi|115445277|ref|NP_001046418.1| Os02g0245000 [Oryza sativa Japonica Group]
gi|50251803|dbj|BAD27734.1| putative splicing factor 3a [Oryza sativa Japonica Group]
gi|113535949|dbj|BAF08332.1| Os02g0245000 [Oryza sativa Japonica Group]
gi|125581463|gb|EAZ22394.1| hypothetical protein OsJ_06052 [Oryza sativa Japonica Group]
Length = 792
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 19 KKIRSEE-SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K++R+++ SLIP + FL++ P +V VPN+ E L GQ L + + L +V +
Sbjct: 683 KRLRTDDASLIPAEQFLAQHPGP-AHISVSVPNLD---EGNLRGQVLEIGVQSLSDTVGS 738
Query: 77 LKSQIHDLIGMPAGKQKLHLDVS 99
LK QI + +PA KQKL + S
Sbjct: 739 LKEQIAGELQLPANKQKLSVRTS 761
>gi|326534066|dbj|BAJ89383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 970
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 19 KKIRSEE-SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K+ R+++ SLIP + FL++ P +V VPN+ E L GQ L +S+ L ++ +
Sbjct: 861 KRQRTDDASLIPAEQFLAQHPGP-ARISVSVPNLD---EGNLRGQVLEISVQSLSDTIGS 916
Query: 77 LKSQIHDLIGMPAGKQKLHLDVS 99
LK Q+ + +PA KQKL + S
Sbjct: 917 LKEQVAGELQLPANKQKLSVRTS 939
>gi|356556316|ref|XP_003546472.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
Length = 802
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLS-LDLRTSVTALKSQIH 82
+ +LIPE FL++ P V +V VPN+ E L GQ L ++ L L +V +LK +I
Sbjct: 699 DSALIPEDQFLAQHPGP-VRISVSVPNVD---EGNLKGQVLEITVLSLSETVGSLKEKIA 754
Query: 83 DLIGMPAGKQKL 94
I +PA KQKL
Sbjct: 755 GEIQLPANKQKL 766
>gi|293336110|ref|NP_001169587.1| uncharacterized protein LOC100383468 [Zea mays]
gi|224030229|gb|ACN34190.1| unknown [Zea mays]
gi|414876931|tpg|DAA54062.1| TPA: hypothetical protein ZEAMMB73_550316 [Zea mays]
gi|414876932|tpg|DAA54063.1| TPA: hypothetical protein ZEAMMB73_550316 [Zea mays]
gi|414876933|tpg|DAA54064.1| TPA: hypothetical protein ZEAMMB73_550316 [Zea mays]
Length = 807
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 19 KKIRSEE-SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K+ R+++ SLIP + FL++ P + +V VPN+ E L GQ L + + L +V +
Sbjct: 698 KRQRTDDGSLIPAEQFLAQHQGP-ASISVSVPNLD---EGNLRGQVLQIPVQSLSDTVGS 753
Query: 77 LKSQIHDLIGMPAGKQKLHLDVS 99
LK QI + +PA KQKL + S
Sbjct: 754 LKEQIAGELQLPANKQKLSVRTS 776
>gi|326511295|dbj|BAJ87661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 791
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 19 KKIRSEE-SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K+ R+++ SLIP + FL++ P +V VPN+ E L GQ L +S+ L ++ +
Sbjct: 682 KRQRTDDASLIPAEQFLAQHPGP-ARISVSVPNLD---EGNLRGQVLEISVQSLSDTIGS 737
Query: 77 LKSQIHDLIGMPAGKQKLHLDVS 99
LK Q+ + +PA KQKL + S
Sbjct: 738 LKEQVAGELQLPANKQKLSVRTS 760
>gi|302799290|ref|XP_002981404.1| hypothetical protein SELMODRAFT_114587 [Selaginella moellendorffii]
gi|300150944|gb|EFJ17592.1| hypothetical protein SELMODRAFT_114587 [Selaginella moellendorffii]
Length = 766
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 19 KKIRSEESL-IPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K++R E+SL IPE F + P + +V VP T + E L GQ L L++ + ++ +
Sbjct: 655 KRLRLEDSLLIPEHQFAFQYPGP-IPVSVAVP--TVEGEGSLKGQVLQLTMPSVSETIAS 711
Query: 77 LKSQIHDLIGMPAGKQKL 94
LK +I IG+PA KQKL
Sbjct: 712 LKEKIAAEIGLPANKQKL 729
