Your job contains 1 sequence.
>psy10064
MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN
HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR
WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF
DANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQHVKPKL
NVKLKAPSSSGVSRDQK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10064
(257 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0034402 - symbol:CG15084 species:7227 "Drosophila ... 807 2.2e-80 1
UNIPROTKB|F1SD79 - symbol:CCDC130 "Uncharacterized protei... 671 5.8e-66 1
UNIPROTKB|Q5EA37 - symbol:CCDC130 "Coiled-coil domain-con... 666 2.0e-65 1
UNIPROTKB|P13994 - symbol:CCDC130 "Coiled-coil domain-con... 666 2.0e-65 1
MGI|MGI:1914986 - symbol:Ccdc130 "coiled-coil domain cont... 648 1.6e-63 1
RGD|1307598 - symbol:Ccdc130 "coiled-coil domain containi... 648 1.6e-63 1
WB|WBGene00014250 - symbol:ZK1307.9 species:6239 "Caenorh... 568 4.8e-55 1
UNIPROTKB|Q09651 - symbol:ZK1307.9 "Coiled-coil domain-co... 568 4.8e-55 1
DICTYBASE|DDB_G0281599 - symbol:ccdc130 "coiled-coil doma... 467 2.4e-44 1
TAIR|locus:2824443 - symbol:AT1G25682 "AT1G25682" species... 422 1.4e-39 1
UNIPROTKB|F1MLB3 - symbol:CCDC130 "Coiled-coil domain-con... 385 1.2e-35 1
ASPGD|ASPL0000012035 - symbol:AN10484 species:162425 "Eme... 326 2.1e-29 1
POMBASE|SPBC18H10.10c - symbol:saf4 "splicing associated ... 294 5.2e-26 1
MGI|MGI:1920136 - symbol:Ccdc94 "coiled-coil domain conta... 227 6.5e-19 1
DICTYBASE|DDB_G0279481 - symbol:ccdc94 "putative RNA spli... 221 2.8e-18 1
ZFIN|ZDB-GENE-040426-841 - symbol:ccdc94 "coiled-coil dom... 222 2.9e-18 1
POMBASE|SPAC9.13c - symbol:cwf16 "splicing factor (predic... 215 1.2e-17 1
TAIR|locus:2020367 - symbol:AT1G17130 "AT1G17130" species... 215 1.7e-17 1
ASPGD|ASPL0000015659 - symbol:AN8001 species:162425 "Emer... 212 2.5e-17 1
FB|FBgn0034084 - symbol:CG8435 species:7227 "Drosophila m... 210 5.9e-17 1
UNIPROTKB|G4MZ75 - symbol:MGG_12308 "Cell cycle control p... 205 1.4e-16 1
TAIR|locus:2084726 - symbol:AT3G43250 "AT3G43250" species... 192 3.3e-15 1
CGD|CAL0005297 - symbol:orf19.5465 species:5476 "Candida ... 166 5.6e-15 2
SGD|S000001578 - symbol:YJU2 "Essential protein required ... 180 6.3e-14 1
TAIR|locus:2045447 - symbol:AT2G32050 "AT2G32050" species... 174 2.7e-13 1
WB|WBGene00018149 - symbol:F37C12.1 species:6239 "Caenorh... 156 1.5e-09 1
TAIR|locus:2043102 - symbol:AT2G29430 "AT2G29430" species... 109 5.3e-06 1
TAIR|locus:2824453 - symbol:AT1G25988 "AT1G25988" species... 109 1.8e-05 2
>FB|FBgn0034402 [details] [associations]
symbol:CG15084 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:AE013599 eggNOG:COG5134 KO:K13115
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
GeneTree:ENSGT00530000063615 OMA:FDDAMYK EMBL:AY070525
RefSeq:NP_611383.1 UniGene:Dm.693 PRIDE:Q7K0F0
EnsemblMetazoa:FBtr0086619 GeneID:37178 KEGG:dme:Dmel_CG15084
UCSC:CG15084-RA FlyBase:FBgn0034402 InParanoid:Q7K0F0
OrthoDB:EOG4F1VJW PhylomeDB:Q7K0F0 GenomeRNAi:37178 NextBio:802337
Bgee:Q7K0F0 Uniprot:Q7K0F0
Length = 316
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 147/234 (62%), Positives = 171/234 (73%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
MGERKG NKYYPPDYDP GGLNKF GTHALRERARK+H+GI+IIRFE+PYNIWC+GC N
Sbjct: 1 MGERKGQNKYYPPDYDPKKGGLNKFQGTHALRERARKIHLGIIIIRFEMPYNIWCDGCKN 60
Query: 61 HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
HIGMGVRYNAEK KVGMYY+TPV++FRMKCHLCD+HFEI+TDPGNLDYVI+SGARRQENR
Sbjct: 61 HIGMGVRYNAEKTKVGMYYTTPVFKFRMKCHLCDNHFEIQTDPGNLDYVILSGARRQENR 120
Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
W+PL+NEQ+VPETKEV ++LFDD MYKLEH D + L KL++R SVW + +
Sbjct: 121 WDPLQNEQVVPETKEVQKRLFDDAMYKLEHQAKDAKAGADARPVLQKLVERNMSVWDDSY 180
Query: 181 DANRVLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYKYQ 234
AN LR FR +PE D +A+L K Q
Sbjct: 181 MANSRLRAEFRQQKKEINGQQELDRQLLAKSSLDIALLPETTQDREMAALMKLQ 234
>UNIPROTKB|F1SD79 [details] [associations]
symbol:CCDC130 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009615 "response to virus" evidence=IEA] GO:GO:0009615
KO:K13115 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
GeneTree:ENSGT00530000063615 OMA:RSWFPSA EMBL:CU855962
RefSeq:XP_003123393.1 UniGene:Ssc.4489 Ensembl:ENSSSCT00000015029
GeneID:100525683 KEGG:ssc:100525683 Uniprot:F1SD79
Length = 398
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 130/255 (50%), Positives = 166/255 (65%)
Query: 1 MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
MGERKG NKYYPPD++P G LN++ +H LRERARKL GI+IIRFE+PYNIWC+GC
Sbjct: 1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60
Query: 60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA+R+E
Sbjct: 61 NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEE 120
Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
RW+ +NEQ++ E +KL D MY+LEHG D S+ K L+ + + Q + WK+D
