BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10065
(215 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24186|RS5A_DROME 40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=2
SV=1
Length = 228
Score = 335 bits (860), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/197 (82%), Positives = 177/197 (89%), Gaps = 1/197 (0%)
Query: 19 DPAYPSESTGGPVGL-SSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFL 77
+PA P E+ L +++ + ELPEIKLFGRWSCDDV V+D+SLQDYI+VKEK A++L
Sbjct: 14 EPAAPMEAEVAETILETNVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYL 73
Query: 78 PHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPL 137
PHSAGRYAAKRFRKAQCPIVERLT SLMM GRNN KKLMA RIVKH+FEIIHLLTGENPL
Sbjct: 74 PHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPL 133
Query: 138 QILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTI 197
QILV+AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTI
Sbjct: 134 QILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTI 193
Query: 198 AECVADELINAAKFNQN 214
AEC+ADELINAAK + N
Sbjct: 194 AECLADELINAAKGSSN 210
>sp|P46782|RS5_HUMAN 40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4
Length = 204
Score = 334 bits (856), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/180 (88%), Positives = 170/180 (94%), Gaps = 2/180 (1%)
Query: 37 AAPA--ELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQC 94
AAPA E P+IKLFG+WS DDVQ++D+SLQDYIAVKEK AK+LPHSAGRYAAKRFRKAQC
Sbjct: 7 AAPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQC 66
Query: 95 PIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDST 154
PIVERLTNS+MMHGRNN KKLM VRIVKHAFEIIHLLTGENPLQ+LV AIINSGPREDST
Sbjct: 67 PIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDST 126
Query: 155 RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAK + N
Sbjct: 127 RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSN 186
>sp|Q5E988|RS5_BOVIN 40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3
Length = 204
Score = 334 bits (856), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/180 (88%), Positives = 170/180 (94%), Gaps = 2/180 (1%)
Query: 37 AAPA--ELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQC 94
AAPA E P+IKLFG+WS DDVQ++D+SLQDYIAVKEK AK+LPHSAGRYAAKRFRKAQC
Sbjct: 7 AAPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQC 66
Query: 95 PIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDST 154
PIVERLTNS+MMHGRNN KKLM VRIVKHAFEIIHLLTGENPLQ+LV AIINSGPREDST
Sbjct: 67 PIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDST 126
Query: 155 RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAK + N
Sbjct: 127 RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSN 186
>sp|P97461|RS5_MOUSE 40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3
Length = 204
Score = 332 bits (850), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/177 (88%), Positives = 167/177 (94%)
Query: 38 APAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIV 97
A AE P+IKLFG+WS DDVQ++D+SLQDYIAVKEK AK+LPHSAGRYAAKRFRKAQCPIV
Sbjct: 10 AVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIV 69
Query: 98 ERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIG 157
ERLTNS+MMHGRNN KKLM VRIVKHAFEIIHLLTGENPLQ+LV AIINSGPREDSTRIG
Sbjct: 70 ERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIG 129
Query: 158 RAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
RAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK IAEC+ADELINAAK + N
Sbjct: 130 RAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKNIAECLADELINAAKGSSN 186
>sp|P24050|RS5_RAT 40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=1 SV=3
Length = 204
Score = 326 bits (836), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 155/181 (85%), Positives = 167/181 (92%)
Query: 34 SSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQ 93
++ A AE P+IKLFG+WS DDVQ++D+SLQDYIAVKEK AK+LPHSAGRYAA FRKAQ
Sbjct: 6 TATPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANGFRKAQ 65
Query: 94 CPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDS 153
CPIVERLTNS+MMHGRNN KKLM VRIVKHAFEIIHLLTGENPLQ+LV AIINSGPREDS
Sbjct: 66 CPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDS 125
Query: 154 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQ 213
TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINA K +
Sbjct: 126 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINARKGSS 185
Query: 214 N 214
N
Sbjct: 186 N 186
>sp|Q9VFE4|RS5B_DROME 40S ribosomal protein S5b OS=Drosophila melanogaster GN=RpS5b PE=2
SV=1
Length = 230
Score = 318 bits (815), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 147/174 (84%), Positives = 162/174 (93%)
Query: 41 ELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERL 100
E PEIKLFGRW+CDD+ +SD+SLQDYIAVKEK A++LPHSAGRYAAKRFRKAQCPIVERL
Sbjct: 39 EWPEIKLFGRWACDDISISDISLQDYIAVKEKFARYLPHSAGRYAAKRFRKAQCPIVERL 98
Query: 101 TNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAG 160
