Query psy10063
Match_columns 894
No_of_seqs 755 out of 3327
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 16:56:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10063.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10063hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 3.6E-48 1.2E-52 464.1 60.0 458 380-875 20-610 (611)
2 2ymu_A WD-40 repeat protein; u 100.0 2.5E-46 8.6E-51 444.2 56.5 454 376-873 14-577 (577)
3 2ymu_A WD-40 repeat protein; u 100.0 3.3E-44 1.1E-48 426.1 56.2 454 401-883 8-545 (577)
4 1nr0_A Actin interacting prote 100.0 2.7E-43 9.2E-48 421.8 47.5 439 407-878 16-569 (611)
5 1pgu_A Actin interacting prote 100.0 7.7E-42 2.6E-46 408.1 57.2 466 379-876 19-614 (615)
6 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-40 6.7E-45 429.7 55.9 472 377-875 614-1248(1249)
7 2oaj_A Protein SNI1; WD40 repe 100.0 1.8E-40 6.1E-45 412.8 47.3 444 403-883 11-671 (902)
8 1vyh_C Platelet-activating fac 100.0 2.1E-40 7.1E-45 376.8 37.7 302 402-875 101-410 (410)
9 1got_B GT-beta; complex (GTP-b 100.0 8.5E-40 2.9E-44 361.9 41.2 285 400-873 46-340 (340)
10 3ow8_A WD repeat-containing pr 100.0 7.2E-40 2.5E-44 359.5 39.6 288 400-875 23-320 (321)
11 3sfz_A APAF-1, apoptotic pepti 100.0 3.5E-39 1.2E-43 417.9 51.1 460 401-883 607-1165(1249)
12 2ynn_A Coatomer subunit beta'; 100.0 1.3E-38 4.3E-43 346.7 41.2 289 401-877 5-303 (304)
13 2pbi_B Guanine nucleotide-bind 100.0 8.6E-39 2.9E-43 356.0 40.6 286 400-873 55-354 (354)
14 3iz6_a 40S ribosomal protein R 100.0 3.2E-39 1.1E-43 363.1 34.6 293 399-878 56-377 (380)
15 1pgu_A Actin interacting prote 100.0 5E-38 1.7E-42 375.1 46.8 438 406-884 15-581 (615)
16 3frx_A Guanine nucleotide-bind 100.0 3.5E-38 1.2E-42 345.7 41.1 288 400-877 8-318 (319)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.5E-38 8.4E-43 350.9 39.4 297 401-883 7-342 (345)
18 4ery_A WD repeat-containing pr 100.0 1.2E-37 4.1E-42 339.6 43.9 290 399-875 13-311 (312)
19 3zwl_B Eukaryotic translation 100.0 1.6E-37 5.6E-42 344.9 40.3 318 399-888 22-358 (369)
20 2xzm_R RACK1; ribosome, transl 100.0 2E-37 6.9E-42 343.2 40.3 287 401-878 13-342 (343)
21 2oaj_A Protein SNI1; WD40 repe 100.0 5.4E-37 1.8E-41 381.5 47.8 454 379-883 18-739 (902)
22 4gqb_B Methylosome protein 50; 100.0 7.3E-38 2.5E-42 346.8 32.0 291 407-879 28-334 (344)
23 4g56_B MGC81050 protein; prote 100.0 1.2E-37 4.2E-42 347.1 34.0 287 405-879 38-346 (357)
24 1erj_A Transcriptional repress 100.0 8.3E-37 2.8E-41 345.0 40.8 308 405-877 60-390 (393)
25 3mkq_A Coatomer beta'-subunit; 100.0 1.8E-36 6.3E-41 374.7 45.1 410 378-885 13-469 (814)
26 1r5m_A SIR4-interacting protei 100.0 8E-37 2.7E-41 346.3 36.8 308 403-876 39-425 (425)
27 2hes_X YDR267CP; beta-propelle 100.0 3.4E-36 1.2E-40 331.5 38.8 288 400-876 5-328 (330)
28 1gxr_A ESG1, transducin-like e 100.0 1.1E-35 3.9E-40 325.9 39.9 303 381-874 12-335 (337)
29 4aow_A Guanine nucleotide-bind 100.0 2.9E-35 1E-39 323.5 41.9 290 400-878 29-339 (340)
30 3dm0_A Maltose-binding peripla 100.0 5E-35 1.7E-39 355.6 42.5 288 400-876 373-693 (694)
31 3ei3_B DNA damage-binding prot 100.0 5.4E-35 1.8E-39 328.3 36.3 290 399-876 63-382 (383)
32 4e54_B DNA damage-binding prot 100.0 5.6E-35 1.9E-39 334.7 34.3 293 404-879 114-433 (435)
33 3k26_A Polycomb protein EED; W 100.0 3E-35 1E-39 326.5 30.3 316 403-875 12-365 (366)
34 1k8k_C P40, ARP2/3 complex 41 100.0 2.6E-34 8.9E-39 320.2 38.1 304 405-879 4-364 (372)
35 2pm9_A Protein WEB1, protein t 100.0 2.2E-35 7.4E-40 334.5 29.5 284 407-877 65-415 (416)
36 1sq9_A Antiviral protein SKI8; 100.0 8.9E-35 3.1E-39 327.4 33.8 290 401-878 8-397 (397)
37 2ynn_A Coatomer subunit beta'; 100.0 1.6E-34 5.6E-39 314.1 33.8 246 478-885 15-268 (304)
38 4a11_B DNA excision repair pro 100.0 8.1E-34 2.8E-38 319.9 40.0 323 402-883 36-372 (408)
39 3gre_A Serine/threonine-protei 100.0 2.2E-34 7.6E-39 329.3 35.0 302 383-873 32-437 (437)
40 3odt_A Protein DOA1; ubiquitin 100.0 1.7E-33 5.7E-38 305.4 38.6 293 400-889 9-309 (313)
41 3vl1_A 26S proteasome regulato 100.0 1.5E-34 5E-39 328.5 30.8 345 403-876 47-419 (420)
42 3i2n_A WD repeat-containing pr 100.0 3.3E-34 1.1E-38 317.1 31.0 291 400-879 9-356 (357)
43 4gga_A P55CDC, cell division c 100.0 3.8E-33 1.3E-37 317.8 39.6 289 410-884 106-403 (420)
44 3ow8_A WD repeat-containing pr 100.0 5.1E-33 1.7E-37 305.0 37.2 243 403-833 74-320 (321)
45 3f3f_A Nucleoporin SEH1; struc 100.0 2E-33 6.9E-38 308.3 32.7 301 402-884 4-345 (351)
46 1vyh_C Platelet-activating fac 100.0 4.9E-33 1.7E-37 316.0 36.7 269 377-833 107-410 (410)
47 3dwl_C Actin-related protein 2 100.0 2.1E-34 7.3E-39 322.3 23.7 298 405-874 7-377 (377)
48 4ggc_A P55CDC, cell division c 100.0 1.8E-32 6.1E-37 298.2 37.9 279 412-876 28-315 (318)
49 4h5i_A Guanine nucleotide-exch 100.0 9.4E-34 3.2E-38 316.6 28.4 293 408-879 13-346 (365)
50 4aez_A CDC20, WD repeat-contai 100.0 1.2E-32 4.1E-37 311.7 37.0 296 400-883 82-387 (401)
51 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.4E-32 1.8E-36 310.6 42.8 319 402-877 111-443 (445)
52 4gqb_B Methylosome protein 50; 100.0 7E-33 2.4E-37 306.7 33.9 268 381-837 33-334 (344)
53 2j04_B YDR362CP, TAU91; beta p 100.0 4.5E-34 1.5E-38 332.9 25.5 323 408-879 132-520 (524)
54 1erj_A Transcriptional repress 100.0 1.9E-32 6.4E-37 309.3 38.0 281 378-834 64-389 (393)
55 3mkq_A Coatomer beta'-subunit; 100.0 3.9E-32 1.3E-36 335.9 42.9 399 377-873 54-502 (814)
56 3v7d_B Cell division control p 100.0 1.7E-31 6E-36 307.8 43.6 302 400-874 112-461 (464)
57 1gxr_A ESG1, transducin-like e 100.0 9.3E-33 3.2E-37 302.6 31.2 289 407-885 7-305 (337)
58 2pm7_B Protein transport prote 100.0 2E-32 7E-37 296.5 32.5 255 403-875 3-284 (297)
59 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.1E-32 1.7E-36 300.1 35.6 289 380-841 18-342 (345)
60 3frx_A Guanine nucleotide-bind 100.0 1.9E-31 6.6E-36 292.0 39.0 242 403-835 59-318 (319)
61 1got_B GT-beta; complex (GTP-b 100.0 1.7E-31 6E-36 295.1 38.6 268 377-831 54-340 (340)
62 3bg1_A Protein SEC13 homolog; 100.0 8.7E-33 3E-37 302.3 25.6 256 400-875 4-292 (316)
63 3dw8_B Serine/threonine-protei 100.0 8.1E-32 2.8E-36 308.3 34.9 302 407-874 26-444 (447)
64 2pm9_A Protein WEB1, protein t 100.0 5.8E-33 2E-37 314.5 24.6 291 408-881 11-342 (416)
65 4g56_B MGC81050 protein; prote 100.0 9.9E-32 3.4E-36 299.3 32.7 269 379-836 43-345 (357)
66 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-32 3.8E-37 313.5 23.8 304 404-864 10-349 (588)
67 1yfq_A Cell cycle arrest prote 100.0 1.5E-31 5E-36 294.4 32.1 278 405-874 7-322 (342)
68 3mmy_A MRNA export factor; mRN 100.0 2.1E-31 7.2E-36 295.4 31.5 285 401-874 31-344 (368)
69 2xzm_R RACK1; ribosome, transl 100.0 1.2E-30 4.1E-35 288.7 37.1 161 403-603 70-243 (343)
70 4ery_A WD repeat-containing pr 100.0 1.2E-30 4.2E-35 284.1 36.4 245 478-885 25-277 (312)
71 1r5m_A SIR4-interacting protei 100.0 8.4E-31 2.9E-35 296.6 34.1 314 431-878 25-363 (425)
72 2pbi_B Guanine nucleotide-bind 100.0 3.9E-30 1.3E-34 286.0 38.4 270 376-831 62-354 (354)
73 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-30 5.7E-35 297.4 35.9 279 405-883 129-421 (435)
74 3jrp_A Fusion protein of prote 100.0 4.8E-31 1.6E-35 294.0 30.3 258 401-876 3-287 (379)
75 3iz6_a 40S ribosomal protein R 100.0 7.5E-31 2.6E-35 294.8 30.1 279 377-836 65-377 (380)
76 2hes_X YDR267CP; beta-propelle 100.0 6.5E-30 2.2E-34 281.3 35.7 184 382-604 26-230 (330)
77 3vl1_A 26S proteasome regulato 100.0 4.5E-30 1.5E-34 291.4 33.1 207 383-605 61-323 (420)
78 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.9E-29 6.5E-34 290.0 32.8 302 410-877 5-392 (450)
79 3dm0_A Maltose-binding peripla 100.0 7E-29 2.4E-33 301.5 37.4 164 403-605 424-593 (694)
80 2aq5_A Coronin-1A; WD40 repeat 100.0 9.4E-30 3.2E-34 287.8 26.4 281 410-879 35-345 (402)
81 2j04_B YDR362CP, TAU91; beta p 100.0 7.6E-30 2.6E-34 297.3 25.2 186 404-605 202-429 (524)
82 4h5i_A Guanine nucleotide-exch 100.0 1.3E-29 4.4E-34 283.0 25.7 278 380-835 16-344 (365)
83 3k26_A Polycomb protein EED; W 100.0 6.1E-29 2.1E-33 275.6 30.3 250 408-833 68-365 (366)
84 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-28 7E-33 272.4 34.7 188 379-605 9-234 (372)
85 3zwl_B Eukaryotic translation 100.0 2.6E-28 9.1E-33 270.5 34.1 276 377-842 31-354 (369)
86 1l0q_A Surface layer protein; 100.0 7.3E-28 2.5E-32 270.6 37.4 276 422-885 3-284 (391)
87 3gre_A Serine/threonine-protei 100.0 1.5E-29 5.1E-34 289.2 23.6 273 416-884 34-367 (437)
88 4aez_A CDC20, WD repeat-contai 100.0 1.4E-27 4.9E-32 269.9 38.7 271 381-842 104-388 (401)
89 2w18_A PALB2, fancn, partner a 100.0 3.6E-28 1.2E-32 260.4 31.0 290 412-874 42-355 (356)
90 1sq9_A Antiviral protein SKI8; 100.0 1.6E-28 5.4E-33 276.3 28.6 280 381-836 27-397 (397)
91 3i2n_A WD repeat-containing pr 100.0 2.5E-28 8.6E-33 269.8 29.3 213 379-606 19-293 (357)
92 3vu4_A KMHSV2; beta-propeller 100.0 6.5E-28 2.2E-32 268.2 32.2 294 404-881 14-341 (355)
93 3v7d_B Cell division control p 100.0 2.5E-27 8.7E-32 272.9 38.0 295 479-883 125-428 (464)
94 4aow_A Guanine nucleotide-bind 100.0 9.4E-27 3.2E-31 255.5 39.7 278 377-793 37-339 (340)
95 3dwl_C Actin-related protein 2 100.0 8.5E-29 2.9E-33 276.8 23.2 239 478-877 13-282 (377)
96 2xyi_A Probable histone-bindin 100.0 6.1E-28 2.1E-32 275.7 30.7 267 402-880 121-414 (430)
97 3bws_A Protein LP49; two-domai 100.0 2.5E-27 8.6E-32 270.1 35.5 281 409-876 122-432 (433)
98 3ei3_B DNA damage-binding prot 100.0 4.8E-28 1.6E-32 271.5 28.9 260 434-885 56-348 (383)
99 3jro_A Fusion protein of prote 100.0 1.5E-28 5.3E-33 300.8 27.0 258 402-877 2-286 (753)
100 4gq1_A NUP37; propeller, trans 100.0 7.4E-28 2.5E-32 271.7 29.5 321 411-876 17-389 (393)
101 3dw8_B Serine/threonine-protei 100.0 2.3E-27 8E-32 271.2 34.0 211 377-604 27-315 (447)
102 2pm7_B Protein transport prote 100.0 2.5E-27 8.4E-32 256.5 32.0 187 379-604 10-238 (297)
103 1l0q_A Surface layer protein; 100.0 4.3E-26 1.5E-30 256.1 42.1 303 385-879 7-345 (391)
104 4gga_A P55CDC, cell division c 100.0 5.8E-27 2E-31 266.7 34.8 262 404-856 142-417 (420)
105 3lrv_A PRE-mRNA-splicing facto 100.0 5.2E-28 1.8E-32 267.4 25.2 266 416-878 43-335 (343)
106 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.1E-26 1E-30 262.6 40.7 297 384-834 123-442 (445)
107 3odt_A Protein DOA1; ubiquitin 100.0 4.3E-27 1.5E-31 254.8 31.3 251 441-886 8-265 (313)
108 1yfq_A Cell cycle arrest prote 100.0 2.5E-27 8.5E-32 260.6 28.4 249 478-885 13-291 (342)
109 4e54_B DNA damage-binding prot 100.0 1.7E-27 5.9E-32 272.4 28.1 188 381-606 122-329 (435)
110 4a11_B DNA excision repair pro 100.0 2.4E-26 8.3E-31 258.6 37.1 316 377-833 42-404 (408)
111 2aq5_A Coronin-1A; WD40 repeat 100.0 4.2E-27 1.4E-31 266.0 30.7 246 404-837 76-345 (402)
112 3jrp_A Fusion protein of prote 100.0 1.5E-26 5.1E-31 257.6 34.4 190 377-605 10-241 (379)
113 2j04_A TAU60, YPL007P, hypothe 100.0 2E-27 6.7E-32 270.5 23.8 253 454-875 17-296 (588)
114 4ggc_A P55CDC, cell division c 100.0 5.3E-26 1.8E-30 247.0 33.6 184 404-605 62-274 (318)
115 3bg1_A Protein SEC13 homolog; 100.0 9.1E-27 3.1E-31 254.4 26.5 187 379-604 14-247 (316)
116 3f3f_A Nucleoporin SEH1; struc 100.0 2.3E-26 7.8E-31 252.0 29.1 192 376-606 9-251 (351)
117 1k32_A Tricorn protease; prote 99.9 5.8E-25 2E-29 279.1 45.1 385 402-877 45-503 (1045)
118 1nir_A Nitrite reductase; hemo 99.9 4.1E-25 1.4E-29 259.2 37.6 325 416-884 144-522 (543)
119 1p22_A F-BOX/WD-repeat protein 99.9 5.6E-25 1.9E-29 251.4 34.8 273 381-854 134-433 (435)
120 3mmy_A MRNA export factor; mRN 99.9 3.2E-25 1.1E-29 245.5 31.0 259 435-885 23-313 (368)
121 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.5E-25 8.6E-30 255.6 29.5 239 478-877 6-342 (450)
122 3bws_A Protein LP49; two-domai 99.9 2.6E-24 8.8E-29 245.1 36.1 292 403-885 54-399 (433)
123 3jro_A Fusion protein of prote 99.9 3.6E-25 1.2E-29 270.9 29.3 189 378-605 9-239 (753)
124 3vu4_A KMHSV2; beta-propeller 99.9 1.1E-24 3.6E-29 242.2 30.3 182 377-605 18-228 (355)
125 3lrv_A PRE-mRNA-splicing facto 99.9 1.9E-25 6.5E-30 246.8 22.9 238 484-879 44-295 (343)
126 4gq1_A NUP37; propeller, trans 99.9 4.9E-25 1.7E-29 248.5 25.8 162 407-607 87-289 (393)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.6E-25 1.9E-29 249.9 25.8 300 408-879 61-390 (415)
128 2w18_A PALB2, fancn, partner a 99.9 1.3E-24 4.4E-29 232.9 26.7 189 409-606 111-316 (356)
129 1k32_A Tricorn protease; prote 99.9 8.3E-24 2.8E-28 268.5 38.1 396 408-879 13-464 (1045)
130 2ecf_A Dipeptidyl peptidase IV 99.9 3.2E-24 1.1E-28 262.3 31.2 340 409-878 36-461 (741)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.4E-23 8.1E-28 236.5 30.4 269 403-858 111-410 (415)
132 3u4y_A Uncharacterized protein 99.9 2.1E-22 7.1E-27 220.5 32.4 287 415-883 3-311 (331)
133 1nir_A Nitrite reductase; hemo 99.9 8.4E-22 2.9E-26 231.0 38.1 337 385-859 144-533 (543)
134 3vgz_A Uncharacterized protein 99.9 7.5E-22 2.6E-26 217.7 34.7 277 407-867 38-335 (353)
135 1xfd_A DIP, dipeptidyl aminope 99.9 1.9E-23 6.5E-28 254.7 23.9 329 410-876 17-393 (723)
136 2xyi_A Probable histone-bindin 99.9 1.1E-22 3.8E-27 232.1 27.8 163 403-604 175-353 (430)
137 1pby_B Quinohemoprotein amine 99.9 4.3E-22 1.5E-26 217.7 27.4 296 422-886 2-320 (337)
138 1ri6_A Putative isomerase YBHE 99.9 2.5E-21 8.4E-26 212.3 31.7 270 423-875 7-307 (343)
139 1xfd_A DIP, dipeptidyl aminope 99.9 1.4E-21 4.8E-26 238.2 30.8 199 383-605 21-290 (723)
140 2ojh_A Uncharacterized protein 99.9 7.2E-22 2.5E-26 211.0 24.3 257 426-867 17-293 (297)
141 2z3z_A Dipeptidyl aminopeptida 99.9 2E-21 7E-26 236.1 31.5 338 412-878 28-437 (706)
142 2ecf_A Dipeptidyl peptidase IV 99.9 2E-21 7E-26 237.4 27.8 167 412-606 111-323 (741)
143 3pe7_A Oligogalacturonate lyas 99.9 1.9E-20 6.6E-25 209.7 29.8 308 396-876 17-382 (388)
144 2z3z_A Dipeptidyl aminopeptida 99.9 2.4E-20 8.1E-25 226.7 31.9 167 410-605 82-294 (706)
145 3u4y_A Uncharacterized protein 99.9 1.6E-19 5.4E-24 197.5 34.4 183 387-605 17-208 (331)
146 1jmx_B Amine dehydrogenase; ox 99.9 3.2E-20 1.1E-24 204.1 28.5 309 414-886 4-335 (349)
147 1z68_A Fibroblast activation p 99.9 3.1E-21 1E-25 235.1 22.0 319 414-876 20-391 (719)
148 1ri6_A Putative isomerase YBHE 99.9 3.8E-19 1.3E-23 194.8 36.4 162 403-604 31-209 (343)
149 3o4h_A Acylamino-acid-releasin 99.9 1.3E-20 4.3E-25 223.8 25.2 266 409-876 21-315 (582)
150 3hfq_A Uncharacterized protein 99.9 3.3E-19 1.1E-23 196.7 32.6 244 478-880 41-323 (347)
151 2ojh_A Uncharacterized protein 99.9 6.8E-20 2.3E-24 195.6 24.8 224 388-626 20-286 (297)
152 3vgz_A Uncharacterized protein 99.8 5.2E-19 1.8E-23 194.8 30.8 246 478-886 42-313 (353)
153 1z68_A Fibroblast activation p 99.8 1.5E-20 5.2E-25 229.0 19.9 192 383-601 20-284 (719)
154 1pby_B Quinohemoprotein amine 99.8 5.3E-19 1.8E-23 193.1 29.1 271 411-846 35-322 (337)
155 4a5s_A Dipeptidyl peptidase 4 99.8 8.2E-19 2.8E-23 214.3 32.2 381 409-881 16-454 (740)
156 3scy_A Hypothetical bacterial 99.8 1.4E-17 4.8E-22 184.7 34.6 114 763-880 213-343 (361)
157 3scy_A Hypothetical bacterial 99.8 2.3E-17 7.8E-22 183.0 35.1 263 408-854 48-360 (361)
158 3hfq_A Uncharacterized protein 99.8 1.5E-17 5E-22 183.4 31.6 160 404-604 34-218 (347)
159 3c5m_A Oligogalacturonate lyas 99.8 2.4E-18 8.2E-23 192.7 25.5 287 411-875 37-381 (396)
160 1jof_A Carboxy-CIS,CIS-muconat 99.8 8.5E-18 2.9E-22 187.1 28.4 245 478-878 41-343 (365)
161 3o4h_A Acylamino-acid-releasin 99.8 2.3E-18 7.8E-23 204.4 23.1 184 381-605 24-228 (582)
162 2oiz_A Aromatic amine dehydrog 99.8 5.8E-17 2E-21 180.0 30.8 280 420-883 14-343 (361)
163 2oit_A Nucleoporin 214KDA; NH2 99.8 8.5E-18 2.9E-22 191.5 23.5 171 408-603 35-222 (434)
164 2oit_A Nucleoporin 214KDA; NH2 99.8 9.2E-18 3.1E-22 191.3 22.9 187 379-605 37-279 (434)
165 4a5s_A Dipeptidyl peptidase 4 99.8 1.8E-16 6.2E-21 193.5 34.5 197 382-606 20-296 (740)
166 3azo_A Aminopeptidase; POP fam 99.8 2.8E-17 9.6E-22 198.0 25.3 192 404-602 18-270 (662)
167 1jmx_B Amine dehydrogenase; ox 99.7 6.2E-16 2.1E-20 169.7 30.9 125 411-571 44-184 (349)
168 1jof_A Carboxy-CIS,CIS-muconat 99.7 8.6E-16 2.9E-20 170.9 31.6 169 407-603 37-223 (365)
169 3c5m_A Oligogalacturonate lyas 99.7 4.3E-17 1.5E-21 182.5 18.3 207 383-605 40-274 (396)
170 3pe7_A Oligogalacturonate lyas 99.7 2.9E-16 9.8E-21 175.6 23.3 124 433-590 12-141 (388)
171 1qks_A Cytochrome CD1 nitrite 99.7 2.3E-14 7.8E-19 167.6 38.9 325 419-884 165-546 (567)
172 2gop_A Trilobed protease; beta 99.7 1.5E-15 5E-20 167.1 26.1 149 410-594 15-190 (347)
173 2oiz_A Aromatic amine dehydrog 99.7 3.3E-15 1.1E-19 165.8 28.2 283 401-858 43-360 (361)
174 2dg1_A DRP35, lactonase; beta 99.7 4.2E-15 1.4E-19 162.6 25.8 142 409-592 5-153 (333)
175 1q7f_A NHL, brain tumor CG1071 99.7 2E-14 6.7E-19 153.6 30.2 161 407-603 27-193 (286)
176 3fvz_A Peptidyl-glycine alpha- 99.6 2E-14 6.7E-19 157.4 26.3 229 498-877 69-323 (329)
177 2xdw_A Prolyl endopeptidase; a 99.6 2.7E-14 9.2E-19 173.4 28.7 127 478-604 126-268 (710)
178 2xdw_A Prolyl endopeptidase; a 99.6 1.3E-13 4.4E-18 167.4 28.9 177 408-604 123-320 (710)
179 2mad_H Methylamine dehydrogena 99.6 1.9E-12 6.6E-17 143.9 35.8 145 416-606 27-197 (373)
180 3e5z_A Putative gluconolactona 99.6 3.9E-13 1.3E-17 144.4 28.8 170 405-603 23-201 (296)
181 1qks_A Cytochrome CD1 nitrite 99.6 6.4E-12 2.2E-16 146.9 40.5 160 408-606 195-375 (567)
182 3dsm_A Uncharacterized protein 99.6 3.6E-13 1.2E-17 147.3 28.1 265 429-885 15-310 (328)
183 2gop_A Trilobed protease; beta 99.6 1.2E-13 4E-18 151.8 24.1 111 762-879 172-294 (347)
184 3fvz_A Peptidyl-glycine alpha- 99.6 4.8E-13 1.7E-17 146.3 28.2 161 409-583 23-250 (329)
185 2bkl_A Prolyl endopeptidase; m 99.6 9.8E-14 3.3E-18 168.1 24.7 161 407-604 118-304 (695)
186 3azo_A Aminopeptidase; POP fam 99.6 1.9E-13 6.5E-18 164.5 26.6 289 478-879 25-372 (662)
187 2z2n_A Virginiamycin B lyase; 99.6 1.2E-11 4.2E-16 132.0 37.9 280 403-878 8-297 (299)
188 3sjl_D Methylamine dehydrogena 99.6 1.4E-12 5E-17 143.3 30.8 297 415-886 38-373 (386)
189 2bkl_A Prolyl endopeptidase; m 99.6 8.1E-14 2.8E-18 168.8 21.7 117 478-595 122-248 (695)
190 1rwi_B Serine/threonine-protei 99.5 1.1E-12 3.7E-17 138.4 26.0 154 411-604 25-180 (270)
191 1q7f_A NHL, brain tumor CG1071 99.5 2.7E-12 9.1E-17 137.0 29.0 180 408-605 75-281 (286)
192 2dg1_A DRP35, lactonase; beta 99.5 6.2E-12 2.1E-16 137.2 30.8 168 402-603 37-212 (333)
193 3c75_H MADH, methylamine dehyd 99.5 2.9E-12 9.9E-17 143.5 27.0 290 419-883 82-409 (426)
194 3dsm_A Uncharacterized protein 99.5 7E-12 2.4E-16 137.0 28.6 151 410-604 44-212 (328)
195 1yr2_A Prolyl oligopeptidase; 99.5 1.1E-12 3.9E-17 159.9 23.8 126 478-604 164-303 (741)
196 1yr2_A Prolyl oligopeptidase; 99.5 3.1E-12 1.1E-16 156.0 26.9 172 410-604 163-350 (741)
197 3no2_A Uncharacterized protein 99.5 7.5E-12 2.6E-16 133.1 24.3 237 487-885 4-261 (276)
198 2qc5_A Streptogramin B lactona 99.4 5.3E-10 1.8E-14 119.3 37.1 157 404-602 14-174 (300)
199 2qe8_A Uncharacterized protein 99.4 2E-11 6.8E-16 134.3 24.1 159 410-600 17-193 (343)
200 3e5z_A Putative gluconolactona 99.4 4.6E-11 1.6E-15 128.1 25.7 209 378-605 27-287 (296)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 3.7E-11 1.3E-15 129.5 25.2 111 763-877 174-300 (314)
202 2mad_H Methylamine dehydrogena 99.4 7.6E-10 2.6E-14 122.9 35.5 153 414-604 70-243 (373)
203 3no2_A Uncharacterized protein 99.4 7.8E-11 2.7E-15 125.2 25.5 190 385-592 10-231 (276)
204 1rwi_B Serine/threonine-protei 99.4 5.3E-11 1.8E-15 125.4 23.0 184 408-607 65-267 (270)
205 3hrp_A Uncharacterized protein 99.3 2.8E-10 9.5E-15 128.2 29.3 153 410-603 131-297 (409)
206 3sjl_D Methylamine dehydrogena 99.3 2.6E-10 8.7E-15 125.4 27.5 157 414-605 82-257 (386)
207 1mda_H Methylamine dehydrogena 99.3 1.3E-10 4.6E-15 127.9 24.5 80 804-886 268-356 (368)
208 3iuj_A Prolyl endopeptidase; h 99.3 1.1E-10 3.7E-15 141.1 23.6 172 407-604 126-314 (693)
209 2z2n_A Virginiamycin B lyase; 99.3 8.4E-09 2.9E-13 109.8 34.9 211 407-637 54-292 (299)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 6.9E-10 2.4E-14 119.5 26.2 216 406-637 14-296 (314)
211 3g4e_A Regucalcin; six bladed 99.3 2.1E-09 7.3E-14 115.3 29.7 168 402-603 5-179 (297)
212 3c75_H MADH, methylamine dehyd 99.2 1.7E-09 5.8E-14 121.0 27.5 155 414-604 122-295 (426)
213 3q7m_A Lipoprotein YFGL, BAMB; 99.2 6E-09 2E-13 115.7 31.0 154 420-608 52-211 (376)
214 1kb0_A Quinohemoprotein alcoho 99.2 1.2E-09 4.2E-14 131.0 27.0 66 826-892 458-523 (677)
215 1xip_A Nucleoporin NUP159; bet 99.2 3.7E-10 1.3E-14 124.6 20.5 165 377-591 36-231 (388)
216 2ghs_A AGR_C_1268P; regucalcin 99.2 1.8E-08 6.2E-13 109.6 32.1 156 408-603 47-209 (326)
217 3dr2_A Exported gluconolactona 99.2 2.5E-09 8.7E-14 115.2 24.8 100 763-870 190-301 (305)
218 1kb0_A Quinohemoprotein alcoho 99.2 7.6E-09 2.6E-13 124.1 31.0 203 380-608 77-350 (677)
219 1yiq_A Quinohemoprotein alcoho 99.2 2E-09 6.7E-14 129.4 25.8 67 826-893 456-522 (689)
220 2qc5_A Streptogramin B lactona 99.2 4.8E-08 1.7E-12 103.9 33.7 205 407-629 59-289 (300)
221 3dr2_A Exported gluconolactona 99.1 4.3E-09 1.5E-13 113.3 24.1 218 405-636 40-302 (305)
222 1fwx_A Nitrous oxide reductase 99.1 1.2E-09 4.3E-14 124.7 17.2 335 423-884 17-439 (595)
223 1xip_A Nucleoporin NUP159; bet 99.1 1.3E-09 4.5E-14 120.3 15.8 175 411-627 39-229 (388)
224 1mda_H Methylamine dehydrogena 99.1 1.8E-09 6.1E-14 118.9 16.8 85 766-855 269-366 (368)
225 4a2l_A BT_4663, two-component 99.0 4.8E-06 1.6E-10 102.0 48.3 385 410-879 88-529 (795)
226 1yiq_A Quinohemoprotein alcoho 99.0 4.5E-08 1.5E-12 117.6 29.2 204 380-608 70-342 (689)
227 3hrp_A Uncharacterized protein 99.0 4.8E-08 1.6E-12 109.8 27.3 188 378-606 130-356 (409)
228 3g4e_A Regucalcin; six bladed 99.0 9.3E-08 3.2E-12 102.4 27.7 182 408-625 52-255 (297)
229 2ece_A 462AA long hypothetical 99.0 7.9E-08 2.7E-12 106.2 27.3 115 482-605 87-238 (462)
230 4a2l_A BT_4663, two-component 99.0 8.7E-06 3E-10 99.7 47.1 180 409-606 214-438 (795)
231 2hz6_A Endoplasmic reticulum t 99.0 1.3E-11 4.4E-16 137.2 -5.0 142 420-607 8-152 (369)
232 2hz6_A Endoplasmic reticulum t 99.0 4.2E-11 1.5E-15 133.0 -1.2 104 487-606 8-113 (369)
233 3q7m_A Lipoprotein YFGL, BAMB; 99.0 1.7E-07 6E-12 103.8 27.8 107 772-885 239-346 (376)
234 2qe8_A Uncharacterized protein 99.0 3.7E-08 1.3E-12 108.0 21.9 188 407-626 64-305 (343)
235 3hxj_A Pyrrolo-quinoline quino 98.9 1.4E-08 4.7E-13 110.1 17.4 108 763-879 217-327 (330)
236 3iuj_A Prolyl endopeptidase; h 98.9 2.6E-08 8.9E-13 120.2 21.1 207 383-606 133-407 (693)
237 1npe_A Nidogen, entactin; glyc 98.9 1.2E-06 4E-11 92.0 30.9 112 478-602 37-153 (267)
238 2ece_A 462AA long hypothetical 98.9 1.1E-07 3.7E-12 105.2 23.4 209 419-630 93-399 (462)
239 2ghs_A AGR_C_1268P; regucalcin 98.9 6.3E-07 2.2E-11 97.3 29.2 158 408-603 88-259 (326)
240 1kv9_A Type II quinohemoprotei 98.9 1.3E-07 4.5E-12 113.1 25.8 67 826-893 439-505 (668)
241 2ad6_A Methanol dehydrogenase 98.9 3.6E-07 1.2E-11 107.2 27.2 66 826-892 445-510 (571)
242 3v9f_A Two-component system se 98.9 0.00022 7.7E-09 86.9 53.3 210 410-637 66-339 (781)
243 1w6s_A Methanol dehydrogenase 98.9 5.8E-07 2E-11 105.4 28.5 67 826-893 454-520 (599)
244 1w6s_A Methanol dehydrogenase 98.8 3.4E-06 1.2E-10 98.8 31.9 171 414-609 110-347 (599)
245 1kv9_A Type II quinohemoprotei 98.8 4.3E-06 1.5E-10 100.0 32.5 165 420-608 116-337 (668)
246 1fwx_A Nitrous oxide reductase 98.8 2.6E-07 9E-12 105.6 20.2 177 414-604 89-361 (595)
247 1flg_A Protein (quinoprotein e 98.7 4.5E-06 1.5E-10 97.9 30.6 67 826-893 467-533 (582)
248 4a0p_A LRP6, LRP-6, low-densit 98.7 0.00062 2.1E-08 80.3 48.9 182 409-606 36-239 (628)
249 2iwa_A Glutamine cyclotransfer 98.7 1.8E-06 6E-11 89.9 23.0 188 410-639 21-236 (266)
250 3s94_A LRP-6, low-density lipo 98.7 0.00026 9.1E-09 83.4 44.3 183 408-606 38-245 (619)
251 3v9f_A Two-component system se 98.6 0.0013 4.4E-08 80.1 50.2 177 410-605 163-393 (781)
252 2ad6_A Methanol dehydrogenase 98.6 1.8E-05 6.3E-10 92.5 31.5 165 420-609 114-340 (571)
253 3nol_A Glutamine cyclotransfer 98.6 2.1E-06 7.2E-11 88.2 19.0 154 410-607 43-204 (262)
254 1npe_A Nidogen, entactin; glyc 98.6 3.8E-05 1.3E-09 80.4 29.4 180 410-607 36-241 (267)
255 1flg_A Protein (quinoprotein e 98.6 8.6E-05 2.9E-09 87.0 34.9 78 780-861 464-544 (582)
256 2xe4_A Oligopeptidase B; hydro 98.6 7.2E-06 2.4E-10 99.6 26.0 145 411-593 175-339 (751)
257 2fp8_A Strictosidine synthase; 98.6 1.2E-05 4.1E-10 86.9 25.2 112 764-878 188-315 (322)
258 2iwa_A Glutamine cyclotransfer 98.5 4.4E-06 1.5E-10 86.9 20.5 113 479-606 23-137 (266)
259 3s94_A LRP-6, low-density lipo 98.5 0.0018 6.2E-08 76.2 43.6 364 478-878 85-469 (619)
260 3nok_A Glutaminyl cyclase; bet 98.5 1.3E-05 4.3E-10 82.5 20.6 155 409-607 54-213 (268)
261 3mbr_X Glutamine cyclotransfer 98.4 6.7E-05 2.3E-09 76.4 25.6 176 408-626 19-218 (243)
262 2fp8_A Strictosidine synthase; 98.4 3.6E-05 1.2E-09 83.1 25.3 181 405-603 14-268 (322)
263 3nol_A Glutamine cyclotransfer 98.4 1.3E-05 4.5E-10 82.3 19.8 112 478-606 44-157 (262)
264 2p4o_A Hypothetical protein; p 98.4 0.00026 8.8E-09 75.7 30.0 59 478-537 33-91 (306)
265 1k3i_A Galactose oxidase precu 98.4 9.5E-06 3.3E-10 97.0 20.3 120 414-566 190-327 (656)
266 3qqz_A Putative uncharacterize 98.3 0.00017 5.8E-09 74.4 25.6 183 404-602 21-251 (255)
267 3hxj_A Pyrrolo-quinoline quino 98.3 4.6E-05 1.6E-09 81.9 21.0 104 478-602 178-282 (330)
268 3nok_A Glutaminyl cyclase; bet 98.2 3.5E-05 1.2E-09 79.2 17.4 111 478-606 56-166 (268)
269 3v65_B Low-density lipoprotein 98.2 0.00081 2.8E-08 74.5 29.9 107 481-602 81-188 (386)
270 2xe4_A Oligopeptidase B; hydro 98.2 3.6E-05 1.2E-09 93.4 20.1 111 763-874 273-396 (751)
271 3tc9_A Hypothetical hydrolase; 98.2 0.0002 7E-09 80.5 24.4 128 411-540 138-292 (430)
272 3mbr_X Glutamine cyclotransfer 98.2 0.00017 6E-09 73.3 21.1 112 478-606 22-135 (243)
273 3v64_C Agrin; beta propeller, 98.1 0.0032 1.1E-07 68.5 32.7 109 480-603 37-146 (349)
274 2p4o_A Hypothetical protein; p 98.1 0.00093 3.2E-08 71.3 27.4 196 410-624 32-270 (306)
275 3v65_B Low-density lipoprotein 98.1 0.0015 5E-08 72.4 29.5 182 409-605 115-319 (386)
276 4hw6_A Hypothetical protein, I 98.1 0.00044 1.5E-08 77.8 25.2 177 410-602 139-372 (433)
277 1ijq_A LDL receptor, low-densi 98.1 0.0039 1.3E-07 66.8 31.7 99 491-603 4-107 (316)
278 3tc9_A Hypothetical hydrolase; 98.1 0.00066 2.3E-08 76.3 26.2 116 477-604 137-257 (430)
279 2xbg_A YCF48-like protein; pho 98.1 0.0085 2.9E-07 64.5 34.1 103 763-873 207-319 (327)
280 3ei3_A DNA damage-binding prot 98.1 0.022 7.6E-07 71.7 41.9 99 772-875 844-954 (1158)
281 3v64_C Agrin; beta propeller, 98.1 0.0027 9.3E-08 69.1 29.8 182 409-605 72-276 (349)
282 1ijq_A LDL receptor, low-densi 98.0 0.0053 1.8E-07 65.7 30.9 182 408-606 28-240 (316)
283 4hw6_A Hypothetical protein, I 98.0 0.00072 2.5E-08 76.1 24.9 62 475-537 137-200 (433)
284 3kya_A Putative phosphatase; s 98.0 0.0044 1.5E-07 70.1 30.6 41 844-884 442-483 (496)
285 3p5b_L Low density lipoprotein 98.0 0.0069 2.3E-07 67.3 31.2 100 490-603 85-189 (400)
286 3m0c_C LDL receptor, low-densi 97.9 0.0064 2.2E-07 73.3 31.5 113 478-603 425-545 (791)
287 3p5b_L Low density lipoprotein 97.9 0.01 3.5E-07 65.9 31.0 185 407-606 109-322 (400)
288 3sov_A LRP-6, low-density lipo 97.8 0.0042 1.4E-07 66.6 25.5 182 410-606 35-240 (318)
289 1k3i_A Galactose oxidase precu 97.7 0.00043 1.5E-08 82.6 17.6 193 411-606 244-499 (656)
290 3sov_A LRP-6, low-density lipo 97.7 0.013 4.5E-07 62.7 27.5 77 802-882 168-244 (318)
291 3amr_A 3-phytase; beta-propell 97.7 0.0037 1.3E-07 66.9 22.5 112 478-603 129-262 (355)
292 3m0c_C LDL receptor, low-densi 97.7 0.014 4.7E-07 70.4 30.3 184 407-606 421-634 (791)
293 2p9w_A MAL S 1 allergenic prot 97.6 0.0029 1E-07 67.1 20.2 169 405-603 8-214 (334)
294 4a0p_A LRP6, LRP-6, low-densit 97.6 0.2 6.9E-06 58.8 52.3 126 410-539 80-227 (628)
295 2ism_A Putative oxidoreductase 97.6 0.0095 3.3E-07 64.8 24.5 57 478-537 32-97 (352)
296 3qqz_A Putative uncharacterize 97.6 0.0086 2.9E-07 61.6 22.4 151 478-632 71-244 (255)
297 3a9g_A Putative uncharacterize 97.6 0.019 6.4E-07 62.5 26.0 213 409-628 28-328 (354)
298 1cru_A Protein (soluble quinop 97.5 0.058 2E-06 60.7 29.9 60 478-537 28-99 (454)
299 1n7d_A LDL receptor, low-densi 97.5 0.00066 2.3E-08 81.3 14.0 88 764-856 543-636 (699)
300 1n7d_A LDL receptor, low-densi 97.4 0.00061 2.1E-08 81.6 13.3 79 801-883 541-621 (699)
301 3ei3_A DNA damage-binding prot 97.4 0.53 1.8E-05 59.2 44.9 111 760-876 885-999 (1158)
302 3ott_A Two-component system se 97.4 0.46 1.6E-05 57.2 46.8 171 410-605 63-261 (758)
303 3das_A Putative oxidoreductase 97.4 0.16 5.6E-06 54.5 29.7 58 478-535 33-100 (347)
304 2ism_A Putative oxidoreductase 97.3 0.024 8.2E-07 61.6 23.0 93 378-471 30-153 (352)
305 3sbq_A Nitrous-oxide reductase 97.3 0.013 4.5E-07 65.6 20.2 113 423-539 72-198 (638)
306 3s25_A Hypothetical 7-bladed b 97.3 0.14 4.9E-06 54.1 27.8 86 498-604 88-176 (302)
307 2xbg_A YCF48-like protein; pho 97.2 0.03 1E-06 60.1 22.4 153 404-601 157-319 (327)
308 3a9g_A Putative uncharacterize 97.2 0.062 2.1E-06 58.4 24.7 94 378-471 28-153 (354)
309 2xzh_A Clathrin heavy chain 1; 97.2 0.33 1.1E-05 51.0 32.8 105 484-605 74-190 (365)
310 3das_A Putative oxidoreductase 97.1 0.15 5.3E-06 54.7 25.5 52 574-626 263-322 (347)
311 1bpo_A Protein (clathrin); cla 97.0 0.56 1.9E-05 51.2 31.9 70 807-880 266-335 (494)
312 2g8s_A Glucose/sorbosone dehyd 96.9 0.07 2.4E-06 57.9 22.0 55 574-628 271-339 (353)
313 2xn4_A Kelch-like protein 2; s 96.8 0.12 4.2E-06 54.3 22.2 27 855-881 250-281 (302)
314 3amr_A 3-phytase; beta-propell 96.7 0.06 2.1E-06 57.5 18.4 146 420-602 39-208 (355)
315 3sre_A PON1, serum paraoxonase 96.7 0.15 5.2E-06 55.0 21.9 104 477-594 165-287 (355)
316 2vpj_A Kelch-like protein 12; 96.7 0.098 3.4E-06 55.0 20.4 74 809-882 205-284 (301)
317 3pbp_A Nucleoporin NUP82; beta 96.6 0.079 2.7E-06 57.8 18.1 145 486-637 30-209 (452)
318 3s25_A Hypothetical 7-bladed b 96.5 0.25 8.5E-06 52.2 22.0 103 483-606 110-218 (302)
319 3pbp_A Nucleoporin NUP82; beta 96.5 0.095 3.3E-06 57.2 18.3 169 418-600 29-208 (452)
320 3kya_A Putative phosphatase; s 96.5 0.1 3.5E-06 58.9 19.3 63 478-540 248-332 (496)
321 3ii7_A Kelch-like protein 7; p 96.5 0.22 7.6E-06 52.4 21.3 27 856-882 247-278 (306)
322 2g8s_A Glucose/sorbosone dehyd 96.3 0.72 2.4E-05 49.8 24.6 92 380-472 19-149 (353)
323 1zgk_A Kelch-like ECH-associat 96.0 0.61 2.1E-05 49.0 21.5 71 810-882 215-293 (308)
324 2vpj_A Kelch-like protein 12; 95.9 0.11 3.7E-06 54.7 15.2 174 419-605 61-279 (301)
325 2p9w_A MAL S 1 allergenic prot 95.8 0.98 3.3E-05 47.8 21.6 112 411-540 64-207 (334)
326 2xn4_A Kelch-like protein 2; s 95.8 0.34 1.2E-05 50.8 18.5 172 420-605 61-277 (302)
327 4asc_A Kelch repeat and BTB do 95.8 2.1 7.3E-05 44.9 24.8 44 491-537 8-54 (315)
328 3sre_A PON1, serum paraoxonase 95.7 1.6 5.6E-05 46.8 23.6 130 409-538 111-287 (355)
329 2xzh_A Clathrin heavy chain 1; 95.6 2.7 9.2E-05 44.2 26.7 166 414-608 71-294 (365)
330 3ott_A Two-component system se 95.6 5.6 0.00019 47.5 49.6 203 410-636 103-348 (758)
331 3ii7_A Kelch-like protein 7; p 95.6 0.2 6.8E-06 52.7 15.5 172 420-605 55-273 (306)
332 3sbq_A Nitrous-oxide reductase 95.4 0.27 9.1E-06 55.3 16.1 74 800-877 323-409 (638)
333 1cru_A Protein (soluble quinop 95.3 1.4 4.8E-05 49.3 22.1 55 409-463 26-87 (454)
334 2wg3_C Hedgehog-interacting pr 95.2 2.6 8.9E-05 47.1 24.0 20 478-497 140-159 (463)
335 1bpo_A Protein (clathrin); cla 95.2 4.5 0.00015 44.2 30.9 128 414-581 70-206 (494)
336 1tl2_A L10, protein (tachylect 94.9 0.31 1.1E-05 48.3 13.1 140 478-637 42-207 (236)
337 2uvk_A YJHT; unknown function, 94.8 1.6 5.4E-05 46.8 20.4 58 826-885 286-351 (357)
338 1tl2_A L10, protein (tachylect 94.7 0.85 2.9E-05 45.1 15.6 81 454-540 42-155 (236)
339 2woz_A Kelch repeat and BTB do 94.3 6 0.0002 41.4 24.3 72 809-882 205-293 (318)
340 4asc_A Kelch repeat and BTB do 94.2 1.3 4.5E-05 46.6 17.6 96 487-594 148-253 (315)
341 2woz_A Kelch repeat and BTB do 94.2 1.9 6.4E-05 45.4 18.8 168 414-594 50-263 (318)
342 2wg3_C Hedgehog-interacting pr 94.2 8.6 0.0003 42.9 24.9 65 409-474 68-160 (463)
343 2be1_A Serine/threonine-protei 94.1 0.2 6.7E-06 53.7 10.4 145 422-601 11-181 (339)
344 1suu_A DNA gyrase subunit A; t 93.8 3.3 0.00011 43.6 19.4 111 487-604 113-231 (312)
345 1zgk_A Kelch-like ECH-associat 93.6 0.6 2.1E-05 49.1 13.3 172 420-605 70-288 (308)
346 3l6v_A GYRA, DNA gyrase subuni 93.5 9.9 0.00034 40.9 24.2 58 487-544 112-176 (370)
347 2zwa_A Leucine carboxyl methyl 92.8 3.6 0.00012 48.7 19.7 180 419-606 396-637 (695)
348 1zi0_A DNA gyrase subunit A; b 92.4 12 0.00041 39.1 22.3 111 487-604 108-226 (307)
349 1xi4_A Clathrin heavy chain; a 92.1 7 0.00024 49.2 20.9 92 484-592 73-169 (1630)
350 3uc1_A DNA gyrase subunit A; D 91.9 5.3 0.00018 42.3 17.7 114 409-541 94-221 (327)
351 3no0_A DNA gyrase subunit A; D 90.9 16 0.00054 37.6 21.7 185 410-604 24-246 (276)
352 3uc1_A DNA gyrase subunit A; D 90.7 13 0.00044 39.3 19.1 107 487-605 108-229 (327)
353 4gq2_M Nucleoporin NUP120; bet 89.3 3.7 0.00013 50.5 15.4 39 477-515 236-274 (950)
354 1wp5_A Topoisomerase IV; broke 88.8 8 0.00027 40.8 15.6 110 488-604 106-225 (323)
355 2uvk_A YJHT; unknown function, 88.7 5.4 0.00018 42.5 14.7 52 554-607 286-345 (357)
356 4gq2_M Nucleoporin NUP120; bet 86.1 30 0.001 42.4 20.7 81 528-608 180-270 (950)
357 3b7f_A Glycosyl hydrolase, BNR 85.5 43 0.0015 35.9 21.1 60 479-539 179-254 (394)
358 3l6v_A GYRA, DNA gyrase subuni 83.6 51 0.0017 35.3 23.8 109 485-605 4-133 (370)
359 3no0_A DNA gyrase subunit A; D 83.1 44 0.0015 34.2 17.8 158 380-540 35-236 (276)
360 3q6k_A 43.2 kDa salivary prote 83.0 54 0.0019 35.2 24.1 166 409-604 86-306 (381)
361 1suu_A DNA gyrase subunit A; t 82.9 48 0.0017 34.5 21.5 64 478-541 152-224 (312)
362 2be1_A Serine/threonine-protei 81.9 2.3 8E-05 45.3 7.2 110 773-886 11-140 (339)
363 1zi0_A DNA gyrase subunit A; b 81.9 52 0.0018 34.2 20.6 129 412-540 44-218 (307)
364 1sqj_A OXG-RCBH, oligoxylogluc 76.0 1.1E+02 0.0037 36.5 20.2 127 409-538 14-190 (789)
365 1xi4_A Clathrin heavy chain; a 75.7 36 0.0012 43.0 15.7 36 574-609 259-294 (1630)
366 1zvt_A Topoisomerase IV subuni 72.6 44 0.0015 33.7 13.4 64 478-541 85-156 (256)
367 3f7f_A Nucleoporin NUP120; nuc 72.6 70 0.0024 37.3 16.4 37 411-449 223-259 (729)
368 1wp5_A Topoisomerase IV; broke 71.2 1E+02 0.0036 32.1 21.7 60 481-540 148-217 (323)
369 4hvt_A Ritya.17583.B, post-pro 69.2 1.8E+02 0.0061 34.1 23.8 72 761-833 350-429 (711)
370 3b7f_A Glycosyl hydrolase, BNR 66.0 1.4E+02 0.0048 31.7 31.6 22 519-540 116-139 (394)
371 2zwa_A Leucine carboxyl methyl 65.5 84 0.0029 36.8 15.8 106 771-878 451-579 (695)
372 4fhn_B Nucleoporin NUP120; pro 64.5 26 0.00089 44.0 11.7 42 847-888 239-280 (1139)
373 4fhn_B Nucleoporin NUP120; pro 64.1 20 0.00068 45.1 10.5 40 477-516 238-277 (1139)
374 3qhy_B Beta-lactamase inhibito 63.8 54 0.0019 33.5 12.2 56 380-439 33-89 (282)
375 3zwu_A Alkaline phosphatase PH 60.1 19 0.00067 41.2 8.5 58 411-468 477-546 (592)
376 3f7f_A Nucleoporin NUP120; nuc 56.8 26 0.0009 40.8 8.8 38 847-886 223-260 (729)
377 3zwu_A Alkaline phosphatase PH 54.1 26 0.0009 40.1 8.3 60 477-536 476-549 (592)
378 3q6k_A 43.2 kDa salivary prote 51.3 2.5E+02 0.0086 29.9 19.8 87 410-504 152-250 (381)
379 4a9v_A PHOX; hydrolase, beta-p 49.3 56 0.0019 37.1 9.7 62 476-537 475-550 (592)
380 4hvt_A Ritya.17583.B, post-pro 47.3 26 0.00089 41.3 7.0 77 806-882 136-231 (711)
381 3kci_A Probable E3 ubiquitin-p 46.9 2.9E+02 0.0098 29.3 23.4 127 379-505 61-239 (389)
382 4a9v_A PHOX; hydrolase, beta-p 46.5 56 0.0019 37.0 9.1 58 410-467 476-545 (592)
383 3m7h_A Putidacin L1; monocot m 41.6 2.4E+02 0.0081 28.5 12.5 23 412-438 111-133 (276)
384 3a0f_A Xyloglucanase; beta-pro 40.9 5E+02 0.017 30.4 18.2 31 407-437 18-49 (763)
385 1zvu_A Topoisomerase IV subuni 35.7 2.2E+02 0.0077 32.9 12.0 64 478-541 555-626 (716)
386 3hx6_A Type 4 fimbrial biogene 35.0 5E+02 0.017 29.2 14.5 53 554-606 224-286 (570)
387 1sqj_A OXG-RCBH, oligoxylogluc 33.1 6E+02 0.021 29.9 16.1 108 478-594 65-190 (789)
388 3a0c_A Mannose/sialic acid-bin 31.2 2.4E+02 0.0082 23.8 9.8 24 413-439 22-45 (110)
389 4h3o_A Lectin; cadmium, plant 30.7 2.3E+02 0.0078 23.8 8.7 13 457-469 54-66 (105)
390 3mez_B Mannose-specific lectin 29.5 2.6E+02 0.009 23.7 9.2 42 456-504 59-105 (113)
391 3llp_A Fascin; beta-trefoil, a 29.1 6.2E+02 0.021 27.9 30.2 17 583-599 226-242 (493)
392 1zvt_A Topoisomerase IV subuni 26.5 4.8E+02 0.017 25.8 14.3 53 454-506 85-162 (256)
393 1b2p_A Protein (lectin); manno 22.9 3.6E+02 0.012 23.1 10.5 13 457-469 64-76 (119)
394 3kci_A Probable E3 ubiquitin-p 21.8 7.1E+02 0.024 26.1 26.6 113 487-604 167-293 (389)
395 3dzw_A Agglutinin; lectin, man 21.8 3.6E+02 0.012 22.6 8.5 77 413-504 21-98 (109)
396 3mvd_K Regulator of chromosome 20.1 7.9E+02 0.027 26.0 27.6 29 574-604 294-322 (423)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.6e-48 Score=464.06 Aligned_cols=458 Identities=14% Similarity=0.178 Sum_probs=340.5
Q ss_pred cceeeeeccCccEEEecCCCeEEE----------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC--eEEEEe
Q psy10063 380 VDRLNSMSPAARKLATNAEPVVKM----------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG--RELESI 447 (894)
Q Consensus 380 ~~~~~~~s~dg~~l~~~~~~~~~~----------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg--~~~~~l 447 (894)
....++|+|||++|+.+....+++ .+.+|.+.|.+++|+|||++||+|+.||.|+|||+..+ ..+..+
T Consensus 20 ~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~ 99 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTI 99 (611)
T ss_dssp CCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEE
T ss_pred ceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEee
Confidence 344567999999998876554333 57799999999999999999999999999999999754 346678
Q ss_pred cCCCCCCeeEEEEcCCCCEEEEEeCCC--------------------CccceEEEEEecCCC-EEEEEECCCCEEEEEcC
Q psy10063 448 SGHAKEPINDMQFSKDATMFITASHSQ--------------------AVEPINDMQFSKDAT-MFITASKDHTAKLFTTH 506 (894)
Q Consensus 448 ~~h~~~~V~~v~~spdg~~la~~~~d~--------------------~i~~V~~l~~spdg~-~L~sgs~Dg~V~iwdl~ 506 (894)
.+|.+ .|.+++|+|||++|++++.+. +.+.|.+++|+|++. +|++|+.|+.|+|||++
T Consensus 100 ~~~~~-~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~ 178 (611)
T 1nr0_A 100 PVFSG-PVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP 178 (611)
T ss_dssp ECSSS-CEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT
T ss_pred cccCC-ceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC
Confidence 88988 999999999999999888642 226899999999987 69999999999999999
Q ss_pred CCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc-------CCCCCeEE
Q psy10063 507 DRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK-------GHFGPINS 578 (894)
Q Consensus 507 ~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~-------~h~~~V~~ 578 (894)
.++++..+.. ...|.+++|+|+|++|++++.|+. |++||+..++++..+. +|.+.|.+
T Consensus 179 ~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~--------------i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~ 244 (611)
T 1nr0_A 179 PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT--------------IVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244 (611)
T ss_dssp TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--------------EEEEETTTCCEEEECBCTTSSSCSSSSCEEE
T ss_pred CCeEeeeeccccCceEEEEECCCCCEEEEEECCCc--------------EEEEECCCCcEeeeeccccccccccCCCEEE
Confidence 9999888874 578999999999999999999997 8999999998888874 79999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCcccc-----------------------------------------------CC
Q psy10063 579 LAFHPDGKSYASGGEDGFLISNTLSNGLDIS-----------------------------------------------EG 611 (894)
Q Consensus 579 l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~-----------------------------------------------~~ 611 (894)
++|+|+|++|++++.|+.|+|||++.++.+. +.
T Consensus 245 v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~ 324 (611)
T 1nr0_A 245 LTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHN 324 (611)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCS
T ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCC
Confidence 9999999999999999999999998765321 22
Q ss_pred CceeeeEECcCCcEE--EecCCeEEEEecccCCC-----------------CCCCeeeeccccCCCceEEechhhHHHhh
Q psy10063 612 SFTSSSTQQPDGLVY--PSQGGHIHSLSSHSTSS-----------------TDTGGVFSGSRVDDSGVELTKDEQIEMAR 672 (894)
Q Consensus 612 ~~v~~~~~spdg~~l--~~~~g~i~~~~~~~~~~-----------------~d~~~i~sgs~~~d~~i~l~~~~~~~~~~ 672 (894)
..+.+++|+|+|.++ .+.++.+..|+...... .....+++++ .++.+++|+........
T Consensus 325 ~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s--~d~~v~~w~~~~~~~~~ 402 (611)
T 1nr0_A 325 KAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVS--WDDHLKVVPAGGSGVDS 402 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEE--TTTEEEEECSSSSSSCT
T ss_pred CCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEE--cCCceEEeecCCccccc
Confidence 345667777777666 34456666665422100 0122344444 56667777644321110
Q ss_pred hc------------ccccCCCCeEEeeccCCcceeEeccCcce-----eEEeeeEEEcCCCCEEEecccCccccccCCcc
Q psy10063 673 NR------------MSINHSGTRLHVNPFDEQQSVELTKDEQI-----EMARNRMSINHSGTRLHVNPFDEQQSVDASPL 735 (894)
Q Consensus 673 ~~------------~~~~~~g~~~~~~~~~~~~~~~~s~~~~~-----~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l 735 (894)
.. +.+..++..+..... ..+.+...+++ ......++++++|+.++.+..+.. +
T Consensus 403 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~---~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~-------v 472 (611)
T 1nr0_A 403 SKAVANKLSSQPLGLAVSADGDIAVAACY---KHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSK-------V 472 (611)
T ss_dssp TSCCEEECSSCEEEEEECTTSSCEEEEES---SEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSE-------E
T ss_pred cceeeeecCCCCcEEEEeCCCcEEEEEeC---ceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCe-------E
Confidence 00 000011111110000 00001101110 011235788899998888776554 6
Q ss_pred eeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC-Cceeec-----cccCCCceEeec
Q psy10063 736 MTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK-NKATAG-----FLLSCPDFLFDF 809 (894)
Q Consensus 736 ~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~-~~~~~~-----~~~~~~~~~fS~ 809 (894)
++|+...+... .... .+|...|.+|+|+|++++||+++.|+.|++|++.. ++.+.. +...+..++|+|
T Consensus 473 ~lwd~~~~~~~-----~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fsp 546 (611)
T 1nr0_A 473 HVYKLSGASVS-----EVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP 546 (611)
T ss_dssp EEEEEETTEEE-----EEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECT
T ss_pred EEEEccCCcee-----eeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECC
Confidence 77765433211 0112 57899999999999999999999999999999987 444332 344556788999
Q ss_pred CCCeEEEEecCCCCceeEEEeecCCcc-ee-eeccCC-CCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063 810 DTTREVTTTSTKVGKFDARFYHLIFEE-EF-ARIKGH-FGPINSLAFHPDGKSYASGGEDGFVRLHTFD 875 (894)
Q Consensus 810 dg~~l~~as~d~~g~~~I~vwd~~tg~-~l-~~l~gH-~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~ 875 (894)
||++|++++.|+ .|+|||+..++ ++ ..+.+| .+.|.+|+|+||++ |++++.|+.|+||++.
T Consensus 547 dg~~lasgs~D~----~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 547 DNVRLATGSLDN----SVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp TSSEEEEEETTS----CEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred CCCEEEEEECCC----cEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEecc
Confidence 999999999998 59999998875 33 677899 89999999999999 9999999999999983
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.5e-46 Score=444.24 Aligned_cols=454 Identities=21% Similarity=0.300 Sum_probs=348.1
Q ss_pred CCCccceeeeeccCccEEEecCCC-e---------EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063 376 SPLSVDRLNSMSPAARKLATNAEP-V---------VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE 445 (894)
Q Consensus 376 ~~~~~~~~~~~s~dg~~l~~~~~~-~---------~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~ 445 (894)
.+.+....++|+|||++|+.++.+ . +...|.+|.+.|.+|+|+|||++||+++.|+.|+|||+ ++++++
T Consensus 14 GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~ 92 (577)
T 2ymu_A 14 AHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQ 92 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEE
Confidence 344556678899999999877543 2 33478899999999999999999999999999999996 588899
Q ss_pred EecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------------------------------------------
Q psy10063 446 SISGHAKEPINDMQFSKDATMFITASHSQAV------------------------------------------------- 476 (894)
Q Consensus 446 ~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------------------------------------------------- 476 (894)
.+.+|.. .|.+++|+|++++|++++.++.+
T Consensus 93 ~~~~~~~-~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (577)
T 2ymu_A 93 TLTGHSS-SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ 171 (577)
T ss_dssp EECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSC
T ss_pred EEECCCC-CEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceecccccee
Confidence 9999998 99999999999999999988755
Q ss_pred ---------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063 477 ---------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTT 546 (894)
Q Consensus 477 ---------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~ 546 (894)
..|.+++|+|++++|++++.|+.|+|||. .++++..+. +...|.+++|+|++++|++++.++.
T Consensus 172 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~------ 244 (577)
T 2ymu_A 172 LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT------ 244 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC------
T ss_pred eeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCE------
Confidence 36788999999999999999999999996 566776666 5688999999999999999999997
Q ss_pred cCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc---ccCCCceeeeEECcCC
Q psy10063 547 STKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD---ISEGSFTSSSTQQPDG 623 (894)
Q Consensus 547 ~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~---~~~~~~v~~~~~spdg 623 (894)
|++||.. ++.+..+.+|...|.+++|+|++++|++++.|+.|++|+...... ..+...+..++|+|++
T Consensus 245 --------i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~ 315 (577)
T 2ymu_A 245 --------VKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDG 315 (577)
T ss_dssp --------EEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTS
T ss_pred --------EEEEeCC-CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCC
Confidence 7888854 677888899999999999999999999999999999999765431 1245678889999999
Q ss_pred cEEE--ecCCeEEEEecccC----------------CCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEE
Q psy10063 624 LVYP--SQGGHIHSLSSHST----------------SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLH 685 (894)
Q Consensus 624 ~~l~--~~~g~i~~~~~~~~----------------~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~ 685 (894)
..++ ..++.+..|..... ..+++..+++++ .++.+++|+...... .....+.+....
T Consensus 316 ~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~--~dg~v~~~~~~~~~~---~~~~~~~~~v~~ 390 (577)
T 2ymu_A 316 QTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASAS--DDKTVKLWNRNGQLL---QTLTGHSSSVRG 390 (577)
T ss_dssp SEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTCCEE---EEEECCSSCEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEe--CCCEEEEEcCCCCEE---EEecCCCCCeEE
Confidence 8774 44566666643110 134666777776 678899987432111 011112221111
Q ss_pred ee-ccCCcceeEeccCcceeEE----------------eeeEEEcCCCCEEEecccCccccccCCcceeeccccCccccc
Q psy10063 686 VN-PFDEQQSVELTKDEQIEMA----------------RNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKL 748 (894)
Q Consensus 686 ~~-~~~~~~~~~~s~~~~~~~~----------------~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~ 748 (894)
+. ..++...+....++.+.++ ...+.+++++..++....+.. +++|+ .
T Consensus 391 ~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~-------v~~w~--------~ 455 (577)
T 2ymu_A 391 VAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT-------VKLWN--------R 455 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-------EEEEE--------T
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE-------EEEEE--------C
Confidence 11 1112222222222221111 123566667766666544432 55553 3
Q ss_pred CCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee---ccccCCCceEeecCCCeEEEEecCCCCce
Q psy10063 749 DGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA---GFLLSCPDFLFDFDTTREVTTTSTKVGKF 825 (894)
Q Consensus 749 dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~ 825 (894)
.++.+..+.+|...|.+++|+|++++||+++.|+.|+||+. .++.+. .+...+..++|+|||++|++++.|+
T Consensus 456 ~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg---- 530 (577)
T 2ymu_A 456 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK---- 530 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTS----
T ss_pred CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcC----
Confidence 44555677889999999999999999999999999999995 444443 3344566788999999999999887
Q ss_pred eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063 826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHT 873 (894)
Q Consensus 826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd 873 (894)
.|+|||+ .++++..+.+|.+.|.+|+|+|||++|+++|.||.|+|||
T Consensus 531 ~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 531 TVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 6999996 5889999999999999999999999999999999999997
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.3e-44 Score=426.06 Aligned_cols=454 Identities=19% Similarity=0.284 Sum_probs=331.7
Q ss_pred EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc----
Q psy10063 401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV---- 476 (894)
Q Consensus 401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i---- 476 (894)
.+..|+||.+.|.||+|||||++||+|+.|+.|+|||. ++++++.|.+|.. .|.+|+|+|||++|++++.|+.+
T Consensus 8 e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~-~V~~l~fspdg~~las~~~d~~i~vWd 85 (577)
T 2ymu_A 8 ERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-SVWGVAFSPDGQTIASASDDKTVKLWN 85 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCC-CEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 44579999999999999999999999999999999995 6899999999998 99999999999999999999876
Q ss_pred -------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEE
Q psy10063 477 -------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREV 543 (894)
Q Consensus 477 -------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v 543 (894)
..|.+++|+|++++|++++.|+.+++|+...........+...+.++.|++++..++.++.++.+.+
T Consensus 86 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 165 (577)
T 2ymu_A 86 RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKL 165 (577)
T ss_dssp TTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceec
Confidence 5799999999999999999999999999775544433334455566666666655555555555544
Q ss_pred EeccCcc---------------------------ceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy10063 544 TTTSTKV---------------------------GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGF 596 (894)
Q Consensus 544 ~~~~~~~---------------------------~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~ 596 (894)
|...... ....|++||. .++.+..+.+|...|.+++|+|++++|++++.|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~ 244 (577)
T 2ymu_A 166 WNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 244 (577)
T ss_dssp ECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred cccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 4322110 0012889995 47788889999999999999999999999999999
Q ss_pred EEEEECCCCcc---ccCCCceeeeEECcCCcEEE--ecCCeEEEEeccc----------C------CCCCCCeeeecccc
Q psy10063 597 LISNTLSNGLD---ISEGSFTSSSTQQPDGLVYP--SQGGHIHSLSSHS----------T------SSTDTGGVFSGSRV 655 (894)
Q Consensus 597 I~vwdl~~~~~---~~~~~~v~~~~~spdg~~l~--~~~g~i~~~~~~~----------~------~~~d~~~i~sgs~~ 655 (894)
|++|+...... ..+...+..++|+|++..++ ..++.+..|.... . ..+++..+++++
T Consensus 245 i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~-- 322 (577)
T 2ymu_A 245 VKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASAS-- 322 (577)
T ss_dssp EEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEE--
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEe--
Confidence 99999764431 12456788999999998774 4455666554211 0 124566777776
Q ss_pred CCCceEEechhhHHHhhhcccccCCCCeEEeec-cCCcceeEeccCcceeEE----------------eeeEEEcCCCCE
Q psy10063 656 DDSGVELTKDEQIEMARNRMSINHSGTRLHVNP-FDEQQSVELTKDEQIEMA----------------RNRMSINHSGTR 718 (894)
Q Consensus 656 ~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~s~~~~~~~~----------------~~~~~~s~~g~~ 718 (894)
.++.+++|+....... ....+......+.. .++...+....++.+.++ ...++++++|+.
T Consensus 323 ~d~~i~~w~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~ 399 (577)
T 2ymu_A 323 DDKTVKLWNRNGQHLQ---TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQT 399 (577)
T ss_dssp TTSCEEEEETTSCEEE---EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSC
T ss_pred CCCeEEEEeCCCCeeE---EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCE
Confidence 6888999985432211 11111111111111 111111111122211111 133566667766
Q ss_pred EEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce--ee
Q psy10063 719 LHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA--TA 796 (894)
Q Consensus 719 l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~--~~ 796 (894)
++.+..+. .+++|+ ..++.+..+.+|...|.+++|+|++++|++++.|+.|++|+...... +.
T Consensus 400 l~~~~~d~-------~v~~~~--------~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~ 464 (577)
T 2ymu_A 400 IASASDDK-------TVKLWN--------RNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLT 464 (577)
T ss_dssp EEEEETTS-------EEEEEC--------TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEE
T ss_pred EEEEeCCC-------EEEEEe--------CCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEc
Confidence 66554433 245553 33455566788999999999999999999999999999999643322 33
Q ss_pred ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063 797 GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ 876 (894)
Q Consensus 797 ~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~ 876 (894)
.+...+..++|+||+++|++++.++ .|+|||. .++++..+.+|...|.+|+|+|||++||+++.||.|+|||+..
T Consensus 465 ~~~~~v~~~~~spd~~~las~~~d~----~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 465 GHSSSVRGVAFSPDGQTIASASDDK----TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp CCSSCEEEEEECTTSCEEEEEETTS----EEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCC----EEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 4445566788999999999999887 6999995 6889999999999999999999999999999999999999754
Q ss_pred ccccccc
Q psy10063 877 AYFDYTF 883 (894)
Q Consensus 877 ~~~~~~~ 883 (894)
+++..+
T Consensus 540 -~~~~~~ 545 (577)
T 2ymu_A 540 -QLLQTL 545 (577)
T ss_dssp -CEEEEE
T ss_pred -CEEEEE
Confidence 444444
No 4
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.7e-43 Score=421.82 Aligned_cols=439 Identities=15% Similarity=0.128 Sum_probs=310.5
Q ss_pred cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc----------
Q psy10063 407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV---------- 476 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i---------- 476 (894)
.+.+.+.+++|+|||++|++++ ++.|+||++..++.+..|.+|.. .|.+++|+|+|++||+++.|+.+
T Consensus 16 ~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~-~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~ 93 (611)
T 1nr0_A 16 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSH-QTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH 93 (611)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEESSSTTC
T ss_pred cccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCC-ceEEEEECCCCcEEEEEeCCCCEEEeECCCCcc
Confidence 4578899999999999999998 56999999999999999999998 99999999999999999998866
Q ss_pred ----------cceEEEEEecCCCEEEEEECC----CCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCC-EEEEEECCCC
Q psy10063 477 ----------EPINDMQFSKDATMFITASKD----HTAKLFTTHDRQLLKTYT-TERPVNSAALSPILP-HVVLGGGQEA 540 (894)
Q Consensus 477 ----------~~V~~l~~spdg~~L~sgs~D----g~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~-~l~~~~~~~~ 540 (894)
+.|.+|+|+|+|++|++++.+ +.|++|| .++++..+. |...|.+++|+|++. +|++++.|+.
T Consensus 94 ~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~ 171 (611)
T 1nr0_A 94 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNT 171 (611)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSC
T ss_pred eeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCe
Confidence 478999999999999999875 3577776 455555555 457899999999987 5999999987
Q ss_pred eEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc-----------c
Q psy10063 541 REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI-----------S 609 (894)
Q Consensus 541 ~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~-----------~ 609 (894)
|++||...++++..+.+|...|.+++|+|||++|++|+.|+.|+|||+..++.+ .
T Consensus 172 --------------v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~ 237 (611)
T 1nr0_A 172 --------------VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVA 237 (611)
T ss_dssp --------------EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCS
T ss_pred --------------EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccc
Confidence 899999999999999999999999999999999999999999999999877532 3
Q ss_pred CCCceeeeEECcCCcEE--EecCCeEEEEecccCCC------------------CCCCeeeeccccCCCceEEechhhHH
Q psy10063 610 EGSFTSSSTQQPDGLVY--PSQGGHIHSLSSHSTSS------------------TDTGGVFSGSRVDDSGVELTKDEQIE 669 (894)
Q Consensus 610 ~~~~v~~~~~spdg~~l--~~~~g~i~~~~~~~~~~------------------~d~~~i~sgs~~~d~~i~l~~~~~~~ 669 (894)
+...+..++|+|+|.++ .+.++.+..|+...... .++..+++++ .++.+++|+.....
T Consensus 238 h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s--~d~~i~~~~~~~~~ 315 (611)
T 1nr0_A 238 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS--ANGFINFVNPELGS 315 (611)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEE--TTCCEEEEETTTTE
T ss_pred cCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEe--CCCcEEEEeCCCCC
Confidence 45678899999999887 45567777776432100 0122333333 45555555543221
Q ss_pred Hhh---------hcccccCCCCeEEeeccCCcceeEeccCcc--------eeEEeeeEEEcCCCCEEEecccCccccccC
Q psy10063 670 MAR---------NRMSINHSGTRLHVNPFDEQQSVELTKDEQ--------IEMARNRMSINHSGTRLHVNPFDEQQSVDA 732 (894)
Q Consensus 670 ~~~---------~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~--------~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~ 732 (894)
... ..+.+..++..+.....+....+.-...+. .......+.+++++..+.. ..+..
T Consensus 316 ~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~-s~d~~----- 389 (611)
T 1nr0_A 316 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTV-SWDDH----- 389 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEE-ETTTE-----
T ss_pred cceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEE-EcCCc-----
Confidence 100 011122233333332222211111000000 0011122333333322221 11111
Q ss_pred Ccceeecccc------------------CcccccCC----------------CCcceecCCCCceEEEeeCCCCCEEEEe
Q psy10063 733 SPLMTWGHIE------------------GTPFKLDG----------------SDTPILAGPVDIGFKMPEPPKREKLALA 778 (894)
Q Consensus 733 ~~l~~~~~~~------------------g~~~~~dg----------------~~~~~~~~h~~~v~~la~spdg~~Latg 778 (894)
+++|.... ...+..++ .....+ .|...+.+++|+|||++||+|
T Consensus 390 --v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasg 466 (611)
T 1nr0_A 390 --LKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVG 466 (611)
T ss_dssp --EEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEE
T ss_pred --eEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEe
Confidence 11111000 00000111 111122 266778999999999999999
Q ss_pred cCCCcEEEEEccCCce----eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCC-cceeee--ccCCCCCeeEE
Q psy10063 779 LADKVSERYRDRKNKA----TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF-EEEFAR--IKGHFGPINSL 851 (894)
Q Consensus 779 s~Dg~I~iwd~~~~~~----~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t-g~~l~~--l~gH~~~V~~l 851 (894)
+.|+.|+||++...+. ...+...+..++|+|||++|++++.++ .|++|++.. ++++.. +.+|...|.+|
T Consensus 467 s~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~----~v~~w~~~~~~~~~~~~~~~~H~~~V~~v 542 (611)
T 1nr0_A 467 GQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSR----KVIPYSVANNFELAHTNSWTFHTAKVACV 542 (611)
T ss_dssp ETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTS----CEEEEEGGGTTEESCCCCCCCCSSCEEEE
T ss_pred CCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCC----CEEEEEcCCCCceeeeeeeeecccceeEE
Confidence 9999999999876543 123445566889999999999999988 599999987 666554 34599999999
Q ss_pred EEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063 852 AFHPDGKSYASGGEDGFVRLHTFDQAY 878 (894)
Q Consensus 852 ~fSpdg~~LaS~s~Dg~V~vWdl~~~~ 878 (894)
+|+|||++||+|+.|+.|+||+++.+.
T Consensus 543 ~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 543 SWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred EECCCCCEEEEEECCCcEEEEECCCcc
Confidence 999999999999999999999998754
No 5
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=7.7e-42 Score=408.09 Aligned_cols=466 Identities=14% Similarity=0.144 Sum_probs=344.0
Q ss_pred ccceeeeeccCccEEEecCCC--------------eEEEEEecCCCC-EEEEEEcc--CCCEEEEecCCCcEEEEecCCC
Q psy10063 379 SVDRLNSMSPAARKLATNAEP--------------VVKMQVTDQSAK-ITSLLWGN--LDQYIITGHAKGDICTWDLRMG 441 (894)
Q Consensus 379 ~~~~~~~~s~dg~~l~~~~~~--------------~~~~~l~~H~~~-V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg 441 (894)
.....++|+|||++|+.+.+. .....+.+|.+. |.+++|+| ++++|++|+.||.|+|||+..+
T Consensus 19 ~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~ 98 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD 98 (615)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCC
Confidence 344556788888888765543 334466789999 99999999 9999999999999999999755
Q ss_pred --------eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC----C----------------ccceEEEEEecCCC-EEE
Q psy10063 442 --------RELESISGHAKEPINDMQFSKDATMFITASHSQ----A----------------VEPINDMQFSKDAT-MFI 492 (894)
Q Consensus 442 --------~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~----~----------------i~~V~~l~~spdg~-~L~ 492 (894)
+.+..+..|.. .|.+++|+|++++|++++.+. . ...|.+++|+|+++ +|+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 177 (615)
T 1pgu_A 99 KESNSVEVNVKSEFQVLAG-PISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSM 177 (615)
T ss_dssp GGGTEEEEEEEEEEECCSS-CEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEE
T ss_pred cccccccccccchhhcccc-cEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEE
Confidence 77888888888 999999999999999998772 1 25899999999998 899
Q ss_pred EEECCCCEEEEEcCCCcEEEEEeC-CC---CeeEEEEcCC-CCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEE
Q psy10063 493 TASKDHTAKLFTTHDRQLLKTYTT-ER---PVNSAALSPI-LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA 567 (894)
Q Consensus 493 sgs~Dg~V~iwdl~~~~~~~~~~~-~~---~v~~l~~spd-g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~ 567 (894)
+++.|+.|+|||++.++++..+.. .. .|.+++|+|+ +++|++++.++. |++||+..++.+.
T Consensus 178 ~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~--------------i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 178 TVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK--------------ISCFDGKSGEFLK 243 (615)
T ss_dssp EEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC--------------EEEEETTTCCEEE
T ss_pred EEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe--------------EEEEECCCCCEeE
Confidence 999999999999999999999885 45 7999999999 999999999987 8999999999999
Q ss_pred Ec-c---CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC--------CCceeeeEECcCCcEE--EecCCeE
Q psy10063 568 RI-K---GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE--------GSFTSSSTQQPDGLVY--PSQGGHI 633 (894)
Q Consensus 568 ~l-~---~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~--------~~~v~~~~~spdg~~l--~~~~g~i 633 (894)
.+ . +|...|.+++|+ ++++|++++.||.|++||++.++.+.. ...+..+.+. ++..+ ...+|.+
T Consensus 244 ~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i 321 (615)
T 1pgu_A 244 YIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTL 321 (615)
T ss_dssp ECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCE
T ss_pred EecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCE
Confidence 98 6 899999999999 999999999999999999998764421 1344556664 44444 4556666
Q ss_pred EEEecccCC------CCC--------CCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEecc
Q psy10063 634 HSLSSHSTS------STD--------TGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTK 699 (894)
Q Consensus 634 ~~~~~~~~~------~~d--------~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~ 699 (894)
..|...... ... .. +++++ .++.+++|+.. .+...+.+....+...+....+....
T Consensus 322 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~-l~~~~--~dg~i~~w~~~-------~~~~~~~~~v~~~~~~~~~~l~~~~~ 391 (615)
T 1pgu_A 322 NFYELGHDEVLKTISGHNKGITALTVNP-LISGS--YDGRIMEWSSS-------SMHQDHSNLIVSLDNSKAQEYSSISW 391 (615)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEETTT-TEEEE--TTSCEEETTTT-------EEECCCCSCEEEEECCSTTCCEEEET
T ss_pred EEEECCCCcEEEEEeCCCCCEEEEEecC-cEEEC--CCCeEEEEEch-------hhcCcccCceEEEEECCCcEEEEEeC
Confidence 665532100 000 00 55555 68899999866 11123333333322222333333333
Q ss_pred CcceeEEe----------eeEEEcCCCCEEEecccCccccccC---------------------Ccceeeccc-cCcccc
Q psy10063 700 DEQIEMAR----------NRMSINHSGTRLHVNPFDEQQSVDA---------------------SPLMTWGHI-EGTPFK 747 (894)
Q Consensus 700 ~~~~~~~~----------~~~~~s~~g~~l~v~~~~~~~~~~~---------------------~~l~~~~~~-~g~~~~ 747 (894)
++.+..+. ..+.+++++..++............ ..+.+.+.. ++.+..
T Consensus 392 d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~ 471 (615)
T 1pgu_A 392 DDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQV 471 (615)
T ss_dssp TTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEE
T ss_pred CCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEE
Confidence 33333221 2344555555444421111000000 111111222 333222
Q ss_pred cCC--CCc--ceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc----cCCCceEeec----------
Q psy10063 748 LDG--SDT--PILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL----LSCPDFLFDF---------- 809 (894)
Q Consensus 748 ~dg--~~~--~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~----~~~~~~~fS~---------- 809 (894)
++- ... ..+.+|...|.+++|+|++++|++++.|+.|++|++..++.+..+. ..+..++|+|
T Consensus 472 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~ 551 (615)
T 1pgu_A 472 FKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEI 551 (615)
T ss_dssp EETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CC
T ss_pred EECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccccccccc
Confidence 221 111 3456789999999999999999999999999999999988876543 3455788999
Q ss_pred CCCeEEEEecCCCCceeEEEeecCCc-ceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063 810 DTTREVTTTSTKVGKFDARFYHLIFE-EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ 876 (894)
Q Consensus 810 dg~~l~~as~d~~g~~~I~vwd~~tg-~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~ 876 (894)
++++|++++.++ .|+|||+..+ +++..+.+|.+.|.+|+|+||++ |++++.||.|+||+++.
T Consensus 552 ~~~~l~~~~~dg----~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 552 EEDLVATGSLDT----NIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp SCCEEEEEETTS----CEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred CCCEEEEEcCCC----cEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 999999999987 5999999998 78899999999999999999999 99999999999999975
No 6
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.9e-40 Score=429.71 Aligned_cols=472 Identities=14% Similarity=0.162 Sum_probs=358.4
Q ss_pred CCccceeeeeccCccEEEecCCC-e----------EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063 377 PLSVDRLNSMSPAARKLATNAEP-V----------VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE 445 (894)
Q Consensus 377 ~~~~~~~~~~s~dg~~l~~~~~~-~----------~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~ 445 (894)
+......++|++||++|+.++.+ . ....+.+|.+.|.+++|+|+|++|++|+.||.|+|||+.+++++.
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH 693 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 33455667899999999876542 2 233678899999999999999999999999999999999999999
Q ss_pred EecCCCCCCeeEEEEcC--CCCEEEEEeCCCCc------------------cceEEEEEecCCCEEEEEECCCCEEEEEc
Q psy10063 446 SISGHAKEPINDMQFSK--DATMFITASHSQAV------------------EPINDMQFSKDATMFITASKDHTAKLFTT 505 (894)
Q Consensus 446 ~l~~h~~~~V~~v~~sp--dg~~la~~~~d~~i------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl 505 (894)
.+.+|.. .|.+++|++ ++.+|++++.|+.+ ..|.+++|+|++++|++++.||.|++||+
T Consensus 694 ~~~~~~~-~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~ 772 (1249)
T 3sfz_A 694 TYDEHSE-QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDV 772 (1249)
T ss_dssp EEECCSS-CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEG
T ss_pred EEcCCCC-cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeC
Confidence 9999998 999999999 56689999998876 57999999999999999999999999999
Q ss_pred CCCcEEEEEeCC--------------CCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc---------------------
Q psy10063 506 HDRQLLKTYTTE--------------RPVNSAALSPILPHVVLGGGQEAREVTTTSTKV--------------------- 550 (894)
Q Consensus 506 ~~~~~~~~~~~~--------------~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~--------------------- 550 (894)
+.++....+... ..+.+++|+|+|++|++++ ++.+.+|......
T Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~ 851 (1249)
T 3sfz_A 773 RSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY 851 (1249)
T ss_dssp GGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS
T ss_pred CCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC
Confidence 988877766421 2566777777777777766 4556666543211
Q ss_pred --------ceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc---------------
Q psy10063 551 --------GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD--------------- 607 (894)
Q Consensus 551 --------~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~--------------- 607 (894)
....|++||+..+..+..+.+|...|.+++|+|+|++|++++.||.|++|++.....
T Consensus 852 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~ 931 (1249)
T 3sfz_A 852 DHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQ 931 (1249)
T ss_dssp TTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEE
T ss_pred CCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEc
Confidence 011389999999999999999999999999999999999999999999999753210
Q ss_pred --------------------------ccCCCceeeeEECcCCcEE--EecCCeEEEEecccCC-----------------
Q psy10063 608 --------------------------ISEGSFTSSSTQQPDGLVY--PSQGGHIHSLSSHSTS----------------- 642 (894)
Q Consensus 608 --------------------------~~~~~~v~~~~~spdg~~l--~~~~g~i~~~~~~~~~----------------- 642 (894)
......+..++++|+|.++ ...+|.+..|......
T Consensus 932 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~ 1011 (1249)
T 3sfz_A 932 ENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQF 1011 (1249)
T ss_dssp TTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEE
T ss_pred CCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEE
Confidence 0123457788999999877 4556666666542211
Q ss_pred CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEE----------------
Q psy10063 643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMA---------------- 706 (894)
Q Consensus 643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~---------------- 706 (894)
.+++..+++++ .++.+++|+....... ....+.+....+........+....++.+..+
T Consensus 1012 s~dg~~l~s~~--~dg~i~vwd~~~~~~~---~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~ 1086 (1249)
T 3sfz_A 1012 TADGKTLISSS--EDSVIQVWNWQTGDYV---FLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQG 1086 (1249)
T ss_dssp CSSSSCEEEEC--SSSBEEEEETTTTEEE---CCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSS
T ss_pred CCCCCEEEEEc--CCCEEEEEECCCCceE---EEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCC
Confidence 24666777777 7889999987654321 11122222222222222222222233322222
Q ss_pred -eeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEE
Q psy10063 707 -RNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSE 785 (894)
Q Consensus 707 -~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~ 785 (894)
...+.++++|..++.+..++ .+++|+... +.....+.+|...|.+++|+|++++||+++.||.|+
T Consensus 1087 ~v~~~~~s~d~~~l~s~s~d~-------~v~iwd~~~-------~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~ 1152 (1249)
T 3sfz_A 1087 TVLSCAISSDATKFSSTSADK-------TAKIWSFDL-------LSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIR 1152 (1249)
T ss_dssp CCCCEEECSSSSSCEEECCSS-------CCCEECSSS-------SSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCC
T ss_pred cEEEEEECCCCCEEEEEcCCC-------cEEEEECCC-------cceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEE
Confidence 13356667776666655443 366665443 334456778999999999999999999999999999
Q ss_pred EEEccCCceeec------------cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEE
Q psy10063 786 RYRDRKNKATAG------------FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF 853 (894)
Q Consensus 786 iwd~~~~~~~~~------------~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~f 853 (894)
+||+..++.+.. +...+..++|++||+++++++ + .|++||+.+++++..+.+|...|.+++|
T Consensus 1153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g----~v~vwd~~~g~~~~~~~~~~~~i~~~~~ 1226 (1249)
T 3sfz_A 1153 IWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--G----YLKWWNVATGDSSQTFYTNGTNLKKIHV 1226 (1249)
T ss_dssp EEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--S----SEEEBCSSSCBCCCCCCCSSCCCCCCEE
T ss_pred EEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC--C----eEEEEECCCCceeeeeeccCCcccEEEE
Confidence 999998876543 334567889999999999875 2 5999999999999999999999999999
Q ss_pred eeCCcEEEEecCCCcEEEEecC
Q psy10063 854 HPDGKSYASGGEDGFVRLHTFD 875 (894)
Q Consensus 854 Spdg~~LaS~s~Dg~V~vWdl~ 875 (894)
+|||++|++++.||.|+||++.
T Consensus 1227 s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1227 SPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp CSSSCCEEEECTTCCEEEECCC
T ss_pred CCCCCEEEEecCCcEEEEEeec
Confidence 9999999999999999999984
No 7
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-40 Score=412.81 Aligned_cols=444 Identities=11% Similarity=0.039 Sum_probs=313.3
Q ss_pred EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc------
Q psy10063 403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV------ 476 (894)
Q Consensus 403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------ 476 (894)
....+|.+.|.+|+|+|++++||+|+.||.|+||+...++++..+. |.. .|.+|+|+| |++|++++.|+.+
T Consensus 11 ~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~-~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRS-AIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCC-CEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred ccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCC-CEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 3556899999999999999999999999999999999888766654 655 899999999 8899999999877
Q ss_pred -----------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE-E----------e-CCCCeeEEEEcCCC-CEE
Q psy10063 477 -----------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT-Y----------T-TERPVNSAALSPIL-PHV 532 (894)
Q Consensus 477 -----------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~-~----------~-~~~~v~~l~~spdg-~~l 532 (894)
..|.+++|+|++++|++|+.||.|+|||++.+++... + . |.+.|.+++|+|++ ..|
T Consensus 88 ~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 88 SQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp TCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 4689999999999999999999999999998886421 1 1 45789999999964 678
Q ss_pred EEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC------------------CCCeEEEEEecCCCEEEEEeCC
Q psy10063 533 VLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH------------------FGPINSLAFHPDGKSYASGGED 594 (894)
Q Consensus 533 ~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h------------------~~~V~~l~~spdg~~l~sgs~D 594 (894)
++++.++. | +||++.+++++.+.+| ...|.+++|+|+|++|++|+.|
T Consensus 168 ~~g~~dg~--------------v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D 232 (902)
T 2oaj_A 168 LISYEYVT--------------L-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED 232 (902)
T ss_dssp EEECSSCE--------------E-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT
T ss_pred EEEeCCCc--------------E-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC
Confidence 88887775 7 9999988888877665 5789999999999999999999
Q ss_pred CcEEEEECCCCcccc---------C-------------CCceeeeEEC----cCC-cEEEec--C-----CeEEEEecc-
Q psy10063 595 GFLISNTLSNGLDIS---------E-------------GSFTSSSTQQ----PDG-LVYPSQ--G-----GHIHSLSSH- 639 (894)
Q Consensus 595 g~I~vwdl~~~~~~~---------~-------------~~~v~~~~~s----pdg-~~l~~~--~-----g~i~~~~~~- 639 (894)
|.|+|||++.++.+. + ...+..++|+ |++ .++++. + ..+..|...
T Consensus 233 g~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~ 312 (902)
T 2oaj_A 233 NSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGY 312 (902)
T ss_dssp CCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCC
Confidence 999999998876432 1 2257788884 443 344332 1 134444310
Q ss_pred -------------------------cC---------------CC-----CCCCeeeeccccCCCceEEechhhHHHhhh-
Q psy10063 640 -------------------------ST---------------SS-----TDTGGVFSGSRVDDSGVELTKDEQIEMARN- 673 (894)
Q Consensus 640 -------------------------~~---------------~~-----~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~- 673 (894)
.. .+ .+...++.++ .++.+++|+.........
T Consensus 313 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s--~dg~l~~~~~~~g~~~~~~ 390 (902)
T 2oaj_A 313 TPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLIL--GNGEIETMLYPSGIFTDKA 390 (902)
T ss_dssp CCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEE--TTSCEEEEETTTCCEECCG
T ss_pred CCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEc--CCCcEEEEECCCCCccccc
Confidence 00 00 1122333333 467788887532210000
Q ss_pred ---c-ccccCCCCeEEeeccC-------------CcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcce
Q psy10063 674 ---R-MSINHSGTRLHVNPFD-------------EQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLM 736 (894)
Q Consensus 674 ---~-~~~~~~g~~~~~~~~~-------------~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~ 736 (894)
. ....+......+.... ......+. . .......++++++|..++.+..|+. ++
T Consensus 391 ~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~-G--~~~~v~sv~~spdg~~laSgs~Dgt-------Vr 460 (902)
T 2oaj_A 391 SLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLK-G--GVRTKRQKLPAEYGTAFITGHSNGS-------VR 460 (902)
T ss_dssp GGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCC-C--SBCCCCCCCCCSEEEEEEEEETTSE-------EE
T ss_pred ccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCccc-C--CcCCCCcccccccCcEEEEecCCCc-------EE
Confidence 0 0000111110000000 00000000 0 0011123456777888877766654 78
Q ss_pred eeccccCcccccCCCCcce-e-----cCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce----------------
Q psy10063 737 TWGHIEGTPFKLDGSDTPI-L-----AGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA---------------- 794 (894)
Q Consensus 737 ~~~~~~g~~~~~dg~~~~~-~-----~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~---------------- 794 (894)
+|+...+.+... ..+.+ + .+|...|.+|+|+||+++||+|+.||.|+||++...+.
T Consensus 461 lWd~~~g~~~~~--~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~ 538 (902)
T 2oaj_A 461 IYDASHGDIQDN--ASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNF 538 (902)
T ss_dssp EEESSCCTTTTT--BCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------C
T ss_pred EEECCCccccCC--ceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceee
Confidence 887766632110 00000 1 27889999999999999999999999999999876521
Q ss_pred --------------------------------eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee---
Q psy10063 795 --------------------------------TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA--- 839 (894)
Q Consensus 795 --------------------------------~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~--- 839 (894)
+..+...+..++||||| +|++++.|+ .|+|||++.++++.
T Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~----tv~lwd~~~~~~~~~~~ 613 (902)
T 2oaj_A 539 RRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAG----SLMLIDRRGPAIIYMEN 613 (902)
T ss_dssp CSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTS----EEEEEETTTTEEEEEEE
T ss_pred eeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCC----cEEEEECCCCeEEEEee
Confidence 22334456688899999 999999987 69999998876653
Q ss_pred --ecc-CCCCCeeEEEEe-----eCC---cEEEEecCCCcEEEEec---Ccccccccc
Q psy10063 840 --RIK-GHFGPINSLAFH-----PDG---KSYASGGEDGFVRLHTF---DQAYFDYTF 883 (894)
Q Consensus 840 --~l~-gH~~~V~~l~fS-----pdg---~~LaS~s~Dg~V~vWdl---~~~~~~~~~ 883 (894)
.+. +|.+.|++|+|+ ||| ++|++|+.||.|++|++ ..+++...|
T Consensus 614 ~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~ 671 (902)
T 2oaj_A 614 IREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQL 671 (902)
T ss_dssp GGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEE
T ss_pred hhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEe
Confidence 454 999999999999 886 89999999999999999 666655544
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-40 Score=376.78 Aligned_cols=302 Identities=15% Similarity=0.199 Sum_probs=248.5
Q ss_pred EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063 402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND 481 (894)
Q Consensus 402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~ 481 (894)
...+.+|.+.|.+++|+|++++|++|+.||.|+|||+.+++.++.+.+|.+ .|.+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~-------------------------~V~~ 155 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-------------------------SVQD 155 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSS-------------------------CEEE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCC-------------------------cEEE
Confidence 346789999999999999999999999999999999999999999999988 7888
Q ss_pred EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063 482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL 560 (894)
Q Consensus 482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~ 560 (894)
|+|+|++++|++|+.|+.|+|||+..++++..+.. ...|.+++|+|++.+|++++.|+. |++||+
T Consensus 156 v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~--------------i~~wd~ 221 (410)
T 1vyh_C 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT--------------IKMWEV 221 (410)
T ss_dssp EEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSE--------------EEEEET
T ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe--------------EEEEEC
Confidence 89999999999999999999999999999988874 578999999999999999999997 899999
Q ss_pred cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063 561 IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGLVYPSQGGHIHSL 636 (894)
Q Consensus 561 ~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~~l~~~~g~i~~~ 636 (894)
+.++++..+.+|...|.+++|+++|.+|++|+.||.|++||+..++... +...+.+++|+|++
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~------------- 288 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPES------------- 288 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSC-------------
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcc-------------
Confidence 9999999999999999999999999999999999999999997654221 01111111111110
Q ss_pred ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063 637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG 716 (894)
Q Consensus 637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g 716 (894)
T Consensus 289 -------------------------------------------------------------------------------- 288 (410)
T 1vyh_C 289 -------------------------------------------------------------------------------- 288 (410)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee
Q psy10063 717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA 796 (894)
Q Consensus 717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~ 796 (894)
....+ ....+. ........+.+|++|+.|+.|++||+..++.+.
T Consensus 289 ~~~~~------------------------~~~~~~------------~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~ 332 (410)
T 1vyh_C 289 SYSSI------------------------SEATGS------------ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332 (410)
T ss_dssp GGGGG------------------------GGCCSC------------C-------CCEEEEEETTSEEEEEETTTTEEEE
T ss_pred cccch------------------------hhhccc------------cccccCCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 00000 000000 001112357899999999999999999888765
Q ss_pred cc---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063 797 GF---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHT 873 (894)
Q Consensus 797 ~~---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd 873 (894)
.+ ...+..++|+++|++|++++.|+ .|+|||+..++++..+.+|...|.+|+|+|++.+||+|+.||.|+||+
T Consensus 333 ~~~~h~~~v~~v~~~~~g~~l~s~s~D~----~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 333 TLVGHDNWVRGVLFHSGGKFILSCADDK----TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp EEECCSSCEEEEEECSSSSCEEEEETTT----EEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EEECCCCcEEEEEEcCCCCEEEEEeCCC----eEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 44 33455788999999999999887 699999999999999999999999999999999999999999999998
Q ss_pred cC
Q psy10063 874 FD 875 (894)
Q Consensus 874 l~ 875 (894)
+.
T Consensus 409 ~r 410 (410)
T 1vyh_C 409 CR 410 (410)
T ss_dssp --
T ss_pred CC
Confidence 63
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=8.5e-40 Score=361.91 Aligned_cols=285 Identities=14% Similarity=0.238 Sum_probs=252.4
Q ss_pred eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063 400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI 479 (894)
Q Consensus 400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V 479 (894)
..+..|.+|.+.|.+++|+||+++|++|+.||.|+|||+.+++.+..+..|.. .|
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~-------------------------~v 100 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSS-------------------------WV 100 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSS-------------------------CE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCc-------------------------cE
Confidence 45668899999999999999999999999999999999999999999998887 78
Q ss_pred EEEEEecCCCEEEEEECCCCEEEEEcCCCc----EEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063 480 NDMQFSKDATMFITASKDHTAKLFTTHDRQ----LLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD 554 (894)
Q Consensus 480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~----~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~ 554 (894)
.+++|+|+|++|++|+.|+.|+|||+..++ ....+. |.+.|.+++|++++. |++++.++.
T Consensus 101 ~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~-------------- 165 (340)
T 1got_B 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTT-------------- 165 (340)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSC--------------
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCc--------------
Confidence 888899999999999999999999998753 444454 468899999998875 888888887
Q ss_pred EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063 555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH 634 (894)
Q Consensus 555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~ 634 (894)
|++||+..++.+..+.+|.+.|.+++|+|++++|++|+.||.|++||++.++.+
T Consensus 166 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~-------------------------- 219 (340)
T 1got_B 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR-------------------------- 219 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEE--------------------------
T ss_pred EEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeE--------------------------
Confidence 899999999999999999999999999999999999999999999998643210
Q ss_pred EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063 635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH 714 (894)
Q Consensus 635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ 714 (894)
T Consensus 220 -------------------------------------------------------------------------------- 219 (340)
T 1got_B 220 -------------------------------------------------------------------------------- 219 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce
Q psy10063 715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA 794 (894)
Q Consensus 715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~ 794 (894)
..+.+|...|.+++|+|++.+|++|+.|+.|+|||++..+.
T Consensus 220 ---------------------------------------~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 220 ---------------------------------------QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp ---------------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred ---------------------------------------EEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 01234677899999999999999999999999999998876
Q ss_pred eecccc-----CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063 795 TAGFLL-----SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFV 869 (894)
Q Consensus 795 ~~~~~~-----~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V 869 (894)
+..+.. .+..++|+++|+++++++.++ .|+|||+..++++..+.+|.+.|.+|+|+|||++||+||.||.|
T Consensus 261 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~----~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i 336 (340)
T 1got_B 261 LMTYSHDNIICGITSVSFSKSGRLLLAGYDDF----NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336 (340)
T ss_dssp EEEECCTTCCSCEEEEEECTTSSEEEEEETTS----EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred EEEEccCCcccceEEEEECCCCCEEEEECCCC----eEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccE
Confidence 554332 345778999999999999887 69999999999999999999999999999999999999999999
Q ss_pred EEEe
Q psy10063 870 RLHT 873 (894)
Q Consensus 870 ~vWd 873 (894)
+||+
T Consensus 337 ~iWd 340 (340)
T 1got_B 337 KIWN 340 (340)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9996
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.2e-40 Score=359.50 Aligned_cols=288 Identities=18% Similarity=0.215 Sum_probs=252.3
Q ss_pred eEEEEEecCCCCEEEEEEccC----CCEEEEecCCCcEEEEecCCCeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063 400 VVKMQVTDQSAKITSLLWGNL----DQYIITGHAKGDICTWDLRMGRE--LESISGHAKEPINDMQFSKDATMFITASHS 473 (894)
Q Consensus 400 ~~~~~l~~H~~~V~~l~~spd----g~~L~sgs~Dg~I~iWd~~tg~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d 473 (894)
.+...+++|.+.|.+|+|+++ +++|++|+.|+.|+|||+..++. ...+.+|..
T Consensus 23 ~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~--------------------- 81 (321)
T 3ow8_A 23 ILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQL--------------------- 81 (321)
T ss_dssp EEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSS---------------------
T ss_pred heeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCC---------------------
Confidence 344567799999999999985 56999999999999999987764 456788887
Q ss_pred CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063 474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK 552 (894)
Q Consensus 474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~ 552 (894)
.|.+++|++++.+|++++.|+.|+|||+++++++..+.. ...+.+++|+|++++|++++.++.
T Consensus 82 ----~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~------------ 145 (321)
T 3ow8_A 82 ----GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGK------------ 145 (321)
T ss_dssp ----CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSE------------
T ss_pred ----CEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCc------------
Confidence 788888899999999999999999999999999988875 578999999999999999999986
Q ss_pred eeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCe
Q psy10063 553 FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGH 632 (894)
Q Consensus 553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~ 632 (894)
|++|+++.++.+..+..|...|.+++|+|+|++|++|+.||.|++||++.++.+
T Consensus 146 --v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~------------------------ 199 (321)
T 3ow8_A 146 --VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL------------------------ 199 (321)
T ss_dssp --EEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE------------------------
T ss_pred --EEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE------------------------
Confidence 899999999999999999999999999999999999999999999998654210
Q ss_pred EEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEE
Q psy10063 633 IHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSI 712 (894)
Q Consensus 633 i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 712 (894)
T Consensus 200 -------------------------------------------------------------------------------- 199 (321)
T 3ow8_A 200 -------------------------------------------------------------------------------- 199 (321)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCC
Q psy10063 713 NHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKN 792 (894)
Q Consensus 713 s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~ 792 (894)
..+.+|...|.+++|+|++++|++++.|+.|+|||++..
T Consensus 200 -----------------------------------------~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~ 238 (321)
T 3ow8_A 200 -----------------------------------------HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 238 (321)
T ss_dssp -----------------------------------------EEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC
T ss_pred -----------------------------------------EEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc
Confidence 012346667889999999999999999999999999988
Q ss_pred ceeecc---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063 793 KATAGF---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFV 869 (894)
Q Consensus 793 ~~~~~~---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V 869 (894)
+.+..+ ...+..++|+|++.+|++++.|+ .|+|||+..++++..+.+|.+.|.+|+|+++|++|++++.||.|
T Consensus 239 ~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~----~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i 314 (321)
T 3ow8_A 239 NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK----SVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI 314 (321)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCE
T ss_pred ceeEEEcCCCCceEEEEECCCCCEEEEEeCCC----cEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 765443 34455788999999999999988 59999999999999999999999999999999999999999999
Q ss_pred EEEecC
Q psy10063 870 RLHTFD 875 (894)
Q Consensus 870 ~vWdl~ 875 (894)
+|||+.
T Consensus 315 ~vwd~p 320 (321)
T 3ow8_A 315 HIYDCP 320 (321)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 999973
No 11
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.5e-39 Score=417.93 Aligned_cols=460 Identities=16% Similarity=0.184 Sum_probs=347.0
Q ss_pred EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc----
Q psy10063 401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV---- 476 (894)
Q Consensus 401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i---- 476 (894)
..+.+.+|.+.|.+++|+|+|++|++|+.||.|+|||+.+++.+..+.+|.. .|.+++|+|+|++|++++.|+.+
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED-EVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCC-CEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 3456889999999999999999999999999999999999999999999998 99999999999999999999877
Q ss_pred --------------cceEEEEEec--CCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCC
Q psy10063 477 --------------EPINDMQFSK--DATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQE 539 (894)
Q Consensus 477 --------------~~V~~l~~sp--dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~ 539 (894)
..|.+++|++ ++.+|++|+.||.|++||++.++++..+.. ...|.+++|+|++++|++++.++
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCC
Confidence 5899999999 566899999999999999999999988874 68899999999999999999999
Q ss_pred CeEEEeccCccc----------------------------------------eeeEEEEeccccceEEEcc-CCCCCeEE
Q psy10063 540 AREVTTTSTKVG----------------------------------------KFDARFYHLIFEEEFARIK-GHFGPINS 578 (894)
Q Consensus 540 ~~~v~~~~~~~~----------------------------------------~~~v~vwd~~~~~~~~~l~-~h~~~V~~ 578 (894)
.+.+|+...... .-.+.+||+..+..+..+. +|...|.+
T Consensus 766 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~ 845 (1249)
T 3sfz_A 766 TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQY 845 (1249)
T ss_dssp EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCE
T ss_pred eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEE
Confidence 999998753310 0137899999988887775 89999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCccc----cCCCceeeeEECcCCcEE--EecCCeEEEEecccCCCC--------
Q psy10063 579 LAFHPDGKSYASGGEDGFLISNTLSNGLDI----SEGSFTSSSTQQPDGLVY--PSQGGHIHSLSSHSTSST-------- 644 (894)
Q Consensus 579 l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~----~~~~~v~~~~~spdg~~l--~~~~g~i~~~~~~~~~~~-------- 644 (894)
++|+|++++|++++.||.|++|++..+..+ .+...+..++|+|+|..+ .+.+|.+..|........
T Consensus 846 ~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~ 925 (1249)
T 3sfz_A 846 CDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQE 925 (1249)
T ss_dssp EEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccce
Confidence 999999999999999999999999987654 346678899999999877 455677777764211000
Q ss_pred -------CCCeeeeccccCCCceEEechhhHHHh------hhcccccCCCCeEEeeccCCcceeEeccCcc-------ee
Q psy10063 645 -------DTGGVFSGSRVDDSGVELTKDEQIEMA------RNRMSINHSGTRLHVNPFDEQQSVELTKDEQ-------IE 704 (894)
Q Consensus 645 -------d~~~i~sgs~~~d~~i~l~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~-------~~ 704 (894)
....++... ....+.++........ ...+.+...+..+.+...++...+.-...+. ..
T Consensus 926 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~ 1003 (1249)
T 3sfz_A 926 IDVVFQENETMVLAVD--NIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHK 1003 (1249)
T ss_dssp EEEEEETTEEEEEEEE--SSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCS
T ss_pred eeEEEcCCCcEEEEec--CCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCC
Confidence 000000000 1111111111000000 0001111122222111111111110000000 11
Q ss_pred EEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcE
Q psy10063 705 MARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVS 784 (894)
Q Consensus 705 ~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I 784 (894)
.....+.++++|..++.+..++ .+.+|+...+... .+.+|...|.+++|++++ .|++++.|+.|
T Consensus 1004 ~~v~~l~~s~dg~~l~s~~~dg-------~i~vwd~~~~~~~--------~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v 1067 (1249)
T 3sfz_A 1004 KAVRHIQFTADGKTLISSSEDS-------VIQVWNWQTGDYV--------FLQAHQETVKDFRLLQDS-RLLSWSFDGTV 1067 (1249)
T ss_dssp SCCCCEEECSSSSCEEEECSSS-------BEEEEETTTTEEE--------CCBCCSSCEEEEEECSSS-EEEEEESSSEE
T ss_pred CceEEEEECCCCCEEEEEcCCC-------EEEEEECCCCceE--------EEecCCCcEEEEEEcCCC-cEEEEECCCcE
Confidence 1224467788888777765544 3677765544322 345788999999999965 67888999999
Q ss_pred EEEEccCCceeec---cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEE
Q psy10063 785 ERYRDRKNKATAG---FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYA 861 (894)
Q Consensus 785 ~iwd~~~~~~~~~---~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~La 861 (894)
++||+..++.+.. +...+..++|+++++++++++.++ .|+|||+..++++..+.+|.+.|.+++|+|||++||
T Consensus 1068 ~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~----~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~la 1143 (1249)
T 3sfz_A 1068 KVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK----TAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLA 1143 (1249)
T ss_dssp EEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS----CCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEE
T ss_pred EEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC----cEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEE
Confidence 9999988876443 445567889999999999999987 599999999999999999999999999999999999
Q ss_pred EecCCCcEEEEecCcccccccc
Q psy10063 862 SGGEDGFVRLHTFDQAYFDYTF 883 (894)
Q Consensus 862 S~s~Dg~V~vWdl~~~~~~~~~ 883 (894)
+++.||.|+||++..++.+..+
T Consensus 1144 t~~~dg~i~vwd~~~~~~~~~~ 1165 (1249)
T 3sfz_A 1144 TGDDNGEIRIWNVSDGQLLHSC 1165 (1249)
T ss_dssp EEETTSCCCEEESSSSCCCCCC
T ss_pred EEeCCCEEEEEECCCCceEEEe
Confidence 9999999999999988876654
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.3e-38 Score=346.68 Aligned_cols=289 Identities=16% Similarity=0.220 Sum_probs=246.8
Q ss_pred EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063 401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN 480 (894)
Q Consensus 401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~ 480 (894)
++..|.+|.+.|.+|+|+|++++|++|+.||.|+|||+.+++.++.+..|.. .|.
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~-------------------------~v~ 59 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTET-------------------------PVR 59 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-------------------------CEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCC-------------------------cEE
Confidence 4567889999999999999999999999999999999999999999999987 788
Q ss_pred EEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063 481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
+++|++++++|++|+.|+.|+|||+++++++..+.. ...|.+++|+|++++|++++.|+. |++||
T Consensus 60 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~--------------v~lWd 125 (304)
T 2ynn_A 60 AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT--------------VKLWN 125 (304)
T ss_dssp EEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSC--------------EEEEE
T ss_pred EEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCe--------------EEEEE
Confidence 889999999999999999999999999999988875 588999999999999999999997 89999
Q ss_pred cccc-ceEEEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEe
Q psy10063 560 LIFE-EEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLS 637 (894)
Q Consensus 560 ~~~~-~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~ 637 (894)
++.+ .....+.+|...|.+++|+| ++.+|++|+.||.|++||+.......
T Consensus 126 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~---------------------------- 177 (304)
T 2ynn_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF---------------------------- 177 (304)
T ss_dssp GGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSE----------------------------
T ss_pred CCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccc----------------------------
Confidence 9877 45567889999999999999 67899999999999999985432100
Q ss_pred cccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCC
Q psy10063 638 SHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGT 717 (894)
Q Consensus 638 ~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~ 717 (894)
T Consensus 178 -------------------------------------------------------------------------------- 177 (304)
T 2ynn_A 178 -------------------------------------------------------------------------------- 177 (304)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC--CCCEEEEecCCCcEEEEEccCCcee
Q psy10063 718 RLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP--KREKLALALADKVSERYRDRKNKAT 795 (894)
Q Consensus 718 ~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp--dg~~Latgs~Dg~I~iwd~~~~~~~ 795 (894)
.+..+|...+..++|+| ++.+|++|+.|+.|+|||++.++++
T Consensus 178 ------------------------------------~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~ 221 (304)
T 2ynn_A 178 ------------------------------------TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (304)
T ss_dssp ------------------------------------EEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE
T ss_pred ------------------------------------eeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc
Confidence 00112333455566655 7889999999999999999988775
Q ss_pred ecc---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCc--EEEEecCCCcEE
Q psy10063 796 AGF---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK--SYASGGEDGFVR 870 (894)
Q Consensus 796 ~~~---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~--~LaS~s~Dg~V~ 870 (894)
..+ ...+..++|+|++.+|++++.|+ .|+|||+.+++++..+..|...|++++|+|++. +|++|+.|| +.
T Consensus 222 ~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg----~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~ 296 (304)
T 2ynn_A 222 ATLEGHMSNVSFAVFHPTLPIIISGSEDG----TLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FT 296 (304)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTS----CEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EE
T ss_pred eeeCCCCCCEEEEEECCCCCEEEEEcCCC----eEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eE
Confidence 544 34455678999999999999998 599999999999999999999999999999885 578887666 77
Q ss_pred EEecCcc
Q psy10063 871 LHTFDQA 877 (894)
Q Consensus 871 vWdl~~~ 877 (894)
+|++..+
T Consensus 297 ~~~~~~~ 303 (304)
T 2ynn_A 297 VLSLGND 303 (304)
T ss_dssp EEECC--
T ss_pred EEEeccC
Confidence 8888754
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8.6e-39 Score=355.97 Aligned_cols=286 Identities=13% Similarity=0.217 Sum_probs=251.0
Q ss_pred eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063 400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI 479 (894)
Q Consensus 400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V 479 (894)
.....|.+|.+.|.+|+|+|++++|++|+.||.|+|||+.+++....+..|.. .|
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~-------------------------~v 109 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCT-------------------------WV 109 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS-------------------------CC
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCC-------------------------CE
Confidence 45568899999999999999999999999999999999999999888888876 68
Q ss_pred EEEEEecCCCEEEEEECCCCEEEEEcCCC------cEEEEE-eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063 480 NDMQFSKDATMFITASKDHTAKLFTTHDR------QLLKTY-TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK 552 (894)
Q Consensus 480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~------~~~~~~-~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~ 552 (894)
.+++|+|+|.+|++|+.|+.|++|++... .....+ .|...|.+++|++++.+|++++.++.
T Consensus 110 ~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~------------ 177 (354)
T 2pbi_B 110 MACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGT------------ 177 (354)
T ss_dssp CEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSE------------
T ss_pred EEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCc------------
Confidence 88888899999999999999999998643 223333 46788999999999999999999997
Q ss_pred eeEEEEeccccceEEEccCCCCCeEEEEEec--CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecC
Q psy10063 553 FDARFYHLIFEEEFARIKGHFGPINSLAFHP--DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQG 630 (894)
Q Consensus 553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~sp--dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~ 630 (894)
|++||++.++++..+.+|...|.+++|++ +|.+|++|+.||.|++||++.++.+
T Consensus 178 --v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~---------------------- 233 (354)
T 2pbi_B 178 --CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCV---------------------- 233 (354)
T ss_dssp --EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEE----------------------
T ss_pred --EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEE----------------------
Confidence 89999999999999999999999999987 5789999999999999998654210
Q ss_pred CeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeE
Q psy10063 631 GHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRM 710 (894)
Q Consensus 631 g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 710 (894)
T Consensus 234 -------------------------------------------------------------------------------- 233 (354)
T 2pbi_B 234 -------------------------------------------------------------------------------- 233 (354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEcc
Q psy10063 711 SINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDR 790 (894)
Q Consensus 711 ~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~ 790 (894)
..+.+|...|.+++|+|++.+|++++.|+.|++||++
T Consensus 234 -------------------------------------------~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~ 270 (354)
T 2pbi_B 234 -------------------------------------------QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR 270 (354)
T ss_dssp -------------------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred -------------------------------------------EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 0123477789999999999999999999999999998
Q ss_pred CCceeeccc-----cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecC
Q psy10063 791 KNKATAGFL-----LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE 865 (894)
Q Consensus 791 ~~~~~~~~~-----~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~ 865 (894)
..+.+..+. ..+..++|+++|.++++++.++ .|+|||+..++++..+.+|.+.|.+|+|+|||++||+|+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~----~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 271 ADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY----TINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS----CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred CCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC----cEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcC
Confidence 876654332 2345678999999999999887 5999999999999999999999999999999999999999
Q ss_pred CCcEEEEe
Q psy10063 866 DGFVRLHT 873 (894)
Q Consensus 866 Dg~V~vWd 873 (894)
||.|+||+
T Consensus 347 D~~v~vW~ 354 (354)
T 2pbi_B 347 DHTLRVWA 354 (354)
T ss_dssp TSEEEEEC
T ss_pred CCCEEecC
Confidence 99999996
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.2e-39 Score=363.08 Aligned_cols=293 Identities=15% Similarity=0.234 Sum_probs=251.9
Q ss_pred CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063 399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP 478 (894)
Q Consensus 399 ~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~ 478 (894)
......|.+|.+.|.+|+|+|++++|++|+.||.|+|||+.+++.+..+.+|.. .
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~-------------------------~ 110 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCP-------------------------W 110 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCT-------------------------T
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCC-------------------------C
Confidence 345668999999999999999999999999999999999999999999999987 7
Q ss_pred eEEEEEecCCCEEEEEECCCCEEEEEcCCCc-------EEEEEe-CCCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCc
Q psy10063 479 INDMQFSKDATMFITASKDHTAKLFTTHDRQ-------LLKTYT-TERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTK 549 (894)
Q Consensus 479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~-------~~~~~~-~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~ 549 (894)
|.+++|+|+|++|++|+.|+.|+|||+.... +...+. |.+.|.+++|+|++ .+|++++.|+.
T Consensus 111 v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~--------- 181 (380)
T 3iz6_a 111 VMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT--------- 181 (380)
T ss_dssp CCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC---------
T ss_pred EEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCc---------
Confidence 8888899999999999999999999997532 223333 45789999999974 56899999987
Q ss_pred cceeeEEEEeccccceEEEc-----cCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCC
Q psy10063 550 VGKFDARFYHLIFEEEFARI-----KGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDG 623 (894)
Q Consensus 550 ~~~~~v~vwd~~~~~~~~~l-----~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg 623 (894)
|++||+..++.+..+ .+|...|.+++|++ ++.+|++|+.||.|++||++....
T Consensus 182 -----i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~---------------- 240 (380)
T 3iz6_a 182 -----CVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR---------------- 240 (380)
T ss_dssp -----EEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC----------------
T ss_pred -----EEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc----------------
Confidence 899999999888776 67999999999987 889999999999999999853210
Q ss_pred cEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcce
Q psy10063 624 LVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQI 703 (894)
Q Consensus 624 ~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~ 703 (894)
T Consensus 241 -------------------------------------------------------------------------------- 240 (380)
T 3iz6_a 241 -------------------------------------------------------------------------------- 240 (380)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCc
Q psy10063 704 EMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKV 783 (894)
Q Consensus 704 ~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~ 783 (894)
....+.+|.+.|.+++|+|++.+|++|+.|+.
T Consensus 241 ------------------------------------------------~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~ 272 (380)
T 3iz6_a 241 ------------------------------------------------AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT 272 (380)
T ss_dssp ------------------------------------------------CCEEECCCSSCCCEEEECTTSSEEEEECSSSC
T ss_pred ------------------------------------------------ceEEECCcCCCeEEEEEecCCCeEEEEcCCCe
Confidence 01123467888999999999999999999999
Q ss_pred EEEEEccCCceeecccc----------CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec----cCCCCCee
Q psy10063 784 SERYRDRKNKATAGFLL----------SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI----KGHFGPIN 849 (894)
Q Consensus 784 I~iwd~~~~~~~~~~~~----------~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l----~gH~~~V~ 849 (894)
|+|||++.++.+..+.. .+..++|+++|+++++++.++ .|+|||+..++++..+ .+|.+.|.
T Consensus 273 i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg----~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 348 (380)
T 3iz6_a 273 CRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG----DCYVWDTLLAEMVLNLGTLQNSHEGRIS 348 (380)
T ss_dssp EEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS----CEEEEETTTCCEEEEECCSCSSCCCCCC
T ss_pred EEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC----CEEEEECCCCceEEEEecccCCCCCceE
Confidence 99999998877554322 246788999999999998887 5999999999888766 68999999
Q ss_pred EEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063 850 SLAFHPDGKSYASGGEDGFVRLHTFDQAY 878 (894)
Q Consensus 850 ~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~ 878 (894)
+|+|+|||++|++||.||.|+||++....
T Consensus 349 ~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 349 CLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99999999999999999999999998664
No 15
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5e-38 Score=375.08 Aligned_cols=438 Identities=13% Similarity=0.115 Sum_probs=327.9
Q ss_pred ecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC----eEEEEecCCCCCC-eeEEEEcC--CCCEEEEEeCCCCc--
Q psy10063 406 TDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG----RELESISGHAKEP-INDMQFSK--DATMFITASHSQAV-- 476 (894)
Q Consensus 406 ~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg----~~~~~l~~h~~~~-V~~v~~sp--dg~~la~~~~d~~i-- 476 (894)
..|.+.|.+++|+|||++|++++ ++.|+|||+.++ +.+..+.+|.. . |.+++|+| ++++|++++.|+.+
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~-~~v~~~~~sp~~~~~~l~s~~~dg~v~v 92 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGS-SVVTTVKFSPIKGSQYLCSGDESGKVIV 92 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTT-SCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCC-ceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence 36899999999999999999998 789999999999 89999999998 8 99999999 99999999988755
Q ss_pred ------------------------cceEEEEEecCCCEEEEEECC----CCEEEEEcCCCcEEEEEeC-CCCeeEEEEcC
Q psy10063 477 ------------------------EPINDMQFSKDATMFITASKD----HTAKLFTTHDRQLLKTYTT-ERPVNSAALSP 527 (894)
Q Consensus 477 ------------------------~~V~~l~~spdg~~L~sgs~D----g~V~iwdl~~~~~~~~~~~-~~~v~~l~~sp 527 (894)
..|.+++|+|++++|++++.+ +.|++|| .++.+..+.. ...|.+++|+|
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECS
T ss_pred EeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECC
Confidence 368899999999999999988 6788887 5667777664 58899999999
Q ss_pred CCC-EEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC---CeEEEEEecC-CCEEEEEeCCCcEEEEEC
Q psy10063 528 ILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG---PINSLAFHPD-GKSYASGGEDGFLISNTL 602 (894)
Q Consensus 528 dg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~---~V~~l~~spd-g~~l~sgs~Dg~I~vwdl 602 (894)
+++ +|++++.++. |++||+..++.+..+.+|.. .|.+++|+|+ +++|++++.||.|++||+
T Consensus 171 ~~~~~l~~~~~d~~--------------v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~ 236 (615)
T 1pgu_A 171 SRPMRSMTVGDDGS--------------VVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG 236 (615)
T ss_dssp SSSCEEEEEETTTE--------------EEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEET
T ss_pred CCCcEEEEEeCCCc--------------EEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 998 7888888886 89999999999999999999 9999999999 999999999999999999
Q ss_pred CCCccc--------cCCCceeeeEECcCCcEE--EecCCeEEEEecccCC------C--------------CCCCeeeec
Q psy10063 603 SNGLDI--------SEGSFTSSSTQQPDGLVY--PSQGGHIHSLSSHSTS------S--------------TDTGGVFSG 652 (894)
Q Consensus 603 ~~~~~~--------~~~~~v~~~~~spdg~~l--~~~~g~i~~~~~~~~~------~--------------~d~~~i~sg 652 (894)
+.++.+ .+...+..+.|+ ++.++ ...+|.+..|...... . +++..++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 315 (615)
T 1pgu_A 237 KSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISL 315 (615)
T ss_dssp TTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEE
T ss_pred CCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEE
Confidence 887633 345678889999 88777 4446777777653211 0 134455666
Q ss_pred cccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe------------eeEEEcCCCCEEE
Q psy10063 653 SRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR------------NRMSINHSGTRLH 720 (894)
Q Consensus 653 s~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~------------~~~~~s~~g~~l~ 720 (894)
+ .++.+++|+....... .....+.+....+.. .. .+....++.+..+. ..+.+ .++..++
T Consensus 316 ~--~~g~i~~~d~~~~~~~--~~~~~~~~~v~~~~~--~~-l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~ 387 (615)
T 1pgu_A 316 S--LDGTLNFYELGHDEVL--KTISGHNKGITALTV--NP-LISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYS 387 (615)
T ss_dssp E--TTSCEEEEETTEEEEE--EEECCCSSCEEEEET--TT-TEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCE
T ss_pred E--CCCCEEEEECCCCcEE--EEEeCCCCCEEEEEe--cC-cEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEE
Confidence 5 6888999886542221 111123332222222 11 23333333332221 12233 2233333
Q ss_pred ecccCccccccCCcceeeccccCc--------------------------cccc-CCCCcceecCCCCceEEEeeCCCCC
Q psy10063 721 VNPFDEQQSVDASPLMTWGHIEGT--------------------------PFKL-DGSDTPILAGPVDIGFKMPEPPKRE 773 (894)
Q Consensus 721 v~~~~~~~~~~~~~l~~~~~~~g~--------------------------~~~~-dg~~~~~~~~h~~~v~~la~spdg~ 773 (894)
....++ .+.+|+...+. ++.. .++....+ .|...+.+++|+ ++
T Consensus 388 ~~~~d~-------~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~ 457 (615)
T 1pgu_A 388 SISWDD-------TLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSV-RLNSPGSAVSLS--QN 457 (615)
T ss_dssp EEETTT-------EEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEEC--SS
T ss_pred EEeCCC-------CEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeec-ccCCCceEEEEc--CC
Confidence 332222 23444332211 1111 22222222 367789999999 89
Q ss_pred EEEEecC-CCcEEEEEccCCcee----eccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC-CCCC
Q psy10063 774 KLALALA-DKVSERYRDRKNKAT----AGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG-HFGP 847 (894)
Q Consensus 774 ~Latgs~-Dg~I~iwd~~~~~~~----~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g-H~~~ 847 (894)
+|++++. |+.|++|++...+.. ..+...+..++|++++++|++++.++ .|+|||+..++++..+.+ |...
T Consensus 458 ~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg----~i~iw~~~~~~~~~~~~~~h~~~ 533 (615)
T 1pgu_A 458 YVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMG----KILLYDLQSREVKTSRWAFRTSK 533 (615)
T ss_dssp EEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTTEEEECCSCCCSSC
T ss_pred EEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCC----eEEEeeCCCCcceeEeecCCCCc
Confidence 9999999 999999999887654 22334455788999999999999987 599999999999999998 9999
Q ss_pred eeEEEEee----------CCcEEEEecCCCcEEEEecCcc-ccccccc
Q psy10063 848 INSLAFHP----------DGKSYASGGEDGFVRLHTFDQA-YFDYTFD 884 (894)
Q Consensus 848 V~~l~fSp----------dg~~LaS~s~Dg~V~vWdl~~~-~~~~~~~ 884 (894)
|.+|+|+| ++++||+++.||.|+||+++.+ +++..+.
T Consensus 534 v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 581 (615)
T 1pgu_A 534 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN 581 (615)
T ss_dssp EEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETT
T ss_pred eeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhh
Confidence 99999999 9999999999999999999987 4555443
No 16
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.5e-38 Score=345.70 Aligned_cols=288 Identities=17% Similarity=0.204 Sum_probs=246.6
Q ss_pred eEEEEEecCCCCEEEEEEccCC-CEEEEecCCCcEEEEecCC-----CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063 400 VVKMQVTDQSAKITSLLWGNLD-QYIITGHAKGDICTWDLRM-----GRELESISGHAKEPINDMQFSKDATMFITASHS 473 (894)
Q Consensus 400 ~~~~~l~~H~~~V~~l~~spdg-~~L~sgs~Dg~I~iWd~~t-----g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d 473 (894)
.++..|.+|.+.|.+|+|+|++ ++|++|+.|+.|+||++.. +..++.+.+|..
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~--------------------- 66 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH--------------------- 66 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSS---------------------
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcc---------------------
Confidence 3455789999999999999965 7999999999999999863 345778888887
Q ss_pred CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063 474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK 552 (894)
Q Consensus 474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~ 552 (894)
.|.+++|+++|++|++|+.|+.|+|||++++++++.+.+ ...|.+++|++++.+|++++.|+.
T Consensus 67 ----~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~------------ 130 (319)
T 3frx_A 67 ----IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT------------ 130 (319)
T ss_dssp ----CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSC------------
T ss_pred ----cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCe------------
Confidence 788899999999999999999999999999999988874 688999999999999999999997
Q ss_pred eeEEEEeccccceEEEccCCCCCeEEEEEecC------CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEE
Q psy10063 553 FDARFYHLIFEEEFARIKGHFGPINSLAFHPD------GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVY 626 (894)
Q Consensus 553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd------g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l 626 (894)
|++||++ ++++..+.+|...|.+++|+|. +.+|++++.|+.|++||++..+..
T Consensus 131 --i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~------------------ 189 (319)
T 3frx_A 131 --IKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE------------------ 189 (319)
T ss_dssp --EEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEE------------------
T ss_pred --EEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhh------------------
Confidence 8889986 5677888899999999999984 458999999999999998543200
Q ss_pred EecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEE
Q psy10063 627 PSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMA 706 (894)
Q Consensus 627 ~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~ 706 (894)
T Consensus 190 -------------------------------------------------------------------------------- 189 (319)
T 3frx_A 190 -------------------------------------------------------------------------------- 189 (319)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEE
Q psy10063 707 RNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSER 786 (894)
Q Consensus 707 ~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~i 786 (894)
..+.+|...|.+++|+|++++|++++.|+.|+|
T Consensus 190 -----------------------------------------------~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~i 222 (319)
T 3frx_A 190 -----------------------------------------------ADFIGHNSNINTLTASPDGTLIASAGKDGEIML 222 (319)
T ss_dssp -----------------------------------------------EEECCCCSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred -----------------------------------------------eeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 013357788999999999999999999999999
Q ss_pred EEccCCceeeccc--cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc--------CCCCCeeEEEEeeC
Q psy10063 787 YRDRKNKATAGFL--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK--------GHFGPINSLAFHPD 856 (894)
Q Consensus 787 wd~~~~~~~~~~~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~--------gH~~~V~~l~fSpd 856 (894)
||+...+.+..+. ..+..++|+|++.+++++..++ |+||++..+.++..+. .|...|.+|+|+||
T Consensus 223 wd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~-----i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd 297 (319)
T 3frx_A 223 WNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATG-----IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSAD 297 (319)
T ss_dssp EETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTE-----EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTT
T ss_pred EECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCC-----cEEEEeCcCeeeeccCccccccccCcCcceeEEEECCC
Confidence 9999888765544 3455788999999999887653 9999999887766554 35667999999999
Q ss_pred CcEEEEecCCCcEEEEecCcc
Q psy10063 857 GKSYASGGEDGFVRLHTFDQA 877 (894)
Q Consensus 857 g~~LaS~s~Dg~V~vWdl~~~ 877 (894)
|++|++|+.||.|+||++.++
T Consensus 298 g~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 298 GQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp SSEEEEEETTSCEEEEEEEEC
T ss_pred CCEEEEeecCceEEEEEEeec
Confidence 999999999999999998753
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=350.93 Aligned_cols=297 Identities=15% Similarity=0.157 Sum_probs=238.4
Q ss_pred EEEEEecCCC-CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE---ecCCCCCCeeEEEEcCCCCEEEEEeCCCCc
Q psy10063 401 VKMQVTDQSA-KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES---ISGHAKEPINDMQFSKDATMFITASHSQAV 476 (894)
Q Consensus 401 ~~~~l~~H~~-~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~---l~~h~~~~V~~v~~spdg~~la~~~~d~~i 476 (894)
+...+.+|.+ .|.+|+|+|+|++||+|+.|+.|+|||+..++.+.. ..+|..
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~------------------------ 62 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQR------------------------ 62 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSS------------------------
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCC------------------------
Confidence 4457889988 999999999999999999999999999998864322 256776
Q ss_pred cceEEEEEecCCCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063 477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF 553 (894)
Q Consensus 477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~ 553 (894)
.|.+|+|+|+|++|++|+.|+.|+|||+..+. ++..+. |...|.+++|+|++++|++++.|+.
T Consensus 63 -~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~------------- 128 (345)
T 3fm0_A 63 -TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKS------------- 128 (345)
T ss_dssp -CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-------------
T ss_pred -cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCe-------------
Confidence 78899999999999999999999999998764 556666 4688999999999999999999997
Q ss_pred eEEEEecccc---ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecC
Q psy10063 554 DARFYHLIFE---EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQG 630 (894)
Q Consensus 554 ~v~vwd~~~~---~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~ 630 (894)
|++||+..+ +++..+.+|...|.+++|+|++++|++|+.|+.|++|+++.++..
T Consensus 129 -v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~---------------------- 185 (345)
T 3fm0_A 129 -VWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV---------------------- 185 (345)
T ss_dssp -EEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE----------------------
T ss_pred -EEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE----------------------
Confidence 788888765 345677899999999999999999999999999999987432100
Q ss_pred CeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeE
Q psy10063 631 GHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRM 710 (894)
Q Consensus 631 g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 710 (894)
T Consensus 186 -------------------------------------------------------------------------------- 185 (345)
T 3fm0_A 186 -------------------------------------------------------------------------------- 185 (345)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEcc
Q psy10063 711 SINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDR 790 (894)
Q Consensus 711 ~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~ 790 (894)
....+.+|...|.+|+|+|++++||+++.|+.|+||+..
T Consensus 186 -----------------------------------------~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 186 -----------------------------------------CCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp -----------------------------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred -----------------------------------------EEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 001234678889999999999999999999999999964
Q ss_pred CCce---------------eec----cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc---------eeeecc
Q psy10063 791 KNKA---------------TAG----FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE---------EFARIK 842 (894)
Q Consensus 791 ~~~~---------------~~~----~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~---------~l~~l~ 842 (894)
.... +.. +...+..++|++++..+++++.|+ .|+||++..+. ....+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~----~i~vw~~~~~~~~~~~~~~~~~~~~~ 300 (345)
T 3fm0_A 225 LPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDD----AIRVFQEDPNSDPQQPTFSLTAHLHQ 300 (345)
T ss_dssp CTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTS----CEEEEEECTTSCTTSCCEEEEEEETT
T ss_pred cCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCC----eEEEEEeCCCCCcceeeEEEEeeecc
Confidence 3211 111 223345788999999999999987 59999987543 123346
Q ss_pred CCCCCeeEEEEeeCC-cEEEEecCCCcEEEEecCcccccccc
Q psy10063 843 GHFGPINSLAFHPDG-KSYASGGEDGFVRLHTFDQAYFDYTF 883 (894)
Q Consensus 843 gH~~~V~~l~fSpdg-~~LaS~s~Dg~V~vWdl~~~~~~~~~ 883 (894)
+|...|.+|+|+|++ .+||+||.||.|+||++..++....+
T Consensus 301 ~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 301 AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 899999999999998 59999999999999999988765543
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.2e-37 Score=339.62 Aligned_cols=290 Identities=20% Similarity=0.258 Sum_probs=253.2
Q ss_pred CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063 399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP 478 (894)
Q Consensus 399 ~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~ 478 (894)
..++..+.+|.+.|.+++|+|+|++|++|+.||.|+||++..++.+..+.+|.. .
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~-------------------------~ 67 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-------------------------G 67 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-------------------------C
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCC-------------------------c
Confidence 456778999999999999999999999999999999999999999999999987 7
Q ss_pred eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063 479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF 557 (894)
Q Consensus 479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v 557 (894)
|.+++|+|++++|++|+.|+.|+|||+++++++..+.. ...|.+++|+|++.+|++++.++. |++
T Consensus 68 v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~--------------i~i 133 (312)
T 4ery_A 68 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES--------------VRI 133 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSC--------------EEE
T ss_pred eEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCc--------------EEE
Confidence 88899999999999999999999999999999988875 578999999999999999999997 899
Q ss_pred EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEe
Q psy10063 558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLS 637 (894)
Q Consensus 558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~ 637 (894)
||++.++.+..+..|...|.+++|++++++|++++.||.|++||++.++.+. .
T Consensus 134 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~-------------------------~-- 186 (312)
T 4ery_A 134 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK-------------------------T-- 186 (312)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-------------------------E--
T ss_pred EECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceee-------------------------E--
Confidence 9999999999999999999999999999999999999999999986542110 0
Q ss_pred cccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCC
Q psy10063 638 SHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGT 717 (894)
Q Consensus 638 ~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~ 717 (894)
T Consensus 187 -------------------------------------------------------------------------------- 186 (312)
T 4ery_A 187 -------------------------------------------------------------------------------- 186 (312)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec
Q psy10063 718 RLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG 797 (894)
Q Consensus 718 ~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~ 797 (894)
+...+...+.+++|+|++++|++++.|+.|++||+..++.+..
T Consensus 187 -------------------------------------~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 229 (312)
T 4ery_A 187 -------------------------------------LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 229 (312)
T ss_dssp -------------------------------------ECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE
T ss_pred -------------------------------------EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 0011234567899999999999999999999999998887665
Q ss_pred cccCC-----CceEee-cCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEec--CCCcE
Q psy10063 798 FLLSC-----PDFLFD-FDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG--EDGFV 869 (894)
Q Consensus 798 ~~~~~-----~~~~fS-~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s--~Dg~V 869 (894)
+.... ....++ +++.++++++.|+ .|+|||+..++++..+.+|.+.|.+++|+|++.+|++++ .|+.|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg----~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i 305 (312)
T 4ery_A 230 YTGHKNEKYCIFANFSVTGGKWIVSGSEDN----LVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 305 (312)
T ss_dssp ECSSCCSSSCCCEEEECSSSCEEEECCTTS----CEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCE
T ss_pred EEecCCceEEEEEEEEeCCCcEEEEECCCC----EEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccE
Confidence 43221 122344 5677888888887 599999999999999999999999999999999999986 69999
Q ss_pred EEEecC
Q psy10063 870 RLHTFD 875 (894)
Q Consensus 870 ~vWdl~ 875 (894)
+||+.+
T Consensus 306 ~~W~~d 311 (312)
T 4ery_A 306 KLWKSD 311 (312)
T ss_dssp EEEECC
T ss_pred EEecCC
Confidence 999975
No 19
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-37 Score=344.85 Aligned_cols=318 Identities=24% Similarity=0.375 Sum_probs=265.1
Q ss_pred CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063 399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP 478 (894)
Q Consensus 399 ~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~ 478 (894)
....+.|.+|.+.|.+|+|+|+|++|++|+.||.|+|||+.+++.+..+.+|.. .