Sbjct: 121 RWDMADNEQVLTTEHEKKQKLETDAMYRLEHGEADRSTLKKALPTLSHIQEAQNA-WKDD 179
Query: 180 FDANRVLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYKYQHVKPK 239
F N +LR FR A VPE ++D RLA+L K+ H
Sbjct: 180 FALNSMLRKRFREKKKAMLEEEERDQALQAKASLAIPLVPETEDDRRLAALLKF-HTLDS 238
Query: 240 LNVKLKAPSSSGVSR 254
K K + +SR
Sbjct: 239 YEDKQKLKRTEIISR 253
>UNIPROTKB|Q5EA37 [details] [associations]
symbol:CCDC130 "Coiled-coil domain-containing protein 130"
species:9913 "Bos taurus" [GO:0009615 "response to virus"
evidence=IEA] GO:GO:0009615 EMBL:BT020695 EMBL:BT020732
EMBL:BT020748 EMBL:BC113236 IPI:IPI00689027 IPI:IPI00717572
RefSeq:NP_001069812.1 UniGene:Bt.65196 PRIDE:Q5EA37 GeneID:614791
KEGG:bta:614791 CTD:81576 eggNOG:COG5134 HOGENOM:HOG000239030
HOVERGEN:HBG081031 KO:K13115 NextBio:20899291 ArrayExpress:Q5EA37
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502 Uniprot:Q5EA37
Length = 400
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 130/255 (50%), Positives = 166/255 (65%)
Query: 1 MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
MGERKG NKYYPPD++P G LN++ +H LRERARKL GI+IIRFE+PYNIWC+GC
Sbjct: 1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60
Query: 60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA+R+E
Sbjct: 61 NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEE 120
Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
RW+ +NEQ++ E +KL D M++LEHG D S+ K L+ + + Q S WK+D
Sbjct: 121 RWDMEDNEQVLTTEHEKKQKLEMDAMFRLEHGEADRSTLKKALPTLSHIQEAQ-SAWKDD 179
Query: 180 FDANRVLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYKYQHVKPK 239
F N +LR FR A VPE ++D RLA+L K+ H
Sbjct: 180 FALNSMLRKRFREKKKAMQEEEERDQALQAKASLAIPLVPETEDDRRLAALLKF-HTLDS 238
Query: 240 LNVKLKAPSSSGVSR 254
K K + +SR
Sbjct: 239 YEDKQKLKRTEIISR 253
>UNIPROTKB|P13994 [details] [associations]
symbol:CCDC130 "Coiled-coil domain-containing protein 130"
species:9606 "Homo sapiens" [GO:0009615 "response to virus"
evidence=IEP] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0009615 CTD:81576
eggNOG:COG5134 HOGENOM:HOG000239030 HOVERGEN:HBG081031 KO:K13115
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502 EMBL:AF250306
EMBL:BC002905 EMBL:X13956 IPI:IPI00011306 PIR:S02660
RefSeq:NP_110445.1 UniGene:Hs.24998 ProteinModelPortal:P13994
IntAct:P13994 MINT:MINT-1389809 STRING:P13994 DMDM:134037158
PRIDE:P13994 DNASU:81576 Ensembl:ENST00000221554 GeneID:81576
KEGG:hsa:81576 UCSC:uc002mxc.1 GeneCards:GC19P013860
HGNC:HGNC:28118 neXtProt:NX_P13994 PharmGKB:PA162381331
InParanoid:P13994 OMA:RSWFPSA OrthoDB:EOG4T783D PhylomeDB:P13994
GenomeRNAi:81576 NextBio:71888 ArrayExpress:P13994 Bgee:P13994
CleanEx:HS_CCDC130 Genevestigator:P13994 GermOnline:ENSG00000104957
Uniprot:P13994
Length = 396
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 129/255 (50%), Positives = 166/255 (65%)
Query: 1 MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
MGERKG NKYYPPD++P G LN++ +H LRERARKL GI+IIRFE+PYNIWC+GC
Sbjct: 1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60
Query: 60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA+R+E
Sbjct: 61 NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEE 120
Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
RW+ +NEQ++ E +KL D M++LEHG D S+ K L+ + + Q S WK+D
Sbjct: 121 RWDMADNEQVLTTEHEKKQKLETDAMFRLEHGEADRSTLKKALPTLSHIQEAQ-SAWKDD 179
Query: 180 FDANRVLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYKYQHVKPK 239
F N +LR FR A VPE ++D +LA+L K+ H
Sbjct: 180 FALNSMLRRRFREKKKAIQEEEERDQALQAKASLTIPLVPETEDDRKLAALLKF-HTLDS 238
Query: 240 LNVKLKAPSSSGVSR 254
K K + +SR
Sbjct: 239 YEDKQKLKRTEIISR 253
>MGI|MGI:1914986 [details] [associations]
symbol:Ccdc130 "coiled-coil domain containing 130"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1914986
GO:GO:0009615 CTD:81576 eggNOG:COG5134 HOGENOM:HOG000239030
HOVERGEN:HBG081031 KO:K13115 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 GeneTree:ENSGT00530000063615 OMA:RSWFPSA
OrthoDB:EOG4T783D EMBL:AK015911 EMBL:BC021321 IPI:IPI00317200
IPI:IPI00830539 RefSeq:NP_080626.1 UniGene:Mm.30095
PhosphoSite:Q9D516 PRIDE:Q9D516 DNASU:67736
Ensembl:ENSMUST00000005120 Ensembl:ENSMUST00000098578 GeneID:67736
KEGG:mmu:67736 UCSC:uc009mml.1 UCSC:uc012ghi.1 InParanoid:Q9D516
NextBio:325421 Bgee:Q9D516 CleanEx:MM_CCDC130 Genevestigator:Q9D516
Uniprot:Q9D516
Length = 385
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 122/233 (52%), Positives = 156/233 (66%)
Query: 1 MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
MGERKG NKYYPPD++P G LN++ +H LRERARKL GI++IRFE+PYNIWC+GC
Sbjct: 1 MGERKGQNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILVIRFEMPYNIWCDGCK 60
Query: 60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA R+E
Sbjct: 61 NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGASRKEE 120
Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
RW+ +NEQ++ E KL D M++LEHG D S+ K L+ + + Q + WK+D
Sbjct: 121 RWDMEDNEQVLTTEHEKKEKLETDAMFRLEHGEADRSTLKKALPTLSHIQEAQNA-WKDD 179
Query: 180 FDANRVLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYK 232
F N +LR FR A VPE ++D RLA+L +
Sbjct: 180 FALNSMLRRHFREKKKAMQEEEEKDQALQAKASLAIPLVPESEDDRRLAALLR 232
>RGD|1307598 [details] [associations]
symbol:Ccdc130 "coiled-coil domain containing 130" species:10116
"Rattus norvegicus" [GO:0009615 "response to virus"
evidence=IEA;ISO] RGD:1307598 GO:GO:0009615 CTD:81576
eggNOG:COG5134 HOGENOM:HOG000239030 HOVERGEN:HBG081031 KO:K13115
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
GeneTree:ENSGT00530000063615 OrthoDB:EOG4T783D EMBL:BC107912
IPI:IPI00371657 RefSeq:NP_001032733.1 UniGene:Rn.7862 PRIDE:Q32PZ9
Ensembl:ENSRNOT00000011150 GeneID:304656 KEGG:rno:304656
InParanoid:Q32PZ9 NextBio:653432 ArrayExpress:Q32PZ9
Genevestigator:Q32PZ9 Uniprot:Q32PZ9
Length = 385
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 123/233 (52%), Positives = 156/233 (66%)
Query: 1 MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
MGERKG NKYYPPD++P G LN++ +H LRERARKL GI+IIRFE+PYNIWC+GC
Sbjct: 1 MGERKGQNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60
Query: 60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA R+E
Sbjct: 61 NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGASRKEE 120
Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
RW+ +NEQ++ E KL D M++LEHG D S+ K L+ + + Q + WK+D
Sbjct: 121 RWDMEDNEQVLTTEHEKKEKLETDAMFRLEHGEADRSTLKKALPTLSHIQEAQNA-WKDD 179
Query: 180 FDANRVLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYK 232
F N +LR FR A VPE ++D RLA+L +
Sbjct: 180 FALNSMLRRHFREKKKAMQEEEEKDQALQAKANLAIPLVPESEDDRRLAALLR 232
>WB|WBGene00014250 [details] [associations]
symbol:ZK1307.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 eggNOG:COG5134 HOGENOM:HOG000239030
KO:K13115 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
EMBL:Z47358 PIR:T27732 RefSeq:NP_496077.1 ProteinModelPortal:Q09651
DIP:DIP-24831N IntAct:Q09651 MINT:MINT-1091593 STRING:Q09651
PaxDb:Q09651 EnsemblMetazoa:ZK1307.9 GeneID:174518
KEGG:cel:CELE_ZK1307.9 UCSC:ZK1307.9 CTD:174518 WormBase:ZK1307.9
GeneTree:ENSGT00530000063615 InParanoid:Q09651 OMA:FDDAMYK
NextBio:884368 Uniprot:Q09651
Length = 369
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 111/240 (46%), Positives = 153/240 (63%)
Query: 1 MGERKGTNKYYPPDYDPSVG-GLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
MGERKG N YYPPD++ LN + GTHALRERA+K+ GI++IRFE+P+NIWC GC+
Sbjct: 1 MGERKGQNFYYPPDFNYKTHKSLNGYHGTHALRERAKKIDQGILVIRFEMPFNIWCLGCH 60
Query: 60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
NH+GMGVRYNAEKKK+GMYY+TP+++FRMKCHLCD+++ I+TDP N DY +V G RQE
Sbjct: 61 NHVGMGVRYNAEKKKIGMYYTTPLHEFRMKCHLCDNYYVIRTDPKNFDYELVEGCSRQEL 120
Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
R++P + QI + ++KL D M+K EH D + ++ ++KL QE + ++D
Sbjct: 121 RFDPTDIAQIGAVDRGFTQKLAADAMFKKEHEAEDKDKAATEEGRVDKLEWIQERM-RDD 179
Query: 180 FDANRVLRDSFRXXXXXXXXXXXX-XNAXXXXXXXXXXXVPEHKNDIRLASLY-KYQHVK 237
F AN LR FR N +PE + D R+AS+ +Y+ K
Sbjct: 180 FTANSFLRAQFRNEKKSLNETRARDANLRDKLSIGTTQLLPETEEDRRIASMMTRYRDTK 239
>UNIPROTKB|Q09651 [details] [associations]
symbol:ZK1307.9 "Coiled-coil domain-containing protein 130
homolog" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] GO:GO:0009792 eggNOG:COG5134
HOGENOM:HOG000239030 KO:K13115 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 EMBL:Z47358 PIR:T27732 RefSeq:NP_496077.1
ProteinModelPortal:Q09651 DIP:DIP-24831N IntAct:Q09651
MINT:MINT-1091593 STRING:Q09651 PaxDb:Q09651
EnsemblMetazoa:ZK1307.9 GeneID:174518 KEGG:cel:CELE_ZK1307.9
UCSC:ZK1307.9 CTD:174518 WormBase:ZK1307.9
GeneTree:ENSGT00530000063615 InParanoid:Q09651 OMA:FDDAMYK
NextBio:884368 Uniprot:Q09651
Length = 369
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 111/240 (46%), Positives = 153/240 (63%)
Query: 1 MGERKGTNKYYPPDYDPSVG-GLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
MGERKG N YYPPD++ LN + GTHALRERA+K+ GI++IRFE+P+NIWC GC+
Sbjct: 1 MGERKGQNFYYPPDFNYKTHKSLNGYHGTHALRERAKKIDQGILVIRFEMPFNIWCLGCH 60
Query: 60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
NH+GMGVRYNAEKKK+GMYY+TP+++FRMKCHLCD+++ I+TDP N DY +V G RQE
Sbjct: 61 NHVGMGVRYNAEKKKIGMYYTTPLHEFRMKCHLCDNYYVIRTDPKNFDYELVEGCSRQEL 120
Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
R++P + QI + ++KL D M+K EH D + ++ ++KL QE + ++D
Sbjct: 121 RFDPTDIAQIGAVDRGFTQKLAADAMFKKEHEAEDKDKAATEEGRVDKLEWIQERM-RDD 179
Query: 180 FDANRVLRDSFRXXXXXXXXXXXX-XNAXXXXXXXXXXXVPEHKNDIRLASLY-KYQHVK 237
F AN LR FR N +PE + D R+AS+ +Y+ K
Sbjct: 180 FTANSFLRAQFRNEKKSLNETRARDANLRDKLSIGTTQLLPETEEDRRIASMMTRYRDTK 239
>DICTYBASE|DDB_G0281599 [details] [associations]
symbol:ccdc130 "coiled-coil domain-containing protein
130" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0281599 EMBL:AAFI02000042 eggNOG:COG5134 KO:K13115
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
RefSeq:XP_640527.1 EnsemblProtists:DDB0305013 GeneID:8623137
KEGG:ddi:DDB_G0281599 OMA:RTINDYQ ProtClustDB:CLSZ2497202
Uniprot:Q54TR4
Length = 325
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 87/201 (43%), Positives = 130/201 (64%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
M ERK TNKYYPPD+DPS G +N++ G H LR+RARK+ GI+IIRFE+P+++WC GC
Sbjct: 1 MAERKATNKYYPPDWDPSKGSINQYRGQHHLRDRARKIDQGILIIRFEMPFSVWCLGCEC 60
Query: 61 HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
HIGMGVR+NAEKK V Y+++ +Y F+MKCH C + FEI+ DP N DY ++SG +++ +
Sbjct: 61 HIGMGVRFNAEKKTVDKYFTSNIYSFKMKCHQCSNQFEIQNDPKNTDYKLISGLKKRIEQ 120
Query: 121 WNPLENEQ----IVP------ETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLD 170
+NP ++E I+ + +D + KLE+ D+ K +++ L KL +
Sbjct: 121 FNPEDSELPSSFIIKYDDNNNNNNNNNNNDNNDTLLKLENKKLDIEKGKKESTQLEKLQE 180
Query: 171 RQESVWKNDFDANRVLRDSFR 191
+ ND+ + ++R SFR
Sbjct: 181 IMTNRTINDYQLSSIMRKSFR 201
>TAIR|locus:2824443 [details] [associations]
symbol:AT1G25682 "AT1G25682" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC084221
eggNOG:COG5134 HOGENOM:HOG000239030 KO:K13115 InterPro:IPR007590
PANTHER:PTHR12111 Pfam:PF04502 OMA:RSWFPSA EMBL:BT011673
EMBL:AK221692 IPI:IPI00532188 PIR:D86386 RefSeq:NP_173930.1
UniGene:At.27526 EnsemblPlants:AT1G25682.1 GeneID:839146
KEGG:ath:AT1G25682 TAIR:At1g25682 InParanoid:Q9C609
PhylomeDB:Q9C609 ProtClustDB:CLSN2682627 Genevestigator:Q9C609
Uniprot:Q9C609
Length = 310
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 87/230 (37%), Positives = 126/230 (54%)
Query: 5 KGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHIGM 64
+ N YYPP++ P G LNKF G H LRERA+K+ GI++IRFE+PYNIWC GC++ I
Sbjct: 8 RADNFYYPPEWTPDQGSLNKFQGQHPLRERAKKIGEGILVIRFEMPYNIWCGGCSSMIAK 67
Query: 65 GVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWNPL 124
GVR+NAEKK+VG YYST ++ F MK C I+TDP N +YVI SGA+++ +
Sbjct: 68 GVRFNAEKKQVGNYYSTKIWSFAMKSPCCKHEIVIQTDPQNCEYVITSGAQKKVEEYEA- 126
Query: 125 ENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDFDANR 184
E+ + + T E + DP Y+LEH D+ K+ L +L ++ +D+ N+
Sbjct: 127 EDAETMELTAEQEKGKLADPFYRLEHQEVDLQKKKAAEPLLVRLQRVSDARHADDYSLNK 186
Query: 185 VLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYKYQ 234
LR R +P+ + DI+ AS K++
Sbjct: 187 ALRAQLRRHRKRVAEEETASRKLGLGIRL----LPKSEEDIKAASNVKFK 232
>UNIPROTKB|F1MLB3 [details] [associations]
symbol:CCDC130 "Coiled-coil domain-containing protein 130"
species:9913 "Bos taurus" [GO:0009615 "response to virus"
evidence=IEA] GO:GO:0009615 IPI:IPI00717572 InterPro:IPR007590
PANTHER:PTHR12111 Pfam:PF04502 GeneTree:ENSGT00530000063615
EMBL:DAAA02019358 Ensembl:ENSBTAT00000003269 OMA:RTEITHR
ArrayExpress:F1MLB3 Uniprot:F1MLB3
Length = 334
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 83/190 (43%), Positives = 111/190 (58%)
Query: 65 GVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWNPL 124
GVRYNAEKK VG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA+R+E RW+
Sbjct: 1 GVRYNAEKK-VGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEERWDME 59
Query: 125 ENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDFDANR 184
+NEQ++ E +KL D M++LEHG D S+ K L+ + + Q S WK+DF N
Sbjct: 60 DNEQVLTTEHEKKQKLEMDAMFRLEHGEADRSTLKKALPTLSHIQEAQ-SAWKDDFALNS 118
Query: 185 VLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYKYQHVKPKLNVKL 244
+LR FR A VPE ++D RLA+L K+ H K
Sbjct: 119 MLRKRFREKKKAMQEEEERDQALQAKASLAIPLVPETEDDRRLAALLKF-HTLDSYEDKQ 177
Query: 245 KAPSSSGVSR 254
K + +SR
Sbjct: 178 KLKRTEIISR 187
>ASPGD|ASPL0000012035 [details] [associations]
symbol:AN10484 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] EMBL:BN001302 InterPro:IPR007590
PANTHER:PTHR12111 Pfam:PF04502 EnsemblFungi:CADANIAT00004794
HOGENOM:HOG000216114 OMA:RANKISQ Uniprot:C8V6A1
Length = 383
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 73/191 (38%), Positives = 103/191 (53%)
Query: 9 KYYPPDYDPSVGGLNKFLGTHALRERARKLHM-GIMIIRFELPYNIWCEGCN--NHIGMG 65
+Y PPD + + NK H L RAR L G +I+RFE+P+ +WC C+ N IG G
Sbjct: 8 RYIPPDQE-GLTTANKLHNKHPLGSRARHLQSKGALIVRFEMPFAVWCTTCSPENIIGQG 66
Query: 66 VRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN-RWNPL 124
VR+NAEKKKVG YYSTPVY FRMK LC EI+TDP N YV+ G RR++ + +
Sbjct: 67 VRFNAEKKKVGNYYSTPVYSFRMKHTLCGGWIEIRTDPKNTAYVVTEGGRRRDTGQADGT 126
Query: 125 E----NEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
+ E ++ DDP +LE D + + +L +Q+ W + +
Sbjct: 127 DLIGGGEILLGGRSAAGAAAGDDPFARLEGKVEDKRIVDETRNRILELQQKQDRDWDDPY 186
Query: 181 DANRVLRDSFR 191
+ ++ LR FR
Sbjct: 187 EVSKRLRRGFR 197
>POMBASE|SPBC18H10.10c [details] [associations]
symbol:saf4 "splicing associated factor Saf4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=IC]