>gi|302773027|ref|XP_002969931.1| hypothetical protein SELMODRAFT_146605 [Selaginella moellendorffii]
gi|300162442|gb|EFJ29055.1| hypothetical protein SELMODRAFT_146605 [Selaginella moellendorffii]
Length = 735
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 19 KKIRSEESL-IPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K++R E+SL IPE F + P + +V VP T + E L GQ L L++ + ++ +
Sbjct: 624 KRLRLEDSLLIPEHQFAFQYPGP-IPVSVAVP--TVEGEGSLKGQVLQLTMPSVSETIAS 680
Query: 77 LKSQIHDLIGMPAGKQKL 94
LK +I IG+PA KQKL
Sbjct: 681 LKEKIAAEIGLPANKQKL 698
>gi|223994665|ref|XP_002287016.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978331|gb|EED96657.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 764
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 IPEQVFLSKMATP-NVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQIHD-LI 85
+PE F++ + P V F V +P W NGQT+ LS T+V +K+ + + L
Sbjct: 659 LPEAEFIATLENPAEVAFCVRIPYDASNAGWNFNGQTIDLSPGATTTVKEVKAMLKEQLG 718
Query: 86 GMPAGKQKL 94
GMP K +L
Sbjct: 719 GMPINKMQL 727
>gi|111226977|ref|XP_001134622.1| ubiquitin domain-containing protein [Dictyostelium discoideum AX4]
gi|74860368|sp|Q86A14.1|SF3A1_DICDI RecName: Full=Probable splicing factor 3A subunit 1
gi|90971296|gb|EAS66956.1| ubiquitin domain-containing protein [Dictyostelium discoideum AX4]
Length = 760
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 14 EEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTS 73
EEP KK++ ++ LIPE V+L P N+ V M DK ++L S
Sbjct: 653 EEPQSKKLKIDDVLIPESVWLQNNPNP---VNLTV-EMADK------SNIYQITLQPTDS 702
Query: 74 VTALKSQIHDLIGMPAGKQKLH 95
++ LK +I +L GMP KQKL
Sbjct: 703 ISLLKEKIKELNGMPTNKQKLQ 724
>gi|397642741|gb|EJK75425.1| hypothetical protein THAOC_02849 [Thalassiosira oceanica]
Length = 728
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 28 IPEQVFLSKMATPN-VTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQIHDLI- 85
+ E F++ ++TP+ + F V +P+ W LNGQT+ L++ + LK +I + +
Sbjct: 623 LSEAAFIATLSTPDELPFCVRIPHDPSSASWNLNGQTIDLTMAATCKIKELKEKIREELG 682
Query: 86 -GMPAGKQKL 94
GMP K ++
Sbjct: 683 GGMPTNKMQI 692
>gi|392577784|gb|EIW70913.1| hypothetical protein TREMEDRAFT_73600 [Tremella mesenterica DSM
1558]
Length = 785
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 42 VTFNVVVPNMTDKPEWKLNGQTLSLS-LDLRTSVTALKSQIHDLIGMPAGKQKLHLDV 98
++ ++ +PNM +KPEWKLNG +++S L + T V+ L+ +I + +L LD
Sbjct: 699 ISLSIQLPNMPEKPEWKLNGSIITISDLSVSTLVSTLRERIKRTVDAELPISRLKLDY 756
>gi|356575640|ref|XP_003555946.1| PREDICTED: probable splicing factor 3A subunit 1-like isoform 1
[Glycine max]
gi|356575642|ref|XP_003555947.1| PREDICTED: probable splicing factor 3A subunit 1-like isoform 2
[Glycine max]
Length = 798
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIH 82
+ +LIPE FL++ P V +V VPN+ E L GQ L +++ L +V +LK +I
Sbjct: 695 DSALIPEDQFLAQHPGP-VRISVSVPNVD---EGNLKGQVLEITVQSLSETVGSLKEKIA 750
Query: 83 DLIGMPAGKQKL 94
I +PA KQKL
Sbjct: 751 GEIQLPANKQKL 762
>gi|325192378|emb|CCA26819.1| splicing factor 3 subunit putative [Albugo laibachii Nc14]
Length = 868
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 27 LIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQIHDLIG 86
+PE F + + + +V VPN WKL GQ+L++ +D++ S+ LK ++ + +
Sbjct: 767 FLPEDEF-AALHPGALMISVRVPNDPGCDMWKLQGQSLNVEVDIKDSIRTLKEKLMEQLE 825