T+ LMM GR+N KKL+A RIVKHAFEIIHLLT ENPLQ+ V AI+NSGPREDSTRIGRAG
Sbjct: 99 TSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGPREDSTRIGRAG 158
Query: 161 TVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
TVRRQAVDVSPLRRVNQAIWL+CTGAREAAFRNIKT+AEC+ADELINAAK + N
Sbjct: 159 TVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAAKGSSN 212
>sp|P49041|RS5_CAEEL 40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=3
SV=1
Length = 210
Score = 307 bits (787), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 169/204 (82%), Gaps = 13/204 (6%)
Query: 12 MAEDWDADPAYPSESTGGPVGLSSIAAPA-ELPEIKLFGRWSCDDVQVSDMSLQDYIAVK 70
MA++W G + + AAPA E PE+ LFG+WS V VSD+SL DYI VK
Sbjct: 1 MADNW------------GSENVVADAAPATEAPEVALFGKWSLQSVNVSDISLVDYIPVK 48
Query: 71 EKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHL 130
EK+AK+LPHSAGR+ +RFRKA CPIVERL NSLMMHGRNN KKLM VRIVKHAFEII+L
Sbjct: 49 EKSAKYLPHSAGRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYL 108
Query: 131 LTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAA 190
LTGENP+Q+LV A+INSGPREDSTRIGRAGTVRRQAVDV+PLRRVNQAIWLLCTGAREAA
Sbjct: 109 LTGENPVQVLVNAVINSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAA 168
Query: 191 FRNIKTIAECVADELINAAKFNQN 214
FRN+KTIAEC+ADELINAAK + N
Sbjct: 169 FRNVKTIAECLADELINAAKGSSN 192
>sp|Q08364|RS5_PODCA 40S ribosomal protein S5 OS=Podocoryne carnea GN=RPS5 PE=2 SV=1
Length = 210
Score = 296 bits (758), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 166/203 (81%), Gaps = 11/203 (5%)
Query: 12 MAEDWDADPAYPSESTGGPVGLSSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKE 71
M E W P E+ P + E+ +IKLFG+W + + +SD+SL DYIAVK+
Sbjct: 1 MEESW----GEPGETVEEPTSI-------EVQDIKLFGKWPLEGLNISDISLTDYIAVKD 49
Query: 72 KNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLL 131
+A +LPH+A RYA KRFRKAQCPIVERLTNSLMMHGRNN KKLMAVRIV+H+FEI+HLL
Sbjct: 50 NHAVYLPHTAARYAVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVRHSFEIMHLL 109
Query: 132 TGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAF 191
TGENPLQ++ AI NSGPREDSTRIGRAGTVRRQAVDV+PLRRVNQAIWLLCTGAREA+F
Sbjct: 110 TGENPLQLVCEAISNSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREASF 169
Query: 192 RNIKTIAECVADELINAAKFNQN 214
RNIK+IAEC+ADELINAA+ + N
Sbjct: 170 RNIKSIAECLADELINAARGSSN 192
>sp|O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2
SV=1
Length = 197
Score = 285 bits (729), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 133/172 (77%), Positives = 154/172 (89%), Gaps = 1/172 (0%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAV-KEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTN 102
E+KLF RWS DDVQ+SD+SL DYI V K+A ++PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 103 SLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTV 162
SLMMHGRNN KKLMAVRI+KHA EIIHLLT +NP+Q++V A++NSGPRED+TRIG AG V
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127
Query: 163 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIK+IAEC+ADELINAAK + N
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSN 179
>sp|Q9ZUT9|RS51_ARATH 40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1
SV=1
Length = 207
Score = 285 bits (729), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/172 (77%), Positives = 153/172 (88%), Gaps = 1/172 (0%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVK-EKNAKFLPHSAGRYAAKRFRKAQCPIVERLTN 102
E+KLF RWS DDV V+D+SL DYI V+ K+A F+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 18 EVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 77
Query: 103 SLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTV 162
SLMMHGRNN KKLMAVRIVKHA EIIHLL+ NP+Q+++ AI+NSGPRED+TRIG AG V
Sbjct: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVV 137
Query: 163 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAEC+ADELINAAK + N
Sbjct: 138 RRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSN 189
>sp|P51427|RS52_ARATH 40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1
SV=2
Length = 207
Score = 283 bits (724), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 132/172 (76%), Positives = 153/172 (88%), Gaps = 1/172 (0%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKE-KNAKFLPHSAGRYAAKRFRKAQCPIVERLTN 102
E+KLF RW+ DDV V+D+SL DYI V+ K+A F+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 18 EVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 77
Query: 103 SLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTV 162
SLMMHGRNN KKLMAVRIVKHA EIIHLL+ NP+Q+++ AI+NSGPRED+TRIG AG V
Sbjct: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVV 137
Query: 163 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
RRQAVD+SPLRRVNQAI+L+ TGAREAAFRNIKTIAEC+ADELINAAK + N
Sbjct: 138 RRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADELINAAKGSSN 189
>sp|Q7RVI1|RS5_NEUCR 40S ribosomal protein S5 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rps-5
PE=3 SV=2
Length = 213
Score = 276 bits (707), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 152/175 (86%), Gaps = 2/175 (1%)
