Query psy1006
Match_columns 239
No_of_seqs 227 out of 2047
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 16:52:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1006.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1006hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 1.1E-28 3.9E-33 222.4 18.7 150 81-230 28-182 (510)
2 1u19_A Rhodopsin; G protein-co 100.0 1.1E-27 3.8E-32 204.2 20.9 149 81-230 34-182 (349)
3 3uon_A Human M2 muscarinic ace 99.9 5.9E-27 2E-31 207.3 17.9 154 85-238 23-177 (467)
4 2ks9_A Substance-P receptor; w 99.9 6.8E-26 2.3E-30 194.6 22.2 141 81-223 28-168 (364)
5 2rh1_A Beta-2-adrenergic recep 99.9 1.9E-26 6.6E-31 207.1 18.9 144 83-226 38-182 (500)
6 2lnl_A C-X-C chemokine recepto 99.9 6.1E-26 2.1E-30 190.1 19.7 144 84-230 10-153 (296)
7 3vw7_A Proteinase-activated re 99.9 1.7E-26 5.8E-31 205.4 16.5 155 82-237 17-172 (484)
8 3v2y_A Sphingosine 1-phosphate 99.9 5.6E-26 1.9E-30 205.2 17.8 143 83-227 61-203 (520)
9 3odu_A C-X-C chemokine recepto 99.9 4E-26 1.4E-30 203.9 16.3 152 82-237 45-196 (502)
10 4dkl_A MU-type opioid receptor 99.9 4.9E-26 1.7E-30 201.0 16.7 145 83-228 15-159 (464)
11 2z73_A Rhodopsin; visual pigme 99.9 1.7E-25 5.7E-30 197.9 19.2 155 82-237 31-186 (448)
12 3pbl_A D(3) dopamine receptor, 99.9 6.6E-26 2.2E-30 201.5 16.2 142 86-227 39-184 (481)
13 3eml_A Human adenosine A2A rec 99.9 8.3E-26 2.8E-30 200.8 16.6 142 86-229 22-163 (488)
14 4ea3_A Fusion protein of nocic 99.9 2.2E-25 7.5E-30 196.7 18.9 145 81-226 121-265 (434)
15 4eiy_A Adenosine receptor A2A/ 99.9 1E-25 3.6E-30 198.2 16.6 147 81-229 27-173 (447)
16 4amj_A Beta-1 adrenergic recep 99.9 9.7E-26 3.3E-30 189.1 14.1 143 83-225 9-151 (315)
17 3rze_A Histamine H1 receptor, 99.9 1.1E-25 3.8E-30 198.3 15.0 142 86-228 9-150 (452)
18 3sn6_R Lysozyme, beta-2 adrene 99.9 7E-25 2.4E-29 197.5 12.0 139 84-222 181-319 (514)
19 1hll_A Alpha-2A adrenergic rec 98.8 2.8E-09 9.5E-14 58.6 2.1 31 171-201 2-32 (32)
20 2lot_A Apelin receptor; membra 95.5 0.00077 2.6E-08 42.5 -2.1 30 87-116 30-59 (64)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.96 E-value=1.1e-28 Score=222.37 Aligned_cols=150 Identities=24% Similarity=0.418 Sum_probs=134.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC---CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccccchh
Q psy1006 81 SLTHIVIASIFVIILMIIVIVGNMLVIIAIMTEKSL---KNIQNWFIASLAVADFSIGLIIMPFSLANELM--GYWIFGS 155 (239)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l---~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~--~~~~~~~ 155 (239)
.....++..+++.+++++|++||+++++++.++|++ ++++|+|++|||++|++++++.+|+.+..... +.|.+|+
T Consensus 28 ~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~ 107 (510)
T 4grv_A 28 DIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGD 107 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhH
Confidence 345567888888999999999999999999887654 47899999999999999999999999887654 4599999
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhccccccC
Q psy1006 156 FWCDIHSAMDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKVERHD 230 (239)
Q Consensus 156 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~~~~ 230 (239)
.+|++..++..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|++++++.....