PomBase:SPBC18H10.10c EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0005681 eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 GO:GO:0045292 PIR:T39774 RefSeq:NP_595734.2
IntAct:O60141 GeneID:2540801 OrthoDB:EOG4MKRR4 NextBio:20801919
Uniprot:O60141
Length = 299
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 55/149 (36%), Positives = 87/149 (58%)
Query: 44 IIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDP 103
+IRFE+P+ +WC C N I G R+NA KK++G YY+T ++ F +KCHLC + ++ TDP
Sbjct: 27 VIRFEMPFPVWCNNCENIIQQGTRFNAVKKEIGSYYTTKIWSFSLKCHLCSNPIDVHTDP 86
Query: 104 GNLDYVIVSGARRQENRWNPLE-NEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKA 162
N +Y++ SG RR + P + NE+ P E K+ D + LE S K +
Sbjct: 87 KNTEYIVASGGRR---KIEPQDINER--PAKAENDEKVPSDAIEALETQLTQQKSEKHNS 141
Query: 163 SHLNKLLDRQESVWKNDFDANRVLRDSFR 191
S +N + ++ E +W + F +++ LR FR
Sbjct: 142 SVINFIYEKNERLWSDPFVSSQRLRKQFR 170
>MGI|MGI:1920136 [details] [associations]
symbol:Ccdc94 "coiled-coil domain containing 94"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1920136
eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
GeneTree:ENSGT00530000063615 EMBL:AK013533 EMBL:BC031400
IPI:IPI00109162 RefSeq:NP_082657.1 UniGene:Mm.22796 STRING:Q9D6J3
PhosphoSite:Q9D6J3 PRIDE:Q9D6J3 Ensembl:ENSMUST00000086869
GeneID:72886 KEGG:mmu:72886 UCSC:uc008dak.1 CTD:55702
HOGENOM:HOG000160812 HOVERGEN:HBG053135 InParanoid:Q9D6J3
OMA:RKVESWE OrthoDB:EOG43FGXZ ChiTaRS:CCDC94 NextBio:337083
Bgee:Q9D6J3 CleanEx:MM_CCDC94 Genevestigator:Q9D6J3
GermOnline:ENSMUSG00000003208 Uniprot:Q9D6J3
Length = 314
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 59/184 (32%), Positives = 88/184 (47%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
M ERK NKYYPPD+DPS K ++R ++R P+N+ C+ C
Sbjct: 1 MSERKVLNKYYPPDFDPS-----KIPKLKLPKDRQ-------YVVRLMAPFNMRCKTCGE 48
Query: 61 HIGMGVRYNAEKKKVG--MYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQE 118
+I G ++NA K+ V Y P+++F +KC C + KTDP N DY + GA R
Sbjct: 49 YIYKGKKFNARKETVQNEAYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNF 108
Query: 119 NRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKN 178
LE E+ + + +L ++PM LE+ T D +L +L D +
Sbjct: 109 QAEKLLEEEEKRVQKEREDEEL-NNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHV 167
Query: 179 DFDA 182
DF+A
Sbjct: 168 DFEA 171
>DICTYBASE|DDB_G0279481 [details] [associations]
symbol:ccdc94 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0279481 GenomeReviews:CM000152_GR EMBL:AAFI02000031
eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
RefSeq:XP_641652.1 STRING:Q54WR5 EnsemblProtists:DDB0233745
GeneID:8622059 KEGG:ddi:DDB_G0279481 InParanoid:Q54WR5 OMA:RYDEERE
Uniprot:Q54WR5
Length = 324
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 63/189 (33%), Positives = 91/189 (48%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
MGERK +KYYPPD+DPS K R K + LP +I C C
Sbjct: 1 MGERKVISKYYPPDFDPS-----KVAKIKVKRPTFTK-------VTTMLPMSIRCNTCGE 48
Query: 61 HIGMGVRYNAEKKKVGM--YYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQE 118
+IG G ++NA+K+ V Y +Y+F ++C C + IKTDP N +YV SGA R
Sbjct: 49 YIGRGTKFNAKKETVQNEDYLGIKIYRFFLRCKKCAAELTIKTDPKNSEYVCESGATRNY 108
Query: 119 NRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKN 178
W + E+ TKE + D M LE+ T + SK + L+ L + + +N
Sbjct: 109 EPWKETDEEKSNRMTKEQEEE--QDAMIALENRTLE---SKREMEMLDALEEIKSLNSRN 163
Query: 179 -DFDANRVL 186
+ D ++L
Sbjct: 164 SEIDTEQLL 172
>ZFIN|ZDB-GENE-040426-841 [details] [associations]
symbol:ccdc94 "coiled-coil domain containing 94"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IMP]
ZFIN:ZDB-GENE-040426-841 GO:GO:0043524 GO:GO:0043518 eggNOG:COG5134
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
GeneTree:ENSGT00530000063615 CTD:55702 HOGENOM:HOG000160812
HOVERGEN:HBG053135 OrthoDB:EOG43FGXZ OMA:VDFEGMI EMBL:BX248231
EMBL:BC171445 EMBL:BC171449 IPI:IPI00610445 RefSeq:NP_001104303.1
UniGene:Dr.82487 STRING:A8WHR3 Ensembl:ENSDART00000036813
GeneID:393117 KEGG:dre:393117 NextBio:20814189 Uniprot:A8WHR3
Length = 345
Score = 222 (83.2 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 56/183 (30%), Positives = 89/183 (48%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
M ERK NKYYPPD+DPS K ++R ++R P+N+ C+ C
Sbjct: 1 MSERKVLNKYYPPDFDPS-----KIPKLKLPKDRQ-------YVVRLMAPFNMRCKTCGE 48
Query: 61 HIGMGVRYNAEKKKVG--MYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQE 118
+I G ++NA K+ V +Y P+++F +KC C + KTDP N DY + GA R
Sbjct: 49 YIYKGKKFNARKETVQNELYLGLPIFRFYIKCTRCLAEITFKTDPENTDYAMEHGATRNF 108
Query: 119 NRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKN 178
+E E+ + + +L ++PM LE+ T D +L +L + + +
Sbjct: 109 QAEKLIEEEEKKIQQEREDEEL-NNPMKVLENRTRDSKLEMEVLENLQELKELNQRQAQV 167
Query: 179 DFD 181
DF+
Sbjct: 168 DFE 170
>POMBASE|SPAC9.13c [details] [associations]