Query: 40 AELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVER 99
AE+ +KLF RWS +DV++ D+SL DYI ++ + +LPHSAGRYAAKRFRKA CPI+ER
Sbjct: 23 AEVGSVKLFNRWSYEDVEIRDISLTDYIQIR--SPVYLPHSAGRYAAKRFRKANCPIIER 80
Query: 100 LTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRA 159
LTNSLMMHGRNN KKLMAVRIV HAFEIIHL+T +NP+QI V AI+N GPREDSTRIG A
Sbjct: 81 LTNSLMMHGRNNGKKLMAVRIVAHAFEIIHLMTDQNPIQIAVDAIVNCGPREDSTRIGSA 140
Query: 160 GTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
GTVRRQAVDVSPLRRVNQAI LL TGAREA+FRN+K+IAEC+A+ELINAAK + N
Sbjct: 141 GTVRRQAVDVSPLRRVNQAIALLTTGAREASFRNVKSIAECLAEELINAAKGSSN 195
>sp|Q54MA6|RS5_DICDI 40S ribosomal protein S5 OS=Dictyostelium discoideum GN=rps5 PE=1
SV=1
Length = 190
Score = 250 bits (639), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/171 (70%), Positives = 141/171 (82%), Gaps = 2/171 (1%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
E+ LFG+WS V D+SLQDYI VK KN F PHSAGRY RFRKAQCPIVERL NS
Sbjct: 4 EVALFGKWSYSGVTCPDISLQDYICVK-KNV-FTPHSAGRYNKVRFRKAQCPIVERLANS 61
Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
+MM GRN KK+MAVRI++ AFEII+LLT +NPLQ+LV A++NSGPREDSTRIG AGTVR
Sbjct: 62 MMMFGRNAGKKVMAVRIIEQAFEIIYLLTDKNPLQVLVEAVMNSGPREDSTRIGSAGTVR 121
Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
RQAVDVSP+RRVN A++LL G R AAFRNI+T+AEC+ADELINA+K + N
Sbjct: 122 RQAVDVSPMRRVNHAVYLLTQGTRAAAFRNIRTVAECLADELINASKGSPN 172
>sp|P26783|RS5_YEAST 40S ribosomal protein S5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS5 PE=1 SV=3
Length = 225
Score = 246 bits (628), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 116/167 (69%), Positives = 140/167 (83%), Gaps = 2/167 (1%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
EIKLF +WS ++V+V D SL DY+ V++ F+ H+AGRYA KRFRKAQCPI+ERLTNS
Sbjct: 39 EIKLFNKWSFEEVEVKDASLVDYVQVRQ--PIFVAHTAGRYANKRFRKAQCPIIERLTNS 96
Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
LMM+GRNN KKL AVRI+KH +II++LT +NP+Q++V AI N+GPRED+TR+G G R
Sbjct: 97 LMMNGRNNGKKLKAVRIIKHTLDIINVLTDQNPIQVVVDAITNTGPREDTTRVGGGGAAR 156
Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAK 210
RQAVDVSPLRRVNQAI LL GAREAAFRNIKTIAE +A+ELINAAK
Sbjct: 157 RQAVDVSPLRRVNQAIALLTIGAREAAFRNIKTIAETLAEELINAAK 203
>sp|Q9P3T6|RS5B_SCHPO 40S ribosomal protein S5-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps5b PE=3 SV=1
Length = 203
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/174 (67%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Query: 41 ELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERL 100
E IKLF ++ + V+V D+SL DYI + N + LPH+AGR+ KRFRKA+C IVERL
Sbjct: 14 ETGHIKLFNKFPFEGVEVKDISLVDYITIG--NGQPLPHTAGRFQTKRFRKARCFIVERL 71
Query: 101 TNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAG 160
TNSLMM+GRNN KKL+A RIVKHAFEII LLT +NPLQ+LV A+ GPREDSTRIG AG
Sbjct: 72 TNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAG 131
Query: 161 TVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
TVRRQAVDVSPLRRVNQA+ L+ GAREAAFRN+K+I+EC+A+E+INAAK + N
Sbjct: 132 TVRRQAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSN 185
>sp|O14277|RS5A_SCHPO 40S ribosomal protein S5-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps5a PE=3 SV=1
Length = 203
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/170 (68%), Positives = 141/170 (82%), Gaps = 2/170 (1%)
Query: 45 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 104
IKLF ++ + V+V D+SL DYI + N + LPH+AGR+ KRFRKA+C IVERLTNSL
Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITIG--NGQPLPHTAGRFQTKRFRKARCFIVERLTNSL 75
Query: 105 MMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRR 164
MM+GRNN KKL+A RIVKHAFEII LLT +NPLQ+LV A+ GPREDSTRIG AGTVRR
Sbjct: 76 MMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRR 135
Query: 165 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
QAVDVSPLRRVNQA+ L+ GAREAAFRN+K+I+EC+A+E+INAAK + N
Sbjct: 136 QAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSN 185
>sp|O24111|RS5_NICPL 40S ribosomal protein S5 (Fragment) OS=Nicotiana plumbaginifolia
GN=RPS5 PE=2 SV=1
Length = 154
Score = 240 bits (613), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 113/136 (83%), Positives = 125/136 (91%)
Query: 79 HSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQ 138
H+AGRY AKRFRKAQCPIVERLTNSLMMHGRNN KKLMAVRIVKHA EIIHLLT NP+Q
Sbjct: 1 HTAGRYQAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQ 60
Query: 139 ILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIA 198
++V A+INSGPRED+TRIG AG VRRQAVD+SPLRRV+QAI+LL TGARE+AFRNIKTIA
Sbjct: 61 VIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVSQAIYLLTTGARESAFRNIKTIA 120
Query: 199 ECVADELINAAKFNQN 214
EC+ADELINAAK + N
Sbjct: 121 ECLADELINAAKGSSN 136
>sp|Q9YAU8|RS7_AERPE 30S ribosomal protein S7 OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps7 PE=3
SV=3
Length = 205
Score = 177 bits (448), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