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~-------------------------~ 76 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTG-------------------------T 76 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSS-------------------------C
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCC-------------------------c
Confidence 355567899999999999999999999999999999999999999999999988 7
Q ss_pred eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECC-----CCeEEEeccCcccee
Q psy10063 479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQ-----EAREVTTTSTKVGKF 553 (894)
Q Consensus 479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~-----~~~~v~~~~~~~~~~ 553 (894)
|.+++|+|++++|++++.||.|+|||+++++++..+.+...+.+++|+|++++|++++.+ +.+.+|.........
T Consensus 77 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~ 156 (369)
T 3zwl_B 77 IWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATH 156 (369)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTC
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccce
Confidence 888899999999999999999999999999999999999999999999999999999988 774444443332221
Q ss_pred eEEEEeccccceEEEccCCCC--CeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063 554 DARFYHLIFEEEFARIKGHFG--PINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG 631 (894)
Q Consensus 554 ~v~vwd~~~~~~~~~l~~h~~--~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g 631 (894)
.+... ....+..+..|.+ .|.+++|++++++|++++.||.|++||++.....
T Consensus 157 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----------------------- 210 (369)
T 3zwl_B 157 ELTKV---SEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEY----------------------- 210 (369)
T ss_dssp CEEEE---CSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEE-----------------------
T ss_pred eeccc---ccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEe-----------------------
Confidence 11111 1234455566776 9999999999999999999999999998642100
Q ss_pred eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063 632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS 711 (894)
Q Consensus 632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 711 (894)
T Consensus 211 -------------------------------------------------------------------------------- 210 (369)
T 3zwl_B 211 -------------------------------------------------------------------------------- 210 (369)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC
Q psy10063 712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK 791 (894)
Q Consensus 712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~ 791 (894)
...+..|...|.+++|+|++.+|++++.|+.|++||++.
T Consensus 211 -----------------------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 211 -----------------------------------------VDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp -----------------------------------------EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred -----------------------------------------EEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 001233566789999999999999999999999999999
Q ss_pred Cceeeccc--cCCCceEeecCCCeEEEEecCCC----------CceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcE
Q psy10063 792 NKATAGFL--LSCPDFLFDFDTTREVTTTSTKV----------GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKS 859 (894)
Q Consensus 792 ~~~~~~~~--~~~~~~~fS~dg~~l~~as~d~~----------g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~ 859 (894)
++.+..+. ..+..++|+++++++++++.++. +.+.|++||+..++++..+.+|...|.+|+|+||+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 329 (369)
T 3zwl_B 250 LQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTS 329 (369)
T ss_dssp CCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSE
T ss_pred CceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCE
Confidence 88766554 33457789999999999987752 2225999999999999999999999999999999999
Q ss_pred EEEecCCCcEEEEecCccccccccccCcc
Q psy10063 860 YASGGEDGFVRLHTFDQAYFDYTFDISEE 888 (894)
Q Consensus 860 LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~ 888 (894)
|++++.||.|+||+++.+.+.++++.++.
T Consensus 330 l~s~~~dg~v~iw~~~~~~~~~~~~~~~~ 358 (369)
T 3zwl_B 330 YASGGEDGFIRLHHFEKSYFDFKYDVEKA 358 (369)
T ss_dssp EEEEETTSEEEEEEECHHHHTCCCHHHHH
T ss_pred EEEEcCCCeEEEEECccccchhHHHHHHH
Confidence 99999999999999999988888765443
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2e-37 Score=343.19 Aligned_cols=287 Identities=18% Similarity=0.224 Sum_probs=236.3
Q ss_pred EEEEEecCCCCEEEEEE-----cc-CCCEEEEecCCCcEEEEecCC-------CeEEEEecCCCCCCeeEEEEcCCCCEE
Q psy10063 401 VKMQVTDQSAKITSLLW-----GN-LDQYIITGHAKGDICTWDLRM-------GRELESISGHAKEPINDMQFSKDATMF 467 (894)
Q Consensus 401 ~~~~l~~H~~~V~~l~~-----sp-dg~~L~sgs~Dg~I~iWd~~t-------g~~~~~l~~h~~~~V~~v~~spdg~~l 467 (894)
+...|.+|.+.|.+|+| ++ ++++|++|+.|+.|+|||+.. +.++..+.+|..
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~--------------- 77 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNH--------------- 77 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSS---------------
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCC---------------
Confidence 44578999999999999 77 999999999999999999974 345677888887
Q ss_pred EEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063 468 ITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTT 546 (894)
Q Consensus 468 a~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~ 546 (894)
.|.+++|+|++.+|++|+.|+.|+|||+++++++..+. |...|.+++|+|++++|++++.++.
T Consensus 78 ----------~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~------ 141 (343)
T 2xzm_R 78 ----------FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAERE------ 141 (343)
T ss_dssp ----------CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSC------
T ss_pred ----------ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCE------
Confidence 78889999999999999999999999999999998887 4689999999999999999999997
Q ss_pred cCccceeeEEEEeccccceEEEc---cCCCCCeEEEEEecCC----------CEEEEEeCCCcEEEEECCCCccccCCCc
Q psy10063 547 STKVGKFDARFYHLIFEEEFARI---KGHFGPINSLAFHPDG----------KSYASGGEDGFLISNTLSNGLDISEGSF 613 (894)
Q Consensus 547 ~~~~~~~~v~vwd~~~~~~~~~l---~~h~~~V~~l~~spdg----------~~l~sgs~Dg~I~vwdl~~~~~~~~~~~ 613 (894)
|++||+.. .....+ .+|...|.+++|+|++ .+|++++.||.|++||... +.
T Consensus 142 --------i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~------ 205 (343)
T 2xzm_R 142 --------IKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-QI------ 205 (343)
T ss_dssp --------EEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-EE------
T ss_pred --------EEEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-ce------
Confidence 78888873 333333 3789999999999987 7899999999999998421 00
Q ss_pred eeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcc
Q psy10063 614 TSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQ 693 (894)
Q Consensus 614 v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 693 (894)
T Consensus 206 -------------------------------------------------------------------------------- 205 (343)
T 2xzm_R 206 -------------------------------------------------------------------------------- 205 (343)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC
Q psy10063 694 SVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE 773 (894)
Q Consensus 694 ~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~ 773 (894)
...+.+|...|.+++|+|+++
T Consensus 206 -----------------------------------------------------------~~~~~~h~~~v~~~~~s~~g~ 226 (343)
T 2xzm_R 206 -----------------------------------------------------------RYTFKAHESNVNHLSISPNGK 226 (343)
T ss_dssp -----------------------------------------------------------EEEEECCSSCEEEEEECTTSS
T ss_pred -----------------------------------------------------------eEEEcCccccceEEEECCCCC
Confidence 001235777899999999999
Q ss_pred EEEEecCCCcEEEEEccCCc-eeec--cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee--ecc------
Q psy10063 774 KLALALADKVSERYRDRKNK-ATAG--FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA--RIK------ 842 (894)
Q Consensus 774 ~Latgs~Dg~I~iwd~~~~~-~~~~--~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~--~l~------ 842 (894)
+||+|+.|+.|+|||+.... .... ....+..++|+|++.+++++. ++ .|+||++..++.+. .+.
T Consensus 227 ~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-d~----~v~iw~~~~~~~~~~~~~~~~~~~~ 301 (343)
T 2xzm_R 227 YIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-DQ----GVKIFNLMTQSKAPVCTIEAEPITK 301 (343)
T ss_dssp EEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-SS----CEEEEESSSCCSCSEEECCCCSGGG
T ss_pred EEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC-CC----CEEEEEeCCCCCCceEEeecCcchh
Confidence 99999999999999985433 2222 223456788999998876554 43 49999998876543 333
Q ss_pred -----CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063 843 -----GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY 878 (894)
Q Consensus 843 -----gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~ 878 (894)
+|...|.+|+|+|+|++|++|+.||.|+||+++.+.
T Consensus 302 ~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 302 AEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp BTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred hhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 788999999999999999999999999999997653
No 21
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-37 Score=381.50 Aligned_cols=454 Identities=12% Similarity=0.090 Sum_probs=319.7
Q ss_pred ccceeeeeccCccEEEecCCC-eEEE---------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec
Q psy10063 379 SVDRLNSMSPAARKLATNAEP-VVKM---------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS 448 (894)
Q Consensus 379 ~~~~~~~~s~dg~~l~~~~~~-~~~~---------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~ 448 (894)
.....++|+|||++|+.+..+ .+++ ....|...|.+|+|+| |++|++++.|+.|+|||+.+++++..+.
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~ 96 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF 96 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc
Confidence 445677899999999887654 3332 2345889999999999 8899999999999999999999998886
Q ss_pred CCCCCCeeEEEEcCCCCEEEEEeCCCCc-----------------------------cceEEEEEecC-CCEEEEEECCC
Q psy10063 449 GHAKEPINDMQFSKDATMFITASHSQAV-----------------------------EPINDMQFSKD-ATMFITASKDH 498 (894)
Q Consensus 449 ~h~~~~V~~v~~spdg~~la~~~~d~~i-----------------------------~~V~~l~~spd-g~~L~sgs~Dg 498 (894)
|.. .|.+++|+|++++|++++.|+.+ +.|.+|+|+|+ +.+|++|+.||
T Consensus 97 -~~~-~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg 174 (902)
T 2oaj_A 97 -VPG-KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYV 174 (902)
T ss_dssp -CSS-CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSC
T ss_pred -CCC-CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCC
Confidence 555 89999999999999999988765 25789999995 57899999999
Q ss_pred CEEEEEcCCCcEEEEEeCC-------------------CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063 499 TAKLFTTHDRQLLKTYTTE-------------------RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 499 ~V~iwdl~~~~~~~~~~~~-------------------~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
.| |||++.+++++.+..+ ..|.+++|+|+|++|++++.|+. |++||
T Consensus 175 ~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~--------------i~lWd 239 (902)
T 2oaj_A 175 TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS--------------LVFWD 239 (902)
T ss_dssp EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC--------------EEEEE
T ss_pred cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe--------------EEEEE
Confidence 99 9999999999888754 67999999999999999999997 88899
Q ss_pred ccccceEEE--c---cC-------------CCCCeEEEEEec----CC-CEEEEEeCC-----CcEEEEECCC-------
Q psy10063 560 LIFEEEFAR--I---KG-------------HFGPINSLAFHP----DG-KSYASGGED-----GFLISNTLSN------- 604 (894)
Q Consensus 560 ~~~~~~~~~--l---~~-------------h~~~V~~l~~sp----dg-~~l~sgs~D-----g~I~vwdl~~------- 604 (894)
++.++++.. + .+ |...|.+++|++ ++ .+|++|+.| +.|++|++..
T Consensus 240 ~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~ 319 (902)
T 2oaj_A 240 ANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSIT 319 (902)
T ss_dssp TTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGC
T ss_pred CCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCcccc
Confidence 988887653 2 12 345799999964 43 467777665 3788888521
Q ss_pred -------------Ccc-c--cCCCceeeeEECcC----------C--cEEEecCCeEEEEecccC---------------
Q psy10063 605 -------------GLD-I--SEGSFTSSSTQQPD----------G--LVYPSQGGHIHSLSSHST--------------- 641 (894)
Q Consensus 605 -------------~~~-~--~~~~~v~~~~~spd----------g--~~l~~~~g~i~~~~~~~~--------------- 641 (894)
... + .....+..+.+.++ + .+....+|.+..|.....
T Consensus 320 s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~ 399 (902)
T 2oaj_A 320 SYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSW 399 (902)
T ss_dssp CHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTT
T ss_pred chhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccc
Confidence 011 1 12344445554431 1 122444555665543110
Q ss_pred -------------------------------------------CCCCCCeeeeccccCCCceEEechhhHHHhhhccccc
Q psy10063 642 -------------------------------------------SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSIN 678 (894)
Q Consensus 642 -------------------------------------------~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~ 678 (894)
..+++..+++|+ .|+.|++|+........
T Consensus 400 ~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs--~DgtVrlWd~~~g~~~~------ 471 (902)
T 2oaj_A 400 LRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGH--SNGSVRIYDASHGDIQD------ 471 (902)
T ss_dssp BTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEE--TTSEEEEEESSCCTTTT------
T ss_pred cCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEec--CCCcEEEEECCCccccC------
Confidence 012344455555 56677777644321100
Q ss_pred CCCCeEEeeccCCcceeEec--cCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCccccc--------
Q psy10063 679 HSGTRLHVNPFDEQQSVELT--KDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKL-------- 748 (894)
Q Consensus 679 ~~g~~~~~~~~~~~~~~~~s--~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~-------- 748 (894)
...+.+ .+. ...........++|+++|+.++++..++. +++|+...+..+..
T Consensus 472 --~~~~~~---------~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dgt-------V~lwd~~~~~~~~~~~~~~~~~ 533 (902)
T 2oaj_A 472 --NASFEV---------NLSRTLNKAKELAVDKISFAAETLELAVSIETGD-------VVLFKYEVNQFYSVENRPESGD 533 (902)
T ss_dssp --TBCEEE---------EHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSC-------EEEEEEEECCC-----------
T ss_pred --CceEEe---------echhhcCCCCCCceeEEEecCCCCeEEEEecCcE-------EEEEEecCccccCccccCCCcc
Confidence 000000 000 00011123455788888888888776654 55665444321100
Q ss_pred ------------------------C------CCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee--
Q psy10063 749 ------------------------D------GSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA-- 796 (894)
Q Consensus 749 ------------------------d------g~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~-- 796 (894)
+ ...+..+.+|.+.|.+|+|+||| +||+|+.|+.|+|||++....+.
T Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~ 612 (902)
T 2oaj_A 534 LEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYME 612 (902)
T ss_dssp ----CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred cceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEe
Confidence 0 01245677899999999999999 99999999999999988776543
Q ss_pred -------ccccCCCceEee-----cCC---CeEEEEecCCCCceeEEEeec---CCcceeeeccCCC-----CCeeEEE-
Q psy10063 797 -------GFLLSCPDFLFD-----FDT---TREVTTTSTKVGKFDARFYHL---IFEEEFARIKGHF-----GPINSLA- 852 (894)
Q Consensus 797 -------~~~~~~~~~~fS-----~dg---~~l~~as~d~~g~~~I~vwd~---~tg~~l~~l~gH~-----~~V~~l~- 852 (894)
++...+.+++|+ +|| ++|++++.|+ .|++||+ .+|+++..|.+|. ++|.+++
T Consensus 613 ~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~----tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~ 688 (902)
T 2oaj_A 613 NIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMG----EVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDA 688 (902)
T ss_dssp EGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTS----EEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEE
T ss_pred ehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCC----cEEEEEEecCCCCcEEEEecCceecCCCCceEEEEe
Confidence 222335678899 886 7899999987 6999999 8899988888874 7788887
Q ss_pred Ee----------------------eCCcEEEEecCCCcEEEEecCcccccccc
Q psy10063 853 FH----------------------PDGKSYASGGEDGFVRLHTFDQAYFDYTF 883 (894)
Q Consensus 853 fS----------------------pdg~~LaS~s~Dg~V~vWdl~~~~~~~~~ 883 (894)
|+ ++|.+|+++ |..||||++..+++..+.
T Consensus 689 ~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~ 739 (902)
T 2oaj_A 689 FSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKG 739 (902)
T ss_dssp EETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEE
T ss_pred EecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccccceeeE
Confidence 76 556655555 678999999988777655
No 22
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.3e-38 Score=346.76 Aligned_cols=291 Identities=11% Similarity=0.114 Sum_probs=225.9
Q ss_pred cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec----CCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063 407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS----GHAKEPINDMQFSKDATMFITASHSQAVEPINDM 482 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~----~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l 482 (894)
.|...|.+++|+|||++|++++ |+.+++||.. +..+. .+.. ......+..+ ..|.+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~----~~~~~~~~~~~~~-~~~~~~~~~~-------------~~v~~~ 88 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGS----LWLFKDPCAAPNE-GFCSAGVQTE-------------AGVADL 88 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEE----EEEESSGGGTTCG-GGCSEEEEES-------------SCEEEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeece----eeeeccccccCCc-ceeeeeeccC-------------CCEEEE
Confidence 4677899999999999999887 7789999832 22222 1111 1111111111 169999
Q ss_pred EEecCCCEEEEEECCCCEEEEEcCCCcEEEEE-----eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063 483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTY-----TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF 557 (894)
Q Consensus 483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~-----~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v 557 (894)
+|++++ +|++|+.||.|+|||+++++++..+ .|.+.|.+|+|+|+|++|++++.++. |++
T Consensus 89 ~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~--------------i~i 153 (344)
T 4gqb_B 89 TWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDIC--------------IKV 153 (344)
T ss_dssp EEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSC--------------EEE
T ss_pred EEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCe--------------EEE
Confidence 999985 6889999999999999998765443 35689999999999999999999997 899
Q ss_pred EeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063 558 YHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL 636 (894)
Q Consensus 558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~ 636 (894)
||+.++++++.+.+|.+.|.+++|++++. +|++|+.||.|+|||++.++.+.. +
T Consensus 154 wd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~-------------------------~ 208 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQ-------------------------I 208 (344)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEE-------------------------C
T ss_pred EECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeee-------------------------e
Confidence 99999999999999999999999999885 789999999999999976532100 0
Q ss_pred ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063 637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG 716 (894)
Q Consensus 637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g 716 (894)
T Consensus 209 -------------------------------------------------------------------------------- 208 (344)
T 4gqb_B 209 -------------------------------------------------------------------------------- 208 (344)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCCcee
Q psy10063 717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKNKAT 795 (894)
Q Consensus 717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~~~ 795 (894)
....|...+.+++|+|+ +.+|++|+.|+.|+|||++.++.+
T Consensus 209 --------------------------------------~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~ 250 (344)
T 4gqb_B 209 --------------------------------------GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV 250 (344)
T ss_dssp --------------------------------------C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC
T ss_pred --------------------------------------ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE
Confidence 00113345678899985 678899999999999999988775
Q ss_pred ec---cccCCCceEeecCCC-eEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCc-EEEEecCCCcEE
Q psy10063 796 AG---FLLSCPDFLFDFDTT-REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFVR 870 (894)
Q Consensus 796 ~~---~~~~~~~~~fS~dg~-~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~-~LaS~s~Dg~V~ 870 (894)
.. +...+..++|+|++. +|++++.|+ .|+|||+..++++ .+.+|.+.|.+|+|+|+++ +|++||.||.|+
T Consensus 251 ~~~~~h~~~v~~v~fsp~g~~~lasgs~D~----~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 251 LSSAVHSQCVTGLVFSPHSVPFLASLSEDC----SLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp EEEECCSSCEEEEEECSSSSCCEEEEETTS----CEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEEcCCCCCEEEEEEccCCCeEEEEEeCCC----eEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 54 344566788999985 678888887 5999999988765 5789999999999999986 577999999999
Q ss_pred EEecCcccc
Q psy10063 871 LHTFDQAYF 879 (894)
Q Consensus 871 vWdl~~~~~ 879 (894)
+|++..+.+
T Consensus 326 ~w~v~~~~~ 334 (344)
T 4gqb_B 326 HHVVPTEPL 334 (344)
T ss_dssp EEECCC---
T ss_pred EEECCCCCC
Confidence 999987644
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-37 Score=347.07 Aligned_cols=287 Identities=14% Similarity=0.168 Sum_probs=224.4
Q ss_pred EecCCCCEEEEEEccCCCEEEEecC------CCcEEEEecCCCeEEE----EecCCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063 405 VTDQSAKITSLLWGNLDQYIITGHA------KGDICTWDLRMGRELE----SISGHAKEPINDMQFSKDATMFITASHSQ 474 (894)
Q Consensus 405 l~~H~~~V~~l~~spdg~~L~sgs~------Dg~I~iWd~~tg~~~~----~l~~h~~~~V~~v~~spdg~~la~~~~d~ 474 (894)
...|.+.|.+|+|||||++|++|+. |+.|++|+..+++... ...+|..
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~---------------------- 95 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEA---------------------- 95 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSS----------------------
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCC----------------------
Confidence 3579999999999999999999997 6789999987775432 2234554
Q ss_pred CccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE-----EeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCc
Q psy10063 475 AVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT-----YTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTK 549 (894)
Q Consensus 475 ~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~-----~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~ 549 (894)
.|.+|+|+|+++ |++++.||.|+|||+.+++.+.. ..|...|.+|+|+|+|++|++++.++.
T Consensus 96 ---~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~--------- 162 (357)
T 4g56_B 96 ---GVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFS--------- 162 (357)
T ss_dssp ---CEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSC---------
T ss_pred ---CEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCe---------
Confidence 688888998875 55678899999999998775432 235688999999999999999999997
Q ss_pred cceeeEEEEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEe
Q psy10063 550 VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPS 628 (894)
Q Consensus 550 ~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~ 628 (894)
|++||+..++++..+.+|...|.+|+|++++. +|++++.||.|+|||++.++.+..
T Consensus 163 -----v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~------------------ 219 (357)
T 4g56_B 163 -----VKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR------------------ 219 (357)
T ss_dssp -----EEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB------------------
T ss_pred -----EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee------------------
Confidence 89999999999999999999999999999875 789999999999999876432100
Q ss_pred cCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEee
Q psy10063 629 QGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARN 708 (894)
Q Consensus 629 ~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~ 708 (894)
T Consensus 220 -------------------------------------------------------------------------------- 219 (357)
T 4g56_B 220 -------------------------------------------------------------------------------- 219 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEE
Q psy10063 709 RMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERY 787 (894)
Q Consensus 709 ~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iw 787 (894)
.....|...+.+++|+|+ +.+|++|+.|+.|+||
T Consensus 220 ---------------------------------------------~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~w 254 (357)
T 4g56_B 220 ---------------------------------------------IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLV 254 (357)
T ss_dssp ---------------------------------------------CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEE
T ss_pred ---------------------------------------------eeeccccccccchhhhhcccceEEEeecccceeEE
Confidence 001124456789999998 5688999999999999
Q ss_pred EccCCceeecc---ccCCCceEeecCCC-eEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee-CCcEEEE
Q psy10063 788 RDRKNKATAGF---LLSCPDFLFDFDTT-REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYAS 862 (894)
Q Consensus 788 d~~~~~~~~~~---~~~~~~~~fS~dg~-~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp-dg~~LaS 862 (894)
|++.++.+..+ ...+..++|+|++. +|++++.|+ .|+|||++.++++..+ +|.+.|.+|+|+| |+++||+
T Consensus 255 d~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~----~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s 329 (357)
T 4g56_B 255 NIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDC----TVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTT 329 (357)
T ss_dssp ESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTS----CEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEE
T ss_pred ECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCC----EEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEE
Confidence 99988765443 34456788999985 677888877 5999999999887655 8999999999998 8999999
Q ss_pred ecCCCcEEEEecCcccc
Q psy10063 863 GGEDGFVRLHTFDQAYF 879 (894)
Q Consensus 863 ~s~Dg~V~vWdl~~~~~ 879 (894)
||.||.|+||++.....
T Consensus 330 ~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 330 VGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EETTSCEEEEECC----
T ss_pred EcCCCeEEEEECCCCCc
Confidence 99999999999976543
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8.3e-37 Score=345.04 Aligned_cols=308 Identities=16% Similarity=0.219 Sum_probs=243.7
Q ss_pred EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063 405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF 484 (894)
Q Consensus 405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~ 484 (894)
..+|.+.|.|++|+|||++|++|+ |+.++||++.+|+.+..+..|.. ... +...+...........|.+++|
T Consensus 60 ~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~-~~~------~~~~~~~~~~~~~~~~v~~v~~ 131 (393)
T 1erj_A 60 SLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSA-ANK------DPENLNTSSSPSSDLYIRSVCF 131 (393)
T ss_dssp EEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC------------------------CCCCBEEEEEE
T ss_pred ecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccc-ccc------ccccccccccCCCceeEEEEEE
Confidence 347999999999999999999987 67999999999999988887653 110 0011111111111125999999
Q ss_pred ecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063 485 SKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE 563 (894)
Q Consensus 485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~ 563 (894)
+|+|++|++|+.|+.|+|||++.++++..+.+ ...|.+++|+|++++|++++.++. |++||++.+
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~--------------v~iwd~~~~ 197 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT--------------VRIWDLRTG 197 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE--------------EEEEETTTT
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCc--------------EEEEECCCC
Confidence 99999999999999999999999999988874 578999999999999999999996 899999999
Q ss_pred ceEEEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063 564 EEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS 642 (894)
Q Consensus 564 ~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~ 642 (894)
+++..+. |...|.+++|+| ++++|++|+.||.|++||++.++.+. .+..
T Consensus 198 ~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~-------------------------~~~~---- 247 (393)
T 1erj_A 198 QCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE-------------------------RLDS---- 247 (393)
T ss_dssp EEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEE-------------------------EEC-----
T ss_pred eeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE-------------------------eecc----
Confidence 8887775 567799999999 89999999999999999986543110 0000
Q ss_pred CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEec
Q psy10063 643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN 722 (894)
Q Consensus 643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~ 722 (894)
T Consensus 248 -------------------------------------------------------------------------------- 247 (393)
T 1erj_A 248 -------------------------------------------------------------------------------- 247 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce--------
Q psy10063 723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA-------- 794 (894)
Q Consensus 723 ~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~-------- 794 (894)
......+|...|.+++|+|++++|++|+.|+.|++||++....
T Consensus 248 -----------------------------~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 298 (393)
T 1erj_A 248 -----------------------------ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 298 (393)
T ss_dssp ----------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred -----------------------------cccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCC
Confidence 0001235788899999999999999999999999999876432
Q ss_pred -------eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee------CCcEEE
Q psy10063 795 -------TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP------DGKSYA 861 (894)
Q Consensus 795 -------~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp------dg~~La 861 (894)
+..+...+..++|++++.+|++++.|+ .|+|||+..++++..+.+|...|.+|+|++ ++.+||
T Consensus 299 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~----~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~ 374 (393)
T 1erj_A 299 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR----GVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFA 374 (393)
T ss_dssp --CEEEEEECCSSCEEEEEECGGGCEEEEEETTS----EEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEE
T ss_pred CCcceEEEecccCcEEEEEECCCCCEEEEEeCCC----eEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEE
Confidence 122333345678999999999999987 699999999999999999999999999986 689999
Q ss_pred EecCCCcEEEEecCcc
Q psy10063 862 SGGEDGFVRLHTFDQA 877 (894)
Q Consensus 862 S~s~Dg~V~vWdl~~~ 877 (894)
+||.||.|+||+++..
T Consensus 375 sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 375 TGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEETTSEEEEEEEEEC
T ss_pred EECCCCcEEECccccc
Confidence 9999999999998643
No 25
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.8e-36 Score=374.69 Aligned_cols=410 Identities=17% Similarity=0.169 Sum_probs=313.7
Q ss_pred CccceeeeeccCccEEEecCCC-----------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE
Q psy10063 378 LSVDRLNSMSPAARKLATNAEP-----------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES 446 (894)
Q Consensus 378 ~~~~~~~~~s~dg~~l~~~~~~-----------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~ 446 (894)
......++|+|||++|+.+..+ .....+.+|.+.|.+++|+|++++|++|+.||.|+|||+.+++.+..
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD 92 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 3445667888999888876532 23336778999999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------------cceEEEEEec-CCCEEEEEECCCCEEEEEcC
Q psy10063 447 ISGHAKEPINDMQFSKDATMFITASHSQAV-------------------EPINDMQFSK-DATMFITASKDHTAKLFTTH 506 (894)
Q Consensus 447 l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------------------~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~ 506 (894)
+.+|.+ .|.+++|+|++.+|++++.++.+ ..|.+++|+| ++.+|++++.||.|++||+.
T Consensus 93 ~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~ 171 (814)
T 3mkq_A 93 FEAHPD-YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (814)
T ss_dssp EECCSS-CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred EecCCC-CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 999998 99999999999999999999876 4799999999 89999999999999999999
Q ss_pred CCcEEEEEeC--CCCeeEEEEcC--CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEe
Q psy10063 507 DRQLLKTYTT--ERPVNSAALSP--ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH 582 (894)
Q Consensus 507 ~~~~~~~~~~--~~~v~~l~~sp--dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~s 582 (894)
.++....+.. ...+.+++|+| ++.+|++++.++. |++||+..++.+..+.+|...|.+++|+
T Consensus 172 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~--------------i~~~d~~~~~~~~~~~~~~~~v~~~~~~ 237 (814)
T 3mkq_A 172 QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT--------------IKIWDYQTKSCVATLEGHMSNVSFAVFH 237 (814)
T ss_dssp CSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE--------------EEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred CCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE--------------EEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 8887777764 37899999999 9999999999986 8999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEECcCCc---EEEecCCeEEEEecccCCCCCCCeeeecccc
Q psy10063 583 PDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGL---VYPSQGGHIHSLSSHSTSSTDTGGVFSGSRV 655 (894)
Q Consensus 583 pdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~---~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~ 655 (894)
|++++|++++.||.|++||+..++.+. ....+..++|+|+|. +....++.+..+.....
T Consensus 238 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 303 (814)
T 3mkq_A 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND-------------- 303 (814)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC--------------
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC--------------
Confidence 999999999999999999998876442 345677788888875 23333444433332110
Q ss_pred CCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCC-c
Q psy10063 656 DDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDAS-P 734 (894)
Q Consensus 656 ~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~-~ 734 (894)
. ..+.+.++|..++....+........ .
T Consensus 304 ------------------------------------~---------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 332 (814)
T 3mkq_A 304 ------------------------------------E---------------PTLSLDPVGKLVWSGGKNAAASDIFTAV 332 (814)
T ss_dssp ------------------------------------S---------------CCEEECSSSEEEEECCTTSCTTCEEEEE
T ss_pred ------------------------------------C---------------ceeEECCCCCEEEECcccccceeeeeee
Confidence 0 01222333333333221111000000 0
Q ss_pred c-eeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCe
Q psy10063 735 L-MTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTR 813 (894)
Q Consensus 735 l-~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~ 813 (894)
+ ..|....+... ......+..+...+.+++|+|+|++|++++ |+.+++|++....... ...+..++|+|||++
T Consensus 333 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~~~--~~~i~~~~~spdg~~ 406 (814)
T 3mkq_A 333 IRGNEEVEQDEPL---SLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRNKA--FGKCQDFVWGPDSNS 406 (814)
T ss_dssp CCSCCCCCSSSCB---CCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE--EEECSEEEECTTSSC
T ss_pred cccccccccCccc---eeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccccccC--CCceEEEEEeCCCCe
Confidence 0 00111111111 112223455667789999999999999998 8999999976544322 345668999999999
Q ss_pred EEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCC---cEEEEecCCCcEEEEecCcccccccccc
Q psy10063 814 EVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDG---KSYASGGEDGFVRLHTFDQAYFDYTFDI 885 (894)
Q Consensus 814 l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg---~~LaS~s~Dg~V~vWdl~~~~~~~~~~~ 885 (894)
++++..++ .|++|+ .+.+|...|.+++|+||| ++|++++.|+.|+|||++.++.+..+..
T Consensus 407 la~~~~~g----~v~l~~--------~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~ 469 (814)
T 3mkq_A 407 YALIDETG----QIKYYK--------NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDV 469 (814)
T ss_dssp EEEECTTC----CEEEEE--------TTEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESS
T ss_pred EEEEeCCC----cEEEEE--------CCCCccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEec
Confidence 99998877 599995 356788899999999999 6899999999999999998887776654
No 26
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-37 Score=346.27 Aligned_cols=308 Identities=15% Similarity=0.165 Sum_probs=263.7
Q ss_pred EEEecCCCCEEEEEEccCCC-EEEEecCCCcEEEEec----CCCe------EEEEecC----------CCCCCeeEEEEc
Q psy10063 403 MQVTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDL----RMGR------ELESISG----------HAKEPINDMQFS 461 (894)
Q Consensus 403 ~~l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~----~tg~------~~~~l~~----------h~~~~V~~v~~s 461 (894)
+....|.+.|.+++|+|+|+ +|++|+.||.|+|||+ ..++ ....+.. |.. .|.+++|+
T Consensus 39 ~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s 117 (425)
T 1r5m_A 39 LKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTN-QVTCLAWS 117 (425)
T ss_dssp CEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CB-CEEEEEEC
T ss_pred eeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCC-ceEEEEEc
Confidence 34556779999999999999 9999999999999999 8888 4555554 555 89999999
Q ss_pred CCCCEEEEEeCCCCc-----------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CC----
Q psy10063 462 KDATMFITASHSQAV-----------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE-RP---- 519 (894)
Q Consensus 462 pdg~~la~~~~d~~i-----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~---- 519 (894)
|++++|++++.++.+ ..|.+++|+|++++|++++.||.|++||++.++.+..+... ..
T Consensus 118 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 118 HDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp TTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 999999999999876 58999999999999999999999999999999999888754 33
Q ss_pred -----------eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEE
Q psy10063 520 -----------VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY 588 (894)
Q Consensus 520 -----------v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l 588 (894)
+.+++|++++ .|++++.++. |++||+..++.+..+.+|...|.+++|++++++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~--------------i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDD-KFVIPGPKGA--------------IFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp --------CCCBSCCEEEETT-EEEEECGGGC--------------EEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred eeccccCCcceeeEEEEcCCC-EEEEEcCCCe--------------EEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence 8999999985 5777877776 8999999999999999999999999999999999
Q ss_pred EEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhH
Q psy10063 589 ASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQI 668 (894)
Q Consensus 589 ~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~ 668 (894)
++++.||.|++||++.++.+
T Consensus 263 ~~~~~d~~i~i~d~~~~~~~------------------------------------------------------------ 282 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNGNSQ------------------------------------------------------------ 282 (425)
T ss_dssp EEEETTSCEEEECSSSBSCS------------------------------------------------------------
T ss_pred EEEcCCCEEEEEECCCCccc------------------------------------------------------------
Confidence 99999999999998543210
Q ss_pred HHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCccccc
Q psy10063 669 EMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKL 748 (894)
Q Consensus 669 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~ 748 (894)
T Consensus 283 -------------------------------------------------------------------------------- 282 (425)
T 1r5m_A 283 -------------------------------------------------------------------------------- 282 (425)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc---cCCCceEeecCCCeEEEEecCCCCce
Q psy10063 749 DGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL---LSCPDFLFDFDTTREVTTTSTKVGKF 825 (894)
Q Consensus 749 dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~---~~~~~~~fS~dg~~l~~as~d~~g~~ 825 (894)
..+.+|...|.+++|+|++ +|++++.|+.|++||+..++.+..+. ..+..++|+++++++++++.++
T Consensus 283 -----~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---- 352 (425)
T 1r5m_A 283 -----NCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDG---- 352 (425)
T ss_dssp -----EEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTS----
T ss_pred -----eEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCC----
Confidence 1123466678899999999 99999999999999999888765543 3455778999999999999887
Q ss_pred eEEEeecCCcc--------------------eeeeccCCCC--CeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063 826 DARFYHLIFEE--------------------EFARIKGHFG--PINSLAFHPDGKSYASGGEDGFVRLHTFDQ 876 (894)
Q Consensus 826 ~I~vwd~~tg~--------------------~l~~l~gH~~--~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~ 876 (894)
.|+|||+..++ ++..+.+|.. .|.+|+|+|++++|++++.||.|+||++++
T Consensus 353 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 353 QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp CEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence 59999999988 8899999977 999999999999999999999999999963
No 27
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-36 Score=331.52 Aligned_cols=288 Identities=16% Similarity=0.146 Sum_probs=227.0
Q ss_pred eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC--eEEEEe-cC-CCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063 400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG--RELESI-SG-HAKEPINDMQFSKDATMFITASHSQA 475 (894)
Q Consensus 400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg--~~~~~l-~~-h~~~~V~~v~~spdg~~la~~~~d~~ 475 (894)
.+...|.+|.+.|.+++|+++ +|++|+.|+.|+|||+..+ +.+..+ .+ |..
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~----------------------- 59 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKK----------------------- 59 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCS-----------------------
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccC-----------------------
Confidence 345578899999999999987 9999999999999999875 455666 34 766
Q ss_pred ccceEEEEEecCCCEEEEEECCCCEEEEEcCC-------CcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEecc
Q psy10063 476 VEPINDMQFSKDATMFITASKDHTAKLFTTHD-------RQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTS 547 (894)
Q Consensus 476 i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~-------~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~ 547 (894)
.|.+|+|+|++++|++|+.|+.|+|||++. .+++..+. |...|.+++|+|+|++|++++.|+.
T Consensus 60 --~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~------- 130 (330)
T 2hes_X 60 --AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKS------- 130 (330)
T ss_dssp --CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSC-------
T ss_pred --CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCE-------
Confidence 788999999999999999999999999853 34566665 4688999999999999999999997
Q ss_pred CccceeeEEEEeccc----cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCC
Q psy10063 548 TKVGKFDARFYHLIF----EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDG 623 (894)
Q Consensus 548 ~~~~~~~v~vwd~~~----~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg 623 (894)
|++||+.. .+++..+.+|...|.+|+|+|++.+|++|+.|+.|++|++..+..
T Consensus 131 -------v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~---------------- 187 (330)
T 2hes_X 131 -------VWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW---------------- 187 (330)
T ss_dssp -------EEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE----------------
T ss_pred -------EEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe----------------
Confidence 78888842 256778899999999999999999999999999999998642200
Q ss_pred cEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcce
Q psy10063 624 LVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQI 703 (894)
Q Consensus 624 ~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~ 703 (894)
T Consensus 188 -------------------------------------------------------------------------------- 187 (330)
T 2hes_X 188 -------------------------------------------------------------------------------- 187 (330)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC--CCEEEEecCC
Q psy10063 704 EMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK--REKLALALAD 781 (894)
Q Consensus 704 ~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd--g~~Latgs~D 781 (894)
..+..+.+|.+.|.+++|+|+ +.+|++++.|
T Consensus 188 -----------------------------------------------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 188 -----------------------------------------------ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD 220 (330)
T ss_dssp -----------------------------------------------EEEEEECCCSSCEEEEEECCSSSSCEEEEEETT
T ss_pred -----------------------------------------------eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC
Confidence 000134568888999999999 7789999999
Q ss_pred CcEEEEEccCCc--------eeec----cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc--eee-eccCCCC
Q psy10063 782 KVSERYRDRKNK--------ATAG----FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE--EFA-RIKGHFG 846 (894)
Q Consensus 782 g~I~iwd~~~~~--------~~~~----~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~--~l~-~l~gH~~ 846 (894)
+.|+||++.... .+.. +...+..++|++++ ++++++.|+ .|+|||+..++ ++. .+.+|..
T Consensus 221 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg----~v~iw~~~~~~~~~~~~~~~~h~~ 295 (330)
T 2hes_X 221 STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADG----VLAVYEEVDGEWKVFAKRALCHGV 295 (330)
T ss_dssp SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTS----CEEEEEEETTEEEEEEEESCTTTT
T ss_pred CeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCC----EEEEEEcCCCceEEEecccccccc
Confidence 999999986541 2221 23345567788554 788888887 59999998773 333 3468887
Q ss_pred -CeeEEEEee--CCcEEEEecCCCcEEEEecCc
Q psy10063 847 -PINSLAFHP--DGKSYASGGEDGFVRLHTFDQ 876 (894)
Q Consensus 847 -~V~~l~fSp--dg~~LaS~s~Dg~V~vWdl~~ 876 (894)
.|.+|+|+| ++++||+||.||.|+||+++.
T Consensus 296 ~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 296 YEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp SCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 899999999 789999999999999999875
No 28
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-35 Score=325.85 Aligned_cols=303 Identities=14% Similarity=0.137 Sum_probs=252.6
Q ss_pred ceeeeeccCccEEEecCC-----------CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE---EEE
Q psy10063 381 DRLNSMSPAARKLATNAE-----------PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE---LES 446 (894)
Q Consensus 381 ~~~~~~s~dg~~l~~~~~-----------~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~---~~~ 446 (894)
....+|+|||++++.... ....+...+|.+.|.+++|+|++++|++++ ||.|+|||+..++. +..
T Consensus 12 v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~ 90 (337)
T 1gxr_A 12 AYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQ 90 (337)
T ss_dssp CCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEE
T ss_pred eeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeec
Confidence 455689999999876532 123345568999999999999999999999 99999999987653 233
Q ss_pred ec--CCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCee
Q psy10063 447 IS--GHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVN 521 (894)
Q Consensus 447 l~--~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~ 521 (894)
+. +|.. .|.+++|+|++++|++++.||.|++||++.++ ....+. +...|.
T Consensus 91 ~~~~~~~~-------------------------~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~ 145 (337)
T 1gxr_A 91 LDCLNRDN-------------------------YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY 145 (337)
T ss_dssp EECSCTTS-------------------------BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE
T ss_pred ccccCCCC-------------------------cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE
Confidence 32 4544 78999999999999999999999999999887 444454 457899
Q ss_pred EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10063 522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNT 601 (894)
Q Consensus 522 ~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwd 601 (894)
+++|+|++++|++++.++. |++||++.++.+..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 146 ~~~~~~~~~~l~~~~~dg~--------------v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d 211 (337)
T 1gxr_A 146 ALAISPDSKVCFSCCSDGN--------------IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD 211 (337)
T ss_dssp EEEECTTSSEEEEEETTSC--------------EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCc--------------EEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEE
Confidence 9999999999999999987 89999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCC
Q psy10063 602 LSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSG 681 (894)
Q Consensus 602 l~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g 681 (894)
++.++.+.
T Consensus 212 ~~~~~~~~------------------------------------------------------------------------ 219 (337)
T 1gxr_A 212 LREGRQLQ------------------------------------------------------------------------ 219 (337)
T ss_dssp TTTTEEEE------------------------------------------------------------------------
T ss_pred CCCCceEe------------------------------------------------------------------------
Confidence 86542110
Q ss_pred CeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCC
Q psy10063 682 TRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVD 761 (894)
Q Consensus 682 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~ 761 (894)
...+..
T Consensus 220 --------------------------------------------------------------------------~~~~~~ 225 (337)
T 1gxr_A 220 --------------------------------------------------------------------------QHDFTS 225 (337)
T ss_dssp --------------------------------------------------------------------------EEECSS
T ss_pred --------------------------------------------------------------------------eecCCC
Confidence 001233
Q ss_pred ceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee--ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee
Q psy10063 762 IGFKMPEPPKREKLALALADKVSERYRDRKNKATA--GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA 839 (894)
Q Consensus 762 ~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~--~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~ 839 (894)
.+.+++|+|++++|++++.|+.|++|++...+... .+...+..++|+++++++++++.++ .|++||+..++.+.
T Consensus 226 ~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN----LLNAWRTPYGASIF 301 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTCCEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCC----cEEEEECCCCeEEE
Confidence 57789999999999999999999999998877643 3334456788999999999999887 69999999998874
Q ss_pred eccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063 840 RIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTF 874 (894)
Q Consensus 840 ~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl 874 (894)
. ..|...|.+++|+|++++|++++.||.|+||++
T Consensus 302 ~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 302 Q-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp E-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred E-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 4 468899999999999999999999999999997
No 29
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.9e-35 Score=323.51 Aligned_cols=290 Identities=16% Similarity=0.162 Sum_probs=240.6
Q ss_pred eEEEEEecCCCCEEEEEEccC-CCEEEEecCCCcEEEEecCCCe-----EEEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063 400 VVKMQVTDQSAKITSLLWGNL-DQYIITGHAKGDICTWDLRMGR-----ELESISGHAKEPINDMQFSKDATMFITASHS 473 (894)
Q Consensus 400 ~~~~~l~~H~~~V~~l~~spd-g~~L~sgs~Dg~I~iWd~~tg~-----~~~~l~~h~~~~V~~v~~spdg~~la~~~~d 473 (894)
.++..|+||.+.|.+|+|+|+ +++||+|+.||.|+|||+..++ +++.+.+|..
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~--------------------- 87 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH--------------------- 87 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSS---------------------
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCC---------------------
Confidence 455679999999999999997 6899999999999999987643 5677888887
Q ss_pred CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063 474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK 552 (894)
Q Consensus 474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~ 552 (894)
.|.+++|+|+|++|++++.|+.|++|+...+........ ...+..+.+++++.+|++++.++.
T Consensus 88 ----~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~------------ 151 (340)
T 4aow_A 88 ----FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT------------ 151 (340)
T ss_dssp ----CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSC------------
T ss_pred ----CEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCe------------
Confidence 788899999999999999999999999999888877765 578899999999999999999997
Q ss_pred eeEEEEeccccce-EEEccCCCCCeEEEEEecCC--CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEec
Q psy10063 553 FDARFYHLIFEEE-FARIKGHFGPINSLAFHPDG--KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ 629 (894)
Q Consensus 553 ~~v~vwd~~~~~~-~~~l~~h~~~V~~l~~spdg--~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~ 629 (894)
+++||+..... ...+.+|...|.+++|++++ .++++++.|+.|++||++.++.+
T Consensus 152 --~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~--------------------- 208 (340)
T 4aow_A 152 --IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK--------------------- 208 (340)
T ss_dssp --EEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE---------------------
T ss_pred --EEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee---------------------
Confidence 78888765544 34467899999999999865 57889999999999998653210
Q ss_pred CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeee
Q psy10063 630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNR 709 (894)
Q Consensus 630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 709 (894)
T Consensus 209 -------------------------------------------------------------------------------- 208 (340)
T 4aow_A 209 -------------------------------------------------------------------------------- 208 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEc
Q psy10063 710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRD 789 (894)
Q Consensus 710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~ 789 (894)
..+.+|.+.|.+|+|+|++++|++|+.|+.|+|||+
T Consensus 209 --------------------------------------------~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 209 --------------------------------------------TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 244 (340)
T ss_dssp --------------------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred --------------------------------------------eEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEe
Confidence 012346778999999999999999999999999999
Q ss_pred cCCceeeccccC--CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec---------cCCCCCeeEEEEeeCCc
Q psy10063 790 RKNKATAGFLLS--CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI---------KGHFGPINSLAFHPDGK 858 (894)
Q Consensus 790 ~~~~~~~~~~~~--~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l---------~gH~~~V~~l~fSpdg~ 858 (894)
...+.+..+... +..++|++++..++ ++.++ .|+|||++.+.++..+ .+|...|.+|+|+|||+
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~ 319 (340)
T 4aow_A 245 NEGKHLYTLDGGDIINALCFSPNRYWLC-AATGP----SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ 319 (340)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSSSEEE-EEETT----EEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS
T ss_pred ccCceeeeecCCceEEeeecCCCCceee-ccCCC----EEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC
Confidence 998886655433 44667888876555 44454 5999999988766554 36899999999999999
Q ss_pred EEEEecCCCcEEEEecCccc
Q psy10063 859 SYASGGEDGFVRLHTFDQAY 878 (894)
Q Consensus 859 ~LaS~s~Dg~V~vWdl~~~~ 878 (894)
+||+|+.||.|+||+++.|.
T Consensus 320 ~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 320 TLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEETTSCEEEEEEEC--
T ss_pred EEEEEeCCCEEEEEeCCCcC
Confidence 99999999999999998875
No 30
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5e-35 Score=355.63 Aligned_cols=288 Identities=18% Similarity=0.205 Sum_probs=240.4
Q ss_pred eEEEEEecCCCCEEEEEEccCC-CEEEEecCCCcEEEEecCC-----CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063 400 VVKMQVTDQSAKITSLLWGNLD-QYIITGHAKGDICTWDLRM-----GRELESISGHAKEPINDMQFSKDATMFITASHS 473 (894)
Q Consensus 400 ~~~~~l~~H~~~V~~l~~spdg-~~L~sgs~Dg~I~iWd~~t-----g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d 473 (894)
.++..+.+|.+.|.+|+|++++ ++|++|+.|+.|+|||+.. +...+.+.+|..
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~--------------------- 431 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSH--------------------- 431 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSS---------------------
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCC---------------------
Confidence 4455789999999999999875 6999999999999999875 345677888887
Q ss_pred CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063 474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK 552 (894)
Q Consensus 474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~ 552 (894)
.|.+++|+|+|++|++|+.||.|+|||+..+++++.+. |...|.+++|+|++++|++++.|+.
T Consensus 432 ----~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~------------ 495 (694)
T 3dm0_A 432 ----FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRT------------ 495 (694)
T ss_dssp ----CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSC------------
T ss_pred ----cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCE------------
Confidence 78889999999999999999999999999999988887 4688999999999999999999998
Q ss_pred eeEEEEeccccceEEEc---cCCCCCeEEEEEecCC--CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEE
Q psy10063 553 FDARFYHLIFEEEFARI---KGHFGPINSLAFHPDG--KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYP 627 (894)
Q Consensus 553 ~~v~vwd~~~~~~~~~l---~~h~~~V~~l~~spdg--~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~ 627 (894)
|++||+......... .+|...|.+++|+|++ .+|++|+.||.|+|||++..+.+
T Consensus 496 --i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~------------------- 554 (694)
T 3dm0_A 496 --IKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR------------------- 554 (694)
T ss_dssp --EEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEE-------------------
T ss_pred --EEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEE-------------------
Confidence 778887644333322 4788999999999987 58999999999999998543200
Q ss_pred ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063 628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR 707 (894)
Q Consensus 628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~ 707 (894)
T Consensus 555 -------------------------------------------------------------------------------- 554 (694)
T 3dm0_A 555 -------------------------------------------------------------------------------- 554 (694)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEE
Q psy10063 708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERY 787 (894)
Q Consensus 708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iw 787 (894)
..+.+|.+.|.+++|+|++++|++++.|+.|+||
T Consensus 555 ----------------------------------------------~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iw 588 (694)
T 3dm0_A 555 ----------------------------------------------STLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 588 (694)
T ss_dssp ----------------------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSBCEEE
T ss_pred ----------------------------------------------EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 1234577889999999999999999999999999
Q ss_pred EccCCceeecccc--CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCC-------------------C
Q psy10063 788 RDRKNKATAGFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF-------------------G 846 (894)
Q Consensus 788 d~~~~~~~~~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~-------------------~ 846 (894)
|+..++.+..+.. .+..++|++++.+++++... .|+|||++.++++..+..|. .
T Consensus 589 d~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (694)
T 3dm0_A 589 DLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEH-----GIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVI 663 (694)
T ss_dssp ETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETT-----EEEEEETTTTEEEEEECCCCC----------------CCC
T ss_pred ECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCC-----CEEEEECCCCCChhhhccccccccccccccccccCCceeE
Confidence 9999888765543 34467899999888776654 49999999998887765432 1
Q ss_pred CeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063 847 PINSLAFHPDGKSYASGGEDGFVRLHTFDQ 876 (894)
Q Consensus 847 ~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~ 876 (894)
.|.+|+|+|||++|++|+.||.|+||++..
T Consensus 664 ~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 664 YCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 378899999999999999999999999863
No 31
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.4e-35 Score=328.25 Aligned_cols=290 Identities=16% Similarity=0.141 Sum_probs=234.0
Q ss_pred CeEEEEEecCCCCEEEEEEccCC-CEEEEecCCCcEEEEecCCCeEEEEec--CCCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063 399 PVVKMQVTDQSAKITSLLWGNLD-QYIITGHAKGDICTWDLRMGRELESIS--GHAKEPINDMQFSKDATMFITASHSQA 475 (894)
Q Consensus 399 ~~~~~~l~~H~~~V~~l~~spdg-~~L~sgs~Dg~I~iWd~~tg~~~~~l~--~h~~~~V~~v~~spdg~~la~~~~d~~ 475 (894)
..+...+.+|.+.|.+++|+|++ ++|++|+.||.|+|||+..++....+. +|..
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~----------------------- 119 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGD----------------------- 119 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTC-----------------------
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCC-----------------------
Confidence 34556788999999999999999 899999999999999999888777765 5776
Q ss_pred ccceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEe-C---CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc
Q psy10063 476 VEPINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYT-T---ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKV 550 (894)
Q Consensus 476 i~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~---~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~ 550 (894)
.|.+++|+| ++.+|++++.|+.|+|||++. +.+..+. + ...|.+++|+|++++|++++.++.
T Consensus 120 --~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---------- 186 (383)
T 3ei3_B 120 --AITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGR---------- 186 (383)
T ss_dssp --BEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSE----------
T ss_pred --ceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCC----------
Confidence 788889998 789999999999999999996 4444444 3 267999999999999999999986
Q ss_pred ceeeEEEEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEec
Q psy10063 551 GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ 629 (894)
Q Consensus 551 ~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~ 629 (894)
|++||+ .++.+..+.+|...|.+++|+|+++ +|++++.|+.|++||++..+...
T Consensus 187 ----i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-------------------- 241 (383)
T 3ei3_B 187 ----LLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN-------------------- 241 (383)
T ss_dssp ----EEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT--------------------
T ss_pred ----EEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc--------------------
Confidence 889998 5788888999999999999999999 99999999999999986432100
Q ss_pred CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeee
Q psy10063 630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNR 709 (894)
Q Consensus 630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 709 (894)
T Consensus 242 -------------------------------------------------------------------------------- 241 (383)
T 3ei3_B 242 -------------------------------------------------------------------------------- 241 (383)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC-CCCEEEEecCCCcEEEEE
Q psy10063 710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP-KREKLALALADKVSERYR 788 (894)
Q Consensus 710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp-dg~~Latgs~Dg~I~iwd 788 (894)
.....+ +|...|.+++|+| ++.+|++++.|+.|+|||
T Consensus 242 -----------------------------------------~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd 279 (383)
T 3ei3_B 242 -----------------------------------------SYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYS 279 (383)
T ss_dssp -----------------------------------------CEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEE
T ss_pred -----------------------------------------ceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEE
Confidence 000011 3667789999999 999999999999999999
Q ss_pred ccCCceeeccccC---------CCceEeecCCCeEEEE---------ecCCCCceeEEEeecCCcceeeeccC--CCCCe
Q psy10063 789 DRKNKATAGFLLS---------CPDFLFDFDTTREVTT---------TSTKVGKFDARFYHLIFEEEFARIKG--HFGPI 848 (894)
Q Consensus 789 ~~~~~~~~~~~~~---------~~~~~fS~dg~~l~~a---------s~d~~g~~~I~vwd~~tg~~l~~l~g--H~~~V 848 (894)
++.++.+..+... .-...|++++..++++ +.++ .|+|||+.+++++..+.+ |.+.|
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~----~i~iwd~~~~~~~~~l~~~~~~~~~ 355 (383)
T 3ei3_B 280 SYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKR----TIDIYDANSGGLVHQLRDPNAAGII 355 (383)
T ss_dssp TTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCC----CEEEEETTTCCEEEEECBTTBCSCC
T ss_pred CCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCC----eEEEEecCCCceeeeecCCCCCceE
Confidence 9887664332210 1112344444444333 3343 699999999999999987 56778
Q ss_pred eEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063 849 NSLAFHPDGKSYASGGEDGFVRLHTFDQ 876 (894)
Q Consensus 849 ~~l~fSpdg~~LaS~s~Dg~V~vWdl~~ 876 (894)
.+|+|+|||++|++|+ ||.|+||++++
T Consensus 356 ~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 356 SLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred EEEEEecCccEEEEec-CCcEEEEecCC
Confidence 8889999999999997 99999999974
No 32
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.6e-35 Score=334.69 Aligned_cols=293 Identities=15% Similarity=0.107 Sum_probs=231.8
Q ss_pred EEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063 404 QVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGRE--LESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN 480 (894)
Q Consensus 404 ~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~ 480 (894)
...+|...|+||+|+| ++.+||+|+.||.|+|||+..++. +..+.+|.+ .|.
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~-------------------------~V~ 168 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGG-------------------------SIT 168 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSC-------------------------CCC
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCC-------------------------CEE
Confidence 4568999999999999 567999999999999999987754 444567877 788
Q ss_pred EEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeC---CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063 481 DMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTT---ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR 556 (894)
Q Consensus 481 ~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~---~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~ 556 (894)
+|+|+| ++.+|++|+.||.|+|||++.+.+.....+ ...+.+++|++++.+|++++.++. |+
T Consensus 169 ~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~--------------i~ 234 (435)
T 4e54_B 169 GLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGN--------------VI 234 (435)
T ss_dssp EEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSB--------------EE
T ss_pred EEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCc--------------Ee
Confidence 888887 788999999999999999987665544443 245789999999999999999997 88
Q ss_pred EEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063 557 FYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS 635 (894)
Q Consensus 557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~ 635 (894)
+||+. ++.+..+.+|...|.+|+|+|++. +|++|+.|+.|+|||++..+...
T Consensus 235 ~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~-------------------------- 287 (435)
T 4e54_B 235 LLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA-------------------------- 287 (435)
T ss_dssp EEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS--------------------------
T ss_pred eeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc--------------------------
Confidence 89986 566778899999999999999876 78899999999999986542110
Q ss_pred EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063 636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS 715 (894)
Q Consensus 636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~ 715 (894)
T Consensus 288 -------------------------------------------------------------------------------- 287 (435)
T 4e54_B 288 -------------------------------------------------------------------------------- 287 (435)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063 716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT 795 (894)
Q Consensus 716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~ 795 (894)
......+|...|.+++|+|++.+|++++.|+.|+|||+..++..
T Consensus 288 ------------------------------------~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 288 ------------------------------------SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp ------------------------------------CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE
T ss_pred ------------------------------------eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc
Confidence 00012357788999999999999999999999999999887764
Q ss_pred ecccc---------CCCceEeecCCCeEEEEecCCC--------CceeEEEeecCCcceeeecc-CCCCCeeEE-EEeeC
Q psy10063 796 AGFLL---------SCPDFLFDFDTTREVTTTSTKV--------GKFDARFYHLIFEEEFARIK-GHFGPINSL-AFHPD 856 (894)
Q Consensus 796 ~~~~~---------~~~~~~fS~dg~~l~~as~d~~--------g~~~I~vwd~~tg~~l~~l~-gH~~~V~~l-~fSpd 856 (894)
..+.. ..-..+|++++..++++..... ....|+|||+.+|+++..+. +|...|.++ +|+||
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspd 411 (435)
T 4e54_B 332 LGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPM 411 (435)
T ss_dssp EEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTT
T ss_pred eEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCC
Confidence 43321 1224567888887777654311 11149999999999998865 788899988 69999
Q ss_pred CcEEEEecCCCcEEEEecCcccc
Q psy10063 857 GKSYASGGEDGFVRLHTFDQAYF 879 (894)
Q Consensus 857 g~~LaS~s~Dg~V~vWdl~~~~~ 879 (894)
|++||+|+ |+.|+||+++.++.
T Consensus 412 g~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 412 GDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp SSCEEEEC-SSEEEECCCC----
T ss_pred CCEEEEEc-CCcEEEEECCcCee
Confidence 99999886 78999999998764
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3e-35 Score=326.51 Aligned_cols=316 Identities=12% Similarity=0.070 Sum_probs=243.9
Q ss_pred EEEecCCCCEEEEEEccC----CCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063 403 MQVTDQSAKITSLLWGNL----DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP 478 (894)
Q Consensus 403 ~~l~~H~~~V~~l~~spd----g~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~ 478 (894)
..+.+|.+.|.+|+|+|+ ..+|++++.++.|+|||+..++.++.+..|.. . .....
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~-~-------------------~~~~~ 71 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVD-A-------------------DADEN 71 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEEC-S-------------------CTTCC
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccc-c-------------------CCCCc
Confidence 455689999999999984 34666666677999999998887777665432 0 00016
Q ss_pred eEEEEEecC----CCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccce
Q psy10063 479 INDMQFSKD----ATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGK 552 (894)
Q Consensus 479 V~~l~~spd----g~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~ 552 (894)
|.+++|+|+ |.+|++|+.||.|+|||+.+++++..+. |...|.+++|+| ++.+|++++.++.
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~------------ 139 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHA------------ 139 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSC------------
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCe------------
Confidence 788888887 6799999999999999999999999888 578999999999 9999999999997
Q ss_pred eeEEEEeccccceEEEc---cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEec
Q psy10063 553 FDARFYHLIFEEEFARI---KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ 629 (894)
Q Consensus 553 ~~v~vwd~~~~~~~~~l---~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~ 629 (894)
|++||+..++.+..+ .+|...|.+++|+|++++|++++.||.|++||++.++.+.... ..+.++|++..+
T Consensus 140 --i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~--- 212 (366)
T 3k26_A 140 --LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIK--ESYDYNPNKTNR--- 212 (366)
T ss_dssp --EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHH--HHHTCCGGGCSS---
T ss_pred --EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccc--eeEEecCCCCcc---
Confidence 899999999988887 7899999999999999999999999999999997654321000 000111111000
Q ss_pred CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeee
Q psy10063 630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNR 709 (894)
Q Consensus 630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 709 (894)
T Consensus 213 -------------------------------------------------------------------------------- 212 (366)
T 3k26_A 213 -------------------------------------------------------------------------------- 212 (366)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEc
Q psy10063 710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRD 789 (894)
Q Consensus 710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~ 789 (894)
.+. .. ...........+|...|.+++|+ +.+|++++.|+.|++||+
T Consensus 213 ----------~~~-----------~~-----------~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~ 258 (366)
T 3k26_A 213 ----------PFI-----------SQ-----------KIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKP 258 (366)
T ss_dssp ----------CCC-----------CE-----------EECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEE
T ss_pred ----------ccc-----------ce-----------eeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeC
Confidence 000 00 00001112344588889999998 789999999999999998
Q ss_pred cCCce--------------ee---ccccCCCceEeecC--CCeEEEEecCCCCceeEEEeecCCccee----eeccCC--
Q psy10063 790 RKNKA--------------TA---GFLLSCPDFLFDFD--TTREVTTTSTKVGKFDARFYHLIFEEEF----ARIKGH-- 844 (894)
Q Consensus 790 ~~~~~--------------~~---~~~~~~~~~~fS~d--g~~l~~as~d~~g~~~I~vwd~~tg~~l----~~l~gH-- 844 (894)
...+. +. .+...+..++|+++ +++|++++.++ .|+|||+..++++ ..+.+|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~ 334 (366)
T 3k26_A 259 GKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG----KLYVWDLEVEDPHKAKCTTLTHHKC 334 (366)
T ss_dssp SSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTS----CEEEEECCSSSGGGCEEEEECCTTC
T ss_pred CCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCC----cEEEEECCCCCCccccceEEccccc
Confidence 77643 21 22334667889999 99999998887 5999999988644 477787
Q ss_pred CCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063 845 FGPINSLAFHPDGKSYASGGEDGFVRLHTFD 875 (894)
Q Consensus 845 ~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~ 875 (894)
...|.+|+|+|++++|++++.||.|+|||+.
T Consensus 335 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 335 GAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 7999999999999999999999999999985
No 34
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.6e-34 Score=320.16 Aligned_cols=304 Identities=12% Similarity=0.063 Sum_probs=243.0
Q ss_pred EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe--EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063 405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR--ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM 482 (894)
Q Consensus 405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~--~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l 482 (894)
+..|.+.|.+++|+|++++|++|+.|+.|+|||+..++ .+..+.+|.. .|.++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~-------------------------~v~~~ 58 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG-------------------------QVTGV 58 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSS-------------------------CEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCC-------------------------cccEE
Confidence 45699999999999999999999999999999999998 8888998987 78899
Q ss_pred EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe---CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063 483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
+|+|++++|++++.||.|+|||++.+++...+. +...|.+++|+|++++|++++.++. |++||
T Consensus 59 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------v~i~d 124 (372)
T 1k8k_C 59 DWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV--------------ISICY 124 (372)
T ss_dssp EEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSS--------------EEEEE
T ss_pred EEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCE--------------EEEEE
Confidence 999999999999999999999999988665543 5678999999999999999999997 77788
Q ss_pred ccccce----EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063 560 LIFEEE----FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS 635 (894)
Q Consensus 560 ~~~~~~----~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~ 635 (894)
+..++. .....+|...|.+++|+|++++|++++.||.|++||++.........
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~----------------------- 181 (372)
T 1k8k_C 125 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA----------------------- 181 (372)
T ss_dssp EETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCC-----------------------
T ss_pred ecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccc-----------------------
Confidence 777652 33346789999999999999999999999999999986432100000
Q ss_pred EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063 636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS 715 (894)
Q Consensus 636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~ 715 (894)
...|
T Consensus 182 ------------------------~~~~---------------------------------------------------- 185 (372)
T 1k8k_C 182 ------------------------PTPW---------------------------------------------------- 185 (372)
T ss_dssp ------------------------CBTT----------------------------------------------------
T ss_pred ------------------------cccc----------------------------------------------------
Confidence 0000
Q ss_pred CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063 716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT 795 (894)
Q Consensus 716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~ 795 (894)
+. ....+.....+.+|...|.+++|+|++.+|++++.|+.|++||++.++.+
T Consensus 186 -----------------------~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 186 -----------------------GS-----KMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp -----------------------BS-----CCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred -----------------------cc-----ccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 00 00011112234467888999999999999999999999999999988876
Q ss_pred ecccc---CCCceEeecCCCeEEEEecCCCCceeEEEeecCC--cce--------------------------------e
Q psy10063 796 AGFLL---SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF--EEE--------------------------------F 838 (894)
Q Consensus 796 ~~~~~---~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t--g~~--------------------------------l 838 (894)
..+.. .+..++|++++.+++++ .++ .|+||++.. ++. .
T Consensus 238 ~~~~~~~~~v~~~~~~~~~~~l~~~-~d~----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (372)
T 1k8k_C 238 ATLASETLPLLAVTFITESSLVAAG-HDC----FPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSE 312 (372)
T ss_dssp EEEECSSCCEEEEEEEETTEEEEEE-TTS----SCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---
T ss_pred EEEccCCCCeEEEEEecCCCEEEEE-eCC----eEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccc
Confidence 65543 34577899999988877 554 599999987 421 0
Q ss_pred ------eec-cCCCCCeeEEEEe-eCC---cEEEEecCCCcEEEEecCcccc
Q psy10063 839 ------ARI-KGHFGPINSLAFH-PDG---KSYASGGEDGFVRLHTFDQAYF 879 (894)
Q Consensus 839 ------~~l-~gH~~~V~~l~fS-pdg---~~LaS~s~Dg~V~vWdl~~~~~ 879 (894)
..+ .+|.+.|.+|+|+ ++| .+|++|+.||.|+||+++.++.
T Consensus 313 ~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 313 GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp ------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred cCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence 333 4999999999976 666 9999999999999999987553
No 35
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-35 Score=334.46 Aligned_cols=284 Identities=12% Similarity=0.079 Sum_probs=238.9
Q ss_pred cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC----CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063 407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM----GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM 482 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t----g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l 482 (894)
.|...|.+++|+|++++|++|+.||.|+|||+.. .+.+..+.+|.. .|.+|
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~-------------------------~v~~~ 119 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSS-------------------------SVKTV 119 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSS-------------------------CCCEE
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCcc-------------------------ceEEE
Confidence 5889999999999999999999999999999987 457888888987 78888
Q ss_pred EEecC-CCEEEEEECCCCEEEEEcCCCc------EEEEE----eCCCCeeEEEEcCC-CCEEEEEECCCCeEEEeccCcc
Q psy10063 483 QFSKD-ATMFITASKDHTAKLFTTHDRQ------LLKTY----TTERPVNSAALSPI-LPHVVLGGGQEAREVTTTSTKV 550 (894)
Q Consensus 483 ~~spd-g~~L~sgs~Dg~V~iwdl~~~~------~~~~~----~~~~~v~~l~~spd-g~~l~~~~~~~~~~v~~~~~~~ 550 (894)
+|+|+ +.+|++++.||.|+|||++.++ ....+ .+...|.+++|+|+ +.+|++++.++.
T Consensus 120 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~---------- 189 (416)
T 2pm9_A 120 KFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNF---------- 189 (416)
T ss_dssp EECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSC----------
T ss_pred EEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCC----------
Confidence 88887 8899999999999999999876 33332 35678999999999 788899888887
Q ss_pred ceeeEEEEeccccceEEEccCC------CCCeEEEEEecCC-CEEEEEeCCC---cEEEEECCCCccccCCCceeeeEEC
Q psy10063 551 GKFDARFYHLIFEEEFARIKGH------FGPINSLAFHPDG-KSYASGGEDG---FLISNTLSNGLDISEGSFTSSSTQQ 620 (894)
Q Consensus 551 ~~~~v~vwd~~~~~~~~~l~~h------~~~V~~l~~spdg-~~l~sgs~Dg---~I~vwdl~~~~~~~~~~~v~~~~~s 620 (894)
|++||++.++.+..+..| ...|.+++|+|++ .+|++++.|+ .|++||++.+...
T Consensus 190 ----v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~------------ 253 (416)
T 2pm9_A 190 ----ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP------------ 253 (416)
T ss_dssp ----EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC------------
T ss_pred ----EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC------------
Confidence 899999999988888776 7899999999997 6899999998 9999998653110
Q ss_pred cCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccC
Q psy10063 621 PDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKD 700 (894)
Q Consensus 621 pdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~ 700 (894)
T Consensus 254 -------------------------------------------------------------------------------- 253 (416)
T 2pm9_A 254 -------------------------------------------------------------------------------- 253 (416)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceec-CCCCceEEEeeCC-CCCEEEEe
Q psy10063 701 EQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILA-GPVDIGFKMPEPP-KREKLALA 778 (894)
Q Consensus 701 ~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~-~h~~~v~~la~sp-dg~~Latg 778 (894)
...+. +|...|.+++|+| ++.+|+++
T Consensus 254 ----------------------------------------------------~~~~~~~~~~~v~~~~~s~~~~~~l~s~ 281 (416)
T 2pm9_A 254 ----------------------------------------------------LQTLNQGHQKGILSLDWCHQDEHLLLSS 281 (416)
T ss_dssp ----------------------------------------------------SBCCCSCCSSCEEEEEECSSCSSCEEEE
T ss_pred ----------------------------------------------------cEEeecCccCceeEEEeCCCCCCeEEEE
Confidence 00122 5677899999999 89999999
Q ss_pred cCCCcEEEEEccCCceeecc---ccCCCceEeecCC-CeEEEEecCCCCceeEEEeecCCcceeeecc------------
Q psy10063 779 LADKVSERYRDRKNKATAGF---LLSCPDFLFDFDT-TREVTTTSTKVGKFDARFYHLIFEEEFARIK------------ 842 (894)
Q Consensus 779 s~Dg~I~iwd~~~~~~~~~~---~~~~~~~~fS~dg-~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~------------ 842 (894)
+.|+.|++||++.++.+..+ ...+..++|++++ .++++++.++ .|+|||+..++......
T Consensus 282 ~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 357 (416)
T 2pm9_A 282 GRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDN----KIEVQTLQNLTNTLDEQETETKQQESETD 357 (416)
T ss_dssp ESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSS----EEEEEESCCCCCSSCC-------------
T ss_pred eCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCC----cEEEEEccCCCCCcccccccccccCCccc
Confidence 99999999999988876544 4456788999999 7888888877 69999998776443221
Q ss_pred -----------------------CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063 843 -----------------------GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQA 877 (894)
Q Consensus 843 -----------------------gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~ 877 (894)
.|..+|.+++|+|||++|++++.||.|+||++..+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 358 FWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp ---------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred ccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 27788899999999999999999999999999864
No 36
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.9e-35 Score=327.44 Aligned_cols=290 Identities=12% Similarity=0.085 Sum_probs=242.6
Q ss_pred EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe------EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063 401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR------ELESISGHAKEPINDMQFSKDATMFITASHSQ 474 (894)
Q Consensus 401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~------~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~ 474 (894)
....+.+|.+.|.+|+|+| ++|++|+.||.|+|||+..++ .+..+.+|..
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~---------------------- 63 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKS---------------------- 63 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTT----------------------
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCC----------------------
Confidence 4457789999999999998 899999999999999999988 7888888887
Q ss_pred CccceEEEEEecC----C---CEEEEEECCCCEEEEEcCCCcE-----EEEEeCC------CCeeEEEEc----CCCCE-
Q psy10063 475 AVEPINDMQFSKD----A---TMFITASKDHTAKLFTTHDRQL-----LKTYTTE------RPVNSAALS----PILPH- 531 (894)
Q Consensus 475 ~i~~V~~l~~spd----g---~~L~sgs~Dg~V~iwdl~~~~~-----~~~~~~~------~~v~~l~~s----pdg~~- 531 (894)
.|.+++|+|+ + ++|++++.||.|+|||+..++. +..+..+ ..|.+++|+ |++++
T Consensus 64 ---~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 140 (397)
T 1sq9_A 64 ---GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHR 140 (397)
T ss_dssp ---CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEE
T ss_pred ---cEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceE
Confidence 7888888888 8 9999999999999999998886 7777644 889999999 99999
Q ss_pred EEEEECCCCeEEEeccCccceeeEEEEeccc------cceEE-----Ec-------cCCCCCeEEEEEecCCCEEEEEeC
Q psy10063 532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIF------EEEFA-----RI-------KGHFGPINSLAFHPDGKSYASGGE 593 (894)
Q Consensus 532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~------~~~~~-----~l-------~~h~~~V~~l~~spdg~~l~sgs~ 593 (894)
|++++.++. |++||+.. ++.+. .+ ..|...|.+++|+|++ +|++++.
T Consensus 141 l~~~~~dg~--------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~ 205 (397)
T 1sq9_A 141 LVATDVKGT--------------TYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN 205 (397)
T ss_dssp EEEEETTSC--------------EEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT
T ss_pred EEEEeCCCc--------------EEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC
Confidence 999999987 77888877 65555 66 4488999999999999 9999999
Q ss_pred CCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhh
Q psy10063 594 DGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARN 673 (894)
Q Consensus 594 Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~ 673 (894)
||.|++||++.++.+. .+.
T Consensus 206 dg~i~i~d~~~~~~~~-------------------------~~~------------------------------------ 224 (397)
T 1sq9_A 206 NGTVQISELSTLRPLY-------------------------NFE------------------------------------ 224 (397)
T ss_dssp TSEEEEEETTTTEEEE-------------------------EEE------------------------------------
T ss_pred CCcEEEEECCCCceeE-------------------------EEe------------------------------------
Confidence 9999999986532110 000
Q ss_pred cccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCc
Q psy10063 674 RMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDT 753 (894)
Q Consensus 674 ~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~ 753 (894)
T Consensus 225 -------------------------------------------------------------------------------- 224 (397)
T 1sq9_A 225 -------------------------------------------------------------------------------- 224 (397)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceecCC---CCceEEEeeCCCCCEEEEecCC---CcEEEEEccCCceeeccc----------------cCCCceEeecCC
Q psy10063 754 PILAGP---VDIGFKMPEPPKREKLALALAD---KVSERYRDRKNKATAGFL----------------LSCPDFLFDFDT 811 (894)
Q Consensus 754 ~~~~~h---~~~v~~la~spdg~~Latgs~D---g~I~iwd~~~~~~~~~~~----------------~~~~~~~fS~dg 811 (894)
...+| ...|.+++|+|++.+|++++.| +.|++||++.++.+..+. ..+..++|++++
T Consensus 225 -~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 225 -SQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp -CCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred -ccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCC
Confidence 00124 5678899999999999999999 999999999888765443 334577899999
Q ss_pred CeEEEEecCCCCceeEEEeecCCcceeeecc------CC---------------CCCeeEEEEeeCC----------cEE
Q psy10063 812 TREVTTTSTKVGKFDARFYHLIFEEEFARIK------GH---------------FGPINSLAFHPDG----------KSY 860 (894)
Q Consensus 812 ~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~------gH---------------~~~V~~l~fSpdg----------~~L 860 (894)
++|++++.++ .|+|||+..++++..+. +| ...|.+|+|+|+| ++|
T Consensus 304 ~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l 379 (397)
T 1sq9_A 304 ETLCSAGWDG----KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESL 379 (397)
T ss_dssp SEEEEEETTS----EEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEE
T ss_pred CEEEEEeCCC----eEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceE
Confidence 9999999887 69999999999999999 88 9999999999999 799
Q ss_pred EEecCCCcEEEEecCccc
Q psy10063 861 ASGGEDGFVRLHTFDQAY 878 (894)
Q Consensus 861 aS~s~Dg~V~vWdl~~~~ 878 (894)
++++.||.|+||+++.++
T Consensus 380 ~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 380 CCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEEETTTEEEEEEEEC--
T ss_pred EEecCCCcEEEEEcCCCC
Confidence 999999999999998763
No 37
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.6e-34 Score=314.14 Aligned_cols=246 Identities=15% Similarity=0.220 Sum_probs=215.5
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR 556 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~ 556 (894)
.|.+|+|+|++++|++++.||.|+|||++++++++.+.. ...|.+++|++++++|++++.++. |+
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~--------------i~ 80 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFR--------------IR 80 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSE--------------EE
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCE--------------EE
Confidence 789999999999999999999999999999999988885 578999999999999999999997 89
Q ss_pred EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063 557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL 636 (894)
Q Consensus 557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~ 636 (894)
+||+..++.+..+.+|.+.|.+|+|+|++++|++|+.||.|++||++.+..+
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~---------------------------- 132 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL---------------------------- 132 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEE----------------------------
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcch----------------------------
Confidence 9999999999999999999999999999999999999999999998532100
Q ss_pred ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063 637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG 716 (894)
Q Consensus 637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g 716 (894)
T Consensus 133 -------------------------------------------------------------------------------- 132 (304)
T 2ynn_A 133 -------------------------------------------------------------------------------- 132 (304)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC-CCCEEEEecCCCcEEEEEccCCcee
Q psy10063 717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP-KREKLALALADKVSERYRDRKNKAT 795 (894)
Q Consensus 717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp-dg~~Latgs~Dg~I~iwd~~~~~~~ 795 (894)
...+.+|...|.+++|+| ++.+|++|+.|+.|++||+......
T Consensus 133 ------------------------------------~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 133 ------------------------------------EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (304)
T ss_dssp ------------------------------------EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS
T ss_pred ------------------------------------hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc
Confidence 012345778899999999 6789999999999999999876654
Q ss_pred ecccc----CCCceEeec--CCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063 796 AGFLL----SCPDFLFDF--DTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFV 869 (894)
Q Consensus 796 ~~~~~----~~~~~~fS~--dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V 869 (894)
..+.. .+..+.|++ ++.++++++.|+ .|+|||++.++++..+.+|...|.+++|+|++++|++|+.||.|
T Consensus 177 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~----~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i 252 (304)
T 2ynn_A 177 FTLTTGQERGVNYVDYYPLPDKPYMITASDDL----TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTL 252 (304)
T ss_dssp EEEECCCTTCEEEEEECCSTTCCEEEEEETTS----EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC----eEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeE
Confidence 43332 233456665 778999999887 69999999999999999999999999999999999999999999
Q ss_pred EEEecCcccccccccc
Q psy10063 870 RLHTFDQAYFDYTFDI 885 (894)
Q Consensus 870 ~vWdl~~~~~~~~~~~ 885 (894)
+|||+..++++..+..
T Consensus 253 ~iWd~~~~~~~~~~~~ 268 (304)
T 2ynn_A 253 KIWNSSTYKVEKTLNV 268 (304)
T ss_dssp EEEETTTCCEEEEECC
T ss_pred EEEECCCCceeeeccC
Confidence 9999999888777754
No 38
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.1e-34 Score=319.91 Aligned_cols=323 Identities=15% Similarity=0.116 Sum_probs=245.6
Q ss_pred EEEEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063 402 KMQVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN 480 (894)
Q Consensus 402 ~~~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~ 480 (894)
...+.+|.+.|.+|+|+| ++++|++|+.||.|+|||+..++....+.... +.. ... ....++...|.
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~---~~~--~~~-------~~~~~~~~~v~ 103 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKA---VCS--IGR-------DHPDVHRYSVE 103 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECE---EEE--ECT-------TCTTCCSSCEE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccc---ccc--ccc-------cccccCCCcEE
Confidence 346778999999999999 99999999999999999999876544332100 000 000 00011112788
Q ss_pred EEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCC---CEEEEEECCCCeEEEeccCccceeeEE
Q psy10063 481 DMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPIL---PHVVLGGGQEAREVTTTSTKVGKFDAR 556 (894)
Q Consensus 481 ~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg---~~l~~~~~~~~~~v~~~~~~~~~~~v~ 556 (894)
+++|+| ++.+|++++.||.|++||++.++++..+.+...+.+++|++.+ .+|++++.++. |+
T Consensus 104 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------v~ 169 (408)
T 4a11_B 104 TVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPK--------------VQ 169 (408)
T ss_dssp EEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSS--------------EE
T ss_pred EEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCe--------------EE
Confidence 999999 7889999999999999999999999999999999999999954 49999999987 89
Q ss_pred EEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063 557 FYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS 635 (894)
Q Consensus 557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~ 635 (894)
+||+..++.+..+.+|...|.+++|+|+++ +|++++.||.|++||++.+... +..
T Consensus 170 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~------------------------~~~ 225 (408)
T 4a11_B 170 LCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGC------------------------LIT 225 (408)
T ss_dssp EEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCC------------------------SEE
T ss_pred EEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcc------------------------ccc
Confidence 999999999999999999999999999998 5899999999999999764311 000
Q ss_pred EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063 636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS 715 (894)
Q Consensus 636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~ 715 (894)
+.... +
T Consensus 226 ~~~~~----------------------------------------~---------------------------------- 231 (408)
T 4a11_B 226 LDQHN----------------------------------------G---------------------------------- 231 (408)
T ss_dssp CCTTT----------------------------------------T----------------------------------
T ss_pred ccccc----------------------------------------c----------------------------------
Confidence 00000 0
Q ss_pred CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063 716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT 795 (894)
Q Consensus 716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~ 795 (894)
...........+|...|.+++|+|++++|++++.|+.|++||+..++..
T Consensus 232 -------------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (408)
T 4a11_B 232 -------------------------------KKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT 280 (408)
T ss_dssp -------------------------------CSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC
T ss_pred -------------------------------ccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc
Confidence 0000111234568889999999999999999999999999999987764
Q ss_pred eccccC--------CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCC
Q psy10063 796 AGFLLS--------CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG 867 (894)
Q Consensus 796 ~~~~~~--------~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg 867 (894)
...... .........+..+++++.++ .|+|||+..++++..+.+|.+.|.+|+|+|++++|++++.||
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 356 (408)
T 4a11_B 281 LVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS----TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDC 356 (408)
T ss_dssp CCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT----EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred eeccccccccccccceeEEecCCCceEEEEecCC----EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCC
Confidence 433211 11122333455566666665 699999999999999999999999999999999999999999
Q ss_pred cEEEEecCcccccccc
Q psy10063 868 FVRLHTFDQAYFDYTF 883 (894)
Q Consensus 868 ~V~vWdl~~~~~~~~~ 883 (894)
.|+||+++.++.+...
T Consensus 357 ~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 357 NILAWVPSLYEPVPDD 372 (408)
T ss_dssp CEEEEEECC-------
T ss_pred eEEEEeCCCCCccCCC
Confidence 9999999988776544
No 39
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-34 Score=329.31 Aligned_cols=302 Identities=13% Similarity=0.122 Sum_probs=240.5
Q ss_pred eeeeccCccEEEec----CCCeEEEEE-ecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCC---Ce---EEEEecCC
Q psy10063 383 LNSMSPAARKLATN----AEPVVKMQV-TDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRM---GR---ELESISGH 450 (894)
Q Consensus 383 ~~~~s~dg~~l~~~----~~~~~~~~l-~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~t---g~---~~~~l~~h 450 (894)
...|+++++.++.. ....+...+ .+|.+.|.+|+|+| ++++|++|+.||.|+|||+.. +. ....+ +|
T Consensus 32 ~~~f~~~~~~~~~~~~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h 110 (437)
T 3gre_A 32 YKEFGPIQEIVRSPNMGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DC 110 (437)
T ss_dssp CGGGCCCCCCCCCCCGGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-EC
T ss_pred hhhcCCccccccccccccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cC
Confidence 34577777777644 234555566 89999999999999 999999999999999999876 43 12222 35
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcC---CCcEEEEEe------------
Q psy10063 451 AKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH---DRQLLKTYT------------ 515 (894)
Q Consensus 451 ~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~---~~~~~~~~~------------ 515 (894)
.. .|.+|+|+|++++|++|+.||.|+|||++ .++++..+.
T Consensus 111 ~~-------------------------~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~ 165 (437)
T 3gre_A 111 SS-------------------------TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNF 165 (437)
T ss_dssp SS-------------------------CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGG
T ss_pred CC-------------------------CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCc
Confidence 54 78999999999999999999999999995 565554433
Q ss_pred -CCCCeeEEE--EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC--CCCCeEEEEEecCCCEEEE
Q psy10063 516 -TERPVNSAA--LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG--HFGPINSLAFHPDGKSYAS 590 (894)
Q Consensus 516 -~~~~v~~l~--~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~--h~~~V~~l~~spdg~~l~s 590 (894)
+...+.++. +++++.+|++++.++. |++||++.++++..+.+ |.+.|.+++|+|++++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~--------------i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 231 (437)
T 3gre_A 166 GKNEYAVRMRAFVNEEKSLLVALTNLSR--------------VIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLIL 231 (437)
T ss_dssp SSCCCEEEEEEEECSSCEEEEEEETTSE--------------EEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEE
T ss_pred ccccCceEEEEEEcCCCCEEEEEeCCCe--------------EEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEE
Confidence 345566666 6688999999999986 89999999999999988 8999999999999999999
Q ss_pred EeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHH
Q psy10063 591 GGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEM 670 (894)
Q Consensus 591 gs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~ 670 (894)
|+.||.|++||++.++.+. .+
T Consensus 232 ~~~dg~i~iwd~~~~~~~~-------------------------~~---------------------------------- 252 (437)
T 3gre_A 232 GTTRGIIDIWDIRFNVLIR-------------------------SW---------------------------------- 252 (437)
T ss_dssp EETTSCEEEEETTTTEEEE-------------------------EE----------------------------------
T ss_pred EcCCCeEEEEEcCCccEEE-------------------------EE----------------------------------
Confidence 9999999999997543110 00
Q ss_pred hhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCC
Q psy10063 671 ARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDG 750 (894)
Q Consensus 671 ~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg 750 (894)
T Consensus 253 -------------------------------------------------------------------------------- 252 (437)
T 3gre_A 253 -------------------------------------------------------------------------------- 252 (437)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcceecCCCCceEEE----eeCCCCCEEEEecCCCcEEEEEccCCceeeccc---------------------------
Q psy10063 751 SDTPILAGPVDIGFKM----PEPPKREKLALALADKVSERYRDRKNKATAGFL--------------------------- 799 (894)
Q Consensus 751 ~~~~~~~~h~~~v~~l----a~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~--------------------------- 799 (894)
...|...|.++ +|++++.+|++++.|+.|+|||++.++.+..+.
T Consensus 253 -----~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 327 (437)
T 3gre_A 253 -----SFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIR 327 (437)
T ss_dssp -----BCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCC
T ss_pred -----ecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccc
Confidence 00133345566 556778899999999999999998877644332
Q ss_pred --cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC----------------------------------
Q psy10063 800 --LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG---------------------------------- 843 (894)
Q Consensus 800 --~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g---------------------------------- 843 (894)
..+..++|+ ++.+|++++.|+ .|+|||+..++++..+.+
T Consensus 328 ~~~~v~~l~~~-~~~~l~s~~~d~----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (437)
T 3gre_A 328 SLNALSTISVS-NDKILLTDEATS----SIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDD 402 (437)
T ss_dssp SGGGGCCEEEE-TTEEEEEEGGGT----EEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC---------
T ss_pred cCCceEEEEEC-CceEEEecCCCC----eEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCc
Confidence 224567788 778899988887 699999999988877766
Q ss_pred ---CCCCeeEEEEeeC--CcEEEEecCCCcEEEEe
Q psy10063 844 ---HFGPINSLAFHPD--GKSYASGGEDGFVRLHT 873 (894)
Q Consensus 844 ---H~~~V~~l~fSpd--g~~LaS~s~Dg~V~vWd 873 (894)
|.+.|.+|+|+++ +.+|++|+.||.|+||+
T Consensus 403 ~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 403 SLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ----CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8999999999998 88999999999999995
No 40
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-33 Score=305.41 Aligned_cols=293 Identities=10% Similarity=0.055 Sum_probs=244.6
Q ss_pred eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063 400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI 479 (894)
Q Consensus 400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V 479 (894)
.+...+.+|.+.|.+++| +++++|++|+.||.|+|||+..++.+..+..|.. .|
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~-------------------------~v 62 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQG-------------------------FL 62 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSS-------------------------CE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCc-------------------------cE
Confidence 566788999999999999 9999999999999999999999999999998887 78
Q ss_pred EEEEEecCCCEEEEEECCCCEEEEEcCCC---cEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063 480 NDMQFSKDATMFITASKDHTAKLFTTHDR---QLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA 555 (894)
Q Consensus 480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~---~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v 555 (894)
.+++|+|++++|++++.||.|++|++... +.+..+. +...|.+++| ++.+|++++.++. |
T Consensus 63 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~--------------i 126 (313)
T 3odt_A 63 NSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKT--------------A 126 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSE--------------E
T ss_pred EEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCC--------------E
Confidence 89999999999999999999999998764 4555555 5688999999 6789999999997 7
Q ss_pred EEEeccccceEEEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063 556 RFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH 634 (894)
Q Consensus 556 ~vwd~~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~ 634 (894)
++|| .++.+..+..|...|.+++|.+ ++.+|++++.||.|++||..... .
T Consensus 127 ~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---------------------------~ 177 (313)
T 3odt_A 127 KVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVI---------------------------K 177 (313)
T ss_dssp EEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEE---------------------------E
T ss_pred EEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceE---------------------------E
Confidence 8888 6777888889999999999998 89999999999999999832100 0
Q ss_pred EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063 635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH 714 (894)
Q Consensus 635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ 714 (894)
.
T Consensus 178 ~------------------------------------------------------------------------------- 178 (313)
T 3odt_A 178 T------------------------------------------------------------------------------- 178 (313)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred E-------------------------------------------------------------------------------
Confidence 0
Q ss_pred CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce
Q psy10063 715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA 794 (894)
Q Consensus 715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~ 794 (894)
+...|...+.+++|+|++. |++++.|+.|++||++.++.
T Consensus 179 ----------------------------------------~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 179 ----------------------------------------FSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDV 217 (313)
T ss_dssp ----------------------------------------ECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCE
T ss_pred ----------------------------------------EeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhh
Confidence 0011556688999999988 99999999999999998887
Q ss_pred eeccc---cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEE
Q psy10063 795 TAGFL---LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRL 871 (894)
Q Consensus 795 ~~~~~---~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~v 871 (894)
+..+. ..+..++|++++ ++++++.++ .|+|||+..++++..+..|...|.+++|+|+++ |++++.||.|+|
T Consensus 218 ~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg----~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i 291 (313)
T 3odt_A 218 LRTYEGHESFVYCIKLLPNG-DIVSCGEDR----TVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRI 291 (313)
T ss_dssp EEEEECCSSCEEEEEECTTS-CEEEEETTS----EEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEE
T ss_pred hhhhhcCCceEEEEEEecCC-CEEEEecCC----EEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEE
Confidence 65543 445578899999 688888776 699999999999999999999999999999999 667899999999
Q ss_pred EecCccccccccccCccc
Q psy10063 872 HTFDQAYFDYTFDISEEF 889 (894)
Q Consensus 872 Wdl~~~~~~~~~~~~~~~ 889 (894)
|+++.+++....+++.++
T Consensus 292 w~~~~~~~~~~~~~~~~~ 309 (313)
T 3odt_A 292 FSQEKSRWASEDEIKGEL 309 (313)
T ss_dssp EESCGGGCCC--------
T ss_pred EeCCCCceeehhhhhhhh
Confidence 999999888777765544
No 41
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.5e-34 Score=328.50 Aligned_cols=345 Identities=8% Similarity=0.041 Sum_probs=252.4
Q ss_pred EEEecCCCC---EEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063 403 MQVTDQSAK---ITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI 479 (894)
Q Consensus 403 ~~l~~H~~~---V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V 479 (894)
+.+.++... +.+++|+|+|++|++|+.||.|+|||+..++....+..| . .+
T Consensus 47 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~-------------------------~~ 100 (420)
T 3vl1_A 47 IVVLGNSRGVDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-D-------------------------YT 100 (420)
T ss_dssp EECCSTTTCCBCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-C-------------------------EE
T ss_pred EeecCCCcccccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-C-------------------------ce
Confidence 344444433 448999999999999999999999999988766555554 2 35
Q ss_pred EEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063 480 NDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY 558 (894)
Q Consensus 480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw 558 (894)
....|++++++|++|+.||.|+|||++.++++..+. |...|.+++|+|++++|++++.++. |++|
T Consensus 101 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~--------------i~iw 166 (420)
T 3vl1_A 101 AVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQ--------------LKIW 166 (420)
T ss_dssp EEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSE--------------EEEE
T ss_pred EEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCe--------------EEEE
Confidence 556788999999999999999999999999888864 6789999999999999999999996 8999
Q ss_pred eccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC-------CCceeeeEECcCCcEEEecCC
Q psy10063 559 HLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE-------GSFTSSSTQQPDGLVYPSQGG 631 (894)
Q Consensus 559 d~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~-------~~~v~~~~~spdg~~l~~~~g 631 (894)
|+..++.+..+.+|...|.+++|+|++++|++++.||.|++||++.++.+.. ...+..+++.+.+...
T Consensus 167 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----- 241 (420)
T 3vl1_A 167 SVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ----- 241 (420)
T ss_dssp ETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS-----
T ss_pred eCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce-----
Confidence 9999999999999999999999999999999999999999999987764321 1122222222211000
Q ss_pred eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063 632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS 711 (894)
Q Consensus 632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 711 (894)
+... + ... ...+.
T Consensus 242 -----------------~~~~--------------------------~---------~~~---------------v~~~~ 254 (420)
T 3vl1_A 242 -----------------LHEI--------------------------S---------TSK---------------KNNLE 254 (420)
T ss_dssp -----------------CGGG--------------------------C---------CCC---------------CCTTC
T ss_pred -----------------eeec--------------------------c---------cCc---------------ccceE
Confidence 0000 0 000 01123
Q ss_pred EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC-EEEEecCCCcEEEEEcc
Q psy10063 712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE-KLALALADKVSERYRDR 790 (894)
Q Consensus 712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~-~Latgs~Dg~I~iwd~~ 790 (894)
++++|..++.+..++. +.+|+...+... ..+..+|...|.+++|+|++. +|++|+.||.|++||++
T Consensus 255 ~s~~~~~l~~~~~dg~-------i~i~d~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 255 FGTYGKYVIAGHVSGV-------ITVHNVFSKEQT------IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp SSCTTEEEEEEETTSC-------EEEEETTTCCEE------EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred EcCCCCEEEEEcCCCe-------EEEEECCCCcee------EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence 3344444444332222 444543322211 112345788899999999999 99999999999999998
Q ss_pred CCce-eeccccCC---CceEeecCCCeEEEEecCCCCceeEEEeecCCc---------ceeeeccCCCCCeeEEEEeeCC
Q psy10063 791 KNKA-TAGFLLSC---PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE---------EEFARIKGHFGPINSLAFHPDG 857 (894)
Q Consensus 791 ~~~~-~~~~~~~~---~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg---------~~l~~l~gH~~~V~~l~fSpdg 857 (894)
.++. +..+...+ -..+++++++++++++.|+ .|+||++... .....+.+|.+.|.+++|+||+
T Consensus 322 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 397 (420)
T 3vl1_A 322 SPECPVGEFLINEGTPINNVYFAAGALFVSSGFDT----SIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDD 397 (420)
T ss_dssp CTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTE----EEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCS
T ss_pred CCcCchhhhhccCCCCceEEEeCCCCEEEEecCCc----cEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCC
Confidence 8754 33332212 2234667888999988887 6999998763 2233466899999999999999
Q ss_pred c---EEEEecCCCcEEEEecCc
Q psy10063 858 K---SYASGGEDGFVRLHTFDQ 876 (894)
Q Consensus 858 ~---~LaS~s~Dg~V~vWdl~~ 876 (894)
+ .|+++|.+|.+++|+++.
T Consensus 398 ~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 398 ESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp SSSCEEEEEETTTEEEEEESCC
T ss_pred CCcceEEEEcCCceEEEEeccC
Confidence 9 788888899999999875
No 42
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.3e-34 Score=317.12 Aligned_cols=291 Identities=12% Similarity=0.124 Sum_probs=234.2
Q ss_pred eEEEEEecCCCCEEEEEEccCCC-EEEEecC---CCcEEEEecCCCeEEEEec-CCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063 400 VVKMQVTDQSAKITSLLWGNLDQ-YIITGHA---KGDICTWDLRMGRELESIS-GHAKEPINDMQFSKDATMFITASHSQ 474 (894)
Q Consensus 400 ~~~~~l~~H~~~V~~l~~spdg~-~L~sgs~---Dg~I~iWd~~tg~~~~~l~-~h~~~~V~~v~~spdg~~la~~~~d~ 474 (894)
.+...+.+|.+.|.+|+|+|++. +|++|+. ||.|+|||+..++...... +|..
T Consensus 9 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~---------------------- 66 (357)
T 3i2n_A 9 IIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAK---------------------- 66 (357)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESS----------------------
T ss_pred HhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccC----------------------
Confidence 55567789999999999999996 4556665 8999999999887654433 5665
Q ss_pred CccceEEEEEecC---CCEEEEEECCCCEEEEEcCCCc-EEEEEe-CCCCeeEEE------EcCCCCEEEEEECCCCeEE
Q psy10063 475 AVEPINDMQFSKD---ATMFITASKDHTAKLFTTHDRQ-LLKTYT-TERPVNSAA------LSPILPHVVLGGGQEAREV 543 (894)
Q Consensus 475 ~i~~V~~l~~spd---g~~L~sgs~Dg~V~iwdl~~~~-~~~~~~-~~~~v~~l~------~spdg~~l~~~~~~~~~~v 543 (894)
.|.+++|+|+ +.+|++|+.||.|++||+..++ ++..+. |...|.+++ |++++++|++++.++.
T Consensus 67 ---~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~--- 140 (357)
T 3i2n_A 67 ---PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT--- 140 (357)
T ss_dssp ---CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC---
T ss_pred ---cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe---
Confidence 6777778777 7999999999999999999888 777776 468899995 5789999999999997
Q ss_pred EeccCccceeeEEEEeccccc-eEEEccCCCC----CeEEEE----EecCCCEEEEEeCCCcEEEEECCCCccccCCCce
Q psy10063 544 TTTSTKVGKFDARFYHLIFEE-EFARIKGHFG----PINSLA----FHPDGKSYASGGEDGFLISNTLSNGLDISEGSFT 614 (894)
Q Consensus 544 ~~~~~~~~~~~v~vwd~~~~~-~~~~l~~h~~----~V~~l~----~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v 614 (894)
|++||+..++ .+..+..|.+ .|.+++ |++++++|++++.||.|++||++.++.+
T Consensus 141 -----------i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~------ 203 (357)
T 3i2n_A 141 -----------VKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR------ 203 (357)
T ss_dssp -----------EEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE------
T ss_pred -----------EEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee------
Confidence 8899998876 6777766554 899998 6789999999999999999998653210
Q ss_pred eeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcce
Q psy10063 615 SSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQS 694 (894)
Q Consensus 615 ~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 694 (894)
T Consensus 204 -------------------------------------------------------------------------------- 203 (357)
T 3i2n_A 204 -------------------------------------------------------------------------------- 203 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC---C
Q psy10063 695 VELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP---K 771 (894)
Q Consensus 695 ~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp---d 771 (894)
....|...|.+++|+| +
T Consensus 204 ------------------------------------------------------------~~~~~~~~v~~~~~~~~~~~ 223 (357)
T 3i2n_A 204 ------------------------------------------------------------WETNIKNGVCSLEFDRKDIS 223 (357)
T ss_dssp ------------------------------------------------------------EEEECSSCEEEEEESCSSSS
T ss_pred ------------------------------------------------------------eecCCCCceEEEEcCCCCCC
Confidence 0112445688999999 9
Q ss_pred CCEEEEecCCCcEEEEEccCCceee--------ccccCCCceEeecCCC-eEEEEecCCCCceeEEEeecCCc-------
Q psy10063 772 REKLALALADKVSERYRDRKNKATA--------GFLLSCPDFLFDFDTT-REVTTTSTKVGKFDARFYHLIFE------- 835 (894)
Q Consensus 772 g~~Latgs~Dg~I~iwd~~~~~~~~--------~~~~~~~~~~fS~dg~-~l~~as~d~~g~~~I~vwd~~tg------- 835 (894)
+.+|++++.|+.|++||++..+.+. .+...+..++|++++. ++++++.++ .|+|||+..+
T Consensus 224 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 224 MNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG----GLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp CCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS----EEEEEEEECCSCC--CC
T ss_pred CCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC----cEEEeecCCCccccccc
Confidence 9999999999999999988765432 3444566788999999 788888877 6999999754
Q ss_pred ------------ceeeeccCCCCCeeEEEEeeCCcEEE-EecCCCcEEEEecCcccc
Q psy10063 836 ------------EEFARIKGHFGPINSLAFHPDGKSYA-SGGEDGFVRLHTFDQAYF 879 (894)
Q Consensus 836 ------------~~l~~l~gH~~~V~~l~fSpdg~~La-S~s~Dg~V~vWdl~~~~~ 879 (894)
+++..+.+|.+.|.+|+|+|+|++|+ +++.||.|+||++....+
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred CCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 46677889999999999999999998 899999999999987653
No 43
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.8e-33 Score=317.84 Aligned_cols=289 Identities=15% Similarity=0.181 Sum_probs=234.0
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC--CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG--HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD 487 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~--h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd 487 (894)
..+..|+||++ .+|++|. |+.|+|||+.+|++++.+.. |.. .|.+|+|+|+
T Consensus 106 ~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~-------------------------~V~sv~fspd 158 (420)
T 4gga_A 106 YYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGE-------------------------YISSVAWIKE 158 (420)
T ss_dssp TTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTC-------------------------CEEEEEECTT
T ss_pred ccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCC-------------------------cEEEEEECCC
Confidence 34678999975 4777775 89999999999998877764 444 6899999999
Q ss_pred CCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc-ce
Q psy10063 488 ATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE-EE 565 (894)
Q Consensus 488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~-~~ 565 (894)
|++|++|+.||.|+|||++++++++.+.+ ...+.+++|+ +.+|++++.++. +++||.... ..
T Consensus 159 g~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~--------------i~~~d~~~~~~~ 222 (420)
T 4gga_A 159 GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGH--------------IHHHDVRVAEHH 222 (420)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSE--------------EEEEETTSSSCE
T ss_pred CCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCc--------------eeEeeeccccee
Confidence 99999999999999999999999998875 4678777775 679999999986 778887654 45
Q ss_pred EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCC
Q psy10063 566 FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTD 645 (894)
Q Consensus 566 ~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d 645 (894)
+..+.+|...+.++.|++++++|++++.|+.|++|++..++...
T Consensus 223 ~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~------------------------------------ 266 (420)
T 4gga_A 223 VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW------------------------------------ 266 (420)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCS------------------------------------
T ss_pred eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccc------------------------------------
Confidence 66788999999999999999999999999999999986543110
Q ss_pred CCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccC
Q psy10063 646 TGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFD 725 (894)
Q Consensus 646 ~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~ 725 (894)
T Consensus 267 -------------------------------------------------------------------------------- 266 (420)
T 4gga_A 267 -------------------------------------------------------------------------------- 266 (420)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC-EEEE--ecCCCcEEEEEccCCceeeccccC-
Q psy10063 726 EQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE-KLAL--ALADKVSERYRDRKNKATAGFLLS- 801 (894)
Q Consensus 726 ~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~-~Lat--gs~Dg~I~iwd~~~~~~~~~~~~~- 801 (894)
..+.....|...|.+++|+|++. +|++ |+.|+.|+|||+..++.+..+...
T Consensus 267 -------------------------~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~ 321 (420)
T 4gga_A 267 -------------------------VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS 321 (420)
T ss_dssp -------------------------CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS
T ss_pred -------------------------eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc
Confidence 00012334667788999999754 4444 568999999999999887665543
Q ss_pred -CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccc
Q psy10063 802 -CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFD 880 (894)
Q Consensus 802 -~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~ 880 (894)
+..++|++++..++++++...+ .|+|||+.+++++..|.+|.+.|.+|+|+|||++||+||.||.|+||++.+....
T Consensus 322 ~v~~~~~~~~~~~lv~~sg~~d~--~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 322 QVCSILWSPHYKELISGHGFAQN--QLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp CEEEEEEETTTTEEEEEECTTTC--CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC
T ss_pred ceeeeeecCCCCeEEEEEecCCC--EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCcc
Confidence 3466799999999998765433 6999999999999999999999999999999999999999999999999765544
Q ss_pred cccc
Q psy10063 881 YTFD 884 (894)
Q Consensus 881 ~~~~ 884 (894)
.+.+
T Consensus 400 ~~~~ 403 (420)
T 4gga_A 400 RRRE 403 (420)
T ss_dssp ----
T ss_pred chhh
Confidence 4443
No 44
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.1e-33 Score=304.95 Aligned_cols=243 Identities=16% Similarity=0.222 Sum_probs=217.1
Q ss_pred EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063 403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM 482 (894)
Q Consensus 403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l 482 (894)
..+.+|...|.+++|++++.+|++|+.|+.|+|||+.++++++.+..|.. .+.++
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~-------------------------~~~~~ 128 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPV-------------------------DAWTL 128 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTT-------------------------CCCCE
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCc-------------------------cEEEE
Confidence 35789999999999999999999999999999999999999999988876 67888
Q ss_pred EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063 483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI 561 (894)
Q Consensus 483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~ 561 (894)
+|+|++++|++|+.||.|+|||++.++....+.. ...|.+++|+|+|++|++++.++. |++||++
T Consensus 129 ~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~--------------i~iwd~~ 194 (321)
T 3ow8_A 129 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI--------------INIFDIA 194 (321)
T ss_dssp EECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSC--------------EEEEETT
T ss_pred EECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCe--------------EEEEECC
Confidence 8999999999999999999999999998888775 578999999999999999999997 8999999
Q ss_pred ccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccC
Q psy10063 562 FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHST 641 (894)
Q Consensus 562 ~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~ 641 (894)
.++.+..+.+|...|.+|+|+|++++|++|+.||.|+|||++.++.+
T Consensus 195 ~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~--------------------------------- 241 (321)
T 3ow8_A 195 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA--------------------------------- 241 (321)
T ss_dssp TTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEE---------------------------------
T ss_pred CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCccee---------------------------------
Confidence 99999999999999999999999999999999999999998643210
Q ss_pred CCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEe
Q psy10063 642 SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHV 721 (894)
Q Consensus 642 ~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v 721 (894)
T Consensus 242 -------------------------------------------------------------------------------- 241 (321)
T 3ow8_A 242 -------------------------------------------------------------------------------- 241 (321)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc--
Q psy10063 722 NPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL-- 799 (894)
Q Consensus 722 ~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~-- 799 (894)
..+.+|...|.+++|+|++.+|++++.|+.|+|||+..++++..+.
T Consensus 242 --------------------------------~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h 289 (321)
T 3ow8_A 242 --------------------------------GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH 289 (321)
T ss_dssp --------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred --------------------------------EEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCC
Confidence 1234577789999999999999999999999999999888766543
Q ss_pred -cCCCceEeecCCCeEEEEecCCCCceeEEEeecC
Q psy10063 800 -LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLI 833 (894)
Q Consensus 800 -~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~ 833 (894)
..+..++|++++++|++++.|+ .|+|||+.
T Consensus 290 ~~~v~~v~~s~~g~~l~s~~~d~----~i~vwd~p 320 (321)
T 3ow8_A 290 QDQVWGVKYNGNGSKIVSVGDDQ----EIHIYDCP 320 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTC----CEEEEECC
T ss_pred CCcEEEEEECCCCCEEEEEeCCC----eEEEEeCC
Confidence 4456788999999999999988 59999963
No 45
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2e-33 Score=308.27 Aligned_cols=301 Identities=16% Similarity=0.150 Sum_probs=223.1
Q ss_pred EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC----eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063 402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG----RELESISGHAKEPINDMQFSKDATMFITASHSQAVE 477 (894)
Q Consensus 402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg----~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~ 477 (894)
+..+.+|.+.|.+|+|+|++++|++|+.||.|+|||+..+ +.+..+.+|..
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~------------------------- 58 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDS------------------------- 58 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSS-------------------------
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCC-------------------------
Confidence 3467899999999999999999999999999999999876 56777888887
Q ss_pred ceEEEEEec--CCCEEEEEECCCCEEEEEcCCC---------cEEEEEe-CCCCeeEEEEcCC--CCEEEEEECCCCeEE
Q psy10063 478 PINDMQFSK--DATMFITASKDHTAKLFTTHDR---------QLLKTYT-TERPVNSAALSPI--LPHVVLGGGQEAREV 543 (894)
Q Consensus 478 ~V~~l~~sp--dg~~L~sgs~Dg~V~iwdl~~~---------~~~~~~~-~~~~v~~l~~spd--g~~l~~~~~~~~~~v 543 (894)
.|.+|+|+| ++++|++|+.||.|+|||++.+ +++..+. +...|.+++|+|+ +.+|++++.++.
T Consensus 59 ~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~--- 135 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGI--- 135 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCE---
T ss_pred cEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCc---
Confidence 788888888 6899999999999999999887 4566665 4688999999999 999999999997
Q ss_pred EeccCccceeeEEEEeccccceEEEc-------------cCCCCCeEEEEEecC---CCEEEEEeCCCcEEEEECCCCcc
Q psy10063 544 TTTSTKVGKFDARFYHLIFEEEFARI-------------KGHFGPINSLAFHPD---GKSYASGGEDGFLISNTLSNGLD 607 (894)
Q Consensus 544 ~~~~~~~~~~~v~vwd~~~~~~~~~l-------------~~h~~~V~~l~~spd---g~~l~sgs~Dg~I~vwdl~~~~~ 607 (894)
|++||++.++.+..+ .+|...|.+++|+|+ +.+|++++.|+.+.+|+...++.
T Consensus 136 -----------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 204 (351)
T 3f3f_A 136 -----------LRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL 204 (351)
T ss_dssp -----------EEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE
T ss_pred -----------EEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce
Confidence 677777666543332 268889999999997 89999999999997776543210
Q ss_pred ccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEee
Q psy10063 608 ISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVN 687 (894)
Q Consensus 608 ~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~ 687 (894)
. .
T Consensus 205 ~--------------------------~---------------------------------------------------- 206 (351)
T 3f3f_A 205 H--------------------------V---------------------------------------------------- 206 (351)
T ss_dssp E--------------------------E----------------------------------------------------
T ss_pred e--------------------------e----------------------------------------------------
Confidence 0 0
Q ss_pred ccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEe
Q psy10063 688 PFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMP 767 (894)
Q Consensus 688 ~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la 767 (894)
...+.+|...|.+++
T Consensus 207 -----------------------------------------------------------------~~~~~~h~~~i~~~~ 221 (351)
T 3f3f_A 207 -----------------------------------------------------------------AAKLPGHKSLIRSIS 221 (351)
T ss_dssp -----------------------------------------------------------------EEECCCCCSCEEEEE
T ss_pred -----------------------------------------------------------------eeecCCCCcceeEEE
Confidence 002345778899999
Q ss_pred eCCCC----CEEEEecCCCcEEEEEccCCceeeccccC---CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeee
Q psy10063 768 EPPKR----EKLALALADKVSERYRDRKNKATAGFLLS---CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR 840 (894)
Q Consensus 768 ~spdg----~~Latgs~Dg~I~iwd~~~~~~~~~~~~~---~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~ 840 (894)
|+|++ .+|++++.||.|++||+............ .....++.+...+..+.........+.+|+...++++..
T Consensus 222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE 301 (351)
T ss_dssp ECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEE
T ss_pred ECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEE
Confidence 99998 89999999999999999876553332222 222234444444444444433333478888888899999
Q ss_pred ccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccc
Q psy10063 841 IKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFD 884 (894)
Q Consensus 841 l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~ 884 (894)
+.+|.+.|.+|+|+|++++|++++.||.|+||++..++....+.
T Consensus 302 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 302 HDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp ECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred EecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 99999999999999999999999999999999999876655443
No 46
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.9e-33 Score=315.97 Aligned_cols=269 Identities=14% Similarity=0.174 Sum_probs=232.1
Q ss_pred CCccceeeeeccCccEEEecCCC-eEE----------EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063 377 PLSVDRLNSMSPAARKLATNAEP-VVK----------MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE 445 (894)
Q Consensus 377 ~~~~~~~~~~s~dg~~l~~~~~~-~~~----------~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~ 445 (894)
+......++|+|++.+|+.++.+ .++ ..+.+|.+.|.+|+|+|+|++|++|+.|+.|+|||+..+++++
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR 186 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Confidence 33455667899999988877543 333 3678999999999999999999999999999999999999999
Q ss_pred EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEE
Q psy10063 446 SISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAA 524 (894)
Q Consensus 446 ~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~ 524 (894)
.+.+|.. .|.+++|+|++.+|++|+.|+.|++||++.++++..+.. ...|.+++
T Consensus 187 ~~~~h~~-------------------------~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~ 241 (410)
T 1vyh_C 187 TMHGHDH-------------------------NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241 (410)
T ss_dssp CCCCCSS-------------------------CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEcCCCC-------------------------CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEE
Confidence 9999987 788889999999999999999999999999999998875 57899999
Q ss_pred EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecC--------------------
Q psy10063 525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD-------------------- 584 (894)
Q Consensus 525 ~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd-------------------- 584 (894)
|+++|.+|++++.++. |++||+..++++..+.+|...|.+++|+|+
T Consensus 242 ~~~~g~~l~s~s~D~~--------------v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (410)
T 1vyh_C 242 PNQDGTLIASCSNDQT--------------VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKP 307 (410)
T ss_dssp ECTTSSEEEEEETTSC--------------EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------
T ss_pred ECCCCCEEEEEcCCCe--------------EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCC
Confidence 9999999999999997 899999999999999999999999999996
Q ss_pred CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEec
Q psy10063 585 GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTK 664 (894)
Q Consensus 585 g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~ 664 (894)
|.+|++|+.||.|++||++.++.+
T Consensus 308 g~~l~sgs~D~~i~iwd~~~~~~~-------------------------------------------------------- 331 (410)
T 1vyh_C 308 GPFLLSGSRDKTIKMWDVSTGMCL-------------------------------------------------------- 331 (410)
T ss_dssp CCEEEEEETTSEEEEEETTTTEEE--------------------------------------------------------
T ss_pred CCEEEEEeCCCeEEEEECCCCceE--------------------------------------------------------
Confidence 678999999999999998653210
Q ss_pred hhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCc
Q psy10063 665 DEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGT 744 (894)
Q Consensus 665 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~ 744 (894)
T Consensus 332 -------------------------------------------------------------------------------- 331 (410)
T 1vyh_C 332 -------------------------------------------------------------------------------- 331 (410)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec---cccCCCceEeecCCCeEEEEecCC
Q psy10063 745 PFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG---FLLSCPDFLFDFDTTREVTTTSTK 821 (894)
Q Consensus 745 ~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~---~~~~~~~~~fS~dg~~l~~as~d~ 821 (894)
..+.+|...|.+++|+|++++|++|+.|+.|++||+..++.+.. +...+..++|++++.++++++.|+
T Consensus 332 ---------~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~ 402 (410)
T 1vyh_C 332 ---------MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ 402 (410)
T ss_dssp ---------EEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTS
T ss_pred ---------EEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 02335777899999999999999999999999999988776443 344566788999999999999998
Q ss_pred CCceeEEEeecC
Q psy10063 822 VGKFDARFYHLI 833 (894)
Q Consensus 822 ~g~~~I~vwd~~ 833 (894)
.|+||+++
T Consensus 403 ----~i~vW~~r 410 (410)
T 1vyh_C 403 ----TVKVWECR 410 (410)
T ss_dssp ----EEEEEC--
T ss_pred ----cEEEEeCC
Confidence 69999863
No 47
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-34 Score=322.34 Aligned_cols=298 Identities=14% Similarity=0.078 Sum_probs=223.0
Q ss_pred EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC--eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063 405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG--RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM 482 (894)
Q Consensus 405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg--~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l 482 (894)
+..|.+.|.+++|+|+|++|++|+.|+.|+|||+..+ +++..+.+|.. .|.++
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~-------------------------~v~~~ 61 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDK-------------------------IVTCV 61 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSS-------------------------CEEEE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCc-------------------------eEEEE
Confidence 4457789999999999999999999999999999988 77888888887 78888
Q ss_pred EEecCCCEEEEEECCCCEEEEEcCCCc---EEEEE-eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063 483 QFSKDATMFITASKDHTAKLFTTHDRQ---LLKTY-TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY 558 (894)
Q Consensus 483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~---~~~~~-~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw 558 (894)
+|+|++++|++++.|+.|+|||++.++ .+..+ .|...|.+++|+|++++|++++.++. |++|
T Consensus 62 ~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~iw 127 (377)
T 3dwl_C 62 DWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARV--------------ISVC 127 (377)
T ss_dssp EECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSC--------------EEEC
T ss_pred EEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCe--------------EEEE
Confidence 999999999999999999999999887 34443 46789999999999999999999997 8888
Q ss_pred eccccc---eEEEccC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063 559 HLIFEE---EFARIKG-HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH 634 (894)
Q Consensus 559 d~~~~~---~~~~l~~-h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~ 634 (894)
|++.++ .+..+.+ |...|.+++|+|++++|++++.||.|++||++.........
T Consensus 128 d~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---------------------- 185 (377)
T 3dwl_C 128 YFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPE---------------------- 185 (377)
T ss_dssp CC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCC----------------------
T ss_pred EECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCcc----------------------
Confidence 888776 4677777 99999999999999999999999999999986542110000
Q ss_pred EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063 635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH 714 (894)
Q Consensus 635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ 714 (894)
...| +. .+.
T Consensus 186 -------------------------~~~~-----------------~~-------------------~~~---------- 194 (377)
T 3dwl_C 186 -------------------------ASVW-----------------GS-------------------RLP---------- 194 (377)
T ss_dssp -------------------------SCSS-----------------CS-------------------CCC----------
T ss_pred -------------------------cccc-----------------cc-------------------ccc----------
Confidence 0000 00 000
Q ss_pred CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce
Q psy10063 715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA 794 (894)
Q Consensus 715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~ 794 (894)
.+.....+ +|...|.+++|+|++++|++++.|+.|+|||+..++.
T Consensus 195 ----------------------------------~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 195 ----------------------------------FNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp ----------------------------------EEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred ----------------------------------hhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 00001122 6888899999999999999999999999999988765
Q ss_pred ----ee---ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc--ee---------------------------
Q psy10063 795 ----TA---GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE--EF--------------------------- 838 (894)
Q Consensus 795 ----~~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~--~l--------------------------- 838 (894)
+. .+...+..++|++++++|++++.++ +.+|+...+. ..
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLLWANESAIVAAGYNYS-----PILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGP 314 (377)
T ss_dssp CEEECCCEECSSSCEEEEEEEETTEEEEEESSSS-----EEEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---
T ss_pred cceeeEeecCCCCceEEEEEcCCCCEEEEEcCCc-----EEEEEeCCCceEEEeeecccccccccccccccccccccccc
Confidence 33 3334456788999999998887664 5677765211 00
Q ss_pred -------e----------------eccCCCCCeeEEEEeeCC-c---EEEEecCCCcEEEEec
Q psy10063 839 -------A----------------RIKGHFGPINSLAFHPDG-K---SYASGGEDGFVRLHTF 874 (894)
Q Consensus 839 -------~----------------~l~gH~~~V~~l~fSpdg-~---~LaS~s~Dg~V~vWdl 874 (894)
. ...+|...|.+|++.++. . +|++||.||.|+||++
T Consensus 315 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 315 VSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ----------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 012399999999976644 3 6999999999999986
No 48
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-32 Score=298.21 Aligned_cols=279 Identities=16% Similarity=0.199 Sum_probs=225.2
Q ss_pred EEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC--CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063 412 ITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG--HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT 489 (894)
Q Consensus 412 V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~--h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~ 489 (894)
+.+|+||+++ +|++| .|+.|+|||+.+|++++.+.. |.. .|.+|+|+|+++
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~-------------------------~V~~v~~~~~~~ 80 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGE-------------------------YISSVAWIKEGN 80 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTC-------------------------CEEEEEECTTSS
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCC-------------------------eEEEEEECCCCC
Confidence 5789999986 77776 489999999999999887764 444 689999999999
Q ss_pred EEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc-ceEE
Q psy10063 490 MFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE-EEFA 567 (894)
Q Consensus 490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~-~~~~ 567 (894)
+|++|+.||.|+|||++++++++.+..+ ..+.+ +++++..|++++.++. +++|+...+ ..+.
T Consensus 81 ~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~--~~~~~~~l~s~~~~~~--------------~~~~~~~~~~~~~~ 144 (318)
T 4ggc_A 81 YLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS--LSWNSYILSSGSRSGH--------------IHHHDVRVAEHHVA 144 (318)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE--EEEETTEEEEEETTSE--------------EEEEETTSSSCEEE
T ss_pred EEEEEECCCcEEEeecCCceeEEEecCccceEEE--eecCCCEEEEEecCCc--------------eEeeecCCCceeEE
Confidence 9999999999999999999999988764 45554 4556789999999886 666766654 4566
Q ss_pred EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCC
Q psy10063 568 RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTG 647 (894)
Q Consensus 568 ~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~ 647 (894)
.+.+|...+.+++|++++++|++++.||.|++||++.++....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~------------------------------------- 187 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV------------------------------------- 187 (318)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSC-------------------------------------
T ss_pred EEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccc-------------------------------------
Confidence 7889999999999999999999999999999999876432100
Q ss_pred eeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCcc
Q psy10063 648 GVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQ 727 (894)
Q Consensus 648 ~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~ 727 (894)
T Consensus 188 -------------------------------------------------------------------------------- 187 (318)
T 4ggc_A 188 -------------------------------------------------------------------------------- 187 (318)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEE---EEecCCCcEEEEEccCCceeeccc--cCC
Q psy10063 728 QSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKL---ALALADKVSERYRDRKNKATAGFL--LSC 802 (894)
Q Consensus 728 ~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~L---atgs~Dg~I~iwd~~~~~~~~~~~--~~~ 802 (894)
.......|...|.++++++++..+ ++++.++.|++|+........... ..+
T Consensus 188 ------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v 243 (318)
T 4ggc_A 188 ------------------------PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQV 243 (318)
T ss_dssp ------------------------CSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCE
T ss_pred ------------------------ceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeee
Confidence 000122344556777777765533 467889999999998887755443 334
Q ss_pred CceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063 803 PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ 876 (894)
Q Consensus 803 ~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~ 876 (894)
..++|++++..++++++...+ .|+|||+.+++++..+++|.+.|.+|+|+|||++||+||.||.|+|||+.+
T Consensus 244 ~~~~~~~~~~~~~~~sg~~d~--~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 244 CSILWSPHYKELISGHGFAQN--QLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEEEETTTTEEEEEECTTTC--CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred eeeeecccccceEEEEEcCCC--EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 567799999999988765433 699999999999999999999999999999999999999999999999965
No 49
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9.4e-34 Score=316.65 Aligned_cols=293 Identities=12% Similarity=0.055 Sum_probs=221.5
Q ss_pred CCCCEEEEEEccCCCEEEEecCCC-------cEEEEecCCCeE----------EEEecCCCCCCeeEEEEcCCCCEEEEE
Q psy10063 408 QSAKITSLLWGNLDQYIITGHAKG-------DICTWDLRMGRE----------LESISGHAKEPINDMQFSKDATMFITA 470 (894)
Q Consensus 408 H~~~V~~l~~spdg~~L~sgs~Dg-------~I~iWd~~tg~~----------~~~l~~h~~~~V~~v~~spdg~~la~~ 470 (894)
-..+|.||+|+|||++|++|+.|. .|+||++..+.. ...|.+|.. .|.+++++ +..++++
T Consensus 13 ~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~-~v~s~~~~--~~~~~~g 89 (365)
T 4h5i_A 13 VGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDD-SPTAIDAS--KGIILVG 89 (365)
T ss_dssp CSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSC-CCCEEEEE--TTEEEEE
T ss_pred CCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCC-ceEEEEeC--CCEEEEE
Confidence 346899999999999999997654 499999876532 123556666 66666553 4445444
Q ss_pred eCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE-EE---EEe------CCCCeeEEEEcCCCCEEEEEEC--C
Q psy10063 471 SHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQL-LK---TYT------TERPVNSAALSPILPHVVLGGG--Q 538 (894)
Q Consensus 471 ~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~-~~---~~~------~~~~v~~l~~spdg~~l~~~~~--~ 538 (894)
.. .++.+|++++.|+.||+|++..+.. +. ... ++..+.+++|+|||++|+++++ +
T Consensus 90 ~~-------------~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d 156 (365)
T 4h5i_A 90 CN-------------ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVP 156 (365)
T ss_dssp CC-------------CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSS
T ss_pred EC-------------CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCC
Confidence 33 2344566777899999999875432 22 111 1245889999999999987764 3
Q ss_pred CCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeE
Q psy10063 539 EAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSST 618 (894)
Q Consensus 539 ~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~ 618 (894)
+. |++||+++++++..+. |.+.|.+|+|+|||++|++++.+ .+++|+...++.+.
T Consensus 157 ~~--------------i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~--------- 211 (365)
T 4h5i_A 157 AI--------------MRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIA--------- 211 (365)
T ss_dssp CE--------------EEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEE---------
T ss_pred CE--------------EEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCccee---------
Confidence 43 8999999999998885 77889999999999999999855 46666654332100
Q ss_pred ECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEec
Q psy10063 619 QQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELT 698 (894)
Q Consensus 619 ~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s 698 (894)
.
T Consensus 212 ----------------~--------------------------------------------------------------- 212 (365)
T 4h5i_A 212 ----------------R--------------------------------------------------------------- 212 (365)
T ss_dssp ----------------E---------------------------------------------------------------
T ss_pred ----------------e---------------------------------------------------------------
Confidence 0
Q ss_pred cCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEe
Q psy10063 699 KDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALA 778 (894)
Q Consensus 699 ~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latg 778 (894)
....+|...|.+++|+|++.+|+++
T Consensus 213 -------------------------------------------------------~~~~~~~~~v~~v~fspdg~~l~~~ 237 (365)
T 4h5i_A 213 -------------------------------------------------------KTDFDKNWSLSKINFIADDTVLIAA 237 (365)
T ss_dssp -------------------------------------------------------ECCCCTTEEEEEEEEEETTEEEEEE
T ss_pred -------------------------------------------------------eecCCCCCCEEEEEEcCCCCEEEEE
Confidence 0112355668899999999999999
Q ss_pred cCCC----cEEEEEccCCce-------eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeee-ccCCCC
Q psy10063 779 LADK----VSERYRDRKNKA-------TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR-IKGHFG 846 (894)
Q Consensus 779 s~Dg----~I~iwd~~~~~~-------~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~-l~gH~~ 846 (894)
+.|+ .|++|++..... +..+...+.+++|+|||++|++++.|+ .|+|||+++++++.. +.+|..
T Consensus 238 s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~----~V~iwd~~~~~~~~~~~~gH~~ 313 (365)
T 4h5i_A 238 SLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN----SIALVKLKDLSMSKIFKQAHSF 313 (365)
T ss_dssp EESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS----CEEEEETTTTEEEEEETTSSSS
T ss_pred ecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC----EEEEEECCCCcEEEEecCcccC
Confidence 9887 588898766543 223344566788999999999999998 599999999999987 579999
Q ss_pred CeeEEEEeeCCcEEEEecCCCcEEEEecCcccc
Q psy10063 847 PINSLAFHPDGKSYASGGEDGFVRLHTFDQAYF 879 (894)
Q Consensus 847 ~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~ 879 (894)
.|++|+|||||++|||||.|++||||++.....
T Consensus 314 ~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 314 AITEVTISPDSTYVASVSAANTIHIIKLPLNYA 346 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEECCTTTT
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 999999999999999999999999999975543
No 50
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-32 Score=311.69 Aligned_cols=296 Identities=11% Similarity=0.108 Sum_probs=236.2
Q ss_pred eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC-CCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063 400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG-HAKEPINDMQFSKDATMFITASHSQAVEP 478 (894)
Q Consensus 400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~-h~~~~V~~v~~spdg~~la~~~~d~~i~~ 478 (894)
...+...+|...+.+.+++.++..|++++.|+.|+|||+.+++.+..+.. |.. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~-------------------------~ 136 (401)
T 4aez_A 82 ERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDEST-------------------------Y 136 (401)
T ss_dssp SEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTC-------------------------C
T ss_pred ceeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCC-------------------------C
Confidence 33445557776654444444456688888999999999999998887776 554 7
Q ss_pred eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063 479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF 557 (894)
Q Consensus 479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v 557 (894)
|.+++|+|++++|++|+.||.|+|||+..++++..+. |...|.+++| ++.+|++++.++. |++
T Consensus 137 v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~--------------i~i 200 (401)
T 4aez_A 137 VASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGA--------------IHH 200 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSE--------------EEE
T ss_pred EEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCC--------------EEE
Confidence 8889999999999999999999999999999998887 4688999999 5679999999986 889
Q ss_pred Eecc-ccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063 558 YHLI-FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL 636 (894)
Q Consensus 558 wd~~-~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~ 636 (894)
||++ .+..+..+.+|.+.|.+++|+|++.+|++|+.||.|++||++.++.+
T Consensus 201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~---------------------------- 252 (401)
T 4aez_A 201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK---------------------------- 252 (401)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE----------------------------
T ss_pred EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc----------------------------
Confidence 9998 56678888999999999999999999999999999999998643210
Q ss_pred ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063 637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG 716 (894)
Q Consensus 637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g 716 (894)
T Consensus 253 -------------------------------------------------------------------------------- 252 (401)
T 4aez_A 253 -------------------------------------------------------------------------------- 252 (401)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC-EEEEec--CCCcEEEEEccCCc
Q psy10063 717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE-KLALAL--ADKVSERYRDRKNK 793 (894)
Q Consensus 717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~-~Latgs--~Dg~I~iwd~~~~~ 793 (894)
..+..|...|.+++|+|++. +|++++ .|+.|++||+..++
T Consensus 253 -------------------------------------~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 253 -------------------------------------FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp -------------------------------------EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred -------------------------------------EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 01224666788999999865 455544 79999999999888
Q ss_pred eeecccc--CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee--eccCCCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063 794 ATAGFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA--RIKGHFGPINSLAFHPDGKSYASGGEDGFV 869 (894)
Q Consensus 794 ~~~~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~--~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V 869 (894)
.+..+.. .+..++|++++.+++++++...| .|+|||+..++... .+.+|...|.+++|+|||++|++++.||.|
T Consensus 296 ~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg--~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i 373 (401)
T 4aez_A 296 RVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDN--NLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENL 373 (401)
T ss_dssp EEEEEECSSCEEEEEECSSSSEEEEEECTTTC--EEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEE
T ss_pred EEEEEeCCCcEEEEEECCCCCeEEEEeecCCC--cEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 7665543 35578899999999997643322 69999999865554 467999999999999999999999999999
Q ss_pred EEEecCcccccccc
Q psy10063 870 RLHTFDQAYFDYTF 883 (894)
Q Consensus 870 ~vWdl~~~~~~~~~ 883 (894)
+||++..++.+...
T Consensus 374 ~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 374 KFWRVYDGDHVKRP 387 (401)
T ss_dssp EEEECCC-------
T ss_pred EEEECCCCcccccc
Confidence 99999988776654
No 51
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.4e-32 Score=310.61 Aligned_cols=319 Identities=17% Similarity=0.229 Sum_probs=251.6
Q ss_pred EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063 402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND 481 (894)
Q Consensus 402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~ 481 (894)
...+.+|.+.|.. +++++|++|++|+.||.|+|||+.+++++..+.+|.. .|.+
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~-------------------------~v~~ 164 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG-------------------------GVWS 164 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSS-------------------------CEEE
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCC-------------------------CEEE
Confidence 3467899987643 3556799999999999999999999999999999988 6777
Q ss_pred EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063 482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL 560 (894)
Q Consensus 482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~ 560 (894)
++|+ +.+|++|+.||.|++||+.+++++..+.. ...|.+++|+ +.+|++++.++. |++||+
T Consensus 165 ~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~--------------i~~wd~ 226 (445)
T 2ovr_B 165 SQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDAT--------------LRVWDI 226 (445)
T ss_dssp EEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSE--------------EEEEES
T ss_pred EEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCE--------------EEEEEC
Confidence 7776 56899999999999999999999998874 5789999995 678999999986 899999
Q ss_pred cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063 561 IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS 640 (894)
Q Consensus 561 ~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~ 640 (894)
..++.+..+.+|...|.+++| ++.+|++|+.||.|++||++.++.+.. +..+.+.+..+..
T Consensus 227 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~---------------~~~~~~~v~~~~~-- 287 (445)
T 2ovr_B 227 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT---------------LQGHTNRVYSLQF-- 287 (445)
T ss_dssp SSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEE---------------ECCCSSCEEEEEE--
T ss_pred CCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEE---------------ecCCCCceEEEEE--
Confidence 999999999999999999999 788999999999999999976643211 0011122222221
Q ss_pred CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063 641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH 720 (894)
Q Consensus 641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~ 720 (894)
++..+++++ .++.+++|+..
T Consensus 288 ----~~~~l~~~~--~d~~i~i~d~~------------------------------------------------------ 307 (445)
T 2ovr_B 288 ----DGIHVVSGS--LDTSIRVWDVE------------------------------------------------------ 307 (445)
T ss_dssp ----CSSEEEEEE--TTSCEEEEETT------------------------------------------------------
T ss_pred ----CCCEEEEEe--CCCeEEEEECC------------------------------------------------------
Confidence 334455554 45556665522
Q ss_pred ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc
Q psy10063 721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL 800 (894)
Q Consensus 721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~ 800 (894)
. ++....+.+|...+.++.+ ++.+|++++.||.|++||++.++.+..+..
T Consensus 308 ---------------------~-------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 357 (445)
T 2ovr_B 308 ---------------------T-------GNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQG 357 (445)
T ss_dssp ---------------------T-------CCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECS
T ss_pred ---------------------C-------CCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEcc
Confidence 1 1111234456677777776 467999999999999999998887766543
Q ss_pred ----CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec-----cCCCCCeeEEEEeeCCcEEEEecCCCc---
Q psy10063 801 ----SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI-----KGHFGPINSLAFHPDGKSYASGGEDGF--- 868 (894)
Q Consensus 801 ----~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l-----~gH~~~V~~l~fSpdg~~LaS~s~Dg~--- 868 (894)
.....++..++.++++++.++ .|+|||+..++++..+ .+|.+.|.+|+|+|++.+|++|+.||.
T Consensus 358 ~~~~~~~v~~~~~~~~~l~s~~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~ 433 (445)
T 2ovr_B 358 PNKHQSAVTCLQFNKNFVITSSDDG----TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEET 433 (445)
T ss_dssp TTSCSSCEEEEEECSSEEEEEETTS----EEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCC
T ss_pred CCCCCCCEEEEEECCCEEEEEeCCC----eEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCcc
Confidence 122334566789999999887 6999999999998887 578899999999999999999999998
Q ss_pred -EEEEecCcc
Q psy10063 869 -VRLHTFDQA 877 (894)
Q Consensus 869 -V~vWdl~~~ 877 (894)
|.|||++..
T Consensus 434 ~l~v~df~~~ 443 (445)
T 2ovr_B 434 KLLVLDFDVD 443 (445)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEECCCC
Confidence 999999864
No 52
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7e-33 Score=306.73 Aligned_cols=268 Identities=14% Similarity=0.074 Sum_probs=213.2
Q ss_pred ceeeeeccCccEEEecCCCeEE------E---------------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecC
Q psy10063 381 DRLNSMSPAARKLATNAEPVVK------M---------------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLR 439 (894)
Q Consensus 381 ~~~~~~s~dg~~l~~~~~~~~~------~---------------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~ 439 (894)
...++|++||++|+.+++..++ . ....|...|.+|+|+|++ +|++|+.||.|+|||+.
T Consensus 33 v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~ 111 (344)
T 4gqb_B 33 LEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVELWELD 111 (344)
T ss_dssp EEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEecc
Confidence 4567899999999877642211 1 122356789999999985 68899999999999999
Q ss_pred CCeEEEE----ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe
Q psy10063 440 MGRELES----ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT 515 (894)
Q Consensus 440 tg~~~~~----l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~ 515 (894)
+++.+.. +.+|.+ .|.+|+|+|+|++|++|+.|+.|+|||++++++++.+.
T Consensus 112 ~~~~~~~~~~~~~~H~~-------------------------~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~ 166 (344)
T 4gqb_B 112 ENETLIVSKFCKYEHDD-------------------------IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR 166 (344)
T ss_dssp TTSSCEEEEEEEECCSS-------------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCceeEeeccccCCCC-------------------------CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 8876443 347776 78899999999999999999999999999999999998
Q ss_pred C-CCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc--CCCCCeEEEEEecC-CCEEEE
Q psy10063 516 T-ERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK--GHFGPINSLAFHPD-GKSYAS 590 (894)
Q Consensus 516 ~-~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~--~h~~~V~~l~~spd-g~~l~s 590 (894)
+ ...|.+++|++++. +|++++.|+. |++||++.++.+..+. .|...+.+++|+|+ +++|++
T Consensus 167 ~h~~~V~~~~~~~~~~~~l~s~s~D~~--------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~s 232 (344)
T 4gqb_B 167 AHAAQVTCVAASPHKDSVFLSCSEDNR--------------ILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVF 232 (344)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSC--------------EEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEE
T ss_pred CcCCceEEEEecCCCCCceeeeccccc--------------cccccccccceeeeeecceeeccceeeeecCCCCcceEE
Confidence 4 68999999999985 6788888887 8999999999888774 45667999999985 568899
Q ss_pred EeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHH
Q psy10063 591 GGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEM 670 (894)
Q Consensus 591 gs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~ 670 (894)
|+.||.|+|||++.++.+
T Consensus 233 g~~dg~v~~wd~~~~~~~-------------------------------------------------------------- 250 (344)
T 4gqb_B 233 GDENGTVSLVDTKSTSCV-------------------------------------------------------------- 250 (344)
T ss_dssp EETTSEEEEEESCC--CC--------------------------------------------------------------
T ss_pred eccCCcEEEEECCCCcEE--------------------------------------------------------------
Confidence 999999999998654211
Q ss_pred hhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCC
Q psy10063 671 ARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDG 750 (894)
Q Consensus 671 ~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg 750 (894)
T Consensus 251 -------------------------------------------------------------------------------- 250 (344)
T 4gqb_B 251 -------------------------------------------------------------------------------- 250 (344)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcceecCCCCceEEEeeCCCC-CEEEEecCCCcEEEEEccCCceee--ccccCCCceEeecCCCeE-EEEecCCCCcee
Q psy10063 751 SDTPILAGPVDIGFKMPEPPKR-EKLALALADKVSERYRDRKNKATA--GFLLSCPDFLFDFDTTRE-VTTTSTKVGKFD 826 (894)
Q Consensus 751 ~~~~~~~~h~~~v~~la~spdg-~~Latgs~Dg~I~iwd~~~~~~~~--~~~~~~~~~~fS~dg~~l-~~as~d~~g~~~ 826 (894)
..+.+|...|.+|+|+|++ .+||+|+.|+.|+|||+..++++. .+...+..++|+|++..+ ++++.|+ .