symbol:cwf16 "splicing factor (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IC] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=TAS] PomBase:SPAC9.13c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0044732 GO:GO:0005681
eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
HOGENOM:HOG000160812 GO:GO:0045292 OrthoDB:EOG4R274F PIR:T39198
RefSeq:XP_001713052.1 IntAct:Q9P7C5 STRING:Q9P7C5
EnsemblFungi:SPAC9.13c.1 GeneID:3361543 KEGG:spo:SPAC9.13c
OMA:NTCHEYI NextBio:20811586 Uniprot:Q9P7C5
Length = 270
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 54/174 (31%), Positives = 85/174 (48%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
M ERK NKY PPDYDPS+ K +++ + + G + +R P+++ C C
Sbjct: 1 MSERKVLNKYIPPDYDPSIRPPKK-------KKKFQGPNGGKLTVRLMTPFSMRCHTCGE 53
Query: 61 HIGMGVRYNAEKKKVG-MYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
+I G ++NA K+K G Y+S + +F ++C C + TDP + DY SGA R
Sbjct: 54 YIYKGKKFNARKEKTGEKYFSIDILRFYIRCTRCAAEITFITDPKHADYAAESGASRNYE 113
Query: 120 RWNPLENEQIVPETKEVSRKLF--DDPMYKLEHGTNDMSSSKSKASHLNKLLDR 171
W+ + Q E + R +D M KLE T D + L++L ++
Sbjct: 114 PWHE-KRLQEYEENELAERNDIPEEDEMEKLEQKTLDTKRQMQISDALDELREK 166
>TAIR|locus:2020367 [details] [associations]
symbol:AT1G17130 "AT1G17130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 EMBL:AC007651 eggNOG:COG5134
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
HOGENOM:HOG000160812 UniGene:At.48200 UniGene:At.70431
IPI:IPI00846985 RefSeq:NP_001077550.1 PaxDb:A8MR03 PRIDE:A8MR03
EnsemblPlants:AT1G17130.2 GeneID:838283 KEGG:ath:AT1G17130
TAIR:At1g17130 OMA:VDFEGMI PhylomeDB:A8MR03 ProtClustDB:CLSN2681878
Genevestigator:A8MR03 Uniprot:A8MR03
Length = 338
Score = 215 (80.7 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 54/163 (33%), Positives = 81/163 (49%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
MGERK NKYYPPD+DP A +R R+ + +R LP ++ C C N
Sbjct: 1 MGERKVLNKYYPPDFDP------------AKLQRLRRPKNQQIKVRMMLPMSVRCGTCGN 48
Query: 61 HIGMGVRYNAEKKKV-G--------MYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIV 111
+I G ++N+ K+ V G Y +++F KC C + +KTDP N DY++
Sbjct: 49 YIYKGTKFNSRKEDVIGENFSFDVQTYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVE 108
Query: 112 SGARRQENRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTND 154
SGA R W E+E++ + ++ + D M LE+ T D
Sbjct: 109 SGASRNYEPWRA-EDEEVDKDKQKRDAEEMGDAMKSLENRTLD 150
>ASPGD|ASPL0000015659 [details] [associations]
symbol:AN8001 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] EMBL:AACD01000138
EMBL:BN001302 eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 HOGENOM:HOG000160812 OrthoDB:EOG4R274F
RefSeq:XP_681270.1 STRING:Q5AUM9 EnsemblFungi:CADANIAT00004021
GeneID:2869066 KEGG:ani:AN8001.2 OMA:RCSGEIT Uniprot:Q5AUM9
Length = 272
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
M ERK KYYPPD+DPS + + H LR K ++ +R P+++ C C
Sbjct: 1 MSERKVLTKYYPPDFDPSA--ITR-TPKH-LRSSGPK----VITVRLMAPFSMKCTQCGE 52
Query: 61 HIGMGVRYNAEKKKVG-MYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
+I G ++NA K+ Y+S P+Y+F ++C C TDP N+DY GA+R
Sbjct: 53 YIYKGRKFNARKETTEEKYFSIPIYRFYIRCTRCSGEITFLTDPKNMDYRAEKGAKRNFE 112
Query: 120 RW------NPLENEQIV-----PETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKL 168
W N E EQ V E E +L D M +LE D + A L+++
Sbjct: 113 PWRDSKADNHEETEQEVLDRLEREENEEQEQLERDKMAELEEKMLDSKREMAIADALDEI 172
Query: 169 LDRQESVWKND 179
R + +++
Sbjct: 173 RTRNARIERSE 183
>FB|FBgn0034084 [details] [associations]
symbol:CG8435 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] EMBL:AE013599
GO:GO:0022008 eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 GeneTree:ENSGT00530000063615 EMBL:AY118949
RefSeq:NP_611092.2 UniGene:Dm.9146 IntAct:Q7JVH0 STRING:Q7JVH0
EnsemblMetazoa:FBtr0087249 GeneID:36789 KEGG:dme:Dmel_CG8435
UCSC:CG8435-RA FlyBase:FBgn0034084 InParanoid:Q7JVH0 OMA:NRRQQTV
OrthoDB:EOG4FBG8W GenomeRNAi:36789 NextBio:800389 Uniprot:Q7JVH0
Length = 333
Score = 210 (79.0 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 60/180 (33%), Positives = 84/180 (46%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
M ERK NKYYPPD+DPS K + R +R P+N+ C+ C
Sbjct: 1 MSERKVLNKYYPPDFDPS-----KIPRMKLAKNRQ-------YTVRLMAPFNMRCKTCGE 48
Query: 61 HIGMGVRYNAEKKKVG--MYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQE 118
+I G ++NA K+ V Y +Y+F +KC C KTDP N DY I +GA R
Sbjct: 49 YIYKGKKFNARKEDVENETYLGIRIYRFYIKCTRCLQEISFKTDPQNTDYEIEAGATRNF 108
Query: 119 NRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLD---RQESV 175
L EQ E +E+ + ++PM LE+ T + L +L D RQ++V
Sbjct: 109 MALK-LAEEQARREEQELRDEEANNPMKLLENRTQQSRNEIETIESLEELRDLNRRQQTV 167
>UNIPROTKB|G4MZ75 [details] [associations]
symbol:MGG_12308 "Cell cycle control protein cwf16"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005816 "spindle pole body" evidence=ISS] GO:GO:0005816