+I+LFG+WS V+V D SL+ YI +K +LPH+ GR+ +RF KA+ PIVERL N
Sbjct: 20 KIRLFGKWSWVGVEVRDPSLKRYINLK---PVWLPHTGGRHEKRRFGKAEVPIVERLMNK 76
Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
LM GRN KK +A IVK AF+II+ TGENP+Q+LV AI NS PRED+T+I G
Sbjct: 77 LMRPGRNGGKKHLAYNIVKTAFDIIYFETGENPIQVLVKAIENSAPREDTTKITYGGITY 136
Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAK 210
R +VDV+P RRV+QA+ + GAR+ AF N K I EC+A+ELI AA+
Sbjct: 137 RVSVDVAPQRRVDQALKFIADGARQCAFNNPKPIEECLAEELILAAR 183
>sp|O15587|RS5_ENTHI 40S ribosomal protein S5 (Fragment) OS=Entamoeba histolytica PE=2
SV=1
Length = 148
Score = 176 bits (447), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 80/124 (64%), Positives = 102/124 (82%)
Query: 87 KRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIIN 146
K FRK QCPIVERL +M HG+N+ KKL+A+R+V+ +FEIIHLLT +NP+Q+LV AIIN
Sbjct: 3 KPFRKIQCPIVERLVCCMMQHGKNSGKKLLAMRVVEESFEIIHLLTEKNPIQVLVDAIIN 62
Query: 147 SGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 206
+ PREDSTR+G G VR QAVDVSPLRR+N A++LL G R AFRN K++AEC+ADE++
Sbjct: 63 ASPREDSTRVGTGGNVRGQAVDVSPLRRINHALYLLIMGCRCGAFRNSKSLAECLADEIV 122
Query: 207 NAAK 210
NA+K
Sbjct: 123 NASK 126
>sp|Q8TXJ3|RS7_METKA 30S ribosomal protein S7 OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps7 PE=3 SV=1
Length = 197
Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 119/171 (69%), Gaps = 3/171 (1%)
Query: 42 LPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLT 101
L E+K+FG+W +V+V D L+DYI +K +LPH+ GR+A KRF KA+ PIVERL
Sbjct: 10 LYEMKVFGKWDPTEVEVRDPGLKDYICLK---PMYLPHTGGRHAKKRFAKAEVPIVERLI 66
Query: 102 NSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGT 161
N +M +N KK +A IVK AF+IIH TGENP+Q+LV A+ N+ PRE++T I G
Sbjct: 67 NRVMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGI 126
Query: 162 VRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFN 212
+AVD SP RR++ A+ L+ GA++ AFRN K I EC+A+E+I AA+++
Sbjct: 127 SYHEAVDSSPQRRLDIALRLITEGAQQRAFRNPKPIEECLAEEIIAAARYD 177
>sp|Q8SS72|RS5_ENCCU 40S ribosomal protein S5 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=RPS5 PE=1 SV=1
Length = 208
Score = 164 bits (415), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 122/176 (69%), Gaps = 2/176 (1%)
Query: 39 PAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVE 98
P + EI LF ++S ++V+V+++SL+ YI + + +PH+A KA+ PI E
Sbjct: 17 PLGMAEINLFEKYSYEEVKVNNVSLRPYINLSRRG--IVPHAATTITKGTTGKARIPIAE 74
Query: 99 RLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGR 158
R SLM HGRN+ KK +A+ I + A IIH +T +NPLQ+LV AI+NSGPRED+ RIGR
Sbjct: 75 RFVCSLMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGR 134
Query: 159 AGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
AG++RR +VDVSPL+R++ AI L G R A+FRN T+AE +A+ELI A+ +QN
Sbjct: 135 AGSMRRTSVDVSPLKRISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQN 190
>sp|P41206|RS7_DESMO 30S ribosomal protein S7 OS=Desulfurococcus mobilis GN=rps7 PE=3
SV=2
Length = 198
Score = 163 bits (413), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 112/168 (66%), Gaps = 3/168 (1%)
Query: 42 LPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLT 101
+ EIKLF +WS D ++V D SL+ YI +K +LPH+ GR+ +RF K PIVERL
Sbjct: 11 IKEIKLFNKWSYDFIEVRDPSLKKYICLK---PVYLPHTGGRHEHRRFGKTHVPIVERLI 67
Query: 102 NSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGT 161
N +M GRN KK +A IVK AF+IIH+ TGENP+Q+LV AI N+ PRE++TRI G
Sbjct: 68 NKVMRPGRNMGKKHLAYHIVKKAFDIIHIKTGENPIQVLVRAIENAAPREETTRIMYGGI 127
Query: 162 VRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
+VDV+PLRR++ A+ L GAR AF + I E +A+E++ AA
Sbjct: 128 TYHVSVDVAPLRRIDLALRHLTEGARMKAFHSPIPIEEALAEEIVLAA 175
>sp|P35026|RS7_SULSO 30S ribosomal protein S7 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps7 PE=3 SV=3
Length = 193
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 115/166 (69%), Gaps = 4/166 (2%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
+IK+FG+W V++ D SL+ YI++ +LPH+ GR+ +RF KA+ PIVERL N
Sbjct: 9 DIKVFGKWDTK-VEIRDPSLKKYISLM---PVYLPHTGGRHEHRRFGKAKVPIVERLINQ 64
Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
+M GRN KK +A IVK AF+II+L TG+NP+Q+LV AI NS PRE+ TRI G V
Sbjct: 65 IMRPGRNKGKKHLAYNIVKLAFDIIYLKTGQNPIQVLVRAIENSAPREEVTRIMYGGIVY 124
Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
AVDVSP RR++ A+ + TGA++A+F N K I E +A+E+I AA
Sbjct: 125 YVAVDVSPQRRIDLALRHIATGAKDASFNNPKPIEEVLAEEIIAAA 170
>sp|Q8ZYK5|RS7_PYRAE 30S ribosomal protein S7 OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=rps7
PE=3 SV=1
Length = 223
Score = 159 bits (403), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 107/165 (64%), Gaps = 3/165 (1%)
Query: 45 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 104
I LFG+WS +DV V D L+ YI +K LPH+ GRY RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLK---PVILPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 105 MMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRR 164
M GRN KK A IVK AF++I+ TG+NPLQ+ + AIIN+ PRE+ TRI G