T Consensus 251 ---~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~----~ 323 (344)
T 4gqb_B 251 ---LSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDH----Q 323 (344)
T ss_dssp ---EEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTS----C
T ss_pred ---EEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCC----e
Confidence 1234577889999999997 579999999999999998887643 344456678899999865 4677777 5
Q ss_pred EEEeecCCcce
Q psy10063 827 ARFYHLIFEEE 837 (894)
Q Consensus 827 I~vwd~~tg~~ 837 (894)
|++|++....+
T Consensus 324 v~~w~v~~~~~ 334 (344)
T 4gqb_B 324 VVHHVVPTEPL 334 (344)
T ss_dssp EEEEECCC---
T ss_pred EEEEECCCCCC
Confidence 99999986543
No 53
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-34 Score=332.90 Aligned_cols=323 Identities=13% Similarity=0.074 Sum_probs=215.7
Q ss_pred CCCCEEEEEEccCC---------CEEEE-------------------ecCCCcEEEEecCCCeEE----EEecCCCCCCe
Q psy10063 408 QSAKITSLLWGNLD---------QYIIT-------------------GHAKGDICTWDLRMGREL----ESISGHAKEPI 455 (894)
Q Consensus 408 H~~~V~~l~~spdg---------~~L~s-------------------gs~Dg~I~iWd~~tg~~~----~~l~~h~~~~V 455 (894)
+.+.|.+|+|+|++ ++||+ ++.|+.|+|||+..+++. ..+.+|.+ .|
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~-~V 210 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG-EV 210 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCC-SE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCC-cE
Confidence 56778888888775 55655 557889999999877642 34555655 45
Q ss_pred eEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE-----------EEEEe-CCCCeeEE
Q psy10063 456 NDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQL-----------LKTYT-TERPVNSA 523 (894)
Q Consensus 456 ~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~-----------~~~~~-~~~~v~~l 523 (894)
.+|+|+|++. +++++.+||+++.||.|+|||+..+++ ...+. |...|.++
T Consensus 211 ~~v~wsp~~~------------------~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv 272 (524)
T 2j04_B 211 WDLKWHEGCH------------------APHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTF 272 (524)
T ss_dssp EEEEECSSCC------------------CSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEE
T ss_pred EEEEECCCCC------------------CCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEE
Confidence 5555554320 123468999999999999999987642 12444 45789999
Q ss_pred EEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc-eEEEccCCCCCeEEE--EEecCC-CEEEEEeCCCcEEE
Q psy10063 524 ALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE-EFARIKGHFGPINSL--AFHPDG-KSYASGGEDGFLIS 599 (894)
Q Consensus 524 ~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~-~~~~l~~h~~~V~~l--~~spdg-~~l~sgs~Dg~I~v 599 (894)
+|+++ .+|++|+.|+. |++||++.+. .+..+.+|...|.+| +|+++| .+|++|+.||.|+|
T Consensus 273 ~~s~~-~~lasgs~Dgt--------------V~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvkl 337 (524)
T 2j04_B 273 DFLSP-TTVVCGFKNGF--------------VAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYI 337 (524)
T ss_dssp EESSS-SEEEEEETTSE--------------EEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEE
T ss_pred EecCC-CeEEEEeCCCE--------------EEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEE
Confidence 99986 48999999997 8999998763 455688999999999 578888 89999999999999
Q ss_pred EECCCCccccC----C--CceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhh
Q psy10063 600 NTLSNGLDISE----G--SFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARN 673 (894)
Q Consensus 600 wdl~~~~~~~~----~--~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~ 673 (894)
||++.++.+.. . ..+..++|+|++..+ ++++ .+..|++|+..
T Consensus 338 WD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l-----------------------~s~~--~d~tv~lwd~~------- 385 (524)
T 2j04_B 338 FNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY-----------------------IYSD--GASSLRAVPSR------- 385 (524)
T ss_dssp ECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE-----------------------EEEC--SSSEEEEEETT-------
T ss_pred EECCCCCcccccccccccCcccceEeCCCcCeE-----------------------EEeC--CCCcEEEEECc-------
Confidence 99987653210 0 123445555544333 2222 33445554411
Q ss_pred cccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCc
Q psy10063 674 RMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDT 753 (894)
Q Consensus 674 ~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~ 753 (894)
. +...
T Consensus 386 --------------------------------------------------------------------~-------~~~~ 390 (524)
T 2j04_B 386 --------------------------------------------------------------------A-------AFAV 390 (524)
T ss_dssp --------------------------------------------------------------------C-------TTCC
T ss_pred --------------------------------------------------------------------c-------cccc
Confidence 1 1122
Q ss_pred ceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc--------CCCceEeecCCCeEEEEecCCCCce
Q psy10063 754 PILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL--------SCPDFLFDFDTTREVTTTSTKVGKF 825 (894)
Q Consensus 754 ~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~--------~~~~~~fS~dg~~l~~as~d~~g~~ 825 (894)
..+.+|.+.|.+|+|+|++.+||+|+.|+.|+||++... .+..+.. .+..++|+++|..+.. .+.
T Consensus 391 ~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~--~~~---- 463 (524)
T 2j04_B 391 HPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYRI--DSS---- 463 (524)
T ss_dssp EEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEEE--CCC----
T ss_pred eeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEEc--cCC----
Confidence 345679999999999999999999999999999997653 2222211 1235678999884422 221
Q ss_pred eEEEeecC-CcceeeeccCCCCCeeEEEEeeCCc---EEEEecCCCcEEEEecCcccc
Q psy10063 826 DARFYHLI-FEEEFARIKGHFGPINSLAFHPDGK---SYASGGEDGFVRLHTFDQAYF 879 (894)
Q Consensus 826 ~I~vwd~~-tg~~l~~l~gH~~~V~~l~fSpdg~---~LaS~s~Dg~V~vWdl~~~~~ 879 (894)
+++|+.. .++++..+.+|...|.+|+|+|++. +||+|+.||.||||+++....
T Consensus 464 -~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~~ 520 (524)
T 2j04_B 464 -YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEHH 520 (524)
T ss_dssp -CCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC--
T ss_pred -ceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccccc
Confidence 3445443 5778888999999999999999964 999999999999999986644
No 54
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-32 Score=309.32 Aligned_cols=281 Identities=19% Similarity=0.214 Sum_probs=226.3
Q ss_pred CccceeeeeccCccEEEecCCCeEEE----------EEecCC------------------CCEEEEEEccCCCEEEEecC
Q psy10063 378 LSVDRLNSMSPAARKLATNAEPVVKM----------QVTDQS------------------AKITSLLWGNLDQYIITGHA 429 (894)
Q Consensus 378 ~~~~~~~~~s~dg~~l~~~~~~~~~~----------~l~~H~------------------~~V~~l~~spdg~~L~sgs~ 429 (894)
......++|+|||++|+.+....+++ .+.+|. ..|.+++|+|||++|++|+.
T Consensus 64 ~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~ 143 (393)
T 1erj_A 64 TSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE 143 (393)
T ss_dssp SSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEET
T ss_pred CCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcC
Confidence 34456678999999999876543332 343443 24999999999999999999
Q ss_pred CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCc
Q psy10063 430 KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQ 509 (894)
Q Consensus 430 Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~ 509 (894)
|+.|+|||+.+++.+..+.+|.. .|.+++|+|++++|++++.|+.|+|||+++++
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h~~-------------------------~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGHEQ-------------------------DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCCSS-------------------------CEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred CCeEEEEECCCCcEEEEEccCCC-------------------------CEEEEEEcCCCCEEEEecCCCcEEEEECCCCe
Confidence 99999999999999999999988 78889999999999999999999999999999
Q ss_pred EEEEEeCCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc-------cCCCCCeEEEEE
Q psy10063 510 LLKTYTTERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI-------KGHFGPINSLAF 581 (894)
Q Consensus 510 ~~~~~~~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l-------~~h~~~V~~l~~ 581 (894)
++..+.++..+.+++|+| ++++|++++.++. |++||++.++.+..+ .+|...|.+++|
T Consensus 199 ~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~--------------v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 264 (393)
T 1erj_A 199 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRA--------------VRVWDSETGFLVERLDSENESGTGHKDSVYSVVF 264 (393)
T ss_dssp EEEEEECSSCEEEEEECSTTCCEEEEEETTSC--------------EEEEETTTCCEEEEEC------CCCSSCEEEEEE
T ss_pred eEEEEEcCCCcEEEEEECCCCCEEEEEcCCCc--------------EEEEECCCCcEEEeecccccCCCCCCCCEEEEEE
Confidence 999999989999999999 8999999999997 888998888877766 579999999999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceE
Q psy10063 582 HPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVE 661 (894)
Q Consensus 582 spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~ 661 (894)
+|+|++|++|+.||.|++||++........ ..
T Consensus 265 ~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~-------------------------~~----------------------- 296 (393)
T 1erj_A 265 TRDGQSVVSGSLDRSVKLWNLQNANNKSDS-------------------------KT----------------------- 296 (393)
T ss_dssp CTTSSEEEEEETTSEEEEEEC-----------------------------------------------------------
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCCCcccc-------------------------cC-----------------------
Confidence 999999999999999999998653211000 00
Q ss_pred EechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccc
Q psy10063 662 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHI 741 (894)
Q Consensus 662 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~ 741 (894)
T Consensus 297 -------------------------------------------------------------------------------- 296 (393)
T 1erj_A 297 -------------------------------------------------------------------------------- 296 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc---ccCCCceEeec------CCC
Q psy10063 742 EGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF---LLSCPDFLFDF------DTT 812 (894)
Q Consensus 742 ~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~---~~~~~~~~fS~------dg~ 812 (894)
...+.....+.+|.+.|.+++|++++.+|++|+.|+.|++||+..++.+..+ ...+..++|++ ++.
T Consensus 297 -----~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~ 371 (393)
T 1erj_A 297 -----PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYN 371 (393)
T ss_dssp ---------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCE
T ss_pred -----CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCC
Confidence 0000011134568888999999999999999999999999999988875543 33344566654 788
Q ss_pred eEEEEecCCCCceeEEEeecCC
Q psy10063 813 REVTTTSTKVGKFDARFYHLIF 834 (894)
Q Consensus 813 ~l~~as~d~~g~~~I~vwd~~t 834 (894)
++++++.|+ .|+||+++.
T Consensus 372 ~l~sgs~Dg----~i~iW~~~~ 389 (393)
T 1erj_A 372 VFATGSGDC----KARIWKYKK 389 (393)
T ss_dssp EEEEEETTS----EEEEEEEEE
T ss_pred EEEEECCCC----cEEECcccc
Confidence 899999988 699999864
No 55
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.9e-32 Score=335.92 Aligned_cols=399 Identities=15% Similarity=0.167 Sum_probs=298.2
Q ss_pred CCccceeeeeccCccEEEecCCC-----------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC-eEE
Q psy10063 377 PLSVDRLNSMSPAARKLATNAEP-----------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG-REL 444 (894)
Q Consensus 377 ~~~~~~~~~~s~dg~~l~~~~~~-----------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg-~~~ 444 (894)
+......++|+++|++|+.++.+ .....+.+|.+.|.+++|+|++++|++|+.||.|+|||+..+ ...
T Consensus 54 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~ 133 (814)
T 3mkq_A 54 TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE 133 (814)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEE
T ss_pred CCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEE
Confidence 33455677899999988877543 233367789999999999999999999999999999999987 778
Q ss_pred EEecCCCCCCeeEEEEcC-CCCEEEEEeCCCCc-------------------cceEEEEEec--CCCEEEEEECCCCEEE
Q psy10063 445 ESISGHAKEPINDMQFSK-DATMFITASHSQAV-------------------EPINDMQFSK--DATMFITASKDHTAKL 502 (894)
Q Consensus 445 ~~l~~h~~~~V~~v~~sp-dg~~la~~~~d~~i-------------------~~V~~l~~sp--dg~~L~sgs~Dg~V~i 502 (894)
..+.+|.. .|.+++|+| ++.+|++++.++.+ ..|.+++|+| ++.+|++++.||.|++
T Consensus 134 ~~~~~~~~-~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~ 212 (814)
T 3mkq_A 134 QTFEGHEH-FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI 212 (814)
T ss_dssp EEEECCSS-CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEE
T ss_pred EEEcCCCC-cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEE
Confidence 88889988 999999999 89999999998866 4788999999 9999999999999999
Q ss_pred EEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEE
Q psy10063 503 FTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF 581 (894)
Q Consensus 503 wdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~ 581 (894)
||++.++++..+. |...|.+++|+|++++|++++.++. |++||+..++.+..+..|...|.+++|
T Consensus 213 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------v~vwd~~~~~~~~~~~~~~~~v~~~~~ 278 (814)
T 3mkq_A 213 WDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT--------------LKIWNSSTYKVEKTLNVGLERSWCIAT 278 (814)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC--------------EEEEETTTCSEEEEECCSSSSEEEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe--------------EEEEECCCCcEEEEeecCCCcEEEEEE
Confidence 9999999999888 4688999999999999999999997 899999999999999999999999999
Q ss_pred ecCCCE-EEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCe-----EEEEecccCCCCCCCeeeecccc
Q psy10063 582 HPDGKS-YASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGH-----IHSLSSHSTSSTDTGGVFSGSRV 655 (894)
Q Consensus 582 spdg~~-l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~-----i~~~~~~~~~~~d~~~i~sgs~~ 655 (894)
+|+|.. +++++.++.+.+|++.... ..+.++|+|..+...... +........
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------------- 336 (814)
T 3mkq_A 279 HPTGRKNYIASGFDNGFTVLSLGNDE--------PTLSLDPVGKLVWSGGKNAAASDIFTAVIRGN-------------- 336 (814)
T ss_dssp CTTCGGGEEEEEETTEEEEEECSCCS--------CCEEECSSSEEEEECCTTSCTTCEEEEECCSC--------------
T ss_pred ccCCCceEEEEEeCCCEEEEEcCCCC--------ceeEECCCCCEEEECcccccceeeeeeecccc--------------
Confidence 999873 2444456778999886543 246677777766432211 000000000
Q ss_pred CCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcc
Q psy10063 656 DDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPL 735 (894)
Q Consensus 656 ~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l 735 (894)
|.. ..+.... .....+ .........+.++++|..+++.. ++ .+
T Consensus 337 -------~~~-------------~~~~~~~------~~~~~~---~~~~~~~~~~~~spdg~~la~~~-~~-------~~ 379 (814)
T 3mkq_A 337 -------EEV-------------EQDEPLS------LQTKEL---GSVDVFPQSLAHSPNGRFVTVVG-DG-------EY 379 (814)
T ss_dssp -------CCC-------------CSSSCBC------CCCEEE---CCCSSCCSEEEECTTSSEEEEEE-TT-------EE
T ss_pred -------ccc-------------ccCccce------eeeecC---CCCccCCceeEECCCCCEEEEec-CC-------EE
Confidence 000 0000000 000000 00111123467788888777754 22 23
Q ss_pred eeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCC---C
Q psy10063 736 MTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDT---T 812 (894)
Q Consensus 736 ~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg---~ 812 (894)
.+|.... ....+.+.+.+++|+|++++||+++.++.|++|+.. ..+...+..+.|+++| .
T Consensus 380 ~i~~~~~------------~~~~~~~~i~~~~~spdg~~la~~~~~g~v~l~~~~-----~~~~~~v~~~~~s~dg~~~~ 442 (814)
T 3mkq_A 380 VIYTALA------------WRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYKNF-----KEVTSWSVPMHSAIDRLFSG 442 (814)
T ss_dssp EEEETTT------------TEEEEEEECSEEEECTTSSCEEEECTTCCEEEEETT-----EECTTCCCCCSSCCCEEECS
T ss_pred EEEECcc------------ccccCCCceEEEEEeCCCCeEEEEeCCCcEEEEECC-----CCccceEEcCCcCccceecc
Confidence 4443110 111234567799999999999999999999999633 2333445677799998 6
Q ss_pred eEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEe------cCCCcEEEEe
Q psy10063 813 REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG------GEDGFVRLHT 873 (894)
Q Consensus 813 ~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~------s~Dg~V~vWd 873 (894)
++++++.++ .|++||+.+++++..+.+|.. .++|+|||++|+++ +.|+.+.+|-
T Consensus 443 ~l~~~~~d~----~v~~~d~~~~~~~~~~~~~~~---~v~~s~dg~~la~~~~~~~~~~~~~~~~~~ 502 (814)
T 3mkq_A 443 ALLGVKSDG----FVYFFDWDNGTLVRRIDVNAK---DVIWSDNGELVMIVNTNSNGDEASGYTLLF 502 (814)
T ss_dssp SSEEEEETT----EEEEECTTTCCEEEEESSCEE---EEEECTTSSEEEEEECCCSSCSCSEEEEEE
T ss_pred eEEEEecCC----EEEEEECCcCcEEEEEecCCC---EEEEcCCCCEEEEEEcCcccCCceEEEEEe
Confidence 888887776 699999999999999998875 89999999999999 6666555553
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.7e-31 Score=307.78 Aligned_cols=302 Identities=18% Similarity=0.177 Sum_probs=250.7
Q ss_pred eEEEEEecCCCCE-EEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc--
Q psy10063 400 VVKMQVTDQSAKI-TSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-- 476 (894)
Q Consensus 400 ~~~~~l~~H~~~V-~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-- 476 (894)
.....+.+|...| .++.| ++++|++|+.||.|+|||+.+++.+..+.+|.+ .|.+++|++++ +|++++.|+.+
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~-~V~~l~~~~~~-~l~s~s~dg~i~v 187 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDG-GVWALKYAHGG-ILVSGSTDRTVRV 187 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECSTT-EEEEEETTSCEEE
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCc-CEEEEEEcCCC-EEEEEeCCCCEEE
Confidence 3556788999885 55555 678999999999999999999999999999998 99999999988 99999999887
Q ss_pred ----------------cceEEEEEe--cCCCEEEEEECCCCEEEEEcCCCcEE-----------------------EEEe
Q psy10063 477 ----------------EPINDMQFS--KDATMFITASKDHTAKLFTTHDRQLL-----------------------KTYT 515 (894)
Q Consensus 477 ----------------~~V~~l~~s--pdg~~L~sgs~Dg~V~iwdl~~~~~~-----------------------~~~~ 515 (894)
..|.+++|+ +++.+|++|+.||.|++||++.++.+ ..+.
T Consensus 188 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 188 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred EECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 588999998 57899999999999999999877632 2333
Q ss_pred -CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC
Q psy10063 516 -TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED 594 (894)
Q Consensus 516 -~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D 594 (894)
+...+.++ ++++.+|++++.++. |++||+..++.+..+.+|...|.+++|++++++|++|+.|
T Consensus 268 ~~~~~v~~~--~~~~~~l~~~~~d~~--------------i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d 331 (464)
T 3v7d_B 268 GHMASVRTV--SGHGNIVVSGSYDNT--------------LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD 331 (464)
T ss_dssp CCSSCEEEE--EEETTEEEEEETTSC--------------EEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred CccceEEEE--cCCCCEEEEEeCCCe--------------EEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 23555555 678999999999997 8999999999999999999999999999999999999999
Q ss_pred CcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhc
Q psy10063 595 GFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNR 674 (894)
Q Consensus 595 g~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~ 674 (894)
|.|++||++.++.+
T Consensus 332 g~i~vwd~~~~~~~------------------------------------------------------------------ 345 (464)
T 3v7d_B 332 TTIRIWDLENGELM------------------------------------------------------------------ 345 (464)
T ss_dssp SCEEEEETTTTEEE------------------------------------------------------------------
T ss_pred CcEEEEECCCCcEE------------------------------------------------------------------
Confidence 99999998654211
Q ss_pred ccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcc
Q psy10063 675 MSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTP 754 (894)
Q Consensus 675 ~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~ 754 (894)
.
T Consensus 346 -------------------------------------------------------------------------------~ 346 (464)
T 3v7d_B 346 -------------------------------------------------------------------------------Y 346 (464)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------E
Confidence 0
Q ss_pred eecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc--cCCCceEeecCCCeEEEEecCCCCceeEEEeec
Q psy10063 755 ILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHL 832 (894)
Q Consensus 755 ~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~ 832 (894)
.+.+|...|.+++++ +.+|++++.||.|++||+...+...... .....++|++++.++++++ ++ .|+|||+
T Consensus 347 ~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg----~i~iwd~ 419 (464)
T 3v7d_B 347 TLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-EN----QFNIYNL 419 (464)
T ss_dssp EECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TT----EEEEEET
T ss_pred EEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CC----eEEEEEC
Confidence 123466678888887 5899999999999999999877655443 3345678999999999887 44 5999999
Q ss_pred CCcceeee-ccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063 833 IFEEEFAR-IKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTF 874 (894)
Q Consensus 833 ~tg~~l~~-l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl 874 (894)
++++++.. +.+|.+.|.+|+|+ +..++++++.||.+.+|-+
T Consensus 420 ~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 420 RSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp TTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred CCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEEe
Confidence 99999986 77899999999997 4556666777876665544
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=9.3e-33 Score=302.64 Aligned_cols=289 Identities=14% Similarity=0.072 Sum_probs=240.9
Q ss_pred cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063 407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK 486 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp 486 (894)
-|.+.|.+++|+|||++|+++..++.+.+|............+|.. .|.+++|+|
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-------------------------~v~~~~~~~ 61 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGE-------------------------VVCAVTISN 61 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSS-------------------------CCCEEEECS
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCC-------------------------ceEEEEEec
Confidence 3567899999999999999998888788877665555555557877 788888999
Q ss_pred CCCEEEEEECCCCEEEEEcCCCcE---EEEE---eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063 487 DATMFITASKDHTAKLFTTHDRQL---LKTY---TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL 560 (894)
Q Consensus 487 dg~~L~sgs~Dg~V~iwdl~~~~~---~~~~---~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~ 560 (894)
++++|++++ ||.|+|||+..++. +..+ .+...|.+++|+|++++|++++.++. |++||+
T Consensus 62 ~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~~~d~ 126 (337)
T 1gxr_A 62 PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST--------------LSIWDL 126 (337)
T ss_dssp SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE--------------EEEEEC
T ss_pred CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCc--------------EEEEEC
Confidence 999999998 99999999987653 3333 35688999999999999999999886 888998
Q ss_pred cccc--eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEec
Q psy10063 561 IFEE--EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSS 638 (894)
Q Consensus 561 ~~~~--~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~ 638 (894)
..++ ....+.+|...|.+++|++++++|++++.||.|++||++.++.+
T Consensus 127 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~------------------------------ 176 (337)
T 1gxr_A 127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV------------------------------ 176 (337)
T ss_dssp CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE------------------------------
T ss_pred CCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCcee------------------------------
Confidence 8776 56677889999999999999999999999999999998653210
Q ss_pred ccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCE
Q psy10063 639 HSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTR 718 (894)
Q Consensus 639 ~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~ 718 (894)
T Consensus 177 -------------------------------------------------------------------------------- 176 (337)
T 1gxr_A 177 -------------------------------------------------------------------------------- 176 (337)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc
Q psy10063 719 LHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF 798 (894)
Q Consensus 719 l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~ 798 (894)
..+.+|...|.+++|+|++++|++++.|+.|++||++.++.+..+
T Consensus 177 -----------------------------------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 221 (337)
T 1gxr_A 177 -----------------------------------RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH 221 (337)
T ss_dssp -----------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred -----------------------------------eeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee
Confidence 012235667889999999999999999999999999988876554
Q ss_pred c--cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063 799 L--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ 876 (894)
Q Consensus 799 ~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~ 876 (894)
. ..+..++|+++++++++++.++ .|++||+..++.. .+.+|...|.+++|+|++++|++++.||.|+||+++.
T Consensus 222 ~~~~~v~~~~~s~~~~~l~~~~~~~----~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 222 DFTSQIFSLGYCPTGEWLAVGMESS----NVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTS----CEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cCCCceEEEEECCCCCEEEEEcCCC----cEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 3 3455778999999999998877 5999999987754 6789999999999999999999999999999999998
Q ss_pred ccccccccc
Q psy10063 877 AYFDYTFDI 885 (894)
Q Consensus 877 ~~~~~~~~~ 885 (894)
++.+..+..
T Consensus 297 ~~~~~~~~~ 305 (337)
T 1gxr_A 297 GASIFQSKE 305 (337)
T ss_dssp CCEEEEEEC
T ss_pred CeEEEEecC
Confidence 887755443
No 58
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2e-32 Score=296.54 Aligned_cols=255 Identities=13% Similarity=0.191 Sum_probs=206.0
Q ss_pred EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC--CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063 403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM--GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN 480 (894)
Q Consensus 403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t--g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~ 480 (894)
+.+.+|.+.|.+++|+|+|++||+|+.|+.|+|||+.. ++++..|.+|.+ .|.
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~-------------------------~V~ 57 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEG-------------------------PVW 57 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSS-------------------------CEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccC-------------------------CeE
Confidence 46789999999999999999999999999999999974 467889999988 677
Q ss_pred EEEEec--CCCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCeeEEEEcCC--CCEEEEEECCCCeEEEeccCcccee
Q psy10063 481 DMQFSK--DATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVNSAALSPI--LPHVVLGGGQEAREVTTTSTKVGKF 553 (894)
Q Consensus 481 ~l~~sp--dg~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~~l~~spd--g~~l~~~~~~~~~~v~~~~~~~~~~ 553 (894)
+|+|++ ++++|++|+.|+.|+|||++.++ .+..+. |...|.+++|+|+ |.+|++++.++.
T Consensus 58 ~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~------------- 124 (297)
T 2pm7_B 58 RVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGK------------- 124 (297)
T ss_dssp EEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSE-------------
T ss_pred EEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCc-------------
Confidence 788865 48899999999999999999874 445555 5688999999998 899999999997
Q ss_pred eEEEEeccccc--eEEEccCCCCCeEEEEEecC-------------CCEEEEEeCCCcEEEEECCCCccccCCCceeeeE
Q psy10063 554 DARFYHLIFEE--EFARIKGHFGPINSLAFHPD-------------GKSYASGGEDGFLISNTLSNGLDISEGSFTSSST 618 (894)
Q Consensus 554 ~v~vwd~~~~~--~~~~l~~h~~~V~~l~~spd-------------g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~ 618 (894)
|++||++.+. ....+.+|...|.+++|+|+ +++|++|+.|+.|+|||++.++...
T Consensus 125 -v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~--------- 194 (297)
T 2pm7_B 125 -VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY--------- 194 (297)
T ss_dssp -EEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEE---------
T ss_pred -EEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceE---------
Confidence 7888887653 24567899999999999997 5799999999999999975432000
Q ss_pred ECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEec
Q psy10063 619 QQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELT 698 (894)
Q Consensus 619 ~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s 698 (894)
.
T Consensus 195 ----------------~--------------------------------------------------------------- 195 (297)
T 2pm7_B 195 ----------------V--------------------------------------------------------------- 195 (297)
T ss_dssp ----------------E---------------------------------------------------------------
T ss_pred ----------------E---------------------------------------------------------------
Confidence 0
Q ss_pred cCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCC---CEE
Q psy10063 699 KDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKR---EKL 775 (894)
Q Consensus 699 ~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg---~~L 775 (894)
....+.+|.+.|.+++|+|++ .+|
T Consensus 196 -----------------------------------------------------~~~~l~~H~~~V~~v~~sp~~~~~~~l 222 (297)
T 2pm7_B 196 -----------------------------------------------------LESTLEGHSDWVRDVAWSPTVLLRSYM 222 (297)
T ss_dssp -----------------------------------------------------EEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred -----------------------------------------------------EEEEecCCCCceEEEEECCCCCCceEE
Confidence 001245688899999999994 899
Q ss_pred EEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee
Q psy10063 776 ALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP 855 (894)
Q Consensus 776 atgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp 855 (894)
|+++.|+.|+||++....... ... +....+|...|.+++|+|
T Consensus 223 as~s~D~~v~iWd~~~~~~~~-----------------------------~~~---------~~~~~~~~~~v~~~~~s~ 264 (297)
T 2pm7_B 223 ASVSQDRTCIIWTQDNEQGPW-----------------------------KKT---------LLKEEKFPDVLWRASWSL 264 (297)
T ss_dssp EEEETTSCEEEEEESSTTSCC-----------------------------EEE---------ESSSSCCSSCEEEEEECS
T ss_pred EEEECCCcEEEEEeCCCCCcc-----------------------------cee---------eeecccCCCcEEEEEECC
Confidence 999999999999865421000 000 111246788999999999
Q ss_pred CCcEEEEecCCCcEEEEecC
Q psy10063 856 DGKSYASGGEDGFVRLHTFD 875 (894)
Q Consensus 856 dg~~LaS~s~Dg~V~vWdl~ 875 (894)
+|++||+++.||.|+||++.
T Consensus 265 ~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 265 SGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SSCCEEEEETTSCEEEEEEC
T ss_pred CCCEEEEEcCCCcEEEEEEC
Confidence 99999999999999999986
No 59
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-32 Score=300.11 Aligned_cols=289 Identities=14% Similarity=0.200 Sum_probs=219.4
Q ss_pred cceeeeeccCccEEEecCCC-eEEE-------------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC--eE
Q psy10063 380 VDRLNSMSPAARKLATNAEP-VVKM-------------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG--RE 443 (894)
Q Consensus 380 ~~~~~~~s~dg~~l~~~~~~-~~~~-------------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg--~~ 443 (894)
....++|+|||++|+.++.+ .+++ .+.+|.+.|.+|+|+|+|++|++|+.|+.|+|||+..+ ++
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence 45677899999999877543 2222 23589999999999999999999999999999999876 45
Q ss_pred EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCc---EEEEEe-CCCC
Q psy10063 444 LESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQ---LLKTYT-TERP 519 (894)
Q Consensus 444 ~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~---~~~~~~-~~~~ 519 (894)
+..+.+|.. .|.+|+|+|++++|++|+.|+.|+|||++.++ ++..+. |...
T Consensus 98 ~~~~~~h~~-------------------------~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~ 152 (345)
T 3fm0_A 98 VTTLEGHEN-------------------------EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQD 152 (345)
T ss_dssp EEEECCCSS-------------------------CEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSC
T ss_pred EEEccCCCC-------------------------CceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCC
Confidence 788889987 78889999999999999999999999998764 344454 4678
Q ss_pred eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc--eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy10063 520 VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE--EFARIKGHFGPINSLAFHPDGKSYASGGEDGFL 597 (894)
Q Consensus 520 v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~--~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I 597 (894)
|.+++|+|++++|++++.++. |++||++.++ ++..+.+|...|.+|+|+|+|++|++|+.||.|
T Consensus 153 v~~~~~~p~~~~l~s~s~d~~--------------i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v 218 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYDDT--------------VKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTV 218 (345)
T ss_dssp EEEEEECSSSSCEEEEETTSC--------------EEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eEEEEECCCCCEEEEEeCCCc--------------EEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeE
Confidence 999999999999999999997 7888887764 456788999999999999999999999999999
Q ss_pred EEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccc
Q psy10063 598 ISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSI 677 (894)
Q Consensus 598 ~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~ 677 (894)
+||++........ ....+. +..
T Consensus 219 ~iW~~~~~~~~~~-------------------------------------~~~~~~---~~~------------------ 240 (345)
T 3fm0_A 219 RIWRQYLPGNEQG-------------------------------------VACSGS---DPS------------------ 240 (345)
T ss_dssp EEEEEECTTCTTC-------------------------------------CCCC------CE------------------
T ss_pred EEeccccCCCCcc-------------------------------------ceeecc---CCc------------------
Confidence 9998632210000 000000 000
Q ss_pred cCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCccee-
Q psy10063 678 NHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPIL- 756 (894)
Q Consensus 678 ~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~- 756 (894)
...+..+
T Consensus 241 ------------------------------------------------------------------------~~~~~~~~ 248 (345)
T 3fm0_A 241 ------------------------------------------------------------------------WKCICTLS 248 (345)
T ss_dssp ------------------------------------------------------------------------EEEEEEEC
T ss_pred ------------------------------------------------------------------------cceeEEec
Confidence 0000011
Q ss_pred cCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce-------e-----eccccCCCceEeecCCC-eEEEEecCCCC
Q psy10063 757 AGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA-------T-----AGFLLSCPDFLFDFDTT-REVTTTSTKVG 823 (894)
Q Consensus 757 ~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~-------~-----~~~~~~~~~~~fS~dg~-~l~~as~d~~g 823 (894)
..|...|++++|++++.+|++++.|+.|++|+...... + ..+...+..++|+|++. .|++++.|+
T Consensus 249 ~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg-- 326 (345)
T 3fm0_A 249 GFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDG-- 326 (345)
T ss_dssp SSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTS--
T ss_pred CCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCC--
Confidence 23677899999999999999999999999999765421 1 12334556788999985 788888887
Q ss_pred ceeEEEeecCCcceeeec
Q psy10063 824 KFDARFYHLIFEEEFARI 841 (894)
Q Consensus 824 ~~~I~vwd~~tg~~l~~l 841 (894)
.|+||++..++.+..+
T Consensus 327 --~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 327 --EVAFWKYQRPEGLHHH 342 (345)
T ss_dssp --CEEEEEECC-------
T ss_pred --cEEEEEecCCCCcccc
Confidence 5999999988766544
No 60
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.9e-31 Score=292.02 Aligned_cols=242 Identities=20% Similarity=0.260 Sum_probs=204.3
Q ss_pred EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063 403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM 482 (894)
Q Consensus 403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l 482 (894)
..+.+|...|.+++|+|+|++|++|+.|+.|+|||+.++++++.+.+|.. .|.++
T Consensus 59 ~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~-------------------------~v~~~ 113 (319)
T 3frx_A 59 RSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKS-------------------------DVMSV 113 (319)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-------------------------CEEEE
T ss_pred eEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCC-------------------------cEEEE
Confidence 35789999999999999999999999999999999999999999999988 78888
Q ss_pred EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCC------CCEEEEEECCCCeEEEeccCccceeeE
Q psy10063 483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPI------LPHVVLGGGQEAREVTTTSTKVGKFDA 555 (894)
Q Consensus 483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spd------g~~l~~~~~~~~~~v~~~~~~~~~~~v 555 (894)
+|+|++.+|++|+.|+.|+|||++.. ++..+. |...|.+++|+|. +.+|++++.++. |
T Consensus 114 ~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~--------------i 178 (319)
T 3frx_A 114 DIDKKASMIISGSRDKTIKVWTIKGQ-CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM--------------V 178 (319)
T ss_dssp EECTTSCEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECCC------CCEEEEEETTSC--------------E
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCE--------------E
Confidence 89999999999999999999999754 454444 5688999999985 458999999997 8
Q ss_pred EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063 556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS 635 (894)
Q Consensus 556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~ 635 (894)
++||+..++.+..+.+|...|.+++|+|+|++|++|+.||.|+|||+..++.+.
T Consensus 179 ~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~-------------------------- 232 (319)
T 3frx_A 179 KAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY-------------------------- 232 (319)
T ss_dssp EEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE--------------------------
T ss_pred EEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE--------------------------
Confidence 999999999999999999999999999999999999999999999986542110
Q ss_pred EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063 636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS 715 (894)
Q Consensus 636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~ 715 (894)
T Consensus 233 -------------------------------------------------------------------------------- 232 (319)
T 3frx_A 233 -------------------------------------------------------------------------------- 232 (319)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063 716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT 795 (894)
Q Consensus 716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~ 795 (894)
.+. +...|.+++|+|++.+|++++.++ |++|++.....+
T Consensus 233 ---------------------------------------~~~-~~~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~ 271 (319)
T 3frx_A 233 ---------------------------------------TLS-AQDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLV 271 (319)
T ss_dssp ---------------------------------------EEE-CCSCEEEEEECSSSSEEEEEETTE-EEEEEETTEEEE
T ss_pred ---------------------------------------Eec-CCCcEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeee
Confidence 000 123578899999999999887665 999998876554
Q ss_pred eccc-----------cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCc
Q psy10063 796 AGFL-----------LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE 835 (894)
Q Consensus 796 ~~~~-----------~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg 835 (894)
..+. ..+..++|+|||++|++++.|+ .|+|||+.++
T Consensus 272 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg----~i~vWd~~t~ 318 (319)
T 3frx_A 272 DDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDN----VIRVWQVMTA 318 (319)
T ss_dssp EEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTS----CEEEEEEEEC
T ss_pred eccCccccccccCcCcceeEEEECCCCCEEEEeecCc----eEEEEEEeec
Confidence 3321 1233678999999999999998 5999998764
No 61
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.7e-31 Score=295.12 Aligned_cols=268 Identities=17% Similarity=0.175 Sum_probs=224.1
Q ss_pred CCccceeeeeccCccEEEecCCC-eEE----------EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC----
Q psy10063 377 PLSVDRLNSMSPAARKLATNAEP-VVK----------MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG---- 441 (894)
Q Consensus 377 ~~~~~~~~~~s~dg~~l~~~~~~-~~~----------~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg---- 441 (894)
+......++|++||++|+.++.+ .++ ..+..|...|.+++|+|+|++|++|+.|+.|+||++..+
T Consensus 54 H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~ 133 (340)
T 1got_B 54 HLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNV 133 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSC
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcc
Confidence 34455667899999998877654 232 356789999999999999999999999999999999875
Q ss_pred eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCe
Q psy10063 442 RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPV 520 (894)
Q Consensus 442 ~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v 520 (894)
+....+.+|.+ .|.+++|++++. |++++.|+.|+|||+++++++..+.. ...|
T Consensus 134 ~~~~~~~~h~~-------------------------~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v 187 (340)
T 1got_B 134 RVSRELAGHTG-------------------------YLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187 (340)
T ss_dssp EEEEEEECCSS-------------------------CEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred eeEEEecCCCc-------------------------cEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCce
Confidence 45667778877 678888887765 88999999999999999999998874 5889
Q ss_pred eEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q psy10063 521 NSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISN 600 (894)
Q Consensus 521 ~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vw 600 (894)
.+++|+|++++|++++.++. |++||++.++++..+.+|...|.+++|+|++++|++|+.||.|++|
T Consensus 188 ~~~~~~~~~~~l~sg~~d~~--------------v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iw 253 (340)
T 1got_B 188 MSLSLAPDTRLFVSGACDAS--------------AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF 253 (340)
T ss_dssp EEEEECTTSSEEEEEETTSC--------------EEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEECCCCCEEEEEeCCCc--------------EEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 99999999999999999997 8999999999999999999999999999999999999999999999
Q ss_pred ECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCC
Q psy10063 601 TLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHS 680 (894)
Q Consensus 601 dl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~ 680 (894)
|++.++.+. .+.
T Consensus 254 d~~~~~~~~-------------------------~~~------------------------------------------- 265 (340)
T 1got_B 254 DLRADQELM-------------------------TYS------------------------------------------- 265 (340)
T ss_dssp ETTTTEEEE-------------------------EEC-------------------------------------------
T ss_pred ECCCCcEEE-------------------------EEc-------------------------------------------
Confidence 986542110 000
Q ss_pred CCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCC
Q psy10063 681 GTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPV 760 (894)
Q Consensus 681 g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~ 760 (894)
...+.
T Consensus 266 ---------------------------------------------------------------------------~~~~~ 270 (340)
T 1got_B 266 ---------------------------------------------------------------------------HDNII 270 (340)
T ss_dssp ---------------------------------------------------------------------------CTTCC
T ss_pred ---------------------------------------------------------------------------cCCcc
Confidence 00122
Q ss_pred CceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee---ccccCCCceEeecCCCeEEEEecCCCCceeEEEee
Q psy10063 761 DIGFKMPEPPKREKLALALADKVSERYRDRKNKATA---GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYH 831 (894)
Q Consensus 761 ~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd 831 (894)
..|.+++|+|++++|++|+.|+.|++||+...+.+. .+...+..++|+++|.+|++++.|+ .|+|||
T Consensus 271 ~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~----~i~iWd 340 (340)
T 1got_B 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS----FLKIWN 340 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTS----CEEEEC
T ss_pred cceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCc----cEEecC
Confidence 357899999999999999999999999998877644 3444556788999999999999998 599997
No 62
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8.7e-33 Score=302.33 Aligned_cols=256 Identities=15% Similarity=0.140 Sum_probs=195.8
Q ss_pred eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe--EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063 400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR--ELESISGHAKEPINDMQFSKDATMFITASHSQAVE 477 (894)
Q Consensus 400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~--~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~ 477 (894)
.+...+.+|.+.|.+|+|+|+|++||+|+.|+.|+|||+..++ ++..+.+|.+
T Consensus 4 ~~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~------------------------- 58 (316)
T 3bg1_A 4 VINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEG------------------------- 58 (316)
T ss_dssp ----------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSS-------------------------
T ss_pred eeeeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCc-------------------------
Confidence 3455778999999999999999999999999999999998875 4678889988
Q ss_pred ceEEEEEec--CCCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCeeEEEEcCC--CCEEEEEECCCCeEEEeccCcc
Q psy10063 478 PINDMQFSK--DATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVNSAALSPI--LPHVVLGGGQEAREVTTTSTKV 550 (894)
Q Consensus 478 ~V~~l~~sp--dg~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~~l~~spd--g~~l~~~~~~~~~~v~~~~~~~ 550 (894)
.|.+|+|++ ++++|++|+.|+.|+|||++.++ .+..+. |...|.+++|+|+ |.+|++++.++.
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~---------- 128 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA---------- 128 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC----------
T ss_pred cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC----------
Confidence 677888865 48899999999999999999874 455555 5678999999998 789999999997
Q ss_pred ceeeEEEEeccccce---EEEccCCCCCeEEEEEecC-----------------CCEEEEEeCCCcEEEEECCCCccccC
Q psy10063 551 GKFDARFYHLIFEEE---FARIKGHFGPINSLAFHPD-----------------GKSYASGGEDGFLISNTLSNGLDISE 610 (894)
Q Consensus 551 ~~~~v~vwd~~~~~~---~~~l~~h~~~V~~l~~spd-----------------g~~l~sgs~Dg~I~vwdl~~~~~~~~ 610 (894)
|++||+..+.. ...+.+|...|.+++|+|+ +++|++|+.|+.|+|||++.....
T Consensus 129 ----i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~-- 202 (316)
T 3bg1_A 129 ----ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW-- 202 (316)
T ss_dssp ----EEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE--
T ss_pred ----EEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc--
Confidence 78888776532 3456789999999999997 356777777777777776321100
Q ss_pred CCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccC
Q psy10063 611 GSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFD 690 (894)
Q Consensus 611 ~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 690 (894)
T Consensus 203 -------------------------------------------------------------------------------- 202 (316)
T 3bg1_A 203 -------------------------------------------------------------------------------- 202 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC
Q psy10063 691 EQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP 770 (894)
Q Consensus 691 ~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp 770 (894)
.....+.+|.+.|.+++|+|
T Consensus 203 ------------------------------------------------------------~~~~~l~~h~~~V~~v~~sp 222 (316)
T 3bg1_A 203 ------------------------------------------------------------KEEQKLEAHSDWVRDVAWAP 222 (316)
T ss_dssp ------------------------------------------------------------EEEECCBCCSSCEEEEECCC
T ss_pred ------------------------------------------------------------ceeeecccCCCceEEEEecC
Confidence 00012356888999999999
Q ss_pred CC----CEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCC
Q psy10063 771 KR----EKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG 846 (894)
Q Consensus 771 dg----~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~ 846 (894)
++ .+||+++.|+.|+||++...... ......+.+|.+
T Consensus 223 ~~~~~~~~las~s~D~~v~iw~~~~~~~~---------------------------------------~~~~~~~~~~~~ 263 (316)
T 3bg1_A 223 SIGLPTSTIASCSQDGRVFIWTCDDASSN---------------------------------------TWSPKLLHKFND 263 (316)
T ss_dssp CSSCSCCEEEEEETTCEEEEEECSSTTCC---------------------------------------CCBCCEEEECSS
T ss_pred CCCCCCceEEEEcCCCeEEEEEccCcccc---------------------------------------chhhhhhhcCCC
Confidence 86 88999999999999986542100 000112346788
Q ss_pred CeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063 847 PINSLAFHPDGKSYASGGEDGFVRLHTFD 875 (894)
Q Consensus 847 ~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~ 875 (894)
.|.+|+|+|+|++||+++.||.|+||++.
T Consensus 264 ~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 264 VVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99999999999999999999999999986
No 63
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=8.1e-32 Score=308.31 Aligned_cols=302 Identities=12% Similarity=0.200 Sum_probs=223.7
Q ss_pred cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe-----------EEEEecCCCCC--CeeEEEEcCCCCEEEEEeCC
Q psy10063 407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR-----------ELESISGHAKE--PINDMQFSKDATMFITASHS 473 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~-----------~~~~l~~h~~~--~V~~v~~spdg~~la~~~~d 473 (894)
.|.+.|.+|+|+|+|++||+|+.||.|+|||+..++ ++..+.+|... .+..+.+.
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~------------ 93 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIE------------ 93 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEEC------------
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccccccccccccc------------
Confidence 367999999999999999999999999999999877 47777777620 00000000
Q ss_pred CCccceEEEEEecCC--CEEEEEECCCCEEEEEcCCCcEE---------------------------------------E
Q psy10063 474 QAVEPINDMQFSKDA--TMFITASKDHTAKLFTTHDRQLL---------------------------------------K 512 (894)
Q Consensus 474 ~~i~~V~~l~~spdg--~~L~sgs~Dg~V~iwdl~~~~~~---------------------------------------~ 512 (894)
..|.+|+|+|++ .+|++++.|+.|+|||+..++.. +
T Consensus 94 ---~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
T 3dw8_B 94 ---EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRR 170 (447)
T ss_dssp ---CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred ---CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceE
Confidence 168888899887 79999999999999998764432 1
Q ss_pred EE--eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-cceEE-------EccCCCCCeEEEEEe
Q psy10063 513 TY--TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF-EEEFA-------RIKGHFGPINSLAFH 582 (894)
Q Consensus 513 ~~--~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~-~~~~~-------~l~~h~~~V~~l~~s 582 (894)
.+ .|...|.+++|+|++++|+++ .++. |++||+.. ++.+. .+.+|...|.+++|+
T Consensus 171 ~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~--------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (447)
T 3dw8_B 171 IFANAHTYHINSISINSDYETYLSA-DDLR--------------INLWHLEITDRSFNIVDIKPANMEELTEVITAAEFH 235 (447)
T ss_dssp EECSCCSSCCCEEEECTTSSEEEEE-CSSE--------------EEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEEC
T ss_pred EeccCCCcceEEEEEcCCCCEEEEe-CCCe--------------EEEEECCCCCceeeeeecccccccccCcceEEEEEC
Confidence 22 256889999999999999998 6776 78888873 34443 367899999999999
Q ss_pred cCC-CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceE
Q psy10063 583 PDG-KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVE 661 (894)
Q Consensus 583 pdg-~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~ 661 (894)
|++ .+|++|+.||.|++||++.++.... .+..+..+.
T Consensus 236 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~---------------------~~~~~~~~~--------------------- 273 (447)
T 3dw8_B 236 PNSCNTFVYSSSKGTIRLCDMRASALCDR---------------------HSKLFEEPE--------------------- 273 (447)
T ss_dssp SSCTTEEEEEETTSCEEEEETTTCSSSCT---------------------TCEEECCC----------------------
T ss_pred CCCCcEEEEEeCCCeEEEEECcCCccccc---------------------eeeEeccCC---------------------
Confidence 998 9999999999999999976542100 000000000
Q ss_pred EechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccc
Q psy10063 662 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHI 741 (894)
Q Consensus 662 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~ 741 (894)
T Consensus 274 -------------------------------------------------------------------------------- 273 (447)
T 3dw8_B 274 -------------------------------------------------------------------------------- 273 (447)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC-CceeeccccC------------------C
Q psy10063 742 EGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK-NKATAGFLLS------------------C 802 (894)
Q Consensus 742 ~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~-~~~~~~~~~~------------------~ 802 (894)
+......+.+|...|.+++|+|++++|++++. +.|+|||++. ++.+..+... .
T Consensus 274 -------~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~ 345 (447)
T 3dw8_B 274 -------DPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDK 345 (447)
T ss_dssp -----------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCC
T ss_pred -------CccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccc
Confidence 00000123346678999999999999999999 9999999986 5544333221 1
Q ss_pred CceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc---------------------------------CCCCCee
Q psy10063 803 PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK---------------------------------GHFGPIN 849 (894)
Q Consensus 803 ~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~---------------------------------gH~~~V~ 849 (894)
..++|++++++|++++.++ .|+|||+..++.+. +. .+...|.
T Consensus 346 ~~~~~s~~~~~l~s~s~dg----~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 420 (447)
T 3dw8_B 346 FECCWNGSDSVVMTGSYNN----FFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKIL 420 (447)
T ss_dssp CCEEECTTSSEEEEECSTT----EEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCC
T ss_pred eEEEECCCCCEEEEeccCC----EEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccccccCCcee
Confidence 1289999999999999887 69999999887653 22 2345789
Q ss_pred EEEEeeCCcEEEEecCCCcEEEEec
Q psy10063 850 SLAFHPDGKSYASGGEDGFVRLHTF 874 (894)
Q Consensus 850 ~l~fSpdg~~LaS~s~Dg~V~vWdl 874 (894)
+++|+|++.+||+++.++ ++||.-
T Consensus 421 ~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 421 HTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp EEEECSSSSEEEEECSSC-EEEEEC
T ss_pred EEEECCCCCEEEEEecce-eeeecc
Confidence 999999999999998887 777764
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-33 Score=314.49 Aligned_cols=291 Identities=13% Similarity=0.178 Sum_probs=236.6
Q ss_pred CCCCEEEEEEccCCC-EEEEe----------cCCCcEEEEecCCCeE---EEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063 408 QSAKITSLLWGNLDQ-YIITG----------HAKGDICTWDLRMGRE---LESISGHAKEPINDMQFSKDATMFITASHS 473 (894)
Q Consensus 408 H~~~V~~l~~spdg~-~L~sg----------s~Dg~I~iWd~~tg~~---~~~l~~h~~~~V~~v~~spdg~~la~~~~d 473 (894)
+...|.+++|+|+|+ +|++| +.|+.|+|||+..++. +..+ .|..
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~--------------------- 68 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDS--------------------- 68 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSS---------------------
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCC---------------------
Confidence 445789999999997 99999 8899999999998753 3333 3444
Q ss_pred CCccceEEEEEecCCCEEEEEECCCCEEEEEcCC----CcEEEEEe-CCCCeeEEEEcCC-CCEEEEEECCCCeEEEecc
Q psy10063 474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHD----RQLLKTYT-TERPVNSAALSPI-LPHVVLGGGQEAREVTTTS 547 (894)
Q Consensus 474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~----~~~~~~~~-~~~~v~~l~~spd-g~~l~~~~~~~~~~v~~~~ 547 (894)
.|.+++|+|++++|++++.||.|+|||+.. .+++..+. |...|.+++|+|+ +.+|++++.++.
T Consensus 69 ----~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~------- 137 (416)
T 2pm9_A 69 ----KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGE------- 137 (416)
T ss_dssp ----CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSC-------
T ss_pred ----ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCe-------
Confidence 688999999999999999999999999987 34666665 5689999999998 899999999987
Q ss_pred CccceeeEEEEeccccc------eEE---EccCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCCccccCCCceeee
Q psy10063 548 TKVGKFDARFYHLIFEE------EFA---RIKGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLSNGLDISEGSFTSSS 617 (894)
Q Consensus 548 ~~~~~~~v~vwd~~~~~------~~~---~l~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~ 617 (894)
|++||+..++ ... .+.+|...|.+++|+++ +.+|++++.||.|++||++.++.+.
T Consensus 138 -------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~-------- 202 (416)
T 2pm9_A 138 -------IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI-------- 202 (416)
T ss_dssp -------EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE--------
T ss_pred -------EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce--------
Confidence 7888887765 322 34679999999999999 7899999999999999997643110
Q ss_pred EECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEe
Q psy10063 618 TQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVEL 697 (894)
Q Consensus 618 ~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 697 (894)
.+...
T Consensus 203 -----------------~~~~~---------------------------------------------------------- 207 (416)
T 2pm9_A 203 -----------------HLSYT---------------------------------------------------------- 207 (416)
T ss_dssp -----------------EECCC----------------------------------------------------------
T ss_pred -----------------EEecc----------------------------------------------------------
Confidence 00000
Q ss_pred ccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCC-CEEE
Q psy10063 698 TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKR-EKLA 776 (894)
Q Consensus 698 s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg-~~La 776 (894)
....+|...|.+++|+|++ .+|+
T Consensus 208 --------------------------------------------------------~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 208 --------------------------------------------------------SPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp --------------------------------------------------------CCSSCCCCCEEEEEECSSCTTEEE
T ss_pred --------------------------------------------------------ccccccCCceEEEEECCCCCCEEE
Confidence 0012356778999999997 6899
Q ss_pred EecCCC---cEEEEEccCCc-eeec----cccCCCceEeec-CCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCC
Q psy10063 777 LALADK---VSERYRDRKNK-ATAG----FLLSCPDFLFDF-DTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP 847 (894)
Q Consensus 777 tgs~Dg---~I~iwd~~~~~-~~~~----~~~~~~~~~fS~-dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~ 847 (894)
+++.|+ .|++||++... .+.. +...+..++|++ ++.++++++.++ .|+|||++.++++..+.+|...
T Consensus 232 ~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg----~v~~wd~~~~~~~~~~~~~~~~ 307 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN----TVLLWNPESAEQLSQFPARGNW 307 (416)
T ss_dssp EEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS----EEEEECSSSCCEEEEEECSSSC
T ss_pred EEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC----CEEEeeCCCCccceeecCCCCc
Confidence 999998 99999998863 3322 334455788999 899999999887 6999999999999999999999
Q ss_pred eeEEEEeeCC-cEEEEecCCCcEEEEecCcccccc
Q psy10063 848 INSLAFHPDG-KSYASGGEDGFVRLHTFDQAYFDY 881 (894)
Q Consensus 848 V~~l~fSpdg-~~LaS~s~Dg~V~vWdl~~~~~~~ 881 (894)
|.+|+|+|++ ++|++++.||.|+||++.......
T Consensus 308 v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 308 CFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp CCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred eEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence 9999999999 899999999999999998776443
No 65
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.9e-32 Score=299.28 Aligned_cols=269 Identities=15% Similarity=0.120 Sum_probs=209.6
Q ss_pred ccceeeeeccCccEEEecCCC-------eEEE--------------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy10063 379 SVDRLNSMSPAARKLATNAEP-------VVKM--------------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWD 437 (894)
Q Consensus 379 ~~~~~~~~s~dg~~l~~~~~~-------~~~~--------------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd 437 (894)
.....++|||||++|+.++.+ .+.+ ...+|...|.+|+|+|++++| +++.||.|+|||
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~dg~v~lWd 121 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDSGAVELWE 121 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETTSCEEEC-
T ss_pred CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECCCEEEEee
Confidence 345667899999999987642 1221 334689999999999998655 567799999999
Q ss_pred cCCCeEEE----EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE
Q psy10063 438 LRMGRELE----SISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT 513 (894)
Q Consensus 438 ~~tg~~~~----~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~ 513 (894)
+.+++.+. .+.+|.. .|.+|+|+|+|++|++|+.|+.|+|||+++++++..
T Consensus 122 ~~~~~~~~~~~~~~~~h~~-------------------------~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~ 176 (357)
T 4g56_B 122 ILEKESLLVNKFAKYEHDD-------------------------IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKS 176 (357)
T ss_dssp -------CCCCEEECCCSS-------------------------CEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ccccceeEEEeeccCCCCC-------------------------CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 99887543 2335665 789999999999999999999999999999999999
Q ss_pred EeC-CCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc--cCCCCCeEEEEEecC-CCEE
Q psy10063 514 YTT-ERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI--KGHFGPINSLAFHPD-GKSY 588 (894)
Q Consensus 514 ~~~-~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l--~~h~~~V~~l~~spd-g~~l 588 (894)
+.. ...|.+++|++++. +|++++.++. |++||++.++++..+ ..|...|.+++|+|+ +.+|
T Consensus 177 ~~~h~~~v~~v~~s~~~~~~~~s~~~dg~--------------v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l 242 (357)
T 4g56_B 177 YNAHSSEVNCVAACPGKDTIFLSCGEDGR--------------ILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTF 242 (357)
T ss_dssp ECCCSSCEEEEEECTTCSSCEEEEETTSC--------------EEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEE
T ss_pred EcCCCCCEEEEEEccCCCceeeeeccCCc--------------eEEEECCCCceeeeeeeccccccccchhhhhcccceE
Confidence 885 68899999999986 6788888887 899999988877655 356778999999997 4688
Q ss_pred EEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhH
Q psy10063 589 ASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQI 668 (894)
Q Consensus 589 ~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~ 668 (894)
++|+.|+.|++||++.++.+
T Consensus 243 a~g~~d~~i~~wd~~~~~~~------------------------------------------------------------ 262 (357)
T 4g56_B 243 ACGDETGNVSLVNIKNPDSA------------------------------------------------------------ 262 (357)
T ss_dssp EEEESSSCEEEEESSCGGGC------------------------------------------------------------
T ss_pred EEeecccceeEEECCCCcEe------------------------------------------------------------
Confidence 99999999999998653211
Q ss_pred HHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCccccc
Q psy10063 669 EMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKL 748 (894)
Q Consensus 669 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~ 748 (894)
T Consensus 263 -------------------------------------------------------------------------------- 262 (357)
T 4g56_B 263 -------------------------------------------------------------------------------- 262 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcceecCCCCceEEEeeCCCC-CEEEEecCCCcEEEEEccCCceeec--cccCCCceEeec-CCCeEEEEecCCCCc
Q psy10063 749 DGSDTPILAGPVDIGFKMPEPPKR-EKLALALADKVSERYRDRKNKATAG--FLLSCPDFLFDF-DTTREVTTTSTKVGK 824 (894)
Q Consensus 749 dg~~~~~~~~h~~~v~~la~spdg-~~Latgs~Dg~I~iwd~~~~~~~~~--~~~~~~~~~fS~-dg~~l~~as~d~~g~ 824 (894)
..+.+|...|.+|+|+|++ ++||+|+.|+.|+|||++.++.+.. +...+..++|+| |+.+|++++.|+
T Consensus 263 -----~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg--- 334 (357)
T 4g56_B 263 -----QTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDH--- 334 (357)
T ss_dssp -----EEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTS---
T ss_pred -----EEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCC---
Confidence 1234567778999999987 5799999999999999998877543 334556788998 899999999988
Q ss_pred eeEEEeecCCcc
Q psy10063 825 FDARFYHLIFEE 836 (894)
Q Consensus 825 ~~I~vwd~~tg~ 836 (894)
.|+||++....
T Consensus 335 -~v~iW~~~~~~ 345 (357)
T 4g56_B 335 -KVLHHHLPSEG 345 (357)
T ss_dssp -CEEEEECC---
T ss_pred -eEEEEECCCCC
Confidence 59999997543
No 66
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-32 Score=313.55 Aligned_cols=304 Identities=14% Similarity=0.114 Sum_probs=228.8
Q ss_pred EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCE----EEEEeCC-----C
Q psy10063 404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATM----FITASHS-----Q 474 (894)
Q Consensus 404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~----la~~~~d-----~ 474 (894)
.-++-...|.+|+|||||++||+++.|++|+ |...++ .+.+|.. .|++|+|+|+|.. +-.+... .
T Consensus 10 ~~~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh~~-~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~ 83 (588)
T 2j04_A 10 DRKEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCNSK-NLFHVKEFPLEFENKLDFELAQQNGLLNSQ 83 (588)
T ss_dssp CSCCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSBGG-GTEEEEEECCCCCCTTTTSCCCSSCSSTTS
T ss_pred cHhHhhccEEEEEECCCCCEEEEEcCCceee--cccccc---eecCCCc-cEEEEEECCCCCcceEEEEeCCCceEeecC
Confidence 3445678999999999999999999999999 755554 4478988 9999999999821 0000000 0
Q ss_pred CccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCC-----CeeEEEEcCCCCEEEEEECCCCeEEEeccCc
Q psy10063 475 AVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER-----PVNSAALSPILPHVVLGGGQEAREVTTTSTK 549 (894)
Q Consensus 475 ~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~-----~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~ 549 (894)
....|.+++|+|||++||+++.||.|+|||.+. ++..+.++. .|.+++|||||++|++|+.|+.
T Consensus 84 ~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGt--------- 152 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGE--------- 152 (588)
T ss_dssp CSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSE---------
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCE---------
Confidence 015799999999999999999999999999544 666666433 4999999999999999999997
Q ss_pred cceeeEEEEeccccce-------EEEc----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc--------cC
Q psy10063 550 VGKFDARFYHLIFEEE-------FARI----KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI--------SE 610 (894)
Q Consensus 550 ~~~~~v~vwd~~~~~~-------~~~l----~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~--------~~ 610 (894)
|++||+..+.. +..+ .+|..+|.+++|+||| |++++.|+.|++|++..++.. .+
T Consensus 153 -----VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h 225 (588)
T 2j04_A 153 -----LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNAS 225 (588)
T ss_dssp -----EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCC
T ss_pred -----EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccc
Confidence 88899887753 5665 6788999999999999 888999999999999876521 01
Q ss_pred CCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccC
Q psy10063 611 GSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFD 690 (894)
Q Consensus 611 ~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 690 (894)
...+.+++|+ | ..+++++ ++.|++|+..
T Consensus 226 ~~~V~svaFs--g-----------------------~~LASa~---~~tIkLWd~~------------------------ 253 (588)
T 2j04_A 226 RRKITDLKIV--D-----------------------YKVVLTC---PGYVHKIDLK------------------------ 253 (588)
T ss_dssp SSCCCCEEEE--T-----------------------TEEEEEC---SSEEEEEETT------------------------
T ss_pred cCcEEEEEEE--C-----------------------CEEEEEe---CCeEEEEECC------------------------
Confidence 1223333332 1 2233332 2445554411
Q ss_pred CcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCc-ceecCCCCceEEEee-
Q psy10063 691 EQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDT-PILAGPVDIGFKMPE- 768 (894)
Q Consensus 691 ~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~-~~~~~h~~~v~~la~- 768 (894)
+... ....+|.+.|..|+|
T Consensus 254 -----------------------------------------------------------~~~~~~~~~gh~~~V~~va~~ 274 (588)
T 2j04_A 254 -----------------------------------------------------------NYSISSLKTGSLENFHIIPLN 274 (588)
T ss_dssp -----------------------------------------------------------TTEEEEEECSCCSCCCEEEET
T ss_pred -----------------------------------------------------------CCeEEEEEcCCCceEEEEEee
Confidence 1111 122378899999999
Q ss_pred -CCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCC
Q psy10063 769 -PPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP 847 (894)
Q Consensus 769 -spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~ 847 (894)
+|++..|++++.||. ++|... .+.|++|+..++.+ ++ .|++|+...+. +..+++ ...
T Consensus 275 ~s~d~~~La~a~edG~-klw~~d-------------~~~~spd~~l~a~~--d~----~v~lW~~~g~~-l~~~~~-~~~ 332 (588)
T 2j04_A 275 HEKESTILLMSNKTSY-KVLLED-------------ELHVTADNIIAPYL--EK----KFKKWSTIWNE-FNNYET-TLV 332 (588)
T ss_dssp TCSSCEEEEECSSCEE-EEEESS-------------SEEEECCCSSHHHH--HH----HHHHTTTTTTS-SSSSCC-EEE
T ss_pred eCCCCCEEEEEcCCCC-EEEeec-------------cEEECCCceEEEEc--CC----EEEEEECCCCc-eeeecc-ceE
Confidence 999999999999999 999876 36699999988874 44 58999986544 555555 778
Q ss_pred eeEEEEeeCCcEEEEec
Q psy10063 848 INSLAFHPDGKSYASGG 864 (894)
Q Consensus 848 V~~l~fSpdg~~LaS~s 864 (894)
|.+|+|||||+.||+++
T Consensus 333 I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 333 IHGISLSPDGYSIAIVY 349 (588)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred EEEEEECCCCCEEEEEE
Confidence 99999999999999886
No 67
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-31 Score=294.44 Aligned_cols=278 Identities=8% Similarity=-0.046 Sum_probs=232.3
Q ss_pred EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe---EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063 405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR---ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND 481 (894)
Q Consensus 405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~---~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~ 481 (894)
..+|.+.|.+++|+|++++|++|+.||.|+|||+..++ .+..+.+|.. .|.+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~-------------------------~v~~ 61 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH-------------------------PLLC 61 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSS-------------------------CEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCC-------------------------ceEE
Confidence 45899999999999999999999999999999998876 3444556766 7889
Q ss_pred EEEecCCC-EEEEEECCCCEEEEEc-CCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063 482 MQFSKDAT-MFITASKDHTAKLFTT-HDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF 557 (894)
Q Consensus 482 l~~spdg~-~L~sgs~Dg~V~iwdl-~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v 557 (894)
++|+|+++ +|++|+.||.|++||+ ..++...... |...|.+++|+| +.+|++++.++. |++
T Consensus 62 ~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~--------------i~i 126 (342)
T 1yfq_A 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGL--------------IEV 126 (342)
T ss_dssp EEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSE--------------EEE
T ss_pred EEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCe--------------EEE
Confidence 99999999 9999999999999999 8887755555 678999999999 999999999986 888
Q ss_pred Eeccc---------cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC-CccccCCCceeeeEECcCCcEEE
Q psy10063 558 YHLIF---------EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN-GLDISEGSFTSSSTQQPDGLVYP 627 (894)
Q Consensus 558 wd~~~---------~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~-~~~~~~~~~v~~~~~spdg~~l~ 627 (894)
||++. ++++..+. |...|.+++|++++ |++++.||.|++||++. +....
T Consensus 127 wd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~------------------ 185 (342)
T 1yfq_A 127 IDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNG------------------ 185 (342)
T ss_dssp ECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCC------------------
T ss_pred EcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccc------------------
Confidence 88887 77666666 88999999999887 99999999999999865 32100
Q ss_pred ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063 628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR 707 (894)
Q Consensus 628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~ 707 (894)
T Consensus 186 -------------------------------------------------------------------------------- 185 (342)
T 1yfq_A 186 -------------------------------------------------------------------------------- 185 (342)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC-CCCEEEEecCCCcEEE
Q psy10063 708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP-KREKLALALADKVSER 786 (894)
Q Consensus 708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp-dg~~Latgs~Dg~I~i 786 (894)
......|...+.+++|+| ++++|++++.||.|+|
T Consensus 186 ---------------------------------------------~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i 220 (342)
T 1yfq_A 186 ---------------------------------------------TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAV 220 (342)
T ss_dssp ---------------------------------------------EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEE
T ss_pred ---------------------------------------------eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEE
Confidence 001123455688999999 9999999999999999
Q ss_pred EEccCC------ceeec---ccc---------CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCC-CCC
Q psy10063 787 YRDRKN------KATAG---FLL---------SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGH-FGP 847 (894)
Q Consensus 787 wd~~~~------~~~~~---~~~---------~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH-~~~ 847 (894)
|+++.. +.+.. +.. .+..++|++++++|++++.++ .|+|||+..++++..+.+| ...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~h~~~ 296 (342)
T 1yfq_A 221 EFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG----IISCWNLQTRKKIKNFAKFNEDS 296 (342)
T ss_dssp EECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS----CEEEEETTTTEEEEECCCCSSSE
T ss_pred EEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc----eEEEEcCccHhHhhhhhcccCCC
Confidence 998765 33222 222 455778999999999999887 5999999999999999998 999
Q ss_pred eeEEEEeeCCcEEEEecCCCc-EEEEec
Q psy10063 848 INSLAFHPDGKSYASGGEDGF-VRLHTF 874 (894)
Q Consensus 848 V~~l~fSpdg~~LaS~s~Dg~-V~vWdl 874 (894)
|.+|+ +++++|++++.||. .+.|..
T Consensus 297 v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 297 VVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp EEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred ceEec--CCCCeEEEEecCCcccccccc
Confidence 99999 99999999999998 665554
No 68
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.1e-31 Score=295.40 Aligned_cols=285 Identities=15% Similarity=0.147 Sum_probs=229.4
Q ss_pred EEEEEecCCCCEEEEEEccC---CCEEEEecCCCcEEEEecCC-CeEE-EEecCCCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063 401 VKMQVTDQSAKITSLLWGNL---DQYIITGHAKGDICTWDLRM-GREL-ESISGHAKEPINDMQFSKDATMFITASHSQA 475 (894)
Q Consensus 401 ~~~~l~~H~~~V~~l~~spd---g~~L~sgs~Dg~I~iWd~~t-g~~~-~~l~~h~~~~V~~v~~spdg~~la~~~~d~~ 475 (894)
....+.+|.+.|.+|+|+|+ |++|++|+.||.|+|||+.. ++.+ ..+.+|..
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~----------------------- 87 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTG----------------------- 87 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSS-----------------------
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccC-----------------------
Confidence 34467899999999999999 69999999999999999997 5554 77888887
Q ss_pred ccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEE--cCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063 476 VEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAAL--SPILPHVVLGGGQEAREVTTTSTKVGKF 553 (894)
Q Consensus 476 i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~--spdg~~l~~~~~~~~~~v~~~~~~~~~~ 553 (894)
.|.+++|+|++++|++++.||.|+|||++.++++....|...|.+++| ++++.+|++++.++.
T Consensus 88 --~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~------------- 152 (368)
T 3mmy_A 88 --PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKT------------- 152 (368)
T ss_dssp --CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSE-------------
T ss_pred --CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCc-------------
Confidence 788999999999999999999999999999999998888999999999 999999999999996
Q ss_pred eEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeE
Q psy10063 554 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHI 633 (894)
Q Consensus 554 ~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i 633 (894)
|++||++.++.+..+..|. .+.++.+. +..+++++.++.+++|+++.....
T Consensus 153 -i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~------------------------- 203 (368)
T 3mmy_A 153 -LKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSE------------------------- 203 (368)
T ss_dssp -EEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEE-------------------------
T ss_pred -EEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccch-------------------------
Confidence 8999999999988887765 56666665 458888999999999998653210
Q ss_pred EEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEc
Q psy10063 634 HSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSIN 713 (894)
Q Consensus 634 ~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s 713 (894)
+...
T Consensus 204 --~~~~-------------------------------------------------------------------------- 207 (368)
T 3mmy_A 204 --FRRI-------------------------------------------------------------------------- 207 (368)
T ss_dssp --EEEC--------------------------------------------------------------------------
T ss_pred --hhhc--------------------------------------------------------------------------
Confidence 0000
Q ss_pred CCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC----EEEEecCCCcEEEEEc
Q psy10063 714 HSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE----KLALALADKVSERYRD 789 (894)
Q Consensus 714 ~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~----~Latgs~Dg~I~iwd~ 789 (894)
...+...+.++++.++.. .|++++.|+.|++|++
T Consensus 208 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 208 ------------------------------------------ESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp ------------------------------------------CCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEES
T ss_pred ------------------------------------------cccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEec
Confidence 000001112222222222 3999999999999999
Q ss_pred cCCce------eecccc------------CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEE
Q psy10063 790 RKNKA------TAGFLL------------SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSL 851 (894)
Q Consensus 790 ~~~~~------~~~~~~------------~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l 851 (894)
..... +..+.. .+..++|++++++|++++.++ .|+|||+..++++..+.+|...|.+|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~v~~~ 321 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG----RFSFWDKDARTKLKTSEQLDQPISAC 321 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS----CEEEEETTTTEEEEECCCCSSCEEEE
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC----eEEEEECCCCcEEEEecCCCCCceEE
Confidence 87632 222222 466788999999999999887 59999999999999999999999999
Q ss_pred EEeeCCcEEEEecCCCcEEEEec
Q psy10063 852 AFHPDGKSYASGGEDGFVRLHTF 874 (894)
Q Consensus 852 ~fSpdg~~LaS~s~Dg~V~vWdl 874 (894)
+|+|||++|++++.|+.++.|++
T Consensus 322 ~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 322 CFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp EECTTSSCEEEEECCCSTTCGGG
T ss_pred EECCCCCeEEEEecccccccccc
Confidence 99999999999999986666554
No 69
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-30 Score=288.73 Aligned_cols=161 Identities=21% Similarity=0.324 Sum_probs=142.9
Q ss_pred EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063 403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM 482 (894)
Q Consensus 403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l 482 (894)
..+.+|...|.+++|+|++.+|++|+.|+.|+|||+.++++++.+.+|.. .|.++
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~-------------------------~v~~v 124 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQS-------------------------EVYSV 124 (343)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCS-------------------------CEEEE
T ss_pred chhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC-------------------------cEEEE
Confidence 35789999999999999999999999999999999999999999999988 78889
Q ss_pred EEecCCCEEEEEECCCCEEEEEcCCCcEEEEE---eCCCCeeEEEEcCCC----------CEEEEEECCCCeEEEeccCc
Q psy10063 483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTY---TTERPVNSAALSPIL----------PHVVLGGGQEAREVTTTSTK 549 (894)
Q Consensus 483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~---~~~~~v~~l~~spdg----------~~l~~~~~~~~~~v~~~~~~ 549 (894)
+|+|++++|++++.|+.|+|||+......... .+...|.+++|+|++ .+|++++.++.
T Consensus 125 ~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~--------- 195 (343)
T 2xzm_R 125 AFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGR--------- 195 (343)
T ss_dssp EECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSE---------
T ss_pred EECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCE---------
Confidence 99999999999999999999999844333322 245789999999987 78999999987
Q ss_pred cceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063 550 VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS 603 (894)
Q Consensus 550 ~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~ 603 (894)
|++||. .++.+..+.+|...|.+++|+|+|++|++|+.||.|+|||+.
T Consensus 196 -----i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 196 -----LKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp -----EEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred -----EEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 888884 466777888999999999999999999999999999999984
No 70
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.2e-30 Score=284.09 Aligned_cols=245 Identities=14% Similarity=0.164 Sum_probs=212.5
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR 556 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~ 556 (894)
.|.+++|+|++++|++|+.||.|+|||+..++++..+.. ...|.+++|+|++++|++++.++. |+
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~--------------i~ 90 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKT--------------LK 90 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSE--------------EE
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCE--------------EE
Confidence 789999999999999999999999999999999888874 578999999999999999999986 89
Q ss_pred EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063 557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL 636 (894)
Q Consensus 557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~ 636 (894)
+||++.++++..+.+|...|.+++|+|++.+|++|+.||.|++||++.++.+
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---------------------------- 142 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL---------------------------- 142 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE----------------------------
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE----------------------------
Confidence 9999999999999999999999999999999999999999999998653210
Q ss_pred ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063 637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG 716 (894)
Q Consensus 637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g 716 (894)
T Consensus 143 -------------------------------------------------------------------------------- 142 (312)
T 4ery_A 143 -------------------------------------------------------------------------------- 142 (312)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee
Q psy10063 717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA 796 (894)
Q Consensus 717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~ 796 (894)
..+..|...|.+++|+|++.+|++++.|+.|++||++.++.+.
T Consensus 143 -------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 185 (312)
T 4ery_A 143 -------------------------------------KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 185 (312)
T ss_dssp -------------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred -------------------------------------EEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceee
Confidence 0122356678899999999999999999999999999888766
Q ss_pred ccccC----CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEE--EEe-eCCcEEEEecCCCcE
Q psy10063 797 GFLLS----CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSL--AFH-PDGKSYASGGEDGFV 869 (894)
Q Consensus 797 ~~~~~----~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l--~fS-pdg~~LaS~s~Dg~V 869 (894)
.+... +..++|+++++++++++.++ .|+|||+..++++..+.+|...+.++ .|+ +++++|++|+.||.|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i 261 (312)
T 4ery_A 186 TLIDDDNPPVSFVKFSPNGKYILAATLDN----TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 261 (312)
T ss_dssp EECCSSCCCEEEEEECTTSSEEEEEETTT----EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCE
T ss_pred EEeccCCCceEEEEECCCCCEEEEEcCCC----eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEE
Confidence 54432 34578999999999999887 69999999999999999998765433 344 678999999999999
Q ss_pred EEEecCcccccccccc
Q psy10063 870 RLHTFDQAYFDYTFDI 885 (894)
Q Consensus 870 ~vWdl~~~~~~~~~~~ 885 (894)
+||+++.++++..+..
T Consensus 262 ~vwd~~~~~~~~~~~~ 277 (312)
T 4ery_A 262 YIWNLQTKEIVQKLQG 277 (312)
T ss_dssp EEEETTTCCEEEEECC
T ss_pred EEEECCCchhhhhhhc
Confidence 9999999988777653
No 71
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-31 Score=296.64 Aligned_cols=314 Identities=15% Similarity=0.090 Sum_probs=220.4
Q ss_pred CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC-EEEEEECCCCEEEEEc----
Q psy10063 431 GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT-MFITASKDHTAKLFTT---- 505 (894)
Q Consensus 431 g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~-~L~sgs~Dg~V~iwdl---- 505 (894)
..+.+|++...........|.+ .|.+++|+|+|+ +|++|+.||.|+|||+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~-------------------------~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~ 79 (425)
T 1r5m_A 25 SIDSSDDLDGFVKILKEIVKLD-------------------------NIVSSTWNPLDESILAYGEKNSVARLARIVETD 79 (425)
T ss_dssp ---------CCCEECEEEEECS-------------------------CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC-
T ss_pred cccccccchhhhhheeeeeccC-------------------------ceEEEEECCCCCcEEEEecCCceEEEEEEeccc
Confidence 3456788765554444444545 788899999999 9999999999999999
Q ss_pred CCCc------EEEEEeC-----------CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063 506 HDRQ------LLKTYTT-----------ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR 568 (894)
Q Consensus 506 ~~~~------~~~~~~~-----------~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~ 568 (894)
..++ ....+.+ ...|.+++|+|++++|++++.++. |++|| ..++.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--------------i~i~~-~~~~~~~~ 144 (425)
T 1r5m_A 80 QEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGE--------------LRLWN-KTGALLNV 144 (425)
T ss_dssp -----CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSC--------------EEEEE-TTSCEEEE
T ss_pred CCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCe--------------EEEEe-CCCCeeee
Confidence 8888 4555554 348999999999999999999987 88888 66788888
Q ss_pred ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCe
Q psy10063 569 IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGG 648 (894)
Q Consensus 569 l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~ 648 (894)
+.+|...|.+++|+|++++|++++.||.|++||+..++.+.... .... ....+....
T Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~------~~~~---------~~~~~~~~~-------- 201 (425)
T 1r5m_A 145 LNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE------LKET---------GGSSINAEN-------- 201 (425)
T ss_dssp ECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC------CC----------------------------
T ss_pred ccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee------cccc---------Cccceeecc--------
Confidence 99999999999999999999999999999999998765331100 0000 000000000
Q ss_pred eeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccc
Q psy10063 649 VFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQ 728 (894)
Q Consensus 649 i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~ 728 (894)
..+ .+. .... +.+.+++. ++++..+
T Consensus 202 -~~~---------------------------~~~--------~~~~---------------~~~~~~~~-~~~~~~~--- 226 (425)
T 1r5m_A 202 -HSG---------------------------DGS--------LGVD---------------VEWVDDDK-FVIPGPK--- 226 (425)
T ss_dssp --------------------------------CC--------CBSC---------------CEEEETTE-EEEECGG---
T ss_pred -ccC---------------------------Ccc--------eeeE---------------EEEcCCCE-EEEEcCC---
Confidence 000 000 0000 11111111 1111111
Q ss_pred cccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc---ccCCCce
Q psy10063 729 SVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF---LLSCPDF 805 (894)
Q Consensus 729 ~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~---~~~~~~~ 805 (894)
..+.+|+... +.....+.+|...|.+++|+|++++|++++.|+.|++||+...+.+..+ ...+..+
T Consensus 227 ----g~i~~~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~ 295 (425)
T 1r5m_A 227 ----GAIFVYQITE-------KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSA 295 (425)
T ss_dssp ----GCEEEEETTC-------SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEE
T ss_pred ----CeEEEEEcCC-------CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEE
Confidence 1233443322 2233456678899999999999999999999999999999887765443 3445678
Q ss_pred EeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063 806 LFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY 878 (894)
Q Consensus 806 ~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~ 878 (894)
+|++++ ++++++.++ .|+|||+..++++..+.+|...|.+++|+|++++|++++.||.|+||++..+.
T Consensus 296 ~~~~~~-~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 296 SWVGDD-KVISCSMDG----SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEETTT-EEEEEETTS----EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EECCCC-EEEEEeCCC----cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 899999 888888877 69999999999999999999999999999999999999999999999998877
No 72
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.9e-30 Score=286.02 Aligned_cols=270 Identities=16% Similarity=0.151 Sum_probs=222.7
Q ss_pred CCCccceeeeeccCccEEEecCCC-eEEE----------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC---
Q psy10063 376 SPLSVDRLNSMSPAARKLATNAEP-VVKM----------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG--- 441 (894)
Q Consensus 376 ~~~~~~~~~~~s~dg~~l~~~~~~-~~~~----------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg--- 441 (894)
.+......++|++||++|+.++.+ .+++ .+..|...|.+++|+|+|.+|++|+.|+.|+||++...
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE 141 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc
Confidence 344455677899999999887654 2322 45678899999999999999999999999999998643
Q ss_pred ---eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-C
Q psy10063 442 ---RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-E 517 (894)
Q Consensus 442 ---~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~ 517 (894)
.....+.+|.. .|.+++|++++.+|++++.|+.|+|||+++++++..+.. .
T Consensus 142 ~~~~~~~~~~~h~~-------------------------~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~ 196 (354)
T 2pbi_B 142 NMAAKKKSVAMHTN-------------------------YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHG 196 (354)
T ss_dssp CSGGGCEEEEECSS-------------------------CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred cccccceeeeccCC-------------------------cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCC
Confidence 23455556665 788999999999999999999999999999999998885 5
Q ss_pred CCeeEEEEcC--CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063 518 RPVNSAALSP--ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG 595 (894)
Q Consensus 518 ~~v~~l~~sp--dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg 595 (894)
..|.+++|+| +|.+|++++.|+. |++||++.++++..+.+|...|.+++|+|++.+|++|+.|+
T Consensus 197 ~~v~~~~~~~~~~g~~l~sgs~Dg~--------------v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 262 (354)
T 2pbi_B 197 ADVLCLDLAPSETGNTFVSGGCDKK--------------AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDA 262 (354)
T ss_dssp SCEEEEEECCCSSCCEEEEEETTSC--------------EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCeEEEEEEeCCCCCEEEEEeCCCe--------------EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCC
Confidence 7899999987 5789999999997 89999999999999999999999999999999999999999
Q ss_pred cEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcc
Q psy10063 596 FLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRM 675 (894)
Q Consensus 596 ~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~ 675 (894)
.|++||++.++.+ ..+.
T Consensus 263 ~v~lwd~~~~~~~-------------------------~~~~-------------------------------------- 279 (354)
T 2pbi_B 263 TCRLYDLRADREV-------------------------AIYS-------------------------------------- 279 (354)
T ss_dssp CEEEEETTTTEEE-------------------------EEEC--------------------------------------
T ss_pred eEEEEECCCCcEE-------------------------EEEc--------------------------------------
Confidence 9999998653210 0000
Q ss_pred cccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcce
Q psy10063 676 SINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPI 755 (894)
Q Consensus 676 ~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~ 755 (894)
T Consensus 280 -------------------------------------------------------------------------------- 279 (354)
T 2pbi_B 280 -------------------------------------------------------------------------------- 279 (354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec---cccCCCceEeecCCCeEEEEecCCCCceeEEEee
Q psy10063 756 LAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG---FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYH 831 (894)
Q Consensus 756 ~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~---~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd 831 (894)
...+...+.+++|+|++.+|++|+.|+.|+|||+..++.+.. +...+..++|+|||++|++++.|+ .|+||+
T Consensus 280 ~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~----~v~vW~ 354 (354)
T 2pbi_B 280 KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDH----TLRVWA 354 (354)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTS----EEEEEC
T ss_pred CCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCC----CEEecC
Confidence 000122467899999999999999999999999988876543 444566788999999999999998 699996
No 73
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.7e-30 Score=297.42 Aligned_cols=279 Identities=17% Similarity=0.170 Sum_probs=227.7
Q ss_pred EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063 405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF 484 (894)
Q Consensus 405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~ 484 (894)
..+|...|.|++| ++++|++|+.||.|+|||+.+++.+..+.+|.. .|.+++|
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~-------------------------~v~~l~~ 181 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTG-------------------------SVLCLQY 181 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSS-------------------------CEEEEEC
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCC-------------------------cEEEEEE
Confidence 3467788999887 799999999999999999999999999999988 6778877
Q ss_pred ecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063 485 SKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE 563 (894)
Q Consensus 485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~ 563 (894)
++++|++|+.||.|+|||+++++++..+.. ...|.+++|+ +.+|++++.++. |++||+..+
T Consensus 182 --~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~--------------i~vwd~~~~ 243 (435)
T 1p22_A 182 --DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRS--------------IAVWDMASP 243 (435)
T ss_dssp --CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSC--------------EEEEECSSS
T ss_pred --CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCc--------------EEEEeCCCC
Confidence 788999999999999999999999998875 5789999997 459999999997 888888877
Q ss_pred ceE---EEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063 564 EEF---ARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS 640 (894)
Q Consensus 564 ~~~---~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~ 640 (894)
+.+ ..+.+|...|.+++| ++++|++|+.||.|++||++.++.+
T Consensus 244 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~-------------------------------- 289 (435)
T 1p22_A 244 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFV-------------------------------- 289 (435)
T ss_dssp SCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEE--------------------------------
T ss_pred CCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEE--------------------------------
Confidence 655 667899999999999 7889999999999999998654211
Q ss_pred CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063 641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH 720 (894)
Q Consensus 641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~ 720 (894)
T Consensus 290 -------------------------------------------------------------------------------- 289 (435)
T 1p22_A 290 -------------------------------------------------------------------------------- 289 (435)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc
Q psy10063 721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL 800 (894)
Q Consensus 721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~ 800 (894)
..+.+|...|.++++ ++.+|++|+.|+.|++||++.++.+..+..
T Consensus 290 ---------------------------------~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 334 (435)
T 1p22_A 290 ---------------------------------RTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG 334 (435)
T ss_dssp ---------------------------------EEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred ---------------------------------EEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeC
Confidence 012235556777777 478999999999999999998887665543
Q ss_pred CCC-ceEeecCCCeEEEEecCCCCceeEEEeecCCcc---------eeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEE
Q psy10063 801 SCP-DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE---------EFARIKGHFGPINSLAFHPDGKSYASGGEDGFVR 870 (894)
Q Consensus 801 ~~~-~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~---------~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~ 870 (894)
... ..++..++.++++++.++ .|+|||+..++ ++..+.+|.+.|.+|+| ++++|++++.||.|+
T Consensus 335 h~~~v~~~~~~~~~l~sg~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~ 408 (435)
T 1p22_A 335 HEELVRCIRFDNKRIVSGAYDG----KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 408 (435)
T ss_dssp CSSCEEEEECCSSEEEEEETTS----CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEE
T ss_pred CcCcEEEEEecCCEEEEEeCCC----cEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEE
Confidence 322 233555999999999887 59999998776 78889999999999999 789999999999999
Q ss_pred EEecCcccccccc
Q psy10063 871 LHTFDQAYFDYTF 883 (894)
Q Consensus 871 vWdl~~~~~~~~~ 883 (894)
||++.........
T Consensus 409 iwd~~~~~~~~~~ 421 (435)
T 1p22_A 409 IWDFLNDPAAQAE 421 (435)
T ss_dssp EEC----------
T ss_pred EEECCCCCCcccC
Confidence 9999877655443
No 74
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-31 Score=294.02 Aligned_cols=258 Identities=14% Similarity=0.211 Sum_probs=211.4
Q ss_pred EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecC--CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063 401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLR--MGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP 478 (894)
Q Consensus 401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~--tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~ 478 (894)
+...+.+|.+.|.+++|+|++++|++|+.||.|+|||+. .++.+..+.+|.. .
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~-------------------------~ 57 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEG-------------------------P 57 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-------------------------C
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCC-------------------------c
Confidence 345678999999999999999999999999999999998 6677888899987 6
Q ss_pred eEEEEEecC--CCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCeeEEEEcCC--CCEEEEEECCCCeEEEeccCccc
Q psy10063 479 INDMQFSKD--ATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVNSAALSPI--LPHVVLGGGQEAREVTTTSTKVG 551 (894)
Q Consensus 479 V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~~l~~spd--g~~l~~~~~~~~~~v~~~~~~~~ 551 (894)
|.+|+|+++ +.+|++|+.||.|+|||++.++ .+..+. +...|.+++|+|+ +.+|++++.++.
T Consensus 58 v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~----------- 126 (379)
T 3jrp_A 58 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK----------- 126 (379)
T ss_dssp EEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE-----------
T ss_pred EEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCc-----------
Confidence 888888766 8999999999999999999987 555555 5689999999999 999999999997
Q ss_pred eeeEEEEecccc--ceEEEccCCCCCeEEEEEec-------------CCCEEEEEeCCCcEEEEECCCCccccCCCceee
Q psy10063 552 KFDARFYHLIFE--EEFARIKGHFGPINSLAFHP-------------DGKSYASGGEDGFLISNTLSNGLDISEGSFTSS 616 (894)
Q Consensus 552 ~~~v~vwd~~~~--~~~~~l~~h~~~V~~l~~sp-------------dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~ 616 (894)
|++||+..+ .....+.+|...|.+++|+| ++.+|++++.||.|++||++.+....
T Consensus 127 ---i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~------- 196 (379)
T 3jrp_A 127 ---VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY------- 196 (379)
T ss_dssp ---EEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEE-------
T ss_pred ---EEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcce-------
Confidence 888888776 34456678999999999999 69999999999999999985432100
Q ss_pred eEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeE
Q psy10063 617 STQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVE 696 (894)
Q Consensus 617 ~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 696 (894)
.
T Consensus 197 ------------------~------------------------------------------------------------- 197 (379)
T 3jrp_A 197 ------------------V------------------------------------------------------------- 197 (379)
T ss_dssp ------------------E-------------------------------------------------------------
T ss_pred ------------------e-------------------------------------------------------------
Confidence 0
Q ss_pred eccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC---CC
Q psy10063 697 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK---RE 773 (894)
Q Consensus 697 ~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd---g~ 773 (894)
....+.+|...|.+++|+|+ +.
T Consensus 198 -------------------------------------------------------~~~~~~~h~~~v~~~~~sp~~~~~~ 222 (379)
T 3jrp_A 198 -------------------------------------------------------LESTLEGHSDWVRDVAWSPTVLLRS 222 (379)
T ss_dssp -------------------------------------------------------EEEEECCCSSCEEEEEECCCCSSSE
T ss_pred -------------------------------------------------------eEEEEecccCcEeEEEECCCCCCCC
Confidence 00123457788999999999 89
Q ss_pred EEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEE
Q psy10063 774 KLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF 853 (894)
Q Consensus 774 ~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~f 853 (894)
+|++++.||.|+|||+....... ...+.....|...|.+++|
T Consensus 223 ~l~s~~~dg~i~iwd~~~~~~~~--------------------------------------~~~~~~~~~~~~~v~~~~~ 264 (379)
T 3jrp_A 223 YLASVSQDRTCIIWTQDNEQGPW--------------------------------------KKTLLKEEKFPDVLWRASW 264 (379)
T ss_dssp EEEEEETTSCEEEEEESSTTSCC--------------------------------------EEEESSSSCCSSCEEEEEE
T ss_pred eEEEEeCCCEEEEEeCCCCCccc--------------------------------------eeeeeccccCCCcEEEEEE
Confidence 99999999999999876532100 0111223468889999999
Q ss_pred eeCCcEEEEecCCCcEEEEecCc
Q psy10063 854 HPDGKSYASGGEDGFVRLHTFDQ 876 (894)
Q Consensus 854 Spdg~~LaS~s~Dg~V~vWdl~~ 876 (894)
+|+|++|++++.||.|+||++..
T Consensus 265 s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 265 SLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CSSSCCEEEEESSSSEEEEEEEE
T ss_pred cCCCCEEEEecCCCcEEEEeCCC
Confidence 99999999999999999999974
No 75
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.98 E-value=7.5e-31 Score=294.78 Aligned_cols=279 Identities=14% Similarity=0.153 Sum_probs=222.9
Q ss_pred CCccceeeeeccCccEEEecCCC-eEE----------EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe---
Q psy10063 377 PLSVDRLNSMSPAARKLATNAEP-VVK----------MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR--- 442 (894)
Q Consensus 377 ~~~~~~~~~~s~dg~~l~~~~~~-~~~----------~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~--- 442 (894)
+......++|+|+|++|+.++.+ .++ ..+.+|...|.+++|+|+|++|++|+.|+.|+|||+....
T Consensus 65 H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~ 144 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRD 144 (380)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCC
T ss_pred cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcccc
Confidence 34455667899999999887654 333 3677899999999999999999999999999999987532
Q ss_pred ----EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC-CCEEEEEECCCCEEEEEcCCCcEEEEEe--
Q psy10063 443 ----ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD-ATMFITASKDHTAKLFTTHDRQLLKTYT-- 515 (894)
Q Consensus 443 ----~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd-g~~L~sgs~Dg~V~iwdl~~~~~~~~~~-- 515 (894)
..+.+.+|.+ .|.+++|.|+ +.+|++|+.|+.|+|||+++++++..+.
T Consensus 145 ~~~~~~~~~~gh~~-------------------------~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~ 199 (380)
T 3iz6_a 145 GNMPVSRVLTGHKG-------------------------YASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE 199 (380)
T ss_dssp CSSTTCCBCCCCSS-------------------------CCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCC
T ss_pred CCccceeeccCCCc-------------------------ceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecc
Confidence 2345667766 6777777775 4579999999999999999999998873
Q ss_pred ----CCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEecc-ccceEEEccCCCCCeEEEEEecCCCEEE
Q psy10063 516 ----TERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI-FEEEFARIKGHFGPINSLAFHPDGKSYA 589 (894)
Q Consensus 516 ----~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~-~~~~~~~l~~h~~~V~~l~~spdg~~l~ 589 (894)
|...|.+++|++ ++.+|++++.|+. |++||++ .++.+..+.+|.+.|.+|+|+|++++|+
T Consensus 200 ~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~--------------v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 265 (380)
T 3iz6_a 200 FPSGHTADVLSLSINSLNANMFISGSCDTT--------------VRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFG 265 (380)
T ss_dssp SSSSCCSCEEEEEECSSSCCEEEEEETTSC--------------EEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEE
T ss_pred cCCCCccCeEEEEeecCCCCEEEEEECCCe--------------EEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEE
Confidence 457899999977 8899999999997 8999987 4577888999999999999999999999
Q ss_pred EEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHH
Q psy10063 590 SGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIE 669 (894)
Q Consensus 590 sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~ 669 (894)
+|+.||.|+|||++.++.+. .+....
T Consensus 266 s~s~D~~i~lwd~~~~~~~~-------------------------~~~~~~----------------------------- 291 (380)
T 3iz6_a 266 TGSDDGTCRLFDMRTGHQLQ-------------------------VYNREP----------------------------- 291 (380)
T ss_dssp EECSSSCEEEEETTTTEEEE-------------------------EECCCC-----------------------------
T ss_pred EEcCCCeEEEEECCCCcEEE-------------------------Eecccc-----------------------------
Confidence 99999999999997653210 000000
Q ss_pred HhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccC
Q psy10063 670 MARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLD 749 (894)
Q Consensus 670 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~d 749 (894)
T Consensus 292 -------------------------------------------------------------------------------- 291 (380)
T 3iz6_a 292 -------------------------------------------------------------------------------- 291 (380)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec-------cccCCCceEeecCCCeEEEEecCCC
Q psy10063 750 GSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG-------FLLSCPDFLFDFDTTREVTTTSTKV 822 (894)
Q Consensus 750 g~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~-------~~~~~~~~~fS~dg~~l~~as~d~~ 822 (894)
.....+...|.+++|+|+|++|++|+.||.|++||....+.+.. +...+..++|++||.+|++++.|+
T Consensus 292 ----~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~- 366 (380)
T 3iz6_a 292 ----DRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK- 366 (380)
T ss_dssp ----SSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS-
T ss_pred ----cccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC-
Confidence 00011223467899999999999999999999999987776432 334566889999999999999998
Q ss_pred CceeEEEeecCCcc
Q psy10063 823 GKFDARFYHLIFEE 836 (894)
Q Consensus 823 g~~~I~vwd~~tg~ 836 (894)
.|+||++..++
T Consensus 367 ---~i~iW~~~~~~ 377 (380)
T 3iz6_a 367 ---NLKIWAFSGHR 377 (380)
T ss_dssp ---CEEEEECCSSS
T ss_pred ---CEEEEecCCCc
Confidence 59999987654
No 76
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.98 E-value=6.5e-30 Score=281.28 Aligned_cols=184 Identities=16% Similarity=0.226 Sum_probs=145.9
Q ss_pred eeeeeccCccEEEecCCC---eEEEEE-ec-CCCCEEEEEEccCCCEEEEecCCCcEEEEecCC-------CeEEEEecC
Q psy10063 382 RLNSMSPAARKLATNAEP---VVKMQV-TD-QSAKITSLLWGNLDQYIITGHAKGDICTWDLRM-------GRELESISG 449 (894)
Q Consensus 382 ~~~~~s~dg~~l~~~~~~---~~~~~l-~~-H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t-------g~~~~~l~~ 449 (894)
.+...+.||.+.+..... .+...+ .+ |.+.|.+|+|+|++++|++|+.|+.|+|||+.. .+++..+.+
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 105 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG 105 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC
Confidence 344445555544433221 233334 34 999999999999999999999999999999853 456777888
Q ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCC----CcEEEEEe-CCCCeeEEE
Q psy10063 450 HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHD----RQLLKTYT-TERPVNSAA 524 (894)
Q Consensus 450 h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~----~~~~~~~~-~~~~v~~l~ 524 (894)
|.. .|.+|+|+|+|++|++|+.|+.|+|||++. .+++..+. |...|.+++
T Consensus 106 h~~-------------------------~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 106 HEN-------------------------EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp ----------------------------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred CCC-------------------------cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 887 788999999999999999999999999953 24566666 458899999
Q ss_pred EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc--ceEEEccCCCCCeEEEEEecC--CCEEEEEeCCCcEEEE
Q psy10063 525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE--EEFARIKGHFGPINSLAFHPD--GKSYASGGEDGFLISN 600 (894)
Q Consensus 525 ~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~--~~~~~l~~h~~~V~~l~~spd--g~~l~sgs~Dg~I~vw 600 (894)
|+|++.+|++++.|+. |++||+..+ +++..+.+|.+.|.+++|+|+ +.+|++|+.|+.|++|
T Consensus 161 ~~p~~~~l~s~s~D~~--------------i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw 226 (330)
T 2hes_X 161 WHPSEALLASSSYDDT--------------VRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226 (330)
T ss_dssp ECSSSSEEEEEETTSC--------------EEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEE
T ss_pred ECCCCCEEEEEcCCCe--------------EEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEE
Confidence 9999999999999997 888888765 678889999999999999998 6789999999999999
Q ss_pred ECCC
Q psy10063 601 TLSN 604 (894)
Q Consensus 601 dl~~ 604 (894)
++..
T Consensus 227 ~~~~ 230 (330)
T 2hes_X 227 KYMG 230 (330)
T ss_dssp EEEE
T ss_pred EecC
Confidence 9743
No 77
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=4.5e-30 Score=291.44 Aligned_cols=207 Identities=17% Similarity=0.165 Sum_probs=177.4
Q ss_pred eeeeccCccEEEecCCC-eEEEE----------EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCC
Q psy10063 383 LNSMSPAARKLATNAEP-VVKMQ----------VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHA 451 (894)
Q Consensus 383 ~~~~s~dg~~l~~~~~~-~~~~~----------l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~ 451 (894)
.++|+++|++|+.+..+ .+++. +..| ..+....|++++++|++|+.||.|+|||+..++++..+.+|.
T Consensus 61 ~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~ 139 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV 139 (420)
T ss_dssp TCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSS
T ss_pred ceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccccc
Confidence 46899999999877654 33331 1123 445566889999999999999999999999999999889999
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCCc------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE
Q psy10063 452 KEPINDMQFSKDATMFITASHSQAV------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT 513 (894)
Q Consensus 452 ~~~V~~v~~spdg~~la~~~~d~~i------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~ 513 (894)
. .|.+++|+|++++|++++.|+.+ ..|.+++|+|++++|++++.||.|+|||++.++++..
T Consensus 140 ~-~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 218 (420)
T 3vl1_A 140 S-EITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHT 218 (420)
T ss_dssp S-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred C-ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEE
Confidence 8 99999999999999999999877 5899999999999999999999999999999999988
Q ss_pred EeC----CCCeeE---------------------EEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063 514 YTT----ERPVNS---------------------AALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR 568 (894)
Q Consensus 514 ~~~----~~~v~~---------------------l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~ 568 (894)
+.. ...+.+ ++|+|+|++|++++.++. |++||++.++.+..
T Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--------------i~i~d~~~~~~~~~ 284 (420)
T 3vl1_A 219 FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGV--------------ITVHNVFSKEQTIQ 284 (420)
T ss_dssp ECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSC--------------EEEEETTTCCEEEE
T ss_pred eecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCe--------------EEEEECCCCceeEE
Confidence 863 234444 455789999999999997 89999998887776
Q ss_pred cc-CCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCC
Q psy10063 569 IK-GHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 569 l~-~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~ 605 (894)
+. +|...|.+++|+|+++ +|++|+.||.|++||++.+
T Consensus 285 ~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 285 LPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp ECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred cccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC
Confidence 64 5889999999999999 9999999999999999754
No 78
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-29 Score=289.98 Aligned_cols=302 Identities=12% Similarity=0.068 Sum_probs=227.4
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEecCCCe---EEEEecCCCCCCeeEEEEc---CCCCEEEEEeC-----------
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGR---ELESISGHAKEPINDMQFS---KDATMFITASH----------- 472 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~---~~~~l~~h~~~~V~~v~~s---pdg~~la~~~~----------- 472 (894)
.+|.+++|++||++|+++ .++.|+|||+.+|+ .+..+..+.. .+..+.+. .++..+.....
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFD-KIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccc-cccccccccchhhccccccccccccccccCcCc
Confidence 578999999999977766 47799999999998 7777765543 22222221 11111111110
Q ss_pred ----------------CCCccceEEEEEecCCCEE-EEEECCCCEEEEEcC--CCcEEEEEe---CCCCeeEEEEcCCCC
Q psy10063 473 ----------------SQAVEPINDMQFSKDATMF-ITASKDHTAKLFTTH--DRQLLKTYT---TERPVNSAALSPILP 530 (894)
Q Consensus 473 ----------------d~~i~~V~~l~~spdg~~L-~sgs~Dg~V~iwdl~--~~~~~~~~~---~~~~v~~l~~spdg~ 530 (894)
.+....|.+++|+|++++| ++|+.||.|+|||+. .++++..+. +...|.+++|+|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 0111369999999999996 889999999999999 888888774 468899999999999
Q ss_pred EEEEEECCCCeEEEeccCccceeeEEEEeccccceEE----EccCCCCCeEEEEEecC---CCEEEEEeCCCcEEEEECC
Q psy10063 531 HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA----RIKGHFGPINSLAFHPD---GKSYASGGEDGFLISNTLS 603 (894)
Q Consensus 531 ~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~----~l~~h~~~V~~l~~spd---g~~l~sgs~Dg~I~vwdl~ 603 (894)
+|++++.++. |++|++..++... .+.+|...|.+|+|+|+ +++|++|+.|+.|++||+.
T Consensus 163 ~l~~~~~~g~--------------v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 163 TVIIADKFGD--------------VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp EEEEEETTSE--------------EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES
T ss_pred EEEEEeCCCc--------------EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC
Confidence 9999999886 7788877766443 77889999999999999 9999999999999999986
Q ss_pred CCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCe
Q psy10063 604 NGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTR 683 (894)
Q Consensus 604 ~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~ 683 (894)
.++.+.
T Consensus 229 ~~~~~~-------------------------------------------------------------------------- 234 (450)
T 2vdu_B 229 QCFIVD-------------------------------------------------------------------------- 234 (450)
T ss_dssp CTTCEE--------------------------------------------------------------------------
T ss_pred CCceee--------------------------------------------------------------------------
Confidence 432100
Q ss_pred EEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCce
Q psy10063 684 LHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIG 763 (894)
Q Consensus 684 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v 763 (894)
.++.+|...|
T Consensus 235 ----------------------------------------------------------------------~~~~~h~~~v 244 (450)
T 2vdu_B 235 ----------------------------------------------------------------------KWLFGHKHFV 244 (450)
T ss_dssp ----------------------------------------------------------------------EECCCCSSCE
T ss_pred ----------------------------------------------------------------------eeecCCCCce
Confidence 0123577789
Q ss_pred EEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc----------------------------cCCCceEeecCCCeEE
Q psy10063 764 FKMPEPPKREKLALALADKVSERYRDRKNKATAGFL----------------------------LSCPDFLFDFDTTREV 815 (894)
Q Consensus 764 ~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~----------------------------~~~~~~~fS~dg~~l~ 815 (894)
.+++|+ ++++|++++.|+.|+|||+..++.+..+. ..+..++|++++++++
T Consensus 245 ~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 323 (450)
T 2vdu_B 245 SSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVA 323 (450)
T ss_dssp EEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEE
T ss_pred EEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEE
Confidence 999999 99999999999999999999888755443 1234678999999999
Q ss_pred EEe-cCCCCceeEEEeec--CCc---ceeeeccCCCCCeeEEEEeeCCcEEEEecC------CCcEEEEecCcc
Q psy10063 816 TTT-STKVGKFDARFYHL--IFE---EEFARIKGHFGPINSLAFHPDGKSYASGGE------DGFVRLHTFDQA 877 (894)
Q Consensus 816 ~as-~d~~g~~~I~vwd~--~tg---~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~------Dg~V~vWdl~~~ 877 (894)
+++ .++ .|+||++ ..+ +++..+.+| +.|.+|+|+|++.+++.++. +..|+||.+...
T Consensus 324 ~~~~~d~----~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 324 FFVEATK----CIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEETTCS----EEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEECCCC----eEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 998 554 6999999 666 677788888 88999999996554444443 556899987543
No 79
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=7e-29 Score=301.46 Aligned_cols=164 Identities=26% Similarity=0.431 Sum_probs=148.2
Q ss_pred EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063 403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM 482 (894)
Q Consensus 403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l 482 (894)
..+.+|.+.|.+|+|+|+|++|++|+.||.|+|||+.++++++.+.+|.. .|.++
T Consensus 424 ~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~-------------------------~v~~~ 478 (694)
T 3dm0_A 424 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK-------------------------DVLSV 478 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-------------------------CEEEE
T ss_pred ceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCC-------------------------CEEEE
Confidence 35779999999999999999999999999999999999999999999988 78888
Q ss_pred EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe----CCCCeeEEEEcCCC--CEEEEEECCCCeEEEeccCccceeeEE
Q psy10063 483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYT----TERPVNSAALSPIL--PHVVLGGGQEAREVTTTSTKVGKFDAR 556 (894)
Q Consensus 483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~----~~~~v~~l~~spdg--~~l~~~~~~~~~~v~~~~~~~~~~~v~ 556 (894)
+|+|++++|++|+.|+.|+|||+.......... |...|.+++|+|++ ..|++++.++. |+
T Consensus 479 ~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~--------------v~ 544 (694)
T 3dm0_A 479 AFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKT--------------VK 544 (694)
T ss_dssp EECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSC--------------EE
T ss_pred EEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCe--------------EE
Confidence 899999999999999999999987654443332 45679999999987 57999999997 89
Q ss_pred EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063 557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~ 605 (894)
+||+..++++..+.+|.+.|.+|+|+|+|++|++|+.||.|+|||+..+
T Consensus 545 vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 545 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG 593 (694)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999999999999999999999999999999999999999999998654
No 80
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=9.4e-30 Score=287.82 Aligned_cols=281 Identities=11% Similarity=0.095 Sum_probs=224.1
Q ss_pred CCEEEEEEccCCCEE-EEecCCCcEEEEecCCCe----EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063 410 AKITSLLWGNLDQYI-ITGHAKGDICTWDLRMGR----ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF 484 (894)
Q Consensus 410 ~~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~----~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~ 484 (894)
.....++++|+...+ ++++.||.|+||++.... .+..+.+|.+ .|.+++|
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~-------------------------~V~~~~~ 89 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTA-------------------------PVLDIAW 89 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSS-------------------------CEEEEEE
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCC-------------------------CEEEEEe
Confidence 344568888877644 457889999999996543 2445667776 7888999
Q ss_pred ec-CCCEEEEEECCCCEEEEEcCCC-------cEEEEEe-CCCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCccceee
Q psy10063 485 SK-DATMFITASKDHTAKLFTTHDR-------QLLKTYT-TERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTKVGKFD 554 (894)
Q Consensus 485 sp-dg~~L~sgs~Dg~V~iwdl~~~-------~~~~~~~-~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~~~~~~ 554 (894)
+| ++.+|++|+.||.|+|||+..+ +++..+. |...|.+++|+|++ .+|++++.++.
T Consensus 90 ~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~-------------- 155 (402)
T 2aq5_A 90 CPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV-------------- 155 (402)
T ss_dssp CTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC--------------
T ss_pred CCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE--------------
Confidence 99 8999999999999999999987 5566666 56899999999998 69999999987
Q ss_pred EEEEeccccceEEEc--cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCe
Q psy10063 555 ARFYHLIFEEEFARI--KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGH 632 (894)
Q Consensus 555 v~vwd~~~~~~~~~l--~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~ 632 (894)
|++||+..++.+..+ .+|...|.+++|+|++++|++++.||.|++||++.++.+.
T Consensus 156 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~----------------------- 212 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVA----------------------- 212 (402)
T ss_dssp EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE-----------------------
T ss_pred EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceee-----------------------
Confidence 899999999999998 8899999999999999999999999999999986543110
Q ss_pred EEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEE
Q psy10063 633 IHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSI 712 (894)
Q Consensus 633 i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 712 (894)
.
T Consensus 213 --~----------------------------------------------------------------------------- 213 (402)
T 2aq5_A 213 --E----------------------------------------------------------------------------- 213 (402)
T ss_dssp --E-----------------------------------------------------------------------------
T ss_pred --e-----------------------------------------------------------------------------
Confidence 0
Q ss_pred cCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCc-eEEEeeCCCCCEEEEe---cCCCcEEEEE
Q psy10063 713 NHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDI-GFKMPEPPKREKLALA---LADKVSERYR 788 (894)
Q Consensus 713 s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~-v~~la~spdg~~Latg---s~Dg~I~iwd 788 (894)
+..+|.+. +.+++|+|++.+|++| +.|+.|++||
T Consensus 214 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 214 ------------------------------------------KDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWD 251 (402)
T ss_dssp ------------------------------------------EECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEE
T ss_pred ------------------------------------------eccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEc
Confidence 00123222 6688899999999999 8999999999
Q ss_pred ccCCce-e--e--ccccCCCceEeecCCCeEEEEe-cCCCCceeEEEeecCCcce-eeeccC--CCCCeeEEEEeeCCcE
Q psy10063 789 DRKNKA-T--A--GFLLSCPDFLFDFDTTREVTTT-STKVGKFDARFYHLIFEEE-FARIKG--HFGPINSLAFHPDGKS 859 (894)
Q Consensus 789 ~~~~~~-~--~--~~~~~~~~~~fS~dg~~l~~as-~d~~g~~~I~vwd~~tg~~-l~~l~g--H~~~V~~l~fSpdg~~ 859 (894)
++..+. + . .+...+..++|+++++++++++ .++ .|+|||+..++. +..+.. |...|.+|+|+|++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg----~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~ 327 (402)
T 2aq5_A 252 TKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS----SIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGL 327 (402)
T ss_dssp TTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS----CEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGS
T ss_pred CccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC----eEEEEEecCCCcceEeecccccCCcccceEEeccccc
Confidence 988654 1 1 2233455778999999997665 455 599999998874 555544 5589999999999998
Q ss_pred EEEecCCCcEEEEecCcccc
Q psy10063 860 YASGGEDGFVRLHTFDQAYF 879 (894)
Q Consensus 860 LaS~s~Dg~V~vWdl~~~~~ 879 (894)
|++ .|+.+++|++..+.+
T Consensus 328 ~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 328 EVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp CGG--GTEEEEEEEEETTEE
T ss_pred cee--cceeEEEEEcCCCcE
Confidence 875 466899999987654
No 81
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.6e-30 Score=297.25 Aligned_cols=186 Identities=14% Similarity=0.108 Sum_probs=162.3
Q ss_pred EEecCCCCEEEEEEccC------CCEEEEecCCCcEEEEecCCCeE-----------EEEecCCCCCCeeEEEEcCCCCE
Q psy10063 404 QVTDQSAKITSLLWGNL------DQYIITGHAKGDICTWDLRMGRE-----------LESISGHAKEPINDMQFSKDATM 466 (894)
Q Consensus 404 ~l~~H~~~V~~l~~spd------g~~L~sgs~Dg~I~iWd~~tg~~-----------~~~l~~h~~~~V~~v~~spdg~~ 466 (894)
.+.+|.+.|.+|+|+|+ +++||+|+.||.|+|||+..++. ...+.+|.. .|.+++|++++ +
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~-~v~sv~~s~~~-~ 279 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADS-LITTFDFLSPT-T 279 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTT-CEEEEEESSSS-E
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCC-CEEEEEecCCC-e
Confidence 35678899999999997 57999999999999999987642 246788887 99999999864 8
Q ss_pred EEEEeCCCCc-------------------cceEEE--EEecCC-CEEEEEECCCCEEEEEcCCCcEEEEEeCC---CCee
Q psy10063 467 FITASHSQAV-------------------EPINDM--QFSKDA-TMFITASKDHTAKLFTTHDRQLLKTYTTE---RPVN 521 (894)
Q Consensus 467 la~~~~d~~i-------------------~~V~~l--~~spdg-~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~---~~v~ 521 (894)
|++|+.|+.+ ..|.+| +|+++| .+||+|+.|+.|+|||+++++++..+..+ ..|.
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 9999998876 478888 578888 89999999999999999998877666532 3588
Q ss_pred EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10063 522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNT 601 (894)
Q Consensus 522 ~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwd 601 (894)
+++|+|+++.|++++.++. |++||++.+.++..+.+|.+.|.+|+|+|+|++|++|+.||.|++|+
T Consensus 360 ~v~fsp~~~~l~s~~~d~t--------------v~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGASS--------------LRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp CEEEETTTTEEEEECSSSE--------------EEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred ceEeCCCcCeEEEeCCCCc--------------EEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence 9999999999999988886 89999999998888999999999999999999999999999999999
Q ss_pred CCCC
Q psy10063 602 LSNG 605 (894)
Q Consensus 602 l~~~ 605 (894)
+..+
T Consensus 426 ~~~~ 429 (524)
T 2j04_B 426 AARR 429 (524)
T ss_dssp SCSS
T ss_pred chHh
Confidence 8643
No 82
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=1.3e-29 Score=283.04 Aligned_cols=278 Identities=12% Similarity=0.056 Sum_probs=203.5
Q ss_pred cceeeeeccCccEEEecCCC--------eEEE--------------------EEecCCCCEEEEEEccCCCEEEEec---
Q psy10063 380 VDRLNSMSPAARKLATNAEP--------VVKM--------------------QVTDQSAKITSLLWGNLDQYIITGH--- 428 (894)
Q Consensus 380 ~~~~~~~s~dg~~l~~~~~~--------~~~~--------------------~l~~H~~~V~~l~~spdg~~L~sgs--- 428 (894)
....++|++||++|+.++++ .+++ .|.+|...|.+++|+ +++|++|.
T Consensus 16 PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~ 93 (365)
T 4h5i_A 16 PAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNEN 93 (365)
T ss_dssp CEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCC
T ss_pred CEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCC
Confidence 34567899999999986432 1222 355788888888764 56676654
Q ss_pred --------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE--CCC
Q psy10063 429 --------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS--KDH 498 (894)
Q Consensus 429 --------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs--~Dg 498 (894)
.|+.|++|++..+.....+.. .+.+... ......+.+++|+|||++|++++ .|+
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~-------~~~~~~~---------~~~~~~~~~v~fSpDg~~la~as~~~d~ 157 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLT-------SVDFDAS---------TNADDYTKLVYISREGTVAAIASSKVPA 157 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEE-------EECSSCC---------CCTTCCEEEEEECTTSSCEEEEESCSSC
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEee-------eeceeec---------CCcccCEEEEEEcCCCCEEEEEECCCCC
Confidence 466788888765432111110 0000000 00002578899999999877554 789
Q ss_pred CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE--ccCCCCCe
Q psy10063 499 TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPI 576 (894)
Q Consensus 499 ~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V 576 (894)
.|+|||+++++++..+.++..|.+|+|+|||++|++++.++ +++|+...++.+.. +.+|...|
T Consensus 158 ~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~---------------~~~~~~~~~~~~~~~~~~~~~~~v 222 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS---------------LEVISTVTGSCIARKTDFDKNWSL 222 (365)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC---------------EEEEETTTCCEEEEECCCCTTEEE
T ss_pred EEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee---------------EEEEEeccCcceeeeecCCCCCCE
Confidence 99999999999999999999999999999999999998665 66777777766543 45688899
Q ss_pred EEEEEecCCCEEEEEeCCC----cEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeec
Q psy10063 577 NSLAFHPDGKSYASGGEDG----FLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSG 652 (894)
Q Consensus 577 ~~l~~spdg~~l~sgs~Dg----~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sg 652 (894)
.+++|+|++++|++++.|+ .+++|++...... ..
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~--------------------------~~---------------- 260 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS--------------------------VL---------------- 260 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE--------------------------EE----------------
T ss_pred EEEEEcCCCCEEEEEecCCcceeEEeecccccceec--------------------------ce----------------
Confidence 9999999999999999887 4666665322100 00
Q ss_pred cccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccC
Q psy10063 653 SRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDA 732 (894)
Q Consensus 653 s~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~ 732 (894)
T Consensus 261 -------------------------------------------------------------------------------- 260 (365)
T 4h5i_A 261 -------------------------------------------------------------------------------- 260 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc----CCCceEee
Q psy10063 733 SPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL----SCPDFLFD 808 (894)
Q Consensus 733 ~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~----~~~~~~fS 808 (894)
....+.+|...|.+|+|+|||++||+|+.|+.|+|||+++++++..+.. .+.+++|+
T Consensus 261 -------------------~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fS 321 (365)
T 4h5i_A 261 -------------------RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTIS 321 (365)
T ss_dssp -------------------EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEEC
T ss_pred -------------------eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEEC
Confidence 0012345777899999999999999999999999999999988765543 45578899
Q ss_pred cCCCeEEEEecCCCCceeEEEeecCCc
Q psy10063 809 FDTTREVTTTSTKVGKFDARFYHLIFE 835 (894)
Q Consensus 809 ~dg~~l~~as~d~~g~~~I~vwd~~tg 835 (894)
|||++|++++.|+ .|+|||+...
T Consensus 322 pdg~~laS~S~D~----tvrvw~ip~~ 344 (365)
T 4h5i_A 322 PDSTYVASVSAAN----TIHIIKLPLN 344 (365)
T ss_dssp TTSCEEEEEETTS----EEEEEECCTT
T ss_pred CCCCEEEEEeCCC----eEEEEEcCCC
Confidence 9999999999998 6999999643
No 83
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=6.1e-29 Score=275.56 Aligned_cols=250 Identities=13% Similarity=0.118 Sum_probs=202.1
Q ss_pred CCCCEEEEEEccC----CCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063 408 QSAKITSLLWGNL----DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ 483 (894)
Q Consensus 408 H~~~V~~l~~spd----g~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~ 483 (894)
|.+.|.+++|+|+ |++|++|+.||.|+|||+.+++.+..+.+|.. .|.+++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-------------------------~i~~~~ 122 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGN-------------------------AINELK 122 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCS-------------------------CEEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCC-------------------------cEEEEE
Confidence 6788999999999 67999999999999999999999999999987 788888
Q ss_pred Eec-CCCEEEEEECCCCEEEEEcCCCcEEEEE----eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063 484 FSK-DATMFITASKDHTAKLFTTHDRQLLKTY----TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY 558 (894)
Q Consensus 484 ~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~----~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw 558 (894)
|+| ++.+|++|+.||.|+|||++.++.+..+ .+...|.+++|+|++++|++++.++. |++|
T Consensus 123 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------i~i~ 188 (366)
T 3k26_A 123 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHS--------------LKLW 188 (366)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSC--------------EEEE
T ss_pred ECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCC--------------EEEE
Confidence 888 8999999999999999999999999988 35689999999999999999999997 7777
Q ss_pred eccccceEEEc----------------------------cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC
Q psy10063 559 HLIFEEEFARI----------------------------KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE 610 (894)
Q Consensus 559 d~~~~~~~~~l----------------------------~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~ 610 (894)
|++.++.+..+ .+|...|.+++|+ +++|++++.||.|++||+........
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~ 266 (366)
T 3k26_A 189 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDID 266 (366)
T ss_dssp ESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGG
T ss_pred ECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccccc
Confidence 77766544333 3499999999998 77999999999999999876532100
Q ss_pred CCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccC
Q psy10063 611 GSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFD 690 (894)
Q Consensus 611 ~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 690 (894)
. .. .. ...
T Consensus 267 ~-----------------------------~~---------~~---~~~------------------------------- 274 (366)
T 3k26_A 267 K-----------------------------IK---------PS---ESN------------------------------- 274 (366)
T ss_dssp G-----------------------------CC---------TT---CCC-------------------------------
T ss_pred c-----------------------------cc---------cC---Ccc-------------------------------
Confidence 0 00 00 000
Q ss_pred CcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC
Q psy10063 691 EQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP 770 (894)
Q Consensus 691 ~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp 770 (894)
......+.+|...|.+++|+|
T Consensus 275 -----------------------------------------------------------~~~~~~~~~~~~~v~~~~~s~ 295 (366)
T 3k26_A 275 -----------------------------------------------------------VTILGRFDYSQCDIWYMRFSM 295 (366)
T ss_dssp -----------------------------------------------------------EEEEEEEECSSCCSSCCCCEE
T ss_pred -----------------------------------------------------------hheeccccccCCcEEEEEEcC
Confidence 000113445777788999999
Q ss_pred C--CCEEEEecCCCcEEEEEccCCcee-------ecc--ccCCCceEeecCCCeEEEEecCCCCceeEEEeecC
Q psy10063 771 K--REKLALALADKVSERYRDRKNKAT-------AGF--LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLI 833 (894)
Q Consensus 771 d--g~~Latgs~Dg~I~iwd~~~~~~~-------~~~--~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~ 833 (894)
+ +++|++++.||.|++||+..++.+ ..+ ...+..++|++++++|++++.|+ .|+|||+.
T Consensus 296 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg----~i~iwd~~ 365 (366)
T 3k26_A 296 DFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDA----SIWRWDRL 365 (366)
T ss_dssp CTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS----EEEEEEC-
T ss_pred CCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCC----EEEEEEec
Confidence 9 999999999999999999887532 222 24455788999999999999987 69999985
No 84
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=2.1e-28 Score=272.38 Aligned_cols=188 Identities=12% Similarity=0.137 Sum_probs=157.0
Q ss_pred ccceeeeeccCccEEEecCCC-e------------EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063 379 SVDRLNSMSPAARKLATNAEP-V------------VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE 445 (894)
Q Consensus 379 ~~~~~~~~s~dg~~l~~~~~~-~------------~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~ 445 (894)
.....++|++||++|+.+..+ . ....+.+|.+.|.+++|+|++++|++++.||.|+|||+..++...
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence 344556777888877766321 1 444677899999999999999999999999999999999887655
Q ss_pred Ee--cCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE---EEEEe--CCC
Q psy10063 446 SI--SGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQL---LKTYT--TER 518 (894)
Q Consensus 446 ~l--~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~---~~~~~--~~~ 518 (894)
.+ ..|.. .|.+++|+|++++|++++.|+.|++||++.++. ...+. +..
T Consensus 89 ~~~~~~~~~-------------------------~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~ 143 (372)
T 1k8k_C 89 TLVILRINR-------------------------AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS 143 (372)
T ss_dssp EEECCCCSS-------------------------CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS
T ss_pred eEEeecCCC-------------------------ceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC
Confidence 44 45655 788899999999999999999999999998763 33332 467
Q ss_pred CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec------------------cccceEEEccCCCCCeEEEE
Q psy10063 519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL------------------IFEEEFARIKGHFGPINSLA 580 (894)
Q Consensus 519 ~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~------------------~~~~~~~~l~~h~~~V~~l~ 580 (894)
.|.+++|+|++++|++++.++. |++||+ ..++.+..+.+|...|.+++
T Consensus 144 ~i~~~~~~~~~~~l~~~~~dg~--------------i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 209 (372)
T 1k8k_C 144 TVLSLDWHPNSVLLAAGSCDFK--------------CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC 209 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSC--------------EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEE
T ss_pred CeeEEEEcCCCCEEEEEcCCCC--------------EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEE
Confidence 8999999999999999999997 777774 46788889999999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEECCCC
Q psy10063 581 FHPDGKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 581 ~spdg~~l~sgs~Dg~I~vwdl~~~ 605 (894)
|+|++++|++++.||.|++||++.+
T Consensus 210 ~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 210 FSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp ECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCC
Confidence 9999999999999999999998643
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.6e-28 Score=270.49 Aligned_cols=276 Identities=13% Similarity=0.082 Sum_probs=221.4
Q ss_pred CCccceeeeeccCccEEEecCCC-----------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063 377 PLSVDRLNSMSPAARKLATNAEP-----------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE 445 (894)
Q Consensus 377 ~~~~~~~~~~s~dg~~l~~~~~~-----------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~ 445 (894)
+......++|++||++|+.+..+ .....+.+|.+.|.+++|+|++++|++++.||.|+|||+.+++++.
T Consensus 31 h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 31 HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVA 110 (369)
T ss_dssp CSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 34455566788888888766432 2333677899999999999999999999999999999999999988
Q ss_pred EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECC-----CCEEEEEcCCCcE----------
Q psy10063 446 SISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKD-----HTAKLFTTHDRQL---------- 510 (894)
Q Consensus 446 ~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~D-----g~V~iwdl~~~~~---------- 510 (894)
.+. +.. .|.+++|+|++++|++++.+ |.|++||+..++.
T Consensus 111 ~~~-~~~-------------------------~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 164 (369)
T 3zwl_B 111 TWK-SPV-------------------------PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEE 164 (369)
T ss_dssp EEE-CSS-------------------------CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSS
T ss_pred Eee-cCC-------------------------CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccc
Confidence 887 554 67888888888888888888 9999999876532
Q ss_pred -EEEEe-CCC--CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-cceEEEccCCCCCeEEEEEecCC
Q psy10063 511 -LKTYT-TER--PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF-EEEFARIKGHFGPINSLAFHPDG 585 (894)
Q Consensus 511 -~~~~~-~~~--~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~-~~~~~~l~~h~~~V~~l~~spdg 585 (894)
+..+. +.. .+.+++|+|++++|++++.++. |++||+.. ++.+..+..|...|.+++|+|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~--------------i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 230 (369)
T 3zwl_B 165 PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGK--------------ISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL 230 (369)
T ss_dssp CSEEEECCTTCCCEEEEEECGGGCEEEEEETTSE--------------EEEEETTTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred eeeeccCCcCccceeEEEEcCCCCEEEEEcCCCE--------------EEEEECCCCcEeEEEEecCCCceeEEEECCCC
Confidence 22222 233 8999999999999999999986 89999998 78888899999999999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEech
Q psy10063 586 KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKD 665 (894)
Q Consensus 586 ~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~ 665 (894)
++|++++.||.|++||++.++.+. .
T Consensus 231 ~~l~~~~~d~~i~v~d~~~~~~~~-------------------------~------------------------------ 255 (369)
T 3zwl_B 231 TYFITSSRDTNSFLVDVSTLQVLK-------------------------K------------------------------ 255 (369)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEE-------------------------E------------------------------
T ss_pred CEEEEecCCceEEEEECCCCceee-------------------------e------------------------------
Confidence 999999999999999986543110 0
Q ss_pred hhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcc
Q psy10063 666 EQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTP 745 (894)
Q Consensus 666 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~ 745 (894)
T Consensus 256 -------------------------------------------------------------------------------- 255 (369)
T 3zwl_B 256 -------------------------------------------------------------------------------- 255 (369)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCC--------------cEEEEEccCCceeecc---ccCCCceEee
Q psy10063 746 FKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADK--------------VSERYRDRKNKATAGF---LLSCPDFLFD 808 (894)
Q Consensus 746 ~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg--------------~I~iwd~~~~~~~~~~---~~~~~~~~fS 808 (894)
+. +...+.+++|+|++++|++++.++ .|++||...++.+..+ ...+..++|+
T Consensus 256 ----------~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s 324 (369)
T 3zwl_B 256 ----------YE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAIS 324 (369)
T ss_dssp ----------EE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred ----------ec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEEC
Confidence 00 223466778888888888888877 8999999988876544 3445678899
Q ss_pred cCCCeEEEEecCCCCceeEEEeecCCcceeeecc
Q psy10063 809 FDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK 842 (894)
Q Consensus 809 ~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~ 842 (894)
+++++|++++.|+ .|+||+++.+.....+.
T Consensus 325 ~~~~~l~s~~~dg----~v~iw~~~~~~~~~~~~ 354 (369)
T 3zwl_B 325 PQGTSYASGGEDG----FIRLHHFEKSYFDFKYD 354 (369)
T ss_dssp TTSSEEEEEETTS----EEEEEEECHHHHTCCCH
T ss_pred CCCCEEEEEcCCC----eEEEEECccccchhHHH
Confidence 9999999999887 69999999876554443
No 86
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=7.3e-28 Score=270.59 Aligned_cols=276 Identities=14% Similarity=0.070 Sum_probs=223.1
Q ss_pred CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEE-EEEECCCCE
Q psy10063 422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMF-ITASKDHTA 500 (894)
Q Consensus 422 ~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L-~sgs~Dg~V 500 (894)
.+|++++.|+.|+|||+.+++++..+..|. .+.+++|+|+|++| ++++.|+.|
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~--------------------------~~~~~~~s~dg~~l~~~~~~d~~i 56 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS--------------------------NPMGAVISPDGTKVYVANAHSNDV 56 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS--------------------------SEEEEEECTTSSEEEEEEGGGTEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC--------------------------CcceEEECCCCCEEEEECCCCCeE
Confidence 468889999999999999999999988775 47788888888876 566689999
Q ss_pred EEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEE
Q psy10063 501 KLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLA 580 (894)
Q Consensus 501 ~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~ 580 (894)
++||+.+++++..+.++..+.+++|+|+|++|++++.+.. .|++||+..++.+..+..| ..+.+++
T Consensus 57 ~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~-------------~v~v~d~~~~~~~~~~~~~-~~~~~~~ 122 (391)
T 1l0q_A 57 SIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASS-------------TLSVIDTTSNTVAGTVKTG-KSPLGLA 122 (391)
T ss_dssp EEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT-------------EEEEEETTTTEEEEEEECS-SSEEEEE
T ss_pred EEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCC-------------EEEEEECCCCeEEEEEeCC-CCcceEE
Confidence 9999999999999998889999999999999988776533 2899999999988887655 4689999
Q ss_pred EecCCCEE-EEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCc
Q psy10063 581 FHPDGKSY-ASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSG 659 (894)
Q Consensus 581 ~spdg~~l-~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~ 659 (894)
|+++|++| ++++.|+.|++||+..++.+.
T Consensus 123 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~-------------------------------------------------- 152 (391)
T 1l0q_A 123 LSPDGKKLYVTNNGDKTVSVINTVTKAVIN-------------------------------------------------- 152 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEE--------------------------------------------------
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCcEEE--------------------------------------------------
Confidence 99999977 677889999999986543110
Q ss_pred eEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeec
Q psy10063 660 VELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWG 739 (894)
Q Consensus 660 i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~ 739 (894)
T Consensus 153 -------------------------------------------------------------------------------- 152 (391)
T 1l0q_A 153 -------------------------------------------------------------------------------- 152 (391)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcccccCCCCcceecCCCCceEEEeeCCCCCEE-EEecCCCcEEEEEccCCceeeccc--cCCCceEeecCCCeEEE
Q psy10063 740 HIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKL-ALALADKVSERYRDRKNKATAGFL--LSCPDFLFDFDTTREVT 816 (894)
Q Consensus 740 ~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~L-atgs~Dg~I~iwd~~~~~~~~~~~--~~~~~~~fS~dg~~l~~ 816 (894)
.+..| ..+.+++|+|++++| ++++.|+.|++||+..++.+..+. .....++|+++|+++++
T Consensus 153 ---------------~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 216 (391)
T 1l0q_A 153 ---------------TVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYV 216 (391)
T ss_dssp ---------------EEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEE
T ss_pred ---------------EEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEE
Confidence 00001 124678899999887 577889999999999887755443 23446789999999998
Q ss_pred EecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEE-EEecCCCcEEEEecCcccccccccc
Q psy10063 817 TTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY-ASGGEDGFVRLHTFDQAYFDYTFDI 885 (894)
Q Consensus 817 as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~L-aS~s~Dg~V~vWdl~~~~~~~~~~~ 885 (894)
+..+. ++..|++||+..++++..+..|. .+.+++|+|||++| ++++.|+.|+|||++.++++..+..
T Consensus 217 ~~~~~-~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~ 284 (391)
T 1l0q_A 217 TNVDK-YFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAV 284 (391)
T ss_dssp EEECS-SCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EecCc-CCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEEC
Confidence 88421 11169999999999998888875 47899999999877 6779999999999998888776654
No 87
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=289.19 Aligned_cols=273 Identities=9% Similarity=0.085 Sum_probs=214.9
Q ss_pred EEccCCCEEEEecCCCcEEEEecCCCeEEEEe-cCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec-CCCEEEE
Q psy10063 416 LWGNLDQYIITGHAKGDICTWDLRMGRELESI-SGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK-DATMFIT 493 (894)
Q Consensus 416 ~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l-~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp-dg~~L~s 493 (894)
.|+|+++.+++++ +|+ ..++++..+ .+|.+ .|.+|+|+| ++++|++
T Consensus 34 ~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~-------------------------~V~~~~~s~~~~~~l~s 81 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGN-LRGKLIATLMENEPN-------------------------SITSSAVSPGETPYLIT 81 (437)
T ss_dssp GGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTS-------------------------CEEEEEEECSSSCEEEE
T ss_pred hcCCccccccccc------ccc-ccceEEeeeccCCCC-------------------------ceEEEEECCCCCCEEEE
Confidence 3677888777765 488 558888888 78877 789999999 9999999
Q ss_pred EECCCCEEEEEcCC---Cc---EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc---ccc
Q psy10063 494 ASKDHTAKLFTTHD---RQ---LLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI---FEE 564 (894)
Q Consensus 494 gs~Dg~V~iwdl~~---~~---~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~---~~~ 564 (894)
|+.||.|+|||+.. +. +...+.|...|.+++|+|++.+|++++.++.+ ++||+. .++
T Consensus 82 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i--------------~vwd~~~~~~~~ 147 (437)
T 3gre_A 82 GSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQI--------------IVLKVNHYQQES 147 (437)
T ss_dssp EETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEE--------------EEEEEEEEEETT
T ss_pred ecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEE--------------EEEEeccccCCc
Confidence 99999999999876 33 45566788999999999999999999999984 555542 333
Q ss_pred eEE--------Ecc--C--CCCCeEEEE--EecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecC
Q psy10063 565 EFA--------RIK--G--HFGPINSLA--FHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQG 630 (894)
Q Consensus 565 ~~~--------~l~--~--h~~~V~~l~--~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~ 630 (894)
.+. .+. . +...+.++. +++++.+|++|+.||.|++||++.++.+
T Consensus 148 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~---------------------- 205 (437)
T 3gre_A 148 EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL---------------------- 205 (437)
T ss_dssp EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE----------------------
T ss_pred eeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee----------------------
Confidence 322 221 2 556777777 5578999999999999999998654311
Q ss_pred CeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeE
Q psy10063 631 GHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRM 710 (894)
Q Consensus 631 g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 710 (894)
T Consensus 206 -------------------------------------------------------------------------------- 205 (437)
T 3gre_A 206 -------------------------------------------------------------------------------- 205 (437)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecC--CCCceEEEeeCCCCCEEEEecCCCcEEEEE
Q psy10063 711 SINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAG--PVDIGFKMPEPPKREKLALALADKVSERYR 788 (894)
Q Consensus 711 ~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~--h~~~v~~la~spdg~~Latgs~Dg~I~iwd 788 (894)
..+.+ |.+.|.+++|+|++.+|++|+.||.|++||
T Consensus 206 -------------------------------------------~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 242 (437)
T 3gre_A 206 -------------------------------------------QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWD 242 (437)
T ss_dssp -------------------------------------------EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred -------------------------------------------EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 00111 556789999999999999999999999999
Q ss_pred ccCCceeeccccC----CCceE----eecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC-----------------
Q psy10063 789 DRKNKATAGFLLS----CPDFL----FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG----------------- 843 (894)
Q Consensus 789 ~~~~~~~~~~~~~----~~~~~----fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g----------------- 843 (894)
++.++.+..+... +..++ |++++.++++++.++ .|+|||+..++++..+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (437)
T 3gre_A 243 IRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT----FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL 318 (437)
T ss_dssp TTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTE----EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG
T ss_pred cCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCC----cEEEEEcCCCcEEEEEEcCCCCCccceeccccccc
Confidence 9998887655422 33553 456788899888887 699999999987766653
Q ss_pred ---------CCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccc
Q psy10063 844 ---------HFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFD 884 (894)
Q Consensus 844 ---------H~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~ 884 (894)
|...|.+|+|+ ++++|++|+.||.|+||++..++....+.