GO:GO:0005681 GO:GO:0000398 EMBL:CM001232 InterPro:IPR007590
PANTHER:PTHR12111 Pfam:PF04502 RefSeq:XP_003715154.1
EnsemblFungi:MGG_12308T0 GeneID:5050909 KEGG:mgr:MGG_12308
Uniprot:G4MZ75
Length = 306
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 57/195 (29%), Positives = 87/195 (44%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLH-MGIMIIRFELPYNIWCEGCN 59
M ERK KYYP D+DPS L + R R K + +R P+++ C C
Sbjct: 1 MSERKVLTKYYPADFDPSA--LTR-------RRRGPKQEGPKVQTVRLMAPFSMKCTTCG 51
Query: 60 NHIGMGVRYNAEKKKVG-MYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQE 118
+I G ++NA K+ Y +Y+F +KC C +TDP N DYV +GA R
Sbjct: 52 EYIYRGRKFNARKETPEEKYLGIQIYRFYIKCTRCSGEIRFRTDPANQDYVCETGAHRNT 111
Query: 119 NRWNPLENEQIVPETKEVSR--KLFDDP-----MYKLEHGTNDMSSSKSKASHLNKLLDR 171
+ W + + PE + R +L + M +LE T D + A L+++ R
Sbjct: 112 DPWKRGAGDAVAPEETDEERLDRLEHEEEERNAMVELEAKTVDAKREMAVADALDEIRTR 171
Query: 172 QESVWKNDFDANRVL 186
+ + D D V+
Sbjct: 172 NARIARADRDGIEVV 186
>TAIR|locus:2084726 [details] [associations]
symbol:AT3G43250 "AT3G43250" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009620 "response to fungus" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=RCA] [GO:0010200
"response to chitin" evidence=RCA] [GO:0050832 "defense response to
fungus" evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL353871 eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 HOGENOM:HOG000160812 IPI:IPI00540430 PIR:T49239
RefSeq:NP_189911.1 UniGene:At.53688 PRIDE:Q9LXK9 DNASU:823400
EnsemblPlants:AT3G43250.1 GeneID:823400 KEGG:ath:AT3G43250
TAIR:At3g43250 InParanoid:Q9LXK9 OMA:DVITETY PhylomeDB:Q9LXK9
ProtClustDB:CLSN2683275 Genevestigator:Q9LXK9 Uniprot:Q9LXK9
Length = 249
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 45/130 (34%), Positives = 65/130 (50%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
MGERK NKYYPPD+DP K H +++ + IRF LP + C C N
Sbjct: 1 MGERKNLNKYYPPDFDPK-----KI---HRIKKPKNQQKK----IRFMLPVRVRCNTCGN 48
Query: 61 HIGMGVRYNAEKKKV--GMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQE 118
++ G ++N ++ V Y +++F +KC C + IKTDP N Y + SGA
Sbjct: 49 YMSEGTKFNCRQEDVITETYLGLKIHRFYIKCTKCLAELTIKTDPKNHSYTVESGASCLY 108
Query: 119 NRWNPLENEQ 128
N +E E+
Sbjct: 109 NGHEDIEEEK 118
>CGD|CAL0005297 [details] [associations]
symbol:orf19.5465 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0005816
"spindle pole body" evidence=IEA] [GO:0000384 "first spliceosomal
transesterification activity" evidence=IEA] [GO:0000349 "generation
of catalytic spliceosome for first transesterification step"
evidence=IEA] CGD:CAL0005297 eggNOG:COG5134 InterPro:IPR007590
PANTHER:PTHR12111 Pfam:PF04502 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717742.1 RefSeq:XP_717836.1 STRING:Q5A7K1 GeneID:3640567
GeneID:3640690 KEGG:cal:CaO19.12920 KEGG:cal:CaO19.5465
Uniprot:Q5A7K1
Length = 232
Score = 166 (63.5 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 47/149 (31%), Positives = 68/149 (45%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
M ERK NK+YPPDYDPS K R +K + IR PY++ C C+
Sbjct: 1 MSERKAINKWYPPDYDPS-----KI-------PRPKKNANQPIKIRMMAPYSMRCLKCDE 48
Query: 61 HIGMGVRYNAEKKKVG-MYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
+IG +NA K+ Y + + +F + C C++ KTDP N Y GA R
Sbjct: 49 YIGARRSFNARKEITNEKYLNIKIIRFYITCPGCNNTITFKTDPKNAGYTPEEGAVRNYE 108
Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKL 148
+ P E E + + ++ +D Y L
Sbjct: 109 KAKPTETEDDI--LARLQKEEEEDQKYHL 135
Score = 39 (18.8 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 232 KYQHVKPKLNVKLKAPSSSGVSRD 255
K QH KL+ +L+A + V++D
Sbjct: 161 KEQHHHQKLDQQLEAIQARAVNKD 184
>SGD|S000001578 [details] [associations]
symbol:YJU2 "Essential protein required for pre-mRNA
splicing" species:4932 "Saccharomyces cerevisiae" [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0071006 "U2-type catalytic step 1 spliceosome" evidence=IDA]
[GO:0000384 "first spliceosomal transesterification activity"
evidence=IDA] SGD:S000001578 EMBL:X71133 EMBL:BK006944
GO:GO:0000349 eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 GeneTree:ENSGT00530000063615 HOGENOM:HOG000160812
GO:GO:0071006 EMBL:X66245 EMBL:Z28095 PIR:S25355 RefSeq:NP_012828.1
ProteinModelPortal:P28320 DIP:DIP-1915N IntAct:P28320
MINT:MINT-393919 STRING:P28320 PaxDb:P28320 PeptideAtlas:P28320
EnsemblFungi:YKL095W GeneID:853767 KEGG:sce:YKL095W CYGD:YKL095w
OMA:IRLMTPF OrthoDB:EOG4R274F NextBio:974858 Genevestigator:P28320
GermOnline:YKL095W Uniprot:P28320
Length = 278
Score = 180 (68.4 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 50/178 (28%), Positives = 84/178 (47%)
Query: 1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
M ERK NKYYPPDY+P K + + ++ + ++ IR P+++ C CN
Sbjct: 1 MSERKAINKYYPPDYNPLEA--EKL--SRKMAKKLKTMNKSHASIRLMTPFSMRCLECNE 56