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYS 155
Query: 165 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
+VDVSP RR++ A+ + GAR +F N K I EC+ADE+I AA
Sbjct: 156 VSVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADEIIAAA 200
>sp|A1RSA1|RS7_PYRIL 30S ribosomal protein S7 OS=Pyrobaculum islandicum (strain DSM 4184
/ JCM 9189) GN=rps7 PE=3 SV=1
Length = 224
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Query: 47 LFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMM 106
LFG+WS ++V V D L+ YI +K LPH+ GRY RF KA+ PIVERL N +M
Sbjct: 42 LFGKWSFENVVVKDPGLRRYICLK---PVLLPHTEGRYQKHRFGKARIPIVERLINLMMR 98
Query: 107 HGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQA 166
GRN KK A IVK AF+II+ TG+NP+Q+LV AIIN PRE+ TRI G +
Sbjct: 99 PGRNTGKKHKAYNIVKRAFDIIYYKTGQNPIQVLVDAIINVAPREEVTRIIMGGIAYTVS 158
Query: 167 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
VDVSP RR++ A+ + GAR +F N K I EC+ADE+I AA
Sbjct: 159 VDVSPQRRLDLALRWITEGARTCSFNNPKPIEECLADEIIAAA 201
>sp|B8D6G4|RS7_DESK1 30S ribosomal protein S7 OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=rps7 PE=3 SV=1
Length = 198
Score = 157 bits (398), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 103/150 (68%), Gaps = 3/150 (2%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
EIKLF +WS D ++V D SL+ YI +K +LPHS GR+ KRF KA PIVERL N+
Sbjct: 13 EIKLFNKWSYDFIEVRDPSLKKYICLK---PVYLPHSGGRHEHKRFGKALVPIVERLINN 69
Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
+M GRN KK +A IVK +FE+I+L TGENPLQ+LV AI N+ PRE++TRI G
Sbjct: 70 VMRPGRNMGKKHLAYNIVKKSFELIYLKTGENPLQVLVRAIENAAPREETTRIMYGGITY 129
Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRN 193
+VD++PLRR++ A+ L GAR AF N
Sbjct: 130 HVSVDIAPLRRIDLALRHLTEGARLKAFHN 159
>sp|Q6LXI3|RS7_METMP 30S ribosomal protein S7 OS=Methanococcus maripaludis (strain S2 /
LL) GN=rps7 PE=3 SV=1
Length = 188
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 109/167 (65%), Gaps = 3/167 (1%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
EIKLFG+W + V V D SL+ YI+V +PH+AGR + K F K++ IVERL N
Sbjct: 2 EIKLFGKWDSETVAVKDPSLKSYISVA---PVLVPHTAGRNSKKSFDKSKMNIVERLANK 58
Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
LM + N KK + IV+ A II T ENP+Q+LV A+ NSGPRE++TRI G
Sbjct: 59 LMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAF 118
Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAK 210
Q+VDVSP RR++ A + GA E+A +N KT+A+C+ADELI A+K
Sbjct: 119 LQSVDVSPSRRLDTAFRNIALGASESAHKNKKTVAQCLADELIFASK 165
>sp|B1YC67|RS7_PYRNV 30S ribosomal protein S7 OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rps7 PE=3 SV=1
Length = 224
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Query: 47 LFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMM 106
LFG+WS ++V V D L+ YI +K LPH+ GRY RF KA+ PIVERL N +M
Sbjct: 42 LFGKWSFENVVVRDPGLRRYICLK---PVVLPHTEGRYQNYRFGKARIPIVERLINLMMR 98
Query: 107 HGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQA 166
GRN KK A IVK AF+I++ TG+NP+Q+ + AI+N+ PRE+ TRI G +
Sbjct: 99 PGRNAGKKHKAYNIVKRAFDIVYYKTGQNPIQVFIDAIVNTAPREEITRIIMGGIAYSVS 158
Query: 167 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
VDVSP RR++ A+ + GAR +F N K I EC+ADEL+ AA
Sbjct: 159 VDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADELVAAA 201
>sp|A4FWF1|RS7_METM5 30S ribosomal protein S7 OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rps7 PE=3 SV=1
Length = 188
Score = 154 bits (388), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 108/167 (64%), Gaps = 3/167 (1%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
EIKLFG+W + V V D SL+ YI+V +PH+AGR K F KA+ IVERL N
Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYISVA---PVLVPHTAGRNTKKSFDKAKMNIVERLANK 58
Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
LM + N KK + IV+ A II T ENP+Q+LV A+ NSGPRE++TRI G
Sbjct: 59 LMANQNNTGKKHETLAIVEEALAIIENRTKENPVQVLVDALENSGPREETTRISYGGIAF 118
Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAK 210
Q+VDVSP RR++ A + GA ++A +N KT+A+C+ADE+I A+K
Sbjct: 119 LQSVDVSPSRRLDTAFRNIALGASDSAHKNKKTVAQCLADEIIFASK 165
>sp|A9A9U5|RS7_METM6 30S ribosomal protein S7 OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=rps7 PE=3 SV=1
Length = 188
Score = 154 bits (388), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 109/167 (65%), Gaps = 3/167 (1%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
EIKLFG+W + V V D SL+ Y++V +PH+AGR + K F K++ IVERL N
Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYVSV---TPVLVPHTAGRNSKKSFDKSKMNIVERLANK 58
Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
LM + N KK + IV+ A II T ENP+Q+LV A+ NSGPRE++TRI G
Sbjct: 59 LMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAF 118
Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAK 210
Q+VDVSP RR++ A + GA ++A +N KT+A+C+ADE+I A+K
Sbjct: 119 LQSVDVSPSRRLDTAFRNIALGASQSAHKNKKTVAQCLADEIIFASK 165
>sp|A6VGV4|RS7_METM7 30S ribosomal protein S7 OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=rps7 PE=3 SV=1