Query: 87 MPAGKQKLHLDV 98
MP KQ+L V
Sbjct: 826 MPINKQQLKTAV 837
>gi|356532273|ref|XP_003534698.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
Length = 806
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIH 82
+ +LIPE FL++ P V +V VPN+ E L GQ L +++ L +V +LK +I
Sbjct: 703 DSALIPEDQFLAQHPGP-VRISVSVPNVD---EGNLKGQVLEITVQSLSETVGSLKEKIA 758
Query: 83 DLIGMPAGKQKL 94
I +PA KQKL
Sbjct: 759 GEIQLPANKQKL 770
>gi|255575206|ref|XP_002528507.1| spliceosome associated protein, putative [Ricinus communis]
gi|223532067|gb|EEF33876.1| spliceosome associated protein, putative [Ricinus communis]
Length = 816
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 19 KKIRSEES-LIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K+ R ++S LIPE FL++ P V V VPN+ E L GQ L +++ L +V +
Sbjct: 707 KRQRLDDSMLIPEDQFLAQHPGP-VRITVSVPNVD---EGNLKGQVLEITVQSLSENVAS 762
Query: 77 LKSQIHDLIGMPAGKQKL 94
LK +I I +PA KQKL
Sbjct: 763 LKEKIAGEIQLPANKQKL 780
>gi|242052539|ref|XP_002455415.1| hypothetical protein SORBIDRAFT_03g010420 [Sorghum bicolor]
gi|241927390|gb|EES00535.1| hypothetical protein SORBIDRAFT_03g010420 [Sorghum bicolor]
Length = 803
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 19 KKIRSEE-SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K+ R+++ SLIP + FL++ P + +V VPN+ E L GQ L + + L +V +
Sbjct: 694 KRPRTDDASLIPVEQFLAQHPGP-ASISVSVPNLD---EGNLRGQVLQIPVQSLSDTVGS 749
Query: 77 LKSQIHDLIGMPAGKQKLHLDVS 99
LK QI + +PA KQKL + S
Sbjct: 750 LKEQIAGELQLPANKQKLSVRTS 772
>gi|118481265|gb|ABK92580.1| unknown [Populus trichocarpa]
Length = 287
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIH 82
+ +L+PE FL++ P V V VPN+ E L GQ L + + L +V +LK +I
Sbjct: 184 DSALVPEDQFLAQHLGP-VRITVAVPNLD---EGNLKGQVLEIMMQSLSETVGSLKEKIA 239
Query: 83 DLIGMPAGKQKL 94
I +PA KQKL
Sbjct: 240 GEIQLPANKQKL 251
>gi|356536202|ref|XP_003536628.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
Length = 801
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIH 82
+ +LIPE FL++ P V V VPN+ E L GQ L +++ L +V +LK +I
Sbjct: 698 DSALIPEDQFLAQHPGP-VCICVSVPNVD---EGNLKGQVLEITVQSLSETVGSLKEKIA 753
Query: 83 DLIGMPAGKQKL 94
I +PA KQKL
Sbjct: 754 GEIQLPANKQKL 765
>gi|449490073|ref|XP_004158500.1| PREDICTED: LOW QUALITY PROTEIN: probable splicing factor 3A subunit
1-like [Cucumis sativus]
Length = 809
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 27 LIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIHDLI 85
L+PE FL++ P V V VPN+ D L GQ L +++ L +V +LK +I I
Sbjct: 709 LMPEDQFLAQHPGP-VRITVSVPNLDD---GNLKGQVLEITVQSLTETVGSLKEKIAGEI 764
Query: 86 GMPAGKQKL 94
+PA KQKL
Sbjct: 765 QLPANKQKL 773
>gi|449441726|ref|XP_004138633.1| PREDICTED: probable splicing factor 3A subunit 1-like [Cucumis
sativus]
Length = 809
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 27 LIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIHDLI 85
L+PE FL++ P V V VPN+ D L GQ L +++ L +V +LK +I I
Sbjct: 709 LMPEDQFLAQHPGP-VRITVSVPNLDD---GNLKGQVLEITVQSLTETVGSLKEKIAGEI 764
Query: 86 GMPAGKQKL 94
+PA KQKL
Sbjct: 765 QLPANKQKL 773
>gi|147836211|emb|CAN75427.1| hypothetical protein VITISV_003301 [Vitis vinifera]
Length = 792