Query: 61 HIGMGVRYNAEKKKVGMYY--STPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQE 118
+I ++N +K+ + Y S +Y+ + C C + +TDPGN DYV+ G R
Sbjct: 57 YIPKSRKFNGKKELLKEKYLDSIKIYRLTISCPRCANSIAFRTDPGNSDYVMEVGGVRNY 116
Query: 119 NRWNPLENEQIVPETKEVSRKLFDDPMYKL----EHGTNDMSSSKSKASHLNKLLDRQ 172
P N+ + +T S D+ + +L E N+ K +A LL+++
Sbjct: 117 VPQKP--NDDLNAKTAVES---IDETLQRLVREKEMEQNEKMGIKEQADDKMDLLEKR 169
>TAIR|locus:2045447 [details] [associations]
symbol:AT2G32050 "AT2G32050" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006223
eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
HOGENOM:HOG000160812 ProtClustDB:CLSN2683275 EMBL:DQ056561
IPI:IPI00518717 PIR:D84728 RefSeq:NP_180765.1 UniGene:At.66288
EnsemblPlants:AT2G32050.1 GeneID:817765 KEGG:ath:AT2G32050
TAIR:At2g32050 InParanoid:Q9SKZ4 OMA:KINCREE PhylomeDB:Q9SKZ4
ArrayExpress:Q9SKZ4 Genevestigator:Q9SKZ4 Uniprot:Q9SKZ4
Length = 254
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 43/117 (36%), Positives = 60/117 (51%)
Query: 1 MGERKGTNKYYPPDYDPS-VGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
MGERKG NKYYPP++DP + + K + + RK IR +P I C C
Sbjct: 1 MGERKGLNKYYPPNFDPKQIPRIRK------PKNQQRK-------IRSMVPLRIRCNTCG 47
Query: 60 NHIGMGVRYNA-EKKKVG-MYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGA 114
N++ G + N E+ +G Y +++F KC C + +KTDP N YV SGA
Sbjct: 48 NYMSEGTKINCREENVIGETYLGIKIHRFYFKCSKCCTELILKTDPKNSSYVAESGA 104
>WB|WBGene00018149 [details] [associations]
symbol:F37C12.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0040022 "feminization of hermaphroditic
germ-line" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0016477 GO:GO:0008406
GO:GO:0002119 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
GO:GO:0040022 eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 GeneTree:ENSGT00530000063615 HOGENOM:HOG000160812
OMA:NTCHEYI EMBL:FO081316 PIR:T28837 RefSeq:NP_498576.1
ProteinModelPortal:Q20124 STRING:Q20124 PaxDb:Q20124
EnsemblMetazoa:F37C12.1 GeneID:176010 KEGG:cel:CELE_F37C12.1
UCSC:F37C12.1 CTD:176010 WormBase:F37C12.1 InParanoid:Q20124
NextBio:890722 Uniprot:Q20124
Length = 323
Score = 156 (60.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 51/174 (29%), Positives = 78/174 (44%)
Query: 3 ERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHI 62
ERK KYYPPD+DPS K A ++ R+ +M P+N+ C C+ +I
Sbjct: 5 ERKVFQKYYPPDFDPS-----KI--PRAKGQKNRQFVQRVMT-----PFNMQCNTCHEYI 52
Query: 63 GMGVRYNAEKKKV-G-MYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
G ++N +++ G Y +++F +C C + KTD N DY GA R
Sbjct: 53 YKGKKFNMKRETAEGETYLGLKLFRFYFRCPNCLAEITFKTDLENCDYQNEHGATRLFEA 112
Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQES 174
+++Q + +E DPM LE T S+ + + L D QES
Sbjct: 113 VKLYQDQQKQVDEQEAEDA--KDPMKMLEKRT---MQSRQEMEEMGNLEDLQES 161
>TAIR|locus:2043102 [details] [associations]
symbol:AT2G29430 "AT2G29430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004561
eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
IPI:IPI00544453 PIR:C84696 RefSeq:NP_180504.1 UniGene:At.74521
UniGene:At.75070 PRIDE:Q9ZW25 EnsemblPlants:AT2G29430.1
GeneID:3768235 KEGG:ath:AT2G29430 TAIR:At2g29430
HOGENOM:HOG000154050 OMA:TNGSHEM PhylomeDB:Q9ZW25
Genevestigator:Q9ZW25 Uniprot:Q9ZW25
Length = 84
Score = 109 (43.4 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 49 LPYNIWCEGCNNHIGMGVRYNAEKKKV-G-MYYSTPVYQFRMKCHLCDSHFEIKTDPGNL 106
LP + C C+N + G ++ + + V G Y +++F+++C + +TDP N
Sbjct: 10 LPMRLQCNNCDNIMSKGTKFTSRVEDVIGETYLGIKIFRFQIQCTNGSHEMKFRTDPKNA 69
Query: 107 DYVIVSGARR 116
D++I SGA R
Sbjct: 70 DFIIESGATR 79
>TAIR|locus:2824453 [details] [associations]
symbol:AT1G25988 "AT1G25988" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC084221
eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
IPI:IPI00540403 PIR:G86386 RefSeq:NP_173933.1 UniGene:At.51767
PaxDb:Q9C606 PRIDE:Q9C606 EnsemblPlants:AT1G25988.1 GeneID:839149
KEGG:ath:AT1G25988 TAIR:At1g25988 PhylomeDB:Q9C606
Genevestigator:Q9C606 Uniprot:Q9C606
Length = 180
Score = 109 (43.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 96 HFEIKTDPGNLDYVIVSGARRQENRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDM 155
+F KTDP N +YVI SGA+++ + E+ + + T E + DP Y+LEH D+
Sbjct: 23 NFGHKTDPQNCEYVITSGAQKKVEEYEA-EDAETMELTAEQEKGKLADPFYRLEHQEVDL 81
Query: 156 SSSKSKASHLNKL 168
K+ L +L
Sbjct: 82 QKKKAAEPFLVRL 94
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 8 NKYYPPDYDPSVGGLNK 24
N YPPD+ P+ N+
Sbjct: 4 NFNYPPDWTPNQSKENR 20
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 257 233 0.00086 113 3 11 22 0.43 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 607 (65 KB)
Total size of DFA: 205 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.13u 0.10s 21.23t Elapsed: 00:00:14
Total cpu time: 21.14u 0.10s 21.24t Elapsed: 00:00:14
Start: Thu Aug 15 13:02:08 2013 End: Thu Aug 15 13:02:22 2013