Length = 188
Score = 153 bits (387), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 109/167 (65%), Gaps = 3/167 (1%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
EIKLFG+W + V V D SL+ Y++V +PH+AGR + K F K++ IVERL N
Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYVSVA---PVLVPHTAGRNSKKSFDKSKMNIVERLANK 58
Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
LM + N KK + IV+ A II T ENP+Q+LV A+ NSGPRE++TRI G
Sbjct: 59 LMANQENTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAF 118
Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAK 210
Q+VDVSP RR++ A + GA ++A +N KT+A+C+ADE+I A+K
Sbjct: 119 LQSVDVSPSRRLDTAFRNIALGASQSAHKNKKTVAQCLADEIIFASK 165
>sp|O27130|RS7_METTH 30S ribosomal protein S7 OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rps7 PE=3 SV=1
Length = 186
Score = 153 bits (386), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 114/166 (68%), Gaps = 3/166 (1%)
Query: 47 LFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMM 106
+F +W D+V+V DM L YI + ++ +PH+ GR+ ++F K++ IVERL N +M
Sbjct: 4 VFDKWELDEVKVEDMGLAKYICL---DSILVPHTMGRHVKRQFAKSKVSIVERLINKVMR 60
Query: 107 HGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQA 166
RN+ KK A +IV+ AFEII+ T ENP+QILV A+ N+ PRE++TRI G + A
Sbjct: 61 TERNSGKKNKAYKIVQEAFEIINRRTKENPVQILVKAVENTSPREETTRIKYGGIGYQVA 120
Query: 167 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFN 212
VD+SP RRV+ ++ + GA +AAF+N K+I EC+A+E++ AA+++
Sbjct: 121 VDISPQRRVDLSLGFITRGAMQAAFKNKKSIEECLANEIMLAAEYD 166
>sp|O28386|RS7_ARCFU 30S ribosomal protein S7 OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rps7 PE=3 SV=1
Length = 194
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 116/172 (67%), Gaps = 4/172 (2%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
E+ +FG++ +VQ+SD +L+ YI ++ K++PH+ GR+A F K + IVERL N
Sbjct: 9 ELLVFGKYDPSEVQISDPALESYICLE---PKYVPHNHGRHANVPFAKQKVFIVERLINK 65
Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
+M G N KK++A IVK AFEII T +NP+Q+LV AIIN+GPRE+ R+ G
Sbjct: 66 VMRKGHNTGKKILAYNIVKEAFEIIEKKTKKNPIQVLVDAIINAGPREEVVRLKYGGIAV 125
Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQNR 215
+AVD S RRV+ A+ + GAR AAF++ ++IA+C+ADE+I AA N++R
Sbjct: 126 PKAVDTSSSRRVDIALRNIAEGARRAAFKSKRSIAQCLADEIIAAAN-NESR 176
>sp|A0B563|RS7_METTP 30S ribosomal protein S7 OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rps7 PE=3 SV=1
Length = 185
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 45 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 104
+K+FG+W +V++ D+S++ YI +K + + H+ GR+A ++F+K++ +VERL N +
Sbjct: 1 MKVFGKWDASEVEIPDLSVKGYINLK---PRIVLHTGGRHAKQQFKKSELHVVERLINKM 57
Query: 105 MMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRR 164
M +N +K +A RIV+ AF+IIH T ENPL +LV AI N+GPRE+ R+ G
Sbjct: 58 MRKEKNTGQKQIAYRIVEEAFDIIHSRTKENPLSVLVRAISNAGPREEVVRLKYGGITVP 117
Query: 165 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFN 212
+AVD +P RRV+ A+ L+ GA +A+F++ ++I C+ADE+I AA ++
Sbjct: 118 KAVDTAPQRRVDTALMLIAKGAWQASFKSRRSIQNCLADEIIAAANYD 165
>sp|A8MBL5|RS7_CALMQ 30S ribosomal protein S7 OS=Caldivirga maquilingensis (strain ATCC
700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=rps7 PE=3
SV=2
Length = 224
Score = 150 bits (378), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 107/165 (64%), Gaps = 3/165 (1%)
Query: 45 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 104
I LFG+W+ +DV + D L+ Y+ +K LPH+ G+Y ++F KA PI+ER+ N L
Sbjct: 40 ILLFGKWNVNDVVIRDPGLRRYMCLK---PMLLPHTEGKYQNRKFGKAMIPIIERMMNQL 96
Query: 105 MMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRR 164
M GRN KK A +I+K AF+II++ TG+NP+Q+ V A++N PRE+ TR+ G
Sbjct: 97 MKPGRNAGKKQKAYKILKTAFDIIYVATGKNPVQVFVDAVVNVAPREEITRVIYGGIAYP 156
Query: 165 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
+VDV P RR++ AI + GAR +F N + I EC+A+E+I AA
Sbjct: 157 VSVDVGPTRRLDLAIRWIAEGARACSFNNPRPIEECLANEIIAAA 201
>sp|Q976B0|RS7_SULTO 30S ribosomal protein S7 OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=rps7 PE=3 SV=1
Length = 194
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 104/152 (68%), Gaps = 4/152 (2%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
++K+FG+W V++ D SL+ YI + +LPH+ GR+ +RF KA+ PIVERL N+
Sbjct: 10 DLKVFGKWDTK-VEIRDPSLKKYIGLM---PVYLPHTGGRHEHRRFGKAKLPIVERLINN 65
Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
+M GRN KK++A IVK AF+II L TG+NP+Q+LV AI NS PRE+ TRI G V
Sbjct: 66 VMRPGRNKGKKMLAYNIVKTAFDIIALKTGQNPIQVLVKAIENSAPREEVTRIMYGGIVY 125
Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 195
AVDV+P RRV+ A+ L GA+EA+F N K
Sbjct: 126 YVAVDVAPQRRVDLALRHLVMGAKEASFNNPK 157
>sp|P54063|RS7_METJA 30S ribosomal protein S7 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rps7 PE=3 SV=1
Length = 191
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 104/155 (67%), Gaps = 3/155 (1%)
Query: 41 ELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERL 100
EL EIK+FGRWS DV V D L++YI + ++PH+AGRY ++F KA+ IVERL