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 19 KKIRSEESL-IPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K+ R ++SL IPE FL++ P V V VPN+ E L GQ L +++ L +V +
Sbjct: 683 KRQRLDDSLLIPEDQFLAQHPGP-VRITVSVPNVD---EGNLKGQLLEITVQSLSETVGS 738
Query: 77 LKSQIHDLIGMPAGKQKL 94
LK +I + +PA KQKL
Sbjct: 739 LKEKIAGEVQLPANKQKL 756
>gi|225423737|ref|XP_002278479.1| PREDICTED: probable splicing factor 3A subunit 1-like [Vitis
vinifera]
Length = 814
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 19 KKIRSEESL-IPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K+ R ++SL IPE FL++ P V V VPN+ E L GQ L +++ L +V +
Sbjct: 705 KRQRLDDSLLIPEDQFLAQHPGP-VRITVSVPNVD---EGNLKGQLLEITVQSLSETVGS 760
Query: 77 LKSQIHDLIGMPAGKQKL 94
LK +I + +PA KQKL
Sbjct: 761 LKEKIAGEVQLPANKQKL 778
>gi|357521457|ref|XP_003631017.1| hypothetical protein MTR_8g106170 [Medicago truncatula]
gi|355525039|gb|AET05493.1| hypothetical protein MTR_8g106170 [Medicago truncatula]
Length = 804
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIH 82
+ +LIPE FL++ P ++ VPN+ E L GQ L +++ L +V +LK +I
Sbjct: 701 DSALIPEDKFLAQHPGP-ARISISVPNVD---EGNLKGQVLEITVQSLSETVGSLKEKIA 756
Query: 83 DLIGMPAGKQKL 94
I +PA KQKL
Sbjct: 757 GEIQLPANKQKL 768
>gi|328865383|gb|EGG13769.1| ubiquitin domain-containing protein [Dictyostelium fasciculatum]
Length = 673
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 18 GKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTAL 77
KK++++++LI E+ F+ A P V+ +D + Q SL L R ++T L
Sbjct: 542 NKKLKTDDNLINEEEFI--FANPGPVSLVIESTGSDG-----SNQNYSLVLQPRDTITTL 594
Query: 78 KSQIHDLIGMPAGKQKL 94
K +I DL+G+ KQKL
Sbjct: 595 KDRIKDLVGLAPNKQKL 611
>gi|413946962|gb|AFW79611.1| hypothetical protein ZEAMMB73_491828 [Zea mays]
Length = 806
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 19 KKIRSEE-SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K+ R+++ SLIP + +L + P + +V VPN+ E L GQ L + + L +V +
Sbjct: 697 KRQRTDDASLIPAEQYLVQHPGP-ASISVSVPNLD---EGNLRGQILQIPVQSLSDTVGS 752
Query: 77 LKSQIHDLIGMPAGKQKLHLDVS 99
LK QI + +PA KQKL + S
Sbjct: 753 LKEQIAGELQLPANKQKLSVRTS 775
>gi|297737950|emb|CBI27151.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 19 KKIRSEESL-IPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTA 76
K+ R ++SL IPE FL++ P V V VPN+ E L GQ L +++ L +V +
Sbjct: 336 KRQRLDDSLLIPEDQFLAQHPGP-VRITVSVPNVD---EGNLKGQLLEITVQSLSETVGS 391
Query: 77 LKSQIHDLIGMPAGKQKL 94
LK +I + +PA KQKL
Sbjct: 392 LKEKIAGEVQLPANKQKL 409
>gi|167530875|ref|XP_001748159.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773279|gb|EDQ86920.1| predicted protein [Monosiga brevicollis MX1]
Length = 762
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 4 KHPAPEPQLDEEPVGKKIRSE---ESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
+ P P ++ EP KK +++ +L+PE+ FL + + NVT V +
Sbjct: 641 EEPQPAAEVTSEPPAKKTKADTVLSTLVPEEEFL-QTHSGNVTVTVQADDEA------AE 693
Query: 61 GQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHL 96
G++ S++L +V LKS++ + G+ KQKL L
Sbjct: 694 GRSFSVTLPYTATVGDLKSELQTMSGLAKNKQKLTL 729
>gi|353237888|emb|CCA69850.1| related to Splicing factor 3 subunit 1 [Piriformospora indica DSM
11827]
Length = 744
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 27 LIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSL-SLDLRTSVTALKSQIHDLI 85