T Consensus 108 ~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~ 182 (510)
T 4grv_A 108 AGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRS 182 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999988765543
No 2
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.96 E-value=1.1e-27 Score=204.21 Aligned_cols=149 Identities=19% Similarity=0.438 Sum_probs=137.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhH
Q psy1006 81 SLTHIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDI 160 (239)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~ 160 (239)
+.....+..+++.+++++|++||+++++++.++|++|+++|++++|||++|++.++..+|..+.....+.|.+++..|++
T Consensus 34 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 113 (349)
T 1u19_A 34 EPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNL 113 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHH
Confidence 34456677888889999999999999999999999999999999999999999999999999888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhccccccC
Q psy1006 161 HSAMDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKVERHD 230 (239)
Q Consensus 161 ~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~~~~ 230 (239)
..++..++..+|++++++||+|||+||++|++|++ .+++++...++++|+++++.++|++++++.+..+
T Consensus 114 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~ 182 (349)
T 1u19_A 114 EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPE 182 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999999999999999999877 7889999999999999999999999988766543
No 3
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.95 E-value=5.9e-27 Score=207.29 Aligned_cols=154 Identities=33% Similarity=0.645 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhHHHHH
Q psy1006 85 IVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDIHSAM 164 (239)
Q Consensus 85 ~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~~~~~ 164 (239)
..+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|..+.....+.|.++...|++..++
T Consensus 23 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 102 (467)
T 3uon_A 23 VVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLAL 102 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHHH
Confidence 46778888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhcccccc-CCCCCCCcc
Q psy1006 165 DVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKVERH-DHQQYPKCE 238 (239)
Q Consensus 165 ~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~~~-~~~~~~~C~ 238 (239)
..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|++++++.+.. ...+...|.
T Consensus 103 ~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~ 177 (467)
T 3uon_A 103 DYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECY 177 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcce
Confidence 99999999999999999999999999999999999999999999999999999999998776532 222334564
No 4
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.95 E-value=6.8e-26 Score=194.64 Aligned_cols=141 Identities=22% Similarity=0.485 Sum_probs=128.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhH
Q psy1006 81 SLTHIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDI 160 (239)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~ 160 (239)
+.....+..+++.+++++|++||+++++++.++|++|+++|++++|||++|++.+++.+|..+.....+.|..++..|++
T Consensus 28 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 107 (364)
T 2ks9_A 28 PAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKF 107 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHh
Confidence 34444566788889999999999999999999999999999999999999999999999998888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhh
Q psy1006 161 HSAMDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLG 223 (239)
Q Consensus 161 ~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~ 223 (239)
..++..++..+|++++++||+|||+||++|++|+ .++++++..++++|+++++.++|+++.
T Consensus 108 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~ 168 (364)
T 2ks9_A 108 HNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYY 168 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999999999999975 588889999999999999999987653
No 5
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.94 E-value=1.9e-26 Score=207.09 Aligned_cols=144 Identities=40% Similarity=0.790 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhHHH
Q psy1006 83 THIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDIHS 162 (239)
Q Consensus 83 ~~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~~~ 162 (239)
....+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|+.+.....+.|.+|...|++..
T Consensus 38 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~ 117 (500)
T 2rh1_A 38 VWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWT 117 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHH
Confidence 34466778888999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHh-hhccc
Q psy1006 163 AMDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPL-LGWKV 226 (239)
Q Consensus 163 ~~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~-~~~~~ 226 (239)
++..++..+|++++++||+|||+||++|++|++.++++++..+++++|+++++++++|+ ++|..