Sbjct: 2 ELDEIKVFGRWSTKDVVVKDPGLRNYINL---TPIYVPHTAGRYTKRQFEKAKMNIVERL 58
Query: 101 TNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAG 160
N +M N KKL A++IV++AFEII T +NP+Q+LV AI N+GPRED+TRI G
Sbjct: 59 VNKVMRREENTGKKLKALKIVENAFEIIEKRTKQNPIQVLVDAIENAGPREDTTRISYGG 118
Query: 161 TVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 195
V Q+VD S LRR++ A+ + GA AA ++ K
Sbjct: 119 IVYLQSVDCSSLRRIDVALRNIALGAYMAAHKSKK 153
>sp|P0CX01|RS7_HALSA 30S ribosomal protein S7 OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rps7 PE=3 SV=1
Length = 210
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 106/167 (63%), Gaps = 5/167 (2%)
Query: 46 KLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLM 105
KLFG+W ++ D S + Y+AV + H+ GR+A K+F+K++ IVERL N LM
Sbjct: 29 KLFGKWDVAEIHYEDPSTRRYLAVTP-----VAHTMGRHAQKQFKKSEISIVERLANRLM 83
Query: 106 MHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQ 165
G N KK A++IV+ AF+I+H T ENP+Q+LV+A+ N+ PRE++ R+ G Q
Sbjct: 84 KTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQ 143
Query: 166 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFN 212
AVD +P RRV+QA+ L GA A+F+ AE +A++L AA +N
Sbjct: 144 AVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALANQLAGAADYN 190
>sp|B0R8D0|RS7_HALS3 30S ribosomal protein S7 OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rps7 PE=3 SV=1
Length = 210
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 106/167 (63%), Gaps = 5/167 (2%)
Query: 46 KLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLM 105
KLFG+W ++ D S + Y+AV + H+ GR+A K+F+K++ IVERL N LM
Sbjct: 29 KLFGKWDVAEIHYEDPSTRRYLAVTP-----VAHTMGRHAQKQFKKSEISIVERLANRLM 83
Query: 106 MHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQ 165
G N KK A++IV+ AF+I+H T ENP+Q+LV+A+ N+ PRE++ R+ G Q
Sbjct: 84 KTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQ 143
Query: 166 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFN 212
AVD +P RRV+QA+ L GA A+F+ AE +A++L AA +N
Sbjct: 144 AVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALANQLAGAADYN 190
>sp|A6UV45|RS7_META3 30S ribosomal protein S7 OS=Methanococcus aeolicus (strain Nankai-3
/ ATCC BAA-1280) GN=rps7 PE=3 SV=1
Length = 188
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 112/172 (65%), Gaps = 3/172 (1%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
EIKLF +W ++ V D SL+ YI ++ F+PH++GR + + F KA+ IVERL N+
Sbjct: 2 EIKLFNKWDTTEIVVKDPSLRHYINLE---PIFVPHTSGRNSGRMFEKAKMNIVERLVNN 58
Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
LM +N +K + + IV+ AFEII T ENP+++LV A+ N GPRE++TRI G
Sbjct: 59 LMRAEQNTGQKQVTLSIVEEAFEIIEKRTNENPVKVLVEALENGGPREETTRISYGGIAF 118
Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQNR 215
Q+VDVSP RR++ A+ + G +A +N K+ A+C+ADE++ A+K + R
Sbjct: 119 LQSVDVSPSRRLDTALRNIAIGTLNSAHKNKKSAAQCLADEIMFASKADMQR 170
>sp|A0RUR1|RS7_CENSY 30S ribosomal protein S7 OS=Cenarchaeum symbiosum (strain A)
GN=rps7 PE=3 SV=1
Length = 199
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 111/178 (62%), Gaps = 11/178 (6%)
Query: 40 AELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVER 99
AE + LF +W D++V D L+ I++++ LP++ GR A KRF KA IVER
Sbjct: 2 AETQNLLLFRKWDLSDIEVVDPGLKTAISLRKMT---LPYTYGRSALKRFNKADANIVER 58
Query: 100 LTNSLMMHGRNNAK--------KLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPRE 151
L N +M G+ AK K+ ++ VK AFEII+L TG NP+++LV A+ NS P E
Sbjct: 59 LANKMMHFGKKYAKNTGRMAGKKMGSINTVKTAFEIINLKTGRNPVEVLVRAVENSAPNE 118
Query: 152 DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
D+TRI GTV +VDVSPLRRV+ A+ + G +EAAFR K++ E +A+ LI AA
Sbjct: 119 DTTRIVYGGTVYHVSVDVSPLRRVDLALRFIADGVKEAAFRKPKSLEEFLAEHLILAA 176
>sp|P17198|RS7_SULAC 30S ribosomal protein S7 OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=rps7 PE=3 SV=1
Length = 195
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 103/151 (68%), Gaps = 4/151 (2%)
Query: 45 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 104
+K+FG+W V+V D SL+ YI + + +LPH+ GR+ +RF K++ PIVERL N+L
Sbjct: 12 VKVFGKWDTK-VEVRDPSLKKYIDLM---SIYLPHTGGRHEHRRFGKSRIPIVERLINNL 67
Query: 105 MMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRR 164
M GRN KK++A IVK F+II + TG+NP+Q+LV AI N+ PRE+ TRI G V
Sbjct: 68 MRPGRNKGKKMLAYNIVKTTFDIIAVKTGQNPIQVLVRAIENAAPREEVTRIMYGGIVYY 127
Query: 165 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 195
AVDV+P RRV+ A+ L TGA EA+F N K
Sbjct: 128 VAVDVAPQRRVDLALRHLVTGASEASFNNPK 158
>sp|P14037|RS7_METVS 30S ribosomal protein S7 OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rps7 PE=3 SV=2
Length = 194
Score = 144 bits (363), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 109/176 (61%), Gaps = 3/176 (1%)
Query: 40 AELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVER 99
E EIKLFG+W V V D SL+ +I++ N +PH+AGR + K F K + +VER
Sbjct: 4 GEKLEIKLFGKWDSTSVTVKDPSLKSHISL---NPVLIPHTAGRNSKKMFDKNKMHVVER 60
Query: 100 LTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRA 159