T Consensus 319 ~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 319 EELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp GGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred ccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEe
Confidence 55668899999 88999999999999999999988776664
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.4e-27 Score=269.92 Aligned_cols=271 Identities=13% Similarity=0.162 Sum_probs=212.3
Q ss_pred ceeeeeccCccEEEecCC-C-eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEE
Q psy10063 381 DRLNSMSPAARKLATNAE-P-VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDM 458 (894)
Q Consensus 381 ~~~~~~s~dg~~l~~~~~-~-~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v 458 (894)
..+++.+.||.+.+.... . ........|.+.|.+++|+|++++|++|+.||.|+|||+.+++.+..+.+|..
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------ 177 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQA------ 177 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS------
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCC------
Confidence 344455555555444322 2 22233334899999999999999999999999999999999999999999987
Q ss_pred EEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcC-CCcEEEEEe-CCCCeeEEEEcCCCCEEEEEE
Q psy10063 459 QFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH-DRQLLKTYT-TERPVNSAALSPILPHVVLGG 536 (894)
Q Consensus 459 ~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~-~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~ 536 (894)
.|.+++| ++.+|++|+.||.|++||++ .+..+..+. |...|.+++|+|++.+|++++
T Consensus 178 -------------------~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 236 (401)
T 4aez_A 178 -------------------RVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG 236 (401)
T ss_dssp -------------------CEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred -------------------ceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe
Confidence 6788888 46799999999999999999 456666665 568999999999999999999
Q ss_pred CCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEe--CCCcEEEEECCCCccccCCCc
Q psy10063 537 GQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGG--EDGFLISNTLSNGLDISEGSF 613 (894)
Q Consensus 537 ~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs--~Dg~I~vwdl~~~~~~~~~~~ 613 (894)
.++. |++||+..++.+..+.+|...|.+++|+|++. +|++++ .||.|++||+..++.+.
T Consensus 237 ~d~~--------------v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~---- 298 (401)
T 4aez_A 237 NDNV--------------VQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN---- 298 (401)
T ss_dssp TTSC--------------EEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE----
T ss_pred CCCe--------------EEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE----
Confidence 9997 89999999999999999999999999999775 555654 69999999986542110
Q ss_pred eeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcc
Q psy10063 614 TSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQ 693 (894)
Q Consensus 614 v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 693 (894)
T Consensus 299 -------------------------------------------------------------------------------- 298 (401)
T 4aez_A 299 -------------------------------------------------------------------------------- 298 (401)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC
Q psy10063 694 SVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE 773 (894)
Q Consensus 694 ~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~ 773 (894)
.+ .+...|.+++|+|++.
T Consensus 299 -------------------------------------------------------------~~-~~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 299 -------------------------------------------------------------TV-DAGSQVTSLIWSPHSK 316 (401)
T ss_dssp -------------------------------------------------------------EE-ECSSCEEEEEECSSSS
T ss_pred -------------------------------------------------------------EE-eCCCcEEEEEECCCCC
Confidence 00 0223578999999999
Q ss_pred EEEE--ecCCCcEEEEEccCCceee-----ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc
Q psy10063 774 KLAL--ALADKVSERYRDRKNKATA-----GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK 842 (894)
Q Consensus 774 ~Lat--gs~Dg~I~iwd~~~~~~~~-----~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~ 842 (894)
+|++ |+.|+.|+||++...+... .+...+..++|+++|.+|++++.|+ .|+||++..++++..+.
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg----~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDE----NLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTS----EEEEEECCC--------
T ss_pred eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCC----cEEEEECCCCccccccc
Confidence 9998 5589999999998855432 3445677889999999999999887 69999999998876554
No 89
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=3.6e-28 Score=260.44 Aligned_cols=290 Identities=11% Similarity=0.075 Sum_probs=192.5
Q ss_pred EEEEEEccCCC---EEEEecCCCcEEEEecCCC---eEEEEecCCCCCCeeEEEEcCCCCE-EEEEeCCCCccceEEEEE
Q psy10063 412 ITSLLWGNLDQ---YIITGHAKGDICTWDLRMG---RELESISGHAKEPINDMQFSKDATM-FITASHSQAVEPINDMQF 484 (894)
Q Consensus 412 V~~l~~spdg~---~L~sgs~Dg~I~iWd~~tg---~~~~~l~~h~~~~V~~v~~spdg~~-la~~~~d~~i~~V~~l~~ 484 (894)
|.++.|-..|- .|+++++ ..|++|+...+ ++++.+.+|+. +|..|+|.||..- +.++-..-.++.|.+|+|
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEV-PVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSS-CEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCc-eeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 55666654433 6677775 58999999999 89999999998 9999999998654 445555666789999999
Q ss_pred ecC----CCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063 485 SKD----ATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY 558 (894)
Q Consensus 485 spd----g~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw 558 (894)
+|| ++++++++.+ ++||++.+++++.... |...|..++|+|+
T Consensus 120 spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~d------------------------------ 167 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFAED------------------------------ 167 (356)
T ss_dssp ------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEECTT------------------------------
T ss_pred CCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEECCC------------------------------
Confidence 999 9999998844 8889876666555432 2344444444444
Q ss_pred eccccceEEEccCCCCCeEEEEEec---CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063 559 HLIFEEEFARIKGHFGPINSLAFHP---DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS 635 (894)
Q Consensus 559 d~~~~~~~~~l~~h~~~V~~l~~sp---dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~ 635 (894)
|+.+..+.+|...+..++|++ ++.+|++++.|+.|+|||+++++.+. .
T Consensus 168 ----G~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~-------------------------t 218 (356)
T 2w18_A 168 ----GGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLK-------------------------K 218 (356)
T ss_dssp ----SCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEE-------------------------E
T ss_pred ----CceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEE-------------------------E
Confidence 455555668888999999999 77999999999999999998875331 0
Q ss_pred EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063 636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS 715 (894)
Q Consensus 636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~ 715 (894)
+..+.. .......++|+++
T Consensus 219 L~g~~~-------------------------------------------------------------~v~~v~~vafSpd 237 (356)
T 2w18_A 219 MHIDDS-------------------------------------------------------------YQASVCHKAYSEM 237 (356)
T ss_dssp EECCC----------------------------------------------------------------CCCEEEEEEET
T ss_pred EcCCCc-------------------------------------------------------------ceeeeEEEEECCC
Confidence 100000 0000000122222
Q ss_pred CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCCce
Q psy10063 716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKNKA 794 (894)
Q Consensus 716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~~ 794 (894)
|..++... .++ ...|++|+.|++|++|+...++.
T Consensus 238 G~~lvs~s---------------------------------------------~~~~~w~laSGs~D~tIklWd~~tgk~ 272 (356)
T 2w18_A 238 GLLFIVLS---------------------------------------------HPCAKESESLRSPVFQLIVINPKTTLS 272 (356)
T ss_dssp TEEEEEEC---------------------------------------------------------CCEEEEEEETTTTEE
T ss_pred CCEEEEec---------------------------------------------cCCCcceeeccCCCcEEEEEECCCCEE
Confidence 22111100 000 12467899999999999998887
Q ss_pred eeccc----cCCC--ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCee-EEEEeeCCcEEEEecCCC
Q psy10063 795 TAGFL----LSCP--DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN-SLAFHPDGKSYASGGEDG 867 (894)
Q Consensus 795 ~~~~~----~~~~--~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~-~l~fSpdg~~LaS~s~Dg 867 (894)
+..+. .++. .+..+.++..+++++.|+ .|+|||+.+|+++..|.+|...|. +|+|||||++|++|+.|+
T Consensus 273 l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~Dg----TIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 273 VGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSG----TIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp EEEEEECCCTTCCCCEEEEEEETTEEEEEETTS----CEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTS
T ss_pred EEEEEeeccCCCcceeEccccCCCEEEEEcCCC----cEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCC
Confidence 54331 2222 222344467788888887 699999999999999999988765 589999999999999999
Q ss_pred cEEEEec
Q psy10063 868 FVRLHTF 874 (894)
Q Consensus 868 ~V~vWdl 874 (894)
.|||||+
T Consensus 349 TIklWd~ 355 (356)
T 2w18_A 349 NIFVYHY 355 (356)
T ss_dssp CEEEEEE
T ss_pred cEEEecC
Confidence 9999996
No 90
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=1.6e-28 Score=276.30 Aligned_cols=280 Identities=12% Similarity=0.043 Sum_probs=217.6
Q ss_pred ceeeeeccCccEEEecCCC-e------EEEEEecCCCCEEEEEEccC----C---CEEEEecCCCcEEEEecCCCeE---
Q psy10063 381 DRLNSMSPAARKLATNAEP-V------VKMQVTDQSAKITSLLWGNL----D---QYIITGHAKGDICTWDLRMGRE--- 443 (894)
Q Consensus 381 ~~~~~~s~dg~~l~~~~~~-~------~~~~l~~H~~~V~~l~~spd----g---~~L~sgs~Dg~I~iWd~~tg~~--- 443 (894)
..+...+.||.+.+..... . ....+.+|...|.+++|+|+ | ++|++++.||.|+|||+..++.
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 106 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK 106 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc
Confidence 4555556666655544332 2 35577899999999999999 9 9999999999999999998886
Q ss_pred --EEEecCCC-----CCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe----cCCCE-EEEEECCCCEEEEEcCC----
Q psy10063 444 --LESISGHA-----KEPINDMQFSKDATMFITASHSQAVEPINDMQFS----KDATM-FITASKDHTAKLFTTHD---- 507 (894)
Q Consensus 444 --~~~l~~h~-----~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s----pdg~~-L~sgs~Dg~V~iwdl~~---- 507 (894)
+..+..|. . .|.+++|+ |++.+ |++++.||.|++||++.
T Consensus 107 ~~~~~~~~~~~~~~~~-------------------------~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 107 VIFEKLDLLDSDMKKH-------------------------SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEEECCSCTTGGGS-------------------------CEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred ccceeecccccccCCC-------------------------cEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 78888884 4 68888888 89999 99999999999999998
Q ss_pred --CcEEE-----EEe--------CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC-
Q psy10063 508 --RQLLK-----TYT--------TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG- 571 (894)
Q Consensus 508 --~~~~~-----~~~--------~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~- 571 (894)
++.+. .+. +...|.+++|+|++ +|++++.++. |++||++.++.+..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~--------------i~i~d~~~~~~~~~~~~~ 226 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGT--------------VQISELSTLRPLYNFESQ 226 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSE--------------EEEEETTTTEEEEEEECC
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCc--------------EEEEECCCCceeEEEecc
Confidence 66655 553 46789999999999 9999988886 89999999999999988
Q ss_pred --C---CCCeEEEEEecCCCEEEEEeCC---CcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC
Q psy10063 572 --H---FGPINSLAFHPDGKSYASGGED---GFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS 643 (894)
Q Consensus 572 --h---~~~V~~l~~spdg~~l~sgs~D---g~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~ 643 (894)
| ...|.+++|+|++++|++++.| |.|++||++.++.+ ..+......
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~-------------------------~~~~~~~~~- 280 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI-------------------------GSLSVPTHS- 280 (397)
T ss_dssp C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE-------------------------EEECBC----
T ss_pred ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc-------------------------ceeccCccc-
Confidence 9 9999999999999999999999 99999999764321 000000000
Q ss_pred CCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecc
Q psy10063 644 TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNP 723 (894)
Q Consensus 644 ~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~ 723 (894)
T Consensus 281 -------------------------------------------------------------------------------- 280 (397)
T 1sq9_A 281 -------------------------------------------------------------------------------- 280 (397)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc----
Q psy10063 724 FDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL---- 799 (894)
Q Consensus 724 ~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~---- 799 (894)
.........|...|.+++|+|++++|++++.|+.|+|||+..++.+..+.
T Consensus 281 --------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 334 (397)
T 1sq9_A 281 --------------------------SQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCD 334 (397)
T ss_dssp -------------------------------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGG
T ss_pred --------------------------ccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccC
Confidence 00000011366789999999999999999999999999999888765544
Q ss_pred --------------------cCCCceEeecCC----------CeEEEEecCCCCceeEEEeecCCcc
Q psy10063 800 --------------------LSCPDFLFDFDT----------TREVTTTSTKVGKFDARFYHLIFEE 836 (894)
Q Consensus 800 --------------------~~~~~~~fS~dg----------~~l~~as~d~~g~~~I~vwd~~tg~ 836 (894)
..+..++|++++ .++++++.++ .|+||++++|+
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg----~i~iw~~~~g~ 397 (397)
T 1sq9_A 335 DIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR----SIRWFREAGGK 397 (397)
T ss_dssp GCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT----EEEEEEEEC--
T ss_pred cccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC----cEEEEEcCCCC
Confidence 234577899999 6888888887 69999998764
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=2.5e-28 Score=269.82 Aligned_cols=213 Identities=15% Similarity=0.231 Sum_probs=177.1
Q ss_pred ccceeeeeccCccEEE-ecC----CCeEE-----------EEEecCCCCEEEEEEccC---CCEEEEecCCCcEEEEecC
Q psy10063 379 SVDRLNSMSPAARKLA-TNA----EPVVK-----------MQVTDQSAKITSLLWGNL---DQYIITGHAKGDICTWDLR 439 (894)
Q Consensus 379 ~~~~~~~~s~dg~~l~-~~~----~~~~~-----------~~l~~H~~~V~~l~~spd---g~~L~sgs~Dg~I~iWd~~ 439 (894)
.....++|+|+|..|+ .+. +..++ ....+|...|.+++|+|+ |++|++|+.||.|+|||+.
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 98 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLE 98 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTT
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCC
Confidence 3445567777775443 332 22222 234479999999999998 6999999999999999999
Q ss_pred CCe-EEEEecCCCCCCeeEEEE------cCCCCEEEEEeCCCCc-----------------------cceEEEE----Ee
Q psy10063 440 MGR-ELESISGHAKEPINDMQF------SKDATMFITASHSQAV-----------------------EPINDMQ----FS 485 (894)
Q Consensus 440 tg~-~~~~l~~h~~~~V~~v~~------spdg~~la~~~~d~~i-----------------------~~V~~l~----~s 485 (894)
.++ .+..+.+|.. .|.+++| ++++++|++++.|+.+ ..|.+++ |+
T Consensus 99 ~~~~~~~~~~~~~~-~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 177 (357)
T 3i2n_A 99 APEMPVYSVKGHKE-IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYN 177 (357)
T ss_dssp SCSSCSEEECCCSS-CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC
T ss_pred CCCccEEEEEeccc-ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccC
Confidence 988 8899999998 9999954 6899999999999876 1677888 67
Q ss_pred cCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcC---CCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063 486 KDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSP---ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF 562 (894)
Q Consensus 486 pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~sp---dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~ 562 (894)
+++.+|++++.||.|++||++.++++....+...|.+++|+| ++.+|++++.++. |++||++.
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~--------------i~i~d~~~ 243 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK--------------FHVFDMRT 243 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE--------------EEEEEEEE
T ss_pred CCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe--------------EEEEeCcC
Confidence 899999999999999999999999988888889999999999 9999999999997 77888776
Q ss_pred cceEEEc-----cCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCc
Q psy10063 563 EEEFARI-----KGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 563 ~~~~~~l-----~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~ 606 (894)
++.+..+ .+|...|.+++|+|+++ +|++++.||.|++||++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 244 QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 6654444 38999999999999998 89999999999999987543
No 92
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=6.5e-28 Score=268.17 Aligned_cols=294 Identities=8% Similarity=0.042 Sum_probs=213.0
Q ss_pred EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063 404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ 483 (894)
Q Consensus 404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~ 483 (894)
.+.+|.+.|.+|+|+|||++|++|+.|+ ++||++..++.+.....+ .+..++
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~---------------------------~~~~~~ 65 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR---------------------------HLSKVR 65 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS---------------------------CCCEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC---------------------------CeEEEE
Confidence 4578999999999999999999998775 789999987766554322 245566
Q ss_pred EecCCCEE-EEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063 484 FSKDATMF-ITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF 562 (894)
Q Consensus 484 ~spdg~~L-~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~ 562 (894)
|.+++.++ ++++.|+.|+|||+++++++..+.+...|.+++|++++ ++++. ++. |++||+..
T Consensus 66 ~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~-~~~--------------i~i~d~~~ 128 (355)
T 3vu4_A 66 MLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVSY-GDV--------------ISVFKFGN 128 (355)
T ss_dssp ECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEEE-TTE--------------EEEEESST
T ss_pred EcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEEE-cCE--------------EEEEECCC
Confidence 66666666 55777899999999999999999998999999999863 44444 443 88999988
Q ss_pred c-ceEEEccCCCCCeEEEEEecCCCEEEE--EeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063 563 E-EEFARIKGHFGPINSLAFHPDGKSYAS--GGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSH 639 (894)
Q Consensus 563 ~-~~~~~l~~h~~~V~~l~~spdg~~l~s--gs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~ 639 (894)
+ +.+..+.. ....+++++ .+|+. |+.||.|++||+..+......+
T Consensus 129 ~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~--------------------------- 176 (355)
T 3vu4_A 129 PWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQD--------------------------- 176 (355)
T ss_dssp TCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC-----------------------------------
T ss_pred CceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCcccccc---------------------------
Confidence 7 66655544 444566666 56665 5789999999997643110000
Q ss_pred cCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063 640 STSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL 719 (894)
Q Consensus 640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l 719 (894)
.... .
T Consensus 177 ------------------~~~~---------------------------------------~------------------ 181 (355)
T 3vu4_A 177 ------------------QGVQ---------------------------------------Q------------------ 181 (355)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------cccc---------------------------------------c------------------
Confidence 0000 0
Q ss_pred EecccCccccccCCcceeeccccCcccccCCCC-cceecCCCCceEEEeeCCCCCEEEEecCCCc-EEEEEccCCceeec
Q psy10063 720 HVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSD-TPILAGPVDIGFKMPEPPKREKLALALADKV-SERYRDRKNKATAG 797 (894)
Q Consensus 720 ~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~-~~~~~~h~~~v~~la~spdg~~Latgs~Dg~-I~iwd~~~~~~~~~ 797 (894)
..... ...+.+|.+.|.+++|+|++++||+|+.|+. |+|||+++++.+..
T Consensus 182 ----------------------------~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 182 ----------------------------KAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp ---------------------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred ----------------------------cccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 00000 2345679999999999999999999999998 99999999888665
Q ss_pred cc-----cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCccee--eecc---------------------CCCCCee
Q psy10063 798 FL-----LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEF--ARIK---------------------GHFGPIN 849 (894)
Q Consensus 798 ~~-----~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l--~~l~---------------------gH~~~V~ 849 (894)
+. ..+..++|+|+|++|++++.|+ .|+|||+..+... ..+. .+...+.
T Consensus 234 ~~~g~h~~~v~~~~~s~~~~~l~s~s~d~----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTDGSKLAVVSDKW----TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC 309 (355)
T ss_dssp EECTTCCSCEEEEEECTTSCEEEEEETTC----EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred EEcCCCCCcEEEEEECCCCCEEEEEECCC----EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence 54 3345788999999999999987 6999999765321 1111 1122346
Q ss_pred EEEEeeCCcEEEEecCCCcEEEEecCcccccc
Q psy10063 850 SLAFHPDGKSYASGGEDGFVRLHTFDQAYFDY 881 (894)
Q Consensus 850 ~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~ 881 (894)
.++|++||++|++++.||.+++|++..++...
T Consensus 310 ~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~~ 341 (355)
T 3vu4_A 310 KIAWISESSLVVVWPHTRMIETFKVVFDDEME 341 (355)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEEEEETTTT
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEEEEcCCCCc
Confidence 79999999999999999999999987655433
No 93
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=2.5e-27 Score=272.92 Aligned_cols=295 Identities=14% Similarity=0.121 Sum_probs=216.1
Q ss_pred eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063 479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF 557 (894)
Q Consensus 479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v 557 (894)
+.++.| ++.+|++|+.||.|+|||+.+++++..+. |.+.|.+++|++++ +|++++.++. |++
T Consensus 125 ~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~--------------i~v 187 (464)
T 3v7d_B 125 ITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRT--------------VRV 187 (464)
T ss_dssp EEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSC--------------EEE
T ss_pred EEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCC--------------EEE
Confidence 455555 46799999999999999999999999988 56899999999988 9999999997 899
Q ss_pred EeccccceEEEccCCCCCeEEEEEe--cCCCEEEEEeCCCcEEEEECCCCccccCCC---ceeeeEECcCCc--EEEecC
Q psy10063 558 YHLIFEEEFARIKGHFGPINSLAFH--PDGKSYASGGEDGFLISNTLSNGLDISEGS---FTSSSTQQPDGL--VYPSQG 630 (894)
Q Consensus 558 wd~~~~~~~~~l~~h~~~V~~l~~s--pdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~---~v~~~~~spdg~--~l~~~~ 630 (894)
||++.++.+..+.+|...|.+++|+ +++.+|++|+.||.|++||+..+....... ....+.+.+.+. .+....
T Consensus 188 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 188 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred EECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 9999999999999999999999999 578899999999999999998765432110 000011111100 000000
Q ss_pred CeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeE
Q psy10063 631 GHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRM 710 (894)
Q Consensus 631 g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 710 (894)
+ +.+.. .
T Consensus 268 ~-----------------------------------------------~~~~v--------------------------~ 274 (464)
T 3v7d_B 268 G-----------------------------------------------HMASV--------------------------R 274 (464)
T ss_dssp C-----------------------------------------------CSSCE--------------------------E
T ss_pred C-----------------------------------------------ccceE--------------------------E
Confidence 0 00000 0
Q ss_pred EEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEcc
Q psy10063 711 SINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDR 790 (894)
Q Consensus 711 ~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~ 790 (894)
.+.+++..++.+..++ .+.+|+...+ +....+.+|...|.+++|+|++.+|++|+.|+.|++||++
T Consensus 275 ~~~~~~~~l~~~~~d~-------~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDN-------TLIVWDVAQM-------KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp EEEEETTEEEEEETTS-------CEEEEETTTT-------EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred EEcCCCCEEEEEeCCC-------eEEEEECCCC-------cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 1122333333333222 2445543322 2233566789999999999999999999999999999999
Q ss_pred CCceeeccccCCC-ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063 791 KNKATAGFLLSCP-DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFV 869 (894)
Q Consensus 791 ~~~~~~~~~~~~~-~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V 869 (894)
.++.+..+..... ..++..++.++++++.|+ .|++||+..++....+ .|...+..++|++++++|++++ ||.|
T Consensus 341 ~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg----~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i 414 (464)
T 3v7d_B 341 NGELMYTLQGHTALVGLLRLSDKFLVSAAADG----SIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQF 414 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSEEEEEETTS----EEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEE
T ss_pred CCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCC----cEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeE
Confidence 9887766543322 223455689999999987 6999999988766555 3677888999999999999998 8999
Q ss_pred EEEecCcccccccc
Q psy10063 870 RLHTFDQAYFDYTF 883 (894)
Q Consensus 870 ~vWdl~~~~~~~~~ 883 (894)
+||+++.++++..+
T Consensus 415 ~iwd~~~g~~~~~~ 428 (464)
T 3v7d_B 415 NIYNLRSGKLVHAN 428 (464)
T ss_dssp EEEETTTCCEEESC
T ss_pred EEEECCCCcEEehh
Confidence 99999999888763
No 94
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=9.4e-27 Score=255.49 Aligned_cols=278 Identities=18% Similarity=0.252 Sum_probs=208.8
Q ss_pred CCccceeeeeccC-ccEEEecCCC-eE---------------EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecC
Q psy10063 377 PLSVDRLNSMSPA-ARKLATNAEP-VV---------------KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLR 439 (894)
Q Consensus 377 ~~~~~~~~~~s~d-g~~l~~~~~~-~~---------------~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~ 439 (894)
+......++|+|+ +++|+.++.+ .+ ...+.+|...|.+++|+|+|++|++|+.|+.|++|+..
T Consensus 37 H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~ 116 (340)
T 4aow_A 37 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT 116 (340)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeec
Confidence 4445566678876 5677765442 22 23567899999999999999999999999999999999
Q ss_pred CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CC
Q psy10063 440 MGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--TE 517 (894)
Q Consensus 440 tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~ 517 (894)
.+.....+..+.. .+..+.+++++.+|++++.|+.+++||+.......... +.
T Consensus 117 ~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~ 171 (340)
T 4aow_A 117 TGTTTRRFVGHTK-------------------------DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHS 171 (340)
T ss_dssp TTEEEEEEECCSS-------------------------CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCS
T ss_pred ccceeeeecCCCC-------------------------ceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEecccc
Confidence 9998888887776 67778888899999999999999999998765544332 35
Q ss_pred CCeeEEEEcCCC--CEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063 518 RPVNSAALSPIL--PHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG 595 (894)
Q Consensus 518 ~~v~~l~~spdg--~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg 595 (894)
..+.+++|++++ .++++++.++. |++||++.++.+..+.+|.+.|.+|+|+|++++|++|+.||
T Consensus 172 ~~v~~~~~~~~~~~~~~~s~~~d~~--------------i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 172 EWVSCVRFSPNSSNPIIVSCGWDKL--------------VKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSC--------------EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred CcccceEEccCCCCcEEEEEcCCCE--------------EEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 789999999875 46778888886 89999999999999999999999999999999999999999
Q ss_pred cEEEEECCCCcccc---CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhh
Q psy10063 596 FLISNTLSNGLDIS---EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMAR 672 (894)
Q Consensus 596 ~I~vwdl~~~~~~~---~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~ 672 (894)
.|++||++..+.+. ....+..+.|+|++.++ .++ .++.|++|+......
T Consensus 238 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~------------------------~~~--~d~~i~iwd~~~~~~-- 289 (340)
T 4aow_A 238 QAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL------------------------CAA--TGPSIKIWDLEGKII-- 289 (340)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE------------------------EEE--ETTEEEEEETTTTEE--
T ss_pred eEEEEEeccCceeeeecCCceEEeeecCCCCcee------------------------ecc--CCCEEEEEECCCCeE--
Confidence 99999998876442 23344555555554433 222 245555554221000
Q ss_pred hcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccC-CC
Q psy10063 673 NRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLD-GS 751 (894)
Q Consensus 673 ~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~d-g~ 751 (894)
+ . ... ..
T Consensus 290 ----------------------~----------~----------------------------------------~~~~~~ 297 (340)
T 4aow_A 290 ----------------------V----------D----------------------------------------ELKQEV 297 (340)
T ss_dssp ----------------------E----------E----------------------------------------EECCC-
T ss_pred ----------------------E----------E----------------------------------------eccccc
Confidence 0 0 000 00
Q ss_pred CcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCc
Q psy10063 752 DTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNK 793 (894)
Q Consensus 752 ~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~ 793 (894)
......+|...|.+++|+|++++||+|+.||.|+|||+.++.
T Consensus 298 ~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 298 ISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 011234688899999999999999999999999999988764
No 95
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=8.5e-29 Score=276.77 Aligned_cols=239 Identities=14% Similarity=0.099 Sum_probs=192.0
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCC--cEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDR--QLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD 554 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~--~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~ 554 (894)
.|.+++|+|+|++|++|+.|+.|+|||+..+ +++..+. |...|.+++|+|++++|++++.++.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~-------------- 78 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRN-------------- 78 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSS--------------
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCe--------------
Confidence 6899999999999999999999999999988 6666666 4688999999999999999999997
Q ss_pred EEEEeccccc---eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063 555 ARFYHLIFEE---EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG 631 (894)
Q Consensus 555 v~vwd~~~~~---~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g 631 (894)
|++||+..++ .+..+.+|...|.+++|+|++++|++++.|+.|++||++.++...
T Consensus 79 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---------------------- 136 (377)
T 3dwl_C 79 AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW---------------------- 136 (377)
T ss_dssp EEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CC----------------------
T ss_pred EEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccce----------------------
Confidence 8889988876 677788999999999999999999999999999999986532100
Q ss_pred eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063 632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS 711 (894)
Q Consensus 632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 711 (894)
T Consensus 137 -------------------------------------------------------------------------------- 136 (377)
T 3dwl_C 137 -------------------------------------------------------------------------------- 136 (377)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecC-CCCceEEEeeCCCCCEEEEecCCCcEEEEEcc
Q psy10063 712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAG-PVDIGFKMPEPPKREKLALALADKVSERYRDR 790 (894)
Q Consensus 712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~-h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~ 790 (894)
....+.+ |...|.+++|+|++++|++++.|+.|++||+.
T Consensus 137 ----------------------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 137 ----------------------------------------VSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp ----------------------------------------CCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred ----------------------------------------eeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 0001223 77789999999999999999999999999985
Q ss_pred C------------------Cceeec--cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcce----eeeccCCCC
Q psy10063 791 K------------------NKATAG--FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE----FARIKGHFG 846 (894)
Q Consensus 791 ~------------------~~~~~~--~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~----l~~l~gH~~ 846 (894)
. ++.+.. +...+..++|+|++++|++++.++ .|+|||+..+++ +..+.+|..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~ 252 (377)
T 3dwl_C 177 VRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDS----SVTIAYPSAPEQPPRALITVKLSQL 252 (377)
T ss_dssp CSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTT----EEC-CEECSTTSCEEECCCEECSSS
T ss_pred ecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCC----cEEEEECCCCCCcceeeEeecCCCC
Confidence 2 222332 233345778999999999999887 699999999988 888999999
Q ss_pred CeeEEEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063 847 PINSLAFHPDGKSYASGGEDGFVRLHTFDQA 877 (894)
Q Consensus 847 ~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~ 877 (894)
.|.+|+|+|||++|++++.|+.+ +|+....
T Consensus 253 ~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~ 282 (377)
T 3dwl_C 253 PLRSLLWANESAIVAAGYNYSPI-LLQGNES 282 (377)
T ss_dssp CEEEEEEEETTEEEEEESSSSEE-EECCCC-
T ss_pred ceEEEEEcCCCCEEEEEcCCcEE-EEEeCCC
Confidence 99999999999999999877766 6666533
No 96
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=6.1e-28 Score=275.73 Aligned_cols=267 Identities=16% Similarity=0.146 Sum_probs=213.9
Q ss_pred EEEEecCCCCEEEEEEccC-CCEEEEecCCCcEEEEecCC----------CeEEEEecCCCCCCeeEEEEcCCCCEEEEE
Q psy10063 402 KMQVTDQSAKITSLLWGNL-DQYIITGHAKGDICTWDLRM----------GRELESISGHAKEPINDMQFSKDATMFITA 470 (894)
Q Consensus 402 ~~~l~~H~~~V~~l~~spd-g~~L~sgs~Dg~I~iWd~~t----------g~~~~~l~~h~~~~V~~v~~spdg~~la~~ 470 (894)
...+.+|.+.|.+|+|+|+ +.+|++|+.||.|+|||+.. ++.+..+.+|..
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~------------------ 182 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK------------------ 182 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS------------------
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCC------------------
Confidence 3567789999999999997 67999999999999999986 566777888877
Q ss_pred eCCCCccceEEEEEecCCC-EEEEEECCCCEEEEEcCCCcE-------EEEEe-CCCCeeEEEEcC-CCCEEEEEECCCC
Q psy10063 471 SHSQAVEPINDMQFSKDAT-MFITASKDHTAKLFTTHDRQL-------LKTYT-TERPVNSAALSP-ILPHVVLGGGQEA 540 (894)
Q Consensus 471 ~~d~~i~~V~~l~~spdg~-~L~sgs~Dg~V~iwdl~~~~~-------~~~~~-~~~~v~~l~~sp-dg~~l~~~~~~~~ 540 (894)
.|.+|+|+|++. +|++|+.||.|+|||+..+.. ...+. |...|.+++|+| ++.+|++++.++.
T Consensus 183 -------~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~ 255 (430)
T 2xyi_A 183 -------EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQK 255 (430)
T ss_dssp -------CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred -------CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCe
Confidence 788888888887 999999999999999987422 33443 567899999999 6778888888886
Q ss_pred eEEEeccCccceeeEEEEecccc---ceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceee
Q psy10063 541 REVTTTSTKVGKFDARFYHLIFE---EEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSS 616 (894)
Q Consensus 541 ~~v~~~~~~~~~~~v~vwd~~~~---~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~ 616 (894)
|++||++.+ +.+..+..|...|.+|+|+|+++ +|++|+.||.|++||++....
T Consensus 256 --------------i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~--------- 312 (430)
T 2xyi_A 256 --------------LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL--------- 312 (430)
T ss_dssp --------------EEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS---------
T ss_pred --------------EEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC---------
Confidence 889999876 57777889999999999999987 688999999999999864210
Q ss_pred eEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeE
Q psy10063 617 STQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVE 696 (894)
Q Consensus 617 ~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 696 (894)
T Consensus 313 -------------------------------------------------------------------------------- 312 (430)
T 2xyi_A 313 -------------------------------------------------------------------------------- 312 (430)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC-EE
Q psy10063 697 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE-KL 775 (894)
Q Consensus 697 ~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~-~L 775 (894)
.+..+.+|...|.+|+|+|+++ +|
T Consensus 313 -------------------------------------------------------~~~~~~~h~~~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 313 -------------------------------------------------------KLHSFESHKDEIFQVQWSPHNETIL 337 (430)
T ss_dssp -------------------------------------------------------CSEEEECCSSCEEEEEECSSCTTEE
T ss_pred -------------------------------------------------------CeEEeecCCCCEEEEEECCCCCCEE
Confidence 0012334677899999999985 68
Q ss_pred EEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee
Q psy10063 776 ALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP 855 (894)
Q Consensus 776 atgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp 855 (894)
++++.|+.|+|||+........... ..+ ...+++..+.+|...|.+++|+|
T Consensus 338 ~s~~~d~~i~iwd~~~~~~~~~~~~-----------------~~~------------~~~~~~~~~~~h~~~v~~~~~~p 388 (430)
T 2xyi_A 338 ASSGTDRRLHVWDLSKIGEEQSTED-----------------AED------------GPPELLFIHGGHTAKISDFSWNP 388 (430)
T ss_dssp EEEETTSCCEEEEGGGTTCCCCHHH-----------------HHH------------CCTTEEEECCCCSSCEEEEEECS
T ss_pred EEEeCCCcEEEEeCCCCccccCccc-----------------ccc------------CCcceEEEcCCCCCCceEEEECC
Confidence 9999999999999876332110000 000 01355667789999999999999
Q ss_pred CCc-EEEEecCCCcEEEEecCccccc
Q psy10063 856 DGK-SYASGGEDGFVRLHTFDQAYFD 880 (894)
Q Consensus 856 dg~-~LaS~s~Dg~V~vWdl~~~~~~ 880 (894)
+++ +|++++.||.|+||++....+.
T Consensus 389 ~~~~~l~s~s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 389 NEPWIICSVSEDNIMQVWQMAENVYN 414 (430)
T ss_dssp SSTTEEEEEETTSEEEEEEECHHHHC
T ss_pred CCCCEEEEEECCCCEEEeEccccccc
Confidence 999 8999999999999999877554
No 97
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.5e-27 Score=270.07 Aligned_cols=281 Identities=11% Similarity=0.054 Sum_probs=225.7
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE-----ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063 409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES-----ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ 483 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~-----l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~ 483 (894)
...+.+++|+|+++++++++.|+.|++||+.+++.++. +.+|.. .|.+++
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~-------------------------~v~~~~ 176 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLG-------------------------FVETIS 176 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCC-------------------------EEEEEE
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCC-------------------------ceeEEE
Confidence 35567999999888888888999999999999998873 345665 788889
Q ss_pred EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEEC-CCCeEEEeccCccceeeEEEEecc
Q psy10063 484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGG-QEAREVTTTSTKVGKFDARFYHLI 561 (894)
Q Consensus 484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~-~~~~~v~~~~~~~~~~~v~vwd~~ 561 (894)
|++++.+|++++.|+.|++||++.++++..+.. ...+.+++|+|++++|++++. ++. |++||++
T Consensus 177 ~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------i~~~d~~ 242 (433)
T 3bws_A 177 IPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISED--------------ISVIDRK 242 (433)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTE--------------EEEEETT
T ss_pred EcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCc--------------EEEEECC
Confidence 988999999999999999999999999988874 678999999999999987774 554 8999999
Q ss_pred ccceEEEccCCCCCeEEEEEecCCCEEEEEe--------CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeE
Q psy10063 562 FEEEFARIKGHFGPINSLAFHPDGKSYASGG--------EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHI 633 (894)
Q Consensus 562 ~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs--------~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i 633 (894)
.++.+..+..+ ..+.+++|+|+|++|++++ .||.|++||+..++.+.
T Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~------------------------ 297 (433)
T 3bws_A 243 TKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLID------------------------ 297 (433)
T ss_dssp TTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE------------------------
T ss_pred CCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEe------------------------
Confidence 99988888765 4599999999999999888 58899999986542100
Q ss_pred EEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEc
Q psy10063 634 HSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSIN 713 (894)
Q Consensus 634 ~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s 713 (894)
.
T Consensus 298 -~------------------------------------------------------------------------------ 298 (433)
T 3bws_A 298 -T------------------------------------------------------------------------------ 298 (433)
T ss_dssp -E------------------------------------------------------------------------------
T ss_pred -e------------------------------------------------------------------------------
Confidence 0
Q ss_pred CCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEE-EEecCCCcEEEEEccCC
Q psy10063 714 HSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKL-ALALADKVSERYRDRKN 792 (894)
Q Consensus 714 ~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~L-atgs~Dg~I~iwd~~~~ 792 (894)
..|...+.+++|+|++++| ++++.|+.|++||+..+
T Consensus 299 -------------------------------------------~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 299 -------------------------------------------IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp -------------------------------------------EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT
T ss_pred -------------------------------------------ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC
Confidence 0011135578899999755 56689999999999988
Q ss_pred ceeeccc--cCCCceEeecCCCeEEEEecCCCC-----------ceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcE
Q psy10063 793 KATAGFL--LSCPDFLFDFDTTREVTTTSTKVG-----------KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKS 859 (894)
Q Consensus 793 ~~~~~~~--~~~~~~~fS~dg~~l~~as~d~~g-----------~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~ 859 (894)
+.+..+. .....++|+++|++++++..+... +..|++||+.+++++..+.++ ..+.+++|+|||++
T Consensus 336 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~ 414 (433)
T 3bws_A 336 KVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRY 414 (433)
T ss_dssp EEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCE
T ss_pred cEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCE
Confidence 7755443 334578899999999888764310 126999999999999888764 57899999999999
Q ss_pred EEEec-CCCcEEEEecCc
Q psy10063 860 YASGG-EDGFVRLHTFDQ 876 (894)
Q Consensus 860 LaS~s-~Dg~V~vWdl~~ 876 (894)
|++++ .|+.|+||++++
T Consensus 415 l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 415 LVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEETTTTEEEEEEETT
T ss_pred EEEEECCCCeEEEEEecC
Confidence 98876 499999999874
No 98
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=4.8e-28 Score=271.55 Aligned_cols=260 Identities=12% Similarity=0.018 Sum_probs=211.5
Q ss_pred EEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC-CEEEEEECCCCEEEEEcCCCcEEE
Q psy10063 434 CTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA-TMFITASKDHTAKLFTTHDRQLLK 512 (894)
Q Consensus 434 ~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg-~~L~sgs~Dg~V~iwdl~~~~~~~ 512 (894)
.+|++...+.++.+.+|.. .|.+++|+|++ ++|++|+.||.|+|||+..++...
T Consensus 56 ~~~~~~~~~~~~~~~~h~~-------------------------~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 110 (383)
T 3ei3_B 56 FIRSLKSYKLHRTASPFDR-------------------------RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTS 110 (383)
T ss_dssp HHHHHTTCEEEEEECCCSS-------------------------CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEE
T ss_pred ccccccccceEEeccCCCC-------------------------CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccce
Confidence 4566677788888888887 78888899988 899999999999999999998888
Q ss_pred EEe---CCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC---CCCCeEEEEEecCC
Q psy10063 513 TYT---TERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG---HFGPINSLAFHPDG 585 (894)
Q Consensus 513 ~~~---~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~---h~~~V~~l~~spdg 585 (894)
.+. |...|.+++|+| ++.+|++++.++. |++||+.. ..+..+.. |...|.+++|+|++
T Consensus 111 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~--------------i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~ 175 (383)
T 3ei3_B 111 FIQGMGPGDAITGMKFNQFNTNQLFVSSIRGA--------------TTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSR 175 (383)
T ss_dssp EECCCSTTCBEEEEEEETTEEEEEEEEETTTE--------------EEEEETTS-CEEEEEECCCCSSCCEEEEEEETTT
T ss_pred eeecCCcCCceeEEEeCCCCCCEEEEEeCCCE--------------EEEEECCC-CceEEEeccCCCCCCeEEEEECCCC
Confidence 776 568999999999 7799999999987 88888884 55555544 44789999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEech
Q psy10063 586 KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKD 665 (894)
Q Consensus 586 ~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~ 665 (894)
++|++|+.||.|++||++.. .+
T Consensus 176 ~~l~~~~~d~~i~i~d~~~~-~~--------------------------------------------------------- 197 (383)
T 3ei3_B 176 QMLATGDSTGRLLLLGLDGH-EI--------------------------------------------------------- 197 (383)
T ss_dssp TEEEEEETTSEEEEEETTSC-EE---------------------------------------------------------
T ss_pred CEEEEECCCCCEEEEECCCC-EE---------------------------------------------------------
Confidence 99999999999999998321 00
Q ss_pred hhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcc
Q psy10063 666 EQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTP 745 (894)
Q Consensus 666 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~ 745 (894)
T Consensus 198 -------------------------------------------------------------------------------- 197 (383)
T 3ei3_B 198 -------------------------------------------------------------------------------- 197 (383)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCcceecCCCCceEEEeeCCCCC-EEEEecCCCcEEEEEccC----Cceee--ccccCCCceEeec-CCCeEEEE
Q psy10063 746 FKLDGSDTPILAGPVDIGFKMPEPPKRE-KLALALADKVSERYRDRK----NKATA--GFLLSCPDFLFDF-DTTREVTT 817 (894)
Q Consensus 746 ~~~dg~~~~~~~~h~~~v~~la~spdg~-~Latgs~Dg~I~iwd~~~----~~~~~--~~~~~~~~~~fS~-dg~~l~~a 817 (894)
..+.+|...|.+++|+|+++ +|++++.|+.|++||++. ...+. .+...+..++|++ ++.+++++
T Consensus 198 --------~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~ 269 (383)
T 3ei3_B 198 --------FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTT 269 (383)
T ss_dssp --------EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEE
T ss_pred --------EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEE
Confidence 01234677899999999999 999999999999999987 44433 3344566788999 99999999
Q ss_pred ecCCCCceeEEEeecCCcceeeeccCCC-----------------CCeeEEEEeeCCcEEEEecCCCcEEEEecCccccc
Q psy10063 818 TSTKVGKFDARFYHLIFEEEFARIKGHF-----------------GPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFD 880 (894)
Q Consensus 818 s~d~~g~~~I~vwd~~tg~~l~~l~gH~-----------------~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~ 880 (894)
+.++ .|+|||+..++++..+.+|. +.+..++|+|||++ +++.||.|+|||+..++++
T Consensus 270 ~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~ 343 (383)
T 3ei3_B 270 DQRN----EIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLV 343 (383)
T ss_dssp ESSS----EEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEE
T ss_pred cCCC----cEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCcee
Confidence 9887 69999999998877776553 23444677777776 8889999999999998887
Q ss_pred ccccc
Q psy10063 881 YTFDI 885 (894)
Q Consensus 881 ~~~~~ 885 (894)
..+..
T Consensus 344 ~~l~~ 348 (383)
T 3ei3_B 344 HQLRD 348 (383)
T ss_dssp EEECB
T ss_pred eeecC
Confidence 77653
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-28 Score=300.82 Aligned_cols=258 Identities=14% Similarity=0.209 Sum_probs=209.1
Q ss_pred EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecC--CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063 402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLR--MGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI 479 (894)
Q Consensus 402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~--tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V 479 (894)
...+.+|.+.|.+++|+|+|++|++|+.||.|+|||+. .++.+..+.+|.+ .|
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~-------------------------~V 56 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEG-------------------------PV 56 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSS-------------------------CE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcC-------------------------ce
Confidence 34678999999999999999999999999999999998 5577888999987 78
Q ss_pred EEEEEecC--CCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCeeEEEEcCC--CCEEEEEECCCCeEEEeccCccce
Q psy10063 480 NDMQFSKD--ATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVNSAALSPI--LPHVVLGGGQEAREVTTTSTKVGK 552 (894)
Q Consensus 480 ~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~~l~~spd--g~~l~~~~~~~~~~v~~~~~~~~~ 552 (894)
.+|+|+++ +.+|++|+.||.|+|||+..++ .+..+. |...|.+++|+|+ +.+|++++.++.
T Consensus 57 ~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~------------ 124 (753)
T 3jro_A 57 WRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK------------ 124 (753)
T ss_dssp EEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE------------
T ss_pred EEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCc------------
Confidence 88888876 8999999999999999999987 455555 5689999999999 999999999997
Q ss_pred eeEEEEecccc--ceEEEccCCCCCeEEEEEec-------------CCCEEEEEeCCCcEEEEECCCCccccCCCceeee
Q psy10063 553 FDARFYHLIFE--EEFARIKGHFGPINSLAFHP-------------DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSS 617 (894)
Q Consensus 553 ~~v~vwd~~~~--~~~~~l~~h~~~V~~l~~sp-------------dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~ 617 (894)
|++||+..+ .....+.+|...|.+++|+| ++.+|++|+.||.|++||++.+....
T Consensus 125 --I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~-------- 194 (753)
T 3jro_A 125 --VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY-------- 194 (753)
T ss_dssp --EEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEE--------
T ss_pred --EEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccc--------
Confidence 888888776 34456678999999999999 58999999999999999985432100
Q ss_pred EECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEe
Q psy10063 618 TQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVEL 697 (894)
Q Consensus 618 ~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 697 (894)
T Consensus 195 -------------------------------------------------------------------------------- 194 (753)
T 3jro_A 195 -------------------------------------------------------------------------------- 194 (753)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC---CCE
Q psy10063 698 TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK---REK 774 (894)
Q Consensus 698 s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd---g~~ 774 (894)
.....+.+|...|.+++|+|+ +.+
T Consensus 195 -----------------------------------------------------~~~~~~~~h~~~V~~l~~sp~~~~~~~ 221 (753)
T 3jro_A 195 -----------------------------------------------------VLESTLEGHSDWVRDVAWSPTVLLRSY 221 (753)
T ss_dssp -----------------------------------------------------EEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred -----------------------------------------------------eeeeeecCCCCcEEEEEeccCCCCCCE
Confidence 000123457888999999999 899
Q ss_pred EEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEe
Q psy10063 775 LALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH 854 (894)
Q Consensus 775 Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fS 854 (894)
|++++.||.|++||+..++... ...+....+|.+.|.+++|+
T Consensus 222 l~s~s~Dg~I~iwd~~~~~~~~--------------------------------------~~~~~~~~~~~~~v~~l~~s 263 (753)
T 3jro_A 222 LASVSQDRTCIIWTQDNEQGPW--------------------------------------KKTLLKEEKFPDVLWRASWS 263 (753)
T ss_dssp EEEEESSSCEEEEEESSSSSCC--------------------------------------BCCBSSSSCCSSCCCCEEEC
T ss_pred EEEEecCCEEEEecCCCCCCcc--------------------------------------eeEEeccCCCCCceEEEEEc
Confidence 9999999999999876533100 11223345788999999999
Q ss_pred eCCcEEEEecCCCcEEEEecCcc
Q psy10063 855 PDGKSYASGGEDGFVRLHTFDQA 877 (894)
Q Consensus 855 pdg~~LaS~s~Dg~V~vWdl~~~ 877 (894)
|+|++|++++.||.|+||++..+
T Consensus 264 pdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 264 LSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp TTTCCEEEECSSSCEECCBCCSS
T ss_pred CCCCEEEEEcCCCEEEEEecCCC
Confidence 99999999999999999999853
No 100
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=7.4e-28 Score=271.66 Aligned_cols=321 Identities=13% Similarity=0.029 Sum_probs=209.1
Q ss_pred CEEEEEEc---cCCCEEEEecCCCcEEEEecCCC-------e---EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063 411 KITSLLWG---NLDQYIITGHAKGDICTWDLRMG-------R---ELESISGHAKEPINDMQFSKDATMFITASHSQAVE 477 (894)
Q Consensus 411 ~V~~l~~s---pdg~~L~sgs~Dg~I~iWd~~tg-------~---~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~ 477 (894)
...++.|. +++..|+.++.|+.|++|++... . .+..+. +.. .+..+.|++......... + .
T Consensus 17 ~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~-~---~ 90 (393)
T 4gq1_A 17 RPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQ-TGL-PTLHLSFSSSCSYSENLH-D---G 90 (393)
T ss_dssp CEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEE-CSS-CEEEEEECTTCEEECC--------
T ss_pred CCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEe-cCC-CeeeEeecCCcccccccc-C---C
Confidence 34555663 44444555556788999986321 1 122222 333 788888877543322111 1 1
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE--E---e-CCCCeeEEEEcC--------CCCEEEEEECCCCeEE
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT--Y---T-TERPVNSAALSP--------ILPHVVLGGGQEAREV 543 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~--~---~-~~~~v~~l~~sp--------dg~~l~~~~~~~~~~v 543 (894)
.+....+++++.+|++++.|+.|+|||++.+++... + . |.+.|.+|+|+| ||++|++++.|+.
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t--- 167 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT--- 167 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE---
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe---
Confidence 344455667888999999999999999998876543 2 2 468999999998 8999999999997
Q ss_pred EeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcC
Q psy10063 544 TTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPD 622 (894)
Q Consensus 544 ~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spd 622 (894)
|+|||+..+.++..+.+|...|.+++|+|++. +|++|+.||.|++||++.++.......
T Consensus 168 -----------v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~--------- 227 (393)
T 4gq1_A 168 -----------LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQ--------- 227 (393)
T ss_dssp -----------EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------------
T ss_pred -----------EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccc---------
Confidence 99999998888888889999999999999875 799999999999999987653211000
Q ss_pred CcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcc
Q psy10063 623 GLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQ 702 (894)
Q Consensus 623 g~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~ 702 (894)
.... . ....+.+ ....
T Consensus 228 ----------------~~~~----------~--~~~~~s~-----------------------------------~~~~- 243 (393)
T 4gq1_A 228 ----------------TELV----------K--NPWLLTL-----------------------------------NTLP- 243 (393)
T ss_dssp -------------------C----------S--CCCSEEE-----------------------------------ESGG-
T ss_pred ----------------cCCc----------c--cceEEec-----------------------------------cccc-
Confidence 0000 0 0000000 0000
Q ss_pred eeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeC-CCCCEEEEecCC
Q psy10063 703 IEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEP-PKREKLALALAD 781 (894)
Q Consensus 703 ~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~s-pdg~~Latgs~D 781 (894)
........+|...+.+++|+ +|+++|++++.|
T Consensus 244 -----------------------------------------------~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d 276 (393)
T 4gq1_A 244 -----------------------------------------------LVNTCHSSGIASSLANVRWIGSDGSGILAMCKS 276 (393)
T ss_dssp -----------------------------------------------GC------CCSSSCSEEEEETTTTCEEEEECTT
T ss_pred -----------------------------------------------ceeeeecccccccceeeeeecCCCCEEEEEeCC
Confidence 00001234577778888876 899999999999
Q ss_pred CcEEEEEccCCceeecccc---------------------CCCceEeecC--CCeEEEEecCCCCceeEEEeecCCccee
Q psy10063 782 KVSERYRDRKNKATAGFLL---------------------SCPDFLFDFD--TTREVTTTSTKVGKFDARFYHLIFEEEF 838 (894)
Q Consensus 782 g~I~iwd~~~~~~~~~~~~---------------------~~~~~~fS~d--g~~l~~as~d~~g~~~I~vwd~~tg~~l 838 (894)
+.|++||+...+....+.. .....+|++. +.++++++.|+ .|+|||+..++++
T Consensus 277 ~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg----~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 277 GAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG----LIQLINTYEKDSN 352 (393)
T ss_dssp SEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT----EEEEEETTCTTCC
T ss_pred CCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCC----EEEEEECCCCcEE
Confidence 9999999876554322210 0112234442 23344445555 6999999999999
Q ss_pred eeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063 839 ARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ 876 (894)
Q Consensus 839 ~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~ 876 (894)
..+.+|..+|.+|+|+|||++||++++|| |.||++.+
T Consensus 353 ~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 353 SIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred EEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 99999999999999999999999999777 66777643
No 101
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=2.3e-27 Score=271.21 Aligned_cols=211 Identities=12% Similarity=0.137 Sum_probs=155.3
Q ss_pred CCccceeeeeccCccEEEecCCC-e---------------------EEEEEecCC------------CCEEEEEEccCC-
Q psy10063 377 PLSVDRLNSMSPAARKLATNAEP-V---------------------VKMQVTDQS------------AKITSLLWGNLD- 421 (894)
Q Consensus 377 ~~~~~~~~~~s~dg~~l~~~~~~-~---------------------~~~~l~~H~------------~~V~~l~~spdg- 421 (894)
..+....++|+++|++|+.+..+ . +...+.+|. +.|.+|+|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 34555677899999999876542 1 234667898 889999999998
Q ss_pred -CEEEEecCCCcEEEEecCCCeEEEEec---CCCC-----CCeeEE---EEcCCCCEEEEE-----eCCCCccceEEEEE
Q psy10063 422 -QYIITGHAKGDICTWDLRMGRELESIS---GHAK-----EPINDM---QFSKDATMFITA-----SHSQAVEPINDMQF 484 (894)
Q Consensus 422 -~~L~sgs~Dg~I~iWd~~tg~~~~~l~---~h~~-----~~V~~v---~~spdg~~la~~-----~~d~~i~~V~~l~~ 484 (894)
.+|++++.|+.|+|||+..++...... .+.+ ..+..+ .+.+.+ +++.. -..++...|.+++|
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMD-LMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEE-EEEEEEEEEEECSCCSSCCCEEEE
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchh-eeeeccceEEeccCCCcceEEEEE
Confidence 799999999999999998765432211 1000 000000 011111 11111 02233458999999
Q ss_pred ecCCCEEEEEECCCCEEEEEcC-CCcEEEEE--------eCCCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCccceee
Q psy10063 485 SKDATMFITASKDHTAKLFTTH-DRQLLKTY--------TTERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTKVGKFD 554 (894)
Q Consensus 485 spdg~~L~sgs~Dg~V~iwdl~-~~~~~~~~--------~~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~~~~~~ 554 (894)
+|++++|++| .|+.|+|||++ .++++..+ .|...|.+++|+|++ .+|++++.++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~-------------- 250 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT-------------- 250 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC--------------
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe--------------
Confidence 9999999998 89999999999 45555544 356789999999999 99999999997
Q ss_pred EEEEeccccce----EEEccCCCC------------CeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063 555 ARFYHLIFEEE----FARIKGHFG------------PINSLAFHPDGKSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 555 v~vwd~~~~~~----~~~l~~h~~------------~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~ 604 (894)
|++||++.++. +..+.+|.. .|.+++|+|+|++|++++. +.|+|||++.
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 88999988876 677888876 8999999999999999999 9999999975
No 102
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=2.5e-27 Score=256.51 Aligned_cols=187 Identities=18% Similarity=0.267 Sum_probs=154.1
Q ss_pred ccceeeeeccCccEEEecCCC-eE------------EEEEecCCCCEEEEEEcc--CCCEEEEecCCCcEEEEecCCCe-
Q psy10063 379 SVDRLNSMSPAARKLATNAEP-VV------------KMQVTDQSAKITSLLWGN--LDQYIITGHAKGDICTWDLRMGR- 442 (894)
Q Consensus 379 ~~~~~~~~s~dg~~l~~~~~~-~~------------~~~l~~H~~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg~- 442 (894)
...+.++|++||++|+.++.+ .+ ...|.+|.+.|.+|+|++ ++++|++|+.|+.|+|||+..++
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW 89 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce
Confidence 344567888999988876543 22 235678999999999986 48999999999999999999874
Q ss_pred -EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC--CCEEEEEECCCCEEEEEcCCCcE--EEEE-eC
Q psy10063 443 -ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD--ATMFITASKDHTAKLFTTHDRQL--LKTY-TT 516 (894)
Q Consensus 443 -~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~~--~~~~-~~ 516 (894)
.+..+.+|.. .|.+++|+|+ |.+|++++.|+.|+|||++.+.. ...+ .|
T Consensus 90 ~~~~~~~~h~~-------------------------~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h 144 (297)
T 2pm7_B 90 SQIAVHAVHSA-------------------------SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH 144 (297)
T ss_dssp CCCEEECCCSS-------------------------CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC
T ss_pred EEEEEeecCCC-------------------------ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecc
Confidence 5667777877 6788888886 88999999999999999987632 2333 35
Q ss_pred CCCeeEEEEcCC-------------CCEEEEEECCCCeEEEeccCccceeeEEEEeccccc----eEEEccCCCCCeEEE
Q psy10063 517 ERPVNSAALSPI-------------LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE----EFARIKGHFGPINSL 579 (894)
Q Consensus 517 ~~~v~~l~~spd-------------g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~----~~~~l~~h~~~V~~l 579 (894)
...|.+++|+|+ +++|++++.|+. |++||+..++ .+..+.+|...|.+|
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~--------------v~lwd~~~~~~~~~~~~~l~~H~~~V~~v 210 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL--------------VKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEETTSC--------------EEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcCCCc--------------EEEEEEcCCCceEEEEEEecCCCCceEEE
Confidence 688999999997 579999999997 8888887765 566788999999999
Q ss_pred EEecCC---CEEEEEeCCCcEEEEECCC
Q psy10063 580 AFHPDG---KSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 580 ~~spdg---~~l~sgs~Dg~I~vwdl~~ 604 (894)
+|+|++ .+|++++.|+.|+|||++.
T Consensus 211 ~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 999985 7999999999999999854
No 103
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=4.3e-26 Score=256.09 Aligned_cols=303 Identities=10% Similarity=0.040 Sum_probs=229.3
Q ss_pred eeccCccEEEecCC-CeEEEEEecCCCCEEEEEEccCCCEE-EEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcC
Q psy10063 385 SMSPAARKLATNAE-PVVKMQVTDQSAKITSLLWGNLDQYI-ITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSK 462 (894)
Q Consensus 385 ~~s~dg~~l~~~~~-~~~~~~l~~H~~~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~sp 462 (894)
.-+.|+.+.+.... ..+...+.+| ..+.+++|+|+|++| ++++.|+.|+|||+.++++++.+..+.
T Consensus 7 s~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~----------- 74 (391)
T 1l0q_A 7 ANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS----------- 74 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-----------
T ss_pred EcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-----------
Confidence 33455555544433 3444455555 459999999999977 677789999999999999998887665
Q ss_pred CCCEEEEEeCCCCccceEEEEEecCCCEEEEE-ECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC-CCC
Q psy10063 463 DATMFITASHSQAVEPINDMQFSKDATMFITA-SKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG-QEA 540 (894)
Q Consensus 463 dg~~la~~~~d~~i~~V~~l~~spdg~~L~sg-s~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~-~~~ 540 (894)
.+.+++|+|++++|+.+ +.++.|++||+.+++++..+.++..+.+++|+|+|++|++.+. ++.
T Consensus 75 ---------------~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 139 (391)
T 1l0q_A 75 ---------------SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKT 139 (391)
T ss_dssp ---------------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred ---------------CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCE
Confidence 47788888888877554 4679999999999999999998889999999999998865554 553
Q ss_pred eEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEE-EEEeCCCcEEEEECCCCccccCCCceeeeEE
Q psy10063 541 REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY-ASGGEDGFLISNTLSNGLDISEGSFTSSSTQ 619 (894)
Q Consensus 541 ~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l-~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~ 619 (894)
|++||+..++.+..+..| ..+.+++|+|++++| ++++.|+.|++||++.++.+.
T Consensus 140 --------------v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~---------- 194 (391)
T 1l0q_A 140 --------------VSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID---------- 194 (391)
T ss_dssp --------------EEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE----------
T ss_pred --------------EEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE----------
Confidence 899999999988888766 457999999999987 577788999999986542100
Q ss_pred CcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEecc
Q psy10063 620 QPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTK 699 (894)
Q Consensus 620 spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~ 699 (894)
T Consensus 195 -------------------------------------------------------------------------------- 194 (391)
T 1l0q_A 195 -------------------------------------------------------------------------------- 194 (391)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEec
Q psy10063 700 DEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALAL 779 (894)
Q Consensus 700 ~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs 779 (894)
.+ .+...+.+++|+|++++|++++
T Consensus 195 -------------------------------------------------------~~-~~~~~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 195 -------------------------------------------------------TV-KVEAAPSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp -------------------------------------------------------EE-ECSSEEEEEEECTTSSEEEEEE
T ss_pred -------------------------------------------------------EE-ecCCCccceEECCCCCEEEEEe
Confidence 00 0122456789999999999887
Q ss_pred ---CCCcEEEEEccCCceeeccccC--CCceEeecCCCeEEEEe-cCCCCceeEEEeecCCcceeeeccCCCCCee---E
Q psy10063 780 ---ADKVSERYRDRKNKATAGFLLS--CPDFLFDFDTTREVTTT-STKVGKFDARFYHLIFEEEFARIKGHFGPIN---S 850 (894)
Q Consensus 780 ---~Dg~I~iwd~~~~~~~~~~~~~--~~~~~fS~dg~~l~~as-~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~---~ 850 (894)
.++.|++||+..++.+..+..+ ...++|+++|++++++. .++ .|++||+.+++++..+..|..+.. .
T Consensus 219 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~----~v~v~d~~~~~~~~~~~~~~~~~~~~~~ 294 (391)
T 1l0q_A 219 VDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXN----TVSVIDTATNTITATMAVGKNPYASGQF 294 (391)
T ss_dssp ECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTT----EEEEEETTTTEEEEEEECSSSEECCSSC
T ss_pred cCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCC----EEEEEECCCCcEEEEEECCcCCCcccee
Confidence 6899999999988776554433 34578999999986554 444 699999999999988887765432 1
Q ss_pred EE------------EeeCC----------cEEEEecCCCcEEEEecCcccc
Q psy10063 851 LA------------FHPDG----------KSYASGGEDGFVRLHTFDQAYF 879 (894)
Q Consensus 851 l~------------fSpdg----------~~LaS~s~Dg~V~vWdl~~~~~ 879 (894)
+. |+.+. ..|...+.|..+++|++..+..
T Consensus 295 ~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~ 345 (391)
T 1l0q_A 295 IGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSS 345 (391)
T ss_dssp EEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCE
T ss_pred eecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCcc
Confidence 22 33222 3466777899999999987764
No 104
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=5.8e-27 Score=266.68 Aligned_cols=262 Identities=13% Similarity=0.208 Sum_probs=198.1
Q ss_pred EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063 404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ 483 (894)
Q Consensus 404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~ 483 (894)
.+.+|...|.+|+|+|||++||+|+.||.|+|||+.++++++.+.+|.. .|.+++
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~-------------------------~v~~~s 196 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA-------------------------RVGSLS 196 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-------------------------CEEEEE
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCC-------------------------ceEEEe
Confidence 4457889999999999999999999999999999999999999999987 566666
Q ss_pred EecCCCEEEEEECCCCEEEEEcCCC-cEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063 484 FSKDATMFITASKDHTAKLFTTHDR-QLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI 561 (894)
Q Consensus 484 ~spdg~~L~sgs~Dg~V~iwdl~~~-~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~ 561 (894)
| ++.+|++|+.|+.+++||.... ..+..+. |...+.++.|+++|++|++++.++. +++|++.
T Consensus 197 ~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~--------------v~i~~~~ 260 (420)
T 4gga_A 197 W--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNL--------------VNVWPSA 260 (420)
T ss_dssp E--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC--------------EEEEESS
T ss_pred e--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeecccc--------------ceEEeec
Confidence 6 4679999999999999999864 4445555 4688999999999999999999997 7788877
Q ss_pred ccc----eEEEccCCCCCeEEEEEecCCC-EEEE--EeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063 562 FEE----EFARIKGHFGPINSLAFHPDGK-SYAS--GGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH 634 (894)
Q Consensus 562 ~~~----~~~~l~~h~~~V~~l~~spdg~-~l~s--gs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~ 634 (894)
.++ .+..+..|...|.+++|+|++. +|++ |+.|+.|+|||+..++.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~------------------------- 315 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS------------------------- 315 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE-------------------------
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce-------------------------
Confidence 654 3456678999999999999765 5554 3579999999987653110
Q ss_pred EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063 635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH 714 (894)
Q Consensus 635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ 714 (894)
.
T Consensus 316 ~------------------------------------------------------------------------------- 316 (420)
T 4gga_A 316 A------------------------------------------------------------------------------- 316 (420)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred e-------------------------------------------------------------------------------
Confidence 0
Q ss_pred CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEec--CCCcEEEEEccCC
Q psy10063 715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALAL--ADKVSERYRDRKN 792 (894)
Q Consensus 715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs--~Dg~I~iwd~~~~ 792 (894)
+. +...+.++.|++++..|++++ .|+.|+|||+.++
T Consensus 317 -----------------------------------------~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~ 354 (420)
T 4gga_A 317 -----------------------------------------VD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 354 (420)
T ss_dssp -----------------------------------------EE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred -----------------------------------------ec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC
Confidence 00 122466778889988888754 7999999999998
Q ss_pred ceeecc---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeC
Q psy10063 793 KATAGF---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD 856 (894)
Q Consensus 793 ~~~~~~---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpd 856 (894)
+++..+ ...+..++|+|||++|++++.|+ .|+|||+......+..+.|...+....|..+
T Consensus 355 ~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~----tvriWdv~~~~~~~~~~~~~~~~~~~s~~~~ 417 (420)
T 4gga_A 355 AKVAELKGHTSRVLSLTMSPDGATVASAAADE----TLRLWRCFELDPARRREREKASAAKSSLIHQ 417 (420)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTT----EEEEECCSCSSCC------------------
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCC----eEEEEECCCCCccchhhhccCCccccccCCC
Confidence 886554 34556788999999999999998 6999999888777777777666655555443
No 105
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.2e-28 Score=267.40 Aligned_cols=266 Identities=10% Similarity=0.003 Sum_probs=206.1
Q ss_pred EEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE
Q psy10063 416 LWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS 495 (894)
Q Consensus 416 ~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs 495 (894)
.+..++.+|++|+.||.|+|||+.+++.+..+. .. .|.+++|+|+ |++++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~-------------------------~v~~~~~~~~---~~s~s 92 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TP-------------------------NPRTGGEHPA---IISRG 92 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EE-------------------------CCCTTCCCCS---EEEEC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cC-------------------------CceeeeeCCc---eEEec
Confidence 445688899999999999999999998887776 22 4555666665 77777
Q ss_pred CCCCEEEEEc---------CCCcEEEEEeC--CCCeeEEEEcC--CCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063 496 KDHTAKLFTT---------HDRQLLKTYTT--ERPVNSAALSP--ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF 562 (894)
Q Consensus 496 ~Dg~V~iwdl---------~~~~~~~~~~~--~~~v~~l~~sp--dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~ 562 (894)
.|+.|++|+. ..+++++.+.. .+.|.+++|+| ++++|++++.++. |++||++.
T Consensus 93 ~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~--------------i~~wd~~~ 158 (343)
T 3lrv_A 93 PCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGT--------------IGFQSYED 158 (343)
T ss_dssp STTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCC--------------EEEEESSS
T ss_pred CCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCc--------------EEEEECCC
Confidence 7777777754 46666666653 46799999999 9999999999997 89999999
Q ss_pred cceEEEcc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccC
Q psy10063 563 EEEFARIK-GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHST 641 (894)
Q Consensus 563 ~~~~~~l~-~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~ 641 (894)
++.+..+. .|...|.+++|+|+|.+|++|+.||.|+|||++.++.+.
T Consensus 159 ~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~-------------------------------- 206 (343)
T 3lrv_A 159 DSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS-------------------------------- 206 (343)
T ss_dssp SCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC--------------------------------
T ss_pred CcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc--------------------------------
Confidence 98877664 455689999999999999999999999999987543110
Q ss_pred CCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEe
Q psy10063 642 SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHV 721 (894)
Q Consensus 642 ~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v 721 (894)
T Consensus 207 -------------------------------------------------------------------------------- 206 (343)
T 3lrv_A 207 -------------------------------------------------------------------------------- 206 (343)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCccccccCCcceeeccccCcccccCCCCcceec-CCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc-
Q psy10063 722 NPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILA-GPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL- 799 (894)
Q Consensus 722 ~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~-~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~- 799 (894)
..+. +|...|.+|+|+|++.+|++++ |+.|+|||++..+.+..+.
T Consensus 207 --------------------------------~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~ 253 (343)
T 3lrv_A 207 --------------------------------SRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPT 253 (343)
T ss_dssp --------------------------------EECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCC
T ss_pred --------------------------------cEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecc
Confidence 0112 2777899999999999999999 4599999999887654332
Q ss_pred -----cCCC--ceEeecCCCeEEEEec-CCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee---CCcEEEEecCCCc
Q psy10063 800 -----LSCP--DFLFDFDTTREVTTTS-TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP---DGKSYASGGEDGF 868 (894)
Q Consensus 800 -----~~~~--~~~fS~dg~~l~~as~-d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp---dg~~LaS~s~Dg~ 868 (894)
..+. .++|+++|++|+++++ ++ .|+||++..+...... .++..++|.+ +++.|++++.||.
T Consensus 254 ~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~----~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~ 325 (343)
T 3lrv_A 254 YTIPEFKTGTVTYDIDDSGKNMIAYSNESN----SLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGG 325 (343)
T ss_dssp CBC-----CCEEEEECTTSSEEEEEETTTT----EEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTE
T ss_pred cccccccccceEEEECCCCCEEEEecCCCC----cEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCc
Confidence 2233 4899999999999887 65 5999999766543332 5677889998 8899999999999
Q ss_pred EEEEecCccc
Q psy10063 869 VRLHTFDQAY 878 (894)
Q Consensus 869 V~vWdl~~~~ 878 (894)
+++|-.....
T Consensus 326 ~~~~~~~~~~ 335 (343)
T 3lrv_A 326 IAAILKTNDS 335 (343)
T ss_dssp EEEEEECSSE
T ss_pred eEEEEecCCe
Confidence 9998765543
No 106
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=3.1e-26 Score=262.62 Aligned_cols=297 Identities=13% Similarity=0.140 Sum_probs=229.0
Q ss_pred eeeccCccEEEecCC-----------CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCC
Q psy10063 384 NSMSPAARKLATNAE-----------PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAK 452 (894)
Q Consensus 384 ~~~s~dg~~l~~~~~-----------~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~ 452 (894)
.+++++|++|+.++. ......+.+|.+.|.+++|+ +++|++|+.||.|+|||+.+++.+..+.+|..
T Consensus 123 ~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~ 200 (445)
T 2ovr_B 123 TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTS 200 (445)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred EEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCC
Confidence 356667777765543 23444778999999999997 67999999999999999999999999999987
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCE
Q psy10063 453 EPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPH 531 (894)
Q Consensus 453 ~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~ 531 (894)
.|.+++|+ +.+|++|+.||.|++||++.++++..+.. ...|.+++| ++.+
T Consensus 201 -------------------------~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~ 251 (445)
T 2ovr_B 201 -------------------------TVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRR 251 (445)
T ss_dssp -------------------------CEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSC
T ss_pred -------------------------cEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCE
Confidence 67777774 56899999999999999999999988875 588999999 7899
Q ss_pred EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCC
Q psy10063 532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEG 611 (894)
Q Consensus 532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~ 611 (894)
|++++.++. |++||++.++.+..+.+|...|.+++| ++.+|++++.||.|++||++.++.+..
T Consensus 252 l~~~~~dg~--------------i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~- 314 (445)
T 2ovr_B 252 VVSGAYDFM--------------VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT- 314 (445)
T ss_dssp EEEEETTSC--------------EEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEE-
T ss_pred EEEEcCCCE--------------EEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEE-
Confidence 999999997 899999999999999999999999999 889999999999999999987653311
Q ss_pred CceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCC
Q psy10063 612 SFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDE 691 (894)
Q Consensus 612 ~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 691 (894)
+..+.+.+..+.. ++..+++++ .++.|++|+..
T Consensus 315 --------------~~~~~~~v~~~~~------~~~~l~~~~--~dg~i~vwd~~------------------------- 347 (445)
T 2ovr_B 315 --------------LTGHQSLTSGMEL------KDNILVSGN--ADSTVKIWDIK------------------------- 347 (445)
T ss_dssp --------------ECCCCSCEEEEEE------ETTEEEEEE--TTSCEEEEETT-------------------------
T ss_pred --------------EcCCcccEEEEEE------eCCEEEEEe--CCCeEEEEECC-------------------------
Confidence 0011111111211 223444444 45566665522
Q ss_pred cceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCccee---cCCCCceEEEee
Q psy10063 692 QQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPIL---AGPVDIGFKMPE 768 (894)
Q Consensus 692 ~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~---~~h~~~v~~la~ 768 (894)
.+ +....+ ..|...|.+++|
T Consensus 348 --------------------------------------------------~~-------~~~~~~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 348 --------------------------------------------------TG-------QCLQTLQGPNKHQSAVTCLQF 370 (445)
T ss_dssp --------------------------------------------------TC-------CEEEEECSTTSCSSCEEEEEE
T ss_pred --------------------------------------------------CC-------cEEEEEccCCCCCCCEEEEEE
Confidence 11 001111 237778999999
Q ss_pred CCCCCEEEEecCCCcEEEEEccCCceeeccc--------cCCCceEeecCCCeEEEEecCCCCceeEEEeecCC
Q psy10063 769 PPKREKLALALADKVSERYRDRKNKATAGFL--------LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF 834 (894)
Q Consensus 769 spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~--------~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t 834 (894)
+ +.+|++|+.||.|++||+..++.+..+. ..+..++|++++..+++++.++.....|+|||+..
T Consensus 371 ~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 371 N--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp C--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred C--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 5 6899999999999999999988766552 23446789999999999999986555699999874
No 107
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.3e-27 Score=254.79 Aligned_cols=251 Identities=18% Similarity=0.184 Sum_probs=207.4
Q ss_pred CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCC
Q psy10063 441 GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERP 519 (894)
Q Consensus 441 g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~ 519 (894)
.+.++.+.+|.+ .|.+|+| +++++|++++.||.|+|||+..+++...+. +...
T Consensus 8 ~~~~~~l~~h~~-------------------------~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~ 61 (313)
T 3odt_A 8 YQLSATLKGHDQ-------------------------DVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGF 61 (313)
T ss_dssp CEEEEEECCCSS-------------------------CEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSC
T ss_pred HHHHHHhhCCCC-------------------------CcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCcc
Confidence 367788889987 7888999 889999999999999999999998887776 4689
Q ss_pred eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc---cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy10063 520 VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF---EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGF 596 (894)
Q Consensus 520 v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~---~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~ 596 (894)
|.+++|+|++++|++++.++. |++|++.. ++.+..+.+|...|.+++| ++++|++++.||.
T Consensus 62 v~~~~~~~~~~~l~~~~~dg~--------------i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~ 125 (313)
T 3odt_A 62 LNSVCYDSEKELLLFGGKDTM--------------INGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKT 125 (313)
T ss_dssp EEEEEEETTTTEEEEEETTSC--------------EEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred EEEEEECCCCCEEEEecCCCe--------------EEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCC
Confidence 999999999999999999998 66666544 3567778899999999999 5789999999999
Q ss_pred EEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhccc
Q psy10063 597 LISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMS 676 (894)
Q Consensus 597 I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~ 676 (894)
|++||. ++.+
T Consensus 126 i~~~d~--~~~~-------------------------------------------------------------------- 135 (313)
T 3odt_A 126 AKVWKE--GSLV-------------------------------------------------------------------- 135 (313)
T ss_dssp EEEEET--TEEE--------------------------------------------------------------------
T ss_pred EEEEcC--CcEE--------------------------------------------------------------------
Confidence 999982 1100
Q ss_pred ccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCccee
Q psy10063 677 INHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPIL 756 (894)
Q Consensus 677 ~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~ 756 (894)
..+
T Consensus 136 -----------------------------------------------------------------------------~~~ 138 (313)
T 3odt_A 136 -----------------------------------------------------------------------------YNL 138 (313)
T ss_dssp -----------------------------------------------------------------------------EEE
T ss_pred -----------------------------------------------------------------------------Eec
Confidence 012
Q ss_pred cCCCCceEEEeeCC-CCCEEEEecCCCcEEEEEccCCceeec--cccCCCceEeecCCCeEEEEecCCCCceeEEEeecC
Q psy10063 757 AGPVDIGFKMPEPP-KREKLALALADKVSERYRDRKNKATAG--FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLI 833 (894)
Q Consensus 757 ~~h~~~v~~la~sp-dg~~Latgs~Dg~I~iwd~~~~~~~~~--~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~ 833 (894)
..|...+.++++++ ++.+|++++.|+.|++||......... +...+..++|++++. +++++.++ .|++||+.
T Consensus 139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg----~i~i~d~~ 213 (313)
T 3odt_A 139 QAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDG----LIKLVDMH 213 (313)
T ss_dssp ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTS----EEEEEETT
T ss_pred ccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCC----eEEEEECC
Confidence 23556678888877 899999999999999999544333222 334456788999999 78887776 69999999
Q ss_pred CcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccC
Q psy10063 834 FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDIS 886 (894)
Q Consensus 834 tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~ 886 (894)
.++++..+.+|...|.+|+|+|++ +|++++.||.|+||++..++....+...
T Consensus 214 ~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 214 TGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLP 265 (313)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECS
T ss_pred chhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEecc
Confidence 999999999999999999999999 5999999999999999999887776544
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=2.5e-27 Score=260.55 Aligned_cols=249 Identities=14% Similarity=0.110 Sum_probs=203.2
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCc----EEEEEeCCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccce
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQ----LLKTYTTERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGK 552 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~----~~~~~~~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~ 552 (894)
.|.+++|+|++++|++++.||.|+|||+..++ +.....+...|.+++|+|+++ +|++++.++.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~------------ 80 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE------------ 80 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC------------
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCe------------
Confidence 79999999999999999999999999999887 666666789999999999999 9999999987
Q ss_pred eeEEEEec-cccceEEEccC--CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEec
Q psy10063 553 FDARFYHL-IFEEEFARIKG--HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ 629 (894)
Q Consensus 553 ~~v~vwd~-~~~~~~~~l~~--h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~ 629 (894)
|++||+ ..++. ..+.+ |...|.+++|++ +.+|++++.||.|++||++.....
T Consensus 81 --i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~--------------------- 135 (342)
T 1yfq_A 81 --ILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDG--------------------- 135 (342)
T ss_dssp --EEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTB---------------------
T ss_pred --EEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccc---------------------
Confidence 888998 76654 67788 999999999999 999999999999999997431000
Q ss_pred CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeee
Q psy10063 630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNR 709 (894)
Q Consensus 630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 709 (894)
.. ..
T Consensus 136 --~~-~~------------------------------------------------------------------------- 139 (342)
T 1yfq_A 136 --VI-AV------------------------------------------------------------------------- 139 (342)
T ss_dssp --CE-EE-------------------------------------------------------------------------
T ss_pred --cc-cc-------------------------------------------------------------------------
Confidence 00 00
Q ss_pred EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEc
Q psy10063 710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRD 789 (894)
Q Consensus 710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~ 789 (894)
.++....+. |...|.+++|++++ |++++.|+.|++||+
T Consensus 140 ---------------------------------------~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~ 177 (342)
T 1yfq_A 140 ---------------------------------------KNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRL 177 (342)
T ss_dssp ---------------------------------------EESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEES
T ss_pred ---------------------------------------cCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEEC
Confidence 000000111 55678899999887 999999999999999
Q ss_pred cC-Ccee-----eccccCCCceEeec-CCCeEEEEecCCCCceeEEEeecCCc------ceeeeccCCCC---------C
Q psy10063 790 RK-NKAT-----AGFLLSCPDFLFDF-DTTREVTTTSTKVGKFDARFYHLIFE------EEFARIKGHFG---------P 847 (894)
Q Consensus 790 ~~-~~~~-----~~~~~~~~~~~fS~-dg~~l~~as~d~~g~~~I~vwd~~tg------~~l~~l~gH~~---------~ 847 (894)
+. .... ..+...+..++|++ +++++++++.++ .|+||+++.+ +.+..+.+|.. .
T Consensus 178 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (342)
T 1yfq_A 178 PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG----RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP 253 (342)
T ss_dssp SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS----EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCC
T ss_pred CccccccceeeecCCCCceeEEEECCCCCCEEEEEecCC----cEEEEEEcCCCcccccccceeeeccccccccccccee
Confidence 87 4431 12233456788999 999999999887 6999999887 77888888865 9
Q ss_pred eeEEEEeeCCcEEEEecCCCcEEEEecCcccccccccc
Q psy10063 848 INSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDI 885 (894)
Q Consensus 848 V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~ 885 (894)
|.+++|+|++++|++++.||.|+|||+..++++..+..
T Consensus 254 i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 291 (342)
T 1yfq_A 254 VNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291 (342)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred EEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhc
Confidence 99999999999999999999999999998888777653
No 109
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=1.7e-27 Score=272.40 Aligned_cols=188 Identities=14% Similarity=0.131 Sum_probs=146.8
Q ss_pred ceeeeecc-CccEEEecCC-CeEE------------EEEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063 381 DRLNSMSP-AARKLATNAE-PVVK------------MQVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGRELE 445 (894)
Q Consensus 381 ~~~~~~s~-dg~~l~~~~~-~~~~------------~~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~~~ 445 (894)
...++|+| ++.+|+.++. +.++ +.+.+|.+.|.+|+|+| ++.+|++|+.||.|+|||++.+....
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~ 201 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRV 201 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeE
Confidence 44567887 4566766543 2222 24568999999999998 68899999999999999998665443
Q ss_pred EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEE
Q psy10063 446 SISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAA 524 (894)
Q Consensus 446 ~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~ 524 (894)
....+.. . ..+.+++|++++.+|++|+.||.|+|||++.. .+..+. |...|.+++
T Consensus 202 ~~~~~~~-~----------------------~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 202 FASSDTI-N----------------------IWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVA 257 (435)
T ss_dssp EECCSSC-S----------------------CCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEE
T ss_pred EeccCCC-C----------------------ccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeee
Confidence 3333322 1 15788999999999999999999999999754 444444 568999999
Q ss_pred EcCCCC-EEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE---ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q psy10063 525 LSPILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR---IKGHFGPINSLAFHPDGKSYASGGEDGFLISN 600 (894)
Q Consensus 525 ~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~---l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vw 600 (894)
|+|++. +|++++.|+. |++||++.++.... ..+|...|.+|+|+|+|.+|++++.||.|+||
T Consensus 258 ~~p~~~~~~~s~s~d~~--------------v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iw 323 (435)
T 4e54_B 258 LNPCCDWFLATASVDQT--------------VKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVY 323 (435)
T ss_dssp ECTTCSSEEEEEETTSB--------------CCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEE
T ss_pred ecCCCceEEEEecCcce--------------eeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEE
Confidence 999987 5667888886 78888877654433 35799999999999999999999999999999
Q ss_pred ECCCCc
Q psy10063 601 TLSNGL 606 (894)
Q Consensus 601 dl~~~~ 606 (894)
|+..+.
T Consensus 324 d~~~~~ 329 (435)
T 4e54_B 324 SASQWD 329 (435)
T ss_dssp ESSSSS
T ss_pred ECCCCc
Confidence 997654
No 110
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=2.4e-26 Score=258.63 Aligned_cols=316 Identities=9% Similarity=0.077 Sum_probs=197.5
Q ss_pred CCccceeeeecc-CccEEEecCCC-eEEE-EE----------------------ecCCCCEEEEEEcc-CCCEEEEecCC
Q psy10063 377 PLSVDRLNSMSP-AARKLATNAEP-VVKM-QV----------------------TDQSAKITSLLWGN-LDQYIITGHAK 430 (894)
Q Consensus 377 ~~~~~~~~~~s~-dg~~l~~~~~~-~~~~-~l----------------------~~H~~~V~~l~~sp-dg~~L~sgs~D 430 (894)
+......++|+| +|++|+.+..+ .+++ .+ .+|.+.|.+++|+| ++++|++++.|
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 121 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD 121 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC
Confidence 445556678999 99999877543 3333 11 24999999999999 77899999999
Q ss_pred CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec---CCCEEEEEECCCCEEEEEcCC
Q psy10063 431 GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK---DATMFITASKDHTAKLFTTHD 507 (894)
Q Consensus 431 g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp---dg~~L~sgs~Dg~V~iwdl~~ 507 (894)
|.|+|||+..++.+..+. +.. .+.+++|++ ++.+|++++.||.|++||++.
T Consensus 122 ~~i~iwd~~~~~~~~~~~-~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFN-FEE-------------------------TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp SEEEEEETTTTEEEEEEE-CSS-------------------------CEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred CeEEEeeCCCCccceecc-CCC-------------------------ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 999999999999888887 333 355555555 556999999999999999999
Q ss_pred CcEEEEEe-CCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccceeeEEEEeccccc-eEEEc---------------
Q psy10063 508 RQLLKTYT-TERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE-EFARI--------------- 569 (894)
Q Consensus 508 ~~~~~~~~-~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~-~~~~l--------------- 569 (894)
++++..+. +...|.+++|+|+++ .|++++.++. |++||++.+. .+..+
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~--------------i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSR--------------VKLWDVRRASGCLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSC--------------EEEEETTCSSCCSEECCTTTTCSCCCTTTSS
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCc--------------EEEEECCCCCcccccccccccccceeecccc
Confidence 99988887 568899999999999 4888998887 6777776554 33333
Q ss_pred cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCee
Q psy10063 570 KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGV 649 (894)
Q Consensus 570 ~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i 649 (894)
.+|...|.+++|+|++++|++++.||.|++||+..++........... ... .+....+.. .....+
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~-----~~~~~~ 307 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCN-NSK--------KGLKFTVSC-----GCSSEF 307 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCC-CCS--------SCCCCEECC-----SSSSCE
T ss_pred ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccc-ccc--------ccceeEEec-----CCCceE
Confidence 578899999999999999999999999999999877643211000000 000 000000000 000011
Q ss_pred eeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCcccc
Q psy10063 650 FSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQS 729 (894)
Q Consensus 650 ~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~ 729 (894)
+.++ .++.
T Consensus 308 ~~~~--~~~~---------------------------------------------------------------------- 315 (408)
T 4a11_B 308 VFVP--YGST---------------------------------------------------------------------- 315 (408)
T ss_dssp EEEE--ETTE----------------------------------------------------------------------
T ss_pred EEEe--cCCE----------------------------------------------------------------------
Confidence 1111 1112
Q ss_pred ccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeec
Q psy10063 730 VDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDF 809 (894)
Q Consensus 730 ~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~ 809 (894)
+.+|+... +.....+.+|...|.+++|+|++.+|++++.||.|++|++...+.+...........+.+
T Consensus 316 -----i~v~d~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 383 (408)
T 4a11_B 316 -----IAVYTVYS-------GEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTKSQLNP 383 (408)
T ss_dssp -----EEEEETTT-------CCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------
T ss_pred -----EEEEECcC-------CcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEecccccc
Confidence 23333222 223345677899999999999999999999999999999999887766554444444555
Q ss_pred CCCeEEEEecCCCCceeEEEeecC
Q psy10063 810 DTTREVTTTSTKVGKFDARFYHLI 833 (894)
Q Consensus 810 dg~~l~~as~d~~g~~~I~vwd~~ 833 (894)
....+++..++.. .|++|+..
T Consensus 384 ~~~~~~~~~~~~~---~~~~W~~~ 404 (408)
T 4a11_B 384 AFEDAWSSSDEEG---GTSAWSHP 404 (408)
T ss_dssp ------------------------
T ss_pred ccceeecccCccC---ceeecCCc
Confidence 4444444333322 58999875
No 111
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=4.2e-27 Score=266.00 Aligned_cols=246 Identities=15% Similarity=0.123 Sum_probs=204.1
Q ss_pred EEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCC-------eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063 404 QVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMG-------RELESISGHAKEPINDMQFSKDATMFITASHSQA 475 (894)
Q Consensus 404 ~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg-------~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~ 475 (894)
.+.+|.+.|.+++|+| ++++|++|+.||.|+|||+..+ +.+..+.+|..
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~----------------------- 132 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK----------------------- 132 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS-----------------------
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC-----------------------
Confidence 4568999999999999 9999999999999999999988 56778888887
Q ss_pred ccceEEEEEecCC-CEEEEEECCCCEEEEEcCCCcEEEEE--e-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063 476 VEPINDMQFSKDA-TMFITASKDHTAKLFTTHDRQLLKTY--T-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG 551 (894)
Q Consensus 476 i~~V~~l~~spdg-~~L~sgs~Dg~V~iwdl~~~~~~~~~--~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~ 551 (894)
.|.+|+|+|++ .+|++++.||.|+|||++.++++..+ . |...|.+++|+|++++|++++.++.
T Consensus 133 --~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------- 199 (402)
T 2aq5_A 133 --RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKR----------- 199 (402)
T ss_dssp --CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSE-----------
T ss_pred --eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCc-----------
Confidence 78888888887 69999999999999999999999988 4 5688999999999999999999986
Q ss_pred eeeEEEEeccccceEEEc-cCCCCC-eEEEEEecCCCEEEEE---eCCCcEEEEECCCCccccCCCceeeeEECcCCcEE
Q psy10063 552 KFDARFYHLIFEEEFARI-KGHFGP-INSLAFHPDGKSYASG---GEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVY 626 (894)
Q Consensus 552 ~~~v~vwd~~~~~~~~~l-~~h~~~-V~~l~~spdg~~l~sg---s~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l 626 (894)
|++||++.++.+..+ .+|.+. +.+++|++++++|++| +.|+.|++||++..+...
T Consensus 200 ---i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~----------------- 259 (402)
T 2aq5_A 200 ---VRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL----------------- 259 (402)
T ss_dssp ---EEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS-----------------
T ss_pred ---EEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc-----------------
Confidence 899999999999988 788876 8999999999999999 789999999986532100
Q ss_pred EecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEE
Q psy10063 627 PSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMA 706 (894)
Q Consensus 627 ~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~ 706 (894)
.
T Consensus 260 ----------------------------------~--------------------------------------------- 260 (402)
T 2aq5_A 260 ----------------------------------S--------------------------------------------- 260 (402)
T ss_dssp ----------------------------------E---------------------------------------------
T ss_pred ----------------------------------e---------------------------------------------
Confidence 0
Q ss_pred eeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEE-EecCCCcEE
Q psy10063 707 RNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLA-LALADKVSE 785 (894)
Q Consensus 707 ~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~La-tgs~Dg~I~ 785 (894)
.....|...+.+++|+|++++|+ +++.|+.|+
T Consensus 261 -----------------------------------------------~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~ 293 (402)
T 2aq5_A 261 -----------------------------------------------LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIR 293 (402)
T ss_dssp -----------------------------------------------EEECCCCSSCEEEEEETTTTEEEEEETTCSCEE
T ss_pred -----------------------------------------------EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEE
Confidence 00012344578899999999997 566899999
Q ss_pred EEEccCCce----eeccc--cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcce
Q psy10063 786 RYRDRKNKA----TAGFL--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE 837 (894)
Q Consensus 786 iwd~~~~~~----~~~~~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~ 837 (894)
+|++..++. +..+. ..+..++|++++.++++ +++ .+++|++..+++
T Consensus 294 i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~----~~~~~~l~~~~~ 345 (402)
T 2aq5_A 294 YFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCE----IARFYKLHERKC 345 (402)
T ss_dssp EEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTE----EEEEEEEETTEE
T ss_pred EEEecCCCcceEeecccccCCcccceEEeccccccee--cce----eEEEEEcCCCcE
Confidence 999998772 33333 55678899999998764 333 599999987654
No 112
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-26 Score=257.57 Aligned_cols=190 Identities=17% Similarity=0.242 Sum_probs=157.9
Q ss_pred CCccceeeeeccCccEEEecCC-Ce------------EEEEEecCCCCEEEEEEccC--CCEEEEecCCCcEEEEecCCC
Q psy10063 377 PLSVDRLNSMSPAARKLATNAE-PV------------VKMQVTDQSAKITSLLWGNL--DQYIITGHAKGDICTWDLRMG 441 (894)
Q Consensus 377 ~~~~~~~~~~s~dg~~l~~~~~-~~------------~~~~l~~H~~~V~~l~~spd--g~~L~sgs~Dg~I~iWd~~tg 441 (894)
+......++|++||++|+.+.. .. ....+.+|.+.|.+|+|+++ +++|++|+.||.|+|||+..+
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 89 (379)
T 3jrp_A 10 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 89 (379)
T ss_dssp CCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT
T ss_pred CcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC
Confidence 3344556678888888877643 22 22356789999999999987 999999999999999999999
Q ss_pred e--EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC--CCEEEEEECCCCEEEEEcCCCcE--EEEE-
Q psy10063 442 R--ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD--ATMFITASKDHTAKLFTTHDRQL--LKTY- 514 (894)
Q Consensus 442 ~--~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~~--~~~~- 514 (894)
+ .+..+.+|.. .|.+++|+|+ +.+|++++.||.|+|||++.+.. ...+
T Consensus 90 ~~~~~~~~~~~~~-------------------------~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 144 (379)
T 3jrp_A 90 RWSQIAVHAVHSA-------------------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID 144 (379)
T ss_dssp EEEEEEEECCCSS-------------------------CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE
T ss_pred ceeEeeeecCCCc-------------------------ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec
Confidence 7 6777788877 7888888888 89999999999999999998743 2233
Q ss_pred eCCCCeeEEEEcC-------------CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc----eEEEccCCCCCeE
Q psy10063 515 TTERPVNSAALSP-------------ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE----EFARIKGHFGPIN 577 (894)
Q Consensus 515 ~~~~~v~~l~~sp-------------dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~----~~~~l~~h~~~V~ 577 (894)
.+...|.+++|+| ++.+|++++.++. |++||++.++ .+..+.+|...|.
T Consensus 145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~--------------i~i~d~~~~~~~~~~~~~~~~h~~~v~ 210 (379)
T 3jrp_A 145 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL--------------VKIWKYNSDAQTYVLESTLEGHSDWVR 210 (379)
T ss_dssp CCTTCEEEEEECCCC----------CTTCEEEEEETTSC--------------EEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCe--------------EEEEEecCCCcceeeEEEEecccCcEe
Confidence 4578999999999 6999999999997 7888877654 4567788999999
Q ss_pred EEEEecC---CCEEEEEeCCCcEEEEECCCC
Q psy10063 578 SLAFHPD---GKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 578 ~l~~spd---g~~l~sgs~Dg~I~vwdl~~~ 605 (894)
+++|+|+ +++|++++.||.|+|||++.+
T Consensus 211 ~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 9999999 899999999999999998654
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2e-27 Score=270.51 Aligned_cols=253 Identities=12% Similarity=0.061 Sum_probs=198.3
Q ss_pred CeeEEEEcCCCCEEEEEeCCCCc-------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCe
Q psy10063 454 PINDMQFSKDATMFITASHSQAV-------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPV 520 (894)
Q Consensus 454 ~V~~v~~spdg~~la~~~~d~~i-------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v 520 (894)
+|.+|+|+|||++||+++.|+.+ +.|.+++|+|+| .++.+++|+.+.. .+..+.+...|
T Consensus 17 ~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~-~~~~~~~~~~V 88 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQN-GLLNSQPVCYP 88 (588)
T ss_dssp SSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS-CSSTTSCSCCE
T ss_pred cEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCC-------CcceEEEEeCCCc-eEeecCCCCcE
Confidence 89999999999999999998776 578899999998 4666666654322 23333457889
Q ss_pred eEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC-----CeEEEEEecCCCEEEEEeCCC
Q psy10063 521 NSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG-----PINSLAFHPDGKSYASGGEDG 595 (894)
Q Consensus 521 ~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~-----~V~~l~~spdg~~l~sgs~Dg 595 (894)
.+++|||+|++|++++.++. |++||.+. ++..+. |.. .|.+++|+|||++|++|+.||
T Consensus 89 ~~vawSPdG~~LAs~s~dg~--------------V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG 151 (588)
T 2j04_A 89 RVCKPSPIDDWMAVLSNNGN--------------VSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG 151 (588)
T ss_dssp EEEEECSSSSCEEEEETTSC--------------EEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred EEEEECCCCCEEEEEeCCCc--------------EEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence 99999999999999999997 78888543 666666 665 599999999999999999999
Q ss_pred cEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcc
Q psy10063 596 FLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRM 675 (894)
Q Consensus 596 ~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~ 675 (894)
.|+||++..+..... .++ .+..+.
T Consensus 152 tVkIWd~~~~~l~~~-~~i-----------------~l~ti~-------------------------------------- 175 (588)
T 2j04_A 152 ELQFFSIRKNSENTP-EFY-----------------FESSIR-------------------------------------- 175 (588)
T ss_dssp EEEEEECCCCTTTCC-CCE-----------------EEEEEE--------------------------------------
T ss_pred EEEEEECCCCccccc-cce-----------------eeeeee--------------------------------------
Confidence 999999876421000 000 000000
Q ss_pred cccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcce
Q psy10063 676 SINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPI 755 (894)
Q Consensus 676 ~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~ 755 (894)
..
T Consensus 176 ------------------------------------------------------------------------------~~ 177 (588)
T 2j04_A 176 ------------------------------------------------------------------------------LS 177 (588)
T ss_dssp ------------------------------------------------------------------------------CS
T ss_pred ------------------------------------------------------------------------------cc
Confidence 01
Q ss_pred ecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce------ee-ccccCCCceEeecCCCeEEEEecCCCCceeEE
Q psy10063 756 LAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA------TA-GFLLSCPDFLFDFDTTREVTTTSTKVGKFDAR 828 (894)
Q Consensus 756 ~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~------~~-~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~ 828 (894)
..+|.++|.+++|+||| ||+++.|+.|++|++...+. +. .+...+.+++|+ |+.+++++ ++ .|+
T Consensus 178 ~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~----tIk 248 (588)
T 2j04_A 178 DAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PG----YVH 248 (588)
T ss_dssp CTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SS----EEE
T ss_pred cccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CC----eEE
Confidence 24578899999999999 88889999999999987773 21 344567788999 68888886 33 699
Q ss_pred EeecCCcceeeeccCCCCCeeEEEE--eeCCcEEEEecCCCcEEEEecC
Q psy10063 829 FYHLIFEEEFARIKGHFGPINSLAF--HPDGKSYASGGEDGFVRLHTFD 875 (894)
Q Consensus 829 vwd~~tg~~l~~l~gH~~~V~~l~f--Spdg~~LaS~s~Dg~V~vWdl~ 875 (894)
+||+..++......+|...|.+|+| +||+..|+++++||. +||.++
T Consensus 249 LWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 249 KIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 9999988774444489999999999 999999999999999 999987
No 114
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=5.3e-26 Score=246.98 Aligned_cols=184 Identities=16% Similarity=0.330 Sum_probs=151.1
Q ss_pred EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------
Q psy10063 404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV------- 476 (894)
Q Consensus 404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------- 476 (894)
.+.+|...|.+|+|+|+|++|++|+.||.|+|||++++++++.+.+|.. .+.+ +++++.+|++++.++.+
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~-~~~~--~~~~~~~l~s~~~~~~~~~~~~~~ 138 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA-RVGS--LSWNSYILSSGSRSGHIHHHDVRV 138 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEE--EEEETTEEEEEETTSEEEEEETTS
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccc-eEEE--eecCCCEEEEEecCCceEeeecCC
Confidence 4457889999999999999999999999999999999999999999987 6655 45567899999887755
Q ss_pred ------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEE----EE-EeCCCCeeEEEEcCCCCEEEE-EE--
Q psy10063 477 ------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLL----KT-YTTERPVNSAALSPILPHVVL-GG-- 536 (894)
Q Consensus 477 ------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~----~~-~~~~~~v~~l~~spdg~~l~~-~~-- 536 (894)
..+.+++|.+++++|++++.||.|+|||++.++.. .. ..+.+.|.++++++++..++. ++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 218 (318)
T 4ggc_A 139 AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 218 (318)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT
T ss_pred CceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecC
Confidence 57889999999999999999999999999876532 22 234678999999998775543 22
Q ss_pred CCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe--CCCcEEEEECCCC
Q psy10063 537 GQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG--EDGFLISNTLSNG 605 (894)
Q Consensus 537 ~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs--~Dg~I~vwdl~~~ 605 (894)
.++. |++||...+...... .|...+..+.|+++++.+++++ .|+.|+|||++.+
T Consensus 219 ~~~~--------------i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~ 274 (318)
T 4ggc_A 219 SDRH--------------IRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 274 (318)
T ss_dssp TTCE--------------EEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred CCCE--------------EEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC
Confidence 2332 899999888776654 5677899999999999887765 7999999998654
No 115
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=9.1e-27 Score=254.44 Aligned_cols=187 Identities=14% Similarity=0.239 Sum_probs=152.2
Q ss_pred ccceeeeeccCccEEEecCCC-e------------EEEEEecCCCCEEEEEEcc--CCCEEEEecCCCcEEEEecCCC--
Q psy10063 379 SVDRLNSMSPAARKLATNAEP-V------------VKMQVTDQSAKITSLLWGN--LDQYIITGHAKGDICTWDLRMG-- 441 (894)
Q Consensus 379 ~~~~~~~~s~dg~~l~~~~~~-~------------~~~~l~~H~~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg-- 441 (894)
.....++|++||++|+.++.+ . ....+.+|.+.|.+|+|++ ++++|++|+.|+.|+|||++.+
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW 93 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC
T ss_pred CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc
Confidence 445567888999888876543 1 2335789999999999986 4899999999999999999987
Q ss_pred eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC--CCEEEEEECCCCEEEEEcCCCcEEE---EEe-
Q psy10063 442 RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD--ATMFITASKDHTAKLFTTHDRQLLK---TYT- 515 (894)
Q Consensus 442 ~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~~~~---~~~- 515 (894)
+.+..+.+|.. .|.+|+|+|+ +.+|++|+.|+.|+|||++.+.... .+.
T Consensus 94 ~~~~~~~~h~~-------------------------~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~ 148 (316)
T 3bg1_A 94 EKSHEHAGHDS-------------------------SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNA 148 (316)
T ss_dssp CEEEEECCCSS-------------------------CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTS
T ss_pred eEEEEccCCCC-------------------------ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecc
Confidence 45677888887 6777777776 7899999999999999998764322 222
Q ss_pred CCCCeeEEEEcCC-----------------CCEEEEEECCCCeEEEeccCccceeeEEEEecccc---ceEEEccCCCCC
Q psy10063 516 TERPVNSAALSPI-----------------LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE---EEFARIKGHFGP 575 (894)
Q Consensus 516 ~~~~v~~l~~spd-----------------g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~---~~~~~l~~h~~~ 575 (894)
|...|.+++|+|+ +++|++++.|+. |++||++.+ +++..+.+|...
T Consensus 149 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~--------------v~lWd~~~~~~~~~~~~l~~h~~~ 214 (316)
T 3bg1_A 149 HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNL--------------IKLWKEEEDGQWKEEQKLEAHSDW 214 (316)
T ss_dssp SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSB--------------CCEEEECTTSCEEEEECCBCCSSC
T ss_pred ccCCcceEEEccccCCccccccccccCccccceEEEecCCCe--------------EEEEEeCCCCccceeeecccCCCc
Confidence 4578999999998 468999999987 778887644 466778999999
Q ss_pred eEEEEEecCC----CEEEEEeCCCcEEEEECCC
Q psy10063 576 INSLAFHPDG----KSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 576 V~~l~~spdg----~~l~sgs~Dg~I~vwdl~~ 604 (894)
|.+++|+|++ .+|++++.||.|+||+++.
T Consensus 215 V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 215 VRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp EEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred eEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 9999999986 7899999999999999854
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=2.3e-26 Score=251.96 Aligned_cols=192 Identities=13% Similarity=0.180 Sum_probs=156.6
Q ss_pred CCCccceeeeeccCccEEEecCCC-e--------------EEEEEecCCCCEEEEEEcc--CCCEEEEecCCCcEEEEec
Q psy10063 376 SPLSVDRLNSMSPAARKLATNAEP-V--------------VKMQVTDQSAKITSLLWGN--LDQYIITGHAKGDICTWDL 438 (894)
Q Consensus 376 ~~~~~~~~~~~s~dg~~l~~~~~~-~--------------~~~~l~~H~~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~ 438 (894)
.+......++|+++|++|+.+..+ . +...+.+|.+.|.+|+|+| |+++|++|+.||.|+|||+
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~ 88 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEE 88 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred ccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEec
Confidence 334455666788888877766432 2 3335578999999999999 6999999999999999999
Q ss_pred CCC---------eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC--CCEEEEEECCCCEEEEEcCC
Q psy10063 439 RMG---------RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD--ATMFITASKDHTAKLFTTHD 507 (894)
Q Consensus 439 ~tg---------~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~ 507 (894)
..+ +.+..+.+|.. .|.+++|+|+ +.+|++++.||.|+|||++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 89 DPDQEECSGRRWNKLCTLNDSKG-------------------------SLYSVKFAPAHLGLKLACLGNDGILRLYDALE 143 (351)
T ss_dssp CTTSCTTSSCSEEEEEEECCCSS-------------------------CEEEEEECCGGGCSEEEEEETTCEEEEEECSS
T ss_pred CCCcccccccCcceeeeecccCC-------------------------ceeEEEEcCCCCCcEEEEecCCCcEEEecCCC
Confidence 887 66777888877 7888888888 99999999999999999998
Q ss_pred CcEEEEE--------------eCCCCeeEEEEcCC---CCEEEEEECCCCeEEEeccCccceeeEEEEeccccce--EEE
Q psy10063 508 RQLLKTY--------------TTERPVNSAALSPI---LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE--FAR 568 (894)
Q Consensus 508 ~~~~~~~--------------~~~~~v~~l~~spd---g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~--~~~ 568 (894)
++.+..+ .+...+.+++|+|+ +.+|++++.++. +.+|+...++. +..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~--------------~~~~~~~~~~~~~~~~ 209 (351)
T 3f3f_A 144 PSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQA--------------IIYQRGKDGKLHVAAK 209 (351)
T ss_dssp TTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEE--------------EEEEECTTSCEEEEEE
T ss_pred hHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCc--------------EEEEccCCCceeeeee
Confidence 7754332 23467999999997 899999999886 55566555554 677
Q ss_pred ccCCCCCeEEEEEecCC----CEEEEEeCCCcEEEEECCCCc
Q psy10063 569 IKGHFGPINSLAFHPDG----KSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 569 l~~h~~~V~~l~~spdg----~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
+.+|...|.+++|+|++ ++|++|+.||.|++||++.+.
T Consensus 210 ~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~ 251 (351)
T 3f3f_A 210 LPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL 251 (351)
T ss_dssp CCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC
T ss_pred cCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCc
Confidence 88999999999999998 899999999999999997653
No 117
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.95 E-value=5.8e-25 Score=279.10 Aligned_cols=385 Identities=9% Similarity=0.016 Sum_probs=259.4
Q ss_pred EEEEecCCCCEEEEEEccCCCEEEEecCC------CcEEEEecCCCeEEEEecCCCCCCe-------eEEEEcCCCCEEE
Q psy10063 402 KMQVTDQSAKITSLLWGNLDQYIITGHAK------GDICTWDLRMGRELESISGHAKEPI-------NDMQFSKDATMFI 468 (894)
Q Consensus 402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~D------g~I~iWd~~tg~~~~~l~~h~~~~V-------~~v~~spdg~~la 468 (894)
...+.+|...|.+++|||||++||+++.+ ..|++||+..++ .+.+..|.. .+ ..++|+|||++++
T Consensus 45 ~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~-~~~~~~~~~~~~~~SpDg~ll~ 122 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSG-KSTGRRMFTDVAGFDPDGNLII 122 (1045)
T ss_dssp EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCE-EEETTEECSEEEEECTTCCEEE
T ss_pred EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCC-cccccccccccccCCCCCEEEE
Confidence 34677899999999999999999988643 479999999887 677888876 67 8999999999666
Q ss_pred EEeCC----C--Cc---------------cceEEEEEecCCCEEEEEEC------------CCCEEEEEcCC-CcEEEEE
Q psy10063 469 TASHS----Q--AV---------------EPINDMQFSKDATMFITASK------------DHTAKLFTTHD-RQLLKTY 514 (894)
Q Consensus 469 ~~~~d----~--~i---------------~~V~~l~~spdg~~L~sgs~------------Dg~V~iwdl~~-~~~~~~~ 514 (894)
+++.+ + .+ .....++|+| | +|++++. +...+||.... ++.....
T Consensus 123 ~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~ 200 (1045)
T 1k32_A 123 STDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIV 200 (1045)
T ss_dssp EECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEE
T ss_pred EECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCCCCeEECc
Confidence 66644 1 11 2334677999 8 8888753 33466775433 4444444
Q ss_pred eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-cceEEEccCCCCCeEEEEEecCCCEEEEEeC
Q psy10063 515 TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF-EEEFARIKGHFGPINSLAFHPDGKSYASGGE 593 (894)
Q Consensus 515 ~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~-~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~ 593 (894)
.|...+.+++|+++ .+++++..++. +++|.+.. +.....+..|. .+..++|+|||++|+++.
T Consensus 201 ~~~~~v~~~~~s~d-~l~~~~~~dg~--------------~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~- 263 (1045)
T 1k32_A 201 DMSTHVSSPVIVGH-RIYFITDIDGF--------------GQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK- 263 (1045)
T ss_dssp CCSSCCEEEEEETT-EEEEEECTTSS--------------CEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE-
T ss_pred CCCCcccceEEeCC-EEEEEEeccCc--------------eEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe-
Confidence 46788999999988 45555555555 45555432 34455565555 467789999999998874
Q ss_pred CCcEEEEECCCCccccC--------------CCceeeeEEC-cCCcEEE-ecCCeEEEEecccCCCCCCCeeeeccccCC
Q psy10063 594 DGFLISNTLSNGLDISE--------------GSFTSSSTQQ-PDGLVYP-SQGGHIHSLSSHSTSSTDTGGVFSGSRVDD 657 (894)
Q Consensus 594 Dg~I~vwdl~~~~~~~~--------------~~~v~~~~~s-pdg~~l~-~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d 657 (894)
++.|++|++...+.... ...+..++|+ |+|+.++ ...+.+..+....
T Consensus 264 ~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~----------------- 326 (1045)
T 1k32_A 264 GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSG----------------- 326 (1045)
T ss_dssp TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTS-----------------
T ss_pred CCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCC-----------------
Confidence 89999999844332111 1146778888 8887552 2233333332110
Q ss_pred CceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcce-
Q psy10063 658 SGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLM- 736 (894)
Q Consensus 658 ~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~- 736 (894)
+.... +..... .....+.++ +|+.+++...+ ..+.
T Consensus 327 -----------------------~~~~~-----------~~~~~~--~~~~~~~~s-dg~~l~~~s~~-------~~l~~ 362 (1045)
T 1k32_A 327 -----------------------TYVLK-----------VPEPLR--IRYVRRGGD-TKVAFIHGTRE-------GDFLG 362 (1045)
T ss_dssp -----------------------SBEEE-----------CSCCSC--EEEEEECSS-SEEEEEEEETT-------EEEEE
T ss_pred -----------------------CceEE-----------ccCCCc--ceEEeeeEc-CCCeEEEEECC-------CceEE
Confidence 00000 000000 011123444 55555443321 1222
Q ss_pred eeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee---ccccCCCceEeecCCCe
Q psy10063 737 TWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA---GFLLSCPDFLFDFDTTR 813 (894)
Q Consensus 737 ~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~---~~~~~~~~~~fS~dg~~ 813 (894)
+|+.. +.....+.+|...+.+++|+|||++||+++.++.|++||+..++... .+...+..++|||||++
T Consensus 363 ~~d~~--------~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~ 434 (1045)
T 1k32_A 363 IYDYR--------TGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRF 434 (1045)
T ss_dssp EEETT--------TCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCE
T ss_pred EEECC--------CCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCe
Confidence 33222 22222333677889999999999999999999999999998877643 23344568899999999
Q ss_pred EEEEecCC------CCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063 814 EVTTTSTK------VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQA 877 (894)
Q Consensus 814 l~~as~d~------~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~ 877 (894)
|++++.+. .+...|++||+..++ +..+..|...+.+++|+|||++|++++.++.+++|+....
T Consensus 435 la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 435 IAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp EEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred EEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence 99887654 223469999999887 6778889999999999999999999999998888886533
No 118
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=4.1e-25 Score=259.18 Aligned_cols=325 Identities=8% Similarity=-0.017 Sum_probs=237.5
Q ss_pred EEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE
Q psy10063 416 LWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS 495 (894)
Q Consensus 416 ~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs 495 (894)
+|+|+++++++++.|+.|.|||..+++++..+..+. .+.+++|+|||++|++++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~--------------------------~~~~v~~spdg~~l~v~~ 197 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY--------------------------AVHISRMSASGRYLLVIG 197 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST--------------------------TEEEEEECTTSCEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc--------------------------ccceEEECCCCCEEEEEC
Confidence 489999999999999999999999999999888543 367888899999999999
Q ss_pred CCCCEEEEEc--CCCcEEEEEeCCCCeeEEEEcC----CCCEEEEEEC-CCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063 496 KDHTAKLFTT--HDRQLLKTYTTERPVNSAALSP----ILPHVVLGGG-QEAREVTTTSTKVGKFDARFYHLIFEEEFAR 568 (894)
Q Consensus 496 ~Dg~V~iwdl--~~~~~~~~~~~~~~v~~l~~sp----dg~~l~~~~~-~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~ 568 (894)
.|+.|++||+ .+++++..+.++..+..++|+| ||++|++++. ++. |.+||..+++++..
T Consensus 198 ~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~--------------v~v~D~~t~~~~~~ 263 (543)
T 1nir_A 198 RDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQ--------------FAIMDGETLEPKQI 263 (543)
T ss_dssp TTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSE--------------EEEEETTTCCEEEE
T ss_pred CCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCe--------------EEEEecccccccee
Confidence 9999999999 8999999999888899999999 9999999985 443 88999999998887
Q ss_pred ccCC----------C-CCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccc-----cCCCceeeeEECcCCcEEEecCC
Q psy10063 569 IKGH----------F-GPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDI-----SEGSFTSSSTQQPDGLVYPSQGG 631 (894)
Q Consensus 569 l~~h----------~-~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~-----~~~~~v~~~~~spdg~~l~~~~g 631 (894)
+..+ . ..+.++.+++++. ++++...++.|.+||+...+.+ ..+..+..+.|+|+|+++..
T Consensus 264 i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~v--- 340 (543)
T 1nir_A 264 VSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMT--- 340 (543)
T ss_dssp EECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEE---
T ss_pred ecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEE---
Confidence 7642 2 3789999999776 4566778899999999875422 23455666777777664411
Q ss_pred eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063 632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS 711 (894)
Q Consensus 632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 711 (894)
++. .+..|.+|+..
T Consensus 341 --------------------a~~-~~~~v~v~D~~--------------------------------------------- 354 (543)
T 1nir_A 341 --------------------AAN-NSNKVAVIDSK--------------------------------------------- 354 (543)
T ss_dssp --------------------EEG-GGTEEEEEETT---------------------------------------------
T ss_pred --------------------Eec-CCCeEEEEECC---------------------------------------------
Confidence 100 12233333311
Q ss_pred EcCCCCEEEecccCccccccCCcceeeccccCcccc-cCCCCcceecCCCCceEEEeeCCC-CCEEEEec-CCCcEEEEE
Q psy10063 712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFK-LDGSDTPILAGPVDIGFKMPEPPK-REKLALAL-ADKVSERYR 788 (894)
Q Consensus 712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~-~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs-~Dg~I~iwd 788 (894)
.+.+.. +... ...|.+....+ ++|+ +.+++++. .|+.|.|||
T Consensus 355 ------------------------------tg~l~~~i~~g----~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d 399 (543)
T 1nir_A 355 ------------------------------DRRLSALVDVG----KTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIG 399 (543)
T ss_dssp ------------------------------TTEEEEEEECS----SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEE
T ss_pred ------------------------------CCeEEEeeccC----CCCCCCCCccc-CCCCCccEEEeccCCCceEEEEE
Confidence 000000 0000 00133223333 4676 66667765 689999999
Q ss_pred ccC-------Cceeecccc---CCCceEeecCCCeEEEEecCCC---CceeEEEeecCCccee-eec--------cCCCC
Q psy10063 789 DRK-------NKATAGFLL---SCPDFLFDFDTTREVTTTSTKV---GKFDARFYHLIFEEEF-ARI--------KGHFG 846 (894)
Q Consensus 789 ~~~-------~~~~~~~~~---~~~~~~fS~dg~~l~~as~d~~---g~~~I~vwd~~tg~~l-~~l--------~gH~~ 846 (894)
... .+.+..+.. +...+.|+|+|++|++...... ..-.|.|||+.+++++ ..+ ..|..
T Consensus 400 ~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~ 479 (543)
T 1nir_A 400 TDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAK 479 (543)
T ss_dssp CCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCC
T ss_pred eCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCC
Confidence 988 666665553 3356889999999999872110 0115999999998877 443 46678
Q ss_pred CeeEEEEeeCCcEEEEe-----cCCCcEEEEecCccccccccc
Q psy10063 847 PINSLAFHPDGKSYASG-----GEDGFVRLHTFDQAYFDYTFD 884 (894)
Q Consensus 847 ~V~~l~fSpdg~~LaS~-----s~Dg~V~vWdl~~~~~~~~~~ 884 (894)
.|..++|++||++|+++ +.|+.|.|||.++++++..++
T Consensus 480 ~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 480 RVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp EEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred ceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence 89999999999988865 358999999999999988766
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.94 E-value=5.6e-25 Score=251.44 Aligned_cols=273 Identities=14% Similarity=0.215 Sum_probs=203.8
Q ss_pred ceeeeeccCccEEEecCCC-----------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC
Q psy10063 381 DRLNSMSPAARKLATNAEP-----------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG 449 (894)
Q Consensus 381 ~~~~~~s~dg~~l~~~~~~-----------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~ 449 (894)
..+.++..||++|+.+..+ .....+.+|.+.|.+++| ++++|++|+.||.|+|||+.+++++..+.+
T Consensus 134 ~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 211 (435)
T 1p22_A 134 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIH 211 (435)
T ss_dssp CCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECC
T ss_pred CcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcC
Confidence 3455666677777765432 334467899999999999 789999999999999999999999999999
Q ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEE---EEEe-CCCCeeEEEE
Q psy10063 450 HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLL---KTYT-TERPVNSAAL 525 (894)
Q Consensus 450 h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~---~~~~-~~~~v~~l~~ 525 (894)
|.. .|.+++|+ +.+|++|+.||.|++||++.++.+ ..+. |...|.+++|
T Consensus 212 h~~-------------------------~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 264 (435)
T 1p22_A 212 HCE-------------------------AVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF 264 (435)
T ss_dssp CCS-------------------------CEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred CCC-------------------------cEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe
Confidence 987 67777775 458999999999999999987765 3343 4678999999
Q ss_pred cCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063 526 SPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 526 spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~ 605 (894)
++.+|++++.++. |++||+..++.+..+.+|...|.+++| ++.+|++|+.||.|++||++.+
T Consensus 265 --~~~~l~s~~~dg~--------------i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 265 --DDKYIVSASGDRT--------------IKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp --ETTEEEEEETTSE--------------EEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTC
T ss_pred --CCCEEEEEeCCCe--------------EEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCC
Confidence 7899999999996 899999999999999999999999999 4789999999999999998654
Q ss_pred ccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEE
Q psy10063 606 LDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLH 685 (894)
Q Consensus 606 ~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~ 685 (894)
+.+
T Consensus 327 ~~~----------------------------------------------------------------------------- 329 (435)
T 1p22_A 327 ACL----------------------------------------------------------------------------- 329 (435)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred CEE-----------------------------------------------------------------------------
Confidence 211
Q ss_pred eeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEE
Q psy10063 686 VNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFK 765 (894)
Q Consensus 686 ~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~ 765 (894)
..+.+|...|.+
T Consensus 330 --------------------------------------------------------------------~~~~~h~~~v~~ 341 (435)
T 1p22_A 330 --------------------------------------------------------------------RVLEGHEELVRC 341 (435)
T ss_dssp --------------------------------------------------------------------EEECCCSSCEEE
T ss_pred --------------------------------------------------------------------EEEeCCcCcEEE
Confidence 012346667888
Q ss_pred EeeCCCCCEEEEecCCCcEEEEEccCCc---------eee---ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecC
Q psy10063 766 MPEPPKREKLALALADKVSERYRDRKNK---------ATA---GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLI 833 (894)
Q Consensus 766 la~spdg~~Latgs~Dg~I~iwd~~~~~---------~~~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~ 833 (894)
++| ++.+|++|+.||.|++||+...+ .+. .+...+..++| ++.++++++.|+ .|+|||+.
T Consensus 342 ~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg----~i~iwd~~ 413 (435)
T 1p22_A 342 IRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDD----TILIWDFL 413 (435)
T ss_dssp EEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSS----EEEEEC--
T ss_pred EEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCC----EEEEEECC
Confidence 888 78999999999999999987654 332 33334445556 899999998887 69999998
Q ss_pred CcceeeeccCCCCCeeEEEEe
Q psy10063 834 FEEEFARIKGHFGPINSLAFH 854 (894)
Q Consensus 834 tg~~l~~l~gH~~~V~~l~fS 854 (894)
.+....... ...++.++.|.
T Consensus 414 ~~~~~~~~~-~~~~~~~~~~~ 433 (435)
T 1p22_A 414 NDPAAQAEP-PRSPSRTYTYI 433 (435)
T ss_dssp ---------------------
T ss_pred CCCCcccCC-CCCCccceeee
Confidence 776554332 22344455554
No 120
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=3.2e-25 Score=245.51 Aligned_cols=259 Identities=17% Similarity=0.131 Sum_probs=201.9
Q ss_pred EEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC---CCEEEEEECCCCEEEEEcCC-CcE
Q psy10063 435 TWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD---ATMFITASKDHTAKLFTTHD-RQL 510 (894)
Q Consensus 435 iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd---g~~L~sgs~Dg~V~iwdl~~-~~~ 510 (894)
.|+....+.++.+.+|.+ .|.+|+|+|+ |++|++|+.||.|+|||++. ++.
T Consensus 23 ~~~~~~~~~~~~~~~h~~-------------------------~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~ 77 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDD-------------------------SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQT 77 (368)
T ss_dssp CCSSCTTCCEECSSCCSS-------------------------CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCE
T ss_pred cCCCCCcceeEeccCCCC-------------------------ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCce
Confidence 345566677788888887 7888888887 69999999999999999997 555
Q ss_pred E-EEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEE--ecCCC
Q psy10063 511 L-KTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF--HPDGK 586 (894)
Q Consensus 511 ~-~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~--spdg~ 586 (894)
+ ..+. |...|.+++|+|++++|++++.++. |++||+..++.+. +.+|...|.+++| ++++.
T Consensus 78 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~--------------v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~ 142 (368)
T 3mmy_A 78 IPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT--------------AKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYS 142 (368)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEEETTSE--------------EEEEETTTTEEEE-EEECSSCEEEEEEEECSSCE
T ss_pred eEEEeccccCCEEEEEECcCCCEEEEEcCCCc--------------EEEEEcCCCCcee-eccccCceEEEEEEeCCCCC
Confidence 4 4454 5789999999999999999999986 8999999888766 5679999999999 88999
Q ss_pred EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechh
Q psy10063 587 SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDE 666 (894)
Q Consensus 587 ~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~ 666 (894)
+|++++.||.|++||++.++.+. .+.
T Consensus 143 ~l~~~~~dg~i~vwd~~~~~~~~-------------------------~~~----------------------------- 168 (368)
T 3mmy_A 143 CVMTGSWDKTLKFWDTRSSNPMM-------------------------VLQ----------------------------- 168 (368)
T ss_dssp EEEEEETTSEEEEECSSCSSCSE-------------------------EEE-----------------------------
T ss_pred EEEEccCCCcEEEEECCCCcEEE-------------------------EEe-----------------------------
Confidence 99999999999999987643210 000
Q ss_pred hHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCccc
Q psy10063 667 QIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPF 746 (894)
Q Consensus 667 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~ 746 (894)
T Consensus 169 -------------------------------------------------------------------------------- 168 (368)
T 3mmy_A 169 -------------------------------------------------------------------------------- 168 (368)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc-----cCCCceEeecCCCe----EEEE
Q psy10063 747 KLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL-----LSCPDFLFDFDTTR----EVTT 817 (894)
Q Consensus 747 ~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~-----~~~~~~~fS~dg~~----l~~a 817 (894)
.+ ..+.++.+. ...+++++.++.+++|++.......... .....+.+.+++.. ++++
T Consensus 169 -----------~~-~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (368)
T 3mmy_A 169 -----------LP-ERCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALG 234 (368)
T ss_dssp -----------CS-SCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEE
T ss_pred -----------cC-CCceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEe
Confidence 00 012233333 3477888899999999988765533222 12234455665554 8888
Q ss_pred ecCCCCceeEEEeecCCc---ceeeeccCCCC------------CeeEEEEeeCCcEEEEecCCCcEEEEecCccccccc
Q psy10063 818 TSTKVGKFDARFYHLIFE---EEFARIKGHFG------------PINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYT 882 (894)
Q Consensus 818 s~d~~g~~~I~vwd~~tg---~~l~~l~gH~~------------~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~ 882 (894)
+.++ .|+|||+... +.+..+.+|.. .|.+|+|+|++++|++++.||.|+|||++.++++..
T Consensus 235 ~~dg----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~ 310 (368)
T 3mmy_A 235 SIEG----RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT 310 (368)
T ss_dssp ETTS----EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE
T ss_pred cCCC----cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEE
Confidence 8877 6999999887 66777888876 799999999999999999999999999999888777
Q ss_pred ccc
Q psy10063 883 FDI 885 (894)
Q Consensus 883 ~~~ 885 (894)
+..
T Consensus 311 ~~~ 313 (368)
T 3mmy_A 311 SEQ 313 (368)
T ss_dssp CCC
T ss_pred ecC
Confidence 653
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.5e-25 Score=255.58 Aligned_cols=239 Identities=7% Similarity=-0.001 Sum_probs=194.6
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCc---EEEEEeCC-------------------------------------
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQ---LLKTYTTE------------------------------------- 517 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~---~~~~~~~~------------------------------------- 517 (894)
++.+|+|+++|++|+++ .++.|++||+.+|+ .+..+..+
T Consensus 6 p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 6 PLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred cEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 67889999999966655 57889999999998 66555422
Q ss_pred ------------------CCeeEEEEcCCCCEE-EEEECCCCeEEEeccCccceeeEEEEecc--ccceEEEcc--CCCC
Q psy10063 518 ------------------RPVNSAALSPILPHV-VLGGGQEAREVTTTSTKVGKFDARFYHLI--FEEEFARIK--GHFG 574 (894)
Q Consensus 518 ------------------~~v~~l~~spdg~~l-~~~~~~~~~~v~~~~~~~~~~~v~vwd~~--~~~~~~~l~--~h~~ 574 (894)
..|.+++|+|+|++| ++++.++. |++||+. .++.+..+. .|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~--------------v~iwd~~~~~~~~~~~~~~~~~~~ 150 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKS--------------LLVFDVDKTSKNVLKLRKRFCFSK 150 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGGGTE--------------EEEEEECSSSSSCEEEEEEEECSS
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCe--------------EEEEECcCCCCceeeeeecccCCC
Confidence 159999999999997 67777776 8899998 888888776 5678
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccc
Q psy10063 575 PINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSR 654 (894)
Q Consensus 575 ~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~ 654 (894)
.|.+|+|+|++++|++|+.||.|++|++..++....
T Consensus 151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~-------------------------------------------- 186 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKF-------------------------------------------- 186 (450)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSC--------------------------------------------
T ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccc--------------------------------------------
Confidence 999999999999999999999999999865421100
Q ss_pred cCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCc
Q psy10063 655 VDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASP 734 (894)
Q Consensus 655 ~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~ 734 (894)
T Consensus 187 -------------------------------------------------------------------------------- 186 (450)
T 2vdu_B 187 -------------------------------------------------------------------------------- 186 (450)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeccccCcccccCCCCcceecCCCCceEEEeeCCC---CCEEEEecCCCcEEEEEccCCceeeccc----cCCCceEe
Q psy10063 735 LMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK---REKLALALADKVSERYRDRKNKATAGFL----LSCPDFLF 807 (894)
Q Consensus 735 l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd---g~~Latgs~Dg~I~iwd~~~~~~~~~~~----~~~~~~~f 807 (894)
....+.+|...|.+|+|+|+ +++|++++.|+.|+|||+..++.+..+. ..+..++|
T Consensus 187 -----------------~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~ 249 (450)
T 2vdu_B 187 -----------------TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICC 249 (450)
T ss_dssp -----------------CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEE
T ss_pred -----------------cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEE
Confidence 00123457778999999999 9999999999999999999887765533 34557889
Q ss_pred ecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCC-------------------------CCCeeEEEEeeCCcEEEE
Q psy10063 808 DFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGH-------------------------FGPINSLAFHPDGKSYAS 862 (894)
Q Consensus 808 S~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH-------------------------~~~V~~l~fSpdg~~LaS 862 (894)
+ ++++|++++.++ .|+|||+..++++..+..| ...|.+|+|+|++++|++
T Consensus 250 s-d~~~l~s~~~d~----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 324 (450)
T 2vdu_B 250 G-KDYLLLSAGGDD----KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAF 324 (450)
T ss_dssp C-STTEEEEEESSS----EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEE
T ss_pred C-CCCEEEEEeCCC----eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEE
Confidence 9 999999999887 6999999999988777632 357999999999999999
Q ss_pred ec-CCCcEEEEec--Ccc
Q psy10063 863 GG-EDGFVRLHTF--DQA 877 (894)
Q Consensus 863 ~s-~Dg~V~vWdl--~~~ 877 (894)
++ .|+.|+||++ ..+
T Consensus 325 ~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 325 FVEATKCIIILEMSEKQK 342 (450)
T ss_dssp EETTCSEEEEEEECSSST
T ss_pred EECCCCeEEEEEeccCCC
Confidence 88 8999999999 544
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=2.6e-24 Score=245.14 Aligned_cols=292 Identities=11% Similarity=0.028 Sum_probs=221.6
Q ss_pred EEEecCCCCEEEEE---EccCCCEEEEe--------------cCCC--cEEEEecCCC--eEEEEecCCCCCCeeEEEEc
Q psy10063 403 MQVTDQSAKITSLL---WGNLDQYIITG--------------HAKG--DICTWDLRMG--RELESISGHAKEPINDMQFS 461 (894)
Q Consensus 403 ~~l~~H~~~V~~l~---~spdg~~L~sg--------------s~Dg--~I~iWd~~tg--~~~~~l~~h~~~~V~~v~~s 461 (894)
+....+...+..++ |+|+++.++.. +.++ .|.+||...+ +.+..+..+.
T Consensus 54 ~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~---------- 123 (433)
T 3bws_A 54 VLEMDKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGF---------- 123 (433)
T ss_dssp EEEEETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSS----------
T ss_pred eeecccCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCC----------
Confidence 33345667788888 88887766543 2233 3444444334 4555555443
Q ss_pred CCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe------CCCCeeEEEEcCCCCEEEEE
Q psy10063 462 KDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT------TERPVNSAALSPILPHVVLG 535 (894)
Q Consensus 462 pdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~------~~~~v~~l~~spdg~~l~~~ 535 (894)
.+.+++|+|++.++++++.|+.|++||+.+++++..+. +...|.+++|++++++++++
T Consensus 124 ----------------~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~ 187 (433)
T 3bws_A 124 ----------------QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQ 187 (433)
T ss_dssp ----------------CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEE
T ss_pred ----------------CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEE
Confidence 35688888877778888888999999999999887443 34689999999999999998
Q ss_pred ECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECCCCccccCCCce
Q psy10063 536 GGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLSNGLDISEGSFT 614 (894)
Q Consensus 536 ~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~~~~~~~~~~~v 614 (894)
+.++. |++||++.++.+..+..|...+.+++|++++++|+++ +.|+.|++||++.++.+.
T Consensus 188 ~~d~~--------------v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~----- 248 (433)
T 3bws_A 188 MQANA--------------VHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR----- 248 (433)
T ss_dssp GGGTE--------------EEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-----
T ss_pred CCCCE--------------EEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE-----
Confidence 88876 8999999999999999999999999999999988554 479999999986542110
Q ss_pred eeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcce
Q psy10063 615 SSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQS 694 (894)
Q Consensus 615 ~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 694 (894)
T Consensus 249 -------------------------------------------------------------------------------- 248 (433)
T 3bws_A 249 -------------------------------------------------------------------------------- 248 (433)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCE
Q psy10063 695 VELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREK 774 (894)
Q Consensus 695 ~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~ 774 (894)
.+. +...+.+++|+|++++
T Consensus 249 ------------------------------------------------------------~~~-~~~~~~~~~~~~~g~~ 267 (433)
T 3bws_A 249 ------------------------------------------------------------KTD-KIGLPRGLLLSKDGKE 267 (433)
T ss_dssp ------------------------------------------------------------ECC-CCSEEEEEEECTTSSE
T ss_pred ------------------------------------------------------------Eec-CCCCceEEEEcCCCCE
Confidence 000 0122568889999999
Q ss_pred EEEec--------CCCcEEEEEccCCceeecc--ccCCCceEeecCCCeEEEE-ecCCCCceeEEEeecCCcceeeeccC
Q psy10063 775 LALAL--------ADKVSERYRDRKNKATAGF--LLSCPDFLFDFDTTREVTT-TSTKVGKFDARFYHLIFEEEFARIKG 843 (894)
Q Consensus 775 Latgs--------~Dg~I~iwd~~~~~~~~~~--~~~~~~~~fS~dg~~l~~a-s~d~~g~~~I~vwd~~tg~~l~~l~g 843 (894)
|++++ .|+.|++||+..++.+... ......++|++++++++++ ..++ .|++||+..++++..+.
T Consensus 268 l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~----~v~v~d~~~~~~~~~~~- 342 (433)
T 3bws_A 268 LYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCS----KIEVYDLKEKKVQKSIP- 342 (433)
T ss_dssp EEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTT----EEEEEETTTTEEEEEEE-
T ss_pred EEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCC----EEEEEECCCCcEEEEec-
Confidence 98887 5889999999888765544 3345578899999877666 4444 69999999998887775
Q ss_pred CCCCeeEEEEeeCCcEEEEecC---------------CCcEEEEecCcccccccccc
Q psy10063 844 HFGPINSLAFHPDGKSYASGGE---------------DGFVRLHTFDQAYFDYTFDI 885 (894)
Q Consensus 844 H~~~V~~l~fSpdg~~LaS~s~---------------Dg~V~vWdl~~~~~~~~~~~ 885 (894)
|...+.+++|+|||++|++++. ||.|++||+..++.+..+..
T Consensus 343 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~ 399 (433)
T 3bws_A 343 VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA 399 (433)
T ss_dssp CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC
Confidence 6788999999999998888776 67999999998887776654
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.6e-25 Score=270.95 Aligned_cols=189 Identities=17% Similarity=0.244 Sum_probs=157.5
Q ss_pred CccceeeeeccCccEEEecCCC-------------eEEEEEecCCCCEEEEEEccC--CCEEEEecCCCcEEEEecCCCe
Q psy10063 378 LSVDRLNSMSPAARKLATNAEP-------------VVKMQVTDQSAKITSLLWGNL--DQYIITGHAKGDICTWDLRMGR 442 (894)
Q Consensus 378 ~~~~~~~~~s~dg~~l~~~~~~-------------~~~~~l~~H~~~V~~l~~spd--g~~L~sgs~Dg~I~iWd~~tg~ 442 (894)
......++|+++|++|+.++.+ .....+.+|.+.|.+++|+++ +++|++|+.||.|+|||+..++
T Consensus 9 ~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR 88 (753)
T ss_dssp CCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE
T ss_pred cceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 3445556777777777665432 223366789999999999998 9999999999999999999987
Q ss_pred --EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC--CCEEEEEECCCCEEEEEcCCCcE---EEEEe
Q psy10063 443 --ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD--ATMFITASKDHTAKLFTTHDRQL---LKTYT 515 (894)
Q Consensus 443 --~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~~---~~~~~ 515 (894)
.+..+.+|.. .|.+++|+|+ +.+|++|+.||.|+|||++.+.. .....