L PE +LS P +T +V +P DKPEWKL+G +++ + L V+ L+ ++ +
Sbjct: 641 LYPEDTWLSYHQDP-ITIHVRLPLHADKPEWKLDGSVVAIPDVSLSAIVSTLRDKLIAQL 699
Query: 86 G--MPAGKQKLHL 96
G +P + KL +
Sbjct: 700 GSKVPVSRIKLSM 712
>gi|443925977|gb|ELU44728.1| pre-mRNA splicing factor [Rhizoctonia solani AG-1 IA]
Length = 472
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 42 VTFNVVVPNMTDKPEWKLNGQTLSL-SLDLRTSVTALKSQIHDLIGMPAGKQKLHLDVS 99
V+ NV +PN + PEWK+NGQ +++ L L ++ L+ ++ ++G G + +
Sbjct: 385 VSINVQLPNHPENPEWKMNGQVVTVPDLPLTLLISTLRDRVQHIVGSSLGASWMRFSYN 443
>gi|224081399|ref|XP_002306395.1| predicted protein [Populus trichocarpa]
gi|222855844|gb|EEE93391.1| predicted protein [Populus trichocarpa]
Length = 776
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIH 82
+ +L+PE FL++ V V VPN+ E L GQ L +++ L +V +LK +I
Sbjct: 673 DSALVPEDQFLAQHPG-LVRVTVAVPNID---EGNLKGQVLEITMQSLSETVGSLKEKIA 728
Query: 83 DLIGMPAGKQKL 94
I +PA KQKL
Sbjct: 729 GEIQLPANKQKL 740
>gi|428169651|gb|EKX38583.1| hypothetical protein GUITHDRAFT_77115 [Guillardia theta CCMP2712]
Length = 120
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 19 KKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSL-SLDLRTSVTAL 77
K+ ++E +L PE + + P +T V+VP ++ NGQT+ L S+ ++ L
Sbjct: 8 KRAKAEANLYPEHTWAANHPNP-ITVKVLVPKEEVNSKFNFNGQTVMLNSIATNCTIKDL 66
Query: 78 KSQIHDLI-GMPAGKQKL 94
K ++ + G+PA K KL
Sbjct: 67 KDKLTSYLGGLPANKMKL 84
>gi|395333287|gb|EJF65664.1| hypothetical protein DICSQDRAFT_131884 [Dichomitus squalens
LYAD-421 SS1]
Length = 787
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 26 SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSL-SLDLRTSVTALKSQIHDL 84
+L PEQ +++ P ++ V +PN +PEWK +G ++L L L V+ L+ +I
Sbjct: 682 ALYPEQDWINMHPHP-ISLRVQLPNEPSRPEWKFDGSVVTLQELPLSLLVSTLRDRIVQA 740
Query: 85 IGMPAGKQKLHL 96
G G K+ +
Sbjct: 741 TGSTVGVSKIRV 752
>gi|169853869|ref|XP_001833612.1| pre-mRNA splicing factor [Coprinopsis cinerea okayama7#130]
gi|116505262|gb|EAU88157.1| pre-mRNA splicing factor [Coprinopsis cinerea okayama7#130]
Length = 760
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 26 SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSL-SLDLRTSVTALKSQI 81
+L PE+ +++ P ++ V +PN KPEWKL+G T++L L L V+ L+ +I
Sbjct: 655 ALYPEEDWIAMHPHP-ISLRVQLPNEPSKPEWKLDGSTITLPELPLNLLVSTLRDRI 710
>gi|297851872|ref|XP_002893817.1| swap (Suppressor-of-White-APricot)/surp domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
gi|297339659|gb|EFH70076.1| swap (Suppressor-of-White-APricot)/surp domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 778
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIH 82
E +L+PE FL++ P T V +PN+ D GQ + +++ L +V +LK +I
Sbjct: 679 ESALVPEDQFLAQHPGP-ATIRVSMPNVDD-------GQVIEITVQSLSENVGSLKEKIA 730
Query: 83 DLIGMPAGKQKL 94
I +PA KQK+
Sbjct: 731 GEIQIPANKQKI 742
>gi|449547647|gb|EMD38615.1| hypothetical protein CERSUDRAFT_82892 [Ceriporiopsis subvermispora
B]
Length = 784
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 26 SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSL-SLDLRTSVTALKSQI 81
+L PEQ ++S P ++ V +PN KPEWKL+G +++ L L V+ L+ +I
Sbjct: 681 ALYPEQEWISMHPHP-ISLRVQLPNEPSKPEWKLDGGVITIQDLPLNLLVSTLRDRI 736
>gi|301109551|ref|XP_002903856.1| ubiquitin, putative [Phytophthora infestans T30-4]