T Consensus 118 ~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~ 182 (500)
T 2rh1_A 118 SIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYR 182 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeec
Confidence 99999999999999999999999999999999999999999999999999999996554 45443
No 6
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.94 E-value=6.1e-26 Score=190.10 Aligned_cols=144 Identities=24% Similarity=0.447 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhHHHH
Q psy1006 84 HIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDIHSA 163 (239)
Q Consensus 84 ~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~~~~ 163 (239)
.+.+..+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++ .+|+.+.... .+|..|+..|+...+
T Consensus 10 ~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~~~~~~~~~c~~~~~ 87 (296)
T 2lnl_A 10 NKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTFLCKVVSL 87 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH-SSSCCSSHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-CCCccchhHHHHHhh
Confidence 34566778889999999999999999999999999999999999999999865 5677766544 569999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhccccccC
Q psy1006 164 MDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKVERHD 230 (239)
Q Consensus 164 ~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~~~~ 230 (239)
+...+..+|++++++||+|||+||++|++|+... +++...+++++|+.+++.++|+.++++.+..+
T Consensus 88 ~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~ 153 (296)
T 2lnl_A 88 LKEVNFYSGILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPN 153 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCC
T ss_pred hhhhhHHHHHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHHHHHhcchhhcceeecCC
Confidence 9999999999999999999999999999987654 45677778889999999999999988776654
No 7
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.94 E-value=1.7e-26 Score=205.38 Aligned_cols=155 Identities=22% Similarity=0.326 Sum_probs=131.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccchhhhHhH
Q psy1006 82 LTHIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELM-GYWIFGSFWCDI 160 (239)
Q Consensus 82 ~~~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~-~~~~~~~~~C~~ 160 (239)
.....+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.++. +|+.+..... +.|.++...|++
T Consensus 17 ~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~~~~~~~~~C~~ 95 (484)
T 3vw7_A 17 SWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFSGSDWQFGSELCRF 95 (484)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTSCCCSCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCcccchhHHhH
Confidence 34556778888999999999999999999999999999999999999999999654 6666655555 479999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhccccccCCCCCCCc
Q psy1006 161 HSAMDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKVERHDHQQYPKC 237 (239)
Q Consensus 161 ~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~~~~~~~~~~C 237 (239)
..++..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|+++++........+...|
T Consensus 96 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C 172 (484)
T 3vw7_A 96 VTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTC 172 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999888765443333455
No 8
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.94 E-value=5.6e-26 Score=205.17 Aligned_cols=143 Identities=20% Similarity=0.384 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhHHH
Q psy1006 83 THIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDIHS 162 (239)
Q Consensus 83 ~~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~~~ 162 (239)
....+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++++++..|..+.. ....|..+...|++..
T Consensus 61 ~~~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~ 139 (520)
T 3v2y_A 61 NSIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLRE 139 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHH
Confidence 334677888899999999999999999999999999999999999999999998888877765 5667889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhcccc
Q psy1006 163 AMDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKVE 227 (239)
Q Consensus 163 ~~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~ 227 (239)
++..++.++|++++++||+|||+||+ |++|++.++++++..+++++|++++++++||+++|+.+
T Consensus 140 ~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~ 203 (520)
T 3v2y_A 140 GSMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI 203 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc
Confidence 99999999999999999999999999 99999999999999999999999999999999998876
No 9
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.94 E-value=4e-26 Score=203.87 Aligned_cols=152 Identities=28% Similarity=0.446 Sum_probs=136.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhHH
Q psy1006 82 LTHIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDIH 161 (239)
Q Consensus 82 ~~~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~~ 161 (239)
.....+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++ ++.+|+.+..... .|.++...|++.
T Consensus 45 ~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~-~~~~p~~~~~~~~-~~~~~~~~C~~~ 122 (502)
T 3odu_A 45 NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLF-VITLPFWAVDAVA-NWYFGNFLCKAV 122 (502)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHT-CCCSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhc-CCcCCchhhhhH
Confidence 44567888888999999999999999999999999999999999999999999 4688888876654 799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhccccccCCCCCCCc
Q psy1006 162 SAMDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKVERHDHQQYPKC 237 (239)
Q Consensus 162 ~~~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~~~~~~~~~~C 237 (239)
.++..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|+++.++..... +...|
T Consensus 123 ~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~--~~~~C 196 (502)
T 3odu_A 123 HVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEAD--DRYIC 196 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECS--SSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccC--CceEE
Confidence 999999999999999999999999999999999999999999999999999999999999877654433 33355
No 10
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.94 E-value=4.9e-26 Score=201.03 Aligned_cols=145 Identities=30% Similarity=0.513 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhHHH
Q psy1006 83 THIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDIHS 162 (239)
Q Consensus 83 ~~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~~~ 162 (239)
....+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.++. +|+.+.....+.|.++...|++..
T Consensus 15 ~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~~ 93 (464)
T 4dkl_A 15 VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVI 93 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhHH
Confidence 3457778888999999999999999999999999999999999999999999776 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhccccc
Q psy1006 163 AMDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKVER 228 (239)
Q Consensus 163 ~~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~~ 228 (239)
++..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|+++......