T Consensus 89 ~~~~~~~~~h~~-------------------------~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~ 143 (753)
T 3jro_A 89 WSQIAVHAVHSA-------------------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA 143 (753)
T ss_dssp EEEEEEECCCSS-------------------------CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC
T ss_pred ccccccccCCCC-------------------------CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec
Confidence 6777888887 7888888888 99999999999999999988732 23334
Q ss_pred CCCCeeEEEEcC-------------CCCEEEEEECCCCeEEEeccCccceeeEEEEecccc----ceEEEccCCCCCeEE
Q psy10063 516 TERPVNSAALSP-------------ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE----EEFARIKGHFGPINS 578 (894)
Q Consensus 516 ~~~~v~~l~~sp-------------dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~----~~~~~l~~h~~~V~~ 578 (894)
+...|.+++|+| ++.+|++++.++. |++||++.+ ..+..+.+|...|.+
T Consensus 144 ~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~--------------I~iwd~~~~~~~~~~~~~~~~h~~~V~~ 209 (753)
T 3jro_A 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL--------------VKIWKYNSDAQTYVLESTLEGHSDWVRD 209 (753)
T ss_dssp CSSCEEEEEECCCC---------CGGGCCEEEEETTSC--------------EEEEEEETTTTEEEEEEEECCCSSCEEE
T ss_pred CCCceEEEEecCcccccccccccCCCCCEEEEEECCCe--------------EEEEeccCCcccceeeeeecCCCCcEEE
Confidence 578999999999 5899999999997 788888766 556678899999999
Q ss_pred EEEecC---CCEEEEEeCCCcEEEEECCCC
Q psy10063 579 LAFHPD---GKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 579 l~~spd---g~~l~sgs~Dg~I~vwdl~~~ 605 (894)
++|+|+ +.+|++|+.||.|++||+..+
T Consensus 210 l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 210 VAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred EEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 999999 899999999999999998654
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=1.1e-24 Score=242.22 Aligned_cols=182 Identities=12% Similarity=0.136 Sum_probs=137.7
Q ss_pred CCccceeeeeccCccEEEecCCCeEEE--------EEecCCCCEEEEEEccCCCEE-EEecCCCcEEEEecCCCeEEEEe
Q psy10063 377 PLSVDRLNSMSPAARKLATNAEPVVKM--------QVTDQSAKITSLLWGNLDQYI-ITGHAKGDICTWDLRMGRELESI 447 (894)
Q Consensus 377 ~~~~~~~~~~s~dg~~l~~~~~~~~~~--------~l~~H~~~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~~~~~l 447 (894)
+......++|++||++|+.+..+.+++ .+..+...+..++|.++++++ ++|+.|+.|+|||+.+++++..+
T Consensus 18 h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~ 97 (355)
T 3vu4_A 18 VSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRI 97 (355)
T ss_dssp -CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEE
Confidence 344566779999999999888765443 122233468889999988877 56788899999999999999988
Q ss_pred cCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCC-cEEEEEeCCCCeeEEEEc
Q psy10063 448 SGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDR-QLLKTYTTERPVNSAALS 526 (894)
Q Consensus 448 ~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~-~~~~~~~~~~~v~~l~~s 526 (894)
.. .. .|.+++|++++ ++++ .|+.|+|||+..+ +++..+.. ....++++
T Consensus 98 ~~-~~-------------------------~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s 146 (355)
T 3vu4_A 98 KV-DA-------------------------PVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFS 146 (355)
T ss_dssp EC-SS-------------------------CEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEE
T ss_pred EC-CC-------------------------ceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEE
Confidence 74 34 46666666543 3433 4789999999988 66665554 45566777
Q ss_pred CCCCEEEEE--ECCCCeEEEeccCccceeeEEEEeccccc----------------eEEEccCCCCCeEEEEEecCCCEE
Q psy10063 527 PILPHVVLG--GGQEAREVTTTSTKVGKFDARFYHLIFEE----------------EFARIKGHFGPINSLAFHPDGKSY 588 (894)
Q Consensus 527 pdg~~l~~~--~~~~~~~v~~~~~~~~~~~v~vwd~~~~~----------------~~~~l~~h~~~V~~l~~spdg~~l 588 (894)
+ .+|+++ +.++. |++||+..++ ++..+.+|.+.|.+++|+|+|++|
T Consensus 147 ~--~~la~~sg~~~g~--------------v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l 210 (355)
T 3vu4_A 147 N--GLLVYSNEFNLGQ--------------IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMV 210 (355)
T ss_dssp T--TEEEEEESSCTTC--------------EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEE
T ss_pred c--cEEEEeCCCcCcE--------------EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEE
Confidence 7 677775 55565 8888888765 267789999999999999999999
Q ss_pred EEEeCCCc-EEEEECCCC
Q psy10063 589 ASGGEDGF-LISNTLSNG 605 (894)
Q Consensus 589 ~sgs~Dg~-I~vwdl~~~ 605 (894)
++|+.||. |+|||++.+
T Consensus 211 ~s~s~d~~~v~iwd~~~~ 228 (355)
T 3vu4_A 211 ATCSQDGTIIRVFKTEDG 228 (355)
T ss_dssp EEEETTCSEEEEEETTTC
T ss_pred EEEeCCCCEEEEEECCCC
Confidence 99999998 999998754
No 125
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.9e-25 Score=246.84 Aligned_cols=238 Identities=11% Similarity=0.022 Sum_probs=190.4
Q ss_pred EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063 484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE 563 (894)
Q Consensus 484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~ 563 (894)
+..++.+|++|+.||.|+|||+.+++++..+. ...|.+++|+|+ |++++.|+.+++|..... +.+|++..+
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~-----~~~~~~~~~ 114 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQ-----ITILDSKTN 114 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS---EEEECSTTEEEEEETTTE-----EEEEETTTC
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc---eEEecCCCeEEEEEccCc-----eEEeecCCc
Confidence 34578899999999999999999999988877 456788889988 999999999999987753 788999988
Q ss_pred ceEEEcc-CCCCCeEEEEEec--CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063 564 EEFARIK-GHFGPINSLAFHP--DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS 640 (894)
Q Consensus 564 ~~~~~l~-~h~~~V~~l~~sp--dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~ 640 (894)
+.++.+. +|.+.|.+++|+| ++++|++++.||.|++||++.++.+. +
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~--------------------------~---- 164 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYI--------------------------V---- 164 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEE--------------------------E----
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEE--------------------------E----
Confidence 8776665 7888999999999 99999999999999999986542100 0
Q ss_pred CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063 641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH 720 (894)
Q Consensus 641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~ 720 (894)
T Consensus 165 -------------------------------------------------------------------------------- 164 (343)
T 3lrv_A 165 -------------------------------------------------------------------------------- 164 (343)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee-ecc-
Q psy10063 721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT-AGF- 798 (894)
Q Consensus 721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~-~~~- 798 (894)
....|...+.+++|+|++.+||+|+.||.|+|||++.++.+ ..+
T Consensus 165 ----------------------------------~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~ 210 (343)
T 3lrv_A 165 ----------------------------------HSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP 210 (343)
T ss_dssp ----------------------------------ECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC
T ss_pred ----------------------------------EecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe
Confidence 00112334779999999999999999999999999988765 333
Q ss_pred ---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC---CCCCee--EEEEeeCCcEEEEecC-CCcE
Q psy10063 799 ---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG---HFGPIN--SLAFHPDGKSYASGGE-DGFV 869 (894)
Q Consensus 799 ---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g---H~~~V~--~l~fSpdg~~LaS~s~-Dg~V 869 (894)
...+..++|+++|.+|++++.+ .|+|||++.++++..+.. |...+. +++|+|+|++|++++. |+.|
T Consensus 211 ~~h~~~v~~l~fs~~g~~l~s~~~~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i 285 (343)
T 3lrv_A 211 VDEEAKIKEVKFADNGYWMVVECDQ-----TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSL 285 (343)
T ss_dssp CCTTSCEEEEEECTTSSEEEEEESS-----BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEE
T ss_pred ccCCCCEEEEEEeCCCCEEEEEeCC-----eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcE
Confidence 3445578899999999999844 499999999887766554 555555 5999999999999888 9999
Q ss_pred EEEecCcccc
Q psy10063 870 RLHTFDQAYF 879 (894)
Q Consensus 870 ~vWdl~~~~~ 879 (894)
+||+++....
T Consensus 286 ~v~~~~~~~~ 295 (343)
T 3lrv_A 286 TIYKFDKKTK 295 (343)
T ss_dssp EEEEECTTTC
T ss_pred EEEEEccccc
Confidence 9999976543
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=4.9e-25 Score=248.52 Aligned_cols=162 Identities=13% Similarity=0.167 Sum_probs=116.7
Q ss_pred cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE-----EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063 407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE-----SISGHAKEPINDMQFSKDATMFITASHSQAVEPIND 481 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~-----~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~ 481 (894)
.|...+....+++++.+|++|+.|++|+|||+..+++.. .+.+|.+ .|.+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~-------------------------~v~~ 141 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHN-------------------------FVND 141 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSS-------------------------CEEE
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCC-------------------------ceEE
Confidence 455555556666778899999999999999999887543 3567887 4555
Q ss_pred EEEec--------CCCEEEEEECCCCEEEEEcCCCcEE-EEEeCCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccc
Q psy10063 482 MQFSK--------DATMFITASKDHTAKLFTTHDRQLL-KTYTTERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVG 551 (894)
Q Consensus 482 l~~sp--------dg~~L~sgs~Dg~V~iwdl~~~~~~-~~~~~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~ 551 (894)
|+|+| |+++||+|+.|++|+|||++.+.++ ..+.++..|.+++|+|++. +|++++.++.
T Consensus 142 v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~----------- 210 (393)
T 4gq1_A 142 IDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGN----------- 210 (393)
T ss_dssp EEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSE-----------
T ss_pred EEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCE-----------
Confidence 55554 7899999999999999999877655 4556789999999999985 7888999998
Q ss_pred eeeEEEEeccccceE-------------------------EEccCCCCCeEEEEEe-cCCCEEEEEeCCCcEEEEECCCC
Q psy10063 552 KFDARFYHLIFEEEF-------------------------ARIKGHFGPINSLAFH-PDGKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 552 ~~~v~vwd~~~~~~~-------------------------~~l~~h~~~V~~l~~s-pdg~~l~sgs~Dg~I~vwdl~~~ 605 (894)
|++||++.++.. ....+|...|.+++|+ +||++|++++.|+.+++||+..+
T Consensus 211 ---v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 211 ---IRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp ---EEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred ---EEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 555555444322 1234788899999997 79999999999999999999876
Q ss_pred cc
Q psy10063 606 LD 607 (894)
Q Consensus 606 ~~ 607 (894)
+.
T Consensus 288 ~~ 289 (393)
T 4gq1_A 288 ND 289 (393)
T ss_dssp --
T ss_pred CC
Confidence 53
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=5.6e-25 Score=249.89 Aligned_cols=300 Identities=14% Similarity=0.072 Sum_probs=212.1
Q ss_pred CCCCEEEEEEccCCC-EEEEec----CCC----cEEEEec--CCCeEE--EEecCCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063 408 QSAKITSLLWGNLDQ-YIITGH----AKG----DICTWDL--RMGREL--ESISGHAKEPINDMQFSKDATMFITASHSQ 474 (894)
Q Consensus 408 H~~~V~~l~~spdg~-~L~sgs----~Dg----~I~iWd~--~tg~~~--~~l~~h~~~~V~~v~~spdg~~la~~~~d~ 474 (894)
+...|...+|.+.|. +|++|+ .|| .|+|||+ .+++++ ..+.+|.. .+..+++++....+.
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~------ 133 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQ-WLRYAGHTASDEVFE------ 133 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGG-GHHHHHHHHHHHHHH------
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChh-HHHHHHHHHHHHHHH------
Confidence 345778888988876 555765 467 8999999 999887 45778876 444444432100000
Q ss_pred CccceEEEEEecCCCEEEEEECC------CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccC
Q psy10063 475 AVEPINDMQFSKDATMFITASKD------HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTST 548 (894)
Q Consensus 475 ~i~~V~~l~~spdg~~L~sgs~D------g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~ 548 (894)
.... ...+.+.+|+.++.+ +.|++||+..+.+.....+...+.+++|+|||++|++++.++.
T Consensus 134 ---~~~g-~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~-------- 201 (415)
T 2hqs_A 134 ---KLTG-IKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESG-------- 201 (415)
T ss_dssp ---HHHS-SCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTS--------
T ss_pred ---HHcC-CCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCC--------
Confidence 0000 000125556665544 7899999986555555557789999999999999999997752
Q ss_pred ccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEE-EEeCCCc--EEEEECCCCccccCCCceeeeEECcCCcE
Q psy10063 549 KVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYA-SGGEDGF--LISNTLSNGLDISEGSFTSSSTQQPDGLV 625 (894)
Q Consensus 549 ~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~-sgs~Dg~--I~vwdl~~~~~~~~~~~v~~~~~spdg~~ 625 (894)
...|++||+..++.. .+..|...+.+++|+|||++|+ +++.|+. |++||++.++..
T Consensus 202 ---~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~----------------- 260 (415)
T 2hqs_A 202 ---RSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR----------------- 260 (415)
T ss_dssp ---SCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-----------------
T ss_pred ---CcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-----------------
Confidence 113899999988775 5667888999999999999888 6666655 888887543200
Q ss_pred EEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeE
Q psy10063 626 YPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEM 705 (894)
Q Consensus 626 l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~ 705 (894)
T Consensus 261 -------------------------------------------------------------------------------- 260 (415)
T 2hqs_A 261 -------------------------------------------------------------------------------- 260 (415)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecC-CC--
Q psy10063 706 ARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALA-DK-- 782 (894)
Q Consensus 706 ~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~-Dg-- 782 (894)
.+..|...+.+++|+|||++|++++. ++
T Consensus 261 -------------------------------------------------~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~ 291 (415)
T 2hqs_A 261 -------------------------------------------------QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRP 291 (415)
T ss_dssp -------------------------------------------------ECCCCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred -------------------------------------------------eCcCCCCcccceEECCCCCEEEEEECCCCCc
Confidence 11123445778999999999998776 45
Q ss_pred cEEEEEccCCceeec--cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEE
Q psy10063 783 VSERYRDRKNKATAG--FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY 860 (894)
Q Consensus 783 ~I~iwd~~~~~~~~~--~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~L 860 (894)
.|++||+..++...- .......++|+|||++|++++.+. +...|++||+.++++. .+..|. .+.+++|+|||++|
T Consensus 292 ~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~-g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l 368 (415)
T 2hqs_A 292 QVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMV 368 (415)
T ss_dssp EEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS-SCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEE
T ss_pred EEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcC-CceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEE
Confidence 577778877664321 112234678999999999888753 3447999999988774 566664 89999999999999
Q ss_pred EEecCCC---cEEEEecCcccc
Q psy10063 861 ASGGEDG---FVRLHTFDQAYF 879 (894)
Q Consensus 861 aS~s~Dg---~V~vWdl~~~~~ 879 (894)
++++.|+ .|++|+++++..
T Consensus 369 ~~~s~~~~~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 369 IYSSSQGMGSVLNLVSTDGRFK 390 (415)
T ss_dssp EEEEEETTEEEEEEEETTSCCE
T ss_pred EEEEcCCCccEEEEEECCCCcE
Confidence 9988887 799999986543
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=1.3e-24 Score=232.94 Aligned_cols=189 Identities=14% Similarity=0.056 Sum_probs=144.0
Q ss_pred CCCEEEEEEccC----CCEEEEecCCCcEEEEecCCCeEEEE-ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063 409 SAKITSLLWGNL----DQYIITGHAKGDICTWDLRMGRELES-ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ 483 (894)
Q Consensus 409 ~~~V~~l~~spd----g~~L~sgs~Dg~I~iWd~~tg~~~~~-l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~ 483 (894)
...|.+|+|+|| ++++++++.+ ++||++..|+.+.. +.+|.+ .|..++|+|+|+.++...... ..+..++
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~-~V~~~~~s~dG~~~~s~~~~~--~~v~~l~ 185 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQ-QVEVMTFAEDGGGKENQFLMP--PEETILT 185 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTC-EEEEEEECTTSCEEEEEEECC--CSSCEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCC-cEEEEEECCCCceeeeeccCC--CceeeEE
Confidence 347788888899 8899998854 89999999999888 578888 999999999999888644322 2577788
Q ss_pred Eec---CCCEEEEEECCCCEEEEEcCCCcEEEEEeC-C---CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063 484 FSK---DATMFITASKDHTAKLFTTHDRQLLKTYTT-E---RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR 556 (894)
Q Consensus 484 ~sp---dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~---~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~ 556 (894)
|++ ++.+|++++.|++|+|||+++|++++.+.. + ..+.+++|+|+|+++++++.+.. +|.+........|+
T Consensus 186 fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w~laSGs~D~tIk 263 (356)
T 2w18_A 186 FAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KESESLRSPVFQLI 263 (356)
T ss_dssp EEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC--------------CCEEEE
T ss_pred eeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cceeeccCCCcEEE
Confidence 888 789999999999999999999999999974 2 35778899999999988775433 35555555556699
Q ss_pred EEeccccceEEEc-----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063 557 FYHLIFEEEFARI-----KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 557 vwd~~~~~~~~~l-----~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
+||..+++.+..+ .+|...+.+..++ +.++++++.|+.|+|||+..++
T Consensus 264 lWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk 316 (356)
T 2w18_A 264 VINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQ 316 (356)
T ss_dssp EEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCS
T ss_pred EEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCc
Confidence 9999999988765 4777766555554 8899999999999999997654
No 129
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=8.3e-24 Score=268.48 Aligned_cols=396 Identities=12% Similarity=0.032 Sum_probs=262.0
Q ss_pred CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC----C--Cc-----
Q psy10063 408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHS----Q--AV----- 476 (894)
Q Consensus 408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d----~--~i----- 476 (894)
|.+.+.+++||+ ++|++++. +.|++|++..++ .+.+..|.. .|.+++|||||++||+++.+ + .+
T Consensus 13 ~~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~gg~-~~~lt~~~~-~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~ 87 (1045)
T 1k32_A 13 MPNLLLNPDIHG--DRIIFVCC-DDLWEHDLKSGS-TRKIVSNLG-VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNG 87 (1045)
T ss_dssp CCCCCEEEEEET--TEEEEEET-TEEEEEETTTCC-EEEEECSSS-EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEET
T ss_pred ccceEeCcEEeC--CEEEEEEC-CcEEEEECCCCc-EEEeeeCCC-cccCeEECCCCCEEEEEEeeccCCCCCeEEEEEC
Confidence 567899999995 57888765 689999998776 456677887 89999999999999988654 2 12
Q ss_pred ------------cce-------EEEEEecCCCEEEEEECC------CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCE
Q psy10063 477 ------------EPI-------NDMQFSKDATMFITASKD------HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPH 531 (894)
Q Consensus 477 ------------~~V-------~~l~~spdg~~L~sgs~D------g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~ 531 (894)
..+ .+++|+|||++|++++.+ ..|++||+..+++.....+ ....++|+| | +
T Consensus 88 ~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~--~~~~~~~sp-G-~ 163 (1045)
T 1k32_A 88 ENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLG--PATHILFAD-G-R 163 (1045)
T ss_dssp TTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSC--SCSEEEEET-T-E
T ss_pred CCCCeEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCC--CcceeeeCC-C-E
Confidence 245 889999999977777654 3588888887776543333 345678999 8 7
Q ss_pred EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC--Cc--c
Q psy10063 532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN--GL--D 607 (894)
Q Consensus 532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~--~~--~ 607 (894)
+++++.+.....|........ .++|....+.....+.+|...+.+++|+++ +++++++.|+.++||.++. +. .
T Consensus 164 l~~~~~~~~~~~~~~~~g~~~--~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~ 240 (1045)
T 1k32_A 164 RVIGRNTFELPHWKGYRGGTR--GKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRK 240 (1045)
T ss_dssp EEEEESCSCCTTSTTCCSTTC--CEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEE
T ss_pred EEEeccCCCccccccccCCCc--CCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceE
Confidence 777764433222222111111 445543333555666899999999999988 6777788889999997653 22 2
Q ss_pred ccCCCceeeeEECcCCcEE-EecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEe
Q psy10063 608 ISEGSFTSSSTQQPDGLVY-PSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHV 686 (894)
Q Consensus 608 ~~~~~~v~~~~~spdg~~l-~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~ 686 (894)
+.....+...+|+|+|..+ ...++.+..|.. ....+.. +....
T Consensus 241 l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~------~~~~l~~-------------------------l~~~~----- 284 (1045)
T 1k32_A 241 HTSFTDYYPRHLNTDGRRILFSKGGSIYIFNP------DTEKIEK-------------------------IEIGD----- 284 (1045)
T ss_dssp CCCCCSSCEEEEEESSSCEEEEETTEEEEECT------TTCCEEE-------------------------CCCCC-----
T ss_pred ecCCCCcceeeEcCCCCEEEEEeCCEEEEecC------CceEeee-------------------------eccCc-----
Confidence 2222334556788888754 333333333332 0000000 00000
Q ss_pred eccCCcceeEeccCcceeEEeeeEEEc-CCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCC-ceE
Q psy10063 687 NPFDEQQSVELTKDEQIEMARNRMSIN-HSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVD-IGF 764 (894)
Q Consensus 687 ~~~~~~~~~~~s~~~~~~~~~~~~~~s-~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~-~v~ 764 (894)
......... .......+.++ ++|+.+++.. ...+.+|....+. ...+..|.. .+.
T Consensus 285 ---~~~~~~~~~----~~~~v~~~~~S~pdG~~la~~~--------~~~i~~~~~~~~~--------~~~~~~~~~~~~~ 341 (1045)
T 1k32_A 285 ---LESPEDRII----SIPSKFAEDFSPLDGDLIAFVS--------RGQAFIQDVSGTY--------VLKVPEPLRIRYV 341 (1045)
T ss_dssp ---CCBCCSEEE----ECGGGGEEEEEECGGGCEEEEE--------TTEEEEECTTSSB--------EEECSCCSCEEEE
T ss_pred ---ccccccccc----cccccceeeecCCCCCEEEEEE--------cCEEEEEcCCCCc--------eEEccCCCcceEE
Confidence 000000000 00012346677 7777776644 1224444332222 223445666 789
Q ss_pred EEeeCCCCCEEEEecCCCcEE-EEEccCCceee--ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec
Q psy10063 765 KMPEPPKREKLALALADKVSE-RYRDRKNKATA--GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI 841 (894)
Q Consensus 765 ~la~spdg~~Latgs~Dg~I~-iwd~~~~~~~~--~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l 841 (894)
+++|+ ||+.|+.++.+..|. +|++..++... .+...+..++|+|||++|++++.++ .|++||+.++++...+
T Consensus 342 ~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~----~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 342 RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRF----EIMTVDLETGKPTVIE 416 (1045)
T ss_dssp EECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTS----EEEEEETTTCCEEEEE
T ss_pred eeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCC----eEEEEECCCCceEEec
Confidence 99999 999999988888888 89987765432 2223345788999999999988776 6999999999988888
Q ss_pred cCCCCCeeEEEEeeCCcEEEEecCCC----------cEEEEecCcccc
Q psy10063 842 KGHFGPINSLAFHPDGKSYASGGEDG----------FVRLHTFDQAYF 879 (894)
Q Consensus 842 ~gH~~~V~~l~fSpdg~~LaS~s~Dg----------~V~vWdl~~~~~ 879 (894)
.+|.+.|.+++|||||++|++++.++ .|+||++..++.
T Consensus 417 ~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 417 RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred cCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 89999999999999999999887654 899999987763
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=3.2e-24 Score=262.32 Aligned_cols=340 Identities=11% Similarity=0.063 Sum_probs=218.4
Q ss_pred CCCEEEEEEccCCCEEEEecC-CC-----cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC-------
Q psy10063 409 SAKITSLLWGNLDQYIITGHA-KG-----DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQA------- 475 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sgs~-Dg-----~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~------- 475 (894)
...|.+++|||||++|++++. |+ .|++||+.+++....+..+.. . |+|+.|........
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~ 107 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVV-L-------PGTETLSDEEKARRERQRIAA 107 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGT-C---------------------------C
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhc-c-------cccccccchhhhhhhhhhhcc
Confidence 567999999999999999988 88 899999999998877765543 1 22222221110000
Q ss_pred ccceEEEEEecCCCEEEEEECCCCEEEEEcCCC---cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063 476 VEPINDMQFSKDATMFITASKDHTAKLFTTHDR---QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK 552 (894)
Q Consensus 476 i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~---~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~ 552 (894)
...|.+++|+|||++|++++. +.|++||+..+ ++.....+...+.+++|+|||++|++++.+ .
T Consensus 108 ~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~-~------------ 173 (741)
T 2ecf_A 108 MTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGR-N------------ 173 (741)
T ss_dssp CEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETT-E------------
T ss_pred ccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCC-c------------
Confidence 014788999999999999886 99999999988 655544556789999999999999998754 2
Q ss_pred eeEEEEeccccceEEEccCCCCC----------------eEEEEEecCCCEEEEEeCCC---------------------
Q psy10063 553 FDARFYHLIFEEEFARIKGHFGP----------------INSLAFHPDGKSYASGGEDG--------------------- 595 (894)
Q Consensus 553 ~~v~vwd~~~~~~~~~l~~h~~~----------------V~~l~~spdg~~l~sgs~Dg--------------------- 595 (894)
|++||+..++..+....+... +.+++|+|||++|++++.|+
T Consensus 174 --i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~ 251 (741)
T 2ecf_A 174 --LWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ 251 (741)
T ss_dssp --EEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred --EEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence 889999888776655444432 47899999999999887665
Q ss_pred ------------cEEEEECCC-Ccccc------CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccC
Q psy10063 596 ------------FLISNTLSN-GLDIS------EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVD 656 (894)
Q Consensus 596 ------------~I~vwdl~~-~~~~~------~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~ 656 (894)
.|++||+.. ++... ....+..++|
T Consensus 252 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------- 294 (741)
T 2ecf_A 252 RYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW------------------------------------- 294 (741)
T ss_dssp ECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-------------------------------------
T ss_pred ecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-------------------------------------
Confidence 344444443 32110 1112223333
Q ss_pred CCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcce
Q psy10063 657 DSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLM 736 (894)
Q Consensus 657 d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~ 736 (894)
++|+.+++...+.. .....+.
T Consensus 295 ---------------------------------------------------------pDg~~l~~~~~~~~--~~~~~i~ 315 (741)
T 2ecf_A 295 ---------------------------------------------------------RDPQHLSFQRQSRD--QKKLDLV 315 (741)
T ss_dssp ---------------------------------------------------------EETTEEEEEEEETT--SSEEEEE
T ss_pred ---------------------------------------------------------CCCCEEEEEEeccc--CCeEEEE
Confidence 33333333221100 0111233
Q ss_pred eeccccCcccccCCCCcceecCCCC----ceEEEeeCCCCCEEEEecCCCcEEEEEcc-CCceeeccccC---CCce-Ee
Q psy10063 737 TWGHIEGTPFKLDGSDTPILAGPVD----IGFKMPEPPKREKLALALADKVSERYRDR-KNKATAGFLLS---CPDF-LF 807 (894)
Q Consensus 737 ~~~~~~g~~~~~dg~~~~~~~~h~~----~v~~la~spdg~~Latgs~Dg~I~iwd~~-~~~~~~~~~~~---~~~~-~f 807 (894)
+|+...+.. ..++..+.. .+..++|+|||++|++++.|+.++||.+. .++ +..+..+ +..+ .|
T Consensus 316 ~~d~~~g~~-------~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~ 387 (741)
T 2ecf_A 316 EVTLASNQQ-------RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAV 387 (741)
T ss_dssp EEETTTCCE-------EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEE
T ss_pred EEECCCCce-------EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEE
Confidence 332222211 111211211 34578999999999999999988888765 333 3333322 2244 49
Q ss_pred ecCCCeEEEEecCCCCceeEEEeecCC-cceeeeccCCCCCeeEEEEeeCCcEEEEecCC----CcEEEEecCccc
Q psy10063 808 DFDTTREVTTTSTKVGKFDARFYHLIF-EEEFARIKGHFGPINSLAFHPDGKSYASGGED----GFVRLHTFDQAY 878 (894)
Q Consensus 808 S~dg~~l~~as~d~~g~~~I~vwd~~t-g~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~D----g~V~vWdl~~~~ 878 (894)
++||+++++.+.+. +...++||++.. ++.+..|.+ ...+.+++|||||++|+....+ +.+.+|+++.+.
T Consensus 388 s~dg~~l~~~~~~~-~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~ 461 (741)
T 2ecf_A 388 DEKAGLAYFRAGIE-SARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEK 461 (741)
T ss_dssp ETTTTEEEEEECSS-CTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCE
T ss_pred eCCCCEEEEEEeCC-CCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCe
Confidence 99999887666543 222478898864 666666765 6678899999999988875443 468899886553
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=2.4e-23 Score=236.47 Aligned_cols=269 Identities=9% Similarity=0.003 Sum_probs=203.7
Q ss_pred EEEecCCCCEEEEEEcc--------------CCCEEEEecCC------CcEEEEecCCCeEEEEecCCCCCCeeEEEEcC
Q psy10063 403 MQVTDQSAKITSLLWGN--------------LDQYIITGHAK------GDICTWDLRMGRELESISGHAKEPINDMQFSK 462 (894)
Q Consensus 403 ~~l~~H~~~V~~l~~sp--------------dg~~L~sgs~D------g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~sp 462 (894)
..+.+|...|.++++++ .+.+|++++.+ +.|+|||+. ++.++.+.+|..
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~---------- 179 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQ---------- 179 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESS----------
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCC----------
Confidence 56788888888888775 15666666544 799999997 555677777776
Q ss_pred CCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCC---CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEE-CC
Q psy10063 463 DATMFITASHSQAVEPINDMQFSKDATMFITASKDH---TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGG-GQ 538 (894)
Q Consensus 463 dg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg---~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~-~~ 538 (894)
.|.+++|+|||++|++++.++ .|++||++++++.....+...+.+++|+|||++|++.+ .+
T Consensus 180 ---------------~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~ 244 (415)
T 2hqs_A 180 ---------------PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT 244 (415)
T ss_dssp ---------------CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTT
T ss_pred ---------------cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecC
Confidence 677888888888888888775 89999999999887666778899999999999988554 34
Q ss_pred CCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeC-CC--cEEEEECCCCccccCCCcee
Q psy10063 539 EAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE-DG--FLISNTLSNGLDISEGSFTS 615 (894)
Q Consensus 539 ~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~-Dg--~I~vwdl~~~~~~~~~~~v~ 615 (894)
+. ..|++||+..++. ..+..|...+.+++|+|||++|++++. ++ .|++||+..++..
T Consensus 245 g~------------~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~------- 304 (415)
T 2hqs_A 245 GS------------LNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ------- 304 (415)
T ss_dssp SS------------CEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-------
T ss_pred CC------------ceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-------
Confidence 32 1388999988775 567788899999999999999998876 45 4666666432100
Q ss_pred eeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCccee
Q psy10063 616 SSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSV 695 (894)
Q Consensus 616 ~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 695 (894)
T Consensus 305 -------------------------------------------------------------------------------- 304 (415)
T 2hqs_A 305 -------------------------------------------------------------------------------- 304 (415)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEE
Q psy10063 696 ELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKL 775 (894)
Q Consensus 696 ~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~L 775 (894)
.+..+...+.+++|+|||++|
T Consensus 305 -----------------------------------------------------------~l~~~~~~~~~~~~spdG~~l 325 (415)
T 2hqs_A 305 -----------------------------------------------------------RITWEGSQNQDADVSSDGKFM 325 (415)
T ss_dssp -----------------------------------------------------------ECCCSSSEEEEEEECTTSSEE
T ss_pred -----------------------------------------------------------EEecCCCcccCeEECCCCCEE
Confidence 001122346688999999999
Q ss_pred EEecCC---CcEEEEEccCCceeeccc-cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEE
Q psy10063 776 ALALAD---KVSERYRDRKNKATAGFL-LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSL 851 (894)
Q Consensus 776 atgs~D---g~I~iwd~~~~~~~~~~~-~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l 851 (894)
++++.+ ..|++||+..++...-.. .....++|+|||++|++++.++. ...|++||+. ++.+..+.+|.+.|.++
T Consensus 326 ~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~~~-~~~l~~~d~~-g~~~~~l~~~~~~v~~~ 403 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGM-GSVLNLVSTD-GRFKARLPATDGQVKFP 403 (415)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETT-EEEEEEEETT-SCCEEECCCSSSEEEEE
T ss_pred EEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcCCC-ccEEEEEECC-CCcEEEeeCCCCCCcCC
Confidence 988765 579999998876632111 24557789999999998887652 3359999997 66678899999999999
Q ss_pred EEeeCCc
Q psy10063 852 AFHPDGK 858 (894)
Q Consensus 852 ~fSpdg~ 858 (894)
+|+|.-.
T Consensus 404 ~~~~~~~ 410 (415)
T 2hqs_A 404 AWSPYLH 410 (415)
T ss_dssp EECCCCC
T ss_pred ccccccc
Confidence 9998653
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=2.1e-22 Score=220.50 Aligned_cols=287 Identities=10% Similarity=0.071 Sum_probs=200.9
Q ss_pred EEEccCCCE-EEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063 415 LLWGNLDQY-IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT 493 (894)
Q Consensus 415 l~~spdg~~-L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s 493 (894)
+.|.+++++ +++++.++.|++||+.+++.+..+..+.. .+ +++|+|+|++|++
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-------------------------~~-~~~~s~dg~~l~~ 56 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYD-------------------------FV-DTAITSDCSNVVV 56 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCC-------------------------EE-EEEECSSSCEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCC-------------------------cc-eEEEcCCCCEEEE
Confidence 456666554 66778899999999999999888776554 45 7888888886666
Q ss_pred EEC-CCCEEEEEcCCCcE-EEEEeCCCCeeE-EEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc
Q psy10063 494 ASK-DHTAKLFTTHDRQL-LKTYTTERPVNS-AALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK 570 (894)
Q Consensus 494 gs~-Dg~V~iwdl~~~~~-~~~~~~~~~v~~-l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~ 570 (894)
++. ++.|++||+.++++ ...+..+..... ++|+|+|++|+++..++. ...|++||+..++.+..+.
T Consensus 57 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-----------~~~i~v~d~~~~~~~~~~~ 125 (331)
T 3u4y_A 57 TSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNH-----------PFNMQSYSFLKNKFISTIP 125 (331)
T ss_dssp EESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSS-----------SCEEEEEETTTTEEEEEEE
T ss_pred EeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCC-----------cccEEEEECCCCCeEEEEE
Confidence 655 88999999999987 777766555555 999999999995444421 0018999999998888776
Q ss_pred CCCCCeEEEEEecCCCEEEEE-eCCCc-EEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCe
Q psy10063 571 GHFGPINSLAFHPDGKSYASG-GEDGF-LISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGG 648 (894)
Q Consensus 571 ~h~~~V~~l~~spdg~~l~sg-s~Dg~-I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~ 648 (894)
.+ ..+.+++|+|||++|+++ ..++. |++|+++.... +. ....
T Consensus 126 ~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~-----------------~~--------~~~~---------- 169 (331)
T 3u4y_A 126 IP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGV-----------------LF--------DTGQ---------- 169 (331)
T ss_dssp CC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCC-----------------EE--------EEEE----------
T ss_pred CC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCc-----------------Ee--------ecCC----------
Confidence 54 456899999999865554 55688 99999863210 00 0000
Q ss_pred eeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccc
Q psy10063 649 VFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQ 728 (894)
Q Consensus 649 i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~ 728 (894)
T Consensus 170 -------------------------------------------------------------------------------- 169 (331)
T 3u4y_A 170 -------------------------------------------------------------------------------- 169 (331)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEE-ecCCCcEEEEEccCCce---eeccc--cCC
Q psy10063 729 SVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLAL-ALADKVSERYRDRKNKA---TAGFL--LSC 802 (894)
Q Consensus 729 ~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Lat-gs~Dg~I~iwd~~~~~~---~~~~~--~~~ 802 (894)
..+ .+.....+++|+|+|++|++ +..++.|++||+..++. +..+. ...
T Consensus 170 -------------------------~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~ 223 (331)
T 3u4y_A 170 -------------------------EFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLP 223 (331)
T ss_dssp -------------------------EEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCC
T ss_pred -------------------------ccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCC
Confidence 000 01122468899999996654 55688999999988776 44443 334
Q ss_pred CceEeecCCCeEEEEecCCCCceeEEEeecCCcce--eeeccCC----CCC---eeEEEEeeCCcEEEE-ecCCCcEEEE
Q psy10063 803 PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE--FARIKGH----FGP---INSLAFHPDGKSYAS-GGEDGFVRLH 872 (894)
Q Consensus 803 ~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~--l~~l~gH----~~~---V~~l~fSpdg~~LaS-~s~Dg~V~vW 872 (894)
..++|+|||++++++..... .|.+||++++++ +..+..+ ... +.+++|+|||++|+. +..++.|+||
T Consensus 224 ~~~~~spdg~~l~v~~~~~~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 300 (331)
T 3u4y_A 224 GTIVVSRDGSTVYVLTESTV---DVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVF 300 (331)
T ss_dssp CCEEECTTSSEEEEECSSEE---EEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEE
T ss_pred ceEEECCCCCEEEEEEcCCC---EEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEE
Confidence 57899999998887765332 599999998877 3333222 222 355899999998865 5556799999
Q ss_pred ecCcccccccc
Q psy10063 873 TFDQAYFDYTF 883 (894)
Q Consensus 873 dl~~~~~~~~~ 883 (894)
++.........
T Consensus 301 d~~~~~~~~~~ 311 (331)
T 3u4y_A 301 TISGKVVGYVA 311 (331)
T ss_dssp ETTSCEEEECT
T ss_pred EecCCccccee
Confidence 99887654443
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=8.4e-22 Score=231.02 Aligned_cols=337 Identities=11% Similarity=0.033 Sum_probs=221.5
Q ss_pred eeccCccEEEecCCC-----------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEec--CCCeEEEEecCCC
Q psy10063 385 SMSPAARKLATNAEP-----------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDL--RMGRELESISGHA 451 (894)
Q Consensus 385 ~~s~dg~~l~~~~~~-----------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~--~tg~~~~~l~~h~ 451 (894)
.+++++++++....+ .+...+..+.. +.+++|+|||++|++++.|+.|++||+ .+++++..+..+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~ 222 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI 222 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCC
Confidence 466777666654332 22234442222 899999999999999999999999999 8899888887543
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec----CCCEEEEEEC-CCCEEEEEcCCCcEEEEEeCC---------
Q psy10063 452 KEPINDMQFSKDATMFITASHSQAVEPINDMQFSK----DATMFITASK-DHTAKLFTTHDRQLLKTYTTE--------- 517 (894)
Q Consensus 452 ~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp----dg~~L~sgs~-Dg~V~iwdl~~~~~~~~~~~~--------- 517 (894)
.+..|+|+| ||++|++++. ++.|.|||..++++++.+...
T Consensus 223 --------------------------~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~ 276 (543)
T 1nir_A 223 --------------------------EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTY 276 (543)
T ss_dssp --------------------------EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCE
T ss_pred --------------------------CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCcccc
Confidence 477888888 8998888874 899999999999999888642
Q ss_pred ---CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEE--EccCCCCCeEEEEEecCCCEEEEEe
Q psy10063 518 ---RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA--RIKGHFGPINSLAFHPDGKSYASGG 592 (894)
Q Consensus 518 ---~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~--~l~~h~~~V~~l~~spdg~~l~sgs 592 (894)
..+.++.|+++++.+++...+... |.+||+..++.+. .+ .+...+.+++|+|+|++|++++
T Consensus 277 ~~~~~v~~i~~s~~~~~~~vs~~~~g~-------------i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~ 342 (543)
T 1nir_A 277 HPEPRVAAIIASHEHPEFIVNVKETGK-------------VLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAA 342 (543)
T ss_dssp ESCCCEEEEEECSSSSEEEEEETTTTE-------------EEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEE
T ss_pred ccCCceEEEEECCCCCEEEEEECCCCe-------------EEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEe
Confidence 268899999998887776655432 8888887765443 33 3566788999999999876554
Q ss_pred -CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHh
Q psy10063 593 -EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMA 671 (894)
Q Consensus 593 -~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~ 671 (894)
.++.|++||+++++.+... . .+.. .+.+....+. .++...++..+...+..|.+|+..
T Consensus 343 ~~~~~v~v~D~~tg~l~~~i------~---~g~~--ph~g~g~~~~-----~p~~g~~~~s~~~~d~~V~v~d~~----- 401 (543)
T 1nir_A 343 NNSNKVAVIDSKDRRLSALV------D---VGKT--PHPGRGANFV-----HPKYGPVWSTSHLGDGSISLIGTD----- 401 (543)
T ss_dssp GGGTEEEEEETTTTEEEEEE------E---CSSS--BCCTTCEEEE-----ETTTEEEEEEEBSSSSEEEEEECC-----
T ss_pred cCCCeEEEEECCCCeEEEee------c---cCCC--CCCCCCcccC-----CCCCccEEEeccCCCceEEEEEeC-----
Confidence 5889999999887533110 0 0000 0000000000 011111111111122333333311
Q ss_pred hhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCC
Q psy10063 672 RNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGS 751 (894)
Q Consensus 672 ~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~ 751 (894)
....-....+
T Consensus 402 ----------------------------------------------------------------------~~~~~~~~~~ 411 (543)
T 1nir_A 402 ----------------------------------------------------------------------PKNHPQYAWK 411 (543)
T ss_dssp ----------------------------------------------------------------------TTTCTTTBTS
T ss_pred ----------------------------------------------------------------------CCCCchhcCe
Confidence 1000000122
Q ss_pred CcceecCCCCceEEEeeCCCCCEEEEec-------CCCcEEEEEccCCceeeccc------------cCCCceEeecCCC
Q psy10063 752 DTPILAGPVDIGFKMPEPPKREKLALAL-------ADKVSERYRDRKNKATAGFL------------LSCPDFLFDFDTT 812 (894)
Q Consensus 752 ~~~~~~~h~~~v~~la~spdg~~Latgs-------~Dg~I~iwd~~~~~~~~~~~------------~~~~~~~fS~dg~ 812 (894)
.+..+.+|...+..|+++|++++|++++ .++.|+|||+.+++...... ..+..+.|++||+
T Consensus 412 ~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~ 491 (543)
T 1nir_A 412 KVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGD 491 (543)
T ss_dssp EEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSS
T ss_pred EEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCC
Confidence 3345666777788899999999999987 37799999999887652221 1223567999999
Q ss_pred eEEEEecCC-CCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcE
Q psy10063 813 REVTTTSTK-VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKS 859 (894)
Q Consensus 813 ~l~~as~d~-~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~ 859 (894)
+++++...+ ..+-.|.|||.++++++..++.+.- +.|+|++
T Consensus 492 ~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~~------~~p~g~~ 533 (543)
T 1nir_A 492 EVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRL------ITPTGKF 533 (543)
T ss_dssp EEEEEEECCTTSCCEEEEEETTTTEEEEEECCTTC------CSEEEEE
T ss_pred EEEEEeecCCCCCCeEEEEECCCceEEEeecCCCc------cCCCeee
Confidence 999885421 1122699999999999999886531 3466654
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=7.5e-22 Score=217.70 Aligned_cols=277 Identities=11% Similarity=0.033 Sum_probs=212.2
Q ss_pred cCCCCEEEEEEccCCCEEEEecC-------CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063 407 DQSAKITSLLWGNLDQYIITGHA-------KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI 479 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sgs~-------Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V 479 (894)
.+...+.+++|+|+|++|++++. ++.|.+||+.+++.+..+.... .+
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--------------------------~~ 91 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--------------------------KP 91 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--------------------------CC
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--------------------------Cc
Confidence 34567899999999998888764 5689999999999888876543 35
Q ss_pred EEEEEecCCCEEEEE-ECCCCEEEEEcCCCcEEEEEeCCC----------CeeEEEEcCCCCEEEEEEC-CCCeEEEecc
Q psy10063 480 NDMQFSKDATMFITA-SKDHTAKLFTTHDRQLLKTYTTER----------PVNSAALSPILPHVVLGGG-QEAREVTTTS 547 (894)
Q Consensus 480 ~~l~~spdg~~L~sg-s~Dg~V~iwdl~~~~~~~~~~~~~----------~v~~l~~spdg~~l~~~~~-~~~~~v~~~~ 547 (894)
.+++|+++|++|+.+ ..++.|.+||+++++.+..+..+. .+.+++|+|+|++|++++. +..
T Consensus 92 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~------- 164 (353)
T 3vgz_A 92 FGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKES------- 164 (353)
T ss_dssp CSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSC-------
T ss_pred ceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCc-------
Confidence 677888888855544 457899999999999988887532 2688999999999888873 222
Q ss_pred CccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEE
Q psy10063 548 TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYP 627 (894)
Q Consensus 548 ~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~ 627 (894)
.|.+||+..++.+..+..+...+.+++|+|+|++|++++.++.|.+||+..++.+.
T Consensus 165 ------~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~------------------ 220 (353)
T 3vgz_A 165 ------VIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILS------------------ 220 (353)
T ss_dssp ------EEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEE------------------
T ss_pred ------eEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEE------------------
Confidence 28899999999988887666678999999999999999999999999986543110
Q ss_pred ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063 628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR 707 (894)
Q Consensus 628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~ 707 (894)
.+..
T Consensus 221 -------~~~~--------------------------------------------------------------------- 224 (353)
T 3vgz_A 221 -------RKKL--------------------------------------------------------------------- 224 (353)
T ss_dssp -------EEEC---------------------------------------------------------------------
T ss_pred -------EEEc---------------------------------------------------------------------
Confidence 0000
Q ss_pred eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecC-CCcEEE
Q psy10063 708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALA-DKVSER 786 (894)
Q Consensus 708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~-Dg~I~i 786 (894)
...++...+..++|+|++++|++++. ++.|++
T Consensus 225 -----------------------------------------------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~ 257 (353)
T 3vgz_A 225 -----------------------------------------------LDDGKEHFFINISLDTARQRAFITDSKAAEVLV 257 (353)
T ss_dssp -----------------------------------------------CCSSSCCCEEEEEEETTTTEEEEEESSSSEEEE
T ss_pred -----------------------------------------------CCCCCCcccceEEECCCCCEEEEEeCCCCEEEE
Confidence 00012334668899999998776655 489999
Q ss_pred EEccCCceeeccccC-CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecC
Q psy10063 787 YRDRKNKATAGFLLS-CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE 865 (894)
Q Consensus 787 wd~~~~~~~~~~~~~-~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~ 865 (894)
||...++.+..+..+ ...++|+++|++++++..... .|++||+.+++.+..+..+. .+.+++|++||++|+.+..
T Consensus 258 ~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~---~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 258 VDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAG---KVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp EETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTT---EEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEE
T ss_pred EECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCC---eEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEc
Confidence 999988876655433 346889999998877764332 69999999999888877554 6789999999997777665
Q ss_pred CC
Q psy10063 866 DG 867 (894)
Q Consensus 866 Dg 867 (894)
++
T Consensus 334 ~~ 335 (353)
T 3vgz_A 334 QK 335 (353)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=1.9e-23 Score=254.66 Aligned_cols=329 Identities=10% Similarity=-0.003 Sum_probs=203.9
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCC--CeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKE--PINDMQFSKDATMFITASHSQAVEPINDMQFSKD 487 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~--~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd 487 (894)
..+.+++|+|||++|++ +.||.|++||+.++++...+..|... .|.+++|||||++|++++.++.+..
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~--------- 86 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQ--------- 86 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSS---------
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCcccee---------
Confidence 34678999999998776 68999999999999988888776531 2455555555554444443322100
Q ss_pred CCEEEEEECCCCEEEEEcCCCcEEEEEeC---CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063 488 ATMFITASKDHTAKLFTTHDRQLLKTYTT---ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE 564 (894)
Q Consensus 488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~---~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~ 564 (894)
.+.++.|++||+.++++...... ...+.+++|||||++|++++. +. |++||+..++
T Consensus 87 ------~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~--------------i~~~~~~~g~ 145 (723)
T 1xfd_A 87 ------HSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NN--------------IYYCAHVGKQ 145 (723)
T ss_dssp ------SCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TE--------------EEEESSSSSC
T ss_pred ------ecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-Ce--------------EEEEECCCCc
Confidence 01247899999999887322222 234889999999999999886 32 8899998888
Q ss_pred eEEEccCCCCCe------------------EEEEEecCCCEEEEEeCC-CcEEEEECCCCccccCCCceeeeEECcCCcE
Q psy10063 565 EFARIKGHFGPI------------------NSLAFHPDGKSYASGGED-GFLISNTLSNGLDISEGSFTSSSTQQPDGLV 625 (894)
Q Consensus 565 ~~~~l~~h~~~V------------------~~l~~spdg~~l~sgs~D-g~I~vwdl~~~~~~~~~~~v~~~~~spdg~~ 625 (894)
..+....+...+ .+++|+|||++|++++.| +.+++|++....... ...+..+.|.++|..
T Consensus 146 ~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~ 224 (723)
T 1xfd_A 146 AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSI-YPTVKPYHYPKAGSE 224 (723)
T ss_dssp CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSS-SCCCEEEECCBTTSC
T ss_pred eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcC-CCcceeccCCCCCCC
Confidence 776665544433 789999999999988765 457777764321100 000111111111100
Q ss_pred EEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeE
Q psy10063 626 YPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEM 705 (894)
Q Consensus 626 l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~ 705 (894)
.....
T Consensus 225 -----------------------------~~~~~---------------------------------------------- 229 (723)
T 1xfd_A 225 -----------------------------NPSIS---------------------------------------------- 229 (723)
T ss_dssp -----------------------------CCEEE----------------------------------------------
T ss_pred -----------------------------CCeeE----------------------------------------------
Confidence 00011
Q ss_pred EeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcc-cccCCCCcceecCCCCceEEEeeCCCCCEEEEecC----
Q psy10063 706 ARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTP-FKLDGSDTPILAGPVDIGFKMPEPPKREKLALALA---- 780 (894)
Q Consensus 706 ~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~-~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~---- 780 (894)
+.+|+...+.. ..+... ..+..+...+..++|+|||++|++...
T Consensus 230 -----------------------------l~~~d~~~~~~~~~l~~~--~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 278 (723)
T 1xfd_A 230 -----------------------------LHVIGLNGPTHDLEMMPP--DDPRMREYYITMVKWATSTKVAVTWLNRAQN 278 (723)
T ss_dssp -----------------------------EEEEESSSSCCCEECCCC--CCGGGSSEEEEEEEESSSSEEEEEEEETTSC
T ss_pred -----------------------------EEEEECCCCceeEEeeCC--ccCCCccceeEEEEEeCCCeEEEEEEcCCCC
Confidence 12221111110 000000 001123556889999999999876643
Q ss_pred CCcEEEEEccCCceeecccc---C-C----CceEeecCCCeEEEEecCCCC----ceeEEEee-cCCcc--eeeeccCCC
Q psy10063 781 DKVSERYRDRKNKATAGFLL---S-C----PDFLFDFDTTREVTTTSTKVG----KFDARFYH-LIFEE--EFARIKGHF 845 (894)
Q Consensus 781 Dg~I~iwd~~~~~~~~~~~~---~-~----~~~~fS~dg~~l~~as~d~~g----~~~I~vwd-~~tg~--~l~~l~gH~ 845 (894)
+..|++||+..++....+.. . + ..++|+|||++|+.++.+..+ ...|++|| ...++ ++..+..+.
T Consensus 279 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~ 358 (723)
T 1xfd_A 279 VSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD 358 (723)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS
T ss_pred eEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC
Confidence 35799999988776432211 1 1 378899999999887443333 34588888 45444 155565444
Q ss_pred CCeeE-EEEeeCCcEEEEecCC---CcEEEEecCc
Q psy10063 846 GPINS-LAFHPDGKSYASGGED---GFVRLHTFDQ 876 (894)
Q Consensus 846 ~~V~~-l~fSpdg~~LaS~s~D---g~V~vWdl~~ 876 (894)
..+.. ++|+|||++|+..+.+ +.++||+++.
T Consensus 359 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 359 WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 44544 7999999999765554 7899999864
No 136
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=1.1e-22 Score=232.07 Aligned_cols=163 Identities=18% Similarity=0.346 Sum_probs=139.8
Q ss_pred EEEecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeE-------EEEecCCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063 403 MQVTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRE-------LESISGHAKEPINDMQFSKDATMFITASHSQ 474 (894)
Q Consensus 403 ~~l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~-------~~~l~~h~~~~V~~v~~spdg~~la~~~~d~ 474 (894)
..+.+|.+.|.+|+|+|+++ +|++|+.||.|+|||+..+.. ...+.+|..
T Consensus 175 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~---------------------- 232 (430)
T 2xyi_A 175 LRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA---------------------- 232 (430)
T ss_dssp EEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSS----------------------
T ss_pred EEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCC----------------------
Confidence 45678999999999999998 999999999999999987432 355566766
Q ss_pred CccceEEEEEec-CCCEEEEEECCCCEEEEEcCCC---cEEEEEe-CCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccC
Q psy10063 475 AVEPINDMQFSK-DATMFITASKDHTAKLFTTHDR---QLLKTYT-TERPVNSAALSPILP-HVVLGGGQEAREVTTTST 548 (894)
Q Consensus 475 ~i~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~---~~~~~~~-~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~ 548 (894)
.|.+++|+| ++.+|++++.||.|+|||++.+ +.+..+. |...|.+++|+|+++ +|++++.++.
T Consensus 233 ---~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~-------- 301 (430)
T 2xyi_A 233 ---VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT-------- 301 (430)
T ss_dssp ---CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSE--------
T ss_pred ---CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCe--------
Confidence 688888888 6789999999999999999987 5666664 568899999999998 5778888886
Q ss_pred ccceeeEEEEeccc-cceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCC
Q psy10063 549 KVGKFDARFYHLIF-EEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSN 604 (894)
Q Consensus 549 ~~~~~~v~vwd~~~-~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~ 604 (894)
|++||++. ++.+..+.+|...|.+|+|+|+++ +|++++.||.|+|||+..
T Consensus 302 ------v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 302 ------VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ------EEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred ------EEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 89999987 567888889999999999999985 699999999999999864
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=4.3e-22 Score=217.74 Aligned_cols=296 Identities=12% Similarity=-0.007 Sum_probs=195.9
Q ss_pred CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEE-EEECCCCE
Q psy10063 422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFI-TASKDHTA 500 (894)
Q Consensus 422 ~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~-sgs~Dg~V 500 (894)
++|++++.++.|++||+.+++.++.+....... .+.+++|+|+|++|+ ++..++.|
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-----------------------~~~~~~~s~dg~~l~v~~~~~~~v 58 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGP-----------------------TPMVPMVAPGGRIAYATVNKSESL 58 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTT-----------------------CCCCEEECTTSSEEEEEETTTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCC-----------------------CccceEEcCCCCEEEEEeCCCCeE
Confidence 478999999999999999999988876433100 156677888887654 44557899
Q ss_pred EEEEcCCCcEEEEEeCCC------CeeEEEEcCCCCEEEEEE------------CCCCeEEEeccCccceeeEEEEeccc
Q psy10063 501 KLFTTHDRQLLKTYTTER------PVNSAALSPILPHVVLGG------------GQEAREVTTTSTKVGKFDARFYHLIF 562 (894)
Q Consensus 501 ~iwdl~~~~~~~~~~~~~------~v~~l~~spdg~~l~~~~------------~~~~~~v~~~~~~~~~~~v~vwd~~~ 562 (894)
++||+.+++.+..+.... .+.+++|+|+|++|+++. .++ .|++||+..
T Consensus 59 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~--------------~i~v~d~~~ 124 (337)
T 1pby_B 59 VKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT--------------RVALYDAET 124 (337)
T ss_dssp EEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCC--------------EEEEEETTT
T ss_pred EEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCc--------------eEEEEECCC
Confidence 999999999988887543 688999999999999886 223 289999998
Q ss_pred cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063 563 EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS 642 (894)
Q Consensus 563 ~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~ 642 (894)
++.+..+.. ...+.+++|+|||++|+++ ++.|++||++.++.+. .+......
T Consensus 125 ~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~-------------------------~~~~~~~~ 176 (337)
T 1pby_B 125 LSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVE-------------------------DKPIQSWE 176 (337)
T ss_dssp TEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEE-------------------------EECSTTTT
T ss_pred CcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEee-------------------------eeeccccC
Confidence 888777754 4467889999999988887 6889999997654210 00000000
Q ss_pred CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEec
Q psy10063 643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN 722 (894)
Q Consensus 643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~ 722 (894)
.. +.++++|..+.+.
T Consensus 177 ---------------~~--------------------------------------------------~~~s~dg~~l~~~ 191 (337)
T 1pby_B 177 ---------------AE--------------------------------------------------TYAQPDVLAVWNQ 191 (337)
T ss_dssp ---------------TT--------------------------------------------------TBCCCBCCCCCCC
T ss_pred ---------------CC--------------------------------------------------ceeCCCccEEeee
Confidence 00 0001111110000
Q ss_pred ccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee----cc
Q psy10063 723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA----GF 798 (894)
Q Consensus 723 ~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~----~~ 798 (894)
..... ... .++.......+.... ......|.+||+..++... ..
T Consensus 192 ~~~~~-------~~~------------------------~~~~~~~~~~~~~~~-~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 192 HESSG-------VMA------------------------TPFYTARKDIDPADP-TAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp CTTTT-------EEE------------------------EEEEEEBTTSCTTSG-GGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred ccCCC-------cee------------------------eeeeccccccccccc-cccccceEEEeCCCCCceEeecCCC
Confidence 00000 000 000000000000000 0111258888888776641 11
Q ss_pred ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063 799 LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY 878 (894)
Q Consensus 799 ~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~ 878 (894)
......++|++||++++++ ++ .|++||+++++.+..+..+ ..+.+++|+|||++|++++.|+.|++|+++.++
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~----~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YN----VLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ES----EEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred CCceeeEEECCCCCEEEEe--CC----eEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 1223358899999999888 32 5999999999888777654 467899999999999999999999999999998
Q ss_pred cccccccC
Q psy10063 879 FDYTFDIS 886 (894)
Q Consensus 879 ~~~~~~~~ 886 (894)
.+..+..+
T Consensus 313 ~~~~~~~~ 320 (337)
T 1pby_B 313 KKGQVDLP 320 (337)
T ss_dssp EEEEEECG
T ss_pred EEEEEEcC
Confidence 88877654
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=2.5e-21 Score=212.28 Aligned_cols=270 Identities=10% Similarity=0.071 Sum_probs=184.8
Q ss_pred EEEEecCCCcEEEEecC-CC--eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECC-C
Q psy10063 423 YIITGHAKGDICTWDLR-MG--RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKD-H 498 (894)
Q Consensus 423 ~L~sgs~Dg~I~iWd~~-tg--~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~D-g 498 (894)
++++++.|+.|++||+. .+ +.+..+. +.. .+.+++|+|+|++|++++.+ +
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~-------------------------~~~~~~~spdg~~l~~~~~~~~ 60 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVD-VPG-------------------------QVQPMVVSPDKRYLYVGVRPEF 60 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSS-------------------------CCCCEEECTTSSEEEEEETTTT
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEe-cCC-------------------------CCceEEECCCCCEEEEeecCCC
Confidence 34444789999999995 34 2233332 333 57788888999988888876 8
Q ss_pred CEEEEEcC--CCc--EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec---cccceEEEccC
Q psy10063 499 TAKLFTTH--DRQ--LLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL---IFEEEFARIKG 571 (894)
Q Consensus 499 ~V~iwdl~--~~~--~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~---~~~~~~~~l~~ 571 (894)
.|++|++. .++ .+..+.....+.+++|+|+|++|++++..+.. |++||+ ..++.+..+..
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-------------i~~~d~~~~~~~~~~~~~~~ 127 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGN-------------VSVTRLEDGLPVGVVDVVEG 127 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTE-------------EEEEEEETTEEEEEEEEECC
T ss_pred eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCe-------------EEEEECCCCccccccccccC
Confidence 99999998 555 34455555689999999999999888764431 778887 44445555544
Q ss_pred CCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeee
Q psy10063 572 HFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVF 650 (894)
Q Consensus 572 h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~ 650 (894)
+ ..+.+++|+|+|++|++++ .++.|++|++.....+ ..+..
T Consensus 128 ~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~-------------------------~~~~~------------ 169 (343)
T 1ri6_A 128 L-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL-------------------------VAQDP------------ 169 (343)
T ss_dssp C-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE-------------------------EEEEE------------
T ss_pred C-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce-------------------------eeecc------------
Confidence 4 4588999999999888877 8899999998641100 00000
Q ss_pred eccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccc
Q psy10063 651 SGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSV 730 (894)
Q Consensus 651 sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~ 730 (894)
. .
T Consensus 170 --~-------~--------------------------------------------------------------------- 171 (343)
T 1ri6_A 170 --A-------E--------------------------------------------------------------------- 171 (343)
T ss_dssp --E-------E---------------------------------------------------------------------
T ss_pred --c-------c---------------------------------------------------------------------
Confidence 0 0
Q ss_pred cCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEe-cCCCcEEEEEccC--Cce--eec---cccC-
Q psy10063 731 DASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALA-LADKVSERYRDRK--NKA--TAG---FLLS- 801 (894)
Q Consensus 731 ~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latg-s~Dg~I~iwd~~~--~~~--~~~---~~~~- 801 (894)
........+.+++|+|++++|+++ ..++.|++|++.. ++. +.. +...
T Consensus 172 ------------------------~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~ 227 (343)
T 1ri6_A 172 ------------------------VTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENF 227 (343)
T ss_dssp ------------------------EECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTC
T ss_pred ------------------------cccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccc
Confidence 000011235578999999977654 5889999999853 322 111 1111
Q ss_pred -----CCceEeecCCCeEEEEecCCCCceeEEEeecC----CcceeeeccCCCCCeeEEEEeeCCcEEEEec-CCCcEEE
Q psy10063 802 -----CPDFLFDFDTTREVTTTSTKVGKFDARFYHLI----FEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFVRL 871 (894)
Q Consensus 802 -----~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~----tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s-~Dg~V~v 871 (894)
...++|+++|++|+++..... .|++||+. ..+.+..+..+.. +.+++|+|||++|++++ .|+.|+|
T Consensus 228 ~~~~~~~~i~~s~dg~~l~v~~~~~~---~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v 303 (343)
T 1ri6_A 228 SDTRWAADIHITPDGRHLYACDRTAS---LITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISV 303 (343)
T ss_dssp CSCCCEEEEEECTTSSEEEEEETTTT---EEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEE
T ss_pred cccCCccceEECCCCCEEEEEecCCC---EEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEE
Confidence 114889999998886653321 69999998 3355555655555 88999999999888877 6899999
Q ss_pred EecC
Q psy10063 872 HTFD 875 (894)
Q Consensus 872 Wdl~ 875 (894)
|+++
T Consensus 304 ~~~d 307 (343)
T 1ri6_A 304 YEIV 307 (343)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9665
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=1.4e-21 Score=238.16 Aligned_cols=199 Identities=8% Similarity=-0.008 Sum_probs=138.4
Q ss_pred eeeeccCccEEEecCCCe----------EEEEEecCCC---CEEEEEEccCCCEEEEecCC---------CcEEEEecCC
Q psy10063 383 LNSMSPAARKLATNAEPV----------VKMQVTDQSA---KITSLLWGNLDQYIITGHAK---------GDICTWDLRM 440 (894)
Q Consensus 383 ~~~~s~dg~~l~~~~~~~----------~~~~l~~H~~---~V~~l~~spdg~~L~sgs~D---------g~I~iWd~~t 440 (894)
.++|+|||++++...++. ....+.+|.. .|.+++|||||++|++++.+ +.|+|||+.+
T Consensus 21 ~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 100 (723)
T 1xfd_A 21 EAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH 100 (723)
T ss_dssp CCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred ccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC
Confidence 346677777555433222 2234555654 49999999999999998764 7788999998
Q ss_pred CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCC
Q psy10063 441 GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERP 519 (894)
Q Consensus 441 g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~ 519 (894)
++. +.+..+.. . ...+.+++|+|||++|++++. +.|++||+..+++.+.... ...
T Consensus 101 ~~~-~~l~~~~~-~---------------------~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~ 156 (723)
T 1xfd_A 101 GDP-QSLDPPEV-S---------------------NAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEG 156 (723)
T ss_dssp CCC-EECCCTTC-C---------------------SCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTT
T ss_pred Cce-EeccCCcc-c---------------------cccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCC
Confidence 876 44432221 0 003677888888888888875 7899999999888776654 232
Q ss_pred e------------------eEEEEcCCCCEEEEEECCC-CeEEEeccC-------------------ccceeeEEEEecc
Q psy10063 520 V------------------NSAALSPILPHVVLGGGQE-AREVTTTST-------------------KVGKFDARFYHLI 561 (894)
Q Consensus 520 v------------------~~l~~spdg~~l~~~~~~~-~~~v~~~~~-------------------~~~~~~v~vwd~~ 561 (894)
+ .+++|+|||++|++++.++ .+.+|.+.. ......|++||+.
T Consensus 157 ~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~ 236 (723)
T 1xfd_A 157 VIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN 236 (723)
T ss_dssp TEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS
T ss_pred ceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC
Confidence 3 7899999999999987653 344444321 1123469999999
Q ss_pred ccceEEEccCC------CCCeEEEEEecCCCEEEEEeC----CCcEEEEECCCC
Q psy10063 562 FEEEFARIKGH------FGPINSLAFHPDGKSYASGGE----DGFLISNTLSNG 605 (894)
Q Consensus 562 ~~~~~~~l~~h------~~~V~~l~~spdg~~l~sgs~----Dg~I~vwdl~~~ 605 (894)
.++....+..+ ...+.+++|+|||++|++... +..|++||+..+
T Consensus 237 ~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 237 GPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp SSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred CCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 88866666654 567899999999998876643 246888887654
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=7.2e-22 Score=210.99 Aligned_cols=257 Identities=12% Similarity=0.034 Sum_probs=186.1
Q ss_pred EecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEc
Q psy10063 426 TGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTT 505 (894)
Q Consensus 426 sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl 505 (894)
.++.|+.|++||+..++... +..|.. .|.+++|+|+|++|++++ ++.|++||+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~~~~-------------------------~v~~~~~spdg~~l~~~~-~~~i~~~d~ 69 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQTPE-------------------------LFEAPNWSPDGKYLLLNS-EGLLYRLSL 69 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEEESS-------------------------CCEEEEECTTSSEEEEEE-TTEEEEEES
T ss_pred CCCcceeEEEEeCCCCceee-eccCCc-------------------------ceEeeEECCCCCEEEEEc-CCeEEEEeC
Confidence 45678999999999888664 444555 678888888888888876 789999999
Q ss_pred CC-CcEEEEEeCC--CCeeEEEEcCCCCEEEEEECC--CCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEE
Q psy10063 506 HD-RQLLKTYTTE--RPVNSAALSPILPHVVLGGGQ--EAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLA 580 (894)
Q Consensus 506 ~~-~~~~~~~~~~--~~v~~l~~spdg~~l~~~~~~--~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~ 580 (894)
.. +++...+... ..+.+++|+|+|++|++++.+ +.. .|.+|++..++ ...+..+. .+.+++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~------------~l~~~~~~~~~-~~~~~~~~-~~~~~~ 135 (297)
T 2ojh_A 70 AGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKS------------AIYLLPSTGGT-PRLMTKNL-PSYWHG 135 (297)
T ss_dssp SSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSC------------EEEEEETTCCC-CEECCSSS-SEEEEE
T ss_pred CCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcc------------eEEEEECCCCc-eEEeecCC-CccceE
Confidence 99 8877766543 678999999999999999843 332 24555555554 34444443 489999
Q ss_pred EecCCCEEE-EEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCc
Q psy10063 581 FHPDGKSYA-SGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSG 659 (894)
Q Consensus 581 ~spdg~~l~-sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~ 659 (894)
|+|||++|+ +++.|+.++||+++.... .
T Consensus 136 ~spdg~~l~~~~~~~~~~~l~~~~~~~~------------------------~--------------------------- 164 (297)
T 2ojh_A 136 WSPDGKSFTYCGIRDQVFDIYSMDIDSG------------------------V--------------------------- 164 (297)
T ss_dssp ECTTSSEEEEEEEETTEEEEEEEETTTC------------------------C---------------------------
T ss_pred ECCCCCEEEEEECCCCceEEEEEECCCC------------------------c---------------------------
Confidence 999999877 677889999997632100 0
Q ss_pred eEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeec
Q psy10063 660 VELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWG 739 (894)
Q Consensus 660 i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~ 739 (894)
T Consensus 165 -------------------------------------------------------------------------------- 164 (297)
T 2ojh_A 165 -------------------------------------------------------------------------------- 164 (297)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEec-CCCcEEEEEcc-CCceeeccc---cCCCceEeecCCCeE
Q psy10063 740 HIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALAL-ADKVSERYRDR-KNKATAGFL---LSCPDFLFDFDTTRE 814 (894)
Q Consensus 740 ~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs-~Dg~I~iwd~~-~~~~~~~~~---~~~~~~~fS~dg~~l 814 (894)
...+..+...+.+++|+|++++|+.++ .++.++||++. ....+..+. ..+..++|+++|++|
T Consensus 165 -------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 231 (297)
T 2ojh_A 165 -------------ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKV 231 (297)
T ss_dssp -------------EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEE
T ss_pred -------------ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEE
Confidence 000112334567899999999888665 58999999876 333333332 233457799999999
Q ss_pred EEEecCCC-------CceeEEEeecCCcce--eeeccCCCCCeeEEEEeeCCcEEEEecCCC
Q psy10063 815 VTTTSTKV-------GKFDARFYHLIFEEE--FARIKGHFGPINSLAFHPDGKSYASGGEDG 867 (894)
Q Consensus 815 ~~as~d~~-------g~~~I~vwd~~tg~~--l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg 867 (894)
++++.+.. +...|++||+..++. +..+.+|...|.+++|+|||++|++++.|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 232 VFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 98887642 223699999998866 444558889999999999999999887664
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=2e-21 Score=236.11 Aligned_cols=338 Identities=11% Similarity=0.044 Sum_probs=210.2
Q ss_pred EEEEEEccCCCEEEEecCCCcEEEEecCCCeEE-EEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCE
Q psy10063 412 ITSLLWGNLDQYIITGHAKGDICTWDLRMGREL-ESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATM 490 (894)
Q Consensus 412 V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~-~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~ 490 (894)
|..+.|+ |+.+++++.|+ | +||+.+|+.+ ..+..+.. +. ..++.+... .......|.+++|+|| ++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~--~~-~~l~~~~~~-----~~~~~~~v~~~~~spd-~~ 94 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAAD--LN-ALMPEGCKF-----QTTDAFPSFRTLDAGR-GL 94 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHH--HH-TTC----------------CCCEEEEETTT-TE
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhH--hh-hhccchhcc-----ccccccCceeEEECCC-Ce
Confidence 5557888 66677777787 8 9999999873 44433321 00 000111000 0000026889999999 66
Q ss_pred EEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-----cce
Q psy10063 491 FITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF-----EEE 565 (894)
Q Consensus 491 L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~-----~~~ 565 (894)
|+.+. ++.|++||+.++++.....+...+.+++|+|||++|+++. ++. |++||+.. ++.
T Consensus 95 ~~~~~-~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~-~~~--------------i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 95 VVLFT-QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVR-NHN--------------LYIARGGKLGEGMSRA 158 (706)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEE-TTE--------------EEEEECBCTTSCCCCC
T ss_pred EEEEE-CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEE-CCe--------------EEEEecCcccccCCCc
Confidence 66553 5999999999998887777778899999999999999864 443 88999888 776
Q ss_pred EEEccCCCCC--------------eEEEEEecCCCEEEEEe---------------------------------CCCcEE
Q psy10063 566 FARIKGHFGP--------------INSLAFHPDGKSYASGG---------------------------------EDGFLI 598 (894)
Q Consensus 566 ~~~l~~h~~~--------------V~~l~~spdg~~l~sgs---------------------------------~Dg~I~ 598 (894)
.+....+... +.+++|+|||++|++++ .+..|+
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 6655444443 48999999999999987 446789
Q ss_pred EEECCCCcccc------CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhh
Q psy10063 599 SNTLSNGLDIS------EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMAR 672 (894)
Q Consensus 599 vwdl~~~~~~~------~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~ 672 (894)
+||++.++... ....+..++|+|||+.++... ... ......|.+|+..
T Consensus 239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~-----~~~---------------~~~~~~v~~~d~~------ 292 (706)
T 2z3z_A 239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE-----VNR---------------AQNECKVNAYDAE------ 292 (706)
T ss_dssp EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE-----ECT---------------TSCEEEEEEEETT------
T ss_pred EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE-----eCC---------------CCCeeEEEEEECC------
Confidence 99988775321 223456777777776552110 000 0001122222211
Q ss_pred hcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccC-cccccCCC
Q psy10063 673 NRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEG-TPFKLDGS 751 (894)
Q Consensus 673 ~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g-~~~~~dg~ 751 (894)
.+ ....+..
T Consensus 293 ---------------------------------------------------------------------~g~~~~~~~~- 302 (706)
T 2z3z_A 293 ---------------------------------------------------------------------TGRFVRTLFV- 302 (706)
T ss_dssp ---------------------------------------------------------------------TCCEEEEEEE-
T ss_pred ---------------------------------------------------------------------CCceeeEEEE-
Confidence 00 0000000
Q ss_pred CcceecCCCCceEEEeeCC--CCCEEEEecCCCcEEEEEcc-CCceeeccccC---CCc-eEeecCCCeEEEEecCCC-C
Q psy10063 752 DTPILAGPVDIGFKMPEPP--KREKLALALADKVSERYRDR-KNKATAGFLLS---CPD-FLFDFDTTREVTTTSTKV-G 823 (894)
Q Consensus 752 ~~~~~~~h~~~v~~la~sp--dg~~Latgs~Dg~I~iwd~~-~~~~~~~~~~~---~~~-~~fS~dg~~l~~as~d~~-g 823 (894)
.........+.+++|+| ||++|++++.|+.++||++. .++.+..+..+ +.. ++|++||++|++++.+.. .
T Consensus 303 --~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~ 380 (706)
T 2z3z_A 303 --ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPL 380 (706)
T ss_dssp --EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTT
T ss_pred --ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCc
Confidence 00000011234678999 99999999999999999876 45544444332 223 679999999887776532 1
Q ss_pred ceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCC----CcEEEEecCccc
Q psy10063 824 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED----GFVRLHTFDQAY 878 (894)
Q Consensus 824 ~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~D----g~V~vWdl~~~~ 878 (894)
...|++||+.+++ +..+. |...|.+++|||||++|+..+.+ +.|++|++++++
T Consensus 381 ~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 381 ERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred eEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 2368888888766 33443 67789999999999988876443 569999998876
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=2e-21 Score=237.44 Aligned_cols=167 Identities=9% Similarity=0.021 Sum_probs=124.5
Q ss_pred EEEEEEccCCCEEEEecCCCcEEEEecCCCe--EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063 412 ITSLLWGNLDQYIITGHAKGDICTWDLRMGR--ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT 489 (894)
Q Consensus 412 V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~--~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~ 489 (894)
|.+++|||||++|++++. +.|++||+.+++ .+..+..|.. .+.+++|+|||+
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~-------------------------~~~~~~~SPDG~ 164 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEG-------------------------FATDAKLSPKGG 164 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSS-------------------------CEEEEEECTTSS
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCc-------------------------ccccccCCCCCC
Confidence 789999999999999986 899999999873 3445566655 577788888888
Q ss_pred EEEEEECCCCEEEEEcCCCcEEEEEeCCCC-----------------eeEEEEcCCCCEEEEEECCCC-eEEEe------
Q psy10063 490 MFITASKDHTAKLFTTHDRQLLKTYTTERP-----------------VNSAALSPILPHVVLGGGQEA-REVTT------ 545 (894)
Q Consensus 490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~-----------------v~~l~~spdg~~l~~~~~~~~-~~v~~------ 545 (894)
+|++++ ++.|++||+..+++.+....+.. +.+++|+|||++|++++.++. +..|.
T Consensus 165 ~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p 243 (741)
T 2ecf_A 165 FVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYA 243 (741)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECS
T ss_pred EEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCC
Confidence 888877 46899999999887765543322 478999999999999876542 11111
Q ss_pred ---------c---cCccceeeEEEEeccc-cceEEEcc--CCCCCeEEEEEecCCCEEEEEeC-----CCcEEEEECCCC
Q psy10063 546 ---------T---STKVGKFDARFYHLIF-EEEFARIK--GHFGPINSLAFHPDGKSYASGGE-----DGFLISNTLSNG 605 (894)
Q Consensus 546 ---------~---~~~~~~~~v~vwd~~~-~~~~~~l~--~h~~~V~~l~~spdg~~l~sgs~-----Dg~I~vwdl~~~ 605 (894)
+ ........|++||+.. ++...... .|...+.+++| |||++|++++. +..|++||+.++
T Consensus 244 ~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g 322 (741)
T 2ecf_A 244 DRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN 322 (741)
T ss_dssp SCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC
T ss_pred CcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC
Confidence 0 0111233588999988 77665543 47788999999 99999987754 567999999876
Q ss_pred c
Q psy10063 606 L 606 (894)
Q Consensus 606 ~ 606 (894)
+
T Consensus 323 ~ 323 (741)
T 2ecf_A 323 Q 323 (741)
T ss_dssp C
T ss_pred c
Confidence 5
No 143
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.87 E-value=1.9e-20 Score=209.66 Aligned_cols=308 Identities=10% Similarity=-0.048 Sum_probs=200.6
Q ss_pred cCCCeEEEEEecCCCCEEE-----EEEccCCCEEEEecC-CC--cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEE
Q psy10063 396 NAEPVVKMQVTDQSAKITS-----LLWGNLDQYIITGHA-KG--DICTWDLRMGRELESISGHAKEPINDMQFSKDATMF 467 (894)
Q Consensus 396 ~~~~~~~~~l~~H~~~V~~-----l~~spdg~~L~sgs~-Dg--~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~l 467 (894)
.........+..|...+.. ++|||||++|++++. ++ .|.+||+.+++..+...++..
T Consensus 17 ~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~--------------- 81 (388)
T 3pe7_A 17 ASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD--------------- 81 (388)
T ss_dssp TTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB---------------
T ss_pred CCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC---------------
Confidence 3334445567788877777 899999999998877 66 488999999988776666654
Q ss_pred EEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCC-eeEE--EEcCCCCEEEEEECCCCeEE-
Q psy10063 468 ITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERP-VNSA--ALSPILPHVVLGGGQEAREV- 543 (894)
Q Consensus 468 a~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~-v~~l--~~spdg~~l~~~~~~~~~~v- 543 (894)
.+.+++|+|||++|+.++.++.|++||+.+++....+..... +... .++++|++|+....++....
T Consensus 82 ----------~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~ 151 (388)
T 3pe7_A 82 ----------NTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVP 151 (388)
T ss_dssp ----------CSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred ----------CccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccc
Confidence 344667889999999999889999999999998877775433 4333 45899998875432111000
Q ss_pred ---Ee----ccCccceeeEEEEeccccceEEEccCCCCCeEEEEEec-CCCEEEEEeCCC------cEEEEECCCCcccc
Q psy10063 544 ---TT----TSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDG------FLISNTLSNGLDIS 609 (894)
Q Consensus 544 ---~~----~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg------~I~vwdl~~~~~~~ 609 (894)
|. .........|.+||+..++.. .+..+...+..++|+| ||++|+.+..++ .|.+|+++.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-- 228 (388)
T 3pe7_A 152 LTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-- 228 (388)
T ss_dssp CCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC--
T ss_pred ccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce--
Confidence 00 000112235899999988654 4445677899999999 999888877532 344444322110
Q ss_pred CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeecc
Q psy10063 610 EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPF 689 (894)
Q Consensus 610 ~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~ 689 (894)
T Consensus 229 -------------------------------------------------------------------------------- 228 (388)
T 3pe7_A 229 -------------------------------------------------------------------------------- 228 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCC--CceEEEe
Q psy10063 690 DEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPV--DIGFKMP 767 (894)
Q Consensus 690 ~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~--~~v~~la 767 (894)
..+..+. ..+..++
T Consensus 229 ----------------------------------------------------------------~~l~~~~~~~~~~~~~ 244 (388)
T 3pe7_A 229 ----------------------------------------------------------------RKVKTHAEGESCTHEF 244 (388)
T ss_dssp ----------------------------------------------------------------EESCCCCTTEEEEEEE
T ss_pred ----------------------------------------------------------------EEeeeCCCCcccccce
Confidence 0000011 1345678
Q ss_pred eCCCCCEEEEecC-CC----cEEEEEccCCcee--ecccc------CCCceEeecCCCeEEEEecCC-----CCceeEEE
Q psy10063 768 EPPKREKLALALA-DK----VSERYRDRKNKAT--AGFLL------SCPDFLFDFDTTREVTTTSTK-----VGKFDARF 829 (894)
Q Consensus 768 ~spdg~~Latgs~-Dg----~I~iwd~~~~~~~--~~~~~------~~~~~~fS~dg~~l~~as~d~-----~g~~~I~v 829 (894)
|+|||++|+..+. ++ .|++||+..++.. ..+.. .....+|+|||++|++...++ .+...|++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~ 324 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYV 324 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEE
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEE
Confidence 9999988765433 22 3999999887642 22211 134457999999998765331 23346999
Q ss_pred eecCCcceeeeccCCCC-----------CeeEEEEeeCCcEEEEec-CCCcEEEEecCc
Q psy10063 830 YHLIFEEEFARIKGHFG-----------PINSLAFHPDGKSYASGG-EDGFVRLHTFDQ 876 (894)
Q Consensus 830 wd~~tg~~l~~l~gH~~-----------~V~~l~fSpdg~~LaS~s-~Dg~V~vWdl~~ 876 (894)
||+.+++. ..+..|.. .+.+++|+|||++|+.++ .+|...||.++-
T Consensus 325 ~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 325 FNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp EETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred EeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 99998765 44555655 578899999999887655 577777776643
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=2.4e-20 Score=226.72 Aligned_cols=167 Identities=10% Similarity=0.057 Sum_probs=122.6
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT 489 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~ 489 (894)
..|.+++|||| ++|+.+. ++.|+|||+.+++..... .+.. .+.+++|+|||+
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~-~~~~-------------------------~~~~~~~SpdG~ 133 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLF-DTNE-------------------------ETASLDFSPVGD 133 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEE-CCTT-------------------------CCTTCEECTTSS
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEcc-CCcc-------------------------cccCCcCCCCCC
Confidence 56999999999 6655553 589999999988765544 3444 466778888888
Q ss_pred EEEEEECCCCEEEEEcCC-----CcEEEEEeCCCC---------------eeEEEEcCCCCEEEEEECCCC-eEEEecc-
Q psy10063 490 MFITASKDHTAKLFTTHD-----RQLLKTYTTERP---------------VNSAALSPILPHVVLGGGQEA-REVTTTS- 547 (894)
Q Consensus 490 ~L~sgs~Dg~V~iwdl~~-----~~~~~~~~~~~~---------------v~~l~~spdg~~l~~~~~~~~-~~v~~~~- 547 (894)
+|+++ .|+.|++||+.. ++..+....... +.+++|+|||++|++++.+.. +..+...
T Consensus 134 ~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~ 212 (706)
T 2z3z_A 134 RVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVD 212 (706)
T ss_dssp EEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEE
T ss_pred EEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeec
Confidence 88885 679999999998 877765544322 589999999999999873321 1111100
Q ss_pred -----------------CccceeeEEEEeccccceEEEcc--CCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEECC
Q psy10063 548 -----------------TKVGKFDARFYHLIFEEEFARIK--GHFGPINSLAFHPDGKSYASGGEDG-----FLISNTLS 603 (894)
Q Consensus 548 -----------------~~~~~~~v~vwd~~~~~~~~~l~--~h~~~V~~l~~spdg~~l~sgs~Dg-----~I~vwdl~ 603 (894)
.......|++||+..++...... .|...+.+++|+|||++|++++.++ .|++||+.
T Consensus 213 ~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~ 292 (706)
T 2z3z_A 213 YHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAE 292 (706)
T ss_dssp CCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETT
T ss_pred cCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECC
Confidence 01133459999999887655442 4677899999999999999887775 89999998
Q ss_pred CC
Q psy10063 604 NG 605 (894)
Q Consensus 604 ~~ 605 (894)
++
T Consensus 293 ~g 294 (706)
T 2z3z_A 293 TG 294 (706)
T ss_dssp TC
T ss_pred CC
Confidence 76
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=1.6e-19 Score=197.51 Aligned_cols=183 Identities=10% Similarity=0.013 Sum_probs=125.5
Q ss_pred ccCccEEEecC-CCeEEEEEecCCCCEEEEEEccCCCEEEEecC-CCcEEEEecCCCeE-EEEecCCCCCCeeEEEEcCC
Q psy10063 387 SPAARKLATNA-EPVVKMQVTDQSAKITSLLWGNLDQYIITGHA-KGDICTWDLRMGRE-LESISGHAKEPINDMQFSKD 463 (894)
Q Consensus 387 s~dg~~l~~~~-~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~-Dg~I~iWd~~tg~~-~~~l~~h~~~~V~~v~~spd 463 (894)
+.++++.+... ...+...+..+...+ +++|+|||++|++++. ++.|++||+.+++. ...+..+..
T Consensus 17 ~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----------- 84 (331)
T 3u4y_A 17 QHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQS----------- 84 (331)
T ss_dssp GGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSS-----------
T ss_pred cCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCC-----------
Confidence 33444433332 234444455566667 9999999997766655 88999999999887 666665554
Q ss_pred CCEEEEEeCCCCccceEEEEEecCCCEEEEEECCC---CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECC-C
Q psy10063 464 ATMFITASHSQAVEPINDMQFSKDATMFITASKDH---TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQ-E 539 (894)
Q Consensus 464 g~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg---~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~-~ 539 (894)
.+.+++|+|+|++|+++..++ .|++||+..++++..+.....+.+++|+|+|++|++++.+ +
T Consensus 85 --------------~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 150 (331)
T 3u4y_A 85 --------------SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSA 150 (331)
T ss_dssp --------------CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTT
T ss_pred --------------CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCC
Confidence 333478888888888544442 8999999999999998888888999999999977776544 5
Q ss_pred C-eEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCC
Q psy10063 540 A-REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNG 605 (894)
Q Consensus 540 ~-~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~ 605 (894)
. +.+|.++.... +.+.. ...+ .+...+.+++|+|||++|+.++ .++.|++||++.+
T Consensus 151 ~~i~~~~~~~~g~-----~~~~~----~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 208 (331)
T 3u4y_A 151 NTVRRFKIDADGV-----LFDTG----QEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP 208 (331)
T ss_dssp TEEEEEEECTTCC-----EEEEE----EEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST
T ss_pred ceEEEEEECCCCc-----EeecC----Cccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 5 44444432211 11111 1112 3345689999999999665554 6889999998654
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=3.2e-20 Score=204.09 Aligned_cols=309 Identities=11% Similarity=-0.000 Sum_probs=197.5
Q ss_pred EEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEE-
Q psy10063 414 SLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFI- 492 (894)
Q Consensus 414 ~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~- 492 (894)
+++++++++++++++.++.|++||+.+++.++.+..+... .+..++|+|+|++|+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~------------------------~~~~~~~s~dg~~~~v 59 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKF------------------------GPGTAMMAPDNRTAYV 59 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCC------------------------SSCEEEECTTSSEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCC------------------------CCceeEECCCCCEEEE
Confidence 4567888999999999999999999999998888755410 255677788887654
Q ss_pred EEECCCCEEEEEcCCCcEEEEEeCCC-------CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce
Q psy10063 493 TASKDHTAKLFTTHDRQLLKTYTTER-------PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE 565 (894)
Q Consensus 493 sgs~Dg~V~iwdl~~~~~~~~~~~~~-------~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~ 565 (894)
++..++.|++||+.+++.+..+.... .+.+++|+|+|++|++++.+... +........-.|.+||+..++.
T Consensus 60 ~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--~~~~~~~~~~~i~~~d~~~~~~ 137 (349)
T 1jmx_B 60 LNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQR--LNDHYVVKPPRLEVFSTADGLE 137 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEE--CSSCEEECCCEEEEEEGGGGGG
T ss_pred EeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccc--cccccccCCCeEEEEECCCccc
Confidence 44568899999999999988877533 27899999999999998854000 0000000001388999988543
Q ss_pred E---EEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063 566 F---ARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS 642 (894)
Q Consensus 566 ~---~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~ 642 (894)
. ..+. +...+.+++|+|||+ |+.++. .|++||+..++.+. .+......
T Consensus 138 ~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~-------------------------~~~~~~~~ 188 (349)
T 1jmx_B 138 AKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTV-------------------------ALPLRNWN 188 (349)
T ss_dssp BCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEE-------------------------EECSTTCC
T ss_pred cceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceec-------------------------cccccccC
Confidence 3 3333 334688999999999 555543 49999987654221 00000000
Q ss_pred CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEec
Q psy10063 643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN 722 (894)
Q Consensus 643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~ 722 (894)
.+ .. . ....+
T Consensus 189 ~~---~~--~---~~~~~-------------------------------------------------------------- 198 (349)
T 1jmx_B 189 RK---GY--S---APDVL-------------------------------------------------------------- 198 (349)
T ss_dssp CT---TB--C---CCBCC--------------------------------------------------------------
T ss_pred Cc---cc--c---Cccce--------------------------------------------------------------
Confidence 00 00 0 00000
Q ss_pred ccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCC-----------CEEEEecCCCcEEEEEccC
Q psy10063 723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKR-----------EKLALALADKVSERYRDRK 791 (894)
Q Consensus 723 ~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg-----------~~Latgs~Dg~I~iwd~~~ 791 (894)
.+|.. +.....+ ....++++++++ .++.....++.+++|+...
T Consensus 199 -------------~~~~~---------~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (349)
T 1jmx_B 199 -------------YFWPH---------QSPRHEF----SMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD 252 (349)
T ss_dssp -------------CCCCC---------CCTTCEE----EEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEE
T ss_pred -------------eeecC---------CCcceeE----EeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccccc
Confidence 00000 0000000 011223333332 2333455566777776532
Q ss_pred CceeeccccCCCceEeec-CCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEE
Q psy10063 792 NKATAGFLLSCPDFLFDF-DTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVR 870 (894)
Q Consensus 792 ~~~~~~~~~~~~~~~fS~-dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~ 870 (894)
.......++|++ ||++++++ ++ .|++||+++++.+..+..+ ..+.+++|++||++|++++.|+.|+
T Consensus 253 ------~~~~~~~~~~sp~dg~~l~~~--~~----~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~ 319 (349)
T 1jmx_B 253 ------LTELYFTGLRSPKDPNQIYGV--LN----RLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLA 319 (349)
T ss_dssp ------CSSCEEEEEECSSCTTEEEEE--ES----EEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEE
T ss_pred ------CCCcceeeEecCCCCCEEEEE--cC----eEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEE
Confidence 222344678999 99999888 32 5999999999988777643 3577999999999999899999999
Q ss_pred EEecCccccccccccC
Q psy10063 871 LHTFDQAYFDYTFDIS 886 (894)
Q Consensus 871 vWdl~~~~~~~~~~~~ 886 (894)
|||++.++.+..+.++
T Consensus 320 v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 320 VFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEETTTTEEEEEEECS
T ss_pred EEeccccceeeeeecC
Confidence 9999999888887765
No 147
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=3.1e-21 Score=235.12 Aligned_cols=319 Identities=12% Similarity=0.053 Sum_probs=200.9
Q ss_pred EEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063 414 SLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT 493 (894)
Q Consensus 414 ~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s 493 (894)
+++|+|||++++++ .|+.|++||+.++++...+.++.. . . ..|.+++|||||++|++
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~-~-------~--------------~~~~~~~~SpDg~~la~ 76 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTM-K-------S--------------VNASNYGLSPDRQFVYL 76 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHH-H-------T--------------TTCSEEEECTTSSEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccc-c-------c--------------cceeeEEECCCCCeEEE
Confidence 67899999766655 589999999999998777765532 0 0 02556666677777666
Q ss_pred EEC---------CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063 494 ASK---------DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE 564 (894)
Q Consensus 494 gs~---------Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~ 564 (894)
++. ++.|++||+.+++++........+.+++|||||++|+++.. +. |++|++..++
T Consensus 77 ~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~-~~--------------i~~~~~~~g~ 141 (719)
T 1z68_A 77 ESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQ-NN--------------IYLKQRPGDP 141 (719)
T ss_dssp EEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEET-TE--------------EEEESSTTSC
T ss_pred EecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEEC-Ce--------------EEEEeCCCCC
Confidence 654 68999999999887321222457889999999999999863 33 8899988877
Q ss_pred eEEEc-cCCCCCe-----------------EEEEEecCCCEEEEEeCC-CcEEEEECCCCccccCCCceeeeEECcCCcE
Q psy10063 565 EFARI-KGHFGPI-----------------NSLAFHPDGKSYASGGED-GFLISNTLSNGLDISEGSFTSSSTQQPDGLV 625 (894)
Q Consensus 565 ~~~~l-~~h~~~V-----------------~~l~~spdg~~l~sgs~D-g~I~vwdl~~~~~~~~~~~v~~~~~spdg~~ 625 (894)
+.+.. .++...| .+++|+|||++|++++.| +.+.+|.+..... ..
T Consensus 142 ~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~-~~--------------- 205 (719)
T 1z68_A 142 PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGD-EQ--------------- 205 (719)
T ss_dssp CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCS-SS---------------
T ss_pred cEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCC-CC---------------
Confidence 65433 2333222 489999999999998765 4555664421110 00
Q ss_pred EEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeE
Q psy10063 626 YPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEM 705 (894)
Q Consensus 626 l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~ 705 (894)
......+.+... |.......+.+|+........
T Consensus 206 ----~~~~~~~~yp~~----------g~~~~~~~l~~~d~~~~~~~~--------------------------------- 238 (719)
T 1z68_A 206 ----YPRTINIPYPKA----------GAKNPVVRIFIIDTTYPAYVG--------------------------------- 238 (719)
T ss_dssp ----SCEEEEEECCBT----------TSCCCEEEEEEEESSCHHHHC---------------------------------
T ss_pred ----CccceeecCCCC----------CCCCCeeEEEEEECCCCCccc---------------------------------
Confidence 001111111000 000011223333322111000
Q ss_pred EeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCC----
Q psy10063 706 ARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALAD---- 781 (894)
Q Consensus 706 ~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~D---- 781 (894)
...+. ....+.+|...+..++|+||++++++....
T Consensus 239 ---------------------------------------~~~~~--~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~ 277 (719)
T 1z68_A 239 ---------------------------------------PQEVP--VPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNV 277 (719)
T ss_dssp ---------------------------------------CEECC--CCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTE
T ss_pred ---------------------------------------eeEcc--CCccCCCCcceEEEeEEeCCCeEEEEEeccccCe
Confidence 00000 001134567778999999998877764332
Q ss_pred CcEEEEE----ccCCceeecc-------ccCCC-----ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCC
Q psy10063 782 KVSERYR----DRKNKATAGF-------LLSCP-----DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF 845 (894)
Q Consensus 782 g~I~iwd----~~~~~~~~~~-------~~~~~-----~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~ 845 (894)
..|++|| +..++..... ...+. .++|++||+.++....+..|...|++||+..++ ...+..+.
T Consensus 278 ~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~ 356 (719)
T 1z68_A 278 SVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGK 356 (719)
T ss_dssp EEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSS
T ss_pred EEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCc
Confidence 2488888 6665543222 12233 678999999988866666666789999998776 45666777
Q ss_pred CCeeEEEEeeCCcEEEEecCC-----CcEEEEecCc
Q psy10063 846 GPINSLAFHPDGKSYASGGED-----GFVRLHTFDQ 876 (894)
Q Consensus 846 ~~V~~l~fSpdg~~LaS~s~D-----g~V~vWdl~~ 876 (894)
..|..+.|+ |+++|+..+.+ +.++||.++.
T Consensus 357 ~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 357 WEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred eEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 778888888 88877766554 8899998763
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=3.8e-19 Score=194.78 Aligned_cols=162 Identities=10% Similarity=0.095 Sum_probs=121.0
Q ss_pred EEEecCCCCEEEEEEccCCCEEEEecCC-CcEEEEecC--CCeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063 403 MQVTDQSAKITSLLWGNLDQYIITGHAK-GDICTWDLR--MGRE--LESISGHAKEPINDMQFSKDATMFITASHSQAVE 477 (894)
Q Consensus 403 ~~l~~H~~~V~~l~~spdg~~L~sgs~D-g~I~iWd~~--tg~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~ 477 (894)
+....|...+.+++|+|+|++|++++.+ +.|++|++. .++. +..+..+.
T Consensus 31 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------------------------- 84 (343)
T 1ri6_A 31 TQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-------------------------- 84 (343)
T ss_dssp EEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS--------------------------
T ss_pred eeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC--------------------------
Confidence 3445688899999999999988888776 899999997 5543 33443322
Q ss_pred ceEEEEEecCCCEEEEEEC-CCCEEEEEcC---CCcEEEEEeCCCCeeEEEEcCCCCEEEEEE-CCCCeEEEeccCccce
Q psy10063 478 PINDMQFSKDATMFITASK-DHTAKLFTTH---DRQLLKTYTTERPVNSAALSPILPHVVLGG-GQEAREVTTTSTKVGK 552 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~-Dg~V~iwdl~---~~~~~~~~~~~~~v~~l~~spdg~~l~~~~-~~~~~~v~~~~~~~~~ 552 (894)
.+.+++|+|+|++|++++. ++.|++||+. .++.+..+.....+.+++|+|+|++|++++ .++.
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~------------ 152 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDR------------ 152 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTE------------
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCE------------
Confidence 4677888888887776665 7889999994 445566666677899999999999999887 5554
Q ss_pred eeEEEEeccc-cceEE----EccC-CCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCC
Q psy10063 553 FDARFYHLIF-EEEFA----RIKG-HFGPINSLAFHPDGKSYASGG-EDGFLISNTLSN 604 (894)
Q Consensus 553 ~~v~vwd~~~-~~~~~----~l~~-h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~ 604 (894)
|++||+.. ++... .+.. ....+.+++|+|+|++|+.++ .++.|++|+++.
T Consensus 153 --v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 153 --ICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp --EEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred --EEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 77888776 54322 2222 334788999999999776555 789999999853
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=1.3e-20 Score=223.85 Aligned_cols=266 Identities=11% Similarity=0.023 Sum_probs=187.0
Q ss_pred CCCEEEEEEccCCCEEEEecC-CCcEEEEecCCCeEEEEecCCC-CCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063 409 SAKITSLLWGNLDQYIITGHA-KGDICTWDLRMGRELESISGHA-KEPINDMQFSKDATMFITASHSQAVEPINDMQFSK 486 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sgs~-Dg~I~iWd~~tg~~~~~l~~h~-~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp 486 (894)
...|.+++|+|||++||+++. ||.++||++..++..+ +..|. . .|.+++|+|
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~-------------------------~~~~~~~sp 74 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPIN-------------------------SVLDPHYGV 74 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCS-------------------------EECEECTTC
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eeccccc-------------------------ccccccCCC
Confidence 567999999999999999887 9999999997666544 44444 4 466667777
Q ss_pred CCCEEEEEEC---CCCEEEEEcCC---CcEEEEEeCCCCeeEEEEcCCCCEEEEE-ECCCCeEEEeccCccceeeEEEEe
Q psy10063 487 DATMFITASK---DHTAKLFTTHD---RQLLKTYTTERPVNSAALSPILPHVVLG-GGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 487 dg~~L~sgs~---Dg~V~iwdl~~---~~~~~~~~~~~~v~~l~~spdg~~l~~~-~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
| ++|++++. +...+||.+.. +... .+.....+..++|+|+|+.++.. +..+. +.+||
T Consensus 75 d-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~--------------~~l~d 138 (582)
T 3o4h_A 75 G-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDR--------------VALYA 138 (582)
T ss_dssp S-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSC--------------EEEEE
T ss_pred C-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCC--------------ceEEE
Confidence 7 55665554 45556655432 3333 44444456678999999754443 33343 55899
Q ss_pred ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC----CcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063 560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED----GFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS 635 (894)
Q Consensus 560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D----g~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~ 635 (894)
+..++.......+. .+++|+|||++|++++.+ +.|++||+++++.
T Consensus 139 ~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~---------------------------- 187 (582)
T 3o4h_A 139 LDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL---------------------------- 187 (582)
T ss_dssp EETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC----------------------------
T ss_pred ccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc----------------------------
Confidence 98887665544333 789999999999988776 6788888765421
Q ss_pred EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063 636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS 715 (894)
Q Consensus 636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~ 715 (894)
T Consensus 188 -------------------------------------------------------------------------------- 187 (582)
T 3o4h_A 188 -------------------------------------------------------------------------------- 187 (582)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCC--cEEEEEccCCc
Q psy10063 716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADK--VSERYRDRKNK 793 (894)
Q Consensus 716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg--~I~iwd~~~~~ 793 (894)
..+..|...+..++|+|||++|+++..++ .|++||+..++
T Consensus 188 --------------------------------------~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 188 --------------------------------------RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp --------------------------------------EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred --------------------------------------eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 01123444567899999999999888888 89999998877
Q ss_pred eeecccc---CCCceE--------eecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEE
Q psy10063 794 ATAGFLL---SCPDFL--------FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYAS 862 (894)
Q Consensus 794 ~~~~~~~---~~~~~~--------fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS 862 (894)
.. .... .+..++ |+|||..++++..++ .++||++ |+++. .+.+.|.+++|+ ||++|++
T Consensus 230 ~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g----~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~ 298 (582)
T 3o4h_A 230 VE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG----RSAVFID--GERVE---APQGNHGRVVLW-RGKLVTS 298 (582)
T ss_dssp EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT----EEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEE
T ss_pred EE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC----cEEEEEE--CCeec---cCCCceEEEEec-CCEEEEE
Confidence 65 2221 122455 999996666666665 6999999 76655 344678999999 9999999
Q ss_pred ecCCC---cEEEEecCc
Q psy10063 863 GGEDG---FVRLHTFDQ 876 (894)
Q Consensus 863 ~s~Dg---~V~vWdl~~ 876 (894)
++.+. .|++|++.+
T Consensus 299 ~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 299 HTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEETTEEEEEEEETTCC
T ss_pred EcCCCCCCeEEEEcCCC
Confidence 88774 467777654
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=3.3e-19 Score=196.68 Aligned_cols=244 Identities=8% Similarity=-0.028 Sum_probs=161.2
Q ss_pred ceEEEEEecCCCEEEEEEC---CCCEEEEEcCCCcE--EEEE-eCCCCeeEEEEcCCCCEEEEEEC-CCCeEEEeccCcc
Q psy10063 478 PINDMQFSKDATMFITASK---DHTAKLFTTHDRQL--LKTY-TTERPVNSAALSPILPHVVLGGG-QEAREVTTTSTKV 550 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~---Dg~V~iwdl~~~~~--~~~~-~~~~~v~~l~~spdg~~l~~~~~-~~~~~v~~~~~~~ 550 (894)
.+..|+|+|||+ |++++. ++.|++||+..++. +..+ .+...+..++|+|+|++|++++. ++.
T Consensus 41 ~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~---------- 109 (347)
T 3hfq_A 41 NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGT---------- 109 (347)
T ss_dssp CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTE----------
T ss_pred CcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCE----------
Confidence 466778888888 554443 68999999987764 3332 24678899999999999999984 454
Q ss_pred ceeeEEEEeccc-c--ceEEEccC---------CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeE
Q psy10063 551 GKFDARFYHLIF-E--EEFARIKG---------HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSST 618 (894)
Q Consensus 551 ~~~~v~vwd~~~-~--~~~~~l~~---------h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~ 618 (894)
|++|++.. + +.+..+.. +...+.+++|+|||+++++...++.|++|+++....+
T Consensus 110 ----v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~---------- 175 (347)
T 3hfq_A 110 ----AEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL---------- 175 (347)
T ss_dssp ----EEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCE----------
T ss_pred ----EEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE----------
Confidence 66666642 2 22222211 2235889999999996666667889999998621100
Q ss_pred ECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEec
Q psy10063 619 QQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELT 698 (894)
Q Consensus 619 ~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s 698 (894)
..+..
T Consensus 176 ---------------~~~~~------------------------------------------------------------ 180 (347)
T 3hfq_A 176 ---------------SEQSV------------------------------------------------------------ 180 (347)
T ss_dssp ---------------EEEEE------------------------------------------------------------
T ss_pred ---------------EEeee------------------------------------------------------------
Confidence 00000
Q ss_pred cCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEE-
Q psy10063 699 KDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLAL- 777 (894)
Q Consensus 699 ~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Lat- 777 (894)
+..........++|+|||++|++
T Consensus 181 --------------------------------------------------------~~~~~g~~p~~~~~spdg~~l~v~ 204 (347)
T 3hfq_A 181 --------------------------------------------------------LTMEAGFGPRHLVFSPDGQYAFLA 204 (347)
T ss_dssp --------------------------------------------------------EECCTTCCEEEEEECTTSSEEEEE
T ss_pred --------------------------------------------------------EEcCCCCCCceEEECCCCCEEEEE
Confidence 00000112456899999996665
Q ss_pred ecCCCcEEEEEccC--Cce--eecc---cc------CCCceEeecCCCeEEEEecCCCCceeEEEeecCC---cceeeec
Q psy10063 778 ALADKVSERYRDRK--NKA--TAGF---LL------SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF---EEEFARI 841 (894)
Q Consensus 778 gs~Dg~I~iwd~~~--~~~--~~~~---~~------~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t---g~~l~~l 841 (894)
+..++.|++|++.. ++. +..+ .. ....++|+|||++|+++..... .|+||++.. .+.+..+
T Consensus 205 ~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~---~v~v~~~~~~g~~~~~~~~ 281 (347)
T 3hfq_A 205 GELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN---TLAVFAVTADGHLTLIQQI 281 (347)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT---EEEEEEECGGGCEEEEEEE
T ss_pred eCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC---EEEEEEECCCCcEEEeEEE
Confidence 56788999999874 332 1111 11 1335889999999876654322 699999973 2556666
Q ss_pred cCCCCCeeEEEEeeCCcEEEEecC-CCcEEEEec--Cccccc
Q psy10063 842 KGHFGPINSLAFHPDGKSYASGGE-DGFVRLHTF--DQAYFD 880 (894)
Q Consensus 842 ~gH~~~V~~l~fSpdg~~LaS~s~-Dg~V~vWdl--~~~~~~ 880 (894)
..|...+.+|+|+|||++|++++. ++.|.||++ +.+++.
T Consensus 282 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 282 STEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp ECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred ecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 677778999999999998888765 489999955 445544
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=6.8e-20 Score=195.55 Aligned_cols=224 Identities=13% Similarity=0.072 Sum_probs=170.8
Q ss_pred cCccEEEecCCCeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC-CeEEEEecCCCCCCeeEEEEcCCCCE
Q psy10063 388 PAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM-GRELESISGHAKEPINDMQFSKDATM 466 (894)
Q Consensus 388 ~dg~~l~~~~~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t-g~~~~~l~~h~~~~V~~v~~spdg~~ 466 (894)
.|+.+.+..........+..|.+.|.+++|+|||++|++++ ++.|++||+.. ++....+..+....|.+++|+|+|++
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 98 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred cceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence 34444444433333345667999999999999999999987 78999999999 88777776665447899999999999
Q ss_pred EEEEeCC--CCc------------------cceEEEEEecCCCEEE-EEECCCCEEEEEc--CCCcEEEEEeCCCCeeEE
Q psy10063 467 FITASHS--QAV------------------EPINDMQFSKDATMFI-TASKDHTAKLFTT--HDRQLLKTYTTERPVNSA 523 (894)
Q Consensus 467 la~~~~d--~~i------------------~~V~~l~~spdg~~L~-sgs~Dg~V~iwdl--~~~~~~~~~~~~~~v~~l 523 (894)
|++++.+ +.. ..+.+++|+|+|++|+ +++.++.++||++ ..++......+...+.++
T Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 178 (297)
T 2ojh_A 99 YAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGP 178 (297)
T ss_dssp EEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEE
T ss_pred EEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccc
Confidence 9999833 222 3578889999999887 6778999999985 455554444556789999
Q ss_pred EEcCCCCEEEEEEC-CCCeEEEeccCccceeeEEEEecc-ccceEEEccCCCCCeEEEEEecCCCEEEEEeCC-------
Q psy10063 524 ALSPILPHVVLGGG-QEAREVTTTSTKVGKFDARFYHLI-FEEEFARIKGHFGPINSLAFHPDGKSYASGGED------- 594 (894)
Q Consensus 524 ~~spdg~~l~~~~~-~~~~~v~~~~~~~~~~~v~vwd~~-~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D------- 594 (894)
+|+|+|++|++++. ++. +++|++. .+..+..+..|...+.+++|+|+|++|++++.+
T Consensus 179 ~~s~dg~~l~~~~~~~~~--------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 179 DYSPDGRWIYFNSSRTGQ--------------MQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp EECTTSSEEEEEECTTSS--------------CEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCC
T ss_pred eECCCCCEEEEEecCCCC--------------ccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCccc
Confidence 99999999988775 554 5666665 455667788888899999999999999888765
Q ss_pred ----CcEEEEECCCCccc------cCCCceeeeEECcCCcEE
Q psy10063 595 ----GFLISNTLSNGLDI------SEGSFTSSSTQQPDGLVY 626 (894)
Q Consensus 595 ----g~I~vwdl~~~~~~------~~~~~v~~~~~spdg~~l 626 (894)
+.|++||++.++.. .....+..++|+|+|..+
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 286 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEF 286 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEE
T ss_pred ccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEE
Confidence 56999999876532 123456667778877655
No 152
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=5.2e-19 Score=194.83 Aligned_cols=246 Identities=11% Similarity=0.037 Sum_probs=188.5
Q ss_pred ceEEEEEecCCCEEEEEEC-------CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc
Q psy10063 478 PINDMQFSKDATMFITASK-------DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKV 550 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~-------Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~ 550 (894)
.+..++|+|+|++|++++. ++.|.+||+.+++.+..+.....+.+++|+++|++|+++.....
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~---------- 111 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNS---------- 111 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTT----------
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCC----------
Confidence 4677888888887777764 56799999999999999988777899999999998888776543
Q ss_pred ceeeEEEEeccccceEEEccCCCCC---------eEEEEEecCCCEEEEEe--CCCcEEEEECCCCccccCCCceeeeEE
Q psy10063 551 GKFDARFYHLIFEEEFARIKGHFGP---------INSLAFHPDGKSYASGG--EDGFLISNTLSNGLDISEGSFTSSSTQ 619 (894)
Q Consensus 551 ~~~~v~vwd~~~~~~~~~l~~h~~~---------V~~l~~spdg~~l~sgs--~Dg~I~vwdl~~~~~~~~~~~v~~~~~ 619 (894)
.|.+||+..++.+..+..+... +.+++|+|+|++|+.++ .++.|.+||++.++.+.
T Consensus 112 ---~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~---------- 178 (353)
T 3vgz_A 112 ---AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT---------- 178 (353)
T ss_dssp ---EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE----------
T ss_pred ---EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE----------
Confidence 2889999999988877665432 78899999999877776 47889999986543110
Q ss_pred CcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEecc
Q psy10063 620 QPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTK 699 (894)
Q Consensus 620 spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~ 699 (894)
.
T Consensus 179 ---------------~---------------------------------------------------------------- 179 (353)
T 3vgz_A 179 ---------------A---------------------------------------------------------------- 179 (353)
T ss_dssp ---------------E----------------------------------------------------------------
T ss_pred ---------------E----------------------------------------------------------------
Confidence 0
Q ss_pred CcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEec
Q psy10063 700 DEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALAL 779 (894)
Q Consensus 700 ~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs 779 (894)
+..+...+.+++|+|++++|++++
T Consensus 180 --------------------------------------------------------~~~~~~~~~~~~~s~dg~~l~~~~ 203 (353)
T 3vgz_A 180 --------------------------------------------------------IQNTGKMSTGLALDSEGKRLYTTN 203 (353)
T ss_dssp --------------------------------------------------------ECCCCTTCCCCEEETTTTEEEEEC
T ss_pred --------------------------------------------------------ecCCCCccceEEECCCCCEEEEEc
Confidence 000111234577889999999999
Q ss_pred CCCcEEEEEccCCceeeccccC-------CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEE
Q psy10063 780 ADKVSERYRDRKNKATAGFLLS-------CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLA 852 (894)
Q Consensus 780 ~Dg~I~iwd~~~~~~~~~~~~~-------~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~ 852 (894)
.++.|.+||...++.+..+... ...++|+++|++++++..... .|++||+.+++.+..+..+.. .+++
T Consensus 204 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~---~v~~~d~~~~~~~~~~~~~~~--~~~~ 278 (353)
T 3vgz_A 204 ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA---EVLVVDTRNGNILAKVAAPES--LAVL 278 (353)
T ss_dssp TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSS---EEEEEETTTCCEEEEEECSSC--CCEE
T ss_pred CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCC---EEEEEECCCCcEEEEEEcCCC--ceEE
Confidence 9999999999988876655431 124789999999888765532 699999999998887775442 5799
Q ss_pred EeeCCcEEE-EecCCCcEEEEecCccccccccccC
Q psy10063 853 FHPDGKSYA-SGGEDGFVRLHTFDQAYFDYTFDIS 886 (894)
Q Consensus 853 fSpdg~~La-S~s~Dg~V~vWdl~~~~~~~~~~~~ 886 (894)
|+|||++|+ +...|+.|.+||+..++.+..+...
T Consensus 279 ~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 313 (353)
T 3vgz_A 279 FNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP 313 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred ECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC
Confidence 999998655 4557999999999988877766543
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=1.5e-20 Score=228.99 Aligned_cols=192 Identities=10% Similarity=0.017 Sum_probs=128.9
Q ss_pred eeeeccCccEEEecCCCeE----------EEEEecCCC---CEEEEEEccCCCEEEEecC---------CCcEEEEecCC
Q psy10063 383 LNSMSPAARKLATNAEPVV----------KMQVTDQSA---KITSLLWGNLDQYIITGHA---------KGDICTWDLRM 440 (894)
Q Consensus 383 ~~~~s~dg~~l~~~~~~~~----------~~~l~~H~~---~V~~l~~spdg~~L~sgs~---------Dg~I~iWd~~t 440 (894)
...|++||++++...+..+ +..+.+|.. .|.+++|||||++|++++. |+.|+|||+.+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 3467777766654433322 223333433 3899999999999998876 78999999999
Q ss_pred CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC--C
Q psy10063 441 GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE--R 518 (894)
Q Consensus 441 g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~--~ 518 (894)
++.+..... .. .+.+++|+|||++|+++. ++.|++||+..+++.+..... .
T Consensus 100 g~~~~~~~l-~~-------------------------~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~ 152 (719)
T 1z68_A 100 GEFVRGNEL-PR-------------------------PIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGREN 152 (719)
T ss_dssp TEECCSSCC-CS-------------------------SBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTT
T ss_pred Cccccceec-Cc-------------------------ccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcC
Confidence 886311110 12 467788888888888875 789999999988876543221 1
Q ss_pred Ce-----------------eEEEEcCCCCEEEEEECCC-CeEEEecc-------------------CccceeeEEEEecc
Q psy10063 519 PV-----------------NSAALSPILPHVVLGGGQE-AREVTTTS-------------------TKVGKFDARFYHLI 561 (894)
Q Consensus 519 ~v-----------------~~l~~spdg~~l~~~~~~~-~~~v~~~~-------------------~~~~~~~v~vwd~~ 561 (894)
.| .+++|||||++|++++.+. .+.+|.+. .......|++||+.
T Consensus 153 ~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~ 232 (719)
T 1z68_A 153 KIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTT 232 (719)
T ss_dssp TEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESS
T ss_pred CeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECC
Confidence 12 4899999999999988653 33333221 01123368999999
Q ss_pred ccceE---E-----EccCCCCCeEEEEEecCCCEEEEEeCCC----cEEEEE
Q psy10063 562 FEEEF---A-----RIKGHFGPINSLAFHPDGKSYASGGEDG----FLISNT 601 (894)
Q Consensus 562 ~~~~~---~-----~l~~h~~~V~~l~~spdg~~l~sgs~Dg----~I~vwd 601 (894)
.++.+ . .+.+|...+.+++|+||++++++....+ .|++||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 233 YPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp CHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred CCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 88753 1 2346888999999999987777644222 366777
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=5.3e-19 Score=193.06 Aligned_cols=271 Identities=11% Similarity=-0.059 Sum_probs=180.4
Q ss_pred CEEEEEEccCCCEE-EEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063 411 KITSLLWGNLDQYI-ITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT 489 (894)
Q Consensus 411 ~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~ 489 (894)
.+.+++|+|||++| ++++.++.|++||+.+++.+..+..... .... ..+.+++|+|+|+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~-------------------~~~~~~~~s~dg~ 94 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP-EERV-------------------KSLFGAALSPDGK 94 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT-TEEE-------------------ECTTCEEECTTSS
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc-cccc-------------------ccccceEECCCCC
Confidence 58899999999866 4566688999999999998877764221 0000 0245667777777
Q ss_pred EEEEEE------------CCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063 490 MFITAS------------KDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF 557 (894)
Q Consensus 490 ~L~sgs------------~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v 557 (894)
+|++++ .++.|++||+.+++.+..+.....+.+++|+|+|++|+++ ++. |++
T Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~--------------i~~ 158 (337)
T 1pby_B 95 TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRD--------------LHV 158 (337)
T ss_dssp EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSS--------------EEE
T ss_pred EEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCe--------------EEE
Confidence 776665 5799999999999999888877788999999999998888 343 889
Q ss_pred EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEE--EEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063 558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLI--SNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS 635 (894)
Q Consensus 558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~--vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~ 635 (894)
||+..++.+..+..+.. ...+.|+|+|++|+..+.++... +|...... .+
T Consensus 159 ~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~---------------~~------------ 210 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKD---------------ID------------ 210 (337)
T ss_dssp EETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTT---------------SC------------
T ss_pred EECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccc---------------cc------------
Confidence 99999988877765431 11337899998776665544432 22110000 00
Q ss_pred EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063 636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS 715 (894)
Q Consensus 636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~ 715 (894)
..... . ....+.+|+
T Consensus 211 -----------~~~~~-~--~~~~v~~~d--------------------------------------------------- 225 (337)
T 1pby_B 211 -----------PADPT-A--YRTGLLTMD--------------------------------------------------- 225 (337)
T ss_dssp -----------TTSGG-G--EEEEEEEEE---------------------------------------------------
T ss_pred -----------ccccc-c--cccceEEEe---------------------------------------------------
Confidence 00000 0 000111111
Q ss_pred CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063 716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT 795 (894)
Q Consensus 716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~ 795 (894)
...+... ...+..+...+.+++|+|++++|+++ ++.|++||+..++.+
T Consensus 226 ------------------------~~~~~~~------~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 226 ------------------------LETGEMA------MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASI 273 (337)
T ss_dssp ------------------------TTTCCEE------EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEE
T ss_pred ------------------------CCCCCce------EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCc
Confidence 0000000 00112233457789999999999988 799999999988776
Q ss_pred eccc--cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCC
Q psy10063 796 AGFL--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG 846 (894)
Q Consensus 796 ~~~~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~ 846 (894)
..+. .....++|++||++++++..++ .|++||+++++.+..+..+.+
T Consensus 274 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~i~v~d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 274 KRVPLPHSYYSVNVSTDGSTVWLGGALG----DLAAYDAETLEKKGQVDLPGN 322 (337)
T ss_dssp EEEECSSCCCEEEECTTSCEEEEESBSS----EEEEEETTTCCEEEEEECGGG
T ss_pred ceecCCCceeeEEECCCCCEEEEEcCCC----cEEEEECcCCcEEEEEEcCCC
Confidence 5543 3456788999999999886554 699999999998888775543
No 155
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=8.2e-19 Score=214.30 Aligned_cols=381 Identities=11% Similarity=-0.006 Sum_probs=214.2
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC
Q psy10063 409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA 488 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg 488 (894)
.....+++|+|||++|+++ |+.|++||+.+|++...+.+|.. .+..+ ...+++|||||
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~-~~~~~-------------------~~~~~~~Spdg 73 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTF-DEFGH-------------------SINDYSISPDG 73 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTT-TTCCS-------------------CCCEEEECTTS
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhh-hhhcc-------------------cccceEECCCC
Confidence 3446689999999999987 89999999999998888887764 11100 12335667777
Q ss_pred CEEEEEECC---------CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063 489 TMFITASKD---------HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 489 ~~L~sgs~D---------g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
++|++++.+ +.+.|||+.++++.....+...+..++|||||++|+.+.. +. |++|+
T Consensus 74 ~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~-~~--------------i~~~~ 138 (740)
T 4a5s_A 74 QFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN-ND--------------IYVKI 138 (740)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEET-TE--------------EEEES
T ss_pred CEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEEC-Ce--------------EEEEE
Confidence 777666654 5678999999987765445678999999999999999864 32 88888
Q ss_pred ccccceEEEc-cCCCCCe-----------------EEEEEecCCCEEEEEeCCCc-EEEEECCCCccc-cCCCceeeeEE
Q psy10063 560 LIFEEEFARI-KGHFGPI-----------------NSLAFHPDGKSYASGGEDGF-LISNTLSNGLDI-SEGSFTSSSTQ 619 (894)
Q Consensus 560 ~~~~~~~~~l-~~h~~~V-----------------~~l~~spdg~~l~sgs~Dg~-I~vwdl~~~~~~-~~~~~v~~~~~ 619 (894)
+..++..+.. .++...+ ..+.|||||++|+.++.|.. +++|++...... ........+.+
T Consensus 139 ~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~y 218 (740)
T 4a5s_A 139 EPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPY 218 (740)
T ss_dssp STTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEEC
T ss_pred CCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecC
Confidence 8877655422 2332222 35899999999998876544 888876422111 01223344555
Q ss_pred CcCCcEEEecCCeEEEEeccc---CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeE
Q psy10063 620 QPDGLVYPSQGGHIHSLSSHS---TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVE 696 (894)
Q Consensus 620 spdg~~l~~~~g~i~~~~~~~---~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 696 (894)
.+.|... ....+..+.... ........+..........-.
T Consensus 219 p~~G~~~--~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~----------------------------------- 261 (740)
T 4a5s_A 219 PKAGAVN--PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHY----------------------------------- 261 (740)
T ss_dssp CBTTSCC--CEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEE-----------------------------------
T ss_pred CCCcCcC--CeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeE-----------------------------------
Confidence 5555321 001233333322 100000011100000000000
Q ss_pred eccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCc----ccccCCCCcce-ecCCCCceE-----EE
Q psy10063 697 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGT----PFKLDGSDTPI-LAGPVDIGF-----KM 766 (894)
Q Consensus 697 ~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~----~~~~dg~~~~~-~~~h~~~v~-----~l 766 (894)
...+.++++|+.+++...... ....|.+|+...|. +.. ...+ ..+|...|. .+
T Consensus 262 ----------~~~~~wspdg~~~~~~~~r~~---~~~~i~~~d~~tg~~~~~~~~----~~~l~~~~~~~~v~~~~~~~p 324 (740)
T 4a5s_A 262 ----------LCDVTWATQERISLQWLRRIQ---NYSVMDICDYDESSGRWNCLV----ARQHIEMSTTGWVGRFRPSEP 324 (740)
T ss_dssp ----------EEEEEEEETTEEEEEEEESST---TEEEEEEEEEETTTTEEEECG----GGCEEEECSSSCSSSSSCCCC
T ss_pred ----------EEEEEEeCCCeEEEEEeCCCC---CEEEEEEEECCCCccccceeE----EEEeeeccCCceEccCcCCCc
Confidence 011234444443332211110 01123444333332 000 0001 133444433 67
Q ss_pred eeCCCCCEEE-Eec-CCC--cEEEEEccCCceeeccccCCCce--EeecCCCeEEEEecC---CCCceeEEEeecCCcce
Q psy10063 767 PEPPKREKLA-LAL-ADK--VSERYRDRKNKATAGFLLSCPDF--LFDFDTTREVTTTST---KVGKFDARFYHLIFEEE 837 (894)
Q Consensus 767 a~spdg~~La-tgs-~Dg--~I~iwd~~~~~~~~~~~~~~~~~--~fS~dg~~l~~as~d---~~g~~~I~vwd~~tg~~ 837 (894)
+|+|||+.|+ ..+ .+| .|++|++..++.. .+..+...+ .+++|++.++..+.. ..+...|+..++..++.
T Consensus 325 ~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~ 403 (740)
T 4a5s_A 325 HFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTK 403 (740)
T ss_dssp EECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEE
T ss_pred eEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCc
Confidence 8999999877 554 344 5888887765443 222222222 245778877766543 23444577777776554
Q ss_pred eeecc----CCCCCeeEEEEeeCCcEEEEecCC---CcEEEEecCcccccc
Q psy10063 838 FARIK----GHFGPINSLAFHPDGKSYASGGED---GFVRLHTFDQAYFDY 881 (894)
Q Consensus 838 l~~l~----gH~~~V~~l~fSpdg~~LaS~s~D---g~V~vWdl~~~~~~~ 881 (894)
...+. ++...+..+.||+||++++..... ..+.+++...++.+.
T Consensus 404 ~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~ 454 (740)
T 4a5s_A 404 VTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLR 454 (740)
T ss_dssp EEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEE
T ss_pred ceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEE
Confidence 33343 234678899999999977654332 367888887665433
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=1.4e-17 Score=184.74 Aligned_cols=114 Identities=7% Similarity=-0.025 Sum_probs=82.8
Q ss_pred eEEEeeCCCCCEEEEec-CCCcEEEEEccCCce--eecccc------CCCceEeecCCCeEEEEecC-CCCceeEEEeec
Q psy10063 763 GFKMPEPPKREKLALAL-ADKVSERYRDRKNKA--TAGFLL------SCPDFLFDFDTTREVTTTST-KVGKFDARFYHL 832 (894)
Q Consensus 763 v~~la~spdg~~Latgs-~Dg~I~iwd~~~~~~--~~~~~~------~~~~~~fS~dg~~l~~as~d-~~g~~~I~vwd~ 832 (894)
...++|+|||++|++++ .++.|++|++..++. +..+.. ....++|+|||++|+++... .. .|.||++
T Consensus 213 ~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~---~i~v~~~ 289 (361)
T 3scy_A 213 PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD---GVAIFKV 289 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC---EEEEEEE
T ss_pred CeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC---EEEEEEE
Confidence 56789999999887766 689999999886543 222211 12378899999999877655 22 5999998
Q ss_pred C--Ccc--eeeeccCCCCCeeEEEEeeCCcEEEEec-CCCcEEEEecC--ccccc
Q psy10063 833 I--FEE--EFARIKGHFGPINSLAFHPDGKSYASGG-EDGFVRLHTFD--QAYFD 880 (894)
Q Consensus 833 ~--tg~--~l~~l~gH~~~V~~l~fSpdg~~LaS~s-~Dg~V~vWdl~--~~~~~ 880 (894)
. .++ .+..+.. ...+.+|+|+|||++|++++ .++.|+||+++ .+++.
T Consensus 290 ~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 290 DETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLT 343 (361)
T ss_dssp CTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred cCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEe
Confidence 5 444 4444444 45788999999999888877 67899997664 55543
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=2.3e-17 Score=183.01 Aligned_cols=263 Identities=9% Similarity=0.005 Sum_probs=173.2
Q ss_pred CCCCEEEEEEccCCCEEEEecCC----CcEEEEecCC--CeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063 408 QSAKITSLLWGNLDQYIITGHAK----GDICTWDLRM--GRE--LESISGHAKEPINDMQFSKDATMFITASHSQAVEPI 479 (894)
Q Consensus 408 H~~~V~~l~~spdg~~L~sgs~D----g~I~iWd~~t--g~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V 479 (894)
|...+..|+|+|||++|++++.+ +.|++|++.. |+. +..+..+.. ..
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~-------------------------~p 102 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA-------------------------DP 102 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS-------------------------CE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC-------------------------Cc
Confidence 78889999999999999998875 7999999865 543 233332332 45
Q ss_pred EEEEEecCCCEEEEEE-CCCCEEEEEcCCCcEE----EEEeC-----------CCCeeEEEEcCCCCEEEEEEC-CCCeE
Q psy10063 480 NDMQFSKDATMFITAS-KDHTAKLFTTHDRQLL----KTYTT-----------ERPVNSAALSPILPHVVLGGG-QEARE 542 (894)
Q Consensus 480 ~~l~~spdg~~L~sgs-~Dg~V~iwdl~~~~~~----~~~~~-----------~~~v~~l~~spdg~~l~~~~~-~~~~~ 542 (894)
..+++ ++++|++++ .++.|.+|++.....+ ..+.+ ...+.+++|+|+|++|++++. ++.
T Consensus 103 ~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~-- 178 (361)
T 3scy_A 103 CYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ-- 178 (361)
T ss_dssp EEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE--
T ss_pred EEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE--
Confidence 66666 777777766 5789999999754322 22222 123578999999998888775 343
Q ss_pred EEeccCccceeeEEEEeccccc-------e------EEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCccc
Q psy10063 543 VTTTSTKVGKFDARFYHLIFEE-------E------FARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGLDI 608 (894)
Q Consensus 543 v~~~~~~~~~~~v~vwd~~~~~-------~------~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~~~ 608 (894)
|++|++.... . ......+...+.+++|+|||++|++++ .++.|++|+++.++.
T Consensus 179 ------------v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~- 245 (361)
T 3scy_A 179 ------------IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML- 245 (361)
T ss_dssp ------------EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE-
T ss_pred ------------EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce-
Confidence 6667655332 1 111223445678999999999887777 689999999853310
Q ss_pred cCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeec
Q psy10063 609 SEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNP 688 (894)
Q Consensus 609 ~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~ 688 (894)
..+...
T Consensus 246 -------------------------~~~~~~------------------------------------------------- 251 (361)
T 3scy_A 246 -------------------------DEIQTV------------------------------------------------- 251 (361)
T ss_dssp -------------------------EEEEEE-------------------------------------------------
T ss_pred -------------------------EEeEEE-------------------------------------------------
Confidence 000000
Q ss_pred cCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEee
Q psy10063 689 FDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPE 768 (894)
Q Consensus 689 ~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~ 768 (894)
.....+.....+++|
T Consensus 252 -----------------------------------------------------------------~~~~~~~~~~~~i~~ 266 (361)
T 3scy_A 252 -----------------------------------------------------------------AADTVNAQGSGDIHL 266 (361)
T ss_dssp -----------------------------------------------------------------ESCSSCCCCEEEEEE
T ss_pred -----------------------------------------------------------------ecCCCCCCCcccEEE
Confidence 000111223468899
Q ss_pred CCCCCEEEEecCC--CcEEEEEcc--CCc--eeecccc--CCCceEeecCCCeEEEEecCCCCceeEEEe--ecCCccee
Q psy10063 769 PPKREKLALALAD--KVSERYRDR--KNK--ATAGFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFY--HLIFEEEF 838 (894)
Q Consensus 769 spdg~~Latgs~D--g~I~iwd~~--~~~--~~~~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vw--d~~tg~~l 838 (894)
+|||++|+++..+ +.|++|++. .++ .+..+.. ....++|+|||++|+++..+.. .|.|| |.++|++.
T Consensus 267 spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~---~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 267 SPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTN---VIQIFERDQATGLLT 343 (361)
T ss_dssp CTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTT---EEEEEEECTTTCCEE
T ss_pred CCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCC---CEEEEEEECCCCcEe
Confidence 9999999776654 889999985 333 2322222 4567899999999998875432 57775 55677765
Q ss_pred eec-cCCCCCeeEEEEe
Q psy10063 839 ARI-KGHFGPINSLAFH 854 (894)
Q Consensus 839 ~~l-~gH~~~V~~l~fS 854 (894)
... ..|...+.||+|.
T Consensus 344 ~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 344 DIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp ECSCCEECSSEEEEEEE
T ss_pred ecceeeeCCCCeEEEEc
Confidence 543 2355678899986
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.81 E-value=1.5e-17 Score=183.39 Aligned_cols=160 Identities=15% Similarity=0.166 Sum_probs=111.1
Q ss_pred EEecCCCCEEEEEEccCCCEEEEecC---CCcEEEEecCCCeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063 404 QVTDQSAKITSLLWGNLDQYIITGHA---KGDICTWDLRMGRE--LESISGHAKEPINDMQFSKDATMFITASHSQAVEP 478 (894)
Q Consensus 404 ~l~~H~~~V~~l~~spdg~~L~sgs~---Dg~I~iWd~~tg~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~ 478 (894)
.+..+...+..|+|+|||+ |++++. ++.|++||+..++. +..+..+.. .
T Consensus 34 ~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~-------------------------~ 87 (347)
T 3hfq_A 34 GLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGT-------------------------P 87 (347)
T ss_dssp EEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESC-------------------------C
T ss_pred eeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCC-------------------------C
Confidence 4456678889999999999 555543 68999999987763 333333443 5
Q ss_pred eEEEEEecCCCEEEEEE-CCCCEEEEEcC-CCc--EEEEEeCC----------CCeeEEEEcCCCCEEEEEEC-CCCeEE
Q psy10063 479 INDMQFSKDATMFITAS-KDHTAKLFTTH-DRQ--LLKTYTTE----------RPVNSAALSPILPHVVLGGG-QEAREV 543 (894)
Q Consensus 479 V~~l~~spdg~~L~sgs-~Dg~V~iwdl~-~~~--~~~~~~~~----------~~v~~l~~spdg~~l~~~~~-~~~~~v 543 (894)
+..|+|+|||++|++++ .++.|++||+. .+. .+..+... ..+.+++|+|+|+ |+++.. ++.
T Consensus 88 p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~--- 163 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDK--- 163 (347)
T ss_dssp CSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTE---
T ss_pred CEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCE---
Confidence 77888888999888887 67899999996 333 33344332 2478999999999 555544 443
Q ss_pred EeccCccceeeEEEEecc-ccceE--EEccCC-CCCeEEEEEecCCCEEEE-EeCCCcEEEEECCC
Q psy10063 544 TTTSTKVGKFDARFYHLI-FEEEF--ARIKGH-FGPINSLAFHPDGKSYAS-GGEDGFLISNTLSN 604 (894)
Q Consensus 544 ~~~~~~~~~~~v~vwd~~-~~~~~--~~l~~h-~~~V~~l~~spdg~~l~s-gs~Dg~I~vwdl~~ 604 (894)
|++|++. .++.. ..+..+ ...+..++|+|||++|++ +..++.|++|+++.
T Consensus 164 -----------v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 164 -----------VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp -----------EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred -----------EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 7777777 44322 222222 236788999999997666 45678899998753
No 159
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=2.4e-18 Score=192.72 Aligned_cols=287 Identities=9% Similarity=-0.027 Sum_probs=178.4
Q ss_pred CEEEEEEccCCCEEEEecCC---CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063 411 KITSLLWGNLDQYIITGHAK---GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD 487 (894)
Q Consensus 411 ~V~~l~~spdg~~L~sgs~D---g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd 487 (894)
.+.+++|||||++|+.+..+ ..|++||+..++..+...++.. .+..+.|+||
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~-------------------------~~~~~~~spd 91 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGD-------------------------NTFGGFISTD 91 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCB-------------------------CTTTCEECTT
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCC-------------------------ccccceECCC
Confidence 37888999999998876433 4688999998876544333221 2233678888
Q ss_pred CCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEecc----------------Cccc
Q psy10063 488 ATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTS----------------TKVG 551 (894)
Q Consensus 488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~----------------~~~~ 551 (894)
|++|+.++.++.|++||+..++....+..... |+++|++|+....+....+|... ....
T Consensus 92 g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~-----~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 92 ERAFFYVKNELNLMKVDLETLEEQVIYTVDEE-----WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEECCTT-----EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred CCEEEEEEcCCcEEEEECCCCCcEEEEecccc-----cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 88888888888999999999887776664332 44444444433222111111000 0012
Q ss_pred eeeEEEEeccccceEEEccCCCCCeEEEEEec-CCCEEEEEeCCC------cEEEEECCCCccccCCCceeeeEECcCCc
Q psy10063 552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDG------FLISNTLSNGLDISEGSFTSSSTQQPDGL 624 (894)
Q Consensus 552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg------~I~vwdl~~~~~~~~~~~v~~~~~spdg~ 624 (894)
...|++||+..++..... .+...+..+.|+| ++++|+.++.++ .|.+|+++.++..
T Consensus 167 ~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~---------------- 229 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR---------------- 229 (396)
T ss_dssp CEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE----------------
T ss_pred cceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee----------------
Confidence 234889999887765444 5667889999999 788777665432 2444443221100
Q ss_pred EEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCccee
Q psy10063 625 VYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIE 704 (894)
Q Consensus 625 ~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~ 704 (894)
T Consensus 230 -------------------------------------------------------------------------------- 229 (396)
T 3c5m_A 230 -------------------------------------------------------------------------------- 229 (396)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCC-CCceEEEeeCCCCCEEEEecCC--
Q psy10063 705 MARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGP-VDIGFKMPEPPKREKLALALAD-- 781 (894)
Q Consensus 705 ~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h-~~~v~~la~spdg~~Latgs~D-- 781 (894)
.+.... ...+..++|+|||++|+.++.+
T Consensus 230 -------------------------------------------------~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 260 (396)
T 3c5m_A 230 -------------------------------------------------KIKEHAEGESCTHEFWIPDGSAMAYVSYFKG 260 (396)
T ss_dssp -------------------------------------------------ESSCCCTTEEEEEEEECTTSSCEEEEEEETT
T ss_pred -------------------------------------------------EeeccCCCccccceEECCCCCEEEEEecCCC
Confidence 000000 1135578899999988776544
Q ss_pred ---CcEEEEEccCCceeecc-ccCCCceEeec-CCCeEEEEecC------------CCCceeEEEeecCCcceeeeccCC
Q psy10063 782 ---KVSERYRDRKNKATAGF-LLSCPDFLFDF-DTTREVTTTST------------KVGKFDARFYHLIFEEEFARIKGH 844 (894)
Q Consensus 782 ---g~I~iwd~~~~~~~~~~-~~~~~~~~fS~-dg~~l~~as~d------------~~g~~~I~vwd~~tg~~l~~l~gH 844 (894)
+.|++||+..++..... ..... ++|++ ||++++++..+ ..+...|++||+..++. ..+..|
T Consensus 261 ~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~ 338 (396)
T 3c5m_A 261 QTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKH 338 (396)
T ss_dssp TCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEEC
T ss_pred CccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCC
Confidence 44999998877643211 11222 78999 99988775432 11234699999988765 345555
Q ss_pred CC-----------CeeEEEEeeCCcEEEEecC-CCcEEEEecC
Q psy10063 845 FG-----------PINSLAFHPDGKSYASGGE-DGFVRLHTFD 875 (894)
Q Consensus 845 ~~-----------~V~~l~fSpdg~~LaS~s~-Dg~V~vWdl~ 875 (894)
.. .+..++|+|||++|+.++. ++...||.++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 339 STSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 44 2567899999998887654 5666666654
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.80 E-value=8.5e-18 Score=187.12 Aligned_cols=245 Identities=11% Similarity=0.037 Sum_probs=165.3
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcC-CCcEEEEEeC--CCCeeEEEEcCCCCEE--EEEE-------------CCC
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTH-DRQLLKTYTT--ERPVNSAALSPILPHV--VLGG-------------GQE 539 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~-~~~~~~~~~~--~~~v~~l~~spdg~~l--~~~~-------------~~~ 539 (894)
.+..++|+|||++|++++.+ .|.+||+. ++++.....+ .+.+.+++|+|+|++| +++. .++
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 46778889999988888887 89999997 7877654442 2446779999999963 3332 233
Q ss_pred CeEEEeccCccceeeEEEEecc-ccceEEEcc----CCCCCeEEEEEecCCCEEEEEeC-CCcEEEEECC-CCccccCCC
Q psy10063 540 AREVTTTSTKVGKFDARFYHLI-FEEEFARIK----GHFGPINSLAFHPDGKSYASGGE-DGFLISNTLS-NGLDISEGS 612 (894)
Q Consensus 540 ~~~v~~~~~~~~~~~v~vwd~~-~~~~~~~l~----~h~~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~-~~~~~~~~~ 612 (894)
. +++|++. .++....+. .+...+.+++|+|||++|++++. ++.|++|+++ .++..
T Consensus 120 ~--------------v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~---- 181 (365)
T 1jof_A 120 Y--------------GNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE---- 181 (365)
T ss_dssp E--------------EEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE----
T ss_pred e--------------EEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEE----
Confidence 3 7788876 355443333 25567999999999998887764 6789999985 32100
Q ss_pred ceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCc
Q psy10063 613 FTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQ 692 (894)
Q Consensus 613 ~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 692 (894)
.+..