gi|262096859|gb|EEY54911.1| ubiquitin, putative [Phytophthora infestans T30-4]
Length = 657
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 22 RSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQI 81
R +++IP+ S F +P D L G+ + LS+ + +V LK QI
Sbjct: 73 RELDAVIPDLTSSSARLVARTRF---IPRFVDVTVKTLTGKCMFLSVPVNYTVGELKKQI 129
Query: 82 HDLIGMPAGKQKLHLD 97
+D G+P +Q+L LD
Sbjct: 130 YDREGIPPDQQRLVLD 145
>gi|401881364|gb|EJT45664.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 2479]
Length = 705
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 7 APEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSL 66
AP+P+L + V K + L E ++S P + V +P+M DKPEWKL+G+T+ +
Sbjct: 587 APQPRLKKSRVDKLPNGQ--LYSEIDWMSLHPEP-IALQVQLPSMADKPEWKLDGRTIIV 643
Query: 67 -SLDLRTSVTALKSQIHDLIGMPAGKQKLHLDVS 99
L + + L+ +I + +L LD +
Sbjct: 644 PDLPVNLTFGNLRDRIKRAVDADLPVSRLRLDYN 677
>gi|406701700|gb|EKD04814.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 705
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 7 APEPQLDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSL 66
AP+P+L + V K + L E ++S P + V +P+M DKPEWKL+G+T+ +
Sbjct: 587 APQPRLKKSRVDKLPNGQ--LYSEIDWMSLHPEP-IALQVQLPSMADKPEWKLDGRTIIV 643
Query: 67 -SLDLRTSVTALKSQIHDLIGMPAGKQKLHLDVS 99
L + + L+ +I + +L LD +
Sbjct: 644 PDLPVNLTFGNLRDRIKRAVDADLPVSRLRLDYN 677
>gi|302692528|ref|XP_003035943.1| hypothetical protein SCHCODRAFT_65782 [Schizophyllum commune H4-8]
gi|300109639|gb|EFJ01041.1| hypothetical protein SCHCODRAFT_65782 [Schizophyllum commune H4-8]
Length = 757
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 LIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLS-LDLRTSVTALKSQIHDLI 85
L PE +++ P ++ V +P KPEWKL+G T++LS L L V+ L+ +I
Sbjct: 654 LYPEADWIAMHPYP-ISLQVQLPKDDTKPEWKLDGTTVTLSELPLNLLVSTLRDRILQAT 712
Query: 86 GMPAGKQKLHL 96
G A ++ L
Sbjct: 713 GSAAPVSRIRL 723
>gi|328863624|gb|EGG12723.1| hypothetical protein MELLADRAFT_114885 [Melampsora larici-populina
98AG31]
Length = 964
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 12 LDEEPVGKKIRSEESL----IPEQVFLSK----MATPNVTFNVVVPNMTDKPEWKLNGQT 63
L+ +P K+++ E L + Q+F + M + + +P DKPEW +G
Sbjct: 839 LEGQPGAKRVKVGEELPVVAVAPQLFTEEQWIEMHPDPIQILIKLPVYEDKPEWGCDGSE 898
Query: 64 LSLS-LDLRTSVTALKSQIHDLIGMPAGKQKLHL 96
++L + + V L+ ++ +L G+P G+Q+L L
Sbjct: 899 ITLDEIPITLLVGVLRDKLLNLKGIPVGRQQLRL 932
>gi|15223846|ref|NP_172917.1| splicing factor 3A subunit 1 [Arabidopsis thaliana]
gi|186478492|ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana]
gi|148887433|sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1
gi|110740977|dbj|BAE98583.1| putative splicing factor [Arabidopsis thaliana]
gi|332191075|gb|AEE29196.1| splicing factor 3A subunit 1 [Arabidopsis thaliana]
gi|332191076|gb|AEE29197.1| splicing factor 3A subunit 1 [Arabidopsis thaliana]
Length = 785
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIH 82
E +L+PE FL++ P T V PN D GQ + +++ L +V +LK +I
Sbjct: 686 ESALVPEDQFLAQHPGP-ATIRVSKPNEND-------GQFMEITVQSLSENVGSLKEKIA 737
Query: 83 DLIGMPAGKQKL 94
I +PA KQKL
Sbjct: 738 GEIQIPANKQKL 749
>gi|19698893|gb|AAL91182.1| splicing factor, putative [Arabidopsis thaliana]
Length = 785
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIH 82