T Consensus 94 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~ 159 (464)
T 4dkl_A 94 SIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKY 159 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecc
Confidence 999999999999999999999999999999999999999999999999999999999988655443
No 11
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.94 E-value=1.7e-25 Score=197.85 Aligned_cols=155 Identities=31% Similarity=0.497 Sum_probs=139.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccccchhhhHhH
Q psy1006 82 LTHIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLII-MPFSLANELMGYWIFGSFWCDI 160 (239)
Q Consensus 82 ~~~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~-~p~~i~~~~~~~~~~~~~~C~~ 160 (239)
.....+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.+++. +|..+.....+.|.++...|++
T Consensus 31 ~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~ 110 (448)
T 2z73_A 31 DAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKV 110 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHH
Confidence 334566778888999999999999999999999999999999999999999998774 8888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhccccccCCCCCCCc
Q psy1006 161 HSAMDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKVERHDHQQYPKC 237 (239)
Q Consensus 161 ~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~~~~~~~~~~C 237 (239)
..++..++..+|++++++||+|||++|++|++|++.+++++++.+++++|+++++++++++++++.+..+ .....|
T Consensus 111 ~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~-~~~~~c 186 (448)
T 2z73_A 111 YGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLE-GVLCNC 186 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEEC-TTSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeec-CCceeE
Confidence 9999999999999999999999999999999999999999999999999999999999999988876554 233345
No 12
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.94 E-value=6.6e-26 Score=201.45 Aligned_cols=142 Identities=35% Similarity=0.702 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccchhhhHhHHHHH
Q psy1006 86 VIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELM-GYWIFGSFWCDIHSAM 164 (239)
Q Consensus 86 ~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~-~~~~~~~~~C~~~~~~ 164 (239)
.+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|..+..... +.|.++...|++..++
T Consensus 39 ~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~ 118 (481)
T 3pbl_A 39 AYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTL 118 (481)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHHH
Confidence 455677788999999999999999999999999999999999999999999999988877766 6799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccc---ccccchhhHHHHhHHhhHHHHHHHHHHhhhcccc
Q psy1006 165 DVLLCTASIINLCLISLDRYWSITQAIDY---LKKRTPGRAMVMITMVWILSAVICIPPLLGWKVE 227 (239)
Q Consensus 165 ~~~~~~~s~~~l~~isidRy~ai~~P~~y---~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~ 227 (239)
..++..+|++++++||+|||+||++|++| .+..+++++..+++++|++++++++|++++++..
T Consensus 119 ~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~ 184 (481)
T 3pbl_A 119 DVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTT 184 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheeccc
Confidence 99999999999999999999999999998 6788889999999999999999999999987764
No 13
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.94 E-value=8.3e-26 Score=200.79 Aligned_cols=142 Identities=29% Similarity=0.534 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhHHHHHH
Q psy1006 86 VIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDIHSAMD 165 (239)
Q Consensus 86 ~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~~~~~~ 165 (239)
.+..+++++++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|+.+.... .|..+...|++..++.
T Consensus 22 ~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~~~~~~~ 99 (488)
T 3eml_A 22 SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLFIACFV 99 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHHHHHHHH
Confidence 57778888999999999999999999999999999999999999999999999998886443 6888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhcccccc
Q psy1006 166 VLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKVERH 229 (239)
Q Consensus 166 ~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~~~ 229 (239)
.++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|++++++.+..
T Consensus 100 ~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~ 163 (488)
T 3eml_A 100 LVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQ 163 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 9999999999999999999999999999999999999999999999999999999998886654
No 14
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.94 E-value=2.2e-25 Score=196.68 Aligned_cols=145 Identities=28% Similarity=0.471 Sum_probs=127.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhH
Q psy1006 81 SLTHIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDI 160 (239)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~ 160 (239)
+...+.+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++. ++.+|..+.....+.|.++...|++
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~ 199 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKT 199 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHH
Confidence 455667778888899999999999999999999999999999999999999998 7789999998888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhccc
Q psy1006 161 HSAMDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKV 226 (239)
Q Consensus 161 ~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~ 226 (239)
..++..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|+++....
T Consensus 200 ~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~ 265 (434)
T 4ea3_A 200 VIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSA 265 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeee
Confidence 999999999999999999999999999999999999999999999999999999999988875443
No 15
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.93 E-value=1e-25 Score=198.21 Aligned_cols=147 Identities=28% Similarity=0.515 Sum_probs=134.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhH
Q psy1006 81 SLTHIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDI 160 (239)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~ 160 (239)
+.....+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|..+... ..|..+...|++
T Consensus 27 ~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~~ 104 (447)
T 4eiy_A 27 PIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLF 104 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHHH
Confidence 445567788888899999999999999999999999999999999999999999999999887643 367778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhcccccc
Q psy1006 161 HSAMDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKVERH 229 (239)
Q Consensus 161 ~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~~~ 229 (239)
..++..++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|++++|+.+..