T Consensus 182 ----------------------~~~~------------------------------------------------------ 185 (365)
T 1jof_A 182 ----------------------LVGS------------------------------------------------------ 185 (365)
T ss_dssp ----------------------EEEE------------------------------------------------------
T ss_pred ----------------------Eeee------------------------------------------------------
Confidence 0000
Q ss_pred ceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCC
Q psy10063 693 QSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKR 772 (894)
Q Consensus 693 ~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg 772 (894)
+ .+..|...+..++|+|||
T Consensus 186 ------------------------------------------~-------------------~~~~~g~~p~~~~~spdg 204 (365)
T 1jof_A 186 ------------------------------------------V-------------------DAPDPGDHPRWVAMHPTG 204 (365)
T ss_dssp ------------------------------------------E-------------------ECSSTTCCEEEEEECTTS
T ss_pred ------------------------------------------E-------------------ecCCCCCCCCEeEECCCC
Confidence 0 000112346688999999
Q ss_pred CEEEEecC-CCcEEEEEcc--CCcee------ecccc-------------CCCceE-eecCCCeEEEEecCCCC--ceeE
Q psy10063 773 EKLALALA-DKVSERYRDR--KNKAT------AGFLL-------------SCPDFL-FDFDTTREVTTTSTKVG--KFDA 827 (894)
Q Consensus 773 ~~Latgs~-Dg~I~iwd~~--~~~~~------~~~~~-------------~~~~~~-fS~dg~~l~~as~d~~g--~~~I 827 (894)
++|++++. ++.|.+|++. +++.. ..+.. ....++ |+|||++|+++...... ...|
T Consensus 205 ~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i 284 (365)
T 1jof_A 205 NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYI 284 (365)
T ss_dssp SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEE
T ss_pred CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeE
Confidence 99887764 6889999865 34331 11111 134678 99999999876543310 1149
Q ss_pred EEeecC-Ccceee---eccCCCCCeeEEEEee---CCcEEEEecCC-CcEEEEecCccc
Q psy10063 828 RFYHLI-FEEEFA---RIKGHFGPINSLAFHP---DGKSYASGGED-GFVRLHTFDQAY 878 (894)
Q Consensus 828 ~vwd~~-tg~~l~---~l~gH~~~V~~l~fSp---dg~~LaS~s~D-g~V~vWdl~~~~ 878 (894)
+||++. .|++.. .+..+...+..++|+| ||++|++++.+ +.|+||+++...
T Consensus 285 ~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 285 AGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp EEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred EEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence 999996 566543 2334556678899999 89999998865 899999998763
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=2.3e-18 Score=204.36 Aligned_cols=184 Identities=11% Similarity=0.035 Sum_probs=129.1
Q ss_pred ceeeeeccCccEEEecCC--CeEE---------EEEecCC-CCEEEEEEccCCCEEEEecC---CCcEEEEecCC---Ce
Q psy10063 381 DRLNSMSPAARKLATNAE--PVVK---------MQVTDQS-AKITSLLWGNLDQYIITGHA---KGDICTWDLRM---GR 442 (894)
Q Consensus 381 ~~~~~~s~dg~~l~~~~~--~~~~---------~~l~~H~-~~V~~l~~spdg~~L~sgs~---Dg~I~iWd~~t---g~ 442 (894)
...++|++||+.|++.+. +.+. ..+..|. ..|.+++|||| ++|++++. +...+||.+.. ++
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~ 102 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGE 102 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCc
Confidence 455678999999987543 2222 2344455 68999999999 77877764 45566665533 33
Q ss_pred EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCE-EEEEECCCCEEEEEcCCCcEEEEEeCCCCee
Q psy10063 443 ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATM-FITASKDHTAKLFTTHDRQLLKTYTTERPVN 521 (894)
Q Consensus 443 ~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~-L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~ 521 (894)
.. .+.... .+..++|+|||+. +++.+.++.+.|||+.++++.....+.. .
T Consensus 103 ~~-~l~~~~--------------------------~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~ 153 (582)
T 3o4h_A 103 EQ-RLEAVK--------------------------PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--F 153 (582)
T ss_dssp CE-ECTTSC--------------------------SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--C
T ss_pred cc-cccCCC--------------------------CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--c
Confidence 22 343332 2334566776643 3334445556699999998877666554 8
Q ss_pred EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC--cEEE
Q psy10063 522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG--FLIS 599 (894)
Q Consensus 522 ~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg--~I~v 599 (894)
+++|+|||++|++++.++. ....|++||+..++.. .+..|.+.+..++|+|||++|+++..++ .|++
T Consensus 154 ~~~~spDG~~la~~~~~~~----------~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~ 222 (582)
T 3o4h_A 154 GFVSDIRGDLIAGLGFFGG----------GRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVT 222 (582)
T ss_dssp EEEEEEETTEEEEEEEEET----------TEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEE
T ss_pred eEEECCCCCEEEEEEEcCC----------CCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEE
Confidence 9999999999998776532 1123899999887765 6678889999999999999999888888 7899
Q ss_pred EECCCC
Q psy10063 600 NTLSNG 605 (894)
Q Consensus 600 wdl~~~ 605 (894)
||++++
T Consensus 223 ~d~~~~ 228 (582)
T 3o4h_A 223 VDPRDG 228 (582)
T ss_dssp ECTTTC
T ss_pred EcCCCC
Confidence 988654
No 162
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.78 E-value=5.8e-17 Score=180.05 Aligned_cols=280 Identities=11% Similarity=0.039 Sum_probs=187.5
Q ss_pred CCCEEEEec------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063 420 LDQYIITGH------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT 493 (894)
Q Consensus 420 dg~~L~sgs------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s 493 (894)
++++|++.. .|+.|++||..+++.+..+..+.. + .|+|+|||++|++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~-------------------------p--~i~~spdg~~lyv 66 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFN-------------------------G--HVQVSNDGKKIYT 66 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEE-------------------------E--EEEECTTSSEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCC-------------------------C--ceEECCCCCEEEE
Confidence 556666543 477999999999998888876543 2 5666677776666
Q ss_pred EE----------CCCCEEEEEcCCCcEEEEEeC-------CCCeeEEEEcCCCCEEEEEECC-CCeEEEeccCccceeeE
Q psy10063 494 AS----------KDHTAKLFTTHDRQLLKTYTT-------ERPVNSAALSPILPHVVLGGGQ-EAREVTTTSTKVGKFDA 555 (894)
Q Consensus 494 gs----------~Dg~V~iwdl~~~~~~~~~~~-------~~~v~~l~~spdg~~l~~~~~~-~~~~v~~~~~~~~~~~v 555 (894)
+. .++.|.+||+.+++++..+.. ......++|+|||++|+++... .. .|
T Consensus 67 ~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~-------------~v 133 (361)
T 2oiz_A 67 MTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPAT-------------SI 133 (361)
T ss_dssp EEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSE-------------EE
T ss_pred EEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCC-------------eE
Confidence 65 256799999999999888763 2457889999999999998753 22 28
Q ss_pred EEEeccccceEEE-ccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeE
Q psy10063 556 RFYHLIFEEEFAR-IKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHI 633 (894)
Q Consensus 556 ~vwd~~~~~~~~~-l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i 633 (894)
.+||+..++.+.. +... ....+.+.|++ ..+++.+.||.+.+|+++... +...
T Consensus 134 ~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g-----------------~~~~------ 188 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDG-----------------KVAS------ 188 (361)
T ss_dssp EEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEETTSSEEEEEECTTS-----------------SEEE------
T ss_pred EEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECCCCcEEEEEECCCC-----------------cEee------
Confidence 9999999988887 6432 22346677876 678888999999999875311 0000
Q ss_pred EEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEc
Q psy10063 634 HSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSIN 713 (894)
Q Consensus 634 ~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s 713 (894)
..... .+++
T Consensus 189 -~~~~~---------------------~~~~------------------------------------------------- 197 (361)
T 2oiz_A 189 -QSRSK---------------------QMFS------------------------------------------------- 197 (361)
T ss_dssp -EEECC---------------------CCSC-------------------------------------------------
T ss_pred -ecccc---------------------ceEc-------------------------------------------------
Confidence 00000 0000
Q ss_pred CCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCc
Q psy10063 714 HSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNK 793 (894)
Q Consensus 714 ~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~ 793 (894)
.. ... ..+.+++++..++..+.++.|.+||+....
T Consensus 198 ----------------------------------~~----------~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~ 232 (361)
T 2oiz_A 198 ----------------------------------VK----------DDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDE 232 (361)
T ss_dssp ----------------------------------TT----------TSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSS
T ss_pred ----------------------------------CC----------CCc-eEEEecccCCEEEEEeCCCeEEEEEecCCC
Confidence 00 000 001112344444445556667777664332
Q ss_pred ee--ec-------------cccCCCceEeecCCCeEEEEec-CC------CCceeEEEeecCCcceeeeccCCCCCeeEE
Q psy10063 794 AT--AG-------------FLLSCPDFLFDFDTTREVTTTS-TK------VGKFDARFYHLIFEEEFARIKGHFGPINSL 851 (894)
Q Consensus 794 ~~--~~-------------~~~~~~~~~fS~dg~~l~~as~-d~------~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l 851 (894)
.. .. ...+...++|++|+++++++.. ++ .+...|.+||+++++.+..+..|. +.+|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~i 310 (361)
T 2oiz_A 233 VKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSM 310 (361)
T ss_dssp CEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEE
T ss_pred ceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEE
Confidence 11 10 0112234789999999888754 11 012269999999999999999887 9999
Q ss_pred EEeeCCcEEEEecCCCcEEEEecCcc--cccccc
Q psy10063 852 AFHPDGKSYASGGEDGFVRLHTFDQA--YFDYTF 883 (894)
Q Consensus 852 ~fSpdg~~LaS~s~Dg~V~vWdl~~~--~~~~~~ 883 (894)
+|+|||++|++++. +.|.|||.+++ +++..+
T Consensus 311 a~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 311 TIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp EEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred EECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence 99999999999887 99999999999 777664
No 163
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=8.5e-18 Score=191.55 Aligned_cols=171 Identities=13% Similarity=0.138 Sum_probs=126.9
Q ss_pred CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063 408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD 487 (894)
Q Consensus 408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd 487 (894)
+...+..|+|++++.+|++++.|+ |+||+............+.. .+ ..+.+. ..... -..|.+|+|+|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~-~~--~~~~~~----~~~~~---~~~v~~l~~spd 103 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPN-KI--VDKVQG----LLVPM---KFPIHHLALSCD 103 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTT-CE--EECCCC----EEECC---SSCEEEEEECTT
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcc-cc--cccCcc----ccccC---CCcccEEEEcCC
Confidence 345689999999999999999887 99988642211100001100 00 001000 00000 026999999999
Q ss_pred CCEEE----EEECCCCEEEEEcCCC--------cEE---EEEe-CCCCeeEEEEcCC-CCEEEEEECCCCeEEEeccCcc
Q psy10063 488 ATMFI----TASKDHTAKLFTTHDR--------QLL---KTYT-TERPVNSAALSPI-LPHVVLGGGQEAREVTTTSTKV 550 (894)
Q Consensus 488 g~~L~----sgs~Dg~V~iwdl~~~--------~~~---~~~~-~~~~v~~l~~spd-g~~l~~~~~~~~~~v~~~~~~~ 550 (894)
|++|+ +|+.|+.|+|||++.+ +.+ ..+. |...|.+++|+|+ +.+|++++.++.
T Consensus 104 g~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~---------- 173 (434)
T 2oit_A 104 NLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS---------- 173 (434)
T ss_dssp SCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC----------
T ss_pred CCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe----------
Confidence 99999 7888999999998754 222 2233 4678999999998 789999999997
Q ss_pred ceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063 551 GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS 603 (894)
Q Consensus 551 ~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~ 603 (894)
|++||++.+..+....+|...|.+++|+|+|++|++|+.||.|++||++
T Consensus 174 ----v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 174 ----IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp ----EEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred ----EEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 8999999887777777899999999999999999999999999999986
No 164
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=9.2e-18 Score=191.28 Aligned_cols=187 Identities=12% Similarity=0.052 Sum_probs=143.5
Q ss_pred ccceeeeeccCccEEEecCCCeEEEE-------------------------EecCCCCEEEEEEccCCCEEE----EecC
Q psy10063 379 SVDRLNSMSPAARKLATNAEPVVKMQ-------------------------VTDQSAKITSLLWGNLDQYII----TGHA 429 (894)
Q Consensus 379 ~~~~~~~~s~dg~~l~~~~~~~~~~~-------------------------l~~H~~~V~~l~~spdg~~L~----sgs~ 429 (894)
....++++++++.+|+.+..+.+++. ...|.+.|.+|+|+|+|++|+ +|+.
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred CCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 34566788888888887765544431 112456799999999999999 8899
Q ss_pred CCcEEEEecCCC--------e---EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC-CCEEEEEECC
Q psy10063 430 KGDICTWDLRMG--------R---ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD-ATMFITASKD 497 (894)
Q Consensus 430 Dg~I~iWd~~tg--------~---~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd-g~~L~sgs~D 497 (894)
|+.|+|||+..+ + .+..+.+|.. .|.+|+|+|+ +.+|++++.|
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~-------------------------~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG-------------------------MVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG-------------------------SEEEEEECSSCTTEEEEEETT
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCC-------------------------ceEEEEECCCCCCEEEEEECC
Confidence 999999998754 1 1344455665 7888888887 8899999999
Q ss_pred CCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC----
Q psy10063 498 HTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH---- 572 (894)
Q Consensus 498 g~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h---- 572 (894)
|.|+|||++.++.+.... |...|.+++|+|+|++|++++.++. |++||++ ++....+..|
T Consensus 172 g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~--------------v~iwd~~-~~~~~~~~~~~~~~ 236 (434)
T 2oit_A 172 GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGT--------------VVQYLPT-LQEKKVIPCPPFYE 236 (434)
T ss_dssp SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSC--------------EEEECTT-CCEEEEECCCTTCC
T ss_pred CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCc--------------EEEEccC-CcccccccCCcccC
Confidence 999999999987665444 4688999999999999999999997 7888887 5555555433
Q ss_pred ---CCCeEEEEEecCCCEEEEE-eCCCc------EEEEECCCC
Q psy10063 573 ---FGPINSLAFHPDGKSYASG-GEDGF------LISNTLSNG 605 (894)
Q Consensus 573 ---~~~V~~l~~spdg~~l~sg-s~Dg~------I~vwdl~~~ 605 (894)
...|.+++|++++.+|++. ..||. +++|++...
T Consensus 237 ~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 237 SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 3389999999988877543 34433 899999764
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=1.8e-16 Score=193.55 Aligned_cols=197 Identities=7% Similarity=-0.089 Sum_probs=136.6
Q ss_pred eeeeeccCccEEEecCCCeE----------EEEEecCCCC-----EEEEEEccCCCEEEEecCC---------CcEEEEe
Q psy10063 382 RLNSMSPAARKLATNAEPVV----------KMQVTDQSAK-----ITSLLWGNLDQYIITGHAK---------GDICTWD 437 (894)
Q Consensus 382 ~~~~~s~dg~~l~~~~~~~~----------~~~l~~H~~~-----V~~l~~spdg~~L~sgs~D---------g~I~iWd 437 (894)
....|++||++|+.. +..+ ...+.+|... ...++|||||++|++++.+ +.+.|||
T Consensus 20 ~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d 98 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (740)
T ss_dssp CCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred cccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence 345788888877765 3222 2345566533 2347899999999998876 5677999
Q ss_pred cCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC
Q psy10063 438 LRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE 517 (894)
Q Consensus 438 ~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~ 517 (894)
+.++++. .+..|.. .+..++|||||++||.++ |+.|++||+..+++.+.....
T Consensus 99 ~~~~~~~-~l~~~~~-------------------------~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g 151 (740)
T 4a5s_A 99 LNKRQLI-TEERIPN-------------------------NTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTG 151 (740)
T ss_dssp TTTTEEC-CSSCCCT-------------------------TEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCC
T ss_pred CCCCcEE-EcccCCC-------------------------cceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCC
Confidence 9999854 3555555 577788888888888874 688999999988765532211
Q ss_pred --CCe-----------------eEEEEcCCCCEEEEEECCCC-eEEEeccC---------------------ccceeeEE
Q psy10063 518 --RPV-----------------NSAALSPILPHVVLGGGQEA-REVTTTST---------------------KVGKFDAR 556 (894)
Q Consensus 518 --~~v-----------------~~l~~spdg~~l~~~~~~~~-~~v~~~~~---------------------~~~~~~v~ 556 (894)
..+ .+++|||||++|+++..+.. +.+|.+.. ......|+
T Consensus 152 ~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~ 231 (740)
T 4a5s_A 152 KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFF 231 (740)
T ss_dssp BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEE
T ss_pred CccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEE
Confidence 112 35899999999999876544 55554321 12234689
Q ss_pred EEeccc---cc--eEEEcc------CCCCCeEEEEEecCCCEEEEEeC----CCcEEEEECCCCc
Q psy10063 557 FYHLIF---EE--EFARIK------GHFGPINSLAFHPDGKSYASGGE----DGFLISNTLSNGL 606 (894)
Q Consensus 557 vwd~~~---~~--~~~~l~------~h~~~V~~l~~spdg~~l~sgs~----Dg~I~vwdl~~~~ 606 (894)
+||+.. ++ ....+. +|...+..++|+|||++++.... +..|++||+.+++
T Consensus 232 v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 232 VVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 999998 73 223333 48888999999999997665532 2369999998775
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=2.8e-17 Score=198.02 Aligned_cols=192 Identities=10% Similarity=0.009 Sum_probs=141.2
Q ss_pred EEecCCCCEEEEEEccCCCEEEEe--cCCCcEEEEecCCCeEEEEecCCCCCCee---------EEEEc--CCCCE-EEE
Q psy10063 404 QVTDQSAKITSLLWGNLDQYIITG--HAKGDICTWDLRMGRELESISGHAKEPIN---------DMQFS--KDATM-FIT 469 (894)
Q Consensus 404 ~l~~H~~~V~~l~~spdg~~L~sg--s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~---------~v~~s--pdg~~-la~ 469 (894)
.+.+|...|..++|++++-+++.. +.++...||.+..+...+.+..+.. .|. .+.|+ |||++ |+.
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPW-NVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTC-CBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCc-cccccccccCCccceeeeecCCCeEEEE
Confidence 356799999999999887666766 6688999999765666777777765 565 56666 99998 776
Q ss_pred EeC----------C----CCc------------cceEEEEEecCCCEEEEEECC----------CCEEEEEcCC------
Q psy10063 470 ASH----------S----QAV------------EPINDMQFSKDATMFITASKD----------HTAKLFTTHD------ 507 (894)
Q Consensus 470 ~~~----------d----~~i------------~~V~~l~~spdg~~L~sgs~D----------g~V~iwdl~~------ 507 (894)
.+. + +.. ..+.+++|+|||++|++++.| ..|++||+..
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred EECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 653 2 221 246789999999999999877 5899999988
Q ss_pred CcEEEEE-eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc-cc---ceEEEccCCCCCeEEEEEe
Q psy10063 508 RQLLKTY-TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI-FE---EEFARIKGHFGPINSLAFH 582 (894)
Q Consensus 508 ~~~~~~~-~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~-~~---~~~~~l~~h~~~V~~l~~s 582 (894)
++..... .+...+..++|||||++|++++.++....| ...+|++||+. .+ +......+|...+..++|+
T Consensus 177 ~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~------~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 177 SAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPW------EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp GGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTT------TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred CceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCC------CCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence 6665544 455678889999999999988765421111 11248999998 56 4444445567889999999
Q ss_pred cCCCEEEEEeCCCcEEEEEC
Q psy10063 583 PDGKSYASGGEDGFLISNTL 602 (894)
Q Consensus 583 pdg~~l~sgs~Dg~I~vwdl 602 (894)
|||+++++++.++.++||.+
T Consensus 251 pdg~l~~~~~~~~~~~l~~~ 270 (662)
T 3azo_A 251 PDGSLIVATDRTGWWNLHRV 270 (662)
T ss_dssp TTSCEEEEECTTSSCEEEEE
T ss_pred CCCeEEEEECCCCCeEEEEE
Confidence 99998888888885444433
No 167
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.75 E-value=6.2e-16 Score=169.67 Aligned_cols=125 Identities=12% Similarity=0.051 Sum_probs=88.5
Q ss_pred CEEEEEEccCCCEEE-EecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063 411 KITSLLWGNLDQYII-TGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT 489 (894)
Q Consensus 411 ~V~~l~~spdg~~L~-sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~ 489 (894)
.+.+++|+|||++|+ ++..++.|++||+.+++.+..+..+.. +-.. ...+.+++|+|||+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~-~~~~------------------~~~~~~~~~spdg~ 104 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV-PGEV------------------GRSMYSFAISPDGK 104 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS-TTEE------------------EECSSCEEECTTSS
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc-cccc------------------cccccceEECCCCC
Confidence 688999999998654 556789999999999998877764321 0000 00245566666666
Q ss_pred EEEEEECC------------CCEEEEEcCCCc---EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063 490 MFITASKD------------HTAKLFTTHDRQ---LLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD 554 (894)
Q Consensus 490 ~L~sgs~D------------g~V~iwdl~~~~---~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~ 554 (894)
+|++++.+ +.|++||+.+++ .+..+.+...+.+++|+|+|+ |++++ +.
T Consensus 105 ~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~--~~-------------- 167 (349)
T 1jmx_B 105 EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAG--PD-------------- 167 (349)
T ss_dssp EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEES--SS--------------
T ss_pred EEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEcc--Cc--------------
Confidence 66665543 899999998844 445566666799999999999 66542 21
Q ss_pred EEEEeccccceEEEccC
Q psy10063 555 ARFYHLIFEEEFARIKG 571 (894)
Q Consensus 555 v~vwd~~~~~~~~~l~~ 571 (894)
|++||+..++.+..+..
T Consensus 168 i~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 168 IYKMDVKTGKYTVALPL 184 (349)
T ss_dssp EEEECTTTCCEEEEECS
T ss_pred EEEEeCCCCceeccccc
Confidence 78899988887776653
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.74 E-value=8.6e-16 Score=170.86 Aligned_cols=169 Identities=10% Similarity=0.055 Sum_probs=112.5
Q ss_pred cCCCCEEEEEEccCCCEEEEecCCCcEEEEecC-CCeEEEEecCCCCCCeeEEEEcCCCCEEE-EEeCCCCccceEEEEE
Q psy10063 407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLR-MGRELESISGHAKEPINDMQFSKDATMFI-TASHSQAVEPINDMQF 484 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~-tg~~~~~l~~h~~~~V~~v~~spdg~~la-~~~~d~~i~~V~~l~~ 484 (894)
++...+..++|+|||++|++++.+ .|.+||+. +|++++.......+.+.+++|+|||++|+ .....
T Consensus 37 ~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~----------- 104 (365)
T 1jof_A 37 PQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQ----------- 104 (365)
T ss_dssp CTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSS-----------
T ss_pred CCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecC-----------
Confidence 345578899999999999999888 99999997 78765443311111233445555554311 11100
Q ss_pred ecCCCEEEEEE----CCCCEEEEEcC-CCcEEEEEe-----CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063 485 SKDATMFITAS----KDHTAKLFTTH-DRQLLKTYT-----TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD 554 (894)
Q Consensus 485 spdg~~L~sgs----~Dg~V~iwdl~-~~~~~~~~~-----~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~ 554 (894)
+++...+. .++.+++|++. ++++...+. +...+.+++|+|||++|+++..... .
T Consensus 105 ---~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~-------------~ 168 (365)
T 1jof_A 105 ---PPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTAN-------------K 168 (365)
T ss_dssp ---TTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT-------------E
T ss_pred ---CcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCC-------------E
Confidence 11111121 68899999997 576654443 3467999999999999988764322 2
Q ss_pred EEEEecc-ccceE--EEcc--CCCCCeEEEEEecCCCEEEEEeC-CCcEEEEECC
Q psy10063 555 ARFYHLI-FEEEF--ARIK--GHFGPINSLAFHPDGKSYASGGE-DGFLISNTLS 603 (894)
Q Consensus 555 v~vwd~~-~~~~~--~~l~--~h~~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~ 603 (894)
|++|++. .++.. ..+. .|...+..++|+|||++|++++. ++.|.+|+++
T Consensus 169 v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 169 LWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 7888887 56543 2333 24567999999999999888775 6889999875
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.73 E-value=4.3e-17 Score=182.48 Aligned_cols=207 Identities=10% Similarity=-0.030 Sum_probs=138.3
Q ss_pred eeeeccCccEEEecCCC----eEE-E--------EEecCCCC-EEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec
Q psy10063 383 LNSMSPAARKLATNAEP----VVK-M--------QVTDQSAK-ITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS 448 (894)
Q Consensus 383 ~~~~s~dg~~l~~~~~~----~~~-~--------~l~~H~~~-V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~ 448 (894)
..+|||||++|+..... .+. + .+..+... +.++.|+|||++|++++.++.|++||+..++....+.
T Consensus 40 ~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~ 119 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYT 119 (396)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred cCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEe
Confidence 34688999887755321 121 1 22233333 3347899999999999988899999999888766665
Q ss_pred CCCCCCeeEEEEcCCCCEEEEEeCCCCcc-ceEEEEEecCCCEEEEE-----ECCCCEEEEEcCCCcEEEEEeCCCCeeE
Q psy10063 449 GHAKEPINDMQFSKDATMFITASHSQAVE-PINDMQFSKDATMFITA-----SKDHTAKLFTTHDRQLLKTYTTERPVNS 522 (894)
Q Consensus 449 ~h~~~~V~~v~~spdg~~la~~~~d~~i~-~V~~l~~spdg~~L~sg-----s~Dg~V~iwdl~~~~~~~~~~~~~~v~~ 522 (894)
.+.. |+++|++|+....+.... ....++|+|++++|+.+ ..+..|++||+..++......+...+..
T Consensus 120 ~~~~-------~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~ 192 (396)
T 3c5m_A 120 VDEE-------WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGH 192 (396)
T ss_dssp CCTT-------EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEE
T ss_pred cccc-------cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCccccc
Confidence 5543 667777776554432110 11124678999887765 3567899999999988877777788999
Q ss_pred EEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC--CCCeEEEEEecCCCEEEEEeCC-----
Q psy10063 523 AALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH--FGPINSLAFHPDGKSYASGGED----- 594 (894)
Q Consensus 523 l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h--~~~V~~l~~spdg~~l~sgs~D----- 594 (894)
++|+| +|++|++.+.++. ......|.+||+..++.. .+..+ ...+..++|+|||++|+.++.+
T Consensus 193 ~~~sp~dg~~l~~~~~~~~--------~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 263 (396)
T 3c5m_A 193 PIYRPFDDSTVGFCHEGPH--------DLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTD 263 (396)
T ss_dssp EEEETTEEEEEEEEECSCS--------SSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCC
T ss_pred ceECCCCCCEEEEEecCCC--------CCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCcc
Confidence 99999 8888887764321 000013778887755543 33333 2357889999999988776543
Q ss_pred CcEEEEECCCC
Q psy10063 595 GFLISNTLSNG 605 (894)
Q Consensus 595 g~I~vwdl~~~ 605 (894)
+.|++||+..+
T Consensus 264 ~~l~~~d~~~g 274 (396)
T 3c5m_A 264 RVIYKANPETL 274 (396)
T ss_dssp EEEEEECTTTC
T ss_pred ceEEEEECCCC
Confidence 33888887554
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.72 E-value=2.9e-16 Score=175.58 Aligned_cols=124 Identities=10% Similarity=-0.005 Sum_probs=88.8
Q ss_pred EEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEEC-CC--CEEEEEcCCCc
Q psy10063 433 ICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASK-DH--TAKLFTTHDRQ 509 (894)
Q Consensus 433 I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~-Dg--~V~iwdl~~~~ 509 (894)
...+|..+|..+..+..|.. .+..+ .+...+|+|||++|+.++. ++ .|.+||+..++
T Consensus 12 ~~~~~~~~g~~~~~lt~~~~-~~~~~-------------------~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~ 71 (388)
T 3pe7_A 12 DTYQDASTGAQVTRLTPPDV-TCHRN-------------------YFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV 71 (388)
T ss_dssp EEEECTTTCCEEEECSCTTS-CEECC-------------------CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCE
T ss_pred eEEecCCCCcceEEecCCcc-cccch-------------------hhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCc
Confidence 34457788888888887764 11110 1223678888888888876 56 38888999998
Q ss_pred EEEEEeCCC-CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEE--ecCCC
Q psy10063 510 LLKTYTTER-PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF--HPDGK 586 (894)
Q Consensus 510 ~~~~~~~~~-~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~--spdg~ 586 (894)
..+...++. .+.+++|+|||++|+++..++. |++||+..++....+..+...+....| +++++
T Consensus 72 ~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~--------------l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~ 137 (388)
T 3pe7_A 72 ATQLTEGRGDNTFGGFLSPDDDALFYVKDGRN--------------LMRVDLATLEENVVYQVPAEWVGYGTWVANSDCT 137 (388)
T ss_dssp EEECCCSSCBCSSSCEECTTSSEEEEEETTTE--------------EEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS
T ss_pred eEEeeeCCCCCccceEEcCCCCEEEEEeCCCe--------------EEEEECCCCcceeeeechhhcccccceeECCCCC
Confidence 887766543 4457889999999999997764 889999988877766666665544443 78888
Q ss_pred EEEE
Q psy10063 587 SYAS 590 (894)
Q Consensus 587 ~l~s 590 (894)
+|+.
T Consensus 138 ~l~~ 141 (388)
T 3pe7_A 138 KLVG 141 (388)
T ss_dssp EEEE
T ss_pred eecc
Confidence 7764
No 171
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.71 E-value=2.3e-14 Score=167.65 Aligned_cols=325 Identities=9% Similarity=-0.011 Sum_probs=213.0
Q ss_pred cCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCC
Q psy10063 419 NLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDH 498 (894)
Q Consensus 419 pdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg 498 (894)
+.+.++++...++.|.|||..+++.+..+.... .+.++.|+|||++|++++.|+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~--------------------------~p~~v~~SpDGr~lyv~~~dg 218 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY--------------------------AVHISRLSASGRYLFVIGRDG 218 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS--------------------------CEEEEEECTTSCEEEEEETTS
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC--------------------------CccceEECCCCCEEEEEcCCC
Confidence 445577778889999999999999998887554 366788889999999999999
Q ss_pred CEEEEEcC--CCcEEEEEeCCCCeeEEEEc----CCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC-
Q psy10063 499 TAKLFTTH--DRQLLKTYTTERPVNSAALS----PILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG- 571 (894)
Q Consensus 499 ~V~iwdl~--~~~~~~~~~~~~~v~~l~~s----pdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~- 571 (894)
.|.+||+. +++.+..+........++|+ |||++|+++...... |.++|..+.+.+..+..
T Consensus 219 ~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~-------------v~ViD~~t~~~~~~i~~~ 285 (567)
T 1qks_A 219 KVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQ-------------YVIMDGETLEPKKIQSTR 285 (567)
T ss_dssp EEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTE-------------EEEEETTTCCEEEEEECC
T ss_pred eEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCe-------------EEEEECCCCcEEEEEecc
Confidence 99999996 88888888877778999999 699999998876542 78889888888876542
Q ss_pred ---------C-CCCeEEEEEecCCCE-EEEEeCCCcEEEEECCCCc-----cccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063 572 ---------H-FGPINSLAFHPDGKS-YASGGEDGFLISNTLSNGL-----DISEGSFTSSSTQQPDGLVYPSQGGHIHS 635 (894)
Q Consensus 572 ---------h-~~~V~~l~~spdg~~-l~sgs~Dg~I~vwdl~~~~-----~~~~~~~v~~~~~spdg~~l~~~~g~i~~ 635 (894)
| ...+..+.+++++.. ++....+|.|.++|+...+ .+..+.....+.|+|+|+++..
T Consensus 286 ~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~v------- 358 (567)
T 1qks_A 286 GMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFIT------- 358 (567)
T ss_dssp EECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEE-------
T ss_pred ccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEE-------
Confidence 1 126788888888664 5555667999999987653 2223455556667776665421
Q ss_pred EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063 636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS 715 (894)
Q Consensus 636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~ 715 (894)
+.. ....|.+++...
T Consensus 359 ----------------a~~-~sn~V~ViD~~t------------------------------------------------ 373 (567)
T 1qks_A 359 ----------------AAN-ARNKLVVIDTKE------------------------------------------------ 373 (567)
T ss_dssp ----------------EEG-GGTEEEEEETTT------------------------------------------------
T ss_pred ----------------EeC-CCCeEEEEECCC------------------------------------------------
Confidence 110 011111111000
Q ss_pred CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEE-EEec-CCCcEEEEEccC--
Q psy10063 716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKL-ALAL-ADKVSERYRDRK-- 791 (894)
Q Consensus 716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~L-atgs-~Dg~I~iwd~~~-- 791 (894)
++++... . ..+ ...|.+.... .++|++..+ +++. .++.|.++|...
T Consensus 374 ~kl~~~i-------------~-----------vgg-----~~Phpg~g~~-~~~p~~g~v~~t~~~g~~~Vsvid~~~~~ 423 (567)
T 1qks_A 374 GKLVAIE-------------D-----------TGG-----QTPHPGRGAN-FVHPTFGPVWATSHMGDDSVALIGTDPEG 423 (567)
T ss_dssp TEEEEEE-------------E-----------CSS-----SSBCCTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCTTT
T ss_pred CcEEEEE-------------e-----------ccC-----cCCCCcccee-eECCCCCcEEEeCCCCCCeEEEecCCCCC
Confidence 0000000 0 000 0012111111 256774444 4443 568899999877
Q ss_pred -----CceeeccccCC---CceEeecCCCeEEEEecCCC---CceeEEEeecCCc-----c-eeeecc--------CCCC
Q psy10063 792 -----NKATAGFLLSC---PDFLFDFDTTREVTTTSTKV---GKFDARFYHLIFE-----E-EFARIK--------GHFG 846 (894)
Q Consensus 792 -----~~~~~~~~~~~---~~~~fS~dg~~l~~as~d~~---g~~~I~vwd~~tg-----~-~l~~l~--------gH~~ 846 (894)
.+.+..+.... -.+.++|+++++++.....- ..-.|.|||+.+. . .+..+. ....
T Consensus 424 ~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 503 (567)
T 1qks_A 424 HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQP 503 (567)
T ss_dssp CTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCC
T ss_pred CccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCc
Confidence 55555544322 23668999999998763210 0115999999876 2 112221 1235
Q ss_pred CeeEEEEeeCCcEEEEec-----CCCcEEEEecCccccccccc
Q psy10063 847 PINSLAFHPDGKSYASGG-----EDGFVRLHTFDQAYFDYTFD 884 (894)
Q Consensus 847 ~V~~l~fSpdg~~LaS~s-----~Dg~V~vWdl~~~~~~~~~~ 884 (894)
.+..+.|++||++|..+. .++.|.|+|.++.+++..+.
T Consensus 504 ~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 504 RVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp EEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred ceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 688999999998776652 37999999999998877765
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.70 E-value=1.5e-15 Score=167.10 Aligned_cols=149 Identities=10% Similarity=-0.037 Sum_probs=98.1
Q ss_pred CCEEEEEEccCCCEEEEec---------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063 410 AKITSLLWGNLDQYIITGH---------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN 480 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs---------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~ 480 (894)
..|..++| ||++|+... .++.|++||+..++... + . .+.
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~-------------------------~~~ 62 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----E-------------------------NAT 62 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----E-------------------------SCE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----c-------------------------cCC
Confidence 45677777 888777642 25679999998876433 3 2 355
Q ss_pred EEEEecCCCEEEEEECC---C--CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCC----eE-E----Eec
Q psy10063 481 DMQFSKDATMFITASKD---H--TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEA----RE-V----TTT 546 (894)
Q Consensus 481 ~l~~spdg~~L~sgs~D---g--~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~----~~-v----~~~ 546 (894)
+++|+|||++|+.++.+ + .|.+||+..++......+.. +.+++|+|||++|++++.+.. .. + +..
T Consensus 63 ~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 63 MPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp EEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred CeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 56666666666655533 2 48888999888777766655 999999999999998874310 00 0 000
Q ss_pred cC----ccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC
Q psy10063 547 ST----KVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED 594 (894)
Q Consensus 547 ~~----~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D 594 (894)
+. ......|.+||+..++.+..+.. . .+..++|+||| +++++..+
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp --------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred cCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecc
Confidence 00 01123588999988877455544 3 78899999999 77776554
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.70 E-value=3.3e-15 Score=165.83 Aligned_cols=283 Identities=12% Similarity=-0.008 Sum_probs=181.4
Q ss_pred EEEEEecCCCCEEEEEEccCCCEEEEec----------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEE
Q psy10063 401 VKMQVTDQSAKITSLLWGNLDQYIITGH----------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITA 470 (894)
Q Consensus 401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs----------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~ 470 (894)
+...+..+... .++|+|||++|+++. .++.|.+||+.+++.+..+..... ... .+
T Consensus 43 ~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~-~~~------~g------ 107 (361)
T 2oiz_A 43 FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK-RVQ------GL------ 107 (361)
T ss_dssp EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT-BCC------BC------
T ss_pred EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc-ccc------cC------
Confidence 33445555444 899999999999886 356799999999998888764321 000 00
Q ss_pred eCCCCccceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEE-EeCCCCeeEEEEcCCC-CEEEEEECCCCeEEEec
Q psy10063 471 SHSQAVEPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKT-YTTERPVNSAALSPIL-PHVVLGGGQEAREVTTT 546 (894)
Q Consensus 471 ~~d~~i~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~-~~~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~ 546 (894)
.....|+|+|||++|+++.. ++.|.+||+.+++.+.. +.... ...+.+.|++ ..+++.+.++.+.
T Consensus 108 ------~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~~dg~~~---- 176 (361)
T 2oiz_A 108 ------NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTICGDGGLL---- 176 (361)
T ss_dssp ------CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEETTSSEE----
T ss_pred ------CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEECCCCcEE----
Confidence 14567888889998888764 57899999999998887 55433 2335677766 5677777777643
Q ss_pred cCccceeeEEEEeccc-cceE------EEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEE
Q psy10063 547 STKVGKFDARFYHLIF-EEEF------ARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQ 619 (894)
Q Consensus 547 ~~~~~~~~v~vwd~~~-~~~~------~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~ 619 (894)
+|++.. ++.. ..+..+...+ .+.+++++..++..+.++.|.+||+......
T Consensus 177 ----------~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~----------- 234 (361)
T 2oiz_A 177 ----------TINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVK----------- 234 (361)
T ss_dssp ----------EEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCE-----------
T ss_pred ----------EEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCce-----------
Confidence 333322 2222 1112222222 3344677777777778888888887543210
Q ss_pred CcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEecc
Q psy10063 620 QPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTK 699 (894)
Q Consensus 620 spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~ 699 (894)
+ +..+.. .......
T Consensus 235 ------~------~~~~~~---------------------------~~~~~~~--------------------------- 248 (361)
T 2oiz_A 235 ------V------DGPWSL---------------------------LNDEDKA--------------------------- 248 (361)
T ss_dssp ------E------EEEEES---------------------------CCHHHHH---------------------------
T ss_pred ------e------cccccc---------------------------cCccccc---------------------------
Confidence 0 000000 0000000
Q ss_pred CcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEec
Q psy10063 700 DEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALAL 779 (894)
Q Consensus 700 ~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs 779 (894)
..+.+.+ ...++|+|++++|+++.
T Consensus 249 --------------------------------------------~~~~p~g------------~~~~a~~~dg~~lyv~~ 272 (361)
T 2oiz_A 249 --------------------------------------------KNWVPGG------------YNLVGLHRASGRMYVFM 272 (361)
T ss_dssp --------------------------------------------TTCEECC------------SSCEEEETTTTEEEEEE
T ss_pred --------------------------------------------cccccCC------------eeEEEEecCCCeEEEEE
Confidence 0000000 01246778877776653
Q ss_pred C-----------CCcEEEEEccCCceeeccccC-CCceEeecCCCeEEEEecCCCCceeEEEeecCCc--ceeeeccCCC
Q psy10063 780 A-----------DKVSERYRDRKNKATAGFLLS-CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE--EEFARIKGHF 845 (894)
Q Consensus 780 ~-----------Dg~I~iwd~~~~~~~~~~~~~-~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg--~~l~~l~gH~ 845 (894)
. ...|.+||+.+++.+..+..+ ...++|++||++|+++.. + .|.|||.+++ +++..+..+.
T Consensus 273 ~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~p~~ia~spdg~~l~v~n~-~----~v~v~D~~t~~l~~~~~i~~~G 347 (361)
T 2oiz_A 273 HPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRDALSMTIDQQRNLMLTLDG-G----NVNVYDISQPEPKLLRTIEGAA 347 (361)
T ss_dssp ESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTTCCEEEEETTTTEEEEECS-S----CEEEEECSSSSCEEEEEETTSC
T ss_pred ccCCCcccccCCCceEEEEECCCCcEEEEEecCCeeEEEECCCCCEEEEeCC-C----eEEEEECCCCcceeeEEeccCC
Confidence 3 347999999999887655432 667889999999988775 3 6999999999 9999987777
Q ss_pred CCeeEEEEeeCCc
Q psy10063 846 GPINSLAFHPDGK 858 (894)
Q Consensus 846 ~~V~~l~fSpdg~ 858 (894)
.....|+|+|||+
T Consensus 348 ~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 348 EASLQVQFHPVGG 360 (361)
T ss_dssp SSEEEEEECCCSC
T ss_pred CCcEEEEecCCCC
Confidence 8888999999986
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.68 E-value=4.2e-15 Score=162.59 Aligned_cols=142 Identities=9% Similarity=0.088 Sum_probs=107.6
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC
Q psy10063 409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA 488 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg 488 (894)
...|.+++|++++..|+..+.++.+++| .++.+..+..+.. .+.+++|+++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------------------------~~~~~~~~~~g 56 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGL-------------------------QLEGLNFDRQG 56 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCC-------------------------CEEEEEECTTS
T ss_pred ccccceeeecCCccceeEEeecccCccc---ccceeEEEeccCc-------------------------cccCcEECCCC
Confidence 3457888999998888877888899999 3666677766655 56788888888
Q ss_pred CEEEEEECCCCEEEEEcCCCcEEEEE-eCCCCeeEEEEcCCCCEEEEEECC----CCeEEEeccCccceeeEEEEecccc
Q psy10063 489 TMFITASKDHTAKLFTTHDRQLLKTY-TTERPVNSAALSPILPHVVLGGGQ----EAREVTTTSTKVGKFDARFYHLIFE 563 (894)
Q Consensus 489 ~~L~sgs~Dg~V~iwdl~~~~~~~~~-~~~~~v~~l~~spdg~~l~~~~~~----~~~~v~~~~~~~~~~~v~vwd~~~~ 563 (894)
++++++..++.|++||...++....+ .....+.+++|+++|+++++...+ +. |.+||...+
T Consensus 57 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~--------------i~~~d~~~~ 122 (333)
T 2dg1_A 57 QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG--------------IFAATENGD 122 (333)
T ss_dssp CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCE--------------EEEECTTSC
T ss_pred CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCce--------------EEEEeCCCC
Confidence 87778888899999999988877655 346789999999999877766554 22 778887766
Q ss_pred ceEEEcc--CCCCCeEEEEEecCCCEEEEEe
Q psy10063 564 EEFARIK--GHFGPINSLAFHPDGKSYASGG 592 (894)
Q Consensus 564 ~~~~~l~--~h~~~V~~l~~spdg~~l~sgs 592 (894)
+....+. .+...+.+++++++|+++++..
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 123 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp SCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred EEEEEEccCccCCcccceEECCCCCEEEEec
Confidence 6543332 2445789999999998777654
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.68 E-value=2e-14 Score=153.64 Aligned_cols=161 Identities=9% Similarity=0.109 Sum_probs=116.9
Q ss_pred cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe-
Q psy10063 407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS- 485 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s- 485 (894)
+|-..+.+|+++++|+++++...++.|++||.. ++.+..+..... ..+....+.+|++.
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~-------------------~~~~~~~p~~i~~~~ 86 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGK-------------------RDSQLLYPNRVAVVR 86 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSS-------------------STTCBSSEEEEEEET
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCC-------------------CcccccCceEEEEEc
Confidence 566789999999999988888889999999987 666666643210 01112257788884
Q ss_pred cCCCEEEEEEC-CCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063 486 KDATMFITASK-DHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF 562 (894)
Q Consensus 486 pdg~~L~sgs~-Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~ 562 (894)
+++.++++... ++.|++|| .+++.+..+.. ...+.+++++++|+.+++...++. |++||..
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~--------------i~~~~~~- 150 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMR--------------VIIFDQN- 150 (286)
T ss_dssp TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTE--------------EEEECTT-
T ss_pred CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCE--------------EEEEcCC-
Confidence 56666655533 78999999 67887777754 357899999999986665555554 6777754
Q ss_pred cceEEEcc--CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063 563 EEEFARIK--GHFGPINSLAFHPDGKSYASGGEDGFLISNTLS 603 (894)
Q Consensus 563 ~~~~~~l~--~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~ 603 (894)
++.+..+. ++...+.+|+++++|+++++...++.|++|+..
T Consensus 151 g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 151 GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC
Confidence 55555443 455678999999999988877778999999863
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.65 E-value=2e-14 Score=157.41 Aligned_cols=229 Identities=10% Similarity=0.088 Sum_probs=155.0
Q ss_pred CCEEEEEcCCCcEEEEEeCC--CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc-eEEEc-----
Q psy10063 498 HTAKLFTTHDRQLLKTYTTE--RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE-EFARI----- 569 (894)
Q Consensus 498 g~V~iwdl~~~~~~~~~~~~--~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~-~~~~l----- 569 (894)
+.|.+||..+++++..+... ..+..|+|+++|+++++...++. |++|+..... .+..+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~--------------v~~~~~~g~~~~~~~~~~~~~ 134 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQ--------------VFKLDPHSKEGPLLILGRSMQ 134 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTE--------------EEEECTTCSSCCSEEESBTTB
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCE--------------EEEEeCCCCeEEEEEecccCC
Confidence 68999999999988777632 57899999999996666555554 6777765332 34444
Q ss_pred ----cCCCCCeEEEEEec-CCCEEEEEe-CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC
Q psy10063 570 ----KGHFGPINSLAFHP-DGKSYASGG-EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS 643 (894)
Q Consensus 570 ----~~h~~~V~~l~~sp-dg~~l~sgs-~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~ 643 (894)
.++.....+|+|++ +|.++++.+ .++.|++|+.+.. ++ ..+...
T Consensus 135 ~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~-------------------~~-------~~~~~~---- 184 (329)
T 3fvz_A 135 PGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK-------------------FV-------TQWGEE---- 184 (329)
T ss_dssp CCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC-------------------EE-------EEECEE----
T ss_pred CCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC-------------------EE-------EEeccC----
Confidence 34555789999999 788888776 6889999984321 10 000000
Q ss_pred CCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecc
Q psy10063 644 TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNP 723 (894)
Q Consensus 644 ~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~ 723 (894)
+. +
T Consensus 185 --------g~--------------------------------------------------------------~------- 187 (329)
T 3fvz_A 185 --------SS--------------------------------------------------------------G------- 187 (329)
T ss_dssp --------CC--------------------------------------------------------------S-------
T ss_pred --------CC--------------------------------------------------------------C-------
Confidence 00 0
Q ss_pred cCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCCceeecccc--
Q psy10063 724 FDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKNKATAGFLL-- 800 (894)
Q Consensus 724 ~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~~~~~~~~-- 800 (894)
. ....++......|+++|+ +.++++...++.|++|+..+++.+..+..
T Consensus 188 -------------------------~----~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~ 238 (329)
T 3fvz_A 188 -------------------------S----SPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS 238 (329)
T ss_dssp -------------------------S----SCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT
T ss_pred -------------------------C----CCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc
Confidence 0 000011123568899998 77778888899999999987777655432
Q ss_pred ---CCCceEeecCCCeEEEEecC---CCCceeEEEeecCCcceeeec---cCCCCCeeEEEEeeCCcEEEEecCCCcEEE
Q psy10063 801 ---SCPDFLFDFDTTREVTTTST---KVGKFDARFYHLIFEEEFARI---KGHFGPINSLAFHPDGKSYASGGEDGFVRL 871 (894)
Q Consensus 801 ---~~~~~~fS~dg~~l~~as~d---~~g~~~I~vwd~~tg~~l~~l---~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~v 871 (894)
....++|+| +..++..+.. ..+...|++|++..|+++..+ .+|...+.+|+|++||.++++...++.|++
T Consensus 239 ~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~ 317 (329)
T 3fvz_A 239 FGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWK 317 (329)
T ss_dssp TTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEE
T ss_pred cCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEE
Confidence 233566777 3222222111 011225999999999999887 478888999999999999999999999999
Q ss_pred EecCcc
Q psy10063 872 HTFDQA 877 (894)
Q Consensus 872 Wdl~~~ 877 (894)
|+++..
T Consensus 318 ~~~~~~ 323 (329)
T 3fvz_A 318 FTLTEK 323 (329)
T ss_dssp EEEEEC
T ss_pred EeCCcc
Confidence 999754
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.64 E-value=2.7e-14 Score=173.45 Aligned_cols=127 Identities=12% Similarity=0.021 Sum_probs=86.2
Q ss_pred ceEEEEEecCCCEEEEEECCC-----CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEE--EeccCcc
Q psy10063 478 PINDMQFSKDATMFITASKDH-----TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREV--TTTSTKV 550 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg-----~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v--~~~~~~~ 550 (894)
.+..++|||||++||.++.++ .|+|||+.+++.+........+.+++|+|||+.|+++..++.-.- -......
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 466778888888887765433 899999999998775443344778999999999999987653000 0000001
Q ss_pred ceeeEEEEeccccc----eEEEccCCCCCeEEEEEecCCCEEEEEeC-----CCcEEEEECCC
Q psy10063 551 GKFDARFYHLIFEE----EFARIKGHFGPINSLAFHPDGKSYASGGE-----DGFLISNTLSN 604 (894)
Q Consensus 551 ~~~~v~vwd~~~~~----~~~~l~~h~~~V~~l~~spdg~~l~sgs~-----Dg~I~vwdl~~ 604 (894)
....|++|++.+++ .+.....|...+.++.|+|||++|+.++. +..|++||+..
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 12348889988765 22233335667889999999999887764 45677777643
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.60 E-value=1.3e-13 Score=167.43 Aligned_cols=177 Identities=12% Similarity=0.088 Sum_probs=108.5
Q ss_pred CCCCEEEEEEccCCCEEEEecCCC-----cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063 408 QSAKITSLLWGNLDQYIITGHAKG-----DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM 482 (894)
Q Consensus 408 H~~~V~~l~~spdg~~L~sgs~Dg-----~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l 482 (894)
|...+.+++|||||++||.+..++ .|+|||+.+|+.+.....+. .+..++|+|||+.|++++.++.-...
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~--~~~~~~wspDg~~l~~~~~~~~~~~~--- 197 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV--KFSCMAWTHDGKGMFYNAYPQQDGKS--- 197 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE--CSCCEEECTTSSEEEEEECCCCSSCC---
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc--ccceEEEEeCCCEEEEEEECCccccc---
Confidence 444688999999999998775433 89999999998776433222 23445555555555554443221000
Q ss_pred EEecCCCEEEEEECCCCEEEEEcCCCcE--EEEEeC---CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063 483 QFSKDATMFITASKDHTAKLFTTHDRQL--LKTYTT---ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF 557 (894)
Q Consensus 483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~--~~~~~~---~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v 557 (894)
++.. -.......|++|++.+++. ...+.. ...+..++|+|||++|++.+..+.- ...+|++
T Consensus 198 ----~~~~-~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~---------~~~~l~~ 263 (710)
T 2xdw_A 198 ----DGTE-TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD---------PVNRLWY 263 (710)
T ss_dssp ----SSSC-CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS---------SCCEEEE
T ss_pred ----cccc-cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC---------CccEEEE
Confidence 0000 0001123499999988763 233332 3457899999999999988753310 0123888
Q ss_pred Eeccc------cc-eEEEccCCCCCeEEEEEecCCCEEEEEeCCC----cEEEEECCC
Q psy10063 558 YHLIF------EE-EFARIKGHFGPINSLAFHPDGKSYASGGEDG----FLISNTLSN 604 (894)
Q Consensus 558 wd~~~------~~-~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg----~I~vwdl~~ 604 (894)
||+.. +. .+..+..+...+.. .|+++|+.|+..+.++ .|.+|++..
T Consensus 264 ~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 320 (710)
T 2xdw_A 264 CDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTD 320 (710)
T ss_dssp EEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred EECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 99876 43 45666667666655 4888988877665432 477777654
No 179
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.60 E-value=1.9e-12 Score=143.88 Aligned_cols=145 Identities=12% Similarity=0.028 Sum_probs=100.8
Q ss_pred EEccCCCEEEEecC--CC---cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCE
Q psy10063 416 LWGNLDQYIITGHA--KG---DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATM 490 (894)
Q Consensus 416 ~~spdg~~L~sgs~--Dg---~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~ 490 (894)
...|+++++++... .. .|.+||..+++.+..+..... + .++|+|||++
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~-------------------------p--~i~~spDg~~ 79 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL-------------------------P--NPVAAHSGSE 79 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCC-------------------------C--CeEECCCCCE
Confidence 34467777777653 22 789999999999888775443 1 4455555555
Q ss_pred EEEEE----------CCCCEEEEEcCCCcEEEEEeCC--------CCeeEEEEcCCCCEEEEEECC-CCeEEEeccCccc
Q psy10063 491 FITAS----------KDHTAKLFTTHDRQLLKTYTTE--------RPVNSAALSPILPHVVLGGGQ-EAREVTTTSTKVG 551 (894)
Q Consensus 491 L~sgs----------~Dg~V~iwdl~~~~~~~~~~~~--------~~v~~l~~spdg~~l~~~~~~-~~~~v~~~~~~~~ 551 (894)
|+.+. .++.|.+||..+++.+..+... .....++|+|||++|+++... ..
T Consensus 80 lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~----------- 148 (373)
T 2mad_H 80 FALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP----------- 148 (373)
T ss_pred EEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCC-----------
Confidence 55543 3678999999999888877643 345689999999999998753 22
Q ss_pred eeeEEEEeccccceEEE-ccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCc
Q psy10063 552 KFDARFYHLIFEEEFAR-IKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 552 ~~~v~vwd~~~~~~~~~-l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
.|.++| .+++.+.. +... + |+.+.+++ +.+++.+.||.+.+|++ .++
T Consensus 149 --~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 149 --AVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred --eEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 178889 88888877 5432 1 24455655 45666778999999988 543
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.59 E-value=3.9e-13 Score=144.40 Aligned_cols=170 Identities=11% Similarity=-0.022 Sum_probs=116.6
Q ss_pred EecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063 405 VTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ 483 (894)
Q Consensus 405 l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~ 483 (894)
+..+.....+++|+|+|+ +++++..++.|++||...+ +..+..+.. .+.+|+
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~-------------------------~~~~l~ 75 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSH-------------------------HQNGHC 75 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCS-------------------------SEEEEE
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCC-------------------------Ccceee
Confidence 345677889999999998 7888888999999999877 555555544 577888
Q ss_pred EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-----CCCeeEEEEcCCCCEEEEEECCCCeEEE---eccCccceeeE
Q psy10063 484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-----ERPVNSAALSPILPHVVLGGGQEAREVT---TTSTKVGKFDA 555 (894)
Q Consensus 484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-----~~~v~~l~~spdg~~l~~~~~~~~~~v~---~~~~~~~~~~v 555 (894)
|+++|+++++...++.|.+||..+++....... ...+..++++++|+++++....+....+ ......+...|
T Consensus 76 ~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l 155 (296)
T 3e5z_A 76 LNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWV 155 (296)
T ss_dssp ECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEE
T ss_pred ECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEE
Confidence 888888777776678999999988886654432 2356789999999877763211100000 00000000014
Q ss_pred EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063 556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS 603 (894)
Q Consensus 556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~ 603 (894)
..++.. ++ +..+..+......++|+|||++|++...++.|++|+++
T Consensus 156 ~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 156 FRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp EEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 445544 33 34445666778999999999988777778899999875
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.59 E-value=6.4e-12 Score=146.89 Aligned_cols=160 Identities=9% Similarity=0.039 Sum_probs=118.8
Q ss_pred CCCCEEEEEEccCCCEEEEecCCCcEEEEecC--CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063 408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLR--MGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS 485 (894)
Q Consensus 408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~--tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s 485 (894)
....+.+++|+|||++|++++.|+.|.+||+. +++.+..+.... ....|+|+
T Consensus 195 ~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~--------------------------~P~~ia~s 248 (567)
T 1qks_A 195 TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS--------------------------EARSIETS 248 (567)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS--------------------------EEEEEEEC
T ss_pred CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC--------------------------CCceeEEc
Confidence 34467899999999999999999999999995 788888777543 35677788
Q ss_pred ----cCCCEEEEEEC-CCCEEEEEcCCCcEEEEEeCC------------CCeeEEEEcCCCCEEEEEECCCCeEEEeccC
Q psy10063 486 ----KDATMFITASK-DHTAKLFTTHDRQLLKTYTTE------------RPVNSAALSPILPHVVLGGGQEAREVTTTST 548 (894)
Q Consensus 486 ----pdg~~L~sgs~-Dg~V~iwdl~~~~~~~~~~~~------------~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~ 548 (894)
|||++|+++.+ ++.|.|||..+.++++.+... ..+..+.+++++..+++...+...
T Consensus 249 ~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~------- 321 (567)
T 1qks_A 249 KMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK------- 321 (567)
T ss_dssp CSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE-------
T ss_pred cccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe-------
Confidence 58887776654 589999999999999887632 257888999988877776655432
Q ss_pred ccceeeEEEEeccccceEEEc-cCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCc
Q psy10063 549 KVGKFDARFYHLIFEEEFARI-KGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGL 606 (894)
Q Consensus 549 ~~~~~~v~vwd~~~~~~~~~l-~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~ 606 (894)
|.++|+...+.+... ........++.|+++|++|+++. .++.|.+||+.+++
T Consensus 322 ------v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k 375 (567)
T 1qks_A 322 ------ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK 375 (567)
T ss_dssp ------EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred ------EEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 666666544322211 12334577899999999887665 57889999998765
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.58 E-value=3.6e-13 Score=147.29 Aligned_cols=265 Identities=9% Similarity=-0.023 Sum_probs=179.6
Q ss_pred CCCcEEEEecCCCeEEEEecCC--CCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcC
Q psy10063 429 AKGDICTWDLRMGRELESISGH--AKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH 506 (894)
Q Consensus 429 ~Dg~I~iWd~~tg~~~~~l~~h--~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~ 506 (894)
.++.|.+||.++++.++.+... .. .+ | .....|++. +++++++...++.|.+||.+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~-~l--------g------------~~~~~i~~~-~~~lyv~~~~~~~v~viD~~ 72 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGF-KL--------G------------DVAQSMVIR-DGIGWIVVNNSHVIFAIDIN 72 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSS-CC--------B------------SCEEEEEEE-TTEEEEEEGGGTEEEEEETT
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCc-cc--------C------------ccceEEEEE-CCEEEEEEcCCCEEEEEECc
Confidence 4789999999999876554210 00 00 0 035566664 34555556667899999999
Q ss_pred CCcEEEEEeCCCCeeEEEEcCCCCEEEEEE-CCCCeEEEeccCccceeeEEEEeccccceEEEccCCC-----CCeEEEE
Q psy10063 507 DRQLLKTYTTERPVNSAALSPILPHVVLGG-GQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF-----GPINSLA 580 (894)
Q Consensus 507 ~~~~~~~~~~~~~v~~l~~spdg~~l~~~~-~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~-----~~V~~l~ 580 (894)
+++++..+........+++++++ +|+++. .++. |.+||..+++.+..+.... .....|+
T Consensus 73 t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~--------------v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~ 137 (328)
T 3dsm_A 73 TFKEVGRITGFTSPRYIHFLSDE-KAYVTQIWDYR--------------IFIINPKTYEITGYIECPDMDMESGSTEQMV 137 (328)
T ss_dssp TCCEEEEEECCSSEEEEEEEETT-EEEEEEBSCSE--------------EEEEETTTTEEEEEEECTTCCTTTCBCCCEE
T ss_pred ccEEEEEcCCCCCCcEEEEeCCC-eEEEEECCCCe--------------EEEEECCCCeEEEEEEcCCccccCCCcceEE
Confidence 99999999877889999999998 666666 5554 8889999888776665332 1456777
Q ss_pred EecCCCEEEEEe--CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCC
Q psy10063 581 FHPDGKSYASGG--EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDS 658 (894)
Q Consensus 581 ~spdg~~l~sgs--~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~ 658 (894)
+ ++..|+.+. .++.|.+||+++++.+. .+..
T Consensus 138 ~--~~~~lyv~~~~~~~~v~viD~~t~~~~~-------------------------~i~~-------------------- 170 (328)
T 3dsm_A 138 Q--YGKYVYVNCWSYQNRILKIDTETDKVVD-------------------------ELTI-------------------- 170 (328)
T ss_dssp E--ETTEEEEEECTTCCEEEEEETTTTEEEE-------------------------EEEC--------------------
T ss_pred E--ECCEEEEEcCCCCCEEEEEECCCCeEEE-------------------------EEEc--------------------
Confidence 7 344455444 47889999987653210 0000
Q ss_pred ceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceee
Q psy10063 659 GVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTW 738 (894)
Q Consensus 659 ~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~ 738 (894)
T Consensus 171 -------------------------------------------------------------------------------- 170 (328)
T 3dsm_A 171 -------------------------------------------------------------------------------- 170 (328)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCC----------CcEEEEEccCCceeecccc----CCCc
Q psy10063 739 GHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALAD----------KVSERYRDRKNKATAGFLL----SCPD 804 (894)
Q Consensus 739 ~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~D----------g~I~iwd~~~~~~~~~~~~----~~~~ 804 (894)
......++++++|++++++..+ +.|.+||..+++....+.. ....
T Consensus 171 ---------------------g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~ 229 (328)
T 3dsm_A 171 ---------------------GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSE 229 (328)
T ss_dssp ---------------------SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEE
T ss_pred ---------------------CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCcee
Confidence 0001234455666655555443 6799999888776654433 3457
Q ss_pred eEeecCCCeEEEEecCCCCceeEEEeecCCcceeee--ccCCCCCeeEEEEee-CCcEEEEe----cCCCcEEEEecCcc
Q psy10063 805 FLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHP-DGKSYASG----GEDGFVRLHTFDQA 877 (894)
Q Consensus 805 ~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~--l~gH~~~V~~l~fSp-dg~~LaS~----s~Dg~V~vWdl~~~ 877 (894)
++|++|+++++++.. .|++||.++++.... +..+......|+++| +++++++. ..++.|.+|+.+ +
T Consensus 230 la~~~d~~~lyv~~~------~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g 302 (328)
T 3dsm_A 230 VQLNGTRDTLYWINN------DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G 302 (328)
T ss_dssp EEECTTSCEEEEESS------SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-C
T ss_pred EEEecCCCEEEEEcc------EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-C
Confidence 889999999988765 389999998876432 222346788999999 56666776 678999999998 7
Q ss_pred cccccccc
Q psy10063 878 YFDYTFDI 885 (894)
Q Consensus 878 ~~~~~~~~ 885 (894)
+++..+..
T Consensus 303 ~~~~~i~~ 310 (328)
T 3dsm_A 303 KLIDEFYV 310 (328)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEe
Confidence 77777754
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.58 E-value=1.2e-13 Score=151.84 Aligned_cols=111 Identities=11% Similarity=-0.058 Sum_probs=73.6
Q ss_pred ceEEEeeCCCCCEEEEecCCC-------cEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCC----CceeEEEe
Q psy10063 762 IGFKMPEPPKREKLALALADK-------VSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKV----GKFDARFY 830 (894)
Q Consensus 762 ~v~~la~spdg~~Latgs~Dg-------~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~----g~~~I~vw 830 (894)
.+..++|+||| +++++..++ ...||.+..++. ..+........++|||++|+.++.+.. ....|++|
T Consensus 172 ~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~ 249 (347)
T 2gop_A 172 RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIY 249 (347)
T ss_dssp TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEE
T ss_pred CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccCcceeeECCCCCEEEEEEccccCCccccceEEEE
Confidence 35577888888 666665442 345554443322 222111233345999999988876542 12368888
Q ss_pred ecCCcceeeeccCCCCCeeE-EEEeeCCcEEEEecCCCcEEEEecCcccc
Q psy10063 831 HLIFEEEFARIKGHFGPINS-LAFHPDGKSYASGGEDGFVRLHTFDQAYF 879 (894)
Q Consensus 831 d~~tg~~l~~l~gH~~~V~~-l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~ 879 (894)
| .++....+.+|...|.. +.|+ || ++++++.|+.++|| +..++.
T Consensus 250 d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 250 D--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI 294 (347)
T ss_dssp C--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE
T ss_pred C--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce
Confidence 8 66666556677888886 9999 98 99999999999999 874443
No 184
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.58 E-value=4.8e-13 Score=146.30 Aligned_cols=161 Identities=14% Similarity=0.203 Sum_probs=122.4
Q ss_pred CCCEEEEEEccCCCEEEEecCC------------------------CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCC
Q psy10063 409 SAKITSLLWGNLDQYIITGHAK------------------------GDICTWDLRMGRELESISGHAKEPINDMQFSKDA 464 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sgs~D------------------------g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg 464 (894)
-+.|.+|+|+++|+++++...+ +.|++||..+|+.+..+.......+..|+|+++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3668888888888888777666 4799999999998877653332278999999999
Q ss_pred CEEEEEeCCCCc----------------------------cceEEEEEec-CCCEEEEEE-CCCCEEEEEcCCCcEEEEE
Q psy10063 465 TMFITASHSQAV----------------------------EPINDMQFSK-DATMFITAS-KDHTAKLFTTHDRQLLKTY 514 (894)
Q Consensus 465 ~~la~~~~d~~i----------------------------~~V~~l~~sp-dg~~L~sgs-~Dg~V~iwdl~~~~~~~~~ 514 (894)
+++++...++.+ ....+|+|+| +|.++++.+ .++.|++|| .+++.+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 977766544332 1477899999 788888876 689999999 678887777
Q ss_pred eCC-----------CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc--CCCCCeEEEEE
Q psy10063 515 TTE-----------RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK--GHFGPINSLAF 581 (894)
Q Consensus 515 ~~~-----------~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~--~h~~~V~~l~~ 581 (894)
... .....|+|++++..|+++...... |++|+..+++.+..+. .+...+.+++|
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~-------------I~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 248 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR-------------IQCFKTDTKEFVREIKHASFGRNVFAISY 248 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE-------------EEEEETTTCCEEEEECCTTTTTCEEEEEE
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE-------------EEEEECCCCcEEEEEeccccCCCcceeee
Confidence 531 238899999996666666554432 8999998888888773 46678899999
Q ss_pred ec
Q psy10063 582 HP 583 (894)
Q Consensus 582 sp 583 (894)
+|
T Consensus 249 ~p 250 (329)
T 3fvz_A 249 IP 250 (329)
T ss_dssp ET
T ss_pred cC
Confidence 98
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.58 E-value=9.8e-14 Score=168.07 Aligned_cols=161 Identities=7% Similarity=-0.061 Sum_probs=104.7
Q ss_pred cCCCCEEEEEEccCCCEEE-----EecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063 407 DQSAKITSLLWGNLDQYII-----TGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND 481 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~-----sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~ 481 (894)
+|...+.+++|||||++|| .|+.+..|+|||+.+|+.+. ..+.. .+ ....
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~-~~----------------------~~~~ 172 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIE-GG----------------------KYAT 172 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBS-CC----------------------TTCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccC-cc----------------------cccc
Confidence 4555799999999999998 44556789999999988641 11111 01 1145
Q ss_pred EEEecCCCEEEEEECCCC-------------EEEEEcCCCcE--EEEEeC---CCCeeEEEEcCCCCEEEEEECCCCeEE
Q psy10063 482 MQFSKDATMFITASKDHT-------------AKLFTTHDRQL--LKTYTT---ERPVNSAALSPILPHVVLGGGQEAREV 543 (894)
Q Consensus 482 l~~spdg~~L~sgs~Dg~-------------V~iwdl~~~~~--~~~~~~---~~~v~~l~~spdg~~l~~~~~~~~~~v 543 (894)
++|+|||+.|+.++.|.. |++|++.+++. ...+.. ...+.+++|+|||++|++.+.++.
T Consensus 173 ~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~--- 249 (695)
T 2bkl_A 173 PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW--- 249 (695)
T ss_dssp CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT---
T ss_pred eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC---
Confidence 667777777777766654 99999998762 233332 257889999999999998876551
Q ss_pred EeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe---CCCcEEEEECCC
Q psy10063 544 TTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG---EDGFLISNTLSN 604 (894)
Q Consensus 544 ~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs---~Dg~I~vwdl~~ 604 (894)
...+|++|+...++ +..+..+...+....| ++|++++... .++.|.+|+++.
T Consensus 250 -------~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~ 304 (695)
T 2bkl_A 250 -------SENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAK 304 (695)
T ss_dssp -------TEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTB
T ss_pred -------CceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCC
Confidence 01136667665554 3444556666667767 5666444433 246677777654
No 186
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.57 E-value=1.9e-13 Score=164.47 Aligned_cols=289 Identities=10% Similarity=-0.031 Sum_probs=166.9
Q ss_pred ceEEEEEecCCCEEEEE--ECCCCEEEEEcCCCcEEEEEe-CCCCee---------EEEEc--CCCCE-EEEEECCCCeE
Q psy10063 478 PINDMQFSKDATMFITA--SKDHTAKLFTTHDRQLLKTYT-TERPVN---------SAALS--PILPH-VVLGGGQEARE 542 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sg--s~Dg~V~iwdl~~~~~~~~~~-~~~~v~---------~l~~s--pdg~~-l~~~~~~~~~~ 542 (894)
.|.+++|++++.+++.. +.++...||....+...+.+. +...+. .++|+ |||++ |+++.....
T Consensus 25 ~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~-- 102 (662)
T 3azo_A 25 RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQ-- 102 (662)
T ss_dssp CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTC--
T ss_pred ccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCC--
Confidence 57777888765556665 457889999865444444443 344445 56565 99999 777665321
Q ss_pred EEeccCccceeeEEEEecc--ccceEEEccC-----CCCCeEEEEEecCCCEEEEEeCC----------CcEEEEECCC-
Q psy10063 543 VTTTSTKVGKFDARFYHLI--FEEEFARIKG-----HFGPINSLAFHPDGKSYASGGED----------GFLISNTLSN- 604 (894)
Q Consensus 543 v~~~~~~~~~~~v~vwd~~--~~~~~~~l~~-----h~~~V~~l~~spdg~~l~sgs~D----------g~I~vwdl~~- 604 (894)
.|++|++. .......+.. |...+.+++|+|||++|++++.| ..|++|++..
T Consensus 103 -----------~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 171 (662)
T 3azo_A 103 -----------RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS 171 (662)
T ss_dssp -----------CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred -----------eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence 25666665 2033445555 66788999999999999998876 5799999987
Q ss_pred -----Ccc--cc--CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcc
Q psy10063 605 -----GLD--IS--EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRM 675 (894)
Q Consensus 605 -----~~~--~~--~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~ 675 (894)
++. +. ....+..++|+|||+.++... +.. ..... ....|.+|+
T Consensus 172 ~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~-----~~~-~~~~~-----------~~~~i~~~d----------- 223 (662)
T 3azo_A 172 AAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLA-----WDH-PRMPW-----------EGTELKTAR----------- 223 (662)
T ss_dssp TTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEE-----ECT-TCCTT-----------TCEEEEEEE-----------
T ss_pred ccccCCceeEEEecCCCcccCceECCCCCEEEEEE-----CCC-CCCCC-----------CCcEEEEEE-----------
Confidence 432 11 123455667777776552110 000 00000 001111111
Q ss_pred cccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccc-cCcccccCCCCcc
Q psy10063 676 SINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHI-EGTPFKLDGSDTP 754 (894)
Q Consensus 676 ~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~-~g~~~~~dg~~~~ 754 (894)
.. .+.. +....
T Consensus 224 ----------------------------------------------------------------~~~~g~~----~~~~~ 235 (662)
T 3azo_A 224 ----------------------------------------------------------------VTEDGRF----ADTRT 235 (662)
T ss_dssp ----------------------------------------------------------------ECTTSCE----EEEEE
T ss_pred ----------------------------------------------------------------ECCCCcc----cccEE
Confidence 10 0000 00111
Q ss_pred eecCCCCceEEEeeCCCCCEEEEecCCC--cEEEEEccCCceeecc--cc---------CCCceEeecCCCeEEEEecCC
Q psy10063 755 ILAGPVDIGFKMPEPPKREKLALALADK--VSERYRDRKNKATAGF--LL---------SCPDFLFDFDTTREVTTTSTK 821 (894)
Q Consensus 755 ~~~~h~~~v~~la~spdg~~Latgs~Dg--~I~iwd~~~~~~~~~~--~~---------~~~~~~fS~dg~~l~~as~d~ 821 (894)
+..+|...+..++|+|||++++++..++ .|++|++..++...-. .. +...++|+++++.++++.. +
T Consensus 236 l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~ 314 (662)
T 3azo_A 236 LLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G 314 (662)
T ss_dssp EEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S
T ss_pred eCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C
Confidence 2334456788999999999888888888 4555555455432211 11 1345778889888777765 3
Q ss_pred CCceeEEEeecCCcceeeeccCCCCCeeEE-EEeeCCcEEEEecCCCc--EEEEecCcccc
Q psy10063 822 VGKFDARFYHLIFEEEFARIKGHFGPINSL-AFHPDGKSYASGGEDGF--VRLHTFDQAYF 879 (894)
Q Consensus 822 ~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l-~fSpdg~~LaS~s~Dg~--V~vWdl~~~~~ 879 (894)
...|+++|+..++ +..+..|.+.|..+ +++.+.-++++++.+.. |++|++.++++
T Consensus 315 --~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 315 --AAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp --SCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred --ccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 2234444766555 67788888888777 44433334455566654 44555556554
No 187
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.57 E-value=1.2e-11 Score=132.05 Aligned_cols=280 Identities=10% Similarity=-0.019 Sum_probs=180.5
Q ss_pred EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEe-cCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063 403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESI-SGHAKEPINDMQFSKDATMFITASHSQAVEPIND 481 (894)
Q Consensus 403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l-~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~ 481 (894)
+.+..+...+.+|+++++|+++++...++.|.+||.. ++..... ..+.. .+.+
T Consensus 8 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~-------------------------~~~~ 61 (299)
T 2z2n_A 8 LNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDA-------------------------KVMC 61 (299)
T ss_dssp EECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTC-------------------------CEEE
T ss_pred EcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccC-------------------------ceee
Confidence 3455677899999999999988877768899999988 6543322 11222 5777
Q ss_pred EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe---CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063 482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY 558 (894)
Q Consensus 482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw 558 (894)
|++.++|.++++...++.|.+||.. ++. ..+. ....+.++++.++|.++++....+. |.+|
T Consensus 62 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~--------------i~~~ 125 (299)
T 2z2n_A 62 LTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNR--------------IGRI 125 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTE--------------EEEE
T ss_pred EEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCce--------------EEEE
Confidence 8888888877776667889999876 443 3333 2457899999999976665555554 6667
Q ss_pred eccccceEE-EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEe
Q psy10063 559 HLIFEEEFA-RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLS 637 (894)
Q Consensus 559 d~~~~~~~~-~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~ 637 (894)
|. .++... .+..+...+.+++++++|+++++...++.|.+|+. .++.. .+.
T Consensus 126 d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~--------------------------~~~ 177 (299)
T 2z2n_A 126 TD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT--------------------------EFK 177 (299)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE--------------------------EEE
T ss_pred CC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE--------------------------Eee
Confidence 76 343332 23334567899999999987776666677888876 22100 000
Q ss_pred cccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCC
Q psy10063 638 SHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGT 717 (894)
Q Consensus 638 ~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~ 717 (894)
T Consensus 178 -------------------------------------------------------------------------------- 177 (299)
T 2z2n_A 178 -------------------------------------------------------------------------------- 177 (299)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec
Q psy10063 718 RLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG 797 (894)
Q Consensus 718 ~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~ 797 (894)
+..+...+.+|++.+++.++++...++.|.+|+. .++....
T Consensus 178 --------------------------------------~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 178 --------------------------------------IPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEF 218 (299)
T ss_dssp --------------------------------------CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE
T ss_pred --------------------------------------CCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEE
Confidence 0001123456778888887777666788888987 5443221
Q ss_pred -cc---cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeee-ccCCCCCeeEEEEeeCCcEEEEecCCCcEEEE
Q psy10063 798 -FL---LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR-IKGHFGPINSLAFHPDGKSYASGGEDGFVRLH 872 (894)
Q Consensus 798 -~~---~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~-l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vW 872 (894)
.. .....++++++|...++....+ .|.+||.. ++.... +..+...+.+|++ ++|+++++.+ .+.|..+
T Consensus 219 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~----~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~ 291 (299)
T 2z2n_A 219 KIPTPNARPHAITAGAGIDLWFTEWGAN----KIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKL 291 (299)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTT----EEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEE
T ss_pred ECCCCCCCceeEEECCCCCEEEeccCCc----eEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEE
Confidence 11 2234577888887444433333 59999984 543322 3456678999999 9998877766 4567777
Q ss_pred ecCccc
Q psy10063 873 TFDQAY 878 (894)
Q Consensus 873 dl~~~~ 878 (894)
+.+.+.
T Consensus 292 ~~~~~~ 297 (299)
T 2z2n_A 292 TLIKDN 297 (299)
T ss_dssp EEC---
T ss_pred EcCccc
Confidence 776553
No 188
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.57 E-value=1.4e-12 Score=143.30 Aligned_cols=297 Identities=9% Similarity=-0.032 Sum_probs=190.7
Q ss_pred EEEccCCCEEEEecC-----CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063 415 LLWGNLDQYIITGHA-----KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT 489 (894)
Q Consensus 415 l~~spdg~~L~sgs~-----Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~ 489 (894)
....|++++|+.... ++.|.++|..+++.+..+..... + .++++|||++|+++.. +.+.+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~-P--~va~spDG~~lyVan~-----------~~~r~- 102 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL-P--NPVVADDGSFIAHAST-----------VFSRI- 102 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS-C--EEEECTTSSCEEEEEE-----------EEEET-
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC-C--cEEECCCCCEEEEEcc-----------ccccc-
Confidence 344678887777654 57999999999999999886554 2 2555555444332210 00000
Q ss_pred EEEEEECCCCEEEEEcCCCcEEEEEeCC--------CCeeEEEEcCCCCEEEEEECC--CCeEEEeccCccceeeEEEEe
Q psy10063 490 MFITASKDHTAKLFTTHDRQLLKTYTTE--------RPVNSAALSPILPHVVLGGGQ--EAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~--------~~v~~l~~spdg~~l~~~~~~--~~~~v~~~~~~~~~~~v~vwd 559 (894)
.-|..++.|.+||..+++.+..+... .....++|+|||++|+++... +. |.++|
T Consensus 103 --~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~--------------VsVID 166 (386)
T 3sjl_D 103 --ARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA--------------VGVVD 166 (386)
T ss_dssp --TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE--------------EEEEE
T ss_pred --ccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe--------------EEEEE
Confidence 01224678999999999999888642 256789999999999998753 33 88999
Q ss_pred ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063 560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSH 639 (894)
Q Consensus 560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~ 639 (894)
+.+++.+..+.... . ...+....+.|++.+.||.+.+.++.....+ . ....
T Consensus 167 ~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v-----------------~--------~~~~- 217 (386)
T 3sjl_D 167 LEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP-----------------E--------ITHT- 217 (386)
T ss_dssp TTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCC-----------------E--------EEEC-
T ss_pred CCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeE-----------------E--------Eeec-
Confidence 99999988875321 1 2334334567788889999988887541100 0 0000
Q ss_pred cCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063 640 STSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL 719 (894)
Q Consensus 640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l 719 (894)
..
T Consensus 218 ~~------------------------------------------------------------------------------ 219 (386)
T 3sjl_D 218 EV------------------------------------------------------------------------------ 219 (386)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ce------------------------------------------------------------------------------
Confidence 00
Q ss_pred EecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEee-CCCCCEEEEecCCCcEEEEEccCCc--eee
Q psy10063 720 HVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPE-PPKREKLALALADKVSERYRDRKNK--ATA 796 (894)
Q Consensus 720 ~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~-spdg~~Latgs~Dg~I~iwd~~~~~--~~~ 796 (894)
+..+.. .++ ....| .++|++++ .+.+|.|++.|..... .+.
T Consensus 220 --------------------------~~~~~~--~~~-------~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~ 263 (386)
T 3sjl_D 220 --------------------------FHPEDE--FLI-------NHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLP 263 (386)
T ss_dssp --------------------------CSCTTS--CBC-------SCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECC
T ss_pred --------------------------eccccc--ccc-------ccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeec
Confidence 000000 000 00122 35665544 3446788888876543 222
Q ss_pred cc-------------ccCCCceEeecCCCeEEEEecCC------CCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCC
Q psy10063 797 GF-------------LLSCPDFLFDFDTTREVTTTSTK------VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDG 857 (894)
Q Consensus 797 ~~-------------~~~~~~~~fS~dg~~l~~as~d~------~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg 857 (894)
.+ ..+...+++++++++++++...+ ...-+|.++|+++++.++.+... ..+++|+|++|+
T Consensus 264 ~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~ 342 (386)
T 3sjl_D 264 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDE 342 (386)
T ss_dssp CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSS
T ss_pred ceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCC
Confidence 21 12344678899999999876421 11126999999999999888643 368899999999
Q ss_pred c-EEEE-ecCCCcEEEEecCccccccccccC
Q psy10063 858 K-SYAS-GGEDGFVRLHTFDQAYFDYTFDIS 886 (894)
Q Consensus 858 ~-~LaS-~s~Dg~V~vWdl~~~~~~~~~~~~ 886 (894)
+ +|++ ...++.|.|+|...++.+..++..
T Consensus 343 ~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 343 KPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp SCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred CeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 7 5555 567999999999999998887754
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.56 E-value=8.1e-14 Score=168.80 Aligned_cols=117 Identities=11% Similarity=0.016 Sum_probs=77.7
Q ss_pred ceEEEEEecCCCEEEE-----EECCCCEEEEEcCCCcEE-EEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063 478 PINDMQFSKDATMFIT-----ASKDHTAKLFTTHDRQLL-KTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG 551 (894)
Q Consensus 478 ~V~~l~~spdg~~L~s-----gs~Dg~V~iwdl~~~~~~-~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~ 551 (894)
.+.+++|||||++||. |+.+..|++||+.+++.+ ...........++|+|||+.|++++.+....- .......
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~-~~~~~~~ 200 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSI-KVDERPG 200 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTS-CGGGGGG
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCC-ccccCCC
Confidence 4666777777777763 344568999999999875 21111222378999999999999987652000 0000012
Q ss_pred eeeEEEEeccccc----eEEEccCCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063 552 KFDARFYHLIFEE----EFARIKGHFGPINSLAFHPDGKSYASGGEDG 595 (894)
Q Consensus 552 ~~~v~vwd~~~~~----~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg 595 (894)
..+|++|++.++. ++.....|...+.++.|+|||++|+.++.++
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence 3358899988765 3444445667889999999999988877655
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=1.1e-12 Score=138.45 Aligned_cols=154 Identities=6% Similarity=-0.029 Sum_probs=100.7
Q ss_pred CEEEEEEccCCCEEE-EecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063 411 KITSLLWGNLDQYII-TGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT 489 (894)
Q Consensus 411 ~V~~l~~spdg~~L~-sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~ 489 (894)
...+|+++++|++++ +...++.|.+||...+........+.. .+.+|+++++|+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------------------------~p~~i~~~~~g~ 79 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY-------------------------QPQGLAVDGAGT 79 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCC-------------------------SCCCEEECTTCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcC-------------------------CcceeEECCCCC
Confidence 788999999999777 546788999999765442221111111 467788888888
Q ss_pred EEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063 490 MFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR 568 (894)
Q Consensus 490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~ 568 (894)
++++.. ++.|++||............ ...+.+++++++|+.+++....+. |.+|+.........
T Consensus 80 l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~--------------i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 80 VYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNR--------------VVKLAAGSKTQTVL 144 (270)
T ss_dssp EEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTE--------------EEEECTTCCSCEEC
T ss_pred EEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCE--------------EEEEECCCceeEee
Confidence 665554 88899999876544322112 367899999999985555545554 55666544443332
Q ss_pred ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063 569 IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 569 l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~ 604 (894)
...+...+.+|+++++|+++++...++.|++|+.+.
T Consensus 145 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 145 PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 233344678899999998777766678888887643
No 191
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.54 E-value=2.7e-12 Score=136.96 Aligned_cols=180 Identities=12% Similarity=0.140 Sum_probs=135.0
Q ss_pred CCCCEEEEEE-ccCCCEEEEecC-CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc---------
Q psy10063 408 QSAKITSLLW-GNLDQYIITGHA-KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV--------- 476 (894)
Q Consensus 408 H~~~V~~l~~-spdg~~L~sgs~-Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i--------- 476 (894)
|...+.+++| .++++++++... ++.|++|| ..++.+..+.......+.+|+++++|+++++...++.+
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 153 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNV 153 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCE
Confidence 4467899999 477776666643 78999999 66887777754332378999999999877765544433
Q ss_pred ----------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC---CCeeEEEEcCCCCEEEEEECCC-CeE
Q psy10063 477 ----------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE---RPVNSAALSPILPHVVLGGGQE-ARE 542 (894)
Q Consensus 477 ----------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~---~~v~~l~~spdg~~l~~~~~~~-~~~ 542 (894)
..+.+|+++++|+++++...++.|++||. .++.+..+... ..+.+|+++++|.++++...++ .
T Consensus 154 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~-- 230 (286)
T 1q7f_A 154 LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN-- 230 (286)
T ss_dssp EEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE--
T ss_pred EEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE--
Confidence 25788999999998888778899999997 56667667543 5789999999998777766554 4
Q ss_pred EEeccCccceeeEEEEeccccceEEEccCCCC--CeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063 543 VTTTSTKVGKFDARFYHLIFEEEFARIKGHFG--PINSLAFHPDGKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 543 v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~--~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~ 605 (894)
|++|+. .++.+..+..+.. .+.+++|+++|+++++ +.|+.|++|++...
T Consensus 231 ------------i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 231 ------------LTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ------------EEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred ------------EEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 777874 3566666654433 4789999999987666 67999999998653
No 192
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.52 E-value=6.2e-12 Score=137.24 Aligned_cols=168 Identities=12% Similarity=0.064 Sum_probs=115.8
Q ss_pred EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063 402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND 481 (894)
Q Consensus 402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~ 481 (894)
...+.+|...+.+++|+++|++++++..++.|++||...++....+..+.. .+.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------------------------~~~~ 91 (333)
T 2dg1_A 37 WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKA-------------------------NPAA 91 (333)
T ss_dssp EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSS-------------------------SEEE
T ss_pred eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCC-------------------------Ccce
Confidence 335667888899999999999888888899999999988876554433433 5777
Q ss_pred EEEecCCCEEEEEECC----CCEEEEEcCCCcEEEEEe---CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063 482 MQFSKDATMFITASKD----HTAKLFTTHDRQLLKTYT---TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD 554 (894)
Q Consensus 482 l~~spdg~~L~sgs~D----g~V~iwdl~~~~~~~~~~---~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~ 554 (894)
|+|+++|+++++...+ +.|.+||.+.++....+. ....+.+++++++|+++++...... ......
T Consensus 92 i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~--------~~~~~~ 163 (333)
T 2dg1_A 92 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYS--------TNPLGG 163 (333)
T ss_dssp EEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBT--------TBCCEE
T ss_pred EEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccc--------cCCCce
Confidence 7888888777766655 689999998877664443 2357899999999987665543100 000011
Q ss_pred EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECC
Q psy10063 555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLS 603 (894)
Q Consensus 555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~ 603 (894)
|..|+...++... +..+...+.+++|+++|++|+.+ ..++.|++|+++
T Consensus 164 l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 164 VYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp EEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 4555554443332 22333457899999999866544 457889999875
No 193
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.51 E-value=2.9e-12 Score=143.47 Aligned_cols=290 Identities=11% Similarity=-0.008 Sum_probs=182.6
Q ss_pred cCCCEEEEecC-C----CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063 419 NLDQYIITGHA-K----GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT 493 (894)
Q Consensus 419 pdg~~L~sgs~-D----g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s 493 (894)
+++++|+.... + +.|.++|+.+++.+..+..... + .++|+|||++|+++... +. +...
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~-P--gia~SpDgk~lyVan~~----------~~----~~~~ 144 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL-P--HPVAAEDGSFFAQASTV----------FE----RIAR 144 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS-C--EEEECTTSSCEEEEEEE----------EE----ETTE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC-C--ceEECCCCCEEEEEecc----------cc----cccc
Confidence 46666665543 2 6899999999999999986554 2 45555554444322100 00 0001
Q ss_pred EECCCCEEEEEcCCCcEEEEEeCC--------CCeeEEEEcCCCCEEEEEECC-CCeEEEeccCccceeeEEEEeccccc
Q psy10063 494 ASKDHTAKLFTTHDRQLLKTYTTE--------RPVNSAALSPILPHVVLGGGQ-EAREVTTTSTKVGKFDARFYHLIFEE 564 (894)
Q Consensus 494 gs~Dg~V~iwdl~~~~~~~~~~~~--------~~v~~l~~spdg~~l~~~~~~-~~~~v~~~~~~~~~~~v~vwd~~~~~ 564 (894)
|..++.|.++|..+++.+..+... .....++|+|||++|+++... .. .|.++|+.+++
T Consensus 145 G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~-------------~VsVID~~t~k 211 (426)
T 3c75_H 145 GKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAP-------------AVGVVDLEGKT 211 (426)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSC-------------EEEEEETTTTE
T ss_pred CCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCC-------------eEEEEECCCCe
Confidence 224678999999999999887642 346789999999999998753 22 28889999999
Q ss_pred eEEEccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC
Q psy10063 565 EFARIKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS 643 (894)
Q Consensus 565 ~~~~l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~ 643 (894)
.+..+.... +....|+| +.+++.+.||.+.+.++..++.. ......+
T Consensus 212 vv~~I~v~g----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~--------------------------~~~~~~~-- 259 (426)
T 3c75_H 212 FDRMLDVPD----CYHIFPASPTVFYMNCRDGSLARVDFADGETK--------------------------VTNTEVF-- 259 (426)
T ss_dssp EEEEEECCS----EEEEEEEETTEEEEEETTSSEEEEECCTTCCE--------------------------EEECCCC--
T ss_pred EEEEEEcCC----ceeeccCCCcEEEEEcCCCCEEEEECCCCcEE--------------------------EEeeeee--
Confidence 888775321 12334443 56677778888888777332210 0000000
Q ss_pred CCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecc
Q psy10063 644 TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNP 723 (894)
Q Consensus 644 ~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~ 723 (894)
T Consensus 260 -------------------------------------------------------------------------------- 259 (426)
T 3c75_H 260 -------------------------------------------------------------------------------- 259 (426)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee--ec----
Q psy10063 724 FDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT--AG---- 797 (894)
Q Consensus 724 ~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~--~~---- 797 (894)
..... .....+.|.+++..++.....+.|.+.|....... ..
T Consensus 260 -----------------------~v~~~---------p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~ 307 (426)
T 3c75_H 260 -----------------------HTEDE---------LLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEAL 307 (426)
T ss_dssp -----------------------SCTTS---------CBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESS
T ss_pred -----------------------ccCCC---------ceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeec
Confidence 00000 00001234555555555555666666666433211 00
Q ss_pred ---------cccCCCceEeecCCCeEEEEecCC------CCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCc-EEE
Q psy10063 798 ---------FLLSCPDFLFDFDTTREVTTTSTK------VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYA 861 (894)
Q Consensus 798 ---------~~~~~~~~~fS~dg~~l~~as~d~------~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~-~La 861 (894)
...+...++|++|+++++++...+ .+.-+|.|+|+++++.++.+.... ..++|+|++||+ +|+
T Consensus 308 ~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~ly 386 (426)
T 3c75_H 308 TEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLY 386 (426)
T ss_dssp CTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEE
T ss_pred cccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEE
Confidence 112233478999999988875421 112269999999999998886432 478999999999 787
Q ss_pred Eec-CCCcEEEEecCcccccccc
Q psy10063 862 SGG-EDGFVRLHTFDQAYFDYTF 883 (894)
Q Consensus 862 S~s-~Dg~V~vWdl~~~~~~~~~ 883 (894)
++. .++.|.|+|+...+.+..+
T Consensus 387 v~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 387 ALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEETTTTEEEEEETTTCCEEEEE
T ss_pred EEcCCCCeEEEEECCCCCEEEEe
Confidence 776 5999999999999988775
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.50 E-value=7e-12 Score=137.03 Aligned_cols=151 Identities=11% Similarity=0.002 Sum_probs=110.2
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT 489 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~ 489 (894)
....++++. +++++++...++.|.+||..+++.+..+.... ....|+|+++++
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~--------------------------~p~~i~~~~~g~ 96 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFT--------------------------SPRYIHFLSDEK 96 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCS--------------------------SEEEEEEEETTE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCC--------------------------CCcEEEEeCCCe
Confidence 456777774 45555666667899999999999988885432 467788888885
Q ss_pred EEEEEECCCCEEEEEcCCCcEEEEEeCCC------CeeEEEEcCCCCEEEEEEC--CCCeEEEeccCccceeeEEEEecc
Q psy10063 490 MFITASKDHTAKLFTTHDRQLLKTYTTER------PVNSAALSPILPHVVLGGG--QEAREVTTTSTKVGKFDARFYHLI 561 (894)
Q Consensus 490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~------~v~~l~~spdg~~l~~~~~--~~~~~v~~~~~~~~~~~v~vwd~~ 561 (894)
++++...++.|.+||+++++++..+.... ....|++ ++.+|+++.. ++. |.+||+.
T Consensus 97 lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~--------------v~viD~~ 160 (328)
T 3dsm_A 97 AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNR--------------ILKIDTE 160 (328)
T ss_dssp EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCE--------------EEEEETT
T ss_pred EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCE--------------EEEEECC
Confidence 44444478999999999999988887655 6778888 5667777763 343 8899999
Q ss_pred ccceEEEccCCCCCeEEEEEecCCCEEEEEeCC----------CcEEEEECCC
Q psy10063 562 FEEEFARIKGHFGPINSLAFHPDGKSYASGGED----------GFLISNTLSN 604 (894)
Q Consensus 562 ~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D----------g~I~vwdl~~ 604 (894)
+++.+..+... .....++++++|++++++..+ +.|.+||.++
T Consensus 161 t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 161 TDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp TTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred CCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC
Confidence 88888776543 345688899999876666544 5677776644
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=1.1e-12 Score=159.86 Aligned_cols=126 Identities=12% Similarity=0.026 Sum_probs=82.5
Q ss_pred ceEEEEEecCCCEEEEEECC-----CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063 478 PINDMQFSKDATMFITASKD-----HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK 552 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~D-----g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~ 552 (894)
.+..++|||||++|+.++.+ ..|++||+.+++.+........+..++|+|| +.|+++..++....-........
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 46778888888888776543 3599999999988764332233468899999 99999887654100000011113
Q ss_pred eeEEEEeccccc----eEEEccCCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEECCC
Q psy10063 553 FDARFYHLIFEE----EFARIKGHFGPINSLAFHPDGKSYASGGEDG-----FLISNTLSN 604 (894)
Q Consensus 553 ~~v~vwd~~~~~----~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg-----~I~vwdl~~ 604 (894)
..|++|++.++. .+.....|...+.++.|+|||++|+..+.++ .|++||++.
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~ 303 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTN 303 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEET
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCC
Confidence 348888887665 2333333444688999999999988877544 577777643
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.48 E-value=3.1e-12 Score=155.99 Aligned_cols=172 Identities=9% Similarity=0.035 Sum_probs=105.4
Q ss_pred CCEEEEEEccCCCEEEEecCC-----CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063 410 AKITSLLWGNLDQYIITGHAK-----GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF 484 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~D-----g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~ 484 (894)
..+.+++|||||++|+.++.+ ..|+|||+.+|+.+.... +.. .+..++|+|| +.|++++.+....
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~-~~~~~~wspD-~~l~~~~~~~~~~------- 232 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWV-KFSGLAWLGN-DALLYSRFAEPKE------- 232 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEE-ESCCCEESTT-SEEEEEECCCC---------
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCc-eeccEEEECC-CEEEEEEecCccc-------
Confidence 367889999999999887543 469999999998765321 111 1235566666 6665555443210
Q ss_pred ecCCCEEEEEECCCCEEEEEcCCCcE--EEEEeCC---CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063 485 SKDATMFITASKDHTAKLFTTHDRQL--LKTYTTE---RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 485 spdg~~L~sgs~Dg~V~iwdl~~~~~--~~~~~~~---~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
+..+........|++|++.+++. ...+... ..+..+.|+|||++|++.+.++. ....+|++||
T Consensus 233 ---~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~---------~~~~~l~~~d 300 (741)
T 1yr2_A 233 ---GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT---------DPVNTVHVAR 300 (741)
T ss_dssp ---------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT---------CSCCEEEEEE
T ss_pred ---ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC---------CCcceEEEEE
Confidence 00000111234589999987662 2333332 25889999999999998876541 0112388899
Q ss_pred cccc--ceEEEccCCCCCeEEEEEecCCCEEEEEeCC----CcEEEEECCC
Q psy10063 560 LIFE--EEFARIKGHFGPINSLAFHPDGKSYASGGED----GFLISNTLSN 604 (894)
Q Consensus 560 ~~~~--~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D----g~I~vwdl~~ 604 (894)
+..+ ++...+..+...+.... +++|+.|+..+.+ +.|.+|+++.
T Consensus 301 ~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 301 VTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred CCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 8876 31455555655555554 4888888877654 3377777643
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.46 E-value=7.5e-12 Score=133.10 Aligned_cols=237 Identities=12% Similarity=0.064 Sum_probs=166.1
Q ss_pred CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCC--CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063 487 DATMFITASKDHTAKLFTTHDRQLLKTYTTER--PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE 564 (894)
Q Consensus 487 dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~--~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~ 564 (894)
.+++|++++.|+.|++||.++|+.+..+..+. .+.+++++|+|++|+ +.++. |+.||. +|+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~--------------V~~~d~-~G~ 66 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKG--------------AKMITR-DGR 66 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSE--------------EEEECT-TSC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCC--------------EEEECC-CCC
Confidence 46789999999999999999999999998653 789999999999888 33333 778888 688
Q ss_pred eEEEccCCC-CCeEEEEEecCCCEEEEEeC-CCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063 565 EFARIKGHF-GPINSLAFHPDGKSYASGGE-DGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS 642 (894)
Q Consensus 565 ~~~~l~~h~-~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~ 642 (894)
.+..+..+. ..+.++.+.++|++|++.+. ++.|..++. +|+++ ..+...
T Consensus 67 ~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-------------------~Gk~l-------~~~~~~--- 117 (276)
T 3no2_A 67 ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-------------------KGEVL-------SKTEFE--- 117 (276)
T ss_dssp EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-------------------TSCEE-------EEEEEC---
T ss_pred EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-------------------CCCEE-------EEEecc---
Confidence 887777643 47889999999999998876 555555543 12211 000000
Q ss_pred CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEec
Q psy10063 643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN 722 (894)
Q Consensus 643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~ 722 (894)
T Consensus 118 -------------------------------------------------------------------------------- 117 (276)
T 3no2_A 118 -------------------------------------------------------------------------------- 117 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc--
Q psy10063 723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL-- 800 (894)
Q Consensus 723 ~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~-- 800 (894)
+. ..++......+++.++|.+|++...++.|++||.. ++.+..+..
T Consensus 118 ---------------------------~~----~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~ 165 (276)
T 3no2_A 118 ---------------------------TG----IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG 165 (276)
T ss_dssp ---------------------------CS----CSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS
T ss_pred ---------------------------CC----CCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC
Confidence 00 00000011234567889999999999999999988 888776654
Q ss_pred CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCC------CCeeEEEEeeCCcEEEEec--CC------
Q psy10063 801 SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF------GPINSLAFHPDGKSYASGG--ED------ 866 (894)
Q Consensus 801 ~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~------~~V~~l~fSpdg~~LaS~s--~D------ 866 (894)
....+.+.++|..+++....+ .|+.||.++|+.+..+..+. ..+..++..++|.++++.. ..
T Consensus 166 ~~~~~~~~~~g~~~v~~~~~~----~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~ 241 (276)
T 3no2_A 166 TPFSSAFLDNGDCLVACGDAH----CFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKG 241 (276)
T ss_dssp CCCEEEECTTSCEEEECBTTS----EEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGS
T ss_pred CccceeEcCCCCEEEEeCCCC----eEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCcccccccc
Confidence 344566788888887766554 59999999999988775432 2378889999999888873 21
Q ss_pred CcEEEEec-Ccccccccccc
Q psy10063 867 GFVRLHTF-DQAYFDYTFDI 885 (894)
Q Consensus 867 g~V~vWdl-~~~~~~~~~~~ 885 (894)
+..+++++ .+++++..|.-
T Consensus 242 ~~~~~~~~~~~g~~~W~~~~ 261 (276)
T 3no2_A 242 KHPQLVEIDSEGKVVWQLND 261 (276)
T ss_dssp CCCSEEEECTTSBEEEEECC
T ss_pred CCceEEEECCCCCEEEEecC
Confidence 23456666 45666666653
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.43 E-value=5.3e-10 Score=119.28 Aligned_cols=157 Identities=7% Similarity=-0.044 Sum_probs=108.7
Q ss_pred EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE-ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063 404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES-ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM 482 (894)
Q Consensus 404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~-l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l 482 (894)
.+......+.+|++.++|+++++...++.|.+||.. ++.... +..+.. .+.+|
T Consensus 14 ~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~-------------------------~~~~i 67 (300)
T 2qc5_A 14 NLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDA-------------------------KVMCL 67 (300)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTC-------------------------CEEEE
T ss_pred ecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCC-------------------------cceeE
Confidence 344556789999999999988887778899999988 654432 111112 57788
Q ss_pred EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063 483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL 560 (894)
Q Consensus 483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~ 560 (894)
++.++|.++++...++.|.+||.. ++...... ....+.++++.++|+++++....+. |.+|+.
T Consensus 68 ~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~--------------i~~~~~ 132 (300)
T 2qc5_A 68 IVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDR--------------IGKLTA 132 (300)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE--------------EEEECT
T ss_pred EECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCe--------------EEEECC
Confidence 888888877766667889999988 66532221 2367899999999986665544554 666666
Q ss_pred cccceEE-EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063 561 IFEEEFA-RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTL 602 (894)
Q Consensus 561 ~~~~~~~-~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl 602 (894)
. ++... .+......+.+++++++|+++++...++.|.+|+.
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred C-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 6 44432 23334567889999999986666655677877765
No 199
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=2e-11 Score=134.27 Aligned_cols=159 Identities=13% Similarity=0.082 Sum_probs=99.7
Q ss_pred CCEEEEEEccCCCEEEEec--CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063 410 AKITSLLWGNLDQYIITGH--AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD 487 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs--~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd 487 (894)
..+..|+++++|+++++.. .++.++||.+..++. ..+..... ...+.+..+.+|+|+++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~------------------~~~~~~~~p~gv~~d~~ 77 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSG------------------NAIITFDTVLGIKSDGN 77 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCS------------------SCCCCCSCEEEEEECSS
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCccc------------------CcccceeEeeEEEEcCC
Confidence 7899999999999888863 234366776655543 33321100 01122347888999998
Q ss_pred CCEEEEEEC-----CCCEEEEEcCCCcEEEEEeCC-------CCeeEEEEcCCCCEEEEEEC---CCCeEEEeccCccce
Q psy10063 488 ATMFITASK-----DHTAKLFTTHDRQLLKTYTTE-------RPVNSAALSPILPHVVLGGG---QEAREVTTTSTKVGK 552 (894)
Q Consensus 488 g~~L~sgs~-----Dg~V~iwdl~~~~~~~~~~~~-------~~v~~l~~spdg~~l~~~~~---~~~~~v~~~~~~~~~ 552 (894)
|+++++-.. ++.|.+||+.++++++.+... ..+..+++++++.+++++.. ...
T Consensus 78 g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~------------ 145 (343)
T 2qe8_A 78 GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA------------ 145 (343)
T ss_dssp SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC------------
T ss_pred CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC------------
Confidence 876665433 578999999999988877642 24689999987767766654 211
Q ss_pred eeEEEEeccccceEEEccCCCCCeE-EEEEecCCCEEEEEeCCCcEEEE
Q psy10063 553 FDARFYHLIFEEEFARIKGHFGPIN-SLAFHPDGKSYASGGEDGFLISN 600 (894)
Q Consensus 553 ~~v~vwd~~~~~~~~~l~~h~~~V~-~l~~spdg~~l~sgs~Dg~I~vw 600 (894)
.|.+||+..++..+.+.+|..... .+.+..+|..|.+.+.+|.++.|
T Consensus 146 -~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 193 (343)
T 2qe8_A 146 -ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRP 193 (343)
T ss_dssp -EEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECC
T ss_pred -eEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceece
Confidence 288999988887777766533211 12333455555544555544433
No 200
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.40 E-value=4.6e-11 Score=128.14 Aligned_cols=209 Identities=10% Similarity=0.078 Sum_probs=147.1
Q ss_pred CccceeeeeccCcc-EEEecC-CCeE--------EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEe
Q psy10063 378 LSVDRLNSMSPAAR-KLATNA-EPVV--------KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESI 447 (894)
Q Consensus 378 ~~~~~~~~~s~dg~-~l~~~~-~~~~--------~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l 447 (894)
.......+|+++|+ +++... ...+ ...+..+...+.+|+|+++|+++++...++.|.+||..+|+....+
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 33445667888887 333332 2222 2244567788999999999998888877789999999888765443
Q ss_pred cCCC---CCCeeEEEEcCCCCEEEEE----eC-------------CCCc----------------cceEEEEEecCCCEE
Q psy10063 448 SGHA---KEPINDMQFSKDATMFITA----SH-------------SQAV----------------EPINDMQFSKDATMF 491 (894)
Q Consensus 448 ~~h~---~~~V~~v~~spdg~~la~~----~~-------------d~~i----------------~~V~~l~~spdg~~L 491 (894)
.... ...+..++|+++|+++++. .. .+.+ .....++|+|+|++|
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~l 186 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLL 186 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEE
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEE
Confidence 3211 1256789999999988862 20 1111 345789999999999
Q ss_pred EEEECCCCEEEEEcC-CCcE---EEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceE
Q psy10063 492 ITASKDHTAKLFTTH-DRQL---LKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566 (894)
Q Consensus 492 ~sgs~Dg~V~iwdl~-~~~~---~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~ 566 (894)
++.+.++.|++||+. .+++ ...+. +...+.+|+++++|.++++. .+. |.+|+.. ++.+
T Consensus 187 v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~--------------v~~~~~~-g~~~ 249 (296)
T 3e5z_A 187 VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDG--------------VHVLTPD-GDEL 249 (296)
T ss_dssp EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTE--------------EEEECTT-SCEE
T ss_pred EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCe--------------EEEECCC-CCEE
Confidence 777778999999997 5665 34442 23556789999999865555 443 8889886 7777
Q ss_pred EEccCCCCCeEEEEE-ecCCCEEEEEeCCCcEEEEECCCC
Q psy10063 567 ARIKGHFGPINSLAF-HPDGKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 567 ~~l~~h~~~V~~l~~-spdg~~l~sgs~Dg~I~vwdl~~~ 605 (894)
..+..+.. +.+++| .++++.|+.++.++ |..+++...
T Consensus 250 ~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 250 GRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp EEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred EEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence 78877777 999999 58889898888764 445555544
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.40 E-value=3.7e-11 Score=129.54 Aligned_cols=111 Identities=16% Similarity=0.113 Sum_probs=78.2
Q ss_pred eEEEeeC----CCCCEEEEe-cCCCcEEEEEcc-CCce-----eeccc----cCCCceEeecCCCeEEEEecCCCCceeE
Q psy10063 763 GFKMPEP----PKREKLALA-LADKVSERYRDR-KNKA-----TAGFL----LSCPDFLFDFDTTREVTTTSTKVGKFDA 827 (894)
Q Consensus 763 v~~la~s----pdg~~Latg-s~Dg~I~iwd~~-~~~~-----~~~~~----~~~~~~~fS~dg~~l~~as~d~~g~~~I 827 (894)
...++++ +++++|+++ ..++.|++|+.. .++. ...+. .....++++++|...++...++ .|
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~----~i 249 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS----HI 249 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT----EE
T ss_pred cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC----EE
Confidence 3456677 888665544 567889999876 3321 12221 1234577899997666655544 59
Q ss_pred EEeecCCcceeeeccCCCCCeeEEEEeeCCc-EEEEecCCCcEEEEecCcc
Q psy10063 828 RFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFVRLHTFDQA 877 (894)
Q Consensus 828 ~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~-~LaS~s~Dg~V~vWdl~~~ 877 (894)
++||.++++.+..+..+...+.+++|++||+ ++++...++.|.+|+++..
T Consensus 250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 9999988888877777778899999999999 4555666788999998753
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.39 E-value=7.6e-10 Score=122.87 Aligned_cols=153 Identities=7% Similarity=-0.100 Sum_probs=98.0
Q ss_pred EEEEccCCCEEEEec----------CCCcEEEEecCCCeEEEEecCC-CCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063 414 SLLWGNLDQYIITGH----------AKGDICTWDLRMGRELESISGH-AKEPINDMQFSKDATMFITASHSQAVEPINDM 482 (894)
Q Consensus 414 ~l~~spdg~~L~sgs----------~Dg~I~iWd~~tg~~~~~l~~h-~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l 482 (894)
.++|+|||++|+.+. .++.|.+||..+++.+..+... .. ... .+ .....+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~-~~~------------~g------~~p~~~ 130 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAP-RFD------------VG------PYSWMN 130 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcc-ccc------------cC------CCccce
Confidence 999999999999885 3678999999998888777532 11 000 00 024578
Q ss_pred EEecCCCEEEEEEC--CCCEEEEEcCCCcEEEE-EeCCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063 483 QFSKDATMFITASK--DHTAKLFTTHDRQLLKT-YTTERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGKFDARFY 558 (894)
Q Consensus 483 ~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~-~~~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vw 558 (894)
+|+|||++|+++.. +..|.++| .+++++.. +..... +.+.++++ .+++.+.++. +.++
T Consensus 131 ~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~--------------~~~v 192 (373)
T 2mad_H 131 ANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGG--------------LAKT 192 (373)
T ss_pred EECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCC--------------EEEE
Confidence 88999998888774 47899999 99999888 665432 45556654 3444555565 5556
Q ss_pred eccccceEEEcc------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063 559 HLIFEEEFARIK------GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 559 d~~~~~~~~~l~------~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~ 604 (894)
|. .++.+.... +.........+.+++..++..+.++.|.+.|+..
T Consensus 193 d~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~ 243 (373)
T 2mad_H 193 DH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISA 243 (373)
T ss_pred EC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccC
Confidence 66 555442211 1111123345666665555445677888888754
No 203
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.37 E-value=7.8e-11 Score=125.19 Aligned_cols=190 Identities=13% Similarity=0.062 Sum_probs=143.5
Q ss_pred eeccCccEEEecC-CCeEEEEEecCC-CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcC
Q psy10063 385 SMSPAARKLATNA-EPVVKMQVTDQS-AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSK 462 (894)
Q Consensus 385 ~~s~dg~~l~~~~-~~~~~~~l~~H~-~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~sp 462 (894)
+-+.++++.+... .+.+...+..|. ..+.+++++|+|++|++ .++.|++||. +|+.+..+..+....+.++.+.+
T Consensus 10 ~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~ 86 (276)
T 3no2_A 10 GGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAPAGCEMQTARILP 86 (276)
T ss_dssp ECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECT
T ss_pred eeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCCCccccccEECC
Confidence 3344555444444 455666666666 57899999999998884 4678999999 79999999875433788999999
Q ss_pred CCCEEEEEeC-CCCc-------c----------------ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCC
Q psy10063 463 DATMFITASH-SQAV-------E----------------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER 518 (894)
Q Consensus 463 dg~~la~~~~-d~~i-------~----------------~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~ 518 (894)
+|++|++.+. .+.+ + ....+++.++|.+|++...++.|.+||.+ |+.+..+....
T Consensus 87 dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~ 165 (276)
T 3no2_A 87 DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG 165 (276)
T ss_dssp TSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS
T ss_pred CCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC
Confidence 9999988765 3322 1 12234567889999999999999999998 99999998877
Q ss_pred CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC------CCCeEEEEEecCCCEEEEEe
Q psy10063 519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH------FGPINSLAFHPDGKSYASGG 592 (894)
Q Consensus 519 ~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h------~~~V~~l~~spdg~~l~sgs 592 (894)
.+.++.+.++|..|+++...+. |..+|..+|+.+.++..+ ...+..++..++|.++++..
T Consensus 166 ~~~~~~~~~~g~~~v~~~~~~~--------------v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 166 TPFSSAFLDNGDCLVACGDAHC--------------FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CCCEEEECTTSCEEEECBTTSE--------------EEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CccceeEcCCCCEEEEeCCCCe--------------EEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 7888999999998888776654 677787777777776432 23477888888998777764
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.36 E-value=5.3e-11 Score=125.39 Aligned_cols=184 Identities=7% Similarity=0.001 Sum_probs=132.5
Q ss_pred CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-----------
Q psy10063 408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV----------- 476 (894)
Q Consensus 408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i----------- 476 (894)
+...+.+|+|+++|+++++.. ++.|++||...+.. ..+.......+.+|+++++|+++++...++.+
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 142 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT 142 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE
Confidence 345788999999999666666 88999999875543 33432221278999999999876665443322
Q ss_pred -------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccC
Q psy10063 477 -------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTST 548 (894)
Q Consensus 477 -------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~ 548 (894)
..+.+|+++++|+++++...++.|++||...+........ ...+.+|+++++|..+++...++.
T Consensus 143 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~-------- 214 (270)
T 1rwi_B 143 VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ-------- 214 (270)
T ss_dssp ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSC--------
T ss_pred eeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCc--------
Confidence 2567899999999777777788999999887665543322 367899999999955555444554
Q ss_pred ccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc
Q psy10063 549 KVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD 607 (894)
Q Consensus 549 ~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~ 607 (894)
|.+|+............+...+.+|+++++|+++++...++.|++|++...+.
T Consensus 215 ------v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 215 ------VVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp ------EEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred ------EEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 67777765443332233446789999999999888888899999999876543
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.35 E-value=2.8e-10 Score=128.17 Aligned_cols=153 Identities=8% Similarity=-0.001 Sum_probs=106.4
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT 489 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~ 489 (894)
....+|+|+++|+++++...++.|++||+..++....+.... ... ++|+++++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~--------------------------~~~-ia~~~~g~ 183 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK--------------------------GGK-PAVTKDKQ 183 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC--------------------------BCB-CEECTTSS
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC--------------------------CCc-eeEecCCC
Confidence 468899999999988887778999999999887665554422 233 77888888
Q ss_pred EEEEEECCC--CEEEEEcCCCcEEEEE----e-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063 490 MFITASKDH--TAKLFTTHDRQLLKTY----T-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF 562 (894)
Q Consensus 490 ~L~sgs~Dg--~V~iwdl~~~~~~~~~----~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~ 562 (894)
+|+++..++ .|.+|+...+.....+ . ....+.+++++|++..|+++..++. |++||...
T Consensus 184 ~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~--------------I~~~d~~~ 249 (409)
T 3hrp_A 184 RVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKN--------------FGRFNVKT 249 (409)
T ss_dssp EEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCE--------------EEEEETTT
T ss_pred cEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCc--------------EEEEECCC
Confidence 888887765 7888888766655444 2 3466889999997667777655443 67777765
Q ss_pred cceEEE----ccCCCCCe-E-EEEEecC-CCEEEEEeCCCcEEEEECC
Q psy10063 563 EEEFAR----IKGHFGPI-N-SLAFHPD-GKSYASGGEDGFLISNTLS 603 (894)
Q Consensus 563 ~~~~~~----l~~h~~~V-~-~l~~spd-g~~l~sgs~Dg~I~vwdl~ 603 (894)
+..... ..++...- . .|+|+|+ +.++++....+.|++|+.+
T Consensus 250 ~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~ 297 (409)
T 3hrp_A 250 QEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD 297 (409)
T ss_dssp CCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred CCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecC
Confidence 543322 22333322 3 9999995 5555555567778888764
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.34 E-value=2.6e-10 Score=125.43 Aligned_cols=157 Identities=6% Similarity=-0.069 Sum_probs=95.9
Q ss_pred EEEEccCCCEEEEec----------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063 414 SLLWGNLDQYIITGH----------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ 483 (894)
Q Consensus 414 ~l~~spdg~~L~sgs----------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~ 483 (894)
.|+++|||++|+.+. .++.|.+||..+++.+..+....+..+. ....-..++
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~------------------~g~~P~~~a 143 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFL------------------VGTYPWMTS 143 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC------------------BSCCGGGEE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccc------------------cCCCCceEE
Confidence 399999999888775 3578999999999998887532100000 000355688
Q ss_pred EecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063 484 FSKDATMFITASK--DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI 561 (894)
Q Consensus 484 ~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~ 561 (894)
|+|||++|+++.. ++.|.|+|+.+++.+..+...+. ...+....+.++..+.+|.+.+ .++.
T Consensus 144 ~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~--------------v~~~ 207 (386)
T 3sjl_D 144 LTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAK--------------VAFG 207 (386)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSCEEE--------------EECC
T ss_pred EcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeEEECCCCCEEE--------------EECC
Confidence 8899998888764 68899999999999999875432 2223333445556666665322 2222
Q ss_pred c-cceEEE----ccCCCCCeE-EEEEe-cCCCEEEEEeCCCcEEEEECCCC
Q psy10063 562 F-EEEFAR----IKGHFGPIN-SLAFH-PDGKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 562 ~-~~~~~~----l~~h~~~V~-~l~~s-pdg~~l~sgs~Dg~I~vwdl~~~ 605 (894)
. ++.+.. +......+. ...|. ++|++++ .+.+|.|++.|+...
T Consensus 208 ~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~ 257 (386)
T 3sjl_D 208 TEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSG 257 (386)
T ss_dssp SSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTS
T ss_pred CCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCC
Confidence 2 221111 111111221 24664 5675444 566788999888654
No 207
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.33 E-value=1.3e-10 Score=127.87 Aligned_cols=80 Identities=6% Similarity=-0.027 Sum_probs=63.6
Q ss_pred ceEeecCCCeEEEEec-C-C-----CCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCc-EEEEec-CCCcEEEEec
Q psy10063 804 DFLFDFDTTREVTTTS-T-K-----VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGG-EDGFVRLHTF 874 (894)
Q Consensus 804 ~~~fS~dg~~l~~as~-d-~-----~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~-~LaS~s-~Dg~V~vWdl 874 (894)
.++|++|+++++++.. . + .+ .+.|||+++++.++.+..+. ...+|+|++||+ ++++.. .++.|.|||+
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~--~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAE--NTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEE--EEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred eeEEcCCCCEEEEEeccccCcccccCC--CEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence 3789999999988754 2 1 11 36699999999999887554 578999999997 566666 5999999999
Q ss_pred CccccccccccC
Q psy10063 875 DQAYFDYTFDIS 886 (894)
Q Consensus 875 ~~~~~~~~~~~~ 886 (894)
.+.+.+..+...
T Consensus 345 ~t~kvv~~I~vg 356 (368)
T 1mda_H 345 ASDQDQSSVELD 356 (368)
T ss_dssp SSCEEEEECCCC
T ss_pred CCCcEEEEEECC
Confidence 999998887654
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.30 E-value=1.1e-10 Score=141.15 Aligned_cols=172 Identities=12% Similarity=0.116 Sum_probs=100.9
Q ss_pred cCCCCEEEEEEccCCCEEEEe-----cCCCcEEEEecCCCeEEEE-ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063 407 DQSAKITSLLWGNLDQYIITG-----HAKGDICTWDLRMGRELES-ISGHAKEPINDMQFSKDATMFITASHSQAVEPIN 480 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sg-----s~Dg~I~iWd~~tg~~~~~-l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~ 480 (894)
+|...|.+++|||||++||.+ +.+..|+|||+.+|+.+.. +... ....++|+ ||+.|+++..+..-
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~---k~~~~~Ws-Dg~~l~y~~~~~~~---- 197 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV---KFSGISWL-GNEGFFYSSYDKPD---- 197 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE---ESCCCEEE-TTTEEEEEESSCCC----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc---eeccEEEe-CCCEEEEEEecCcc----
Confidence 466679999999999988853 3335799999999986543 2211 11344555 55555554443210
Q ss_pred EEEEecCCCEEEEEECCCCEEEEEcCCCcE--EEEEeCC----CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063 481 DMQFSKDATMFITASKDHTAKLFTTHDRQL--LKTYTTE----RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD 554 (894)
Q Consensus 481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~--~~~~~~~----~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~ 554 (894)
+..+-.......|++|++.+++. ...+... ..+.++.|+|||++|++....+.. .-+
T Consensus 198 -------~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~----------~~~ 260 (693)
T 3iuj_A 198 -------GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTS----------GNR 260 (693)
T ss_dssp --------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSS----------CCE
T ss_pred -------cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCC----------CcE
Confidence 00011111234599999987653 3333332 347889999999999876654321 013
Q ss_pred EEEEeccccc-eEEEccCCCCCeEEEEEecCCCEEEEEe-CC---CcEEEEECCC
Q psy10063 555 ARFYHLIFEE-EFARIKGHFGPINSLAFHPDGKSYASGG-ED---GFLISNTLSN 604 (894)
Q Consensus 555 v~vwd~~~~~-~~~~l~~h~~~V~~l~~spdg~~l~sgs-~D---g~I~vwdl~~ 604 (894)
|+++|+..+. .+..+..+...+... |+++|+.|+..+ .+ +.|.+|+++.
T Consensus 261 i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~ 314 (693)
T 3iuj_A 261 LYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN 314 (693)
T ss_dssp EEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred EEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 7888887663 445555666666555 566666555443 32 3455555543
No 209
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.28 E-value=8.4e-09 Score=109.78 Aligned_cols=211 Identities=8% Similarity=-0.024 Sum_probs=143.2
Q ss_pred cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEE-EEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc---------
Q psy10063 407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGREL-ESISGHAKEPINDMQFSKDATMFITASHSQAV--------- 476 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~-~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i--------- 476 (894)
.+...+.+|+++++|+++++...++.|.+||.. ++.. ..+..... .+.+|++.++|+++++...++.+
T Consensus 54 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~ 131 (299)
T 2z2n_A 54 TPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDS-APYGITEGPNGDIWFTEMNGNRIGRITDDGKI 131 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTC-CEEEEEECTTSCEEEEETTTTEEEEECTTCCE
T ss_pred cccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCC-CceeeEECCCCCEEEEecCCceEEEECCCCCE
Confidence 356789999999999988887778899999986 4432 22222333 78999999999877765443322
Q ss_pred ---------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEE-e-CCCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063 477 ---------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTY-T-TERPVNSAALSPILPHVVLGGGQEAREVTT 545 (894)
Q Consensus 477 ---------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~-~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~ 545 (894)
..+.+|++.++|.++++...++.|.+||. +++..... . ....+.+++++++|..+++....+.
T Consensus 132 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~----- 205 (299)
T 2z2n_A 132 REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK----- 205 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-----
T ss_pred EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce-----
Confidence 35788999999988777767789999999 67665432 2 2356889999999885555444444
Q ss_pred ccCccceeeEEEEeccccceEE-EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc-----cCCCceeeeEE
Q psy10063 546 TSTKVGKFDARFYHLIFEEEFA-RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI-----SEGSFTSSSTQ 619 (894)
Q Consensus 546 ~~~~~~~~~v~vwd~~~~~~~~-~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~-----~~~~~v~~~~~ 619 (894)
|.+||. .++... .+..+...+.+|+++++|+++++...++.|.+|+.. ++.. .....+..+++
T Consensus 206 ---------i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~ 274 (299)
T 2z2n_A 206 ---------IGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF 274 (299)
T ss_dssp ---------EEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE
T ss_pred ---------EEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEe
Confidence 667776 454332 234455678999999999876666577899999984 3211 11234556666
Q ss_pred CcCCcEEEe-cCCeEEEEe
Q psy10063 620 QPDGLVYPS-QGGHIHSLS 637 (894)
Q Consensus 620 spdg~~l~~-~~g~i~~~~ 637 (894)
++|.++.. ..+.+..+.
T Consensus 275 -~~g~l~v~~~~~~l~~~~ 292 (299)
T 2z2n_A 275 -DGETIWFAMECDKIGKLT 292 (299)
T ss_dssp -CSSCEEEEETTTEEEEEE
T ss_pred -cCCCEEEEecCCcEEEEE
Confidence 66666544 244444443
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.28 E-value=6.9e-10 Score=119.51 Aligned_cols=216 Identities=16% Similarity=0.218 Sum_probs=147.0
Q ss_pred ecCCCCEEEEEEccCCCEEEE-------ecCCCcEEEEecCCCeEEEEec----CCCCCCeeEEEEcCC-CCEEEEEeCC
Q psy10063 406 TDQSAKITSLLWGNLDQYIIT-------GHAKGDICTWDLRMGRELESIS----GHAKEPINDMQFSKD-ATMFITASHS 473 (894)
Q Consensus 406 ~~H~~~V~~l~~spdg~~L~s-------gs~Dg~I~iWd~~tg~~~~~l~----~h~~~~V~~v~~spd-g~~la~~~~d 473 (894)
.+.-....+++|+++|+++++ +..++.|.+||..+++...... ++.. .+.+++++++ |+++++...+
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~-~~~~i~~~~~~g~l~v~~~~~ 92 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGG-IPAGCQCDRDANQLFVADMRL 92 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEEC-CEEEEEECSSSSEEEEEETTT
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCC-CCceEEEecCCCcEEEEECCC
Confidence 344556789999999988877 5678899999988887643322 1334 7899999999 7655544322
Q ss_pred --------CCc-------------cceEEEEEecCCCEEEEEECC---------------CCEEEEEcCCCcEEEEEeCC
Q psy10063 474 --------QAV-------------EPINDMQFSKDATMFITASKD---------------HTAKLFTTHDRQLLKTYTTE 517 (894)
Q Consensus 474 --------~~i-------------~~V~~l~~spdg~~L~sgs~D---------------g~V~iwdl~~~~~~~~~~~~ 517 (894)
+.+ ..+.+|+++++|+++++...+ +.|..||.. ++....+.+.
T Consensus 93 ~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~ 171 (314)
T 1pjx_A 93 GLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF 171 (314)
T ss_dssp EEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE
T ss_pred CEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC
Confidence 111 136789999999887776554 467777765 6655554444
Q ss_pred CCeeEEEEc----CCCCEEEEEEC-CCCeEEEeccCccceeeEEEEecc-ccc-----eEEEccCCC-CCeEEEEEecCC
Q psy10063 518 RPVNSAALS----PILPHVVLGGG-QEAREVTTTSTKVGKFDARFYHLI-FEE-----EFARIKGHF-GPINSLAFHPDG 585 (894)
Q Consensus 518 ~~v~~l~~s----pdg~~l~~~~~-~~~~~v~~~~~~~~~~~v~vwd~~-~~~-----~~~~l~~h~-~~V~~l~~spdg 585 (894)
.....++|+ ++|+.|+++.. ++. |.+|++. .++ .+..+.++. ..+..|+++++|
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~--------------i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G 237 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKK--------------LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN 237 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTE--------------EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCe--------------EEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC
Confidence 567899999 99988877764 344 5666654 232 233344454 668899999999
Q ss_pred CEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEECcCCc-EEEecCC--eEEEEe
Q psy10063 586 KSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGL-VYPSQGG--HIHSLS 637 (894)
Q Consensus 586 ~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~-~l~~~~g--~i~~~~ 637 (894)
+++++...++.|.+|+.++++.+. ....+..++++++|. +++...+ .+..+.
T Consensus 238 ~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp CEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEe
Confidence 988888788999999988554321 235677888888887 4443333 555554
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.27 E-value=2.1e-09 Score=115.33 Aligned_cols=168 Identities=10% Similarity=0.133 Sum_probs=103.0
Q ss_pred EEEEecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063 402 KMQVTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN 480 (894)
Q Consensus 402 ~~~l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~ 480 (894)
...+..+..-.-+..|+++++ ++++...++.|++||..+++. ..+.. .. .+.
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~-~~-------------------------~~~ 57 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTM-DA-------------------------PVS 57 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEEC-SS-------------------------CEE
T ss_pred EEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeC-CC-------------------------ceE
Confidence 334555666778999999654 566666788999999987764 33322 22 577
Q ss_pred EEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-----CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063 481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE-----RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA 555 (894)
Q Consensus 481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-----~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v 555 (894)
+++|+++|+++++ . ++.|.+||.++++........ ..+..++++++|++++......... ....... .
T Consensus 58 ~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~---~~~~~~~--~ 130 (297)
T 3g4e_A 58 SVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAP---AVLERHQ--G 130 (297)
T ss_dssp EEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBT---TBCCTTC--E
T ss_pred EEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCccccc---ccccCCC--c
Confidence 7888888885444 3 567999999888765544431 3478899999999665443322100 0000000 2
Q ss_pred EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECC
Q psy10063 556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLS 603 (894)
Q Consensus 556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~ 603 (894)
++|.+.....+..+..+......++|+||++.|+.+ +.++.|.+|+++
T Consensus 131 ~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 131 ALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp EEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred EEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence 333332222222233344456889999999876544 456788888863
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.24 E-value=1.7e-09 Score=121.00 Aligned_cols=155 Identities=8% Similarity=-0.059 Sum_probs=93.6
Q ss_pred EEEEccCCCEEEEec----------CCCcEEEEecCCCeEEEEecCC-CCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063 414 SLLWGNLDQYIITGH----------AKGDICTWDLRMGRELESISGH-AKEPINDMQFSKDATMFITASHSQAVEPINDM 482 (894)
Q Consensus 414 ~l~~spdg~~L~sgs----------~Dg~I~iWd~~tg~~~~~l~~h-~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l 482 (894)
.++|+|||++|+.+. .++.|.++|..+++.++.+... .. ... .......+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~-r~~------------------~g~~P~~~ 182 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP-RFL------------------VGTYQWMN 182 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC-CCC------------------BSCCGGGS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc-ccc------------------cCCCcceE
Confidence 899999999888875 3678999999999998887532 11 000 00024567
Q ss_pred EEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063 483 QFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTTERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 483 ~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
+|+|||++|+++.. ++.|.+.|+.+++.+..+...+. ....|+| +.++..+.++.+ .+.+
T Consensus 183 ~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~~~dG~~--------------~~V~ 245 (426)
T 3c75_H 183 ALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMNCRDGSL--------------ARVD 245 (426)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSSE--------------EEEE
T ss_pred EEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEEcCCCCE--------------EEEE
Confidence 88888888888764 57899999999999988876432 2222222 333334444432 1122
Q ss_pred ccccceEE----EccCCCCC-eEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063 560 LIFEEEFA----RIKGHFGP-INSLAFHPDGKSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 560 ~~~~~~~~----~l~~h~~~-V~~l~~spdg~~l~sgs~Dg~I~vwdl~~ 604 (894)
+..++... .+.....+ ...+.|.++++.++.....+.|.+.|+..
T Consensus 246 ~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~ 295 (426)
T 3c75_H 246 FADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTA 295 (426)
T ss_dssp CCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECS
T ss_pred CCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccC
Confidence 22222111 11111111 12346778877777667777788777643
No 213
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.22 E-value=6e-09 Score=115.73 Aligned_cols=154 Identities=13% Similarity=0.084 Sum_probs=96.0
Q ss_pred CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCC
Q psy10063 420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHT 499 (894)
Q Consensus 420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~ 499 (894)
++..|+.++.++.|+.||.++|+.+..+........ ....+ ..+.+. ...++..|+.++.++.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~----~~~~~------------~~~~~~-~~~~~~~v~v~~~~g~ 114 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGW----FSKEP------------ALLSGG-VTVSGGHVYIGSEKAQ 114 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---C----CSCCC------------CCEEEE-EEEETTEEEEEETTSE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCcccccc----ccccC------------cccccC-ceEeCCEEEEEcCCCE
Confidence 366888888899999999999998876664321000 00000 012111 1123567888889999
Q ss_pred EEEEEcCCCcEEEEEeCCCCee-EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCe--
Q psy10063 500 AKLFTTHDRQLLKTYTTERPVN-SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI-- 576 (894)
Q Consensus 500 V~iwdl~~~~~~~~~~~~~~v~-~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V-- 576 (894)
|..+|.++|+++..+.....+. ...+. +..|++++.++. |..+|.++|+.+..+.......
T Consensus 115 l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~--------------l~~~d~~tG~~~W~~~~~~~~~~~ 178 (376)
T 3q7m_A 115 VYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQ--------------LQALNEADGAVKWTVNLDMPSLSL 178 (376)
T ss_dssp EEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSE--------------EEEEETTTCCEEEEEECCC-----
T ss_pred EEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCe--------------EEEEECCCCcEEEEEeCCCCceee
Confidence 9999999999988777644332 22222 457777777765 6777777777666554322111
Q ss_pred ---EEEEEecCCCEEEEEeCCCcEEEEECCCCccc
Q psy10063 577 ---NSLAFHPDGKSYASGGEDGFLISNTLSNGLDI 608 (894)
Q Consensus 577 ---~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~ 608 (894)
...... +..|+.+..++.|..+|.++++.+
T Consensus 179 ~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~ 211 (376)
T 3q7m_A 179 RGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMI 211 (376)
T ss_dssp CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEE
T ss_pred cCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEE
Confidence 122222 446777888999999999877644
No 214
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.22 E-value=1.2e-09 Score=130.96 Aligned_cols=66 Identities=11% Similarity=0.060 Sum_probs=54.6
Q ss_pred eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccC
Q psy10063 826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQ 892 (894)
Q Consensus 826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~q 892 (894)
.|+.||+.+|+.+-.+. |..++....++.++.+|+.++.||.|++||+++++.+..+.++..+...
T Consensus 458 ~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~ 523 (677)
T 1kb0_A 458 RLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAA 523 (677)
T ss_dssp EEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred EEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccC
Confidence 59999999999887765 3345666778888999999999999999999999999999877655443
No 215
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.22 E-value=3.7e-10 Score=124.65 Aligned_cols=165 Identities=7% Similarity=0.040 Sum_probs=124.2
Q ss_pred CCccceeeeeccCccEEEecCCCeEEE--------------------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy10063 377 PLSVDRLNSMSPAARKLATNAEPVVKM--------------------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTW 436 (894)
Q Consensus 377 ~~~~~~~~~~s~dg~~l~~~~~~~~~~--------------------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iW 436 (894)
+.....++++++.+++++.++...+++ ....+.+ |.+|+| |+++|+++ .++.|++|
T Consensus 36 ~~~~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 36 PFASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CSSCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred CcccccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 444567778888888888776554432 2334667 999999 99999999 88999999
Q ss_pred ecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC
Q psy10063 437 DLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT 516 (894)
Q Consensus 437 d~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~ 516 (894)
|+.+......+..|.. .|.++.+.+. .|+++..||.|.+||++.++... +
T Consensus 112 dv~sl~~~~~~~~~~~-------------------------~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~ 161 (388)
T 1xip_A 112 DLEELSEFRTVTSFEK-------------------------PVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---L 161 (388)
T ss_dssp ESSSTTCEEEEEECSS-------------------------CEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---E
T ss_pred EchhhhccCccceeec-------------------------ceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---c
Confidence 9987765555666655 3445555443 28888999999999999888754 3
Q ss_pred CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce--EEEc------c---CCCCCeEEEEEecCC
Q psy10063 517 ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE--FARI------K---GHFGPINSLAFHPDG 585 (894)
Q Consensus 517 ~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~--~~~l------~---~h~~~V~~l~~spdg 585 (894)
...|.|++|||+| ++++..++. +++|+...++. .+.+ . +|...|.+|.|.+++
T Consensus 162 ~~~Vs~v~WSpkG--~~vg~~dg~--------------i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~ 225 (388)
T 1xip_A 162 AQNVTSFDVTNSQ--LAVLLKDRS--------------FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ 225 (388)
T ss_dssp EESEEEEEECSSE--EEEEETTSC--------------EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS
T ss_pred cCCceEEEEcCCc--eEEEEcCCc--------------EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC
Confidence 4589999999999 788888887 67776665554 4444 2 478899999999999
Q ss_pred CEEEEE
Q psy10063 586 KSYASG 591 (894)
Q Consensus 586 ~~l~sg 591 (894)
.+|++-
T Consensus 226 ~flv~y 231 (388)
T 1xip_A 226 DFLAVF 231 (388)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 888753
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.19 E-value=1.8e-08 Score=109.62 Aligned_cols=156 Identities=15% Similarity=0.037 Sum_probs=99.0
Q ss_pred CCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063 408 QSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK 486 (894)
Q Consensus 408 H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp 486 (894)
......+++|+|+++ ++++...++.|.+||..+++.. .+.. .. .+.+++|++
T Consensus 47 ~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~~-------------------------~v~~i~~~~ 99 (326)
T 2ghs_A 47 PMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL-PF-------------------------MGSALAKIS 99 (326)
T ss_dssp CCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC-SS-------------------------CEEEEEEEE
T ss_pred CCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEC-CC-------------------------cceEEEEeC
Confidence 344567889999855 5566667889999999877643 2321 22 477788888
Q ss_pred CCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-----CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063 487 DATMFITASKDHTAKLFTTHDRQLLKTYTTE-----RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI 561 (894)
Q Consensus 487 dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-----~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~ 561 (894)
+|+++++. .+ .|.+||.++++........ ..+.+++++++|++++....... ......|..++
T Consensus 100 dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~--------~~~~~~l~~~~-- 167 (326)
T 2ghs_A 100 DSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA--------ETGAGSIYHVA-- 167 (326)
T ss_dssp TTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC--------CTTCEEEEEEE--
T ss_pred CCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC--------CCCceEEEEEe--
Confidence 88766654 44 4999999888865544321 35789999999986654432210 00000133444
Q ss_pred ccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECC
Q psy10063 562 FEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLS 603 (894)
Q Consensus 562 ~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~ 603 (894)
.++.. .+..+......++|++||++|+.+. .++.|.+|+++
T Consensus 168 ~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 168 KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 33332 2323334567899999998776554 56788888874
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.19 E-value=2.5e-09 Score=115.16 Aligned_cols=100 Identities=10% Similarity=-0.022 Sum_probs=69.2
Q ss_pred eEEEeeCCCCCEEEEecCC------CcEEEEEccCCce-----eecc-ccCCCceEeecCCCeEEEEecCCCCceeEEEe
Q psy10063 763 GFKMPEPPKREKLALALAD------KVSERYRDRKNKA-----TAGF-LLSCPDFLFDFDTTREVTTTSTKVGKFDARFY 830 (894)
Q Consensus 763 v~~la~spdg~~Latgs~D------g~I~iwd~~~~~~-----~~~~-~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vw 830 (894)
...++|+||++.|+++... +.|++|++..... +... ......+++.++|. |+++..+ .|++|
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-----gv~~~ 263 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-----GVCVF 263 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-----EEEEE
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-----cEEEE
Confidence 4568889999887776655 6799998765431 1111 12234678899998 4444433 39999
Q ss_pred ecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEE
Q psy10063 831 HLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVR 870 (894)
Q Consensus 831 d~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~ 870 (894)
+. .|+.+..+..+. .+.+++|+++++.|+.++.++..+
T Consensus 264 ~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 264 DS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp CT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred CC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 98 477777777665 588999999998888877765333
No 218
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.18 E-value=7.6e-09 Score=124.07 Aligned_cols=203 Identities=10% Similarity=-0.002 Sum_probs=122.5
Q ss_pred cceeeeeccCccEEEecC-CCeEEEEEecCCC-----------CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEe
Q psy10063 380 VDRLNSMSPAARKLATNA-EPVVKMQVTDQSA-----------KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESI 447 (894)
Q Consensus 380 ~~~~~~~s~dg~~l~~~~-~~~~~~~l~~H~~-----------~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l 447 (894)
..++...+.++++.+... .+.++..+..... ....+++ ++.+|+.++.|+.|+.+|..+|+.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 344555566666665543 3344443332211 0122333 4678899999999999999999998888
Q ss_pred cCC-CCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE------CCCCEEEEEcCCCcEEEEEeCCCC-
Q psy10063 448 SGH-AKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS------KDHTAKLFTTHDRQLLKTYTTERP- 519 (894)
Q Consensus 448 ~~h-~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs------~Dg~V~iwdl~~~~~~~~~~~~~~- 519 (894)
..+ ...... .+.+.-...+ ..|+.++ .++.|+.||.++|+++..+.....