E +L+PE FL++ P T V PN D GQ + +++ L +V +LK +I
Sbjct: 686 ESALVPEDQFLAQHPGP-ATIRVSKPNEND-------GQFMEITVQSLSENVGSLKEKIA 737
Query: 83 DLIGMPAGKQKL 94
I +PA KQKL
Sbjct: 738 GEIQIPANKQKL 749
>gi|168040776|ref|XP_001772869.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675780|gb|EDQ62271.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 757
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLS-LDLRTSVTALKSQIH 82
E SL+PE FL++ V +V VP + + E L GQTL L+ L L S+ +LK +I
Sbjct: 654 EISLLPEDQFLAQHPGA-VRISVSVPIV--EGEANLKGQTLELTVLSLSESIKSLKERIA 710
Query: 83 DLIGMPAGKQKL 94
+ + A KQKL
Sbjct: 711 GEVQLAANKQKL 722
>gi|7527720|gb|AAF63169.1|AC010657_5 T5E21.13 [Arabidopsis thaliana]
Length = 1776
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIH 82
E +L+PE FL++ P T V PN D GQ + +++ L +V +LK +I
Sbjct: 1677 ESALVPEDQFLAQHPGP-ATIRVSKPNEND-------GQFMEITVQSLSENVGSLKEKIA 1728
Query: 83 DLIGMPAGKQKL 94
I +PA KQKL
Sbjct: 1729 GEIQIPANKQKL 1740
>gi|167999075|ref|XP_001752243.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696638|gb|EDQ82976.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 793
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 27 LIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLS-LDLRTSVTALKSQIHDLI 85
L+PE FL++ V V VP + E GQTL L+ L L S+ +LK +I +
Sbjct: 693 LLPEDQFLAQHPG-AVRIRVSVPMVEG--ESNFRGQTLELTVLSLSESIKSLKERIAGEV 749
Query: 86 GMPAGKQKL 94
+PA KQKL
Sbjct: 750 QLPANKQKL 758
>gi|336367656|gb|EGN96000.1| hypothetical protein SERLA73DRAFT_93926 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380370|gb|EGO21523.1| hypothetical protein SERLADRAFT_451556 [Serpula lacrymans var.
lacrymans S7.9]
Length = 782
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 26 SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSL-SLDLRTSVTALKSQIHDL 84
++ PE ++S M ++ V +PN KPEWKL+G T+++ L L V L+ +I +
Sbjct: 678 AVYPEADWIS-MHPYTISLFVQLPNDPSKPEWKLDGTTVTIPDLPLNLLVATLRDRIIQV 736
Query: 85 --IGMPAGKQKL 94
G+PA + +L
Sbjct: 737 TQTGLPASRIRL 748
>gi|308469858|ref|XP_003097165.1| CRE-PRP-21 protein [Caenorhabditis remanei]
gi|308240506|gb|EFO84458.1| CRE-PRP-21 protein [Caenorhabditis remanei]
Length = 663
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 16 PVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVT 75
P K+ R+EE L PE+ +L K+ N T ++V + PE ++G + S+ + ++
Sbjct: 553 PPAKRARTEEDLEPEEEWLKKV---NGTIELIV-QLPQAPENGMDGSFVQFSVQVTAPMS 608
Query: 76 ALKSQIHDLIGMPAGKQKL 94
LK QI D GM GKQKL
Sbjct: 609 ELKQQIQDRYGMGIGKQKL 627
>gi|170093980|ref|XP_001878211.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646665|gb|EDR10910.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 769
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 9 EPQLDEEPVGKKIRSEE----SLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTL 64
E +DE P K+ R + +L PE+ +++ P ++ V +PN KPEWKL+G+ +
Sbjct: 631 EGGVDELPPAKRQRVAKLPGGNLYPEEDWVAMHPYP-ISLLVQLPNDPTKPEWKLDGKIV 689
Query: 65 SL-SLDLRTSVTALKSQI--HDLIGMPAGKQKL 94
S+ L L V+ L+ +I H +PA + ++
Sbjct: 690 SIPDLPLNLLVSTLRDRILQHTDSSVPASRIRI 722
>gi|159163267|pdb|1WE6|A Chain A, Solution Structure Of Ubiquitin-Like Domain In Splicing
Factor Aal91182
Length = 111