T Consensus 105 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~ 173 (447)
T 4eiy_A 105 IACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQ 173 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccc
Confidence 999999999999999999999999999999999999999999999999999999999999998876554
No 16
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.93 E-value=9.7e-26 Score=189.13 Aligned_cols=143 Identities=37% Similarity=0.702 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhHHH
Q psy1006 83 THIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDIHS 162 (239)
Q Consensus 83 ~~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~~~ 162 (239)
.......+++.+++++|++||+++++++.++|++|+++|++++|||++|++.++..+|..+.....+.|.+++..|++..
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 88 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWT 88 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHH
Confidence 34567778888999999999999999999999999999999999999999998889999998888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhcc
Q psy1006 163 AMDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWK 225 (239)
Q Consensus 163 ~~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~ 225 (239)
++...+..+|++++++||+|||+||++|++|++..+++++..+++++|+++++.+.||++...
T Consensus 89 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~ 151 (315)
T 4amj_A 89 SLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHW 151 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999998887643
No 17
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.93 E-value=1.1e-25 Score=198.30 Aligned_cols=142 Identities=34% Similarity=0.601 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhHHHHHH
Q psy1006 86 VIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDIHSAMD 165 (239)
Q Consensus 86 ~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~~~~~~ 165 (239)
.+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|..+.....+.|.++...|++..++.
T Consensus 9 ~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 88 (452)
T 3rze_A 9 MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMD 88 (452)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHH
Confidence 45567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhhhccccc
Q psy1006 166 VLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLLGWKVER 228 (239)
Q Consensus 166 ~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~~~~~~~ 228 (239)
.++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++| .+++..+.
T Consensus 89 ~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p-~~~~~~~~ 150 (452)
T 3rze_A 89 YVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIP-ILGWNHFM 150 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHH-HHCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHH-HHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999887 45555443
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.92 E-value=7e-25 Score=197.46 Aligned_cols=139 Identities=40% Similarity=0.772 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHhHHHH
Q psy1006 84 HIVIASIFVIILMIIVIVGNMLVIIAIMTEKSLKNIQNWFIASLAVADFSIGLIIMPFSLANELMGYWIFGSFWCDIHSA 163 (239)
Q Consensus 84 ~~~~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l~~~~~~li~~La~~Dll~~~~~~p~~i~~~~~~~~~~~~~~C~~~~~ 163 (239)
...+..+++.+++++|++||+++++++.++|++|+++|++++|||++|++.+++.+|..+.....+.|.++...|++..+
T Consensus 181 ~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 260 (514)
T 3sn6_R 181 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTS 260 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHH
Confidence 44667788889999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHhHHhhHHHHHHHHHHhh
Q psy1006 164 MDVLLCTASIINLCLISLDRYWSITQAIDYLKKRTPGRAMVMITMVWILSAVICIPPLL 222 (239)
Q Consensus 164 ~~~~~~~~s~~~l~~isidRy~ai~~P~~y~~~~t~~~~~~~i~~iWl~s~~~~~~~~~ 222 (239)
+..++..+|++++++||+|||++|++|++|++.++++++..+++++|+++++++++|++
T Consensus 261 l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~ 319 (514)
T 3sn6_R 261 IDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQ 319 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999876664
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.76 E-value=2.8e-09 Score=58.61 Aligned_cols=31 Identities=74% Similarity=1.207 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHhhhhccccccccchhh
Q psy1006 171 ASIINLCLISLDRYWSITQAIDYLKKRTPGR 201 (239)
Q Consensus 171 ~s~~~l~~isidRy~ai~~P~~y~~~~t~~~ 201 (239)
+|++++++||+|||+||++|++|+..+++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~~ 32 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPRR 32 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCCC
Confidence 6899999999999999999999988777653
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=95.54 E-value=0.00077 Score=42.50 Aligned_cols=30 Identities=17% Similarity=0.392 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q psy1006 87 IASIFVIILMIIVIVGNMLVIIAIMTEKSL 116 (239)
Q Consensus 87 ~~~~~~~~i~~~gv~gN~lvl~~~~~~~~l 116 (239)
+..+++.+++++|++||.++++++.++|.-
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 456778899999999999999999887753
Done!