T Consensus 155 ~~~~~~~~~~---------------------~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~ 212 (677)
T 1kb0_A 155 NTFEGQKGSL---------------------TITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGD 212 (677)
T ss_dssp ETTTTCCSSC---------------------BCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCC
T ss_pred cCCcCcCcCc---------------------ccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCC
Confidence 755 210000 0100000012 3444443 278999999999999988764211
Q ss_pred --------------------------------eeEEEEcCCCCEEEEEECCCCeEEEeccCcc-------ceeeEEEEec
Q psy10063 520 --------------------------------VNSAALSPILPHVVLGGGQEAREVTTTSTKV-------GKFDARFYHL 560 (894)
Q Consensus 520 --------------------------------v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~-------~~~~v~vwd~ 560 (894)
...+++++++.+|+++..++.. |...... ..-.|..+|.
T Consensus 213 ~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~--w~~~~~~~~~gd~~~~~sv~AlD~ 290 (677)
T 1kb0_A 213 PSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSP--WSHKVRSPKGGDNLYLASIVALDP 290 (677)
T ss_dssp TTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEES--SCHHHHSTTCCCCTTTTEEEEECT
T ss_pred ccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcc--ccCCCCCccCCCCeeeEEEEEEEC
Confidence 1357889999999988776532 2211100 0013888899
Q ss_pred cccceEEEccC--CC-------CCeEEEEEecCC---CEEEEEeCCCcEEEEECCCCccc
Q psy10063 561 IFEEEFARIKG--HF-------GPINSLAFHPDG---KSYASGGEDGFLISNTLSNGLDI 608 (894)
Q Consensus 561 ~~~~~~~~l~~--h~-------~~V~~l~~spdg---~~l~sgs~Dg~I~vwdl~~~~~~ 608 (894)
.+|+.+-.+.. |. .....+....+| +.|+.++.+|.|+++|.++++.+
T Consensus 291 ~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 291 DTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp TTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 99988766543 32 122233344477 67899999999999999888754
No 219
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.18 E-value=2e-09 Score=129.42 Aligned_cols=67 Identities=12% Similarity=0.025 Sum_probs=55.1
Q ss_pred eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063 826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP 893 (894)
Q Consensus 826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp 893 (894)
.|+.||+.+|+.+-.+..|. ++....++..+.+|+.++.||.|++||.++++.+.+++++..+...|
T Consensus 456 ~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p 522 (689)
T 1yiq_A 456 KLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAP 522 (689)
T ss_dssp EEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred eEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCc
Confidence 59999999999987776554 34445777788899999999999999999999999998876665444
No 220
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.17 E-value=4.8e-08 Score=103.87 Aligned_cols=205 Identities=11% Similarity=0.030 Sum_probs=138.9
Q ss_pred cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE-ecCCCCCCeeEEEEcCCCCEEEEEeCCCCc---------
Q psy10063 407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES-ISGHAKEPINDMQFSKDATMFITASHSQAV--------- 476 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~-l~~h~~~~V~~v~~spdg~~la~~~~d~~i--------- 476 (894)
.+...+.+|++.++|+++++...++.|.+||.. ++.... +..... .+.++++.++|+++++...++.+
T Consensus 59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 136 (300)
T 2qc5_A 59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDS-GPYGITEGLNGDIWFTQLNGDRIGKLTADGTI 136 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTC-CEEEEEECSTTCEEEEETTTTEEEEECTTSCE
T ss_pred CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCC-CCccceECCCCCEEEEccCCCeEEEECCCCCE
Confidence 345789999999999988877777889999988 665322 222333 78999999999877765433322
Q ss_pred ---------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063 477 ---------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTT 545 (894)
Q Consensus 477 ---------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~ 545 (894)
..+.+|++.++|+++++...++.|.+||. +++...... ....+.++++.++|..+++....+.
T Consensus 137 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~----- 210 (300)
T 2qc5_A 137 YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK----- 210 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-----
T ss_pred EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCE-----
Confidence 35678889999997766666788999998 666554221 2356889999999875554444443
Q ss_pred ccCccceeeEEEEeccccceEE-EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc---cc-CCCceeeeEEC
Q psy10063 546 TSTKVGKFDARFYHLIFEEEFA-RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD---IS-EGSFTSSSTQQ 620 (894)
Q Consensus 546 ~~~~~~~~~v~vwd~~~~~~~~-~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~---~~-~~~~v~~~~~s 620 (894)
|.+|+. .++... .+..+...+.+|+++++|+++++...++.|.+|+...... +. ....+..+++.
T Consensus 211 ---------i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~ 280 (300)
T 2qc5_A 211 ---------IGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITFG 280 (300)
T ss_dssp ---------EEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEEC
T ss_pred ---------EEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCCCcEEEEECCccCCccceeEeC
Confidence 666666 343332 2334556789999999998766666678999999843211 11 12345667777
Q ss_pred cCCcEEEec
Q psy10063 621 PDGLVYPSQ 629 (894)
Q Consensus 621 pdg~~l~~~ 629 (894)
++|.++...
T Consensus 281 ~~g~l~v~~ 289 (300)
T 2qc5_A 281 KDGSVWFAL 289 (300)
T ss_dssp TTSCEEEEC
T ss_pred CCCCEEEEc
Confidence 777665443
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.14 E-value=4.3e-09 Score=113.34 Aligned_cols=218 Identities=13% Similarity=0.115 Sum_probs=136.9
Q ss_pred EecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------
Q psy10063 405 VTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV------- 476 (894)
Q Consensus 405 l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------- 476 (894)
+..+.....+++|+++|+ +++++..++.|.+|+. .++ +..+..+.. .+..++|+++|+++++....+.+
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~-~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g 116 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATA-FTNGNAVDAQQRLVHCEHGRRAITRSDADG 116 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCS-CEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCC-ccceeeECCCCCEEEEECCCCEEEEECCCC
Confidence 344566778999999998 6677777889999998 455 344544555 78999999999966654332222
Q ss_pred --------------cceEEEEEecCCCEEEE----EEC-------------CCCEEEEEcCCCcEEEEEeCCCCeeEEEE
Q psy10063 477 --------------EPINDMQFSKDATMFIT----ASK-------------DHTAKLFTTHDRQLLKTYTTERPVNSAAL 525 (894)
Q Consensus 477 --------------~~V~~l~~spdg~~L~s----gs~-------------Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~ 525 (894)
..+.+++++++|+++++ |.. .+.|..||..+++..... .......++|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~ 195 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAF 195 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEE
T ss_pred CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEE
Confidence 13456899999998876 322 245777777777765544 4456788999
Q ss_pred cCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce--EEEc-cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063 526 SPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE--FARI-KGHFGPINSLAFHPDGKSYASGGEDGFLISNTL 602 (894)
Q Consensus 526 spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~--~~~l-~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl 602 (894)
+|||+.|+++...... .+...|++|++..+.. ...+ ....+....|+++++|++.++ ..+ .|.+|+.
T Consensus 196 spdg~~lyv~~~~~~~--------~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~ 265 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQG--------HGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDS 265 (305)
T ss_dssp CTTSSEEEEEECCC-----------CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECT
T ss_pred cCCCCEEEEEecCCcC--------CCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECC
Confidence 9999998888765200 0000156666654321 0111 112344567899999995444 444 4999998
Q ss_pred CCCcc--ccCCCceeeeEECcCCcEE-EecCCeEEEE
Q psy10063 603 SNGLD--ISEGSFTSSSTQQPDGLVY-PSQGGHIHSL 636 (894)
Q Consensus 603 ~~~~~--~~~~~~v~~~~~spdg~~l-~~~~g~i~~~ 636 (894)
+.... +.....+..++|.+++..+ .+..+.+..+
T Consensus 266 ~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 266 DGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp TSCEEEEEECSSCCCEEEECTTSCEEEEEETTEEEEE
T ss_pred CCCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 54321 1223346677888777544 3444444443
No 222
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.09 E-value=1.2e-09 Score=124.73 Aligned_cols=335 Identities=9% Similarity=0.009 Sum_probs=195.0
Q ss_pred EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEe----------CCC--Cc--cceEEEEEec--
Q psy10063 423 YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITAS----------HSQ--AV--EPINDMQFSK-- 486 (894)
Q Consensus 423 ~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~----------~d~--~i--~~V~~l~~sp-- 486 (894)
.+.||+..|.|+|+-+.+++.++.+..-...+-..--|..+.+.++..+ ..| .+ +......+|.
T Consensus 17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~ 96 (595)
T 1fwx_A 17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE 96 (595)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEET
T ss_pred EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCC
Confidence 3567888999999999999998887532110000000000001111000 001 01 1222244444
Q ss_pred ---CCCEEEEEECC-CCEEEEEcCCCcEEEEEeC--CCCeeEEEE-c-CCCCEEEEEECCCC------eEEEeccCccce
Q psy10063 487 ---DATMFITASKD-HTAKLFTTHDRQLLKTYTT--ERPVNSAAL-S-PILPHVVLGGGQEA------REVTTTSTKVGK 552 (894)
Q Consensus 487 ---dg~~L~sgs~D-g~V~iwdl~~~~~~~~~~~--~~~v~~l~~-s-pdg~~l~~~~~~~~------~~v~~~~~~~~~ 552 (894)
||++|+.+..+ ..|.+.|++..++.+.+.. ...+..+++ + |+++++++++.... ..+.. .....
T Consensus 97 g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~--~~~~~ 174 (595)
T 1fwx_A 97 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED--VANYV 174 (595)
T ss_dssp TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC--GGGEE
T ss_pred CCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc--ccccC
Confidence 88888887664 5699999999999986654 467889998 5 99999999874321 11111 11122
Q ss_pred eeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC---------------cEEEEECCCCccccCCCceeee
Q psy10063 553 FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG---------------FLISNTLSNGLDISEGSFTSSS 617 (894)
Q Consensus 553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg---------------~I~vwdl~~~~~~~~~~~v~~~ 617 (894)
-.+.++|.++.+.+..+.--. ....+++++||+++++.+.+. .|.+++....+.
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~---------- 243 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK---------- 243 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH----------
T ss_pred ceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeE----------
Confidence 248899999988887765322 456788999999999988653 255555432221
Q ss_pred EECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEe
Q psy10063 618 TQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVEL 697 (894)
Q Consensus 618 ~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 697 (894)
+.++|+.... +.+..++.... .+
T Consensus 244 -~v~~Gk~~~i--~~V~VID~~~~--------------------------------------~~---------------- 266 (595)
T 1fwx_A 244 -AIAAGDYQEL--NGVKVVDGRKE--------------------------------------AS---------------- 266 (595)
T ss_dssp -HHHHTCSEEE--TTEEEEECSGG--------------------------------------GC----------------
T ss_pred -eccCCCeeEE--CcEEEEeCccc--------------------------------------CC----------------
Confidence 2233332211 11222221000 00
Q ss_pred ccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEE
Q psy10063 698 TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLAL 777 (894)
Q Consensus 698 s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Lat 777 (894)
... + ..+. -.....++.++|||+++++
T Consensus 267 ----~~~--------------~----------------------------------~~Ip-vg~~PhGv~~sPDGk~v~V 293 (595)
T 1fwx_A 267 ----SLF--------------T----------------------------------RYIP-IANNPHGCNMAPDKKHLCV 293 (595)
T ss_dssp ----CSS--------------E----------------------------------EEEE-EESSCCCEEECTTSSEEEE
T ss_pred ----cee--------------E----------------------------------EEEe-cCCCceEEEEcCCCCEEEE
Confidence 000 0 0000 0012347889999998776
Q ss_pred e-cCCCcEEEEEccCCc------------eeecccc--CCCceEeecCCCeEEEEecCCCCceeEEEeecCC--------
Q psy10063 778 A-LADKVSERYRDRKNK------------ATAGFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF-------- 834 (894)
Q Consensus 778 g-s~Dg~I~iwd~~~~~------------~~~~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t-------- 834 (894)
+ ..+..|.++|+.+.+ ....... +...++|+++| ++++...-.. +|.+|+++.
T Consensus 294 ~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~lds---qV~kwdi~~a~~~~~g~ 369 (595)
T 1fwx_A 294 AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDS---QVVKWNIEDAIRAYAGE 369 (595)
T ss_dssp ECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTT---EEEEEEHHHHHHHHHTC
T ss_pred eCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCC---cEEEEEhhHhhhhhccc
Confidence 5 467889999998663 2333332 33467899999 6666555433 699999987
Q ss_pred --cceeeeccCCCCCe-----eEEEEeeCCcEEEEe---cCCCcE----------EEEecCccccccccc
Q psy10063 835 --EEEFARIKGHFGPI-----NSLAFHPDGKSYASG---GEDGFV----------RLHTFDQAYFDYTFD 884 (894)
Q Consensus 835 --g~~l~~l~gH~~~V-----~~l~fSpdg~~LaS~---s~Dg~V----------~vWdl~~~~~~~~~~ 884 (894)
.+.+.++..|..+- .++.+++||+||+++ +.|+.+ .|+|+.++++....+
T Consensus 370 ~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d 439 (595)
T 1fwx_A 370 KVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHD 439 (595)
T ss_dssp SCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEE
T ss_pred ccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEE
Confidence 45667777665432 223558999999985 456643 889997776554433
No 223
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.07 E-value=1.3e-09 Score=120.28 Aligned_cols=175 Identities=13% Similarity=0.045 Sum_probs=124.2
Q ss_pred CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCE
Q psy10063 411 KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATM 490 (894)
Q Consensus 411 ~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~ 490 (894)
.+..|++++...+|++|+.+ .++||+++..+... ..... . |.+ ..++ . +..|..|+| |+.+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~--~~~~~-~-----~~~--~~~~--~----lp~V~~l~f--d~~~ 99 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHI--TSDST-P-----LTF--KWEK--E----IPDVIFVCF--HGDQ 99 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHH--HSSSC-C-----CCC--SEEE--E----CTTEEEEEE--ETTE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhh--ccccc-c-----ccc--eEEe--e----CCCeeEEEE--CCCE
Confidence 69999999999999999988 46679976443100 00000 0 000 0000 0 013888999 8899
Q ss_pred EEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc
Q psy10063 491 FITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI 569 (894)
Q Consensus 491 L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l 569 (894)
|+++ .++.|++||+++......+. +...+.++.+.+. .++++..+|. |.+||+..++...
T Consensus 100 L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~--------------L~v~dl~~~~~~~-- 160 (388)
T 1xip_A 100 VLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVND--------------LSALDLRTKSTKQ-- 160 (388)
T ss_dssp EEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSE--------------EEEEETTTCCEEE--
T ss_pred EEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCC--------------EEEEEccCCcccc--
Confidence 9998 88999999998766544443 4567888777654 3888888886 8899998777653
Q ss_pred cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc-----c------c----CCCceeeeEECcCCcEEE
Q psy10063 570 KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD-----I------S----EGSFTSSSTQQPDGLVYP 627 (894)
Q Consensus 570 ~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~-----~------~----~~~~v~~~~~spdg~~l~ 627 (894)
+...|.|++|+|+| ++.|..||.|++|+.+..+. + . +...+.++.|.+++.+++
T Consensus 161 --~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 161 --LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp --EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred --ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 45689999999999 77899999999998876652 1 1 346677888888877664
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.07 E-value=1.8e-09 Score=118.86 Aligned_cols=85 Identities=9% Similarity=0.133 Sum_probs=64.2
Q ss_pred EeeCCCCCEEEEecC---------CCcEEEEEccCCceeeccccC--CCceEeecCCCeEEEEec--CCCCceeEEEeec
Q psy10063 766 MPEPPKREKLALALA---------DKVSERYRDRKNKATAGFLLS--CPDFLFDFDTTREVTTTS--TKVGKFDARFYHL 832 (894)
Q Consensus 766 la~spdg~~Latgs~---------Dg~I~iwd~~~~~~~~~~~~~--~~~~~fS~dg~~l~~as~--d~~g~~~I~vwd~ 832 (894)
++++||+++|+++.. ++.+.++|..+.+.+..+..+ ...++|++||++++++.. ++ .|.|+|+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~----~VsVID~ 344 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTE----VLDIYDA 344 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTT----EEEEEES
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCC----eEEEEEC
Confidence 568899888876533 235669999999988877654 567889999997766665 33 6999999
Q ss_pred CCcceeeeccCCCCCeeEEEEee
Q psy10063 833 IFEEEFARIKGHFGPINSLAFHP 855 (894)
Q Consensus 833 ~tg~~l~~l~gH~~~V~~l~fSp 855 (894)
.+++.+..+..+..+ +.|+|.+
T Consensus 345 ~t~kvv~~I~vg~~P-~~i~~~~ 366 (368)
T 1mda_H 345 ASDQDQSSVELDKGP-ESLSVQN 366 (368)
T ss_dssp SSCEEEEECCCCSCC-CEEECCC
T ss_pred CCCcEEEEEECCCCC-CEEEeec
Confidence 999999999866543 4666654
No 225
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.05 E-value=4.8e-06 Score=102.03 Aligned_cols=385 Identities=8% Similarity=-0.016 Sum_probs=201.0
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCC---CeeEEEEcCCCCEEEEEeCCCC---------c-
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKE---PINDMQFSKDATMFITASHSQA---------V- 476 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~---~V~~v~~spdg~~la~~~~d~~---------i- 476 (894)
..|.+|...++|.+.+ |..+| |.+||..+++... +...... .|.+|...++|.+.+... .+- +
T Consensus 88 n~I~~i~~d~~g~lWi-gT~~G-l~~yd~~~~~f~~-~~~~~~~~~~~i~~i~~d~~g~lwi~t~-~gl~~~~~~~~~~~ 163 (795)
T 4a2l_A 88 DISRIVKTDSQGRVWI-GTRDG-LSRYDEEKDIFQN-FFYEKNGKHLQVNGIEEISPEQLLISTP-EGLIMFDIKESKFI 163 (795)
T ss_dssp SCEEEEEECTTSCEEE-EESSC-EEEEETTTTEEEE-ECCEETTEECCCCEEEEEETTEEEEEET-TEEEEEETTTTEEE
T ss_pred cceeEEEECCCCCEEE-EeCCc-hheeCCCCCeEEe-ccccccCCCceEEEEEECCCCCEEEEEC-CceEEEECCCCEEE
Confidence 5799999998886554 44454 8999988776433 3322110 288888888887655432 211 1
Q ss_pred --------cc-eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063 477 --------EP-INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTT 545 (894)
Q Consensus 477 --------~~-V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~ 545 (894)
.. |.+|...++|.+.+ +..++.|..||.+.++...... ....|.++....+|. |.++...+.
T Consensus 164 ~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt~~~G----- 236 (795)
T 4a2l_A 164 DDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR-IWVATEGAG----- 236 (795)
T ss_dssp CSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE-EEEEEBSSC-----
T ss_pred eccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC-EEEEECCCC-----
Confidence 12 78888887776554 6665568999988776554321 245688888887775 444544333
Q ss_pred ccCccceeeEEEEeccccceEEEccC-------CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc---------
Q psy10063 546 TSTKVGKFDARFYHLIFEEEFARIKG-------HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS--------- 609 (894)
Q Consensus 546 ~~~~~~~~~v~vwd~~~~~~~~~l~~-------h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~--------- 609 (894)
|.+||...++....... ....|.+|...++|.+.+ |..+ -|.+|+...++...
T Consensus 237 ---------l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~ 305 (795)
T 4a2l_A 237 ---------LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENG 305 (795)
T ss_dssp ---------EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTT
T ss_pred ---------eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCC
Confidence 66777665544332211 235699999988887554 4444 58888876553210
Q ss_pred --CCCceeeeEECcCCcEEE-ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEe
Q psy10063 610 --EGSFTSSSTQQPDGLVYP-SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHV 686 (894)
Q Consensus 610 --~~~~v~~~~~spdg~~l~-~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~ 686 (894)
....+.++...++|.+.. +.++.+..+..... .+.... ......
T Consensus 306 ~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~-----------------~~~~~~------------~~~~~~---- 352 (795)
T 4a2l_A 306 SLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRN-----------------RFKNIR------------NIPYKN---- 352 (795)
T ss_dssp SCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGG-----------------SSEEEC------------CCTTSS----
T ss_pred CCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcc-----------------cceEEc------------CCCCCC----
Confidence 123455555555555442 22233333321100 000000 000000
Q ss_pred eccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCccee-cCCCCceEE
Q psy10063 687 NPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPIL-AGPVDIGFK 765 (894)
Q Consensus 687 ~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~-~~h~~~v~~ 765 (894)
...... ...+....+|.++.- ... ..|..+....+............. ......|.+
T Consensus 353 -~l~~~~-------------V~~i~~d~~g~lWiG-t~~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~ 410 (795)
T 4a2l_A 353 -SLSDNV-------------VSCIVEDKDKNLWIG-TND-------GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKA 410 (795)
T ss_dssp -SCSCSS-------------EEEEEECTTSCEEEE-ESS-------SCEEEECTTTCCEEEECCC------CCSCSCEEE
T ss_pred -CCCCCe-------------eEEEEECCCCCEEEE-ECC-------CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEE
Confidence 000000 011112222222211 111 011111111111000000000000 012356889
Q ss_pred EeeCCCCCEEEEecCCCcEEEEEccCCceeeccc-------cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCccee
Q psy10063 766 MPEPPKREKLALALADKVSERYRDRKNKATAGFL-------LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEF 838 (894)
Q Consensus 766 la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~-------~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l 838 (894)
++..+++.+|.+|..++.|.+|+...++...-.. ..+.++....+|. |.++...+ |.+||.++++..
T Consensus 411 i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwigt~~G-----l~~~~~~~~~~~ 484 (795)
T 4a2l_A 411 VYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN-LWLGTLSA-----LVRFNPEQRSFT 484 (795)
T ss_dssp EEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC-EEEEESSC-----EEEEETTTTEEE
T ss_pred EEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC-EEEEecCc-----eeEEeCCCCeEE
Confidence 9988888867777777779999987665422111 1122333444454 44444432 899998876544
Q ss_pred eecc------CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcccc
Q psy10063 839 ARIK------GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYF 879 (894)
Q Consensus 839 ~~l~------gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~ 879 (894)
.... .+...|.+|...++|++.+... +| |.+|+.+.+.+
T Consensus 485 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G-l~~~~~~~~~~ 529 (795)
T 4a2l_A 485 TIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG-LSVFKQEGLDI 529 (795)
T ss_dssp ECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC-EEEEEEETTEE
T ss_pred EccccccccccCCceEEEEEECCCCCEEEEeC-Cc-eEEEeCCCCeE
Confidence 3221 1346799999999998776654 44 88888876654
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.04 E-value=4.5e-08 Score=117.60 Aligned_cols=204 Identities=13% Similarity=0.075 Sum_probs=119.6
Q ss_pred cceeeeeccCccEEEecC-CCeEEEEEecCCCC----------E-EEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEe
Q psy10063 380 VDRLNSMSPAARKLATNA-EPVVKMQVTDQSAK----------I-TSLLWGNLDQYIITGHAKGDICTWDLRMGRELESI 447 (894)
Q Consensus 380 ~~~~~~~s~dg~~l~~~~-~~~~~~~l~~H~~~----------V-~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l 447 (894)
..++...+.++++.+... .+.++..+..+... + ..+++ ++.+|++++.|+.|+.||.++|+.+..+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 345555566666666543 33444444322210 1 11222 4668899999999999999999998777
Q ss_pred cCC-CCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE-----CCCCEEEEEcCCCcEEEEEeCC--C-
Q psy10063 448 SGH-AKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS-----KDHTAKLFTTHDRQLLKTYTTE--R- 518 (894)
Q Consensus 448 ~~h-~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs-----~Dg~V~iwdl~~~~~~~~~~~~--~- 518 (894)
... .......+..+ ++ + .++.+++.++ .+|.|+.||+++|+++..+... .
T Consensus 148 ~~~~~~~~~~~~~~s----------------P~----v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p 206 (689)
T 1yiq_A 148 DTRADHKRSYTITGA----------------PR----V-VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDP 206 (689)
T ss_dssp ECCSCTTSCCBCCSC----------------CE----E-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCT
T ss_pred cCcCCCCCCccccCC----------------cE----E-ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCc
Confidence 643 11000000001 11 1 1333333222 3789999999999998877521 0
Q ss_pred -----------------------------CeeEEEEcCCCCEEEEEECCCCeEEEeccC-------ccceeeEEEEeccc
Q psy10063 519 -----------------------------PVNSAALSPILPHVVLGGGQEAREVTTTST-------KVGKFDARFYHLIF 562 (894)
Q Consensus 519 -----------------------------~v~~l~~spdg~~l~~~~~~~~~~v~~~~~-------~~~~~~v~vwd~~~ 562 (894)
....+++++++.+|+++..++.. |.... ....-.|..||.++
T Consensus 207 ~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~--w~~~~~~~~~gd~~y~~~v~AlD~~T 284 (689)
T 1yiq_A 207 KLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSL--WDPKWRSQAKGDNLFLSSIVAVNADT 284 (689)
T ss_dssp TSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEES--SCHHHHHTTCSCCTTTTEEEEEETTT
T ss_pred ccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCc--cccCCCCCCCCCceeeeeEEEEEccC
Confidence 01257899999999998876531 21100 00001388899999
Q ss_pred cceEEEccC--CC-------CCeEEEEEecCCC---EEEEEeCCCcEEEEECCCCccc
Q psy10063 563 EEEFARIKG--HF-------GPINSLAFHPDGK---SYASGGEDGFLISNTLSNGLDI 608 (894)
Q Consensus 563 ~~~~~~l~~--h~-------~~V~~l~~spdg~---~l~sgs~Dg~I~vwdl~~~~~~ 608 (894)
|+.+-.+.. |. ..+....+..+|+ .|+.++.+|.|+++|.++++.+
T Consensus 285 G~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 285 GEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 998876653 32 1122222333665 7889999999999999887644
No 227
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.04 E-value=4.8e-08 Score=109.81 Aligned_cols=188 Identities=11% Similarity=0.038 Sum_probs=118.2
Q ss_pred CccceeeeeccCccEEEecCCC-eEEE---------EEecCCCCEEEEEEccCCCEEEEecCCC--cEEEEecCCCeEEE
Q psy10063 378 LSVDRLNSMSPAARKLATNAEP-VVKM---------QVTDQSAKITSLLWGNLDQYIITGHAKG--DICTWDLRMGRELE 445 (894)
Q Consensus 378 ~~~~~~~~~s~dg~~l~~~~~~-~~~~---------~l~~H~~~V~~l~~spdg~~L~sgs~Dg--~I~iWd~~tg~~~~ 445 (894)
+.....++++++|++++..... .+++ .+........ ++|++++++|+++..++ .|.+|+...+....
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 3344566788888877665432 2221 1111122233 89999999999888766 78888887655433
Q ss_pred Ee---cC-CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE----EeCC
Q psy10063 446 SI---SG-HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT----YTTE 517 (894)
Q Consensus 446 ~l---~~-h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~----~~~~ 517 (894)
.+ .. ... .+.+++++|++..|+.+..++.|+.||+..+..... ....
T Consensus 209 ~~g~~~~~~~~-------------------------~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 209 RIGQLGSTFSG-------------------------KIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp EEEECCTTSCS-------------------------CCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSC
T ss_pred EeeeccchhcC-------------------------CcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCC
Confidence 33 11 222 567788888544555577788899999987764332 1112
Q ss_pred C-Ce-e-EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC---------------CCCeEEE
Q psy10063 518 R-PV-N-SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH---------------FGPINSL 579 (894)
Q Consensus 518 ~-~v-~-~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h---------------~~~V~~l 579 (894)
. .. . .++|+|++..|+++...... |++|+.... +..+.++ ......|
T Consensus 264 ~~~~P~~~ia~~p~~g~lyv~d~~~~~-------------I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gi 328 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDSNFYMSDQNLSS-------------VYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGM 328 (409)
T ss_dssp CCCSSCCEEEEETTTTEEEEEETTTTE-------------EEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEE
T ss_pred CCCCccccEEEeCCCCEEEEEeCCCCE-------------EEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEE
Confidence 1 12 3 99999977777776654432 555554422 2222222 2457899
Q ss_pred EEecCCCEEEEEe-CCCcEEEEECCCCc
Q psy10063 580 AFHPDGKSYASGG-EDGFLISNTLSNGL 606 (894)
Q Consensus 580 ~~spdg~~l~sgs-~Dg~I~vwdl~~~~ 606 (894)
+|+++|+++++-. .++.|++|++..+.
T Consensus 329 a~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 329 TVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp EECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred EEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 9999999777777 78899999976654
No 228
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.02 E-value=9.3e-08 Score=102.39 Aligned_cols=182 Identities=12% Similarity=0.090 Sum_probs=113.1
Q ss_pred CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063 408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD 487 (894)
Q Consensus 408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd 487 (894)
+...+.+++|+++|+++++. ++.|.+||.++++............ ...+.+++++++
T Consensus 52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~---------------------~~~~~di~~d~d 108 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKK---------------------NNRFNDGKVDPA 108 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCS---------------------SEEEEEEEECTT
T ss_pred CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCC---------------------CCCCCCEEECCC
Confidence 45789999999999965554 4579999998887543332211100 013556666666
Q ss_pred CCEEEEEEC---------CCCEEEEEcC-CCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063 488 ATMFITASK---------DHTAKLFTTH-DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF 557 (894)
Q Consensus 488 g~~L~sgs~---------Dg~V~iwdl~-~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v 557 (894)
|+++++... .....||.+. .++.............++|+||++.|+++...... |.+
T Consensus 109 G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~-------------i~~ 175 (297)
T 3g4e_A 109 GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYS-------------VDA 175 (297)
T ss_dssp SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTE-------------EEE
T ss_pred CCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCc-------------EEE
Confidence 665444322 1234555554 34444444444567899999999988777654321 555
Q ss_pred Eec--cccc-----eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEEC-cCCcE
Q psy10063 558 YHL--IFEE-----EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQ-PDGLV 625 (894)
Q Consensus 558 wd~--~~~~-----~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~s-pdg~~ 625 (894)
|++ ..+. .+..+..+.+.+..|+++++|.+.++...++.|.+|+.++++.+. ....+.+++|. |++..
T Consensus 176 ~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~ 255 (297)
T 3g4e_A 176 FDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSE 255 (297)
T ss_dssp EEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCE
T ss_pred EeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCE
Confidence 554 3332 223333445678899999999888887778889999998665432 12455666665 55543
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.02 E-value=7.9e-08 Score=106.25 Aligned_cols=115 Identities=9% Similarity=-0.010 Sum_probs=76.4
Q ss_pred EEEe--cCCCEEEEE-ECCCCEEEEEcCCC----cEEEEEe--------CCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063 482 MQFS--KDATMFITA-SKDHTAKLFTTHDR----QLLKTYT--------TERPVNSAALSPILPHVVLGGGQEAREVTTT 546 (894)
Q Consensus 482 l~~s--pdg~~L~sg-s~Dg~V~iwdl~~~----~~~~~~~--------~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~ 546 (894)
..++ .++++|+.. ..++.|.|+|+.+. ++++.++ +......+..+|+| .++++.++..
T Consensus 87 ~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~------ 159 (462)
T 2ece_A 87 PNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEE------ 159 (462)
T ss_dssp TTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETT------
T ss_pred cccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcC------
Confidence 3456 677776664 56788999999755 6777773 11355678889999 5555444310
Q ss_pred cCccceeeEEEEeccccceEEEccCC---CCCeEEEEEecCCCEEEEEe-------------------CCCcEEEEECCC
Q psy10063 547 STKVGKFDARFYHLIFEEEFARIKGH---FGPINSLAFHPDGKSYASGG-------------------EDGFLISNTLSN 604 (894)
Q Consensus 547 ~~~~~~~~v~vwd~~~~~~~~~l~~h---~~~V~~l~~spdg~~l~sgs-------------------~Dg~I~vwdl~~ 604 (894)
..+.-.|.++|.++++.+..+... ...-+.+.|+|+++.+++.. .+..|.+||+..
T Consensus 160 --g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 160 --GEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp --SCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred --CCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 011123889999999999888632 22345688999999888874 256788888765
Q ss_pred C
Q psy10063 605 G 605 (894)
Q Consensus 605 ~ 605 (894)
+
T Consensus 238 ~ 238 (462)
T 2ece_A 238 R 238 (462)
T ss_dssp T
T ss_pred C
Confidence 4
No 230
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.99 E-value=8.7e-06 Score=99.73 Aligned_cols=180 Identities=7% Similarity=0.059 Sum_probs=117.0
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCC------CCCCeeEEEEcCCCCEEEEEeCCCCc------
Q psy10063 409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGH------AKEPINDMQFSKDATMFITASHSQAV------ 476 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h------~~~~V~~v~~spdg~~la~~~~d~~i------ 476 (894)
...|.++...++|.+.+. ..++-|.+||..+++........ ....|.++...++|.+.+.. ..|-.
T Consensus 214 ~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~Gl~~~~~~~ 291 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVA-TEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FNDLNIYHEGT 291 (795)
T ss_dssp CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SSCEEEEETTT
T ss_pred CCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CChhheEcCCC
Confidence 467889988888765554 43434899998877654432211 12268999998888765533 22211
Q ss_pred ------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-------CCCCeeEEEEcCCCCE
Q psy10063 477 ------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-------TERPVNSAALSPILPH 531 (894)
Q Consensus 477 ------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-------~~~~v~~l~~spdg~~ 531 (894)
..|.+|...++|. |..|+.++-|.+|+...++...... ....|.+++...+|.
T Consensus 292 ~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~- 369 (795)
T 4a2l_A 292 DSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN- 369 (795)
T ss_dssp TEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-
T ss_pred CeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-
Confidence 3588888888877 4557777779999876554332211 134689999988876
Q ss_pred EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc--------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063 532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK--------GHFGPINSLAFHPDGKSYASGGEDGFLISNTLS 603 (894)
Q Consensus 532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~--------~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~ 603 (894)
|.+|..++. |.+|+...++...... .....|.+++..++|+.|..|..++.|.+|+.+
T Consensus 370 lWiGt~~~G--------------l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 370 LWIGTNDGG--------------LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp EEEEESSSC--------------EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred EEEEECCCC--------------eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence 555666644 6666666554433221 123579999998888856677777779999987
Q ss_pred CCc
Q psy10063 604 NGL 606 (894)
Q Consensus 604 ~~~ 606 (894)
.++
T Consensus 436 ~~~ 438 (795)
T 4a2l_A 436 SGQ 438 (795)
T ss_dssp TCC
T ss_pred CCc
Confidence 653
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.98 E-value=1.3e-11 Score=137.23 Aligned_cols=142 Identities=12% Similarity=0.111 Sum_probs=77.7
Q ss_pred CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCC
Q psy10063 420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHT 499 (894)
Q Consensus 420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~ 499 (894)
++.+|++++.||.|+.||..+|+.+..+.. + .+.+..+..++.++++++.||.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~-------------------------~~~s~p~~~~g~~~v~~s~dg~ 60 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--D-------------------------PVLQVPTHVEEPAFLPDPNDGS 60 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--C-------------------------CSCCCC-----CCEEECTTTCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--C-------------------------CceecceEcCCCEEEEeCCCCE
Confidence 578999999999999999999999888776 3 2333334456777777789999
Q ss_pred EEEEEcCCCcEEEEEeCCC--Cee-EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCe
Q psy10063 500 AKLFTTHDRQLLKTYTTER--PVN-SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI 576 (894)
Q Consensus 500 V~iwdl~~~~~~~~~~~~~--~v~-~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V 576 (894)
|+.||.++|+.+..+..+. .+. +.++. ++..|++++.++. |+.||.++|+.+..+..+.
T Consensus 61 l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~--------------v~a~D~~tG~~~w~~~~~~--- 122 (369)
T 2hz6_A 61 LYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDI--------------WYVIDLLTGEKQQTLSSAF--- 122 (369)
T ss_dssp EEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEE--------------EEEECCC---------------
T ss_pred EEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCE--------------EEEEECCCCcEEEEecCCC---
Confidence 9999999998876665321 111 11111 3445666665554 8889999898887766543
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCcc
Q psy10063 577 NSLAFHPDGKSYASGGEDGFLISNTLSNGLD 607 (894)
Q Consensus 577 ~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~ 607 (894)
.+.++|++..|++++.|+.|+.||.++++.
T Consensus 123 -~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 123 -ADSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp -----------EEEEEEEEEEECCCSSSSSC
T ss_pred -cccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 234566888899999999999999877653
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.97 E-value=4.2e-11 Score=133.01 Aligned_cols=104 Identities=11% Similarity=0.040 Sum_probs=63.2
Q ss_pred CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceE
Q psy10063 487 DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566 (894)
Q Consensus 487 dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~ 566 (894)
++.+|++++.||.|+.||.++|+++..+.. +.+.+..+..++..+++++.++. |+.||.++|+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~--------------l~a~d~~tG~~~ 72 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGS--------------LYTLGSKNNEGL 72 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCC--------------EEEC-----CCS
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCE--------------EEEEECCCCcee
Confidence 577899999999999999999999988887 66666667777877777677776 777888777766
Q ss_pred EEccCCCC-CeE-EEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063 567 ARIKGHFG-PIN-SLAFHPDGKSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 567 ~~l~~h~~-~V~-~l~~spdg~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
..+..+.. .+. +..+. ++..|++++.|+.|+.||.++++
T Consensus 73 w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 73 TKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGE 113 (369)
T ss_dssp EECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC---
T ss_pred eeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCc
Confidence 55543321 110 11111 34567778888899999987665
No 233
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.96 E-value=1.7e-07 Score=103.78 Aligned_cols=107 Identities=8% Similarity=-0.051 Sum_probs=76.4
Q ss_pred CCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc-CCCCCeeE
Q psy10063 772 REKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK-GHFGPINS 850 (894)
Q Consensus 772 g~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~-gH~~~V~~ 850 (894)
+..|++++.++.|..+|..+++.+....... ......++..++++..++ .|+.+|.++|+.+.... .+...+..
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~~~~~l~~~~~~g----~l~~~d~~tG~~~w~~~~~~~~~~~~ 313 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDFIVDGNRIYLVDQND----RVMALTIDGGVTLWTQSDLLHRLLTS 313 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEEEEETTEEEEEETTC----CEEEEETTTCCEEEEECTTTTSCCCC
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCceEECCEEEEEcCCC----eEEEEECCCCcEEEeecccCCCcccC
Confidence 4567777788999999999888776554332 223444577777777665 49999999998876655 22223333
Q ss_pred EEEeeCCcEEEEecCCCcEEEEecCcccccccccc
Q psy10063 851 LAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDI 885 (894)
Q Consensus 851 l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~ 885 (894)
+.+. +..|+.++.+|.|++||.+.++++..+++
T Consensus 314 ~~~~--~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 314 PVLY--NGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp CEEE--TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CEEE--CCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 3332 56788888999999999999998887776
No 234
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.96 E-value=3.7e-08 Score=108.02 Aligned_cols=188 Identities=11% Similarity=-0.004 Sum_probs=117.8
Q ss_pred cCCCCEEEEEEccCCCEEEEecC-----CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063 407 DQSAKITSLLWGNLDQYIITGHA-----KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND 481 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sgs~-----Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~ 481 (894)
+|...+.+|+|+++|+++++-.. ++.|.+||+.+++.++.+..... .. +.+ ..+..
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~-~~------~~~------------~~~~~ 124 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP-IT------LSN------------SFVND 124 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT-TS------CTT------------CCCCE
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh-hc------ccc------------cccce
Confidence 45678999999999986665433 57899999999998777754321 00 000 03456
Q ss_pred EEEecCCCEE-EEEE---CCCCEEEEEcCCCcEEEEEeC------------------------------CCCeeEEEEcC
Q psy10063 482 MQFSKDATMF-ITAS---KDHTAKLFTTHDRQLLKTYTT------------------------------ERPVNSAALSP 527 (894)
Q Consensus 482 l~~spdg~~L-~sgs---~Dg~V~iwdl~~~~~~~~~~~------------------------------~~~v~~l~~sp 527 (894)
|++++++.++ ++.. .++.|.+||+.+++..+.+.. ...+..|+|+|
T Consensus 125 v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~ 204 (343)
T 2qe8_A 125 LAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA 204 (343)
T ss_dssp EEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT
T ss_pred EEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc
Confidence 6666644333 3333 467788888877766554422 02357899999
Q ss_pred CCCEEEEEECCCCeEEEeccCccceeeEEEEecc---c-----cceEE--EccCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy10063 528 ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI---F-----EEEFA--RIKGHFGPINSLAFHPDGKSYASGGEDGFL 597 (894)
Q Consensus 528 dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~---~-----~~~~~--~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I 597 (894)
||+.|+++...+. . |..++.. . ++... ...++.+....|+++++|.++++...++.|
T Consensus 205 dg~~ly~~~~~~~-~------------l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V 271 (343)
T 2qe8_A 205 ENEWLYLSPMHST-S------------MYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAI 271 (343)
T ss_dssp TSCEEEEEESSCS-E------------EEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEE
T ss_pred CCCEEEEEeCCCC-e------------EEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeE
Confidence 9999999887664 2 2233221 0 00000 111344456789999999999988889999
Q ss_pred EEEECCCCccc--c---CCCceeeeEECcCCcEE
Q psy10063 598 ISNTLSNGLDI--S---EGSFTSSSTQQPDGLVY 626 (894)
Q Consensus 598 ~vwdl~~~~~~--~---~~~~v~~~~~spdg~~l 626 (894)
.+|+.+.++.. . ....+..+++.++|.++
T Consensus 272 ~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~ 305 (343)
T 2qe8_A 272 GVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLY 305 (343)
T ss_dssp EEEETTTTEEEEEEECGGGSCEEEEEECTTSCEE
T ss_pred EEEECCCCCEEEEEECCceecCCeeEECCCCcEE
Confidence 99998444311 1 13345566666666544
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.94 E-value=1.4e-08 Score=110.09 Aligned_cols=108 Identities=6% Similarity=-0.150 Sum_probs=65.7
Q ss_pred eEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccC---CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee
Q psy10063 763 GFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLS---CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA 839 (894)
Q Consensus 763 v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~---~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~ 839 (894)
+.++++.+++. |.+++.++.|..++. .++.+..+... ...+++..++ .|+++..++ .|+.+|. .++.+.
T Consensus 217 ~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~g----gl~~~d~-~g~~~~ 288 (330)
T 3hxj_A 217 VTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDG----HLYAINP-DGTEKW 288 (330)
T ss_dssp CSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTC----EEEEECT-TSCEEE
T ss_pred eeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCC----CEEEECC-CCcEEE
Confidence 45566666654 445556677777763 44444333322 1233444344 566666554 4899996 677776
Q ss_pred eccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcccc
Q psy10063 840 RIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYF 879 (894)
Q Consensus 840 ~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~ 879 (894)
.+......+.++.+..+|+ |..++.+|.|++...+..+.
T Consensus 289 ~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~~ 327 (330)
T 3hxj_A 289 NFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEHHH 327 (330)
T ss_dssp EEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC-----
T ss_pred EEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecccccc
Confidence 6666666788888888887 55578899999888765543
No 236
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.93 E-value=2.6e-08 Score=120.19 Aligned_cols=207 Identities=9% Similarity=0.052 Sum_probs=132.4
Q ss_pred eeeeccCccEEEecC----CCeEEEE---------EecCCCCE--EEEEEccCCCEEEEecCCC-------------cEE
Q psy10063 383 LNSMSPAARKLATNA----EPVVKMQ---------VTDQSAKI--TSLLWGNLDQYIITGHAKG-------------DIC 434 (894)
Q Consensus 383 ~~~~s~dg~~l~~~~----~~~~~~~---------l~~H~~~V--~~l~~spdg~~L~sgs~Dg-------------~I~ 434 (894)
..+|||||++|+... .....+. +..+...+ .+++|+ ||+.|+.++.+. .|+
T Consensus 133 ~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~ 211 (693)
T 3iuj_A 133 QLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVY 211 (693)
T ss_dssp EEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEE
T ss_pred EEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEE
Confidence 347999999998532 2112211 11122223 578999 999999887774 399
Q ss_pred EEecCCCeE--EEEec--C-CCCCCeeEEEEcCCCCEEEEEeCCC----Cc-------------------cceEEEEEec
Q psy10063 435 TWDLRMGRE--LESIS--G-HAKEPINDMQFSKDATMFITASHSQ----AV-------------------EPINDMQFSK 486 (894)
Q Consensus 435 iWd~~tg~~--~~~l~--~-h~~~~V~~v~~spdg~~la~~~~d~----~i-------------------~~V~~l~~sp 486 (894)
+|++.++.. +..+. . |.. .+..+.|+|||++|+.....+ .+ ..+... |++
T Consensus 212 ~~~lgt~~~~~~~v~~~~~~~~~-~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~ 289 (693)
T 3iuj_A 212 FHRLGTAQEDDRLVFGAIPAQHH-RYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDN 289 (693)
T ss_dssp EEETTSCGGGCEEEESCSGGGCC-SEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEE
T ss_pred EEECCCCcccceEEEecCCCCCe-EEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Eec
Confidence 999987642 23333 3 343 678999999999987654322 11 112222 566
Q ss_pred CCCEEEEEEC-C---CCEEEEEcCCCcE---EEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063 487 DATMFITASK-D---HTAKLFTTHDRQL---LKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 487 dg~~L~sgs~-D---g~V~iwdl~~~~~---~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
+|..|+..+. + +.|.+||+..+.. ...+.+...+. .|++++++|++...++.. ..|++|+
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~-----------~~l~~~d 356 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDAT-----------ARVEQFD 356 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTE-----------EEEEEEC
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCe-----------eEEEEEE
Confidence 6666655543 3 5799999988764 33344444454 899999999887765542 2378888
Q ss_pred ccccceEEEcc-CCCCCeEEEEEecCCCEEEEEeCC----CcEEEEECCCCc
Q psy10063 560 LIFEEEFARIK-GHFGPINSLAFHPDGKSYASGGED----GFLISNTLSNGL 606 (894)
Q Consensus 560 ~~~~~~~~~l~-~h~~~V~~l~~spdg~~l~sgs~D----g~I~vwdl~~~~ 606 (894)
+..+ ..+.+. .+.+.+..+.++++++.|+....+ +.|++||+..++
T Consensus 357 ~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 357 YEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp TTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred CCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 8744 444443 344567788888888866655444 789999987764
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.92 E-value=1.2e-06 Score=92.03 Aligned_cols=112 Identities=7% Similarity=-0.025 Sum_probs=69.6
Q ss_pred ceEEEEEecCCCEEEEEE-CCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063 478 PINDMQFSKDATMFITAS-KDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA 555 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs-~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v 555 (894)
.+.+++|++++..|+.+. ..+.|.++++..+.....+... .....+++++++..|+++...... |
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~-------------I 103 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDR-------------I 103 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTE-------------E
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCE-------------E
Confidence 467888888665555544 5678999998766554444333 578999999988888887765432 5
Q ss_pred EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC---CcEEEEEC
Q psy10063 556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED---GFLISNTL 602 (894)
Q Consensus 556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D---g~I~vwdl 602 (894)
.++++........+.........+++++++.+|+.+... +.|.++++
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~ 153 (267)
T 1npe_A 104 EVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (267)
T ss_dssp EEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred EEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence 666665322221222222456788898876665555432 34544443
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.92 E-value=1.1e-07 Score=105.17 Aligned_cols=209 Identities=12% Similarity=0.086 Sum_probs=134.2
Q ss_pred cCCCEEEE-ecCCCcEEEEecCCC----eEEEEec------CCCCCCeeEEEEcCCCCEEEEEeCC------CCc-----
Q psy10063 419 NLDQYIIT-GHAKGDICTWDLRMG----RELESIS------GHAKEPINDMQFSKDATMFITASHS------QAV----- 476 (894)
Q Consensus 419 pdg~~L~s-gs~Dg~I~iWd~~tg----~~~~~l~------~h~~~~V~~v~~spdg~~la~~~~d------~~i----- 476 (894)
+++++|+. |..++.|.|+|+.+. +.++.++ .........+..+|+| +++++..+ +.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 78887665 566788999999765 7777773 1111145667888999 55544333 112
Q ss_pred ----------------cceEEEEEecCCCEEEEEE-------------------CCCCEEEEEcCCCcEEEEEeCC---C
Q psy10063 477 ----------------EPINDMQFSKDATMFITAS-------------------KDHTAKLFTTHDRQLLKTYTTE---R 518 (894)
Q Consensus 477 ----------------~~V~~l~~spdg~~L~sgs-------------------~Dg~V~iwdl~~~~~~~~~~~~---~ 518 (894)
..-+.+.|+|+++.+++.. .+..|.+||+.++++++.+... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 1234578899999888874 3688999999999999988864 3
Q ss_pred CeeEEEE--cCCCCEEEEEEC-----C-CCeEEEeccCccceee-EEEEeccccceEEEcc-------CCCCCeEEEEEe
Q psy10063 519 PVNSAAL--SPILPHVVLGGG-----Q-EAREVTTTSTKVGKFD-ARFYHLIFEEEFARIK-------GHFGPINSLAFH 582 (894)
Q Consensus 519 ~v~~l~~--spdg~~l~~~~~-----~-~~~~v~~~~~~~~~~~-v~vwd~~~~~~~~~l~-------~h~~~V~~l~~s 582 (894)
....|.| +|+|+++++++. . +.+.+|..+. +.|. +++.|+...+....+. +-......|.++
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~--g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED--GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET--TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC--CceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 4455656 999999999885 3 4555555543 3332 3444444322211111 002457889999
Q ss_pred cCCCEEEEEeC-CCcEEEEECCCCc---c---ccCC-----------C----ceeeeEECcCCcEEEecC
Q psy10063 583 PDGKSYASGGE-DGFLISNTLSNGL---D---ISEG-----------S----FTSSSTQQPDGLVYPSQG 630 (894)
Q Consensus 583 pdg~~l~sgs~-Dg~I~vwdl~~~~---~---~~~~-----------~----~v~~~~~spdg~~l~~~~ 630 (894)
+||++|+++.. .+.|.+||+.... . +..+ . ....+.++|||+++....
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999887764 6789999986332 1 1112 1 356677777777664443
No 239
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.91 E-value=6.3e-07 Score=97.33 Aligned_cols=158 Identities=11% Similarity=0.018 Sum_probs=100.4
Q ss_pred CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063 408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD 487 (894)
Q Consensus 408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd 487 (894)
+...|.+++|+++|+++++. .+ .|.+||..+++.......... .....+.+++++++
T Consensus 88 ~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~---------------------~~~~~~~~i~~d~~ 144 (326)
T 2ghs_A 88 LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESD---------------------LPGNRSNDGRMHPS 144 (326)
T ss_dssp CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTT---------------------CTTEEEEEEEECTT
T ss_pred CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCC---------------------CCCCCCCCEEECCC
Confidence 35689999999999877765 34 499999988875433221110 00014566777777
Q ss_pred CCEEEEEEC------CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063 488 ATMFITASK------DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI 561 (894)
Q Consensus 488 g~~L~sgs~------Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~ 561 (894)
|+++++... .+.|..++ +++.............++|++||+.|+++..... .|.+|++.
T Consensus 145 G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~-------------~I~~~d~~ 209 (326)
T 2ghs_A 145 GALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVN-------------RLMRVPLD 209 (326)
T ss_dssp SCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTC-------------EEEEEEBC
T ss_pred CCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCC-------------EEEEEEcc
Confidence 765554432 23444445 5555443333456789999999998887765432 15666654
Q ss_pred --cc-c-----eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063 562 --FE-E-----EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS 603 (894)
Q Consensus 562 --~~-~-----~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~ 603 (894)
.+ + .+..+..+...+.+++++++|.++++...++.|.+|+..
T Consensus 210 ~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 210 ARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp TTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred cccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 34 2 222333345567889999999887777677889999984
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.90 E-value=1.3e-07 Score=113.13 Aligned_cols=67 Identities=10% Similarity=0.090 Sum_probs=53.0
Q ss_pred eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063 826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP 893 (894)
Q Consensus 826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp 893 (894)
.|+.||+.+|+.+-++..+ .++....+...+.+|+.++.||.|++||.+.++.+.++++...+...|
T Consensus 439 ~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p 505 (668)
T 1kv9_A 439 ALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAP 505 (668)
T ss_dssp EEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred eEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCc
Confidence 5999999999988766543 334445666778889999999999999999999999998876555443
No 241
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.87 E-value=3.6e-07 Score=107.15 Aligned_cols=66 Identities=9% Similarity=-0.050 Sum_probs=49.9
Q ss_pred eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccC
Q psy10063 826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQ 892 (894)
Q Consensus 826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~q 892 (894)
.|+.||+.+|+.+-++... ..+....+...+.+|+.++.||.|++||.+.++.+.++++...+...
T Consensus 445 ~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~ 510 (571)
T 2ad6_A 445 QIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGS 510 (571)
T ss_dssp EEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred eEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEee
Confidence 6999999999988766532 23334444555667777999999999999999999999877655443
No 242
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.87 E-value=0.00022 Score=86.93 Aligned_cols=210 Identities=9% Similarity=0.029 Sum_probs=123.3
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC----C--CCCCeeEEEEcC--CCCEEEEEeCCCCc-----
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG----H--AKEPINDMQFSK--DATMFITASHSQAV----- 476 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~----h--~~~~V~~v~~sp--dg~~la~~~~d~~i----- 476 (894)
..|.+|....+|..|..|..++-|.+||..+++....... . ....|.+|.... +|.+.+.....+-.
T Consensus 66 n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~ 145 (781)
T 3v9f_A 66 NELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIA 145 (781)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEEETT
T ss_pred cccceEEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEEECC
Confidence 3599999888887466677775699999987775433111 0 112588888777 66544432122110
Q ss_pred -----------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--------CCCCeeEEEEcCCCCE
Q psy10063 477 -----------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--------TERPVNSAALSPILPH 531 (894)
Q Consensus 477 -----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--------~~~~v~~l~~spdg~~ 531 (894)
..|.+|....+|.+. .+..++-|..||...++...... ....|.+|....+|.+
T Consensus 146 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l 224 (781)
T 3v9f_A 146 TGKFTHYNKSTVPALPSEQTWTATEAEDGKLY-IGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNI 224 (781)
T ss_dssp TTEEEEESTTTCTTCSCCCEEEEEEEETTEEE-EEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCE
T ss_pred CCeEEeeccCcccCCCccceEEEEECCCCCEE-EEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCE
Confidence 236677766666544 46666568899988776543211 1346888888888765
Q ss_pred EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc-------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063 532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK-------GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~-------~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~ 604 (894)
.+ +...| |.+||...++...... .....|.+|....+|. |..|...+-|.+++...
T Consensus 225 wi-gt~~G---------------l~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 225 WI-GTSKG---------------LALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQ 287 (781)
T ss_dssp EE-EETTE---------------EEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTC
T ss_pred EE-EeCCc---------------HheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCC
Confidence 54 44443 6667765544322111 1235689999888776 45556645688888766
Q ss_pred Cccc------------------cCCCceeeeEECcCCcEE-EecCCeEEEEe
Q psy10063 605 GLDI------------------SEGSFTSSSTQQPDGLVY-PSQGGHIHSLS 637 (894)
Q Consensus 605 ~~~~------------------~~~~~v~~~~~spdg~~l-~~~~g~i~~~~ 637 (894)
.+.. .....+.++....+|.+. .+.++.+..+.
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~ 339 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFIS 339 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEEC
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeC
Confidence 5311 112346667777777655 44355555554
No 243
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.86 E-value=5.8e-07 Score=105.38 Aligned_cols=67 Identities=15% Similarity=0.132 Sum_probs=49.1
Q ss_pred eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063 826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP 893 (894)
Q Consensus 826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp 893 (894)
.|+.||+.+|+.+-+.... .++..-.+.-.+.+|+.++.||.|+.||.++++.+.+++++..+...|
T Consensus 454 ~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P 520 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYP 520 (599)
T ss_dssp EEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred eEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEecc
Confidence 5899999999887655421 222222234456778889999999999999999999998876665544
No 244
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.79 E-value=3.4e-06 Score=98.83 Aligned_cols=171 Identities=13% Similarity=0.073 Sum_probs=104.5
Q ss_pred EEEEccCCCE----EEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE-EEEecCC
Q psy10063 414 SLLWGNLDQY----IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND-MQFSKDA 488 (894)
Q Consensus 414 ~l~~spdg~~----L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~-l~~spdg 488 (894)
.++++|++.. |+.++.|+.|+.+|.++|+.+-++..... . .+. .+.+ ..+ -++
T Consensus 110 g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~-~--------~~~------------~~~ssP~v-~~g 167 (599)
T 1w6s_A 110 GLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDI-K--------VGS------------TLTIAPYV-VKD 167 (599)
T ss_dssp CCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCG-G--------GTC------------BCCSCCEE-ETT
T ss_pred ceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCC-C--------ccc------------eeecCCEE-ECC
Confidence 3566554444 88898999999999999998876653221 0 000 0100 011 133
Q ss_pred CEEEEEE------CCCCEEEEEcCCCcEEEEEeCCCCe---------------------------------------eEE
Q psy10063 489 TMFITAS------KDHTAKLFTTHDRQLLKTYTTERPV---------------------------------------NSA 523 (894)
Q Consensus 489 ~~L~sgs------~Dg~V~iwdl~~~~~~~~~~~~~~v---------------------------------------~~l 523 (894)
.|++++ .+|.|+.+|.++|+++..+...... ..+
T Consensus 168 -~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~ 246 (599)
T 1w6s_A 168 -KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWY 246 (599)
T ss_dssp -EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCC
T ss_pred -EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccce
Confidence 344443 3789999999999999887753221 145
Q ss_pred EEcCCCCEEEEEECCCCeEEEeccCccc----eeeEEEEeccccceEEEccC--CCCC----e---EEEEEe-cCC---C
Q psy10063 524 ALSPILPHVVLGGGQEAREVTTTSTKVG----KFDARFYHLIFEEEFARIKG--HFGP----I---NSLAFH-PDG---K 586 (894)
Q Consensus 524 ~~spdg~~l~~~~~~~~~~v~~~~~~~~----~~~v~vwd~~~~~~~~~l~~--h~~~----V---~~l~~s-pdg---~ 586 (894)
++.++..+|+++..+... |......+ .-.|..+|.++|+.+-.++. |... + .-+... .+| +
T Consensus 247 a~d~~~g~vy~g~g~~~p--~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~ 324 (599)
T 1w6s_A 247 AYDPGTNLIYFGTGNPAP--WNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARK 324 (599)
T ss_dssp EEETTTTEEEEECCCCSC--SCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEE
T ss_pred eEeCCCCEEEEeCCCCcc--ccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEE
Confidence 677788888888776421 21111000 11377888888888766543 2211 1 112222 467 4
Q ss_pred EEEEEeCCCcEEEEECCCCcccc
Q psy10063 587 SYASGGEDGFLISNTLSNGLDIS 609 (894)
Q Consensus 587 ~l~sgs~Dg~I~vwdl~~~~~~~ 609 (894)
.|+.++.+|.|+++|.++++.+.
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEE
T ss_pred EEEEECCCcEEEEEECCCCCEee
Confidence 67778899999999999888664
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.77 E-value=4.3e-06 Score=100.01 Aligned_cols=165 Identities=15% Similarity=0.122 Sum_probs=103.1
Q ss_pred CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE----
Q psy10063 420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS---- 495 (894)
Q Consensus 420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs---- 495 (894)
++.+|+.++.|+.|+.+|.++|+.+.++..........+..+ ++ + .++ .|+.+.
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~----------------P~----v-~~~-~v~vg~~~~~ 173 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGA----------------PR----V-VKG-KVIIGNGGAE 173 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSC----------------CE----E-ETT-EEEECCBCTT
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCC----------------CE----E-ECC-EEEEeCCCCC
Confidence 356888888999999999999999887765321000000000 11 1 133 344433
Q ss_pred --CCCCEEEEEcCCCcEEEEEeCC--CC------------------------------eeEEEEcCCCCEEEEEECCCCe
Q psy10063 496 --KDHTAKLFTTHDRQLLKTYTTE--RP------------------------------VNSAALSPILPHVVLGGGQEAR 541 (894)
Q Consensus 496 --~Dg~V~iwdl~~~~~~~~~~~~--~~------------------------------v~~l~~spdg~~l~~~~~~~~~ 541 (894)
.+|.|+.||+++|+++..+... .+ ...+++.+++.+|+++..++..
T Consensus 174 ~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~ 253 (668)
T 1kv9_A 174 YGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSP 253 (668)
T ss_dssp TCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEES
T ss_pred cCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCc
Confidence 2588999999999999887631 10 1246888888889888766531
Q ss_pred EEEeccC-------ccceeeEEEEeccccceEEEccC--CC-------CCeEEEEEecCCC---EEEEEeCCCcEEEEEC
Q psy10063 542 EVTTTST-------KVGKFDARFYHLIFEEEFARIKG--HF-------GPINSLAFHPDGK---SYASGGEDGFLISNTL 602 (894)
Q Consensus 542 ~v~~~~~-------~~~~~~v~vwd~~~~~~~~~l~~--h~-------~~V~~l~~spdg~---~l~sgs~Dg~I~vwdl 602 (894)
|.... ....-.|..+|..+|+.+-.+.. |. ..+....+..+|+ .|+.++.+|.|+++|.
T Consensus 254 --w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~ 331 (668)
T 1kv9_A 254 --WNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDR 331 (668)
T ss_dssp --SCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEET
T ss_pred --cccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEEC
Confidence 21100 00001378889999988776643 32 2223333334675 6889999999999999
Q ss_pred CCCccc
Q psy10063 603 SNGLDI 608 (894)
Q Consensus 603 ~~~~~~ 608 (894)
++++.+
T Consensus 332 ~tG~~l 337 (668)
T 1kv9_A 332 TNGKLI 337 (668)
T ss_dssp TTCCEE
T ss_pred CCCCEe
Confidence 888754
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.75 E-value=2.6e-07 Score=105.63 Aligned_cols=177 Identities=8% Similarity=0.053 Sum_probs=129.4
Q ss_pred EEEEcc-----CCCEEEEecC-CCcEEEEecCCCeEEEEecCCCCCCeeEEEE-c-CCCCEEEEEeCC-------CCc--
Q psy10063 414 SLLWGN-----LDQYIITGHA-KGDICTWDLRMGRELESISGHAKEPINDMQF-S-KDATMFITASHS-------QAV-- 476 (894)
Q Consensus 414 ~l~~sp-----dg~~L~sgs~-Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~-s-pdg~~la~~~~d-------~~i-- 476 (894)
.+.+|. ||++|+.... +..|.+.|+++.++.+.+.--.+..+..++| + |++++++++++. +..
T Consensus 89 h~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~ 168 (595)
T 1fwx_A 89 HVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNME 168 (595)
T ss_dssp CEEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTT
T ss_pred ccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccc
Confidence 355565 8998887755 4579999999999988665332236889998 5 999999888632 211
Q ss_pred --------------------------cceEEEEEecCCCEEEEEECCC--------------------------------
Q psy10063 477 --------------------------EPINDMQFSKDATMFITASKDH-------------------------------- 498 (894)
Q Consensus 477 --------------------------~~V~~l~~spdg~~L~sgs~Dg-------------------------------- 498 (894)
+....++++|||+++++.+.+.
T Consensus 169 ~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~G 248 (595)
T 1fwx_A 169 DVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAG 248 (595)
T ss_dssp CGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHT
T ss_pred cccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCC
Confidence 1124578899999999988653
Q ss_pred ------CEEEEEcCC--CcE-EEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc-----
Q psy10063 499 ------TAKLFTTHD--RQL-LKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE----- 564 (894)
Q Consensus 499 ------~V~iwdl~~--~~~-~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~----- 564 (894)
.|.|.|.++ ++. +..+.......++.++|||+++++++..... |.++|+...+
T Consensus 249 k~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~-------------VsVid~~~~~~~~~~ 315 (595)
T 1fwx_A 249 DYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPT-------------VTVLDVTRFDAVFYE 315 (595)
T ss_dssp CSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSB-------------EEEEEGGGHHHHHHS
T ss_pred CeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCe-------------EEEEECccccccccc
Confidence 478888887 555 6677666778899999999999998865542 7888887553
Q ss_pred -------eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063 565 -------EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 565 -------~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~ 604 (894)
.+..+. -......++|+++|...++.-.|+.|.+|+++.
T Consensus 316 ~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 316 NADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 233332 234578999999994445666799999999976
No 247
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.73 E-value=4.5e-06 Score=97.91 Aligned_cols=67 Identities=15% Similarity=0.205 Sum_probs=50.4
Q ss_pred eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063 826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP 893 (894)
Q Consensus 826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp 893 (894)
.|+.||+.+|+.+-++..+. ++..-.+...+.+|+.++.||.|+.||.++++.+.+++++..+...|
T Consensus 467 ~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P 533 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPP 533 (582)
T ss_dssp EEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred eEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCc
Confidence 58999999999886655332 23222333456778889999999999999999999999877666554
No 248
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.73 E-value=0.00062 Score=80.29 Aligned_cols=182 Identities=6% Similarity=-0.098 Sum_probs=113.6
Q ss_pred CCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeC----------CCCc-
Q psy10063 409 SAKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------SQAV- 476 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~----------d~~i- 476 (894)
-..+.+|+|++++..|+.+ ..++.|+.+++........+..... ....|++...+..|..+.. +|..
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~-~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD-YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR 114 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC-CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE
Confidence 4568899999976666654 4568899999875544333433222 5677888766555544332 2221
Q ss_pred --------cceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063 477 --------EPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTT 546 (894)
Q Consensus 477 --------~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~ 546 (894)
.....|++.|...+|+.... .+.|...++........+..-.....|++++++++|+.+......
T Consensus 115 ~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~----- 189 (628)
T 4a0p_A 115 QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNL----- 189 (628)
T ss_dssp EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTE-----
T ss_pred EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCE-----
Confidence 34578899986556665553 456777777654444444445678999999999999988776542
Q ss_pred cCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063 547 STKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 547 ~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
|..+++..... ..+........+|++.. +.++++-...+.|...|...++
T Consensus 190 --------I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 190 --------IESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp --------EEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred --------EEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 66666654332 23333344556788764 3444444456778888865554
No 249
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.71 E-value=1.8e-06 Score=89.91 Aligned_cols=188 Identities=8% Similarity=0.007 Sum_probs=126.1
Q ss_pred CCEEEEEEccCCCEEEEecC--CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063 410 AKITSLLWGNLDQYIITGHA--KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD 487 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~--Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd 487 (894)
.....|+|++|+.++++.+. ++.|+++|+.+++.+..+..... . ....+++.
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~--~----------------------fgeGi~~~-- 74 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS--Y----------------------FGEGLTLL-- 74 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT--C----------------------CEEEEEEE--
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC--c----------------------ceEEEEEe--
Confidence 34789999999755555443 57999999999999888763222 0 12234443
Q ss_pred CCEEEE-EECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceE
Q psy10063 488 ATMFIT-ASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566 (894)
Q Consensus 488 g~~L~s-gs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~ 566 (894)
+..|+. .-.++.|.++|..+++.+..+... .-..+.+++||++|+++.+.+. |.++|.++.+.+
T Consensus 75 g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~--------------l~viD~~t~~v~ 139 (266)
T 2iwa_A 75 NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSI--------------LYEIDPHTFKLI 139 (266)
T ss_dssp TTEEEEEETTCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSE--------------EEEECTTTCCEE
T ss_pred CCEEEEEEecCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCe--------------EEEEECCCCcEE
Confidence 444444 446789999999999999998755 1223446678888888765543 888999888887
Q ss_pred EEccCC-----CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC-----------------CCceeeeEECcCCc
Q psy10063 567 ARIKGH-----FGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE-----------------GSFTSSSTQQPDGL 624 (894)
Q Consensus 567 ~~l~~h-----~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~-----------------~~~v~~~~~spdg~ 624 (894)
..+.-- ...+..+.|. +|+.++....++.|.+.|.++++.+.. ......+++.|++.
T Consensus 140 ~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~ 218 (266)
T 2iwa_A 140 KKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK 218 (266)
T ss_dssp EEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT
T ss_pred EEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCC
Confidence 776422 1246788888 776555555678999999998874321 12446788999886
Q ss_pred EEE-ec--CCeEEEEecc
Q psy10063 625 VYP-SQ--GGHIHSLSSH 639 (894)
Q Consensus 625 ~l~-~~--~g~i~~~~~~ 639 (894)
.+. +. .+.++.+...
T Consensus 219 ~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 219 RIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp EEEEEETTCSEEEEEEEE
T ss_pred EEEEECCCCCeEEEEEEe
Confidence 552 22 2455555543
No 250
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.69 E-value=0.00026 Score=83.38 Aligned_cols=183 Identities=6% Similarity=-0.077 Sum_probs=105.1
Q ss_pred CCCCEEEEEEccCCCEEEEec-CCCcEEEEecCCCeE-EEEecCCCCCCeeEEEEcCCCCEEEEEeCC-CCc--------
Q psy10063 408 QSAKITSLLWGNLDQYIITGH-AKGDICTWDLRMGRE-LESISGHAKEPINDMQFSKDATMFITASHS-QAV-------- 476 (894)
Q Consensus 408 H~~~V~~l~~spdg~~L~sgs-~Dg~I~iWd~~tg~~-~~~l~~h~~~~V~~v~~spdg~~la~~~~d-~~i-------- 476 (894)
..+.+.+|+|++.+..|+.+. ..+.|+.+++..... ...+..... ....|++.+.+..|..+... +.|
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~-~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL-SPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCC-CcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 445688999999777776654 457888899875532 233333323 78899999876666555432 222
Q ss_pred ----------cceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEE
Q psy10063 477 ----------EPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREV 543 (894)
Q Consensus 477 ----------~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v 543 (894)
.....|++.|.+.+|+.... .+.|...++........+. .-.....|++++++++|+.+......
T Consensus 117 ~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~-- 194 (619)
T 3s94_A 117 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF-- 194 (619)
T ss_dssp SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCC--
T ss_pred CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCe--
Confidence 34557888887666665553 3456655655333333332 23567899999998888888765432
Q ss_pred EeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECCCCc
Q psy10063 544 TTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLSNGL 606 (894)
Q Consensus 544 ~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~~~~ 606 (894)
|..+++........+.+......+|++..+ .|+.. ...+.|.+.|..+++
T Consensus 195 -----------I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 195 -----------IHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp -----------EEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEESSSCC
T ss_pred -----------EEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCc
Confidence 556665532222222222223356777544 45444 456778888887665
No 251
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.65 E-value=0.0013 Score=80.15 Aligned_cols=177 Identities=11% Similarity=0.049 Sum_probs=106.0
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC------CCCCCeeEEEEcCCCCEEEEEeCCCCc-------
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG------HAKEPINDMQFSKDATMFITASHSQAV------- 476 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~------h~~~~V~~v~~spdg~~la~~~~d~~i------- 476 (894)
..|.++...++|.+.+ |..++-|.+||...++....... .....|.+|....+|.+.+... .|-.
T Consensus 163 ~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~-~Gl~~~d~~~~ 240 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTS-KGLALFNANTE 240 (781)
T ss_dssp CCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEET-TEEEEEETTTT
T ss_pred cceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEeC-CcHheECCCCC
Confidence 5688888888776554 55554588999887765332111 1122688888888887655432 1211
Q ss_pred -----------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe---------------CCCCeeEEE
Q psy10063 477 -----------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---------------TERPVNSAA 524 (894)
Q Consensus 477 -----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---------------~~~~v~~l~ 524 (894)
..|.+|....+|. |..|...+-|.++|...++...... ....|.+|.
T Consensus 241 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~ 319 (781)
T 3v9f_A 241 TFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIF 319 (781)
T ss_dssp EEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEE
T ss_pred cEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEE
Confidence 2477777777776 4556665668899988766443221 134688999
Q ss_pred EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc---------cCCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063 525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI---------KGHFGPINSLAFHPDGKSYASGGEDG 595 (894)
Q Consensus 525 ~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l---------~~h~~~V~~l~~spdg~~l~sgs~Dg 595 (894)
...+|. |.+|..++. |..++...+...... ......|.+|....+|. |..|..++
T Consensus 320 ~D~~g~-lWigt~~~G--------------l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~ 383 (781)
T 3v9f_A 320 QDSFNN-IWIGTWGGG--------------INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGG 383 (781)
T ss_dssp ECSSCC-EEEEEBSSC--------------EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSS
T ss_pred EeCCCC-EEEEecCCe--------------EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCC
Confidence 988876 555664554 555555433322211 01235689999888776 45566566
Q ss_pred cEEEEECCCC
Q psy10063 596 FLISNTLSNG 605 (894)
Q Consensus 596 ~I~vwdl~~~ 605 (894)
-|.+|+...+
T Consensus 384 Gl~~~~~~~~ 393 (781)
T 3v9f_A 384 GINVFENGKR 393 (781)
T ss_dssp CEEEEETTEE
T ss_pred cEEEEECCCC
Confidence 6888887654
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.63 E-value=1.8e-05 Score=92.55 Aligned_cols=165 Identities=15% Similarity=0.096 Sum_probs=99.7
Q ss_pred CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE-EEEEecCCCEEEEEEC--
Q psy10063 420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN-DMQFSKDATMFITASK-- 496 (894)
Q Consensus 420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~-~l~~spdg~~L~sgs~-- 496 (894)
++.+|+.++.|+.|..+|.++|+.+.++..... .. +. .+. ...+. ++ .|+.++.
T Consensus 114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~-~~--------~~------------~~~~~P~v~-~g-~v~vg~~~~ 170 (571)
T 2ad6_A 114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCDP-KV--------GS------------TLTQAPFVA-KD-TVLMGCSGA 170 (571)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCCG-GG--------TC------------BCCSCCEEE-TT-EEEEECBCG
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCC-Cc--------cc------------eeccCCEEE-CC-EEEEEecCC
Confidence 366888888899999999999998877653221 00 00 010 00111 33 4455443
Q ss_pred ----CCCEEEEEcCCCcEEEEEeCCCCe---------------------------------------eEEEEcCCCCEEE
Q psy10063 497 ----DHTAKLFTTHDRQLLKTYTTERPV---------------------------------------NSAALSPILPHVV 533 (894)
Q Consensus 497 ----Dg~V~iwdl~~~~~~~~~~~~~~v---------------------------------------~~l~~spdg~~l~ 533 (894)
++.|+.+|.++|+++..+...... ..+++.++...|+
T Consensus 171 ~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy 250 (571)
T 2ad6_A 171 ELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFY 250 (571)
T ss_dssp GGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEE
T ss_pred ccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEE
Confidence 789999999999999887653221 2356777777888
Q ss_pred EEECCCCeEEEeccCccc--e--eeEEEEeccccceEEEccC--CCC----CeEE---EEEecCCC---EEEEEeCCCcE
Q psy10063 534 LGGGQEAREVTTTSTKVG--K--FDARFYHLIFEEEFARIKG--HFG----PINS---LAFHPDGK---SYASGGEDGFL 597 (894)
Q Consensus 534 ~~~~~~~~~v~~~~~~~~--~--~~v~vwd~~~~~~~~~l~~--h~~----~V~~---l~~spdg~---~l~sgs~Dg~I 597 (894)
++...... |......+ . -.|..+|.++|+.+-.++. |.. .+.. +....+|+ .|+.++.+|.|
T Consensus 251 ~~~g~~~~--~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l 328 (571)
T 2ad6_A 251 YGSGNPAP--WNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGIL 328 (571)
T ss_dssp EECCCCSC--SCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEE
T ss_pred EECCCCcc--ccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEE
Confidence 77654321 11110000 0 1277888888887766542 211 1111 22234774 57788899999
Q ss_pred EEEECCCCcccc
Q psy10063 598 ISNTLSNGLDIS 609 (894)
Q Consensus 598 ~vwdl~~~~~~~ 609 (894)
+++|.++++.+.
T Consensus 329 ~~lD~~tG~~~w 340 (571)
T 2ad6_A 329 YTLNRENGNLIV 340 (571)
T ss_dssp EEEETTTCCEEE
T ss_pred EEEECCCCCEEe
Confidence 999999887653
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.58 E-value=2.1e-06 Score=88.24 Aligned_cols=154 Identities=13% Similarity=0.125 Sum_probs=107.4
Q ss_pred CCEEEEEEccCCCEEEEecCCC--cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063 410 AKITSLLWGNLDQYIITGHAKG--DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD 487 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg--~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd 487 (894)
.....|.|+ ++.++++.+.+| .|+++|+++|+.++.+..... +....+.++
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~--------------------------~FgeGit~~ 95 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR--------------------------YFGEGISDW 95 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT--------------------------CCEEEEEEE
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc--------------------------cceeEEEEe
Confidence 446999999 777677777766 899999999999888865432 222112223
Q ss_pred CCEEEEE-ECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceE
Q psy10063 488 ATMFITA-SKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566 (894)
Q Consensus 488 g~~L~sg-s~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~ 566 (894)
+..|+.. -.++.+.+||.++++++..+.....- ..+++|+++|+++.+.+. |.++|..+.+.+
T Consensus 96 g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG--~glt~dg~~L~~SdGs~~--------------i~~iDp~T~~v~ 159 (262)
T 3nol_A 96 KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG--WGLTHNDQYLIMSDGTPV--------------LRFLDPESLTPV 159 (262)
T ss_dssp TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC--CCEEECSSCEEECCSSSE--------------EEEECTTTCSEE
T ss_pred CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc--eEEecCCCEEEEECCCCe--------------EEEEcCCCCeEE
Confidence 4444444 35789999999999999999875432 344467888887765543 788898888888
Q ss_pred EEccCC--C---CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc
Q psy10063 567 ARIKGH--F---GPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD 607 (894)
Q Consensus 567 ~~l~~h--~---~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~ 607 (894)
..+.-. . ..+..|.|. +|+.++..-.+..|.+.|.++++.
T Consensus 160 ~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 160 RTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp EEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBE
T ss_pred EEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcE
Confidence 776432 1 334567776 776555555678899999988873
No 254
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.58 E-value=3.8e-05 Score=80.39 Aligned_cols=180 Identities=8% Similarity=-0.004 Sum_probs=116.0
Q ss_pred CCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC-Cc-----------
Q psy10063 410 AKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQ-AV----------- 476 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~-~i----------- 476 (894)
..+.+++|+++++.|+.+ ...+.|.++++..+.....+..... ....|++++++..|.++.... .+
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG-SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC-CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE
Confidence 457899999977666554 4567899999886654444433323 788999999876666554321 11
Q ss_pred -------cceEEEEEecCCCEEEEEEC---CCCEEEEEcCCCcEEEEEe-C-CCCeeEEEEcCCCCEEEEEECCCCeEEE
Q psy10063 477 -------EPINDMQFSKDATMFITASK---DHTAKLFTTHDRQLLKTYT-T-ERPVNSAALSPILPHVVLGGGQEAREVT 544 (894)
Q Consensus 477 -------~~V~~l~~spdg~~L~sgs~---Dg~V~iwdl~~~~~~~~~~-~-~~~v~~l~~spdg~~l~~~~~~~~~~v~ 544 (894)
.....|+++|++.+|+.+.. .+.|.++++.. +....+. . ......++|++++.+|+++......
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~--- 190 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR--- 190 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE---
T ss_pred EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE---
Confidence 35678899997666666554 36788888753 3333332 2 3567899999999988888766542
Q ss_pred eccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCcc
Q psy10063 545 TTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGLD 607 (894)
Q Consensus 545 ~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~~ 607 (894)
|.++|+........+.+ ......|++. +.+|+.+. ..+.|.+++.+.++.
T Consensus 191 ----------I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 191 ----------AECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp ----------EEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEE
T ss_pred ----------EEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCc
Confidence 66777664433333332 2334567664 44555554 567899999987653
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.57 E-value=8.6e-05 Score=86.98 Aligned_cols=78 Identities=12% Similarity=0.066 Sum_probs=53.8
Q ss_pred CCCcEEEEEccCCceeeccccCCC--ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCee-EEEEeeC
Q psy10063 780 ADKVSERYRDRKNKATAGFLLSCP--DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN-SLAFHPD 856 (894)
Q Consensus 780 ~Dg~I~iwd~~~~~~~~~~~~~~~--~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~-~l~fSpd 856 (894)
.+|.|+.||+.+++.+.++..... ...+...+..++++..++ .|+.||.++|+++.+++...+.+. -+.|..|
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg----~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~ 539 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDG----YFKAFDAKSGKELWKFQTGSGIVSPPITWEQD 539 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTS----EEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCC----cEEEEECCCCCEEEEecCCCCcccCceEEEEC
Confidence 467889999988888766554332 223444567777776665 699999999999988875443322 3677889
Q ss_pred CcEEE
Q psy10063 857 GKSYA 861 (894)
Q Consensus 857 g~~La 861 (894)
|+.++
T Consensus 540 G~qYv 544 (582)
T 1flg_A 540 GEQYL 544 (582)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 97443
No 256
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.55 E-value=7.2e-06 Score=99.60 Aligned_cols=145 Identities=8% Similarity=0.006 Sum_probs=85.5
Q ss_pred CEEEEEEc-cCCCEEEEecC-C----CcEEEEecCCC-eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063 411 KITSLLWG-NLDQYIITGHA-K----GDICTWDLRMG-RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ 483 (894)
Q Consensus 411 ~V~~l~~s-pdg~~L~sgs~-D----g~I~iWd~~tg-~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~ 483 (894)
.+.+++|| |||++||.+.. + ..|+|+|+.+| +.+. . .+.. ....++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~---~----~~~~--------------------~~~~~~ 227 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA---D----KVSG--------------------TNGEIV 227 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC---C----CEEE--------------------ECSCCE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC---c----cccC--------------------ceeeEE
Confidence 67889999 99998886532 2 35999999988 6321 0 0100 112345
Q ss_pred EecCCCEEEEEECC-----CCEEEEEcCCCcE--EEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063 484 FSKDATMFITASKD-----HTAKLFTTHDRQL--LKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD 554 (894)
Q Consensus 484 ~spdg~~L~sgs~D-----g~V~iwdl~~~~~--~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~ 554 (894)
|+|||+.|+....| ..|++|++.+++. ...+.. ......+.|+|||++|++...... ..+
T Consensus 228 WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-----------~~~ 296 (751)
T 2xe4_A 228 WGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPE-----------TAE 296 (751)
T ss_dssp ECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSS-----------CEE
T ss_pred EecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCC-----------Cce
Confidence 55665555554443 2577888877642 233332 344678899999999988765432 224
Q ss_pred EEEEeccccc-eE--EEc-cCCCCCeEEEEEecCCCEEEEEeC
Q psy10063 555 ARFYHLIFEE-EF--ARI-KGHFGPINSLAFHPDGKSYASGGE 593 (894)
Q Consensus 555 v~vwd~~~~~-~~--~~l-~~h~~~V~~l~~spdg~~l~sgs~ 593 (894)
|+++|+..+. .. ..+ .+.....+++.|+.++.+++....
T Consensus 297 l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~ 339 (751)
T 2xe4_A 297 VHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNE 339 (751)
T ss_dssp EEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECT
T ss_pred EEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCC
Confidence 7888887652 22 333 334455566666543333344333
No 257
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.55 E-value=1.2e-05 Score=86.88 Aligned_cols=112 Identities=11% Similarity=-0.040 Sum_probs=67.9
Q ss_pred EEEeeCCCCCEEEEe-cCCCcEEEEEccCCc-----eeeccccCCCceEeecCCCeEEEEecCCC------CceeEEEee
Q psy10063 764 FKMPEPPKREKLALA-LADKVSERYRDRKNK-----ATAGFLLSCPDFLFDFDTTREVTTTSTKV------GKFDARFYH 831 (894)
Q Consensus 764 ~~la~spdg~~Latg-s~Dg~I~iwd~~~~~-----~~~~~~~~~~~~~fS~dg~~l~~as~d~~------g~~~I~vwd 831 (894)
..|++++++++|+++ ...+.|++|++.... .+... .+...+++.++|...++...... ....|.++|
T Consensus 188 ~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~-~gP~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d 266 (322)
T 2fp8_A 188 GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI-PNPGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFD 266 (322)
T ss_dssp CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC-SSEEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEEC
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC-CCCCCeEECCCCCEEEEecCcccccccCCCccEEEEEC
Confidence 457888998866554 556788888876421 11111 12445778888875554433100 011478888
Q ss_pred cCCcceeeeccCC----CCCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063 832 LIFEEEFARIKGH----FGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY 878 (894)
Q Consensus 832 ~~tg~~l~~l~gH----~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~ 878 (894)
.+ |+.+..+... ...+.++++ .+++++++....+.|.+++++...
T Consensus 267 ~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 267 EF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp TT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC----
T ss_pred CC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccccc
Confidence 75 7777666543 345777777 577777777778889999987554
No 258
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.55 E-value=4.4e-06 Score=86.92 Aligned_cols=113 Identities=7% Similarity=0.041 Sum_probs=79.1
Q ss_pred eEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063 479 INDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR 556 (894)
Q Consensus 479 V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~ 556 (894)
...|+|++|+.++++.+. ++.|+++|+.+++.+..+..........+..+|++|+.+...... +.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~-------------v~ 89 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNI-------------GF 89 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSE-------------EE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCE-------------EE
Confidence 567888887654444443 578999999999999998765433333344447788888766553 88
Q ss_pred EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063 557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
++|..+++.+..+..-... .+.+++||++|+.+..++.|.++|.++.+
T Consensus 90 viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 90 IYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFK 137 (266)
T ss_dssp EEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCC
T ss_pred EEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCc
Confidence 9999999998887532122 23355688877777778889999886643
No 259
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.49 E-value=0.0018 Score=76.22 Aligned_cols=364 Identities=11% Similarity=0.021 Sum_probs=170.9
Q ss_pred ceEEEEEecCCCEEEEE-ECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063 478 PINDMQFSKDATMFITA-SKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA 555 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sg-s~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v 555 (894)
....|++...+..|+.+ ...+.|.+.++........+. .-.....|++.|.+.+|+.......-. |
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~------------I 152 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPK------------I 152 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCE------------E
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCE------------E
Confidence 67889999866655554 456889999987554433332 335688999999888887776432211 4
Q ss_pred EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCcccc----CCCceeeeEECcCCcEEEe-c
Q psy10063 556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGLVYPS-Q 629 (894)
Q Consensus 556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~~l~~-~ 629 (894)
...++........+.........|+++++++.|+.+. ..+.|..++++...... .......+++..+..++.. .
T Consensus 153 ~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~ 232 (619)
T 3s94_A 153 ERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWS 232 (619)
T ss_dssp EEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTT
T ss_pred EEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCC
Confidence 4444442222222223445678999999777666654 45678888887644221 1122234444444222221 1
Q ss_pred CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCC-eEEeeccCCcceeEeccCcceeEEee
Q psy10063 630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGT-RLHVNPFDEQQSVELTKDEQIEMARN 708 (894)
Q Consensus 630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~s~~~~~~~~~~ 708 (894)
.+.+..+...... . ...+.........|.++....+......+.....+. .+++...... .
T Consensus 233 ~~~V~~~d~~tg~--~-~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~---------------~ 294 (619)
T 3s94_A 233 THSILACNKYTGE--G-LREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKP---------------F 294 (619)
T ss_dssp TCSEEEEESSSCC--C-CEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTT---------------S
T ss_pred CCEEEEEECCCCc--c-cEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCC---------------C
Confidence 2233333322111 0 111111111223344433211110000000000000 0111000000 0
Q ss_pred eEEEcCCCCEEEecccCcccccc-CCcceeeccccC-cccccCCCCcc--ee-cCCCCceEEEeeCCCCCEEE-EecCCC
Q psy10063 709 RMSINHSGTRLHVNPFDEQQSVD-ASPLMTWGHIEG-TPFKLDGSDTP--IL-AGPVDIGFKMPEPPKREKLA-LALADK 782 (894)
Q Consensus 709 ~~~~s~~g~~l~v~~~~~~~~~~-~~~l~~~~~~~g-~~~~~dg~~~~--~~-~~h~~~v~~la~spdg~~La-tgs~Dg 782 (894)
..+..+.|..+.. +...+.. ...+.++..... ..+.++..... .+ ......+..|+|.+.+..|. +-...+
T Consensus 295 ~~C~C~~g~~l~~---d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~ 371 (619)
T 3s94_A 295 YQCACPTGVKLLE---NGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVR 371 (619)
T ss_dssp EEEECCTTCCBCT---TSSCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTT
T ss_pred ceEeCCchheecc---cCcccCCCCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCC
Confidence 0111122221110 1111111 111111111110 11112222111 11 12234577899988655555 445577
Q ss_pred cEEEEEccCCce--eec-cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec-cCCCCCeeEEEEeeC-C
Q psy10063 783 VSERYRDRKNKA--TAG-FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI-KGHFGPINSLAFHPD-G 857 (894)
Q Consensus 783 ~I~iwd~~~~~~--~~~-~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l-~gH~~~V~~l~fSpd-g 857 (894)
.|+.++...... +.. -......+++.+.+..|+.+..... .|.+.++.... ...+ ........+|++.|. |
T Consensus 372 ~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~---~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G 447 (619)
T 3s94_A 372 AIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTD---RIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVG 447 (619)
T ss_dssp EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTT---EEEEEETTSCS-CEEEECTTCCSEEEEEEETTTT
T ss_pred eEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCC---cEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCC
Confidence 888888765322 221 1234557888887887777754432 68999987543 3333 334567889999997 5
Q ss_pred cEEEEe-cCCCcEEEEecCccc
Q psy10063 858 KSYASG-GEDGFVRLHTFDQAY 878 (894)
Q Consensus 858 ~~LaS~-s~Dg~V~vWdl~~~~ 878 (894)
.++++- +..+.|...++++..
T Consensus 448 ~ly~tD~g~~~~I~r~~~dG~~ 469 (619)
T 3s94_A 448 YMYWTDWGEIPKIERAALDGSD 469 (619)
T ss_dssp EEEEEECSSSCEEEEEETTSCS
T ss_pred cEEEecCCCCCEEEEEccCCCc
Confidence 444443 334566666666543
No 260
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.45 E-value=1.3e-05 Score=82.47 Aligned_cols=155 Identities=11% Similarity=0.017 Sum_probs=107.8
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC
Q psy10063 409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA 488 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg 488 (894)
......|.|+ ++.++++.+.+|.|+++|+++|+.++.+ .... .. -..+++.. +
T Consensus 54 ~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~--~F----------------------geGit~~g-~ 106 (268)
T 3nok_A 54 NAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN--IF----------------------AEGLASDG-E 106 (268)
T ss_dssp TCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT--CC----------------------EEEEEECS-S
T ss_pred ccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC--cc----------------------eeEEEEeC-C
Confidence 3556899997 4567777888899999999999988777 3221 11 11233322 2
Q ss_pred CEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063 489 TMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR 568 (894)
Q Consensus 489 ~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~ 568 (894)
++.+..-.++.+.+||.++++++..+.....-..++ +|+++|+++.+.+. |.++|.++.+.+..
T Consensus 107 ~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~--------------l~~iDp~T~~v~~~ 170 (268)
T 3nok_A 107 RLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTM--------------LTFHEPDGFALVGA 170 (268)
T ss_dssp CEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSE--------------EEEECTTTCCEEEE
T ss_pred EEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCE--------------EEEEcCCCCeEEEE
Confidence 333444467899999999999999998754334444 57888888876554 88899888888877
Q ss_pred ccCCC-----CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc
Q psy10063 569 IKGHF-----GPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD 607 (894)
Q Consensus 569 l~~h~-----~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~ 607 (894)
+.-.. ..+..|.|. +|+.++..-.+..|.+.|.++++.
T Consensus 171 I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 171 VQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBE
T ss_pred EEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcE
Confidence 64321 245677887 776555554678899999988863
No 261
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.44 E-value=6.7e-05 Score=76.43 Aligned_cols=176 Identities=10% Similarity=0.034 Sum_probs=116.8
Q ss_pred CCCCEEEEEEccCCCEEEEecCC--CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063 408 QSAKITSLLWGNLDQYIITGHAK--GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS 485 (894)
Q Consensus 408 H~~~V~~l~~spdg~~L~sgs~D--g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s 485 (894)
....+..|.|+. +.++.+.+.+ ..|+++|+++|+.++.+..... +. -..+++.
T Consensus 19 ~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~--~f----------------------geGi~~~ 73 (243)
T 3mbr_X 19 TTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP--YF----------------------GAGIVAW 73 (243)
T ss_dssp TTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT--CC----------------------EEEEEEE
T ss_pred CccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC--cc----------------------eeEEEEe
Confidence 346688999986 5566666665 4899999999999988865432 11 1122222
Q ss_pred cCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce
Q psy10063 486 KDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE 565 (894)
Q Consensus 486 pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~ 565 (894)
++++.+..-.++.+.+||.++++++..+.....-..|+ +++++|+++.+.+. |.++|.++.+.
T Consensus 74 -~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~--------------l~~iDp~t~~~ 136 (243)
T 3mbr_X 74 -RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAV--------------IRKLDPDTLQQ 136 (243)
T ss_dssp -TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSE--------------EEEECTTTCCE
T ss_pred -CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCe--------------EEEEeCCCCeE
Confidence 22333344467899999999999999998754334444 57788888766554 88889888888
Q ss_pred EEEccCCC-----CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc-----------------CCCceeeeEECcCC
Q psy10063 566 FARIKGHF-----GPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS-----------------EGSFTSSSTQQPDG 623 (894)
Q Consensus 566 ~~~l~~h~-----~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~-----------------~~~~v~~~~~spdg 623 (894)
++.+.-.. ..+..|.|. +|+.++..-.+..|.+.|.++++.+. .......+++.|++
T Consensus 137 ~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~ 215 (243)
T 3mbr_X 137 VGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH 215 (243)
T ss_dssp EEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT
T ss_pred EEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC
Confidence 77764321 345567765 66655555467789999988876321 12244567777766
Q ss_pred cEE
Q psy10063 624 LVY 626 (894)
Q Consensus 624 ~~l 626 (894)
..+
T Consensus 216 ~~l 218 (243)
T 3mbr_X 216 DRL 218 (243)
T ss_dssp TEE
T ss_pred CEE
Confidence 555
No 262
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.44 E-value=3.6e-05 Score=83.09 Aligned_cols=181 Identities=10% Similarity=0.055 Sum_probs=110.5
Q ss_pred EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCC--------------------CCCCeeEEEEcC-C
Q psy10063 405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGH--------------------AKEPINDMQFSK-D 463 (894)
Q Consensus 405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h--------------------~~~~V~~v~~sp-d 463 (894)
+.+.-....+++|+++|++|+++..++.|..||...++.. .+... .. .+..|++.+ +
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~-~p~gi~~~~~~ 91 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCG-RTYDISYNLQN 91 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHC-CEEEEEEETTT
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCC-CCceEEEcCCC
Confidence 4444455677888888887888888888988988765432 22110 12 567888887 5
Q ss_pred CCEEEEEeCCCCc----------------------cceEEEEEec-CCCEEEEEEC-----------------CCCEEEE
Q psy10063 464 ATMFITASHSQAV----------------------EPINDMQFSK-DATMFITASK-----------------DHTAKLF 503 (894)
Q Consensus 464 g~~la~~~~d~~i----------------------~~V~~l~~sp-dg~~L~sgs~-----------------Dg~V~iw 503 (894)
|++++ +.....+ .....|++.+ +|.+.++... ++.|..|
T Consensus 92 g~l~v-~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 92 NQLYI-VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp TEEEE-EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred CcEEE-EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 54433 3221111 1356788888 8876665432 3668888
Q ss_pred EcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECC-CCeEEEeccCccceeeEEEEeccccc--eEEEccCCCCCeEEEE
Q psy10063 504 TTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQ-EAREVTTTSTKVGKFDARFYHLIFEE--EFARIKGHFGPINSLA 580 (894)
Q Consensus 504 dl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~-~~~~v~~~~~~~~~~~v~vwd~~~~~--~~~~l~~h~~~V~~l~ 580 (894)
|...++.......-.....|+|+++|++|+++... +. |++|++.... ....+....+ ...|+
T Consensus 171 d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~--------------I~~~~~~~~~~~~~~~~~~~~g-P~gi~ 235 (322)
T 2fp8_A 171 DPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQ--------------IVKYWLEGPKKGTAEVLVKIPN-PGNIK 235 (322)
T ss_dssp ETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTE--------------EEEEESSSTTTTCEEEEEECSS-EEEEE
T ss_pred eCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCe--------------EEEEECCCCcCCccceEEeCCC-CCCeE
Confidence 88777655443333456789999999988877554 33 5556554311 1111111123 67899
Q ss_pred EecCCCEEEEEeC----------CCcEEEEECC
Q psy10063 581 FHPDGKSYASGGE----------DGFLISNTLS 603 (894)
Q Consensus 581 ~spdg~~l~sgs~----------Dg~I~vwdl~ 603 (894)
++++|.++++... .+.|.+++.+
T Consensus 236 ~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 236 RNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp ECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred ECCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 9999987666544 3456666653
No 263
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.42 E-value=1.3e-05 Score=82.34 Aligned_cols=112 Identities=4% Similarity=-0.069 Sum_probs=83.3
Q ss_pred ceEEEEEecCCCEEEEEECCC--CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063 478 PINDMQFSKDATMFITASKDH--TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA 555 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg--~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v 555 (894)
....|.|+ ++.++++.+.+| .|+++|+++++.+..+..........+.+++.+|+........ +
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~-------------v 109 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGL-------------G 109 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSE-------------E
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCE-------------E
Confidence 35778888 676677777766 8999999999999999877666665555567788888765543 8
Q ss_pred EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063 556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
.+||.++++.+..+.... .-+.|+ +|++.|+....++.|.++|.++.+
T Consensus 110 ~v~D~~t~~~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~ 157 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLT 157 (262)
T ss_dssp EEEETTTCCEEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCS
T ss_pred EEEECccCcEEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCe
Confidence 899999999999886432 223444 577777776667789999887654
No 264
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.38 E-value=0.00026 Score=75.71 Aligned_cols=59 Identities=19% Similarity=0.135 Sum_probs=42.6
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG 537 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~ 537 (894)
....++|+++|+++++....+.|+.||... +....+.....+.+|++.++|+++++...
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEEC
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEecc
Confidence 466788888888666665778888888764 45555555667899999999996555443
No 265
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.37 E-value=9.5e-06 Score=96.99 Aligned_cols=120 Identities=9% Similarity=0.069 Sum_probs=71.9
Q ss_pred EEEEcc-CCCEEEEecCCC-----------cEEEEecCCCeEE--EEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063 414 SLLWGN-LDQYIITGHAKG-----------DICTWDLRMGREL--ESISGHAKEPINDMQFSKDATMFITASHSQAVEPI 479 (894)
Q Consensus 414 ~l~~sp-dg~~L~sgs~Dg-----------~I~iWd~~tg~~~--~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V 479 (894)
++++.+ +|++++.|+.+. .+.+||+.+++.. ..+..... ...
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~------------------------~~~ 245 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD------------------------MFC 245 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC------------------------CSS
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC------------------------Ccc
Confidence 556677 888888887543 5788888876532 22211111 022
Q ss_pred EEEEEecCCCEEEEEEC-CCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEEC-CCCeEEEeccCccceeeE
Q psy10063 480 NDMQFSKDATMFITASK-DHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGG-QEAREVTTTSTKVGKFDA 555 (894)
Q Consensus 480 ~~l~~spdg~~L~sgs~-Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~-~~~~~v~~~~~~~~~~~v 555 (894)
.++++..+|++++.|+. +..+++||..+.+....-.. ...-.++++.++|+.+++|+. ++.. ...++
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~---------~~~~~ 316 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGV---------FEKNG 316 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSS---------CCCCE
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCc---------ccccc
Confidence 34556677777777763 45799999987765443222 222345677789998888883 3321 11237
Q ss_pred EEEeccccceE
Q psy10063 556 RFYHLIFEEEF 566 (894)
Q Consensus 556 ~vwd~~~~~~~ 566 (894)
.+||....+..
T Consensus 317 e~yd~~t~~W~ 327 (656)
T 1k3i_A 317 EVYSPSSKTWT 327 (656)
T ss_dssp EEEETTTTEEE
T ss_pred eEeCCCCCcce
Confidence 78887766543
No 266
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.32 E-value=0.00017 Score=74.44 Aligned_cols=183 Identities=13% Similarity=0.198 Sum_probs=119.8
Q ss_pred EEecCCCCEEEEEEccCCCEEE-EecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC---------
Q psy10063 404 QVTDQSAKITSLLWGNLDQYII-TGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHS--------- 473 (894)
Q Consensus 404 ~l~~H~~~V~~l~~spdg~~L~-sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d--------- 473 (894)
.+.|-.+.+..|+|+|+++.|+ +...++.|...|+. |+.++.+..........|++.+++.++++.-.+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4556667899999999877555 46678889999988 888888753322267888888887765542221
Q ss_pred --CCc----------------cceEEEEEecCCCEEEEEECCCCEEEEEcC---CCcEEEEEeC--------CCCeeEEE
Q psy10063 474 --QAV----------------EPINDMQFSKDATMFITASKDHTAKLFTTH---DRQLLKTYTT--------ERPVNSAA 524 (894)
Q Consensus 474 --~~i----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~---~~~~~~~~~~--------~~~v~~l~ 524 (894)
+.+ .....|+|+|+++.|+++.+.....||.+. ....+..+.. -..+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 211 234789999998878777766666666654 1222233321 23678999
Q ss_pred EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC---------CCCeEEEEEecCCCEEEEEeCCC
Q psy10063 525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH---------FGPINSLAFHPDGKSYASGGEDG 595 (894)
Q Consensus 525 ~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h---------~~~V~~l~~spdg~~l~sgs~Dg 595 (894)
+.|...+|++.+..... |.++|.. |+.+..+.-. ...-..|+|.++|.++++ ++..
T Consensus 180 ~dp~tg~lliLS~~s~~-------------L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n 244 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRA-------------LQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPN 244 (255)
T ss_dssp EETTTTEEEEEETTTTE-------------EEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTT
T ss_pred EcCCCCeEEEEECCCCe-------------EEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCc
Confidence 99998888888877754 5555644 3333332211 125689999999984444 6766
Q ss_pred cEEEEEC
Q psy10063 596 FLISNTL 602 (894)
Q Consensus 596 ~I~vwdl 602 (894)
.+++|.-
T Consensus 245 ~~y~f~~ 251 (255)
T 3qqz_A 245 RFYRFTP 251 (255)
T ss_dssp EEEEEEC
T ss_pred eEEEEEe
Confidence 6666643
No 267
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.27 E-value=4.6e-05 Score=81.92 Aligned_cols=104 Identities=15% Similarity=0.022 Sum_probs=65.3
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR 556 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~ 556 (894)
.+.++.+.++|.+++ ++ +.|..|| .+++.+..+.. ...+.++++.++|. |++++.++. |.
T Consensus 178 ~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~g--------------l~ 238 (330)
T 3hxj_A 178 ITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGH--------------LY 238 (330)
T ss_dssp CCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTE--------------EE
T ss_pred ceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCe--------------EE
Confidence 344555656666444 44 7899999 77777766654 35688888888875 555665555 44
Q ss_pred EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063 557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTL 602 (894)
Q Consensus 557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl 602 (894)
.+|. .++.+..+......+.++.+..++ .|+.++.+|.|..+|.
T Consensus 239 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 239 AINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP 282 (330)
T ss_dssp EECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT
T ss_pred EECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC
Confidence 4442 344444444333444456665555 4667788888999986
No 268
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.22 E-value=3.5e-05 Score=79.20 Aligned_cols=111 Identities=8% Similarity=-0.074 Sum_probs=81.6
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF 557 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v 557 (894)
....|.|+ ++.++++.+.+|.|+++|+++++.++.+ .........+.+++.+|+........ +.+
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~-------------v~V 120 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGL-------------LFT 120 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCE-------------EEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCE-------------EEE
Confidence 35677776 4566777788889999999999999888 66555554444566777777655543 899
Q ss_pred EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063 558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
||.++++.+..+... ..-+.|+ +|++.|+.+..++.|+++|.++.+
T Consensus 121 ~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 121 WSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp EETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCC
T ss_pred EECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCe
Confidence 999999999988643 2224554 467888877778899999987654
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.21 E-value=0.00081 Score=74.50 Aligned_cols=107 Identities=7% Similarity=-0.098 Sum_probs=64.4
Q ss_pred EEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063 481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL 560 (894)
Q Consensus 481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~ 560 (894)
|.+..+ ..+|+.+ ....|+.+++........+.....+..++|++.+..|+........ |+.+++
T Consensus 81 C~~~~~-~~~l~~~-~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~-------------I~r~~~ 145 (386)
T 3v65_B 81 CKALGP-EPVLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDR-------------ILRANL 145 (386)
T ss_dssp EEECSS-CCEEEEE-CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTE-------------EEEEET
T ss_pred ECCccc-cceeEee-cCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCc-------------EEEEec
Confidence 334344 2344433 4467888898877766666666778999999988888887765542 667777
Q ss_pred cccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEEC
Q psy10063 561 IFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTL 602 (894)
Q Consensus 561 ~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl 602 (894)
..+.....+.........|++++.+..|+... ..+.|.++++
T Consensus 146 ~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~ 188 (386)
T 3v65_B 146 NGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANL 188 (386)
T ss_dssp TSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBT
T ss_pred CCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeC
Confidence 65443333332333456677776555444333 3444555444
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.19 E-value=3.6e-05 Score=93.42 Aligned_cols=111 Identities=14% Similarity=0.091 Sum_probs=63.8
Q ss_pred eEEEeeCCCCCEEEEecC---CCcEEEEEccCCc-ee--eccccCCCceEeecC---CCeEEEEecCC-CCceeEEEeec
Q psy10063 763 GFKMPEPPKREKLALALA---DKVSERYRDRKNK-AT--AGFLLSCPDFLFDFD---TTREVTTTSTK-VGKFDARFYHL 832 (894)
Q Consensus 763 v~~la~spdg~~Latgs~---Dg~I~iwd~~~~~-~~--~~~~~~~~~~~fS~d---g~~l~~as~d~-~g~~~I~vwd~ 832 (894)
...+.|+|||++|+..+. ...|+++|+.... .. ..+........|+++ |..++..+... .+.+.|+++++
T Consensus 273 ~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~ 352 (751)
T 2xe4_A 273 SAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPR 352 (751)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEET
T ss_pred EEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcC
Confidence 346778888888876553 3357788877642 12 223222334456565 88877776654 45667889998
Q ss_pred CCcceeee-ccCCCC--CeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063 833 IFEEEFAR-IKGHFG--PINSLAFHPDGKSYASGGEDGFVRLHTF 874 (894)
Q Consensus 833 ~tg~~l~~-l~gH~~--~V~~l~fSpdg~~LaS~s~Dg~V~vWdl 874 (894)
..+..... +..|.. .+..+.+. .+.++++...||..+||-+
T Consensus 353 ~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 353 GQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp TSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEE
T ss_pred CCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEE
Confidence 75322233 333443 34445544 2345566777786555543
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.17 E-value=0.0002 Score=80.54 Aligned_cols=128 Identities=6% Similarity=-0.013 Sum_probs=90.5
Q ss_pred CEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC-Cc------------
Q psy10063 411 KITSLLWGN-LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQ-AV------------ 476 (894)
Q Consensus 411 ~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~-~i------------ 476 (894)
....|+|+| ++..|+.+...+.|+++|+..++....+. ... ....|+|+++|++|+++...+ .+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~-~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLS-KVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCS-CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCC-CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc
Confidence 457899998 46667776655789999998777554444 333 789999999999766665421 11
Q ss_pred ----------cceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCC
Q psy10063 477 ----------EPINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEA 540 (894)
Q Consensus 477 ----------~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~ 540 (894)
....+++++| +|.++++-...+.|+.|+...+.....+.. ......|+|+|+|++|+++.....
T Consensus 216 ~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 216 FKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp SCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred eeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence 2345678899 677666666778899999987765343333 245789999999998887765543
No 272
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.16 E-value=0.00017 Score=73.34 Aligned_cols=112 Identities=8% Similarity=0.022 Sum_probs=82.5
Q ss_pred ceEEEEEecCCCEEEEEECCC--CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063 478 PINDMQFSKDATMFITASKDH--TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA 555 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg--~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v 555 (894)
....|.|+. +.++.+.+.+| .|+++|+++++.++.+..........+..++.+|+........ +
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~-------------v 87 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHE-------------G 87 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSE-------------E
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCE-------------E
Confidence 466788875 55666666654 8999999999999999877666655555567788877755543 8
Q ss_pred EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063 556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
.+||..+.+.+..+.... .-+.|+ +|++.|+.+..++.|.++|.++.+
T Consensus 88 ~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~ 135 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQ 135 (243)
T ss_dssp EEEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCC
T ss_pred EEEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCe
Confidence 899999999999886432 224554 467777777778889999987654
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.15 E-value=0.0032 Score=68.54 Aligned_cols=109 Identities=7% Similarity=-0.082 Sum_probs=66.4
Q ss_pred EEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063 480 NDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
.|.+..+++ +|+.+ ....|+..++........+.....+..++|++.+..|+........ |+.++
T Consensus 37 ~C~~~~~~~-~ll~~-~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~-------------I~r~~ 101 (349)
T 3v64_C 37 SCKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDR-------------ILRAN 101 (349)
T ss_dssp CEEESSSCC-EEEEE-CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTE-------------EEEEE
T ss_pred cccccccCc-eeEee-cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCc-------------eEEEe
Confidence 344444433 34433 3456888888766665555556678999999988888887765542 66777
Q ss_pred ccccceEEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECC
Q psy10063 560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLS 603 (894)
Q Consensus 560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~ 603 (894)
+..+.....+.........|++++.+..|+.. ...+.|.+++++
T Consensus 102 ~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d 146 (349)
T 3v64_C 102 LNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD 146 (349)
T ss_dssp TTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC
Confidence 76554333333333455778888755555443 345566666654
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.13 E-value=0.00093 Score=71.31 Aligned_cols=196 Identities=10% Similarity=0.057 Sum_probs=111.6
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC--c-------cce-
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQA--V-------EPI- 479 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~--i-------~~V- 479 (894)
....+++|+++|+++++-..++.|.+||... +....+.. .. .+..|+|.++|+++++...... + +.+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~-~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV-EG-KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC-SS-EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CC-CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 5677888988888766666778888888764 43333332 22 6788888888885554432111 1 111
Q ss_pred -----------EEEEEecCCCEEEEEECCCCEEEEEcCCCcE-EEEEe-------C-C--CCeeEEEEcCCCCEEEEEEC
Q psy10063 480 -----------NDMQFSKDATMFITASKDHTAKLFTTHDRQL-LKTYT-------T-E--RPVNSAALSPILPHVVLGGG 537 (894)
Q Consensus 480 -----------~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~-~~~~~-------~-~--~~v~~l~~spdg~~l~~~~~ 537 (894)
..+++.+++..+++...++.|+++|...++. +.... . . .....| ++++++|+++..
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 1122223333344433578888888775532 11111 0 1 123445 888988888776
Q ss_pred CCCeEEEeccCccceeeEEEEeccc-cce--EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc-c---cC
Q psy10063 538 QEAREVTTTSTKVGKFDARFYHLIF-EEE--FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD-I---SE 610 (894)
Q Consensus 538 ~~~~~v~~~~~~~~~~~v~vwd~~~-~~~--~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~-~---~~ 610 (894)
.... |.+|++.. ++. ...+. .......|+++++|+++++....+.|.+|+.+.... + ..
T Consensus 187 ~~~~-------------I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~~~~~~~~~~ 252 (306)
T 2p4o_A 187 EKML-------------LLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQ 252 (306)
T ss_dssp TTTE-------------EEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGG
T ss_pred CCCE-------------EEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCCCCEEEEeeccc
Confidence 5542 56666543 221 11111 113456789999998777777778899998763221 1 11
Q ss_pred -CCceeeeEEC---cCCc
Q psy10063 611 -GSFTSSSTQQ---PDGL 624 (894)
Q Consensus 611 -~~~v~~~~~s---pdg~ 624 (894)
.....+++|. +++.
T Consensus 253 ~~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 253 GVIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp TCTTEEEEEECCSTTTTT
T ss_pred ccCCceEEEEecccCCCC
Confidence 2455666776 5543
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.12 E-value=0.0015 Score=72.41 Aligned_cols=182 Identities=8% Similarity=-0.094 Sum_probs=113.3
Q ss_pred CCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeC----------CCCc-
Q psy10063 409 SAKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------SQAV- 476 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~----------d~~i- 476 (894)
...+.+|+|.+.++.|+.. ...+.|+.|++..+.....+..... ....|++.+.+..|..... ++..
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~-~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE-SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS-CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC-CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 4568899999866655544 4567899999886654444443333 5667888876555544432 2211
Q ss_pred --------cceEEEEEecCCCEEEEEEC-C-CCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063 477 --------EPINDMQFSKDATMFITASK-D-HTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTT 545 (894)
Q Consensus 477 --------~~V~~l~~spdg~~L~sgs~-D-g~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~ 545 (894)
.....|++.|.+.+|+.... . +.|..+++........+.. -.....|+|++++.+|+++......
T Consensus 194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~---- 269 (386)
T 3v65_B 194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV---- 269 (386)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE----
T ss_pred EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE----
Confidence 35678899987666665543 3 5677778764433333332 3467899999999999888766542
Q ss_pred ccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063 546 TSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 546 ~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~ 605 (894)
|..+++........+.........|++ .++.++++-...+.|..++...+
T Consensus 270 ---------I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 270 ---------IERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp ---------EEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred ---------EEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence 667776543333333333456678888 34445555556677887775444
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.10 E-value=0.00044 Score=77.81 Aligned_cols=177 Identities=7% Similarity=-0.034 Sum_probs=111.3
Q ss_pred CCEEEEEEccC--CCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC------c-----
Q psy10063 410 AKITSLLWGNL--DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQA------V----- 476 (894)
Q Consensus 410 ~~V~~l~~spd--g~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~------i----- 476 (894)
....+|+|+|+ +..|+.+...+.|+++|+..++....+. ... ....|+|+++|+ |+++...+. +
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~-~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIG-QCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCS-CEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCC-CccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence 34678999995 4556666544889999998887655443 333 689999999999 444443210 0
Q ss_pred ------------cceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEE-EEEeC--CCCeeEEEEcCCCCEEEEEECCCC
Q psy10063 477 ------------EPINDMQFSK-DATMFITASKDHTAKLFTTHDRQLL-KTYTT--ERPVNSAALSPILPHVVLGGGQEA 540 (894)
Q Consensus 477 ------------~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~-~~~~~--~~~v~~l~~spdg~~l~~~~~~~~ 540 (894)
.....+++++ +|.++++-..++.|+.+|...++.. ..+.. ......|+|+|+|++|+++.....
T Consensus 216 ~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 216 SGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp GTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred CCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 1235578888 6666656556788999998878763 33332 223457999999998888776543
Q ss_pred eEEEeccCccceeeEEEEecc--ccce--EEEccC---------------CCCCeEEEEE---------ecCCCEEEEEe
Q psy10063 541 REVTTTSTKVGKFDARFYHLI--FEEE--FARIKG---------------HFGPINSLAF---------HPDGKSYASGG 592 (894)
Q Consensus 541 ~~v~~~~~~~~~~~v~vwd~~--~~~~--~~~l~~---------------h~~~V~~l~~---------spdg~~l~sgs 592 (894)
. |+.+++. .+.. ...+.+ .......|++ ..+|.++++-.
T Consensus 296 ~-------------I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~ 362 (433)
T 4hw6_A 296 C-------------IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDR 362 (433)
T ss_dssp E-------------EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEET
T ss_pred E-------------EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEEC
Confidence 2 4443332 1110 011111 1234677888 66676666655
Q ss_pred CCCcEEEEEC
Q psy10063 593 EDGFLISNTL 602 (894)
Q Consensus 593 ~Dg~I~vwdl 602 (894)
..+.|++++.
T Consensus 363 ~n~~I~~~~~ 372 (433)
T 4hw6_A 363 DSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEECT
T ss_pred CCCEEEEECC
Confidence 6677888875
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.10 E-value=0.0039 Score=66.80 Aligned_cols=99 Identities=9% Similarity=-0.078 Sum_probs=61.2
Q ss_pred EEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc----cceE
Q psy10063 491 FITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF----EEEF 566 (894)
Q Consensus 491 L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~----~~~~ 566 (894)
|+.+ ....|+..|+...+....+.....+.+++|++++..|+.+...... |..+++.. ....
T Consensus 4 ll~~-~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~-------------I~~~~~~g~~~~~~~~ 69 (316)
T 1ijq_A 4 LFFT-NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRM-------------ICSTQLDRAHGVSSYD 69 (316)
T ss_dssp EEEE-CBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTE-------------EEEEEC--------CE
T ss_pred EEEE-CCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCc-------------EEEEECCCCCCCcccE
Confidence 4443 3467999999988777766666788999999988888888766442 66666654 1112
Q ss_pred EEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECC
Q psy10063 567 ARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLS 603 (894)
Q Consensus 567 ~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~ 603 (894)
..+.........|++++.++.|+.. ...+.|.+++++
T Consensus 70 ~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 70 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 2222223455778887655544433 445667766654
No 278
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.08 E-value=0.00066 Score=76.35 Aligned_cols=116 Identities=10% Similarity=0.132 Sum_probs=73.1
Q ss_pred cceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCC-eEEEeccCccceee
Q psy10063 477 EPINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEA-REVTTTSTKVGKFD 554 (894)
Q Consensus 477 ~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~-~~v~~~~~~~~~~~ 554 (894)
.....|+|+| ++..|+.+...+.|+++|+..+++...+........|+|+++|++|+++...+. +.. .
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~----------~ 206 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRP----------N 206 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSE----------E
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccc----------e
Confidence 4678899998 455666666558899999988777666665677899999999998888775321 100 0
Q ss_pred EEEEeccccceE--EEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCC
Q psy10063 555 ARFYHLIFEEEF--ARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 555 v~vwd~~~~~~~--~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~ 604 (894)
+.+++. .+... ..+. ......+++++| +|.++++-...+.|++|+.+.
T Consensus 207 v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~ 257 (430)
T 3tc9_A 207 NYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTT 257 (430)
T ss_dssp EEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTT
T ss_pred EEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCC
Confidence 222222 22211 1221 123456788888 566555555667787777653
No 279
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.08 E-value=0.0085 Score=64.49 Aligned_cols=103 Identities=7% Similarity=-0.035 Sum_probs=53.3
Q ss_pred eEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc-------cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCc
Q psy10063 763 GFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL-------LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE 835 (894)
Q Consensus 763 v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~-------~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg 835 (894)
+..+++.+++.+++. +.+|.|++++...++....+. .....+++.+++..++++. ++ .| ++..+.|
T Consensus 207 ~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g----~i-~~S~DgG 279 (327)
T 2xbg_A 207 LHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AG----AL-LCSQDGG 279 (327)
T ss_dssp EEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TT----CE-EEESSTT
T ss_pred cceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CC----eE-EEeCCCC
Confidence 345556666655443 345666655322222222111 1123455666666555443 32 24 4455556
Q ss_pred ceeeecc---CCCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063 836 EEFARIK---GHFGPINSLAFHPDGKSYASGGEDGFVRLHT 873 (894)
Q Consensus 836 ~~l~~l~---gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd 873 (894)
+.-..+. .+...+.+|.|..+++ ++.++.+|.|.-++
T Consensus 280 ~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 280 QTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp SSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred cccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 5444443 2345688999987666 55666788665544
No 280
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.06 E-value=0.022 Score=71.65 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=58.5
Q ss_pred CCEEEEec----------CCCcEEEEEccCCce--eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee
Q psy10063 772 REKLALAL----------ADKVSERYRDRKNKA--TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA 839 (894)
Q Consensus 772 g~~Latgs----------~Dg~I~iwd~~~~~~--~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~ 839 (894)
..+|++|. ..|.|++|++...+. +..........+++.-+.+|+++.+. .|+||++...+.++
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig~-----~l~vy~l~~~~~L~ 918 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINS-----TVRLYEWTTEKELR 918 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEETT-----EEEEEEECTTSCEE
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcCC-----EEEEEECCCCceEE
Confidence 47888775 357899999865443 22222222333344433477777665 49999998765554
Q ss_pred eccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063 840 RIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFD 875 (894)
Q Consensus 840 ~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~ 875 (894)
.-..+...|..+.....|.+|+.|..-..|.++.++
T Consensus 919 ~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~ 954 (1158)
T 3ei3_A 919 TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYK 954 (1158)
T ss_dssp EEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEE
T ss_pred EEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEE
Confidence 111122224444444457788888877778776654
No 281
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.06 E-value=0.0027 Score=69.12 Aligned_cols=182 Identities=8% Similarity=-0.086 Sum_probs=111.2
Q ss_pred CCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEe----------CCCCc-
Q psy10063 409 SAKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITAS----------HSQAV- 476 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~----------~d~~i- 476 (894)
...+.+|+|++.++.|+.. ...+.|+.+++..+.....+..... ....+++.+.+..|.... .++..
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~-~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE-SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 150 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCC-CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce
Confidence 3457899999866666554 4567899999886654444433333 567888887655544333 22221
Q ss_pred --------cceEEEEEecCCCEEEEEE-CC-CCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063 477 --------EPINDMQFSKDATMFITAS-KD-HTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTT 545 (894)
Q Consensus 477 --------~~V~~l~~spdg~~L~sgs-~D-g~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~ 545 (894)
.....|++.|.+.+|+... .. +.|..+++........+.. -.....|+|++++.+|+++......
T Consensus 151 ~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~---- 226 (349)
T 3v64_C 151 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV---- 226 (349)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE----
T ss_pred EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE----
Confidence 3567889998666555554 33 6788887764333222222 3467899999999999888765542
Q ss_pred ccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063 546 TSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 546 ~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~ 605 (894)
|..+++........+.........|++. ++.++++-...+.|..++...+
T Consensus 227 ---------I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 227 ---------IERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp ---------EEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred ---------EEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCC
Confidence 6667765433232333344566788883 4444455455667777774443
No 282
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.02 E-value=0.0053 Score=65.75 Aligned_cols=182 Identities=9% Similarity=-0.054 Sum_probs=108.4
Q ss_pred CCCCEEEEEEccCCCEEEEe-cCCCcEEEEecCC---CeE-EEEecCCCCCCeeEEEEcCCCCEEEEEeC----------
Q psy10063 408 QSAKITSLLWGNLDQYIITG-HAKGDICTWDLRM---GRE-LESISGHAKEPINDMQFSKDATMFITASH---------- 472 (894)
Q Consensus 408 H~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~t---g~~-~~~l~~h~~~~V~~v~~spdg~~la~~~~---------- 472 (894)
....+.+++|+++++.|+.+ ...+.|+.+++.. +.. ...+..... .+..|++.+.+..|.....
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~-~p~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ-APDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS-CCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCC-CcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 34668899999876655554 4568899999875 122 223332223 5678888875554443322
Q ss_pred CCCc---------cceEEEEEecCCCEEEEEECC--CCEEEEEcCCCcEEEEEe-C-CCCeeEEEEcCCCCEEEEEECCC
Q psy10063 473 SQAV---------EPINDMQFSKDATMFITASKD--HTAKLFTTHDRQLLKTYT-T-ERPVNSAALSPILPHVVLGGGQE 539 (894)
Q Consensus 473 d~~i---------~~V~~l~~spdg~~L~sgs~D--g~V~iwdl~~~~~~~~~~-~-~~~v~~l~~spdg~~l~~~~~~~ 539 (894)
++.. .....|++.|.+.+|+.+... +.|..+++. |.....+. . -.....|+|++++.+|+++....
T Consensus 107 ~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~ 185 (316)
T 1ijq_A 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 185 (316)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCC
Confidence 2211 355688899866666655543 678777775 44444443 2 35678999999999998887655
Q ss_pred CeEEEeccCccceeeEEEEeccccceEEEc-c--CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063 540 AREVTTTSTKVGKFDARFYHLIFEEEFARI-K--GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 540 ~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l-~--~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
.. |..+|+... ..+.+ . ........|++. .+.++++-...+.|..++...++
T Consensus 186 ~~-------------I~~~d~dg~-~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 186 HS-------------ISSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp TE-------------EEEEETTSC-SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred Ce-------------EEEEecCCC-ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCc
Confidence 42 666776532 22222 1 223456778885 34455555566778888865543
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.02 E-value=0.00072 Score=76.07 Aligned_cols=62 Identities=10% Similarity=-0.005 Sum_probs=46.6
Q ss_pred CccceEEEEEecC--CCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC
Q psy10063 475 AVEPINDMQFSKD--ATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG 537 (894)
Q Consensus 475 ~i~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~ 537 (894)
.+.....|+|+++ +..|+.+...+.|+.+|+..+++...+.......+|+|+++|+ |+++..
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~ 200 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDD 200 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEEC
T ss_pred ccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcC
Confidence 3456789999984 4455555544899999998888776655556789999999999 666654
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.00 E-value=0.0044 Score=70.07 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=29.1
Q ss_pred CCCCeeEEEEeeC-CcEEEEecCCCcEEEEecCccccccccc
Q psy10063 844 HFGPINSLAFHPD-GKSYASGGEDGFVRLHTFDQAYFDYTFD 884 (894)
Q Consensus 844 H~~~V~~l~fSpd-g~~LaS~s~Dg~V~vWdl~~~~~~~~~~ 884 (894)
.......|++.++ |.++++-...+.||.++++.........
T Consensus 442 ~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~~~~ 483 (496)
T 3kya_A 442 RFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVAGDE 483 (496)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC------
T ss_pred hcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcccccCC
Confidence 3455778999997 8877877788999999999887776654
No 285
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.96 E-value=0.0069 Score=67.26 Aligned_cols=100 Identities=9% Similarity=-0.079 Sum_probs=62.1
Q ss_pred EEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc----ce
Q psy10063 490 MFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE----EE 565 (894)
Q Consensus 490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~----~~ 565 (894)
+|+.+. ...|+..|+........+.....+..|+|++.+..|+.+...... |+.+++... ..
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~-------------I~~~~~~g~~~~~~~ 150 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRM-------------ICSTQLDRAHGVSSY 150 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTE-------------EEEEEC------CCC
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCe-------------EEEEEcccCCCCCcc
Confidence 444443 467888899877766666667789999999988888888765542 555665531 12
Q ss_pred EEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECC
Q psy10063 566 FARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLS 603 (894)
Q Consensus 566 ~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~ 603 (894)
...+.........|++.+.++.|+.. ...+.|.+.+++
T Consensus 151 ~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 151 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred eEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 22233344566788888754444443 345566666554
No 286
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.90 E-value=0.0064 Score=73.33 Aligned_cols=113 Identities=4% Similarity=-0.109 Sum_probs=67.9
Q ss_pred ceEEEEEecCCCEEE-EEECCCCEEEEEcCCC----cEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063 478 PINDMQFSKDATMFI-TASKDHTAKLFTTHDR----QLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG 551 (894)
Q Consensus 478 ~V~~l~~spdg~~L~-sgs~Dg~V~iwdl~~~----~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~ 551 (894)
.+..|+|.+...+|+ +-...+.|+.+++... .....+. .......|++.+.++.|+++......
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~---------- 494 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT---------- 494 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTE----------
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCe----------
Confidence 466777777444444 4344567888887642 2233333 23567899999999888888765542
Q ss_pred eeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC--CcEEEEECC
Q psy10063 552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED--GFLISNTLS 603 (894)
Q Consensus 552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D--g~I~vwdl~ 603 (894)
|.+.++........+.........|+++|.+.+|+..... +.|.+.+++
T Consensus 495 ---I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 495 ---VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp ---EEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred ---EEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 6777776443333333344567899999876666655432 456655554
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.89 E-value=0.01 Score=65.86 Aligned_cols=185 Identities=9% Similarity=-0.047 Sum_probs=112.2
Q ss_pred cCCCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCC----eEEEEecCCCCCCeeEEEEcCCCCEEEEEeC---------
Q psy10063 407 DQSAKITSLLWGNLDQYIITG-HAKGDICTWDLRMG----RELESISGHAKEPINDMQFSKDATMFITASH--------- 472 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg----~~~~~l~~h~~~~V~~v~~spdg~~la~~~~--------- 472 (894)
.....+.+|+|++.++.|+.. ...+.|+.+++... .....+..... ....|++.+.+..|.....
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~-~p~glavD~~~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ-APDGLAVDWIHSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC-CcccEEEEecCCceEEEECCCCeEEEEe
Confidence 345788999999876666655 45678999998752 22333332333 6778888875554444332
Q ss_pred -CCCc---------cceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCC
Q psy10063 473 -SQAV---------EPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQE 539 (894)
Q Consensus 473 -d~~i---------~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~ 539 (894)
++.. .....|++.|.+.+|+.... .+.|...++........+.. -.....|+|++++.+|+++....
T Consensus 188 ~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 188 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 2221 34678899987666666543 36788888765444333333 36789999999999999887655
Q ss_pred CeEEEeccCccceeeEEEEeccccceEEEcc--CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063 540 AREVTTTSTKVGKFDARFYHLIFEEEFARIK--GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 540 ~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~--~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
.. |+.+|+........+. +......+|++. .+.++++-...+.|..++...++
T Consensus 268 ~~-------------I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 268 HS-------------ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp TE-------------EEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCC
T ss_pred CE-------------EEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCC
Confidence 42 6666765333222222 223455677773 33444555556778888855543
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.82 E-value=0.0042 Score=66.65 Aligned_cols=182 Identities=6% Similarity=-0.063 Sum_probs=108.3
Q ss_pred CCEEEEEEccCCCEEEE-ecCCCcEEEEecCCCeEE-EEecCCCCCCeeEEEEcCCCCEEEEEe----------CCCCc-
Q psy10063 410 AKITSLLWGNLDQYIIT-GHAKGDICTWDLRMGREL-ESISGHAKEPINDMQFSKDATMFITAS----------HSQAV- 476 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~s-gs~Dg~I~iWd~~tg~~~-~~l~~h~~~~V~~v~~spdg~~la~~~----------~d~~i- 476 (894)
..+.+|+|.+.++.|+. -...+.|+.+++..+... ..+..... ....+++.+.+..|.... .++..
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~-~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL-SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCS-CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCC-CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence 35678999986555554 455678999998765321 12222222 456777776544443332 22221
Q ss_pred --------cceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063 477 --------EPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTT 545 (894)
Q Consensus 477 --------~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~ 545 (894)
.....|++.|.+.+|+.+.. .+.|..+++........+.. -.....|+|++++..|+.+......
T Consensus 114 ~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~---- 189 (318)
T 3sov_A 114 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF---- 189 (318)
T ss_dssp EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE----
T ss_pred EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCE----
Confidence 34578889987666666653 46777777753332222222 3567899999999999888765542
Q ss_pred ccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063 546 TSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 546 ~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
|..+|+........+.+.......|++.. +.++++-...+.|..++...++
T Consensus 190 ---------I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 190 ---------IHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp ---------EEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred ---------EEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCC
Confidence 66677653322222233445567788753 3444554556778888876554
No 289
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.74 E-value=0.00043 Score=82.58 Aligned_cols=193 Identities=11% Similarity=0.065 Sum_probs=108.1
Q ss_pred CEEEEEEccCCCEEEEecC-CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEe-CCCCc--cceEEE----
Q psy10063 411 KITSLLWGNLDQYIITGHA-KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITAS-HSQAV--EPINDM---- 482 (894)
Q Consensus 411 ~V~~l~~spdg~~L~sgs~-Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~-~d~~i--~~V~~l---- 482 (894)
...++++..+|+++++|+. +..+.+||..+++....-..+....-.++++.++|++++.|+ .++.. ..+...
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 3445778889999999984 458999999888765433222221334567778999999998 33321 111110
Q ss_pred -EE--------------------ecCCCEEEEEECCC---------CEEEEEcCCCcEEEEEeCC----------CCeeE
Q psy10063 483 -QF--------------------SKDATMFITASKDH---------TAKLFTTHDRQLLKTYTTE----------RPVNS 522 (894)
Q Consensus 483 -~~--------------------spdg~~L~sgs~Dg---------~V~iwdl~~~~~~~~~~~~----------~~v~~ 522 (894)
.| ..+++.++.|+.+| .|.+||............. ..-.+
T Consensus 324 ~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~a 403 (656)
T 1k3i_A 324 KTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNA 403 (656)
T ss_dssp TEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEE
T ss_pred CcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCce
Confidence 01 12344455665544 4678888877655433321 12244
Q ss_pred EEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc--cCCCCCe-EEEEEecCCCEEEEEeCC----
Q psy10063 523 AALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI--KGHFGPI-NSLAFHPDGKSYASGGED---- 594 (894)
Q Consensus 523 l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l--~~h~~~V-~~l~~spdg~~l~sgs~D---- 594 (894)
+.|.. +++.+++|+.++... .........|.+||....+..... ..+.... .++++.++|++++.|+.+
T Consensus 404 v~~~~~~~~i~v~GG~~~~~~---~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~ 480 (656)
T 1k3i_A 404 VMYDAVKGKILTFGGSPDYQD---SDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIP 480 (656)
T ss_dssp EEEETTTTEEEEECCBSSSSS---SBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCT
T ss_pred EeccCCCCeEEEEeCCCCCCC---CCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcC
Confidence 55544 566666665432100 000001113677787766554433 2233332 345667899999998854
Q ss_pred -------CcEEEEECCCCc
Q psy10063 595 -------GFLISNTLSNGL 606 (894)
Q Consensus 595 -------g~I~vwdl~~~~ 606 (894)
..+.+||.+..+
T Consensus 481 ~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 481 FEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp TCCCSBCCCCEEEEGGGTE
T ss_pred cCCCCcccceEEEcCCCCc
Confidence 457899887654
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.73 E-value=0.013 Score=62.67 Aligned_cols=77 Identities=9% Similarity=-0.088 Sum_probs=50.6
Q ss_pred CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcccccc
Q psy10063 802 CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDY 881 (894)
Q Consensus 802 ~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~ 881 (894)
...++|++++.+|+.+-.... .|+.+|++.......+.+.......|++. .+.++++-...+.|..++...++...
T Consensus 168 Pnglavd~~~~~lY~aD~~~~---~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~ 243 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLN---FIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLR 243 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTT---EEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred ccEEEEeccCCEEEEEECCCC---EEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceE
Confidence 347889999998888765433 69999987443322233344556678875 44556666677888888886665443
Q ss_pred c
Q psy10063 882 T 882 (894)
Q Consensus 882 ~ 882 (894)
.
T Consensus 244 ~ 244 (318)
T 3sov_A 244 E 244 (318)
T ss_dssp E
T ss_pred E
Confidence 3
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.72 E-value=0.0037 Score=66.88 Aligned_cols=112 Identities=11% Similarity=0.134 Sum_probs=78.1
Q ss_pred ceEEEEE--ecC-CC-EEEEEECCCCEEEEEcC-------CCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063 478 PINDMQF--SKD-AT-MFITASKDHTAKLFTTH-------DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTT 546 (894)
Q Consensus 478 ~V~~l~~--spd-g~-~L~sgs~Dg~V~iwdl~-------~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~ 546 (894)
.++.||+ ++. ++ ++++...+|.+..|++. ..++++.|.....+..|++.+...+|+++-.+..
T Consensus 129 ~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G------ 202 (355)
T 3amr_A 129 EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA------ 202 (355)
T ss_dssp SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE------
T ss_pred CeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccce------
Confidence 4556666 553 44 57777888999999883 3467888888889999999999999999988854
Q ss_pred cCccceeeEEEEecc-----ccceEEEcc-CC-CCCeEEEEEe--cCCC-EEEEEe-CCCcEEEEECC
Q psy10063 547 STKVGKFDARFYHLI-----FEEEFARIK-GH-FGPINSLAFH--PDGK-SYASGG-EDGFLISNTLS 603 (894)
Q Consensus 547 ~~~~~~~~v~vwd~~-----~~~~~~~l~-~h-~~~V~~l~~s--pdg~-~l~sgs-~Dg~I~vwdl~ 603 (894)
|+.++.+ .++.+..+. +| ...+..|++- ++++ ||++.+ .+..+.|||.+
T Consensus 203 --------Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 203 --------IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp --------EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred --------EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 3444433 234444442 23 3478888884 5555 565555 57789999986
No 292
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.72 E-value=0.014 Score=70.40 Aligned_cols=184 Identities=9% Similarity=-0.058 Sum_probs=110.2
Q ss_pred cCCCCEEEEEEccCCCEEEE-ecCCCcEEEEecCCC----eEEEEecCCCCCCeeEEEEcCCCCEEEEEeC---------
Q psy10063 407 DQSAKITSLLWGNLDQYIIT-GHAKGDICTWDLRMG----RELESISGHAKEPINDMQFSKDATMFITASH--------- 472 (894)
Q Consensus 407 ~H~~~V~~l~~spdg~~L~s-gs~Dg~I~iWd~~tg----~~~~~l~~h~~~~V~~v~~spdg~~la~~~~--------- 472 (894)
.....+.+|+|.+.+.+|+. -...+.|+.+++... .....+..... ....|++.+.++.|+.+..
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~-~P~GLAvD~~~~~LY~tD~~~~~I~v~~ 499 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ-APDGLAVDWIHSNIYWTDSVLGTVSVAD 499 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS-CCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCC-CcceeeeeecCCcEEEEecCCCeEEEEe
Confidence 34567889999986555554 445678999998753 22333433333 6778888887766554432
Q ss_pred -CCCc---------cceEEEEEecCCCEEEEEEC-C-CCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCC
Q psy10063 473 -SQAV---------EPINDMQFSKDATMFITASK-D-HTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQE 539 (894)
Q Consensus 473 -d~~i---------~~V~~l~~spdg~~L~sgs~-D-g~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~ 539 (894)
++.. .....|++.|.+.+|+.... . +.|.+.++........+... .....|++++.+.+|+++....