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSLDLRTSVTALKSQIHD 83
E +L+PE FL++ P T V PN D ++ Q+LS +V +LK +I
Sbjct: 11 ESALVPEDQFLAQHPGP-ATIRVSKPNENDGQFMEITVQSLS------ENVGSLKEKIAG 63
Query: 84 LIGMPAGKQKL 94
I +PA KQKL
Sbjct: 64 EIQIPANKQKL 74
>gi|452820762|gb|EME27800.1| splicing factor 3A subunit 1 [Galdieria sulphuraria]
Length = 592
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 56 EWKLNGQTLSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHLD 97
EW L GQT+SL + + ++ LKS + L+ + KQK+ D
Sbjct: 517 EWNLRGQTISLQVPYQATLLDLKSTLAPLVKLAPNKQKISAD 558
>gi|297844372|ref|XP_002890067.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335909|gb|EFH66326.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 778
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 24 EESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQTLSLSL-DLRTSVTALKSQIH 82
E +L+PE FL++ P T V PN D GQ + +++ L +V +LK +I
Sbjct: 679 ESALVPEDQFLAQHPGP-ATIRVSKPNEND-------GQVMEITVQSLSENVGSLKEKIA 730
Query: 83 DLIGMPAGKQKL 94
+ +PA KQKL
Sbjct: 731 GEMQIPANKQKL 742
>gi|403159806|ref|XP_003320374.2| hypothetical protein PGTG_01286 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168251|gb|EFP75955.2| hypothetical protein PGTG_01286 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 958
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 42 VTFNVVVPNMTDKPEWKLNGQTLSL-SLDLRTSVTALKSQIHDLIGMPAGKQKL 94
++ + +P DKPEW +G + L L + V L+ ++ +L G+P G+Q++
Sbjct: 871 ISLLIKLPEYPDKPEWGCDGSEIVLEELPITLLVGVLRDKLSNLKGIPVGRQQI 924
>gi|392595929|gb|EIW85252.1| hypothetical protein CONPUDRAFT_117951 [Coniophora puteana
RWD-64-598 SS2]
Length = 774
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 12/97 (12%)
Query: 2 GRKHPAPEPQ-LDEEPVGKKIRSEESLIPEQVFLSKMATPNVTFNVVVPNMTDKPEWKLN 60
G++ PAP+ Q + + P G ++ PE +++ M ++ +V +P+ KPEWKL+
Sbjct: 653 GQEQPAPKRQKIAKLPGG-------AVYPEADWIA-MHPYTISLHVQLPSDPSKPEWKLD 704
Query: 61 GQTLSLS-LDLRTSVTALKSQIHDLIG--MPAGKQKL 94
G+ +++S L L V+ L+ +I G MP + +L
Sbjct: 705 GKVVTVSDLPLNLLVSTLRERITQASGSQMPVSRIRL 741
>gi|322390230|ref|ZP_08063761.1| para-aminobenzoate synthase [Streptococcus parasanguinis ATCC 903]
gi|321143092|gb|EFX38539.1| para-aminobenzoate synthase [Streptococcus parasanguinis ATCC 903]
Length = 575
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 5 HPAPEPQLDEEPVGKKIRSEESLIPE-QVFLSKMATPNVTFNVVVPNMTDKPEWKLNGQT 63
+P EP+L +E + R E +L ++ L K N TF++V+ +TD P L Q
Sbjct: 407 YPYDEPKLLKELQEELARLESNLDYRCRIALHK----NGTFHLVITELTDLPASYLQAQL 462
Query: 64 LSLSLDLRTSVTALKSQIHDLIGMPAGKQKLHL 96
LDL T T K+ D + +Q HL
Sbjct: 463 TEQKLDLATPFTYFKTSQRDHLSQSNHEQIFHL 495
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,607,221,406
Number of Sequences: 23463169
Number of extensions: 56915116
Number of successful extensions: 112387
Number of sequences better than 100.0: 227
Number of HSP's better than 100.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 111988
Number of HSP's gapped (non-prelim): 310
length of query: 99
length of database: 8,064,228,071
effective HSP length: 68
effective length of query: 31
effective length of database: 6,468,732,579
effective search space: 200530709949
effective search space used: 200530709949
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)