T Consensus 500 ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~ 579 (791)
T 3m0c_C 500 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 579 (791)
T ss_dssp TTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCC
Confidence 2221 35678999997666666553 2 67888888644444444433 5789999999989998887655
Q ss_pred CeEEEeccCccceeeEEEEeccccceEEEccC--CCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCc
Q psy10063 540 AREVTTTSTKVGKFDARFYHLIFEEEFARIKG--HFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGL 606 (894)
Q Consensus 540 ~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~--h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~ 606 (894)
.. |+++++........+.. ......+|++. +.+|+... ..+.|...+...++
T Consensus 580 ~~-------------I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 580 HS-------------ISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp TE-------------EEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCC
T ss_pred Cc-------------EEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCc
Confidence 32 66666654333333322 22344566663 33455444 45667777655543
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.65 E-value=0.0029 Score=67.08 Aligned_cols=169 Identities=13% Similarity=0.116 Sum_probs=105.9
Q ss_pred EecCCCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEE-ecCCC--CCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063 405 VTDQSAKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELES-ISGHA--KEPINDMQFSKDATMFITASHSQAVEPIN 480 (894)
Q Consensus 405 l~~H~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~-l~~h~--~~~V~~v~~spdg~~la~~~~d~~i~~V~ 480 (894)
+......--+++|.+...+|+.+ -..+.|..||...+..... +.+-. + ++. ..+.
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g----------~~~-----------~~~s 66 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNG----------DGE-----------QQMS 66 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSS----------CCS-----------EEEE
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccC----------CCc-----------ceee
Confidence 44455556688998755555544 4789999999876644333 22100 1 000 0245
Q ss_pred EEEE---ecCCCEEEEEE-------------CCCCEEEEEcC---CCcEEEEEeCC--------------CCeeEEEEcC
Q psy10063 481 DMQF---SKDATMFITAS-------------KDHTAKLFTTH---DRQLLKTYTTE--------------RPVNSAALSP 527 (894)
Q Consensus 481 ~l~~---spdg~~L~sgs-------------~Dg~V~iwdl~---~~~~~~~~~~~--------------~~v~~l~~sp 527 (894)
.|.| .++++++++.. .+..|..||+. +++.+..+... .....++..+
T Consensus 67 Gl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~ 146 (334)
T 2p9w_A 67 GLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR 146 (334)
T ss_dssp EEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT
T ss_pred EEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC
Confidence 5666 45655555432 26779999999 78877766531 2478999999
Q ss_pred CCCEEEEEECC-CCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063 528 ILPHVVLGGGQ-EAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS 603 (894)
Q Consensus 528 dg~~l~~~~~~-~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~ 603 (894)
+|...++++.. +. ||.++.... .+..|.+... ..........|+++|+|+.|+.....|.|..+|+.
T Consensus 147 ~GnaYVt~s~~~~~--I~rV~pdG~--~~~~~~~~~~-----~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 147 DGNSYVAFALGMPA--IARVSADGK--TVSTFAWESG-----NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp TSCEEEEEEESSCE--EEEECTTSC--CEEEEEECCC-----CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred CCCEEEeCCCCCCe--EEEEeCCCC--EEeeeeecCC-----CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 99988887766 54 333333322 1445544321 11223346799999999988888779999999987
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.62 E-value=0.2 Score=58.76 Aligned_cols=126 Identities=3% Similarity=-0.113 Sum_probs=77.9
Q ss_pred CCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeC-----------CCCc-
Q psy10063 410 AKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH-----------SQAV- 476 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~-----------d~~i- 476 (894)
.....|++...++.|+.+ ...+.|.+.++........+..... ....|++.|...+|..... ||..
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~-~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLD-SPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER 158 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCC-CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCC-CcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce
Confidence 456788888776655544 4567899999874432222323333 6889999986555554442 2211
Q ss_pred -------cceEEEEEecCCCEEEEEE-CCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCC
Q psy10063 477 -------EPINDMQFSKDATMFITAS-KDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQE 539 (894)
Q Consensus 477 -------~~V~~l~~spdg~~L~sgs-~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~ 539 (894)
.....|++++++++|+.+. ..+.|..+|+..... +.+. .......|++.. .+|+......
T Consensus 159 ~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~~~ 227 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDWSR 227 (628)
T ss_dssp EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEETTT
T ss_pred EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecCCC
Confidence 3556889999777776664 457788899875444 2333 334566787764 4666666433
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.61 E-value=0.0095 Score=64.84 Aligned_cols=57 Identities=25% Similarity=0.243 Sum_probs=37.4
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE--Ee----CCCCeeEEEEcCC---CCEEEEEEC
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT--YT----TERPVNSAALSPI---LPHVVLGGG 537 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~--~~----~~~~v~~l~~spd---g~~l~~~~~ 537 (894)
.-+.|+|.|+|++++ +..+|.|++++ +++.... +. .......|+|+|+ +.+|+++..
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEe
Confidence 467788888887444 45668888887 4442211 11 2357899999998 667766654
No 296
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.59 E-value=0.0086 Score=61.62 Aligned_cols=151 Identities=11% Similarity=0.071 Sum_probs=89.8
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCc---EEEEEeC-------CCCeeEEEEcCCCCEEEEEECCCCeEEEecc
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQ---LLKTYTT-------ERPVNSAALSPILPHVVLGGGQEAREVTTTS 547 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~---~~~~~~~-------~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~ 547 (894)
....|++.+++.++++.-.++.|.++++.... .+..+.. ......|+|+|++.+|+++.......+|.++
T Consensus 71 D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 71 DLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp SEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred ChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 56678888888777776677889999886543 2233321 2346899999999999998877765555443
Q ss_pred CccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCcc----cc--------CCCce
Q psy10063 548 TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLD----IS--------EGSFT 614 (894)
Q Consensus 548 ~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~----~~--------~~~~v 614 (894)
......++.+.+... . .-..+...+.+|+++|... +++.....+.|.++|.+.... +. .....
T Consensus 151 g~~~~~~l~i~~~~~--~--~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qp 226 (255)
T 3qqz_A 151 GLLSSNELHISKDKA--L--QRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQA 226 (255)
T ss_dssp STTCSSCCEEEECHH--H--HHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSE
T ss_pred ccccCCceeeecchh--h--ccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCC
Confidence 111110112211100 0 0012344678999998654 444445566677777665421 11 12356
Q ss_pred eeeEECcCCcEEEecCCe
Q psy10063 615 SSSTQQPDGLVYPSQGGH 632 (894)
Q Consensus 615 ~~~~~spdg~~l~~~~g~ 632 (894)
..++|.++|.++......
T Consensus 227 EGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 227 EGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp EEEEECTTCCEEEEETTT
T ss_pred CeeEECCCCCEEEEcCCc
Confidence 788899988877555544
No 297
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.56 E-value=0.019 Score=62.52 Aligned_cols=213 Identities=11% Similarity=0.056 Sum_probs=104.7
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe-EEEEec--CCCCCCeeEEEEcCC---CCEEEEE-eC---C----C
Q psy10063 409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR-ELESIS--GHAKEPINDMQFSKD---ATMFITA-SH---S----Q 474 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~-~~~~l~--~h~~~~V~~v~~spd---g~~la~~-~~---d----~ 474 (894)
-....+|+|.|||++++ +..+|.|+++| ..|+ .+..+. .........|+|+|+ +.+|.++ .. + .
T Consensus 28 l~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 45678888999887444 44558888887 4454 222221 111126788888887 4443332 21 1 1
Q ss_pred Cc---------------------------cceEEEEEecCCCEEEEEECC-------------CCEEEEEcCCCcE----
Q psy10063 475 AV---------------------------EPINDMQFSKDATMFITASKD-------------HTAKLFTTHDRQL---- 510 (894)
Q Consensus 475 ~i---------------------------~~V~~l~~spdg~~L~sgs~D-------------g~V~iwdl~~~~~---- 510 (894)
.| .....|+|.|||.++++.+.. |.|..++.. ++.
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCC
Confidence 11 122457888888766654321 334333332 220
Q ss_pred ----EEEE-eCCCCeeEEEEcC-CCCEEEEEECCCC-eEEEeccCccceeeEEEEecccc--------ceEEEccCCCCC
Q psy10063 511 ----LKTY-TTERPVNSAALSP-ILPHVVLGGGQEA-REVTTTSTKVGKFDARFYHLIFE--------EEFARIKGHFGP 575 (894)
Q Consensus 511 ----~~~~-~~~~~v~~l~~sp-dg~~l~~~~~~~~-~~v~~~~~~~~~~~v~vwd~~~~--------~~~~~l~~h~~~ 575 (894)
...+ .+......|+|++ +|.++++-...+. -.+..+... +. .-|....+ ..+..+......
T Consensus 185 pf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G-~n---yGwp~~~g~~~~~~~~~p~~~~~~~~~a 260 (354)
T 3a9g_A 185 PFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKG-GN---YGWPLATGKAGRGEFVDPVIDTGSETWA 260 (354)
T ss_dssp SSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTT-CB---CCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred CCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCC-Cc---CCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence 1111 1234467899999 5554443332221 111111100 00 00110000 122222112235
Q ss_pred eEEEEEe-------cCCCEEEEEeCCCcEEEEECCCCc------cccC--CCceeeeEECcCCcEEEe
Q psy10063 576 INSLAFH-------PDGKSYASGGEDGFLISNTLSNGL------DISE--GSFTSSSTQQPDGLVYPS 628 (894)
Q Consensus 576 V~~l~~s-------pdg~~l~sgs~Dg~I~vwdl~~~~------~~~~--~~~v~~~~~spdg~~l~~ 628 (894)
...++|. .+|.++++.-..+.|...+++... .+.. ...+..+++.|||.+++.
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~ 328 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIS 328 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEE
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEE
Confidence 6788883 567777666666778888877431 1111 234667777888765543
No 298
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.51 E-value=0.058 Score=60.72 Aligned_cols=60 Identities=10% Similarity=0.191 Sum_probs=39.4
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe---------CCCCeeEEEEcCC---CCEEEEEEC
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---------TERPVNSAALSPI---LPHVVLGGG 537 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---------~~~~v~~l~~spd---g~~l~~~~~ 537 (894)
..++|+|.|+|++|++-...+.|++++..+++...... ....+..|+|+|+ +.+|++...
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 57788898988866654333468888766565433221 2356779999997 667766653
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.48 E-value=0.00066 Score=81.28 Aligned_cols=88 Identities=3% Similarity=-0.153 Sum_probs=46.0
Q ss_pred EEEeeCCCCCEEE-EecCCCcEEEEEccCCce--eecc---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcce
Q psy10063 764 FKMPEPPKREKLA-LALADKVSERYRDRKNKA--TAGF---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE 837 (894)
Q Consensus 764 ~~la~spdg~~La-tgs~Dg~I~iwd~~~~~~--~~~~---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~ 837 (894)
..|+|+|++.+|+ +-...+.|+++++..... +... ......+++ ++.+|+.+..... .|++++..+|+.
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glav--d~~~lywtd~~~~---~V~~~d~~~G~~ 617 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINE---AIFSANRLTGSD 617 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEE--ETTEEEEECSTTT---CEEEEETTTEEE
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEE--ECCEEEEEeCCCC---eEEEEEccCCCc
Confidence 3466666544433 334455677776643221 1111 111123333 4556666554332 589999888888
Q ss_pred eeeccCCCCCeeEEEEeeC
Q psy10063 838 FARIKGHFGPINSLAFHPD 856 (894)
Q Consensus 838 l~~l~gH~~~V~~l~fSpd 856 (894)
+..+.........|++...
T Consensus 618 ~~~i~~~~~~P~~i~v~~~ 636 (699)
T 1n7d_A 618 VNLLAENLLSPEDMVLFHQ 636 (699)
T ss_dssp EECCCTTCSSCCCCCBCSS
T ss_pred eEEeecCCCCCcEEEEeCc
Confidence 8777654444555655433
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.45 E-value=0.00061 Score=81.56 Aligned_cols=79 Identities=10% Similarity=-0.129 Sum_probs=49.5
Q ss_pred CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc--CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063 801 SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK--GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY 878 (894)
Q Consensus 801 ~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~--gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~ 878 (894)
....++|++++.+|+++-.... .|+++++........+. +.......|++..+ .++++....+.|.+++...++
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~---~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLH---SISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTT---EEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEE
T ss_pred CccEEEEeccCCEEEEEecCCC---eEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCC
Confidence 3457899999888888765432 59999987433222222 22233445666543 556666667889999876666
Q ss_pred ccccc
Q psy10063 879 FDYTF 883 (894)
Q Consensus 879 ~~~~~ 883 (894)
.+..+
T Consensus 617 ~~~~i 621 (699)
T 1n7d_A 617 DVNLL 621 (699)
T ss_dssp EEECC
T ss_pred ceEEe
Confidence 55444
No 301
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.44 E-value=0.53 Score=59.16 Aligned_cols=111 Identities=8% Similarity=-0.044 Sum_probs=67.3
Q ss_pred CCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec-c--ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc
Q psy10063 760 VDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG-F--LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE 836 (894)
Q Consensus 760 ~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~-~--~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~ 836 (894)
.+.|.+|+-- .| +|++|- ...|++|++...+.+.. . ...+..+.+...+.+++++..-++ ..+..|+...++
T Consensus 885 ~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~S--v~~~~y~~~~~~ 959 (1158)
T 3ei3_A 885 KGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRS--VLLLAYKPMEGN 959 (1158)
T ss_dssp SSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBC--EEEEEEETTTTE
T ss_pred CCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhhe--EEEEEEEcCCCe
Confidence 4567777644 34 455443 36799999987654441 1 111112234456778877766553 234445555444
Q ss_pred eeeecc-CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063 837 EFARIK-GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ 876 (894)
Q Consensus 837 ~l~~l~-gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~ 876 (894)
+...-+ .+..+|+++.|-.++ .++.+..+|.|.+.++..
T Consensus 960 L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 960 FEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred EEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence 433222 356778899998765 567788999999998765
No 302
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.38 E-value=0.46 Score=57.18 Aligned_cols=171 Identities=15% Similarity=0.130 Sum_probs=96.2
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV------------- 476 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------------- 476 (894)
..|.++....+| .|..|..+| |.+||..+++.......... .|.++.. .+| .|.++..+|-.
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~-~i~~i~~-~~g-~lWigt~~Gl~~~~~~~~~~~~~~ 137 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPT-DVRTMAL-QGD-TLWLGALNGLYTYQLQSRKLTSFD 137 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCS-CEEEEEE-ETT-EEEEEETTEEEEEETTTCCEEEEC
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCc-eEEEEEe-cCC-cEEEEcCCcceeEeCCCCeEEEec
Confidence 468888877766 566666555 78999887654321111112 4666654 344 33333332211
Q ss_pred --------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-------CCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063 477 --------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-------ERPVNSAALSPILPHVVLGGGQEAR 541 (894)
Q Consensus 477 --------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-------~~~v~~l~~spdg~~l~~~~~~~~~ 541 (894)
..|.+|....+|.+.+ |..+| |..|+...++... +.. ...|.++....++..|.++...|
T Consensus 138 ~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~G-- 212 (758)
T 3ott_A 138 TRRNGLPNNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGY-- 212 (758)
T ss_dssp HHHHCCSCSCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEE--
T ss_pred cCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEECCC--
Confidence 2466676666777555 44444 7778877765432 221 12478888888777777766433
Q ss_pred EEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063 542 EVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 542 ~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~ 605 (894)
|..++...++...........|.+|....+|.+.+ |.. +-|.+++....
T Consensus 213 -------------l~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~ 261 (758)
T 3ott_A 213 -------------LFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTT 261 (758)
T ss_dssp -------------EEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTS
T ss_pred -------------CeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCC
Confidence 45555554432211111233578888877777554 444 45778877654
No 303
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.36 E-value=0.16 Score=54.53 Aligned_cols=58 Identities=12% Similarity=0.022 Sum_probs=40.3
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE--E-----eCCCCeeEEEEcCC---CCEEEEE
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT--Y-----TTERPVNSAALSPI---LPHVVLG 535 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~--~-----~~~~~v~~l~~spd---g~~l~~~ 535 (894)
..+.|+|.|||.+|++--..|.|++++...++.... + ........|+|+|+ ..+|++.
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 578889999998766654488899888766654322 1 12467899999996 4556554
No 304
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.32 E-value=0.024 Score=61.60 Aligned_cols=93 Identities=13% Similarity=0.178 Sum_probs=55.1
Q ss_pred CccceeeeeccCccEEEecCCCeEEEEE-------------ecCCCCEEEEEEccC---CCEEEEecC-C-----CcEEE
Q psy10063 378 LSVDRLNSMSPAARKLATNAEPVVKMQV-------------TDQSAKITSLLWGNL---DQYIITGHA-K-----GDICT 435 (894)
Q Consensus 378 ~~~~~~~~~s~dg~~l~~~~~~~~~~~l-------------~~H~~~V~~l~~spd---g~~L~sgs~-D-----g~I~i 435 (894)
....+.++|.+||++++......+.+.- .........|+|+|+ +++|+.+.. . ..|..
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 4445667788888877765544333211 112357889999998 555555433 2 56888
Q ss_pred EecCCCe-----E-EEEec---CCCCCCeeEEEEcCCCCEEEEEe
Q psy10063 436 WDLRMGR-----E-LESIS---GHAKEPINDMQFSKDATMFITAS 471 (894)
Q Consensus 436 Wd~~tg~-----~-~~~l~---~h~~~~V~~v~~spdg~~la~~~ 471 (894)
|++..++ . +..+. +... ....|+|.|||.++++.+
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h-~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLH-SGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCC-CCCCEEECTTSCEEEECC
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCc-CCceEEECCCCCEEEEEC
Confidence 8877441 1 22233 1111 346899999997666643
No 305
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.29 E-value=0.013 Score=65.60 Aligned_cols=113 Identities=11% Similarity=0.111 Sum_probs=70.6
Q ss_pred EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEE------EEeCCCCccceEEEEEec---CCCEEEE
Q psy10063 423 YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFI------TASHSQAVEPINDMQFSK---DATMFIT 493 (894)
Q Consensus 423 ~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la------~~~~d~~i~~V~~l~~sp---dg~~L~s 493 (894)
.+.||+..|.|+|+-+.+++.++.+..-...+-..--|..+.+.++ ..++. .--.+++.. ||++|+.
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~----HHp~~S~tdg~yDGrylfi 147 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDC----HHPHISMTDGKYDGKYLFI 147 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCC----CCCEEEEETTEEEEEEEEE
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCc----CCCcccccCCeeeeEEEEE
Confidence 4668899999999999999999888632110000000000000000 00000 112233332 6888888
Q ss_pred EE-CCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEc--CCCCEEEEEECCC
Q psy10063 494 AS-KDHTAKLFTTHDRQLLKTYTT--ERPVNSAALS--PILPHVVLGGGQE 539 (894)
Q Consensus 494 gs-~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~s--pdg~~l~~~~~~~ 539 (894)
-. ....|-..+++..++-+.++. ...+.+++|- |.-.|+++++...
T Consensus 148 Ndkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~ 198 (638)
T 3sbq_A 148 NDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFI 198 (638)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSC
T ss_pred ecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceee
Confidence 76 456788889999999888875 4778999997 6888988888654
No 306
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.27 E-value=0.14 Score=54.07 Aligned_cols=86 Identities=13% Similarity=0.033 Sum_probs=47.7
Q ss_pred CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEE--CCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCC
Q psy10063 498 HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGG--GQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP 575 (894)
Q Consensus 498 g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~--~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~ 575 (894)
..|+..++..++....... .+..|++++++|+... .++.. .|...++. |.....|..+..
T Consensus 88 ~~Iy~i~~dg~~~~~l~~~----~~~~~s~~g~~Iy~~~~~~~~~~------------~Iy~~~~d-Gs~~~~lt~~~~- 149 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLDPD----PCIYASLIGNYIYYLHYDTQTAT------------SLYRIRID-GEEKKKIKNHYL- 149 (302)
T ss_dssp EEEEEEETTSCCCEEEECS----CEEEEEEETTEEEEEEESSSSCE------------EEEEEETT-SCCCEEEESSCC-
T ss_pred CeEEEEeCCCCcceEeecC----CccEEEEeCCEEEEEeecCCCCc------------eEEEEECC-CCCeEEEeCCCc-
Confidence 4567777766553333222 2346788999998876 23322 25555555 333344443432
Q ss_pred eEEEEEecCCCEEEEEeC-CCcEEEEECCC
Q psy10063 576 INSLAFHPDGKSYASGGE-DGFLISNTLSN 604 (894)
Q Consensus 576 V~~l~~spdg~~l~sgs~-Dg~I~vwdl~~ 604 (894)
++|+++++.|+-.+. ...|.+.+++.
T Consensus 150 ---~~~~~~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 150 ---FTCNTSDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp ---CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred ---eEeeEECCEEEEEeCCCceEEEEECCC
Confidence 446678888876654 45566655544
No 307
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.23 E-value=0.03 Score=60.13 Aligned_cols=153 Identities=10% Similarity=0.102 Sum_probs=85.3
Q ss_pred EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEec--CCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063 404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDL--RMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND 481 (894)
Q Consensus 404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~--~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~ 481 (894)
...++...+.++++.+++++++.+...+.++-+|- .+.+.+. ..... .+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~-------------------------~~~~ 209 (327)
T 2xbg_A 157 LVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSR-------------------------RLHN 209 (327)
T ss_dssp EECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSS-------------------------CEEE
T ss_pred eecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCC-------------------------ccce
Confidence 33456678899999999888877755444444442 2222221 12222 4566
Q ss_pred EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-----CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063 482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-----ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR 556 (894)
Q Consensus 482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-----~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~ 556 (894)
+++.+++.+++ ++.+|.|++++...|+....+.. ...+.+++|.+++..++++ .++.+
T Consensus 210 ~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i--------------- 272 (327)
T 2xbg_A 210 MGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL--------------- 272 (327)
T ss_dssp EEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE---------------
T ss_pred eEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE---------------
Confidence 66666665443 44567666654333443333321 2358899999877766554 45542
Q ss_pred EEeccccceEEEcc---CCCCCeEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10063 557 FYHLIFEEEFARIK---GHFGPINSLAFHPDGKSYASGGEDGFLISNT 601 (894)
Q Consensus 557 vwd~~~~~~~~~l~---~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwd 601 (894)
++....|+.-..+. .+...+.+|.|..++. ++.++.+|.|..++
T Consensus 273 ~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 273 LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 12222233323332 2345678898876554 66667788776665
No 308
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.20 E-value=0.062 Score=58.35 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=52.0
Q ss_pred CccceeeeeccCccEEEecCCCeEEEE-------E------ecCCCCEEEEEEccC---CCEEEEecC----C----CcE
Q psy10063 378 LSVDRLNSMSPAARKLATNAEPVVKMQ-------V------TDQSAKITSLLWGNL---DQYIITGHA----K----GDI 433 (894)
Q Consensus 378 ~~~~~~~~~s~dg~~l~~~~~~~~~~~-------l------~~H~~~V~~l~~spd---g~~L~sgs~----D----g~I 433 (894)
....+.++|.+||++++......+.+. + .........|+|+|+ +.+|+.+.. + ..|
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 334455667777776665544333221 1 112356889999998 555554432 2 567
Q ss_pred EEEecCCC-------eEE-EEecCCCCCCeeEEEEcCCCCEEEEEe
Q psy10063 434 CTWDLRMG-------REL-ESISGHAKEPINDMQFSKDATMFITAS 471 (894)
Q Consensus 434 ~iWd~~tg-------~~~-~~l~~h~~~~V~~v~~spdg~~la~~~ 471 (894)
..|++..+ +.+ ..+.....-....|+|.|||.++++.+
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 77877654 111 223211100346799999998777644
No 309
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.15 E-value=0.33 Score=50.96 Aligned_cols=105 Identities=11% Similarity=0.065 Sum_probs=67.9
Q ss_pred EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-
Q psy10063 484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF- 562 (894)
Q Consensus 484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~- 562 (894)
.+|..+.||.-. ...|+|+|++..+.++.+.....|..-.|-.+ +.|+...... |.-|++..
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L~lVT~ta---------------VyHWs~~~~ 136 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVALVTDNA---------------VYHWSMEGE 136 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSS-SEEEEEESSE---------------EEEEESSTT
T ss_pred eCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCC-CeEEEEcCCc---------------EEEEcccCC
Confidence 356666666554 57899999999999999999889988888765 4555555443 55565542
Q ss_pred cceEEEccCCC----CCeEEEEEecCCCEEEEEeC-------CCcEEEEECCCC
Q psy10063 563 EEEFARIKGHF----GPINSLAFHPDGKSYASGGE-------DGFLISNTLSNG 605 (894)
Q Consensus 563 ~~~~~~l~~h~----~~V~~l~~spdg~~l~sgs~-------Dg~I~vwdl~~~ 605 (894)
..+++.+..|. ..|..-..+++.++++..+- .|.+.+|..+.+
T Consensus 137 s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~ 190 (365)
T 2xzh_A 137 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 190 (365)
T ss_dssp CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT
T ss_pred CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc
Confidence 23333343332 35666667778887665442 245667766554
No 310
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.06 E-value=0.15 Score=54.74 Aligned_cols=52 Identities=12% Similarity=0.114 Sum_probs=28.4
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc------cC--CCceeeeEECcCCcEE
Q psy10063 574 GPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI------SE--GSFTSSSTQQPDGLVY 626 (894)
Q Consensus 574 ~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~------~~--~~~v~~~~~spdg~~l 626 (894)
.....|+|. +|..++..-..+.|....++....+ .. ...+..++..|||.++
T Consensus 263 ~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~ly 322 (347)
T 3das_A 263 ASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLW 322 (347)
T ss_dssp CCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEE
T ss_pred CCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEE
Confidence 356677776 4665665555566666666544211 11 1235556666666544
No 311
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.02 E-value=0.56 Score=51.20 Aligned_cols=70 Identities=11% Similarity=-0.094 Sum_probs=50.0
Q ss_pred eecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccc
Q psy10063 807 FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFD 880 (894)
Q Consensus 807 fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~ 880 (894)
.|+.-..++....-+ -|++||+++|.++..-+-..+.|..-+......-++.....|.|.--.+++..++
T Consensus 266 vs~kygviyviTK~G----~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 266 ISEKHDVVFLITKYG----YIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp EETTTTEEEEEETTS----EEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred ecccCCEEEEEecCc----eEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccch
Confidence 455555555555554 5999999999999877777777876666666555666668888887777766554
No 312
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.94 E-value=0.07 Score=57.93 Aligned_cols=55 Identities=18% Similarity=0.258 Sum_probs=35.3
Q ss_pred CCeEEEEEec-------CCCEEEEEeCCCcEEEEECCCCcccc-------CCCceeeeEECcCCcEEEe
Q psy10063 574 GPINSLAFHP-------DGKSYASGGEDGFLISNTLSNGLDIS-------EGSFTSSSTQQPDGLVYPS 628 (894)
Q Consensus 574 ~~V~~l~~sp-------dg~~l~sgs~Dg~I~vwdl~~~~~~~-------~~~~v~~~~~spdg~~l~~ 628 (894)
..+..++|.. +|.+|++.-..+.|...+++.++... ....+..+++.|||.+++.
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~ 339 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVL 339 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEE
Confidence 4567788863 46677766667778888776543211 1235667888888876653
No 313
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.81 E-value=0.12 Score=54.27 Aligned_cols=27 Identities=26% Similarity=0.402 Sum_probs=19.6
Q ss_pred eCCcEEEEecCCC-----cEEEEecCcccccc
Q psy10063 855 PDGKSYASGGEDG-----FVRLHTFDQAYFDY 881 (894)
Q Consensus 855 pdg~~LaS~s~Dg-----~V~vWdl~~~~~~~ 881 (894)
-++++++.||.++ .|.+||++..+...
T Consensus 250 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 250 VNGLLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred ECCEEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 3678888888664 48889988776654
No 314
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.71 E-value=0.06 Score=57.53 Aligned_cols=146 Identities=16% Similarity=0.180 Sum_probs=87.9
Q ss_pred CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC---EEEEEE-
Q psy10063 420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT---MFITAS- 495 (894)
Q Consensus 420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~---~L~sgs- 495 (894)
...+++.....+-|.|||+ .|+.++.+.. + .+..|.+-| .+.+ .|+ ++++..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g-~~nnVD~r~------------------~~~l--~g~~~dla~as~R 94 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--G-KLNNVDIRY------------------DFPL--NGKKVDIAAASNR 94 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--S-CEEEEEEEE------------------EEEE--TTEEEEEEEEEEC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--C-CcccEEEec------------------cccc--CCceEeEEEEeCC
Confidence 3445665566778999999 7999988864 2 455555433 1111 222 222233
Q ss_pred C--CCCEEEEEcC--CCcEEEEEe-------CC-CCeeEEEE--cCC-CC-EEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063 496 K--DHTAKLFTTH--DRQLLKTYT-------TE-RPVNSAAL--SPI-LP-HVVLGGGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 496 ~--Dg~V~iwdl~--~~~~~~~~~-------~~-~~v~~l~~--spd-g~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
. +..|+||++. .++ +..+. .. ..++.+|+ ++. ++ ++++...++.+..| ++.+
T Consensus 95 ~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~-----------~l~~ 162 (355)
T 3amr_A 95 SEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQY-----------ELKA 162 (355)
T ss_dssp STTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEE-----------EEEE
T ss_pred CCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEE-----------EEEe
Confidence 3 4789999773 343 44442 22 56777888 774 44 56666666653332 2222
Q ss_pred c----cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063 560 L----IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTL 602 (894)
Q Consensus 560 ~----~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl 602 (894)
. ...+.++.|.. .+.+..|+..+...+|+.+-++..|..++.
T Consensus 163 ~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da 208 (355)
T 3amr_A 163 DKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSA 208 (355)
T ss_dssp CTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEEC
T ss_pred CCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeC
Confidence 1 23456666654 357889999988889999999866555554
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.70 E-value=0.15 Score=55.00 Aligned_cols=104 Identities=11% Similarity=0.059 Sum_probs=61.8
Q ss_pred cceEEEEEecCCCEEEEEEC---C------------CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063 477 EPINDMQFSKDATMFITASK---D------------HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAR 541 (894)
Q Consensus 477 ~~V~~l~~spdg~~L~sgs~---D------------g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~ 541 (894)
.....+++.++|.+.++... | ..=+||.+..+++......-.....|+|+||++.|+++......
T Consensus 165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~ 244 (355)
T 3sre_A 165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHK 244 (355)
T ss_dssp SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCe
Confidence 56788899999887776531 1 12344444444444334444667899999999999988765432
Q ss_pred EEEeccCccceeeEEEEeccc-cce--EEEccCCCCCeEEEEEec-CCCEEEEEeCC
Q psy10063 542 EVTTTSTKVGKFDARFYHLIF-EEE--FARIKGHFGPINSLAFHP-DGKSYASGGED 594 (894)
Q Consensus 542 ~v~~~~~~~~~~~v~vwd~~~-~~~--~~~l~~h~~~V~~l~~sp-dg~~l~sgs~D 594 (894)
|+.|++.. ++. .+.+ ...+..-.+++.+ +|.+.+++..+
T Consensus 245 -------------I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 245 -------------IHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp -------------EEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred -------------EEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 55555542 211 1122 1234566778887 47766655543
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.70 E-value=0.098 Score=54.97 Aligned_cols=74 Identities=11% Similarity=-0.056 Sum_probs=40.5
Q ss_pred cCCCeEEEEecCCCC-ceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCC-----CcEEEEecCccccccc
Q psy10063 809 FDTTREVTTTSTKVG-KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED-----GFVRLHTFDQAYFDYT 882 (894)
Q Consensus 809 ~dg~~l~~as~d~~g-~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~D-----g~V~vWdl~~~~~~~~ 882 (894)
.+++.+++++.+..+ ..+|.+||+++.+-...-..........++.-++++++.||.+ ..|.+||++..+....
T Consensus 205 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 205 LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 355555555444322 2258999998764332211111111112233478888888876 3578888887766544
No 317
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.56 E-value=0.079 Score=57.83 Aligned_cols=145 Identities=17% Similarity=0.168 Sum_probs=92.6
Q ss_pred cCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-----CCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc---------c
Q psy10063 486 KDATMFITASKDHTAKLFTTHDRQLLKTYTTE-----RPVNSAALSPILPHVVLGGGQEAREVTTTSTKV---------G 551 (894)
Q Consensus 486 pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-----~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~---------~ 551 (894)
.+|..|+.+ .++.||.-++..+..-+.+... ..+..+..+|+|++|++.+..+ +.|..+.... .
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~-V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNE-IFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSE-EEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCe-EEEEEecCccccCccccccc
Confidence 355555555 3577887787754445555543 3688899999999999987654 4554444111 1
Q ss_pred eeeEEEEeccccceEEEccCCCCCeEEEEEecC---CCEEEEEeCCCcEEEEECCCCccc----c----------CCCce
Q psy10063 552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPD---GKSYASGGEDGFLISNTLSNGLDI----S----------EGSFT 614 (894)
Q Consensus 552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd---g~~l~sgs~Dg~I~vwdl~~~~~~----~----------~~~~v 614 (894)
...++.|.+...+ ......|..+.|||- |..|++-..|+.||+||+...... . ....+
T Consensus 108 ~~q~~ty~l~~~~-----~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 108 AFQIFHYSIDEEE-----VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp TTEEEEEEGGGCC-------CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCE
T ss_pred ccceeEEEcCCcc-----cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceE
Confidence 2334555544211 114678999999995 558999999999999999863311 0 01456
Q ss_pred eeeEECcCCcEE--Ee--cCCeEEEEe
Q psy10063 615 SSSTQQPDGLVY--PS--QGGHIHSLS 637 (894)
Q Consensus 615 ~~~~~spdg~~l--~~--~~g~i~~~~ 637 (894)
.+++|..+|.-+ .+ .+|.++.+.
T Consensus 183 ~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred EEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 678888877544 33 567777665
No 318
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.54 E-value=0.25 Score=52.18 Aligned_cols=103 Identities=6% Similarity=-0.139 Sum_probs=55.9
Q ss_pred EEecCCCEEEEEE--CCCC--EEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063 483 QFSKDATMFITAS--KDHT--AKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY 558 (894)
Q Consensus 483 ~~spdg~~L~sgs--~Dg~--V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw 558 (894)
.|++++++|+... .++. |+..++......+...+.. ++|+++|+.|+..+.... .|.+.
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~-------------~Iy~~ 172 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNG-------------QLYRY 172 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTC-------------CEEEE
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCc-------------eEEEE
Confidence 5566777777665 3444 4444554333333333322 456888999988776221 15555
Q ss_pred eccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC--cEEEEECCCCc
Q psy10063 559 HLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG--FLISNTLSNGL 606 (894)
Q Consensus 559 d~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg--~I~vwdl~~~~ 606 (894)
++..+.....+.+ .. .+.++|++++|+-...++ .|..-+++...
T Consensus 173 ~l~g~~~~~l~~~---~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 173 DTASQSEALFYDC---NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp ETTTTEEEEEECS---CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred ECCCCCEEEEeCC---Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 5554443332222 22 234668999888776543 45555666544
No 319
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.50 E-value=0.095 Score=57.17 Aligned_cols=169 Identities=9% Similarity=0.004 Sum_probs=90.0
Q ss_pred ccCCCEEEEecCCCcEEEEecCCCeEEEEecCC--CC-CCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEE
Q psy10063 418 GNLDQYIITGHAKGDICTWDLRMGRELESISGH--AK-EPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITA 494 (894)
Q Consensus 418 spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h--~~-~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sg 494 (894)
+.+|..|+.+- ++.||.-++..+...+.++.. -. ..|..+..+|+|.+||..+.. -..|.--|++..+...
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-----~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-----EIFVMEVPWGYSNVED 102 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-----EEEEEECCTTCSCCCC
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-----eEEEEEecCccccCcc
Confidence 34555555553 356776666643333343322 11 146667777777777777653 2223333433322221
Q ss_pred -E--CCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCC---CCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063 495 -S--KDHTAKLFTTHDRQLLKTYTTERPVNSAALSPI---LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR 568 (894)
Q Consensus 495 -s--~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spd---g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~ 568 (894)
+ .--.++-|.+...+ .....+|..+.|+|- |..|++-..++.+++|++......-. ++........
T Consensus 103 ~~~~~~~q~~ty~l~~~~----~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~----~L~k~~~~fg 174 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEE----VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI----VLNKPNNSFG 174 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC------CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE----EESCCCSEEE
T ss_pred cccccccceeEEEcCCcc----cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc----chhccccccC
Confidence 0 00123444443211 113578999999996 46899999999866666554322111 1211111122
Q ss_pred ccCCCCCeEEEEEecCCCEEEEEe--CCCcEEEE
Q psy10063 569 IKGHFGPINSLAFHPDGKSYASGG--EDGFLISN 600 (894)
Q Consensus 569 l~~h~~~V~~l~~spdg~~l~sgs--~Dg~I~vw 600 (894)
+..+...|.+++|..++-.|+..+ +.|.|+-.
T Consensus 175 ~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 175 LDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 334456788999998777666655 66776543
No 320
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.48 E-value=0.1 Score=58.92 Aligned_cols=63 Identities=6% Similarity=-0.010 Sum_probs=43.2
Q ss_pred ceEEEEEecC-CCEEEEEECCCCEEEEEcC-------CCcE-----------E-EEEeC--CCCeeEEEEcCCCCEEEEE
Q psy10063 478 PINDMQFSKD-ATMFITASKDHTAKLFTTH-------DRQL-----------L-KTYTT--ERPVNSAALSPILPHVVLG 535 (894)
Q Consensus 478 ~V~~l~~spd-g~~L~sgs~Dg~V~iwdl~-------~~~~-----------~-~~~~~--~~~v~~l~~spdg~~l~~~ 535 (894)
....++++|+ +.++++-..++.|..+|+. ++.. + ..+.. ......|+|+|+|++|+++
T Consensus 248 ~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYva 327 (496)
T 3kya_A 248 QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFG 327 (496)
T ss_dssp CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEE
Confidence 3457788884 5555555677889999987 5554 2 22332 3557899999999988887
Q ss_pred ECCCC
Q psy10063 536 GGQEA 540 (894)
Q Consensus 536 ~~~~~ 540 (894)
.....
T Consensus 328 D~~~h 332 (496)
T 3kya_A 328 VINNH 332 (496)
T ss_dssp ETTTT
T ss_pred eCCCC
Confidence 76554
No 321
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.47 E-value=0.22 Score=52.37 Aligned_cols=27 Identities=11% Similarity=0.092 Sum_probs=18.8
Q ss_pred CCcEEEEecCC-----CcEEEEecCccccccc
Q psy10063 856 DGKSYASGGED-----GFVRLHTFDQAYFDYT 882 (894)
Q Consensus 856 dg~~LaS~s~D-----g~V~vWdl~~~~~~~~ 882 (894)
++++++.||.+ ..|.+||++..+....
T Consensus 247 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 278 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGRLGHILEYNTETDKWVAN 278 (306)
T ss_dssp TTEEEEEECBCSSSBCCEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeC
Confidence 67778888754 4578888877765543
No 322
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.31 E-value=0.72 Score=49.80 Aligned_cols=92 Identities=9% Similarity=0.033 Sum_probs=48.5
Q ss_pred cceeeeeccCcc-EEEecCCCeEEEEE----------------ecCCCCEEEEEEccC---CCEEEEec-C-------CC
Q psy10063 380 VDRLNSMSPAAR-KLATNAEPVVKMQV----------------TDQSAKITSLLWGNL---DQYIITGH-A-------KG 431 (894)
Q Consensus 380 ~~~~~~~s~dg~-~l~~~~~~~~~~~l----------------~~H~~~V~~l~~spd---g~~L~sgs-~-------Dg 431 (894)
..+.++|.+||+ +++......+.+.- ....+....|+|+|+ +.+|+.+. . ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 345567777777 66655444333211 011245689999996 45554442 2 22
Q ss_pred cEEEEecCCC--e--EEEE-ecCC------CCCCeeEEEEcCCCCEEEEEeC
Q psy10063 432 DICTWDLRMG--R--ELES-ISGH------AKEPINDMQFSKDATMFITASH 472 (894)
Q Consensus 432 ~I~iWd~~tg--~--~~~~-l~~h------~~~~V~~v~~spdg~~la~~~~ 472 (894)
.|..|++..+ + ..+. +... .. ....|+|.|||.++++.+.
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h-~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNH-FGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSC-CCCCEEECSSSEEEEEECC
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcc-cCccEEECCCCcEEEEECC
Confidence 5666766533 1 1121 2111 11 2457999999966665443
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.96 E-value=0.61 Score=49.04 Aligned_cols=71 Identities=15% Similarity=0.097 Sum_probs=39.0
Q ss_pred CCCeEEEEecCCCC-ceeEEEeecCCcceee--eccCCCCCeeEEEEeeCCcEEEEecCCC-----cEEEEecCcccccc
Q psy10063 810 DTTREVTTTSTKVG-KFDARFYHLIFEEEFA--RIKGHFGPINSLAFHPDGKSYASGGEDG-----FVRLHTFDQAYFDY 881 (894)
Q Consensus 810 dg~~l~~as~d~~g-~~~I~vwd~~tg~~l~--~l~gH~~~V~~l~fSpdg~~LaS~s~Dg-----~V~vWdl~~~~~~~ 881 (894)
+++.++.++.+... ..+|.+||+++.+-.. .+....... +++ .-++++++.||.++ .|.+||++..+...
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL-GIT-VHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce-EEE-EECCEEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 55545554443221 1258999998764332 222111111 222 23788888888653 57888888776654
Q ss_pred c
Q psy10063 882 T 882 (894)
Q Consensus 882 ~ 882 (894)
.
T Consensus 293 ~ 293 (308)
T 1zgk_A 293 V 293 (308)
T ss_dssp E
T ss_pred c
Confidence 4
No 324
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.92 E-value=0.11 Score=54.68 Aligned_cols=174 Identities=10% Similarity=0.063 Sum_probs=86.1
Q ss_pred cCCCEEEEecCC-----CcEEEEecCCCe---EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc--cceE--------
Q psy10063 419 NLDQYIITGHAK-----GDICTWDLRMGR---ELESISGHAKEPINDMQFSKDATMFITASHSQAV--EPIN-------- 480 (894)
Q Consensus 419 pdg~~L~sgs~D-----g~I~iWd~~tg~---~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i--~~V~-------- 480 (894)
-++++++.|+.+ ..+.+||+.+.+ ....-..... .-...+..-+++.++.|+.++.. ..+.
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR-RGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC-CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC-ccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 357777788755 368999988765 3322111111 11112222266777777654432 0010
Q ss_pred -------------EEEEecCCCEEEEEECC-----CCEEEEEcCCCcEEEEEeCC-CC-eeEEEEcCCCCEEEEEECCCC
Q psy10063 481 -------------DMQFSKDATMFITASKD-----HTAKLFTTHDRQLLKTYTTE-RP-VNSAALSPILPHVVLGGGQEA 540 (894)
Q Consensus 481 -------------~l~~spdg~~L~sgs~D-----g~V~iwdl~~~~~~~~~~~~-~~-v~~l~~spdg~~l~~~~~~~~ 540 (894)
..+..-++++++.|+.+ ..|.+||+.+.+....-... .. -.+++. -+++.+++|+.++.
T Consensus 140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~ 218 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGT 218 (301)
T ss_dssp EEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSS
T ss_pred EEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCC
Confidence 01111256666776654 45888998877655432221 11 112222 24555566555432
Q ss_pred eEEEeccCccceeeEEEEeccccceEEE--ccCCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEECCCC
Q psy10063 541 REVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHPDGKSYASGGEDG-----FLISNTLSNG 605 (894)
Q Consensus 541 ~~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~Dg-----~I~vwdl~~~ 605 (894)
.. .-++.+||+...+.... +.........+. -++++++.|+.++ .|.+||++..
T Consensus 219 ~~---------~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 219 AH---------LSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp SB---------CCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred cc---------cceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 10 12377788776654432 211111222222 2677777777553 4677777654
No 325
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.83 E-value=0.98 Score=47.77 Aligned_cols=112 Identities=13% Similarity=0.160 Sum_probs=61.6
Q ss_pred CEEEEEE---ccCCCEEEEec-------------CCCcEEEEecC---CCeEEEEecCC------------CCCCeeEEE
Q psy10063 411 KITSLLW---GNLDQYIITGH-------------AKGDICTWDLR---MGRELESISGH------------AKEPINDMQ 459 (894)
Q Consensus 411 ~V~~l~~---spdg~~L~sgs-------------~Dg~I~iWd~~---tg~~~~~l~~h------------~~~~V~~v~ 459 (894)
.+..|.| .|+++++++.. .+..|..||+. +++.+..+... .......|+
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva 143 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA 143 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence 4689999 68887777543 25779999998 77765544311 111244555
Q ss_pred EcCCCCEEEEEeCC-CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECC
Q psy10063 460 FSKDATMFITASHS-QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQ 538 (894)
Q Consensus 460 ~spdg~~la~~~~d-~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~ 538 (894)
+.++|...++++.. +. | +.++|||+. +..|.+.... .........|++.|+|..|++....
T Consensus 144 vD~~GnaYVt~s~~~~~---I--~rV~pdG~~---------~~~~~~~~~~----~~~~~G~nGIv~~pdg~~Liv~~~~ 205 (334)
T 2p9w_A 144 QDRDGNSYVAFALGMPA---I--ARVSADGKT---------VSTFAWESGN----GGQRPGYSGITFDPHSNKLIAFGGP 205 (334)
T ss_dssp ECTTSCEEEEEEESSCE---E--EEECTTSCC---------EEEEEECCCC----SSSCCSCSEEEEETTTTEEEEESSS
T ss_pred ECCCCCEEEeCCCCCCe---E--EEEeCCCCE---------EeeeeecCCC----cccccCcceEEEeCCCCEEEEEcCC
Confidence 55555544444332 11 1 122333321 2233322110 0011346799999999999998876
Q ss_pred CC
Q psy10063 539 EA 540 (894)
Q Consensus 539 ~~ 540 (894)
+.
T Consensus 206 g~ 207 (334)
T 2p9w_A 206 RA 207 (334)
T ss_dssp SS
T ss_pred Ce
Confidence 55
No 326
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.80 E-value=0.34 Score=50.77 Aligned_cols=172 Identities=9% Similarity=0.039 Sum_probs=86.1
Q ss_pred CCCEEEEecCC-----CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc------------------
Q psy10063 420 LDQYIITGHAK-----GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV------------------ 476 (894)
Q Consensus 420 dg~~L~sgs~D-----g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------------------ 476 (894)
++++++.|+.+ ..+.+||+.+.+....-..... .....+..-+++.++.|+.++..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR-RSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc-ccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 67777888755 3588999988765433221111 11112222367777777765432
Q ss_pred ------cceEEEEEecCCCEEEEEECC-------CCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063 477 ------EPINDMQFSKDATMFITASKD-------HTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEAR 541 (894)
Q Consensus 477 ------~~V~~l~~spdg~~L~sgs~D-------g~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~ 541 (894)
+.-.+++. -++++++.|+.+ ..|.+||+.+.+....-.. ...-.+++. -+++.+++|+.++..
T Consensus 140 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~ 217 (302)
T 2xn4_A 140 APMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPL 217 (302)
T ss_dssp CCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSS
T ss_pred CCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCc
Confidence 00011111 245566666542 3588899887765443221 111122222 245666666554321
Q ss_pred EEEeccCccceeeEEEEeccccceEEE--ccCCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEECCCC
Q psy10063 542 EVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHPDGKSYASGGEDG-----FLISNTLSNG 605 (894)
Q Consensus 542 ~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~Dg-----~I~vwdl~~~ 605 (894)
..-++.+||+...+.... +.........+. -++++++.|+.++ .|.+||++..
T Consensus 218 ---------~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 218 ---------VRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp ---------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred ---------ccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 011377788776554332 111111112222 2677777777553 3778887654
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.77 E-value=2.1 Score=44.87 Aligned_cols=44 Identities=11% Similarity=0.088 Sum_probs=26.5
Q ss_pred EEEEECCCCEEEEEcCCCcEEEEEeCC---CCeeEEEEcCCCCEEEEEEC
Q psy10063 491 FITASKDHTAKLFTTHDRQLLKTYTTE---RPVNSAALSPILPHVVLGGG 537 (894)
Q Consensus 491 L~sgs~Dg~V~iwdl~~~~~~~~~~~~---~~v~~l~~spdg~~l~~~~~ 537 (894)
++.|+ ..+.+||..+++... .... .+....+...+++.+++|+.
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~ 54 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGL 54 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEE
T ss_pred EEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCc
Confidence 44444 578999999887543 3321 23334444557777777773
No 328
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.73 E-value=1.6 Score=46.84 Aligned_cols=130 Identities=16% Similarity=0.196 Sum_probs=84.3
Q ss_pred CCCEEEEEEcc--CCC-EEEEe-cC--CCcEEEEecCCC----eEEEEecCCCCCCeeEEEEcCCCCEEEEEeC---C--
Q psy10063 409 SAKITSLLWGN--LDQ-YIITG-HA--KGDICTWDLRMG----RELESISGHAKEPINDMQFSKDATMFITASH---S-- 473 (894)
Q Consensus 409 ~~~V~~l~~sp--dg~-~L~sg-s~--Dg~I~iWd~~tg----~~~~~l~~h~~~~V~~v~~spdg~~la~~~~---d-- 473 (894)
......|.+.+ +|. +|+.+ .. +..|.||+++.+ ..+..+.+..-.....+++.++|.++++... +
T Consensus 111 ~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~ 190 (355)
T 3sre_A 111 SFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPY 190 (355)
T ss_dssp GCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHH
T ss_pred ceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcc
Confidence 35778888776 454 45444 22 467888887653 2345555544446889999999987665431 0
Q ss_pred ------------CCc---------------cceEEEEEecCCCEEEEEE-CCCCEEEEEcCC-CcE--EEEEeCCCCeeE
Q psy10063 474 ------------QAV---------------EPINDMQFSKDATMFITAS-KDHTAKLFTTHD-RQL--LKTYTTERPVNS 522 (894)
Q Consensus 474 ------------~~i---------------~~V~~l~~spdg~~L~sgs-~Dg~V~iwdl~~-~~~--~~~~~~~~~v~~ 522 (894)
+.+ ..-..|+|+||++.|+.+. ..+.|+.|++.. +++ .+.+...+..-.
T Consensus 191 ~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDG 270 (355)
T 3sre_A 191 LKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDN 270 (355)
T ss_dssp HHHHHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEE
T ss_pred cccchhhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCce
Confidence 111 2456789999998877765 568899999863 433 234444566788
Q ss_pred EEEcC-CCCEEEEEECC
Q psy10063 523 AALSP-ILPHVVLGGGQ 538 (894)
Q Consensus 523 l~~sp-dg~~l~~~~~~ 538 (894)
+++.+ +|.+.+++..+
T Consensus 271 i~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 271 ISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEECTTTCCEEEEEESC
T ss_pred EEEeCCCCcEEEEecCC
Confidence 99999 58876655544
No 329
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.64 E-value=2.7 Score=44.19 Aligned_cols=166 Identities=9% Similarity=0.048 Sum_probs=101.2
Q ss_pred EEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063 414 SLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT 493 (894)
Q Consensus 414 ~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s 493 (894)
+...+|..+.||.-. ...|.|||+++.+.++.+.-.+. |..-.|-.+. .|+.
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~--------------------------VvfWkWis~~-~L~l 122 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD--------------------------VTFWKWISLN-TVAL 122 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSC--------------------------EEEEEECSSS-EEEE
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCc--------------------------cEEEEecCCC-eEEE
Confidence 345688888888765 56899999999999988876653 5555565443 3444
Q ss_pred EECCCCEEEEEcCC-CcEEEEEeC-----CCCeeEEEEcCCCCEEEEEEC-------CCCeEEEeccCcccee-------
Q psy10063 494 ASKDHTAKLFTTHD-RQLLKTYTT-----ERPVNSAALSPILPHVVLGGG-------QEAREVTTTSTKVGKF------- 553 (894)
Q Consensus 494 gs~Dg~V~iwdl~~-~~~~~~~~~-----~~~v~~l~~spdg~~l~~~~~-------~~~~~v~~~~~~~~~~------- 553 (894)
.. +..|+-|++.. ..+.+.|.. ...|.....+++.++++..|- .|.+.+|..+.+..+.
T Consensus 123 VT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~ 201 (365)
T 2xzh_A 123 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAS 201 (365)
T ss_dssp EE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEE
T ss_pred Ec-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeee
Confidence 33 45688998874 456666663 245777778888888877653 2344555544332110
Q ss_pred --------------------------eEEEEecccc---c------eEEEcc---CCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063 554 --------------------------DARFYHLIFE---E------EFARIK---GHFGPINSLAFHPDGKSYASGGEDG 595 (894)
Q Consensus 554 --------------------------~v~vwd~~~~---~------~~~~l~---~h~~~V~~l~~spdg~~l~sgs~Dg 595 (894)
.+.+.++... . .+..+. .-.+...++..++.-..|+....-|
T Consensus 202 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G 281 (365)
T 2xzh_A 202 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG 281 (365)
T ss_dssp EEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTS
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCc
Confidence 1222222110 0 000000 0122334566666666788888999
Q ss_pred cEEEEECCCCccc
Q psy10063 596 FLISNTLSNGLDI 608 (894)
Q Consensus 596 ~I~vwdl~~~~~~ 608 (894)
.|++||++++..+
T Consensus 282 ~ihlyDleTgt~i 294 (365)
T 2xzh_A 282 YIHLYDLETGTCI 294 (365)
T ss_dssp EEEEEETTTCCEE
T ss_pred EEEEEEcccCcEE
Confidence 9999999998755
No 330
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.59 E-value=5.6 Score=47.53 Aligned_cols=203 Identities=13% Similarity=0.121 Sum_probs=110.0
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec----CCCCCCeeEEEEcCCCCEEEEEeCCCCc---------
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS----GHAKEPINDMQFSKDATMFITASHSQAV--------- 476 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~----~h~~~~V~~v~~spdg~~la~~~~d~~i--------- 476 (894)
..|.++.. .+| .|..|..+ -|.++|..+++.. .+. +.....|.++....+|.+.+.. ..|-.
T Consensus 103 ~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~Gl~~~~~~~~~~ 177 (758)
T 3ott_A 103 TDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGT-YNGLCRYIPSNGKF 177 (758)
T ss_dssp SCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEE-TTEEEEEETTTTEE
T ss_pred ceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEe-CCCHhhCccCCCce
Confidence 35777754 355 55556555 5888998766543 331 1112267888777777655432 22211
Q ss_pred -------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeE
Q psy10063 477 -------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEARE 542 (894)
Q Consensus 477 -------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~ 542 (894)
..|.+|....++..|..|.. +-|..+|...++...... ....|.++....+|.+.+ |...|
T Consensus 178 ~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~G--- 252 (758)
T 3ott_A 178 EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDNG--- 252 (758)
T ss_dssp EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETTE---
T ss_pred EEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCCc---
Confidence 12677777776665555554 458888987765443221 134578888877776544 44443
Q ss_pred EEeccCccceeeEEEEeccccceEEEcc-------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc-c------
Q psy10063 543 VTTTSTKVGKFDARFYHLIFEEEFARIK-------GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD-I------ 608 (894)
Q Consensus 543 v~~~~~~~~~~~v~vwd~~~~~~~~~l~-------~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~-~------ 608 (894)
+.+++...++...... -....|.+|....+|.+ ..|...| |.++....... .
T Consensus 253 ------------l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-WiGT~~G-l~~~~~~~~~~~~~~~~~~ 318 (758)
T 3ott_A 253 ------------LYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNI-WLGTDYG-ISLSRYNSALQFIPISQIT 318 (758)
T ss_dssp ------------EEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCE-EEEESSS-EEEECCCC-CEEEEHHHHS
T ss_pred ------------eeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCE-EEEeCCc-ccccccCCceeEEecccCC
Confidence 5556555443322111 12346889988877764 4445556 55443322111 0
Q ss_pred --cCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063 609 --SEGSFTSSSTQQPDGLVYPSQGGHIHSL 636 (894)
Q Consensus 609 --~~~~~v~~~~~spdg~~l~~~~g~i~~~ 636 (894)
.....+.++....+|.+.....+-+..+
T Consensus 319 ~~~~~~~v~~i~~D~~g~lWiGt~~Gl~~~ 348 (758)
T 3ott_A 319 GTGDGNQFYSLFRDSKGFYWFGGANGLIRF 348 (758)
T ss_dssp CSCCCCBEEEEEECTTCCEEEEETTEEEEE
T ss_pred CCCCCceEEEEEEcCCCCEEEeeCCcceee
Confidence 1133566677777776654444444444
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.55 E-value=0.2 Score=52.73 Aligned_cols=172 Identities=6% Similarity=0.070 Sum_probs=87.3
Q ss_pred CCCEEEEecCC----CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC-CCc--cce-------------
Q psy10063 420 LDQYIITGHAK----GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHS-QAV--EPI------------- 479 (894)
Q Consensus 420 dg~~L~sgs~D----g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d-~~i--~~V------------- 479 (894)
++++++.|+.+ ..+.+||+.+.+....-..... .....+..-++++++.|+.+ +.. ..+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~ 133 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP-RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK 133 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC-CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc-ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC
Confidence 66777788755 5688999988765433221111 22222222367777777765 211 001
Q ss_pred ---------EEEEEecCCCEEEEEEC---------CCCEEEEEcCCCcEEEEEeCC-CC-eeEEEEcCCCCEEEEEECCC
Q psy10063 480 ---------NDMQFSKDATMFITASK---------DHTAKLFTTHDRQLLKTYTTE-RP-VNSAALSPILPHVVLGGGQE 539 (894)
Q Consensus 480 ---------~~l~~spdg~~L~sgs~---------Dg~V~iwdl~~~~~~~~~~~~-~~-v~~l~~spdg~~l~~~~~~~ 539 (894)
.+++. -++++++.|+. -..+.+||+.+.+....-... .. -.+++.. +++.+++|+.++
T Consensus 134 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~ 211 (306)
T 3ii7_A 134 PSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNG 211 (306)
T ss_dssp CCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEET
T ss_pred CCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCC
Confidence 11111 24556666653 345889999877654432221 11 1222222 555566655433
Q ss_pred CeEEEeccCccceeeEEEEeccccceEEE--ccCCCCCeEEEEEecCCCEEEEEeCC-----CcEEEEECCCC
Q psy10063 540 AREVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHPDGKSYASGGED-----GFLISNTLSNG 605 (894)
Q Consensus 540 ~~~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~D-----g~I~vwdl~~~ 605 (894)
... .-++.+||+...+.... +........++.+ ++++++.|+.+ ..|.+||++..
T Consensus 212 ~~~---------~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 212 LGG---------LDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp TEE---------BCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCC---------CceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 210 11377788776544332 2222222233333 67778888754 34777777654
No 332
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.45 E-value=0.27 Score=55.30 Aligned_cols=74 Identities=9% Similarity=-0.070 Sum_probs=54.6
Q ss_pred cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc------e-------eeeccCCCCCeeEEEEeeCCcEEEEecCC
Q psy10063 800 LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE------E-------FARIKGHFGPINSLAFHPDGKSYASGGED 866 (894)
Q Consensus 800 ~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~------~-------l~~l~gH~~~V~~l~fSpdg~~LaS~s~D 866 (894)
.....+-++|||+++++++.-.. .|.|+|++.-. + +..++... .....+|.++|.-..+.-.|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsp---tvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl-GPlHt~Fd~~G~aYTtlfid 398 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSP---TCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL-GPLHTTFDGRGNAYTTLFID 398 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSS---BEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS-CEEEEEECSSSEEEEEETTT
T ss_pred CCCcceeeCCCCCEEEEcCCCCC---eEEEEEeehhhhhhhccccCcccceEeeccCCC-cccEEEECCCCceEeeeeec
Confidence 34556789999999998877654 69999987421 1 23333333 34589999999777788899
Q ss_pred CcEEEEecCcc
Q psy10063 867 GFVRLHTFDQA 877 (894)
Q Consensus 867 g~V~vWdl~~~ 877 (894)
..|..|+++..
T Consensus 399 SqvvkWni~~a 409 (638)
T 3sbq_A 399 SQVVKWNMEEA 409 (638)
T ss_dssp TEEEEEEHHHH
T ss_pred ceEEEEeccHH
Confidence 99999999765
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.30 E-value=1.4 Score=49.28 Aligned_cols=55 Identities=24% Similarity=0.328 Sum_probs=34.0
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEE--EEecC-----CCCCCeeEEEEcCC
Q psy10063 409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGREL--ESISG-----HAKEPINDMQFSKD 463 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~--~~l~~-----h~~~~V~~v~~spd 463 (894)
-...++|+|.|||+++++-...+.|++++...|+.. ..+.. .....+..|+|+||
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 446679999999987776554457888876655432 22221 01125667777774
No 334
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.25 E-value=2.6 Score=47.13 Aligned_cols=20 Identities=15% Similarity=0.278 Sum_probs=14.6
Q ss_pred ceEEEEEecCCCEEEEEECC
Q psy10063 478 PINDMQFSKDATMFITASKD 497 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~D 497 (894)
....|+|.|||.+.++.+..
T Consensus 140 ~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 140 LGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CEEEEEECTTSCEEEEECCT
T ss_pred cCCcEeECCCCcEEEEeCCC
Confidence 45678899999877766543
No 335
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.23 E-value=4.5 Score=44.24 Aligned_cols=128 Identities=10% Similarity=0.106 Sum_probs=84.9
Q ss_pred EEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063 414 SLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT 493 (894)
Q Consensus 414 ~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s 493 (894)
+.-.+|..+.||.-. ...|.|||+++.+.++.+.-... |..-.|-.+. .|+.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~--------------------------VvfWkWis~~-~l~l 121 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD--------------------------VTFWKWISLN-TVAL 121 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSC--------------------------CCEEEEEETT-EEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCC--------------------------ceEEEecCCC-eEEE
Confidence 455678888887765 56899999999998888876653 4444554433 3444
Q ss_pred EECCCCEEEEEcCC-CcEEEEEeC-----CCCeeEEEEcCCCCEEEEEEC---CCCeEEEeccCccceeeEEEEeccccc
Q psy10063 494 ASKDHTAKLFTTHD-RQLLKTYTT-----ERPVNSAALSPILPHVVLGGG---QEAREVTTTSTKVGKFDARFYHLIFEE 564 (894)
Q Consensus 494 gs~Dg~V~iwdl~~-~~~~~~~~~-----~~~v~~l~~spdg~~l~~~~~---~~~~~v~~~~~~~~~~~v~vwd~~~~~ 564 (894)
.. +..|+-|++.. ..+++.|.. ...|.....+++.++++..|- ++.+ ...+.+|..+. +
T Consensus 122 VT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v----------~G~mQLYS~er-~ 189 (494)
T 1bpo_A 122 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV----------VGAMQLYSVDR-K 189 (494)
T ss_dssp EC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEE----------EEEEEEEESTT-C
T ss_pred Ec-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcc----------cceEEEeeccc-c
Confidence 43 56799999974 456677764 346788888999999887663 2211 11277887774 3
Q ss_pred eEEEccCCCCCeEEEEE
Q psy10063 565 EFARIKGHFGPINSLAF 581 (894)
Q Consensus 565 ~~~~l~~h~~~V~~l~~ 581 (894)
.-+.+.||.+....+.+
T Consensus 190 ~sQ~ieGhaa~F~~~~~ 206 (494)
T 1bpo_A 190 VSQPIEGHAASFAQFKM 206 (494)
T ss_dssp CEEEECCSEEEEEEEEC
T ss_pred ccchheeeeeeeEEEec
Confidence 44567788665544443
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.94 E-value=0.31 Score=48.26 Aligned_cols=140 Identities=12% Similarity=0.005 Sum_probs=80.2
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE------EEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCc
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQL------LKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTK 549 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~------~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~ 549 (894)
.+.+|+|+|+|.+.++ .+|.|+-.+..+.+. -..+.. -....++.|.++|.+.++ .++.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~--------- 108 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDK--------- 108 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTE---------
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCE---------
Confidence 6789999999986666 667665555544211 122221 123589999999988777 4464
Q ss_pred cceeeEEEEeccccc-------eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc---------ccc--CC
Q psy10063 550 VGKFDARFYHLIFEE-------EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL---------DIS--EG 611 (894)
Q Consensus 550 ~~~~~v~vwd~~~~~-------~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~---------~~~--~~ 611 (894)
|..++-.+.. ....-.+--..+..|.|.|+|.+.+.. |+.++-+...... .+. .-
T Consensus 109 -----iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~ 181 (236)
T 1tl2_A 109 -----LYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGW 181 (236)
T ss_dssp -----EEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSG
T ss_pred -----EEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCc
Confidence 3333321110 011111122467899999999865555 7776544332111 111 11
Q ss_pred CceeeeEECcCCcEEEecCCeEEEEe
Q psy10063 612 SFTSSSTQQPDGLVYPSQGGHIHSLS 637 (894)
Q Consensus 612 ~~v~~~~~spdg~~l~~~~g~i~~~~ 637 (894)
.....+.|.++|.++...+|++....
T Consensus 182 ~~yr~l~f~~~G~l~~v~~g~~Y~~~ 207 (236)
T 1tl2_A 182 DTFKFLFFSSVGTLFGVQGGKFYEDY 207 (236)
T ss_dssp GGEEEEEECTTSCEEEEETTEEEEES
T ss_pred ceEEEEEECCCCcEEEEeCCeEEecC
Confidence 23445678999988866677766664
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.85 E-value=1.6 Score=46.82 Aligned_cols=58 Identities=9% Similarity=-0.079 Sum_probs=31.0
Q ss_pred eEEEeecCCcc--eeeeccCCCCCeeEEEEeeCCcEEEEecCCC------cEEEEecCcccccccccc
Q psy10063 826 DARFYHLIFEE--EFARIKGHFGPINSLAFHPDGKSYASGGEDG------FVRLHTFDQAYFDYTFDI 885 (894)
Q Consensus 826 ~I~vwd~~tg~--~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg------~V~vWdl~~~~~~~~~~~ 885 (894)
.+.+||+++.+ .+..+...... ..++..++++++.||.++ .|.+++++.++++....+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred eEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 47888887653 33333222222 223445789999998654 355568888777665443
No 338
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.72 E-value=0.85 Score=45.13 Aligned_cols=81 Identities=5% Similarity=0.007 Sum_probs=54.9
Q ss_pred CeeEEEEcCCCCEEEEEeCCCCc-----------------cce--------EEEEEecCCCEEEEEECCCCEEEEEcCCC
Q psy10063 454 PINDMQFSKDATMFITASHSQAV-----------------EPI--------NDMQFSKDATMFITASKDHTAKLFTTHDR 508 (894)
Q Consensus 454 ~V~~v~~spdg~~la~~~~d~~i-----------------~~V--------~~l~~spdg~~L~sgs~Dg~V~iwdl~~~ 508 (894)
.+.+++|+|+|.+.++ .++.+ ..| .++.|.++|.+.++ .||.|+-|+-.+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 6789999999987776 44433 233 78889999987777 5688877765321
Q ss_pred cEE------EEE-eCC-CCeeEEEEcCCCCEEEEEECCCC
Q psy10063 509 QLL------KTY-TTE-RPVNSAALSPILPHVVLGGGQEA 540 (894)
Q Consensus 509 ~~~------~~~-~~~-~~v~~l~~spdg~~l~~~~~~~~ 540 (894)
..- ..+ .+. ..+.+|.|.|+|.+.++. ++.
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ 155 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ 155 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence 110 111 112 568999999999877777 554
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.32 E-value=6 Score=41.38 Aligned_cols=72 Identities=14% Similarity=0.008 Sum_probs=39.6
Q ss_pred cCCCeEEEEecCCCCc-eeEEEeecCCccee--eeccCCCCCeeEEEEeeCCcEEEEecCCC--------------cEEE
Q psy10063 809 FDTTREVTTTSTKVGK-FDARFYHLIFEEEF--ARIKGHFGPINSLAFHPDGKSYASGGEDG--------------FVRL 871 (894)
Q Consensus 809 ~dg~~l~~as~d~~g~-~~I~vwd~~tg~~l--~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg--------------~V~v 871 (894)
.+++.++.++.+..+. ..|.+||+++.+-. ..+....... .+..-++++++.||.++ .|.+
T Consensus 205 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~--~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~ 282 (318)
T 2woz_A 205 HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI--SLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWK 282 (318)
T ss_dssp ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC--EEEEETTEEEEECCBCCBC----CCBCCBCCCEEE
T ss_pred ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce--EEEEECCEEEEECCeeccCCCCceeccceeeeEEE
Confidence 4555555555443221 24889998876432 2222111111 22234678888887653 4778
Q ss_pred EecCccccccc
Q psy10063 872 HTFDQAYFDYT 882 (894)
Q Consensus 872 Wdl~~~~~~~~ 882 (894)
||++..+....
T Consensus 283 yd~~~~~W~~~ 293 (318)
T 2woz_A 283 YEDDKKEWAGM 293 (318)
T ss_dssp EETTTTEEEEE
T ss_pred EeCCCCEehhh
Confidence 88887766544
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.25 E-value=1.3 Score=46.57 Aligned_cols=96 Identities=11% Similarity=0.093 Sum_probs=48.6
Q ss_pred CCCEEEEEEC-C-----CCEEEEEcCCCcEEEEEeCC-CC-eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063 487 DATMFITASK-D-----HTAKLFTTHDRQLLKTYTTE-RP-VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY 558 (894)
Q Consensus 487 dg~~L~sgs~-D-----g~V~iwdl~~~~~~~~~~~~-~~-v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw 558 (894)
++++++.|+. + ..|.+||+.+.+....-... .. -.+++. -+++.+++|+.++... .-++.+|
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~---------~~~~~~y 217 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGL---------TSSAEVY 217 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSE---------EEEEEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCc---------cceEEEE
Confidence 4566667765 2 46889998877544322211 11 122222 2566677776554311 1137778
Q ss_pred eccccceEEEc--cCCCCCeEEEEEecCCCEEEEEeCC
Q psy10063 559 HLIFEEEFARI--KGHFGPINSLAFHPDGKSYASGGED 594 (894)
Q Consensus 559 d~~~~~~~~~l--~~h~~~V~~l~~spdg~~l~sgs~D 594 (894)
|+.+.+....- .........+.+ ++++++.|+.+
T Consensus 218 d~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 218 SITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEE
T ss_pred ECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCcc
Confidence 87766544322 111112222222 66777777753
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.24 E-value=1.9 Score=45.37 Aligned_cols=168 Identities=13% Similarity=0.108 Sum_probs=79.4
Q ss_pred EEEEccCCCEEEEecC----CC-------cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC---Cc-cc
Q psy10063 414 SLLWGNLDQYIITGHA----KG-------DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQ---AV-EP 478 (894)
Q Consensus 414 ~l~~spdg~~L~sgs~----Dg-------~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~---~i-~~ 478 (894)
+.+...++++++.|+. ++ .+.+||+.+.+....-.......-.+++. -+++.++.|+.+. .. ..
T Consensus 50 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 128 (318)
T 2woz_A 50 SSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDS 128 (318)
T ss_dssp EEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEE
T ss_pred eEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEE-ECCEEEEEcCccCCCCcccce
Confidence 3344557788888873 12 17788888776543211111101112222 2667777777541 11 00
Q ss_pred eE---------------------EEEEecCCCEEEEEEC------CCCEEEEEcCCCcEEEEEeCC--CCeeEEEEcCCC
Q psy10063 479 IN---------------------DMQFSKDATMFITASK------DHTAKLFTTHDRQLLKTYTTE--RPVNSAALSPIL 529 (894)
Q Consensus 479 V~---------------------~l~~spdg~~L~sgs~------Dg~V~iwdl~~~~~~~~~~~~--~~v~~l~~spdg 529 (894)
+. ..+..-++++++.|+. -..|.+||+.+.+....-... ....+++. -++
T Consensus 129 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~ 207 (318)
T 2woz_A 129 VLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKG 207 (318)
T ss_dssp EEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT
T ss_pred EEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECC
Confidence 00 0111135566666653 235889999887654432221 11122222 256
Q ss_pred CEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE--ccCCCCCeEEEEEecCCCEEEEEeCC
Q psy10063 530 PHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHPDGKSYASGGED 594 (894)
Q Consensus 530 ~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~D 594 (894)
+.+++|+.++... .-++.+||+.+.+.... +.........+. -++++++.|+.+
T Consensus 208 ~iyv~GG~~~~~~---------~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~ 263 (318)
T 2woz_A 208 KIVIAGGVTEDGL---------SASVEAFDLKTNKWEVMTEFPQERSSISLVS--LAGSLYAIGGFA 263 (318)
T ss_dssp EEEEEEEEETTEE---------EEEEEEEETTTCCEEECCCCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred EEEEEcCcCCCCc---------cceEEEEECCCCeEEECCCCCCcccceEEEE--ECCEEEEECCee
Confidence 6666666544311 12377788776654332 211111112222 356777777654
No 342
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.23 E-value=8.6 Score=42.86 Aligned_cols=65 Identities=9% Similarity=0.159 Sum_probs=37.6
Q ss_pred CCCEEEEEEccC----CCEEEEecC--C----------CcEEEEecCC----------CeEEEEec--CCCCCCeeEEEE
Q psy10063 409 SAKITSLLWGNL----DQYIITGHA--K----------GDICTWDLRM----------GRELESIS--GHAKEPINDMQF 460 (894)
Q Consensus 409 ~~~V~~l~~spd----g~~L~sgs~--D----------g~I~iWd~~t----------g~~~~~l~--~h~~~~V~~v~~ 460 (894)
.+....|+|+|+ +.+.++-+. + ..|.-|.+.. .+.+..+. .... ....|+|
T Consensus 68 e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H-~g~~l~f 146 (463)
T 2wg3_C 68 ERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKH-LGGQLLF 146 (463)
T ss_dssp CCSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS-CEEEEEE
T ss_pred CCcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcc-cCCcEeE
Confidence 356788999996 443333221 1 1344466542 23343333 1112 5689999
Q ss_pred cCCCCEEEEEeCCC
Q psy10063 461 SKDATMFITASHSQ 474 (894)
Q Consensus 461 spdg~~la~~~~d~ 474 (894)
.|||.++++.+..+
T Consensus 147 gpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 147 GPDGFLYIILGDGM 160 (463)
T ss_dssp CTTSCEEEEECCTT
T ss_pred CCCCcEEEEeCCCC
Confidence 99998888777644
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.06 E-value=0.2 Score=53.65 Aligned_cols=145 Identities=14% Similarity=0.091 Sum_probs=79.8
Q ss_pred CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEE-ECCCCE
Q psy10063 422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITA-SKDHTA 500 (894)
Q Consensus 422 ~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sg-s~Dg~V 500 (894)
.+|+.++.||.|.-+|..+|+.+-+++.....++... ... .+ ..++..++.. ..||.|
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~---~~~-------------~~-----~~~~~~~vv~p~~dG~l 69 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEI---QEP-------------SR-----LETYETLIIEPFGDGNI 69 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEEC---CCS-------------CT-----TTSSEEEEECCSTTTEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEe---cCC-------------cc-----ccCCcEEEEEECCCCEE
Confidence 4789999999999999999999988875410011110 000 00 0123333333 579999
Q ss_pred EEEEcCCCcEEEEEeCCCCee--EEEEc-----------CCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEE
Q psy10063 501 KLFTTHDRQLLKTYTTERPVN--SAALS-----------PILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA 567 (894)
Q Consensus 501 ~iwdl~~~~~~~~~~~~~~v~--~l~~s-----------pdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~ 567 (894)
..++..+|.....+.....+. -+... -.+..+++++.++. +...|+++|+.+.
T Consensus 70 ~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~--------------l~ald~~tG~~~W 135 (339)
T 2be1_A 70 YYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTI--------------MYTINMLNGEIIS 135 (339)
T ss_dssp EEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEE--------------EEEEETTTCCEEE
T ss_pred EEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCE--------------EEEEECCCCcEEE
Confidence 999998886655554221110 01111 13556777777775 6677777787777
Q ss_pred EccCCC--C-----CeEEEEEe-----cCCCEEEEEeCCCcEEEEE
Q psy10063 568 RIKGHF--G-----PINSLAFH-----PDGKSYASGGEDGFLISNT 601 (894)
Q Consensus 568 ~l~~h~--~-----~V~~l~~s-----pdg~~l~sgs~Dg~I~vwd 601 (894)
.+.... + ...|.... ..+..|+.+..+..|.+.+
T Consensus 136 ~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 136 AFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS 181 (339)
T ss_dssp EESTTCBCC--------------------CCEEEEEEEEEECEECC
T ss_pred EEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC
Confidence 664321 1 01111111 1234677776666666655
No 344
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=93.83 E-value=3.3 Score=43.65 Aligned_cols=111 Identities=11% Similarity=0.023 Sum_probs=63.6
Q ss_pred CCCEEEEEECCCCEEEEEcCCC-------cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063 487 DATMFITASKDHTAKLFTTHDR-------QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 487 dg~~L~sgs~Dg~V~iwdl~~~-------~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
+..+|+..+..|.++...+... .....+...+.+..+.....+..|++.+..|....+..+. |+...
T Consensus 113 ~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~e------v~~~g 186 (312)
T 1suu_A 113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRD------VRLTN 186 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGG------SCBCC
T ss_pred CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHH------ccccC
Confidence 4667888899999999887532 2222233356677766666667788888888643332221 11100
Q ss_pred c-cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063 560 L-IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 560 ~-~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~ 604 (894)
- ..|.....+.. ...|.++....++..|+..+..|.++...++.
T Consensus 187 R~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 187 RGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp TTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 0 11222222322 34455655555566777788888888877754
No 345
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.57 E-value=0.6 Score=49.07 Aligned_cols=172 Identities=9% Similarity=0.009 Sum_probs=84.2
Q ss_pred CCCEEEEecC----C-----CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc--------------
Q psy10063 420 LDQYIITGHA----K-----GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-------------- 476 (894)
Q Consensus 420 dg~~L~sgs~----D-----g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------------- 476 (894)
++++++.|+. + ..+.+||+.+.+....-..... .....+..-+++.++.|+.++..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP-RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC-CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC-ccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 6677777775 2 3688999887764332111111 11111222266777776644321
Q ss_pred ----------cceEEEEEecCCCEEEEEECC-----CCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCC
Q psy10063 477 ----------EPINDMQFSKDATMFITASKD-----HTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQE 539 (894)
Q Consensus 477 ----------~~V~~l~~spdg~~L~sgs~D-----g~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~ 539 (894)
+.-.+++.. ++++++.|+.+ ..|.+||+.+.+....-.. ...-.+++.. +++.+++|+.++
T Consensus 149 W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~ 226 (308)
T 1zgk_A 149 WHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDG 226 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCS
T ss_pred EeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCC
Confidence 001111111 56666776654 4588899887654433221 1111222222 555666665543
Q ss_pred CeEEEeccCccceeeEEEEeccccceEEE--ccCCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEECCCC
Q psy10063 540 AREVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHPDGKSYASGGEDG-----FLISNTLSNG 605 (894)
Q Consensus 540 ~~~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~Dg-----~I~vwdl~~~ 605 (894)
.. ...++.+||+...+.... +.........+. -++++++.|+.++ .|.+||++..
T Consensus 227 ~~---------~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 227 QD---------QLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp SS---------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CC---------ccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 21 112377888776654332 111111222222 2677777776543 4667776554
No 346
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=93.45 E-value=9.9 Score=40.93 Aligned_cols=58 Identities=14% Similarity=0.051 Sum_probs=38.1
Q ss_pred CCCEEEEEECCCCEEEEEcCCC-------cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEE
Q psy10063 487 DATMFITASKDHTAKLFTTHDR-------QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVT 544 (894)
Q Consensus 487 dg~~L~sgs~Dg~V~iwdl~~~-------~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~ 544 (894)
+..+|+.++..|.++...+... .....+...+.+..+........|++.+..|....+
T Consensus 112 ~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~i~l~T~~G~~irf 176 (370)
T 3l6v_A 112 DNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRF 176 (370)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCEEEEEETTSEEEEE
T ss_pred CCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCceEEEEeCCCeEEEE
Confidence 4568999999999999886432 222223334566666666666778888888765443
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.77 E-value=3.6 Score=48.71 Aligned_cols=180 Identities=9% Similarity=0.068 Sum_probs=93.9
Q ss_pred cCCCEEEEecCC----CcEEEEecCCCeEEEEe-c-----CCCCCCeeEEEEcC-CCCEEEEEeCCCCc-----------
Q psy10063 419 NLDQYIITGHAK----GDICTWDLRMGRELESI-S-----GHAKEPINDMQFSK-DATMFITASHSQAV----------- 476 (894)
Q Consensus 419 pdg~~L~sgs~D----g~I~iWd~~tg~~~~~l-~-----~h~~~~V~~v~~sp-dg~~la~~~~d~~i----------- 476 (894)
-++++++.||.+ ..+.+||+.+++....- . ......-.+++... +++.++.|+.++..
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 466777777753 35889998887654433 1 11110112333333 77788888765421
Q ss_pred --------------cceEEEEEecCCCEEEEEECCC--CEEEEEcCCCcEEEEEe---C---CCCeeEEEEcCC-CCEEE
Q psy10063 477 --------------EPINDMQFSKDATMFITASKDH--TAKLFTTHDRQLLKTYT---T---ERPVNSAALSPI-LPHVV 533 (894)
Q Consensus 477 --------------~~V~~l~~spdg~~L~sgs~Dg--~V~iwdl~~~~~~~~~~---~---~~~v~~l~~spd-g~~l~ 533 (894)
+.-.+++...++++++.|+.++ .+.+||+.+.+....-. . .....++.+..+ ++.++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 1111222224778888887654 68999998876544321 1 122334566655 55555
Q ss_pred EEECCCCeEEEeccCccceeeEEEEeccccc------eE--EEcc-CCCCCeEEEEEecCCCEEEEEeCC--------Cc
Q psy10063 534 LGGGQEAREVTTTSTKVGKFDARFYHLIFEE------EF--ARIK-GHFGPINSLAFHPDGKSYASGGED--------GF 596 (894)
Q Consensus 534 ~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~------~~--~~l~-~h~~~V~~l~~spdg~~l~sgs~D--------g~ 596 (894)
+||..... ....-++.+||+...+ .. .... ..... .+++...++++++.|+.+ ..
T Consensus 556 ~GG~~~~~-------~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 627 (695)
T 2zwa_A 556 LGGGFMDQ-------TTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYG-SQIKYITPRKLLIVGGTSPSGLFDRTNS 627 (695)
T ss_dssp ECCBCTTS-------SCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBS-CEEEEEETTEEEEECCBCSSCCCCTTTS
T ss_pred ECCcCCCC-------CeeeCcEEEEEccCCccccceEEEEcCCCCCCCccc-ceEEEeCCCEEEEECCccCCCCCCCCCe
Confidence 55542210 0011236677776655 11 1111 11111 123333347777777743 45
Q ss_pred EEEEECCCCc
Q psy10063 597 LISNTLSNGL 606 (894)
Q Consensus 597 I~vwdl~~~~ 606 (894)
|.+||+....
T Consensus 628 v~~yd~~t~~ 637 (695)
T 2zwa_A 628 IISLDPLSET 637 (695)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCe
Confidence 8888887654
No 348
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=92.39 E-value=12 Score=39.12 Aligned_cols=111 Identities=11% Similarity=0.031 Sum_probs=64.1
Q ss_pred CCCEEEEEECCCCEEEEEcCCC-------cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063 487 DATMFITASKDHTAKLFTTHDR-------QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 487 dg~~L~sgs~Dg~V~iwdl~~~-------~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
++.+|+..+..|.++...+... .....+..++.+..+........|+..+..|....+.... |+...
T Consensus 108 ~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~------v~~~g 181 (307)
T 1zi0_A 108 EGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESS------VRAMG 181 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGG------SCBCC
T ss_pred CCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEEEEECCCCcEEEEEHHH------cCccC
Confidence 4667889999999999977522 1112223346666666666666788888887643322210 11110
Q ss_pred c-cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063 560 L-IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 560 ~-~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~ 604 (894)
. ..|.....|. ....|.++....++..|+..+..|.++..+++.
T Consensus 182 r~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e 226 (307)
T 1zi0_A 182 CNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAE 226 (307)
T ss_dssp TTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGG
T ss_pred CCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHH
Confidence 0 0111111222 234566665555566788889999999887744
No 349
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.09 E-value=7 Score=49.19 Aligned_cols=92 Identities=12% Similarity=0.061 Sum_probs=56.9
Q ss_pred EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-
Q psy10063 484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF- 562 (894)
Q Consensus 484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~- 562 (894)
.+|..+.||.-. ...|+|||++..+.++.+....+|.--.|-.+. .|+..+... |..|++..
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~-~l~lVT~~a---------------VyHW~~~~~ 135 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVTDNA---------------VYHWSMEGE 135 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCC-eeEEEcCCe---------------EEEeccCCC
Confidence 345555555443 678999999999999888888888888886543 444444443 66777653
Q ss_pred cceEEEccCC----CCCeEEEEEecCCCEEEEEe
Q psy10063 563 EEEFARIKGH----FGPINSLAFHPDGKSYASGG 592 (894)
Q Consensus 563 ~~~~~~l~~h----~~~V~~l~~spdg~~l~sgs 592 (894)
..+++.+..| ...|..-..+++.+|++..|
T Consensus 136 s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 136 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (1630)
T ss_pred CccHHHHhcchhcccCeeEEeeeCCCCCeEEEEe
Confidence 2233333333 23455555666777665443
No 350
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=91.94 E-value=5.3 Score=42.29 Aligned_cols=114 Identities=7% Similarity=0.030 Sum_probs=64.5
Q ss_pred CCCEEEEEEcc---CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063 409 SAKITSLLWGN---LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS 485 (894)
Q Consensus 409 ~~~V~~l~~sp---dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s 485 (894)
...|.++..-+ +..+|+.++.+|.|+...+..-+... .. .+..+.+..+. .+..+...
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~-----r~-G~~~i~lke~D-------------~lv~~~~~ 154 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNR-----SG-GIVAVNLRDND-------------ELVGAVLC 154 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCC-----SS-CEESCBCCTTC-------------CEEEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccc-----cC-ceEEEEECCCC-------------EEEEEEEe
Confidence 34555554433 57799999999999988875422111 01 23333332222 23333333
Q ss_pred cCCCEEEEEECCCCEEEEEcC--C---------CcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063 486 KDATMFITASKDHTAKLFTTH--D---------RQLLKTYTTERPVNSAALSPILPHVVLGGGQEAR 541 (894)
Q Consensus 486 pdg~~L~sgs~Dg~V~iwdl~--~---------~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~ 541 (894)
.....|+..+..|.+..+.+. . |..+..+..++.|.++....++.+|++.+..|.+
T Consensus 155 ~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~ 221 (327)
T 3uc1_A 155 SAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYA 221 (327)
T ss_dssp CTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEE
T ss_pred cCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcE
Confidence 344556666777777666655 2 1111223335667777777777788888888864
No 351
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=90.94 E-value=16 Score=37.56 Aligned_cols=185 Identities=9% Similarity=0.013 Sum_probs=91.4
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEE---EecCCCeEEEEecCCCCCCeeEEEEcC-CCCEEEEEeCCCCc---------
Q psy10063 410 AKITSLLWGNLDQYIITGHAKGDICT---WDLRMGRELESISGHAKEPINDMQFSK-DATMFITASHSQAV--------- 476 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~Dg~I~i---Wd~~tg~~~~~l~~h~~~~V~~v~~sp-dg~~la~~~~d~~i--------- 476 (894)
+.|.++......++|+.-...|.++- |++..++... + -..+..|..+.... +..+++.++..|.+
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~ 101 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-KSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE 101 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-C-SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-c-CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence 44555554444445555555665543 3443332211 2 22222566554421 45677777776655
Q ss_pred --------------cceEEEEEecCCCEEEEEECCCCEEEEEcCC---------CcEEEEEeCCCCeeEEEEcCCCCEEE
Q psy10063 477 --------------EPINDMQFSKDATMFITASKDHTAKLFTTHD---------RQLLKTYTTERPVNSAALSPILPHVV 533 (894)
Q Consensus 477 --------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~---------~~~~~~~~~~~~v~~l~~spdg~~l~ 533 (894)
..+..+........|+..+..|.+..+.+.. |.....+..++.|.++....++.+|+
T Consensus 102 ~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll 181 (276)
T 3no0_A 102 YKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLL 181 (276)
T ss_dssp TCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEE
T ss_pred hhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEE
Confidence 1333333344445677778888887776532 21222233346677766666677888
Q ss_pred EEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEE--EECCC
Q psy10063 534 LGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLIS--NTLSN 604 (894)
Q Consensus 534 ~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~v--wdl~~ 604 (894)
+.+..|......++. ++.. -+.++-+..+ ...+.+..+....+...|+..+.+|.+.. ++++.
T Consensus 182 ~~T~~G~~kr~~~~e------~~~~-~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 182 VITAKGRVKKISHEE------IPKT-NRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEETTSCEEEEEGGG------SCCC-CTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEeCCCcEEEeEHHH------cccC-CCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 888888643322110 0000 0111122222 22334444433333445666677777766 66543
No 352
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=90.68 E-value=13 Score=39.29 Aligned_cols=107 Identities=13% Similarity=0.057 Sum_probs=67.9
Q ss_pred CCCEEEEEECCCCEEEEEcCCCc-------EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE-
Q psy10063 487 DATMFITASKDHTAKLFTTHDRQ-------LLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY- 558 (894)
Q Consensus 487 dg~~L~sgs~Dg~V~iwdl~~~~-------~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw- 558 (894)
+..+|+..+.+|.|+...+...+ ....++.++.+..+........|++.+..|.+.. +.++
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~r-----------f~~~~ 176 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIR-----------FSATD 176 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEE-----------EECCT
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEE-----------EECcc
Confidence 57789999999999998875422 2222334566777766666778888888886433 2223
Q ss_pred -ecc------ccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063 559 -HLI------FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 559 -d~~------~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~ 605 (894)
++. .|..+..|. ....|.++....++.+|+..+..|.++.-.+...
T Consensus 177 ~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~ 229 (327)
T 3uc1_A 177 EALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEY 229 (327)
T ss_dssp TTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGS
T ss_pred cccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHc
Confidence 222 111111222 2345677666666778899999999988877544
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.32 E-value=3.7 Score=50.48 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=35.1
Q ss_pred cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe
Q psy10063 477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT 515 (894)
Q Consensus 477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~ 515 (894)
..|.+++..++..+|++-+.|+.+|||++.+++++....
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 467888888889999999999999999999999998875
No 354
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=88.78 E-value=8 Score=40.84 Aligned_cols=110 Identities=12% Similarity=0.022 Sum_probs=58.2
Q ss_pred CCEEEEEECCCCEEEEEcCCC------cEEE--EEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063 488 ATMFITASKDHTAKLFTTHDR------QLLK--TYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH 559 (894)
Q Consensus 488 g~~L~sgs~Dg~V~iwdl~~~------~~~~--~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd 559 (894)
+.+|+.++..|.++...+... +-+. .+..++.+..+........|+..+..|....+..+. |+...
T Consensus 106 ~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~e------v~~~g 179 (323)
T 1wp5_A 106 NGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWFDESE------VSIVG 179 (323)
T ss_dssp SCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEEEGGG------SCBCC
T ss_pred CceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHH------CcccC
Confidence 567899999999999987422 1222 233346666666666667788888888643322210 11110
Q ss_pred c-cccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCC
Q psy10063 560 L-IFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSN 604 (894)
Q Consensus 560 ~-~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~ 604 (894)
. ..|.....|. ....|.++....++. .|+..+..|..+..+++.
T Consensus 180 R~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 180 VRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp SSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred CCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 0 0111111121 223455554433344 566667777766665543
No 355
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=88.73 E-value=5.4 Score=42.49 Aligned_cols=52 Identities=12% Similarity=-0.107 Sum_probs=25.6
Q ss_pred eEEEEeccccce--EEEccCCCCCeEEEEEecCCCEEEEEeCCC------cEEEEECCCCcc
Q psy10063 554 DARFYHLIFEEE--FARIKGHFGPINSLAFHPDGKSYASGGEDG------FLISNTLSNGLD 607 (894)
Q Consensus 554 ~v~vwd~~~~~~--~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg------~I~vwdl~~~~~ 607 (894)
++.+||+...+. +..+........++ .-++++++.|+.++ .|.+++++.++.
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLIIGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence 466777765543 33333222222222 34778888888653 255557766653
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.11 E-value=30 Score=42.40 Aligned_cols=81 Identities=11% Similarity=-0.092 Sum_probs=52.0
Q ss_pred CCCEEEEEECCCCeEEEeccCccceeeEEEEecccc-ceEEE------ccCC---CCCeEEEEEecCCCEEEEEeCCCcE
Q psy10063 528 ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE-EEFAR------IKGH---FGPINSLAFHPDGKSYASGGEDGFL 597 (894)
Q Consensus 528 dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~-~~~~~------l~~h---~~~V~~l~~spdg~~l~sgs~Dg~I 597 (894)
+...|+++-.||.+.....+...+.|....++-.+. ..++. .+.+ ...+.+++..++..+|++.+.|+.+
T Consensus 180 ~~~~l~Vsl~dGgLlrl~r~~~~~~~~~~~f~~~s~~~sl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lftl~~D~~L 259 (950)
T 4gq2_M 180 STSEICVSFFNGGLTKIILNPKDASHYEQHIDDSSYLFSLKKYLSLQAFKADYRSPNTIISMIFLSTYNVLVMLSLDYKL 259 (950)
T ss_dssp SSSEEEEEETTSCEEEEEEETTTTEEEEEEECCCCCCCBCC-------CCSSCCCTTCEEEEEEETTTTEEEEEETTCEE
T ss_pred cCCeEEEEECCCCEEEEEecCCCCCcceeeecCCcHHHhhhhhcccccCCCCCCCcceEEEEeecCCCcEEEEEECCCEE
Confidence 445777788888776655555555554444443221 11111 1111 2256778888888999999999999
Q ss_pred EEEECCCCccc
Q psy10063 598 ISNTLSNGLDI 608 (894)
Q Consensus 598 ~vwdl~~~~~~ 608 (894)
|||++.+++.+
T Consensus 260 RiWsl~t~~~v 270 (950)
T 4gq2_M 260 KVLDLSTNQCV 270 (950)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCCeE
Confidence 99999988754
No 357
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=85.47 E-value=43 Score=35.94 Aligned_cols=60 Identities=7% Similarity=-0.047 Sum_probs=31.7
Q ss_pred eEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeC--------------CCCeeEEEEcCC-CCEEEEEECCC
Q psy10063 479 INDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTT--------------ERPVNSAALSPI-LPHVVLGGGQE 539 (894)
Q Consensus 479 V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--------------~~~v~~l~~spd-g~~l~~~~~~~ 539 (894)
|.+|.+.| +...|+.+..++.|... ...|+-...+.. ...+.+|++.++ ...|+++...+
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s-~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFES-TDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEE-SSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEE-CCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 56888887 33445555444433332 222333333321 124789999986 35677665443
No 358
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=83.63 E-value=51 Score=35.30 Aligned_cols=109 Identities=10% Similarity=-0.046 Sum_probs=66.7
Q ss_pred ecCCCEEEEEECCCCEEEEEcCC---------CcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063 485 SKDATMFITASKDHTAKLFTTHD---------RQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA 555 (894)
Q Consensus 485 spdg~~L~sgs~Dg~V~iwdl~~---------~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v 555 (894)
-++..++++.+.+|.|+--.+.. |.....++.++.+..+........|++.+..|.+.. +
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~-----------~ 72 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFW-----------L 72 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEE-----------E
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEE-----------E
Confidence 46677888889999988765432 223333445567777777777777887777775422 4
Q ss_pred EEEecccc------ceEE---EccCCCCCeEEEEEec---CCCEEEEEeCCCcEEEEECCCC
Q psy10063 556 RFYHLIFE------EEFA---RIKGHFGPINSLAFHP---DGKSYASGGEDGFLISNTLSNG 605 (894)
Q Consensus 556 ~vwd~~~~------~~~~---~l~~h~~~V~~l~~sp---dg~~l~sgs~Dg~I~vwdl~~~ 605 (894)
++|++... ..+. .|. ....|.++.... ++.+|+.++..|.++...+...
T Consensus 73 ~~~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~ 133 (370)
T 3l6v_A 73 PVHQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEF 133 (370)
T ss_dssp EGGGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGG
T ss_pred EHHHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHh
Confidence 55555432 2111 122 234555554332 4568999999999998887543
No 359
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=83.13 E-value=44 Score=34.16 Aligned_cols=158 Identities=10% Similarity=0.074 Sum_probs=87.5
Q ss_pred cceeeeeccCccEEEecCCC-----eEEEEEecCCCCEEEEEEcc--CCCEEEEecCCCcEEEEecCCCe----EEEEec
Q psy10063 380 VDRLNSMSPAARKLATNAEP-----VVKMQVTDQSAKITSLLWGN--LDQYIITGHAKGDICTWDLRMGR----ELESIS 448 (894)
Q Consensus 380 ~~~~~~~s~dg~~l~~~~~~-----~~~~~l~~H~~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg~----~~~~l~ 448 (894)
.+.++.|+..|+........ ...+ +. ....|.++.. . +..+++..+.+|.|+...+..-. -+..+.
T Consensus 35 ~~~ll~fT~~G~v~~~~~~~lp~~~~~~l-l~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~ 111 (276)
T 3no0_A 35 TEGLFLVSNRGRVYWIAGSQALQGSKVSL-KS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIK 111 (276)
T ss_dssp TSCEEEEETTSEEEEECSHHHHTSEECCC-SS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSC
T ss_pred CCEEEEEcCCCeEEEEEhhhCccCccccc-CC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEe
Confidence 34566677777765432110 0002 33 3566766654 4 56799999999999998875421 112222
Q ss_pred CCCCCCeeEEEEcCCCCEEEEEeCCCCc--------------------------cceEEEEEecCCCEEEEEECCCCEEE
Q psy10063 449 GHAKEPINDMQFSKDATMFITASHSQAV--------------------------EPINDMQFSKDATMFITASKDHTAKL 502 (894)
Q Consensus 449 ~h~~~~V~~v~~spdg~~la~~~~d~~i--------------------------~~V~~l~~spdg~~L~sgs~Dg~V~i 502 (894)
...++.+..+........|+..+..|.+ ..|.++....++..|+..+..|.++.
T Consensus 112 lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr 191 (276)
T 3no0_A 112 LTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKK 191 (276)
T ss_dssp CCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEE
T ss_pred cCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 2222366666666666667766666654 24445544455667888888888888
Q ss_pred EEcCC-------CcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCC
Q psy10063 503 FTTHD-------RQLLKTYTTERPVNSAALSPILPHVVLGGGQEA 540 (894)
Q Consensus 503 wdl~~-------~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~ 540 (894)
..+.. ++-+..+...+.+..+....+...|++.+..|.
T Consensus 192 ~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~ 236 (276)
T 3no0_A 192 ISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGK 236 (276)
T ss_dssp EEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSC
T ss_pred eEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCe
Confidence 87643 222222222344444433333345555555554
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=83.05 E-value=54 Score=35.19 Aligned_cols=166 Identities=9% Similarity=0.057 Sum_probs=92.0
Q ss_pred CCCEEEEEEccCCCEEEE--ecC-------------CCcEEEEecCCC--eEEEEecCCCCCCeeEEEEcCCCCEEEEEe
Q psy10063 409 SAKITSLLWGNLDQYIIT--GHA-------------KGDICTWDLRMG--RELESISGHAKEPINDMQFSKDATMFITAS 471 (894)
Q Consensus 409 ~~~V~~l~~spdg~~L~s--gs~-------------Dg~I~iWd~~tg--~~~~~l~~h~~~~V~~v~~spdg~~la~~~ 471 (894)
--.|..+...+++++-+. |-. --.|.+||+.++ ++++++..... -+. + +
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~-~~~-----~-~------- 151 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTR-LVE-----K-P------- 151 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGG-GCC-----C-G-------
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHH-hcc-----c-C-------
Confidence 345777777776664332 211 125889999999 98888765322 000 0 0
Q ss_pred CCCCccceEEEEEe---cC----CCEEEEE-ECCCCEEEEEcCCCcEEEEEe-------------------CCCCeeEEE
Q psy10063 472 HSQAVEPINDMQFS---KD----ATMFITA-SKDHTAKLFTTHDRQLLKTYT-------------------TERPVNSAA 524 (894)
Q Consensus 472 ~d~~i~~V~~l~~s---pd----g~~L~sg-s~Dg~V~iwdl~~~~~~~~~~-------------------~~~~v~~l~ 524 (894)
..+..|++. ++ +.++... +...-|.|+|+++++..+.+. ....+..|+
T Consensus 152 -----S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIa 226 (381)
T 3q6k_A 152 -----TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGIT 226 (381)
T ss_dssp -----GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEE
T ss_pred -----CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEE
Confidence 023444444 11 2232222 235678888888887666542 023688899
Q ss_pred EcCC----CCEEEEEECCCCeEEEeccCccceeeEEEEeccc---cceEEEccCCC---CCeEEEEEe-cCCCEEEEEeC
Q psy10063 525 LSPI----LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF---EEEFARIKGHF---GPINSLAFH-PDGKSYASGGE 593 (894)
Q Consensus 525 ~spd----g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~---~~~~~~l~~h~---~~V~~l~~s-pdg~~l~sgs~ 593 (894)
++|+ ++.|+.....+.. ++.+. .-.++. ...++.+ |.. ..-..++++ .+|.++++--.
T Consensus 227 Lsp~~~~~~~~LYf~plss~~-ly~V~---------T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~ 295 (381)
T 3q6k_A 227 LGDRDSEGNRPAYYLAGSAIK-VYSVN---------TKELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEAN 295 (381)
T ss_dssp ECCCCTTSCCEEEEEESSCSE-EEEEE---------HHHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESS
T ss_pred ecCCcCCCCeEEEEEECCCCc-EEEEE---------HHHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEecc
Confidence 9998 7888887766631 22111 000111 1112222 222 233456675 56766777777
Q ss_pred CCcEEEEECCC
Q psy10063 594 DGFLISNTLSN 604 (894)
Q Consensus 594 Dg~I~vwdl~~ 604 (894)
...|..|+...
T Consensus 296 ~~aI~~w~~~~ 306 (381)
T 3q6k_A 296 TKQVSCWNTQK 306 (381)
T ss_dssp SSEEEEEETTS
T ss_pred CCeEEEEeCCC
Confidence 88899999875
No 361
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=82.90 E-value=48 Score=34.51 Aligned_cols=64 Identities=13% Similarity=0.025 Sum_probs=39.6
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCCC-------cEEEE--EeCCCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHDR-------QLLKT--YTTERPVNSAALSPILPHVVLGGGQEAR 541 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~-------~~~~~--~~~~~~v~~l~~spdg~~l~~~~~~~~~ 541 (894)
.+..+....+...|+..+.+|.+..+.+..- +-++. +..++.|.++....++..|++.+..|..
T Consensus 152 ~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~ 224 (312)
T 1suu_A 152 FVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYG 224 (312)
T ss_dssp CEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEE
T ss_pred EEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCce
Confidence 4444444445567788888998888876431 11222 2334567777666666778888877763
No 362
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=81.94 E-value=2.3 Score=45.27 Aligned_cols=110 Identities=7% Similarity=0.008 Sum_probs=67.9
Q ss_pred CEEEEecCCCcEEEEEccCCceeeccccCC--CceEee----cCCCeEEEE--ecCCCCceeEEEeecCCcceeeeccC-
Q psy10063 773 EKLALALADKVSERYRDRKNKATAGFLLSC--PDFLFD----FDTTREVTT--TSTKVGKFDARFYHLIFEEEFARIKG- 843 (894)
Q Consensus 773 ~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~--~~~~fS----~dg~~l~~a--s~d~~g~~~I~vwd~~tg~~l~~l~g- 843 (894)
.++++++.||.|+-+|..+++.+..+.... ..+..+ +.+..++++ ..++ .|+.++.+.|.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG----~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDG----NIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTT----EEEEEETTTEEEEEEEEHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCC----EEEEEECCCCcEEeeeccc
Confidence 577888899999999988888877766542 222211 112234433 3444 588888887754432221
Q ss_pred ---CCCCeeE---EEE-----eeCCcEEEEecCCCcEEEEecCccccccccccC
Q psy10063 844 ---HFGPINS---LAF-----HPDGKSYASGGEDGFVRLHTFDQAYFDYTFDIS 886 (894)
Q Consensus 844 ---H~~~V~~---l~f-----Spdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~ 886 (894)
+..++.. ..+ +.++..+++|+.+|.+...|+..|+.+.++...
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 1222211 000 014567889999999999999999998888754
No 363
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=81.87 E-value=52 Score=34.16 Aligned_cols=129 Identities=12% Similarity=0.098 Sum_probs=66.6
Q ss_pred EEEEEEccCCCEEEEecCCCcEEEEec---C------CCeEEE-EecCCCCCCeeEEEEc---CCCCEEEEEeCCCCc--
Q psy10063 412 ITSLLWGNLDQYIITGHAKGDICTWDL---R------MGRELE-SISGHAKEPINDMQFS---KDATMFITASHSQAV-- 476 (894)
Q Consensus 412 V~~l~~spdg~~L~sgs~Dg~I~iWd~---~------tg~~~~-~l~~h~~~~V~~v~~s---pdg~~la~~~~d~~i-- 476 (894)
+..+......+.|+..+..|.++-+.. . .|..+. .+....+..|.++... .++.+|+.++..|.+
T Consensus 44 l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Kr 123 (307)
T 1zi0_A 44 IDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKK 123 (307)
T ss_dssp EEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEE
T ss_pred EEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEE
Confidence 333333444445555556676554443 2 233221 1111222256655442 356678888877765
Q ss_pred ----------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCC---------CcEEEEEeCCCCeeEEEE
Q psy10063 477 ----------------------EPINDMQFSKDATMFITASKDHTAKLFTTHD---------RQLLKTYTTERPVNSAAL 525 (894)
Q Consensus 477 ----------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~---------~~~~~~~~~~~~v~~l~~ 525 (894)
..+..+....+...|+..+.+|.+..+.+.. |.....+..++.|.++..
T Consensus 124 t~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~ 203 (307)
T 1zi0_A 124 TVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIV 203 (307)
T ss_dssp EEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEC
T ss_pred EEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEE
Confidence 1333333334445566677778777776532 111112233456777665
Q ss_pred cCCCCEEEEEECCCC
Q psy10063 526 SPILPHVVLGGGQEA 540 (894)
Q Consensus 526 spdg~~l~~~~~~~~ 540 (894)
..++..|++.+..|.
T Consensus 204 ~~~~~~ll~~T~~G~ 218 (307)
T 1zi0_A 204 PRGDGAILTATQNGY 218 (307)
T ss_dssp CCSSCEEEEEETTSE
T ss_pred ecCCCEEEEEEcCCc
Confidence 555667777777775
No 364
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=75.96 E-value=1.1e+02 Score=36.54 Aligned_cols=127 Identities=8% Similarity=0.079 Sum_probs=69.8
Q ss_pred CCCEEEEEEccC-CCEEEEecCCCcEEEEecCCCeEEEEecCCC------CCCeeEEEEcCCC-CEEEEEeCC------C
Q psy10063 409 SAKITSLLWGNL-DQYIITGHAKGDICTWDLRMGRELESISGHA------KEPINDMQFSKDA-TMFITASHS------Q 474 (894)
Q Consensus 409 ~~~V~~l~~spd-g~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~------~~~V~~v~~spdg-~~la~~~~d------~ 474 (894)
.+.|.+|+++|. ...|+.+...+.|...+ +.|+.-..+..+. ...|.+|+++|.. ..|.++... +
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999985 35666677667666665 3454433333221 1268999998843 333333211 2
Q ss_pred Cc----------c----------------ceEEEEEecC-CCEEEEEECCCCEEEEEcC-CCcEEEEEeC-------CCC
Q psy10063 475 AV----------E----------------PINDMQFSKD-ATMFITASKDHTAKLFTTH-DRQLLKTYTT-------ERP 519 (894)
Q Consensus 475 ~i----------~----------------~V~~l~~spd-g~~L~sgs~Dg~V~iwdl~-~~~~~~~~~~-------~~~ 519 (894)
.+ . .+..|++.|. ...|+.+...+. ||.-. .|+-.+.+.. ...
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCCCCC
Confidence 22 0 1345777763 345555553333 34333 3444444331 245
Q ss_pred eeEEEEcCC-CCEEEEEECC
Q psy10063 520 VNSAALSPI-LPHVVLGGGQ 538 (894)
Q Consensus 520 v~~l~~spd-g~~l~~~~~~ 538 (894)
+..|+++|. +..|+++..+
T Consensus 171 ~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEEECTTSTTCEEEEESS
T ss_pred eEEEEECCCCCCEEEEEEcC
Confidence 788889884 4566666654
No 365
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=75.69 E-value=36 Score=42.99 Aligned_cols=36 Identities=11% Similarity=-0.006 Sum_probs=28.7
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc
Q psy10063 574 GPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS 609 (894)
Q Consensus 574 ~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~ 609 (894)
+...++..++.-..++....-|.|++||+.++..+.
T Consensus 259 Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred CcceEEEeccccCEEEEEecCceEEEEecccchhhh
Confidence 344567777777788888899999999999987653
No 366
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=72.63 E-value=44 Score=33.74 Aligned_cols=64 Identities=14% Similarity=0.082 Sum_probs=40.6
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCC-------CcEEEEEeCCCCeeEEEEc-CCCCEEEEEECCCCe
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHD-------RQLLKTYTTERPVNSAALS-PILPHVVLGGGQEAR 541 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~-------~~~~~~~~~~~~v~~l~~s-pdg~~l~~~~~~~~~ 541 (894)
.|.++....++.+|+.++..|.++...+.. |.....+...+.+..+... .++..|++.+..|..
T Consensus 85 ~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~ 156 (256)
T 1zvt_A 85 TVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRM 156 (256)
T ss_dssp CEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEE
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeE
Confidence 344443324567788899999999998743 2333333344566666665 356678888888864
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=72.56 E-value=70 Score=37.31 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=30.6
Q ss_pred CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC
Q psy10063 411 KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG 449 (894)
Q Consensus 411 ~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~ 449 (894)
.|.|+.+ +..+|++-+.|+.+|||++.+++++....-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4565554 467999999999999999999999887765
No 368
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=71.19 E-value=1e+02 Score=32.12 Aligned_cols=60 Identities=13% Similarity=0.148 Sum_probs=33.3
Q ss_pred EEEEecCCCEEEEEECCCCEEEEEcCC-------CcEEEEE--eCCCCeeEEEEcCCCC-EEEEEECCCC
Q psy10063 481 DMQFSKDATMFITASKDHTAKLFTTHD-------RQLLKTY--TTERPVNSAALSPILP-HVVLGGGQEA 540 (894)
Q Consensus 481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~-------~~~~~~~--~~~~~v~~l~~spdg~-~l~~~~~~~~ 540 (894)
.+....+...|+..+.+|.+..+.+.. .+-++.+ ..++.|.++....++. .|++.+..|.
T Consensus 148 ~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~ 217 (323)
T 1wp5_A 148 DVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGA 217 (323)
T ss_dssp EEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSE
T ss_pred EEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCc
Confidence 333333445666777788877776542 1112222 2345566665544455 6777777775
No 369
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=69.23 E-value=1.8e+02 Score=34.08 Aligned_cols=72 Identities=3% Similarity=-0.064 Sum_probs=40.6
Q ss_pred CceEEEeeCCCCCEEEEecCCCc--EEEEEccCCc-eeec---ccc--CCCceEeecCCCeEEEEecCCCCceeEEEeec
Q psy10063 761 DIGFKMPEPPKREKLALALADKV--SERYRDRKNK-ATAG---FLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFYHL 832 (894)
Q Consensus 761 ~~v~~la~spdg~~Latgs~Dg~--I~iwd~~~~~-~~~~---~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~ 832 (894)
..+..+.+..+ .++++...++. |+++++..++ .+.. +.. .+....+++++..+++...+-.....|+++|+
T Consensus 350 ~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~ 428 (711)
T 4hvt_A 350 EVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVK 428 (711)
T ss_dssp EEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred CeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeC
Confidence 34567777765 56667767764 6666665543 1222 211 12223345677776666554444446888888
Q ss_pred C
Q psy10063 833 I 833 (894)
Q Consensus 833 ~ 833 (894)
.
T Consensus 429 ~ 429 (711)
T 4hvt_A 429 T 429 (711)
T ss_dssp T
T ss_pred C
Confidence 7
No 370
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=65.98 E-value=1.4e+02 Score=31.69 Aligned_cols=22 Identities=9% Similarity=-0.144 Sum_probs=13.8
Q ss_pred CeeEEEEcCC--CCEEEEEECCCC
Q psy10063 519 PVNSAALSPI--LPHVVLGGGQEA 540 (894)
Q Consensus 519 ~v~~l~~spd--g~~l~~~~~~~~ 540 (894)
.|.+|++.|. ...|+++...+.
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~gg 139 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQG 139 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCc
Confidence 4678888872 456666655443
No 371
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=65.47 E-value=84 Score=36.84 Aligned_cols=106 Identities=11% Similarity=-0.012 Sum_probs=60.1
Q ss_pred CCCEEEEecCCC------cEEEEEccCCceee--ccccC--CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeee
Q psy10063 771 KREKLALALADK------VSERYRDRKNKATA--GFLLS--CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR 840 (894)
Q Consensus 771 dg~~Latgs~Dg------~I~iwd~~~~~~~~--~~~~~--~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~ 840 (894)
++++++.|+.++ .+.+||....+-.. ..... ....+.-.+++..+.++.+..+ .+.+||..+.+-...
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDV 528 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEEC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEc
Confidence 777888887543 47888877644322 11111 1122222366666666655544 699999987643221
Q ss_pred -----ccCCCCCeeEEEEeeC-CcEEEEecC--C-----CcEEEEecCccc
Q psy10063 841 -----IKGHFGPINSLAFHPD-GKSYASGGE--D-----GFVRLHTFDQAY 878 (894)
Q Consensus 841 -----l~gH~~~V~~l~fSpd-g~~LaS~s~--D-----g~V~vWdl~~~~ 878 (894)
+........++.+..+ +++++.||. + ..|.+||+....
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 1111222234555655 778888876 2 358888988776
No 372
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.50 E-value=26 Score=43.96 Aligned_cols=42 Identities=14% Similarity=0.061 Sum_probs=35.7
Q ss_pred CeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcc
Q psy10063 847 PINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEE 888 (894)
Q Consensus 847 ~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~ 888 (894)
.|.+++..++..+|++.+.|+.+|||++.+++++...++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~~~ 280 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQT 280 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECCCS
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechhhc
Confidence 455677788889999999999999999999999988876543
No 373
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.13 E-value=20 Score=45.05 Aligned_cols=40 Identities=20% Similarity=0.212 Sum_probs=34.6
Q ss_pred cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC
Q psy10063 477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT 516 (894)
Q Consensus 477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~ 516 (894)
..+.+++..++..+|++-+.|+.+|||++.+++++.....
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 4566777788889999999999999999999999988763
No 374
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=63.85 E-value=54 Score=33.49 Aligned_cols=56 Identities=11% Similarity=0.192 Sum_probs=27.6
Q ss_pred cceeeeeccCccEEEecCCCeEEEEE-ecCCCCEEEEEEccCCCEEEEecCCCcEEEEecC
Q psy10063 380 VDRLNSMSPAARKLATNAEPVVKMQV-TDQSAKITSLLWGNLDQYIITGHAKGDICTWDLR 439 (894)
Q Consensus 380 ~~~~~~~s~dg~~l~~~~~~~~~~~l-~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~ 439 (894)
..+.+++. ||+++..+....-++-+ ......|..|+...+. .++. . ||.|+.|-..
T Consensus 33 ~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n 89 (282)
T 3qhy_B 33 YFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGN 89 (282)
T ss_dssp SSEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECC
T ss_pred CCeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCC
Confidence 34455566 88877766432110000 0112356666654332 2233 3 7888888643
No 375
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=60.15 E-value=19 Score=41.20 Aligned_cols=58 Identities=14% Similarity=0.153 Sum_probs=34.4
Q ss_pred CEEEEEEccCCCEEEEecCC------------CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEE
Q psy10063 411 KITSLLWGNLDQYIITGHAK------------GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFI 468 (894)
Q Consensus 411 ~V~~l~~spdg~~L~sgs~D------------g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la 468 (894)
..--|+|+++|++++.-..+ ..+.+.+..+|+..+.+.+..+.++..++|+||++.|+
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlf 546 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEE
Confidence 34678999999866654322 13555566667766666665554555555555555443
No 376
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=56.79 E-value=26 Score=40.84 Aligned_cols=38 Identities=5% Similarity=0.031 Sum_probs=31.2
Q ss_pred CeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccC
Q psy10063 847 PINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDIS 886 (894)
Q Consensus 847 ~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~ 886 (894)
.|.++. .+..+|++.+.|+.+|+|++.+++++...++.
T Consensus 223 ~Is~~~--~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~ 260 (729)
T 3f7f_A 223 VISCKL--FHERYLIVLTQNCHLKIWDLTSFTLIQDYDMV 260 (729)
T ss_dssp EEEEEE--ETTTEEEEEETTCEEEEEETTTTEEEEEEETT
T ss_pred eEEEec--cCCcEEEEEEcCCeEEEEEcCCCceEEeeccc
Confidence 354444 35789999999999999999999999888874
No 377
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=54.05 E-value=26 Score=40.09 Aligned_cols=60 Identities=13% Similarity=0.177 Sum_probs=42.8
Q ss_pred cceEEEEEecCCCEEEEEECC----------C--CEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEE
Q psy10063 477 EPINDMQFSKDATMFITASKD----------H--TAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGG 536 (894)
Q Consensus 477 ~~V~~l~~spdg~~L~sgs~D----------g--~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~ 536 (894)
...--|+|+++|.+++.-..+ + .+.+.+...+++.+.+.. ...+..++|+||++.|++.-
T Consensus 476 ~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred cCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 345678899999866654332 1 244556667887776665 57899999999999988753
No 378
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=51.32 E-value=2.5e+02 Score=29.93 Aligned_cols=87 Identities=7% Similarity=0.104 Sum_probs=51.1
Q ss_pred CCEEEEEEc---cC----CCEEEEec-CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063 410 AKITSLLWG---NL----DQYIITGH-AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND 481 (894)
Q Consensus 410 ~~V~~l~~s---pd----g~~L~sgs-~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~ 481 (894)
..+..|++. ++ +.+++... .++-|.|+|+.+++..+.+..+-. +-....|.-+|+.+-. . ..|..
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~-pd~~~~~~i~G~~~~~--~----~Gi~g 224 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK-AERPTKFDYGGKEYEF--K----AGIFG 224 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS-CCSCEEEEETTEEEEE--C----CCEEE
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc-cccCcceEECCEEeEe--c----cCceE
Confidence 457777777 22 33444443 457799999999998776632211 1011223333433311 1 26999
Q ss_pred EEEecC----CCEEEEEECCCCEEEEE
Q psy10063 482 MQFSKD----ATMFITASKDHTAKLFT 504 (894)
Q Consensus 482 l~~spd----g~~L~sgs~Dg~V~iwd 504 (894)
|+++|+ ++.|..+...+. ++|.
T Consensus 225 IaLsp~~~~~~~~LYf~plss~-~ly~ 250 (381)
T 3q6k_A 225 ITLGDRDSEGNRPAYYLAGSAI-KVYS 250 (381)
T ss_dssp EEECCCCTTSCCEEEEEESSCS-EEEE
T ss_pred EEecCCcCCCCeEEEEEECCCC-cEEE
Confidence 999998 788888776653 3443
No 379
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=49.29 E-value=56 Score=37.05 Aligned_cols=62 Identities=13% Similarity=0.180 Sum_probs=45.0
Q ss_pred ccceEEEEEecCCCEEEEEECC------------CCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEEC
Q psy10063 476 VEPINDMQFSKDATMFITASKD------------HTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGG 537 (894)
Q Consensus 476 i~~V~~l~~spdg~~L~sgs~D------------g~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~ 537 (894)
+.....|.|.++|.+.+..... ..|..++..++++.+.+.. ...+..++|+||++.|+++-.
T Consensus 475 fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 475 FNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred cCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 3577889999999877743221 1456666667887776654 367899999999999988753
No 380
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=47.30 E-value=26 Score=41.33 Aligned_cols=77 Identities=5% Similarity=-0.170 Sum_probs=46.0
Q ss_pred EeecCCCeEEEEecCCCC-ceeEEEeecCCcceeee-cc-CCCC------CeeEEEEeeCCcEEEEe----------cCC
Q psy10063 806 LFDFDTTREVTTTSTKVG-KFDARFYHLIFEEEFAR-IK-GHFG------PINSLAFHPDGKSYASG----------GED 866 (894)
Q Consensus 806 ~fS~dg~~l~~as~d~~g-~~~I~vwd~~tg~~l~~-l~-gH~~------~V~~l~fSpdg~~LaS~----------s~D 866 (894)
|+++|+++++++.+.+.. ...|+++|+.+++.+.. +. .-.. ....++|..++.++++. +.-
T Consensus 136 ~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 136 NCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp ECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred ecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 478888887766554433 33599999999987732 22 0000 11345887555555542 123
Q ss_pred CcEEEEecCccccccc
Q psy10063 867 GFVRLHTFDQAYFDYT 882 (894)
Q Consensus 867 g~V~vWdl~~~~~~~~ 882 (894)
..|++|.+.+.....+
T Consensus 216 ~~v~~~~~Gt~~~~~~ 231 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAK 231 (711)
T ss_dssp CEEEEEETTSCGGGCE
T ss_pred CEEEEEECCCChHHCe
Confidence 5799999876654433
No 381
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=46.87 E-value=2.9e+02 Score=29.30 Aligned_cols=127 Identities=9% Similarity=0.112 Sum_probs=65.2
Q ss_pred ccceeeeeccCccEEEecCCC-----------e-EEEEEec-CCCCEEEEEEccCCCEEEEecCCCcEEEEecCC-----
Q psy10063 379 SVDRLNSMSPAARKLATNAEP-----------V-VKMQVTD-QSAKITSLLWGNLDQYIITGHAKGDICTWDLRM----- 440 (894)
Q Consensus 379 ~~~~~~~~s~dg~~l~~~~~~-----------~-~~~~l~~-H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t----- 440 (894)
.....+++..||+++..+... . ....+.. ....|..++++.-....+.-..||.|+.|-...
T Consensus 61 G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG 140 (389)
T 3kci_A 61 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 140 (389)
T ss_dssp ETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTC
T ss_pred CCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCC
Confidence 344556778888888765321 1 1112221 223455566665555666666788888885321
Q ss_pred ------CeEEEEecCCCCCCe--------eEEEEcCCCCEEEEEeCC-CCc-------------------cceEEEEEec
Q psy10063 441 ------GRELESISGHAKEPI--------NDMQFSKDATMFITASHS-QAV-------------------EPINDMQFSK 486 (894)
Q Consensus 441 ------g~~~~~l~~h~~~~V--------~~v~~spdg~~la~~~~d-~~i-------------------~~V~~l~~sp 486 (894)
......+.......| ..+++..+|+.+..+... +.+ ..|..|+...
T Consensus 141 ~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~ 220 (389)
T 3kci_A 141 HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGS 220 (389)
T ss_dssp SSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECC
T ss_pred CCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcC
Confidence 011112221111123 345566677766666432 111 2344554433
Q ss_pred CCCEEEEEECCCCEEEEEc
Q psy10063 487 DATMFITASKDHTAKLFTT 505 (894)
Q Consensus 487 dg~~L~sgs~Dg~V~iwdl 505 (894)
...+.+.-..||.|+.|-.
T Consensus 221 g~~~t~~l~~~G~v~~wG~ 239 (389)
T 3kci_A 221 GDAQTLCLTDDDTVWSWGD 239 (389)
T ss_dssp SSCEEEEEETTTEEEEEEC
T ss_pred CCcEEEEEccCCEEEEEeC
Confidence 2345666678899999964
No 382
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=46.55 E-value=56 Score=37.04 Aligned_cols=58 Identities=14% Similarity=0.147 Sum_probs=28.7
Q ss_pred CCEEEEEEccCCCEEEEecC------------CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEE
Q psy10063 410 AKITSLLWGNLDQYIITGHA------------KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMF 467 (894)
Q Consensus 410 ~~V~~l~~spdg~~L~sgs~------------Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~l 467 (894)
.....|+|.++|.+.+.-.. ...|..++..+|++.+.+.+.....+..++|+||++.|
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktL 545 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTL 545 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEE
Confidence 44567889888876663211 11345555555655444433222134444444444433
No 383
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*
Probab=41.60 E-value=2.4e+02 Score=28.55 Aligned_cols=23 Identities=13% Similarity=0.332 Sum_probs=12.1
Q ss_pred EEEEEEccCCCEEEEecCCCcEEEEec
Q psy10063 412 ITSLLWGNLDQYIITGHAKGDICTWDL 438 (894)
Q Consensus 412 V~~l~~spdg~~L~sgs~Dg~I~iWd~ 438 (894)
...+.+..+|.+++-. .-.||.-
T Consensus 111 ~~~a~L~d~GNlVl~~----~~~lWqS 133 (276)
T 3m7h_A 111 RTHLVLQDDGNIVLVD----SLALWNG 133 (276)
T ss_dssp HEEEEECTTSCEEEEE----EEEEEES
T ss_pred ceEEEEeCCCCEEecC----CceeeCc
Confidence 3445556666655553 2346653
No 384
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=40.86 E-value=5e+02 Score=30.42 Aligned_cols=31 Identities=16% Similarity=0.294 Sum_probs=21.8
Q ss_pred cCCCCEEEEEEccCC-CEEEEecCCCcEEEEe
Q psy10063 407 DQSAKITSLLWGNLD-QYIITGHAKGDICTWD 437 (894)
Q Consensus 407 ~H~~~V~~l~~spdg-~~L~sgs~Dg~I~iWd 437 (894)
+-.+.|.+|+++|.+ ..++.+...|.|...+
T Consensus 18 g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~ 49 (763)
T 3a0f_A 18 SGGGFISGLVAHPTEKDLIYARTDIGGTYRWN 49 (763)
T ss_dssp CBCSCEEEEEECSSSTTCEEEEESSSCEEEEE
T ss_pred cCCCceeEEEeCCCCCCEEEEEeccCcEEEEC
Confidence 456799999999966 4666666556555544
No 385
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=35.74 E-value=2.2e+02 Score=32.92 Aligned_cols=64 Identities=14% Similarity=0.082 Sum_probs=40.6
Q ss_pred ceEEEEEecCCCEEEEEECCCCEEEEEcCC-------CcEEEEEeCCCCeeEEEEc-CCCCEEEEEECCCCe
Q psy10063 478 PINDMQFSKDATMFITASKDHTAKLFTTHD-------RQLLKTYTTERPVNSAALS-PILPHVVLGGGQEAR 541 (894)
Q Consensus 478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~-------~~~~~~~~~~~~v~~l~~s-pdg~~l~~~~~~~~~ 541 (894)
.|..+-...+..+|+.++..|.|+...+.. |.....+..++.+..+... ..+..|+..+..|..
T Consensus 555 ~i~~~~~~~~~~~l~~~T~~G~vk~~~l~~~~~~~~~g~~ai~L~~~d~lv~~~~~~~~~~~v~l~t~~g~~ 626 (716)
T 1zvu_A 555 TVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRM 626 (716)
T ss_dssp CEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEE
T ss_pred eEEEEEEecCCceEEEEeCCceEEEecHHHhcccCccceEEEeeCCCCEEEEEEEecCCCCEEEEEeCCCeE
Confidence 344443334677888899999999988753 2233334445566666665 345678888888863
No 386
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=34.99 E-value=5e+02 Score=29.20 Aligned_cols=53 Identities=11% Similarity=0.019 Sum_probs=36.2
Q ss_pred eEEEEeccccceEEEccCC-----CCCeEEEEE-ecCC----CEEEEEeCCCcEEEEECCCCc
Q psy10063 554 DARFYHLIFEEEFARIKGH-----FGPINSLAF-HPDG----KSYASGGEDGFLISNTLSNGL 606 (894)
Q Consensus 554 ~v~vwd~~~~~~~~~l~~h-----~~~V~~l~~-spdg----~~l~sgs~Dg~I~vwdl~~~~ 606 (894)
.|.+.|+.+|..+.++... ...+..+.. ..|+ .+++.|...|.|.-+|+....
T Consensus 224 ~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~~~~ 286 (570)
T 3hx6_A 224 ALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAGK 286 (570)
T ss_dssp EEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECSCSS
T ss_pred EEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEcCCCC
Confidence 3888999999988876421 123334433 2333 479999999999989987654
No 387
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=33.09 E-value=6e+02 Score=29.90 Aligned_cols=108 Identities=12% Similarity=0.174 Sum_probs=51.7
Q ss_pred ceEEEEEecC-CCEEEEEECCCC----EEEEEc-CCCcEEEEEeCC----------CCeeEEEEcCCC-CEEEEEECCCC
Q psy10063 478 PINDMQFSKD-ATMFITASKDHT----AKLFTT-HDRQLLKTYTTE----------RPVNSAALSPIL-PHVVLGGGQEA 540 (894)
Q Consensus 478 ~V~~l~~spd-g~~L~sgs~Dg~----V~iwdl-~~~~~~~~~~~~----------~~v~~l~~spdg-~~l~~~~~~~~ 540 (894)
.|.+|++.|. ...|+.+..+.. ..||.- ..|+-...+... ..+..|+++|.. ..|+++...+.
T Consensus 65 ~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g 144 (789)
T 1sqj_A 65 GTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG 144 (789)
T ss_dssp SEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC
T ss_pred ceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC
Confidence 5889999983 344555543322 345543 445555544321 135678888754 45555443332
Q ss_pred eEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecC-CCEEEEEeCC
Q psy10063 541 REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD-GKSYASGGED 594 (894)
Q Consensus 541 ~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd-g~~l~sgs~D 594 (894)
||.-......|.. +-.. ..+......+..|.++|. +..|+.+..+
T Consensus 145 --l~~S~DgG~TW~~-~~~~------~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 145 --IWKSSDRAKTWTN-VTSI------PDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp --EEEESSTTSSCEE-ETTS------CCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred --EEEECCCCcccCC-CccC------ccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 2322222222211 1000 000011245788888874 4456666554
No 388
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=31.21 E-value=2.4e+02 Score=23.82 Aligned_cols=24 Identities=8% Similarity=0.181 Sum_probs=12.5
Q ss_pred EEEEEccCCCEEEEecCCCcEEEEecC
Q psy10063 413 TSLLWGNLDQYIITGHAKGDICTWDLR 439 (894)
Q Consensus 413 ~~l~~spdg~~L~sgs~Dg~I~iWd~~ 439 (894)
..+.|..||.+++.- . .-.||...
T Consensus 22 ~~l~~~~dGnlvl~~--~-~~~vW~sn 45 (110)
T 3a0c_A 22 YRLIMQGDCNFVLYD--S-GKPVWASN 45 (110)
T ss_dssp EEEEECTTSCEEEEE--T-TEEEEECC
T ss_pred EEEEEcCCCcEEEEE--C-CEEEEECC
Confidence 445566666655543 1 24556543
No 389
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=30.67 E-value=2.3e+02 Score=23.78 Aligned_cols=13 Identities=8% Similarity=0.238 Sum_probs=8.0
Q ss_pred EEEEcCCCCEEEE
Q psy10063 457 DMQFSKDATMFIT 469 (894)
Q Consensus 457 ~v~~spdg~~la~ 469 (894)
.+.+..||.+++.
T Consensus 54 ~L~l~~dGnLvL~ 66 (105)
T 4h3o_A 54 SAVLQSDGNFVVY 66 (105)
T ss_dssp EEEECTTSCEEEE
T ss_pred EEEEeCCccEEEE
Confidence 4666667766554
No 390
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=29.48 E-value=2.6e+02 Score=23.72 Aligned_cols=42 Identities=12% Similarity=0.165 Sum_probs=20.7
Q ss_pred eEEEEcCCCCEEEEEeCCCCccceEEEEEec-----CCCEEEEEECCCCEEEEE
Q psy10063 456 NDMQFSKDATMFITASHSQAVEPINDMQFSK-----DATMFITASKDHTAKLFT 504 (894)
Q Consensus 456 ~~v~~spdg~~la~~~~d~~i~~V~~l~~sp-----dg~~L~sgs~Dg~V~iwd 504 (894)
..+.+..+|.+++.-. ++. . .|+. .+.+.+.-..||.++||+
T Consensus 59 ~~l~l~~dGNLVl~d~-~~~--~----iW~S~t~~~~~~~~~~L~~dGnlvly~ 105 (113)
T 3mez_B 59 CFMRLGHSGELDITDD-RLN--T----VFVSNTVGQEGDYVLILQINGQAVVYG 105 (113)
T ss_dssp CEEEECTTSCEEEECT-TSC--E----EEECSCCCSSSCCEEEECTTSCEEEEC
T ss_pred EEEEEeCCCcEEEECC-CCC--E----EEECCCcCCCCCEEEEEcCCceEEEec
Confidence 3556666776665532 221 1 1222 123444555667666664
No 391
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=29.09 E-value=6.2e+02 Score=27.92 Aligned_cols=17 Identities=29% Similarity=0.475 Sum_probs=9.0
Q ss_pred cCCCEEEEEeCCCcEEE
Q psy10063 583 PDGKSYASGGEDGFLIS 599 (894)
Q Consensus 583 pdg~~l~sgs~Dg~I~v 599 (894)
.+|+||..-+.+|.|.+
T Consensus 226 ~~GkYL~~~g~~g~L~~ 242 (493)
T 3llp_A 226 CEGRYLAPSGPSGTLKA 242 (493)
T ss_dssp TTSCBEEEETTTTEEEE
T ss_pred CCCCEEeEECCCCeEEe
Confidence 35555555444555554
No 392
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=26.49 E-value=4.8e+02 Score=25.82 Aligned_cols=53 Identities=11% Similarity=0.184 Sum_probs=33.7
Q ss_pred CeeEEEEcCCCCEEEEEeCCCCc------------------------cceEEEEEe-cCCCEEEEEECCCCEEEEEcC
Q psy10063 454 PINDMQFSKDATMFITASHSQAV------------------------EPINDMQFS-KDATMFITASKDHTAKLFTTH 506 (894)
Q Consensus 454 ~V~~v~~spdg~~la~~~~d~~i------------------------~~V~~l~~s-pdg~~L~sgs~Dg~V~iwdl~ 506 (894)
.|.++....++.+|+.++..|.+ ..+..+... .+...|+..+.+|.+..+.+.
T Consensus 85 ~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 85 TVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp CEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 67776444566778888877765 233333344 245567777888888878764
No 393
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=22.90 E-value=3.6e+02 Score=23.10 Aligned_cols=13 Identities=8% Similarity=0.250 Sum_probs=7.2
Q ss_pred EEEEcCCCCEEEE
Q psy10063 457 DMQFSKDATMFIT 469 (894)
Q Consensus 457 ~v~~spdg~~la~ 469 (894)
.+.+..+|.+++.
T Consensus 64 ~l~l~~dGNLVl~ 76 (119)
T 1b2p_A 64 RAVLQPDGVLVVI 76 (119)
T ss_dssp EEEECTTSCEEEE
T ss_pred EEEEccCCEEEEE
Confidence 4555566665554
No 394
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=21.83 E-value=7.1e+02 Score=26.09 Aligned_cols=113 Identities=5% Similarity=-0.195 Sum_probs=51.9
Q ss_pred CCCEEEEEECCCCEEEEEcCC-Cc--------EE--EEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063 487 DATMFITASKDHTAKLFTTHD-RQ--------LL--KTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF 553 (894)
Q Consensus 487 dg~~L~sgs~Dg~V~iwdl~~-~~--------~~--~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~ 553 (894)
...+.+.-..||.|+.|-... ++ .. ..+.. ...|..++......+.++...++.+..|-.......-
T Consensus 167 G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG 246 (389)
T 3kci_A 167 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 246 (389)
T ss_dssp CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTS
T ss_pred CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCC
Confidence 345556667899999996432 11 11 11111 2345566554433455556666654444221100000
Q ss_pred eEEEEeccccceEEEccC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063 554 DARFYHLIFEEEFARIKG-HFGPINSLAFHPDGKSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 554 ~v~vwd~~~~~~~~~l~~-h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~ 604 (894)
. -+.........+.. ....|..|+.. ..+.+....||.|+.|-...
T Consensus 247 -~--g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 247 -R--GGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp -S--SSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCG
T ss_pred -C--CCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCC
Confidence 0 00000001111221 12246666553 34555567889999997644
No 395
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=21.82 E-value=3.6e+02 Score=22.62 Aligned_cols=77 Identities=10% Similarity=0.204 Sum_probs=33.6
Q ss_pred EEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe-cCCCEE
Q psy10063 413 TSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS-KDATMF 491 (894)
Q Consensus 413 ~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s-pdg~~L 491 (894)
..+.|..||.+++... .-.||...+.. .. .-..+.+..+|.+++.... +. .|++-.-. ..+.+.
T Consensus 21 ~~L~~q~dGnLvly~~---~~~vW~snt~~--------~~-~~~~l~l~~dGNLvl~~~~-~~--~~W~S~t~~~~~~~~ 85 (109)
T 3dzw_A 21 YVFIMQEDCNLVLYDV---DKPIWATNTGG--------LD-RRCHLSMQSDGNLVVYSPR-NN--PIWASNTGGENGNYV 85 (109)
T ss_dssp EEEEECTTSCEEEEET---TEEEEECCCTT--------SS-SSCEEEECTTSCEEEECTT-SC--EEEECCCCCSSSCEE
T ss_pred EEEEEcCCCcEEEEeC---CEEEEECCccc--------CC-CCEEEEEeCCCCEEEECCC-CC--EEEECCCCCCCCCEE
Confidence 4455556666555332 24566643321 11 1234566666766554321 11 12111000 112344
Q ss_pred EEEECCCCEEEEE
Q psy10063 492 ITASKDHTAKLFT 504 (894)
Q Consensus 492 ~sgs~Dg~V~iwd 504 (894)
+.-..||.+.|++
T Consensus 86 ~~L~ddGNlvly~ 98 (109)
T 3dzw_A 86 CVLQKDRNVVIYG 98 (109)
T ss_dssp EEECTTSCEEEEE
T ss_pred EEEeCCCEEEEEC
Confidence 5555666666665
No 396
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=20.10 E-value=7.9e+02 Score=25.97 Aligned_cols=29 Identities=10% Similarity=-0.214 Sum_probs=18.7
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063 574 GPINSLAFHPDGKSYASGGEDGFLISNTLSN 604 (894)
Q Consensus 574 ~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~ 604 (894)
..|..|+. -..+.+....||.|+.|-...
T Consensus 294 ~~v~~ia~--G~~ht~alt~~G~v~~wG~n~ 322 (423)
T 3mvd_K 294 KDIRHIAG--GQHHTVILTTDLKCSVVGRPE 322 (423)
T ss_dssp CSEEEEEE--CSSEEEEEETTCCEEEEECCG
T ss_pred CCeEEEEc--ccCeEEEEeCCCcEEEEECCC
Confidence 35666554 334566667889999996543
Done!