L N LM N KK + I++ A I+ T ENP+Q++V A+ NSGPRE++TRI
Sbjct: 61 LANKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYG 120
Query: 160 GTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQNR 215
G Q+VDVSP RR++ A + GA + A ++ K+IA+C+ADEL+ A+K + +
Sbjct: 121 GIAFLQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASKADMQK 176
>sp|Q2NEK9|RS7_METST 30S ribosomal protein S7 OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rps7 PE=3 SV=1
Length = 187
Score = 144 bits (362), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 109/165 (66%), Gaps = 3/165 (1%)
Query: 45 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 104
KLF +W +V V DM LQ+Y+ + E +PH+ GR+ ++F K++ IVERL N +
Sbjct: 3 FKLFDKWDVTEVTVEDMGLQNYVCLDEI---VVPHTMGRHVKRQFAKSKVSIVERLMNKI 59
Query: 105 MMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRR 164
M RN+ KK A IV+ A EII+ T +NP+Q+LV A+ N+ PRE++TRI G +
Sbjct: 60 MRTERNSGKKNKAYSIVEDALEIINNKTKQNPVQVLVKAVENTAPREETTRIKYGGIGYQ 119
Query: 165 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
AVD++P RRV+ ++ + GA ++AF+N K+ A+C+ADE++ A+
Sbjct: 120 IAVDIAPQRRVDLSLGFITKGAMQSAFKNKKSAAQCLADEILLAS 164
>sp|Q8TRC2|RS7_METAC 30S ribosomal protein S7 OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=rps7 PE=3 SV=1
Length = 189
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 109/164 (66%), Gaps = 3/164 (1%)
Query: 46 KLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLM 105
K+FG+W +V+V D+ ++ Y+++ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSL---TPVIVPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 106 MHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQ 165
N KK + +R V+ AF+I++ T +NP+Q+LV AI N+GPRE+ R+ G +
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPK 122
Query: 166 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
AVD +P RRV+ A+ + G AAF++ +++AEC+A ELI AA
Sbjct: 123 AVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAA 166
>sp|Q8PUR6|RS7_METMA 30S ribosomal protein S7 OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps7 PE=3 SV=1
Length = 189
Score = 141 bits (355), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 109/164 (66%), Gaps = 3/164 (1%)
Query: 46 KLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLM 105
K+FG+W +V+V D+ ++ Y+++ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVRDLGIKRYVSLA---PVIVPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 106 MHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQ 165
N KK + +R V+ AF+II+ T +NP+QILV AI N+GPRE+ R+ G +
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISVPK 122
Query: 166 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
AVD +P RRV+ A+ + G AAF++ +++AEC+A ELI AA
Sbjct: 123 AVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAA 166
>sp|Q464Z2|RS7_METBF 30S ribosomal protein S7 OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=rps7 PE=3 SV=1
Length = 185
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 108/165 (65%), Gaps = 3/165 (1%)
Query: 45 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 104
+K+FG+W +V+V D+ ++ Y+++ +PHS+G++A ++F K++ IVERL N+L
Sbjct: 1 MKIFGKWDPTEVEVRDLGIKRYVSL---TPVIVPHSSGKHARQQFNKSEISIVERLANNL 57
Query: 105 MMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRR 164
M N KK +R V+ AF+I+ T +NP+Q+LV AI N+GPRE+ R+ G
Sbjct: 58 MRTEINTGKKQKTLRAVEEAFDIVSKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVP 117
Query: 165 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
+AVD +P RRV+ A+ + G AAF++ +++AEC+A ELI AA
Sbjct: 118 KAVDTAPQRRVDTALRYISMGTNNAAFKSKRSVAECLATELIGAA 162
>sp|Q8U0M8|RS7_PYRFU 30S ribosomal protein S7 OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rps7 PE=1 SV=1
Length = 215
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 110/182 (60%), Gaps = 19/182 (10%)
Query: 44 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
EIK+ GRWS +DV+V D SL+ YI ++ + LPH+ GR+A K F KA IVERL N
Sbjct: 14 EIKVMGRWSTEDVEVRDPSLKPYINLE---PRLLPHTHGRHAKKHFGKANVHIVERLINK 70
Query: 104 LMMHGRN----------------NAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINS 147
+M G + N+KK+ A +VK AF+II TG+NP+Q+LV AI N+
Sbjct: 71 IMRSGGSHYKVAGHFMRREHRSLNSKKVKAYEVVKEAFKIIEQRTGKNPIQVLVWAIENA 130
Query: 148 GPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELIN 207
PRED+T + G AVD+SP+RR++ A+ + GA +RN + AE +A+E+I
Sbjct: 131 APREDTTSVMFGGIRYHVAVDISPMRRLDVALRNIALGASAKCYRNKMSFAEALAEEIIL 190
Query: 208 AA 209
AA
Sbjct: 191 AA 192
>sp|O93631|RS7_METBU 30S ribosomal protein S7 OS=Methanococcoides burtonii (strain DSM
6242) GN=rps7 PE=3 SV=2
Length = 186
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 111/164 (67%), Gaps = 3/164 (1%)
Query: 46 KLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLM 105
KLFG+W +V+V+D ++ Y+ + + +PH++G++A ++F K+ IVERL N++M
Sbjct: 3 KLFGKWDLTEVEVADAGIKRYVNL---DPVIVPHTSGKHARQQFNKSDITIVERLVNNVM 59
Query: 106 MHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQ 165
+ +N KK +A+RIV AF+I++ T +NP+Q+LV A+ N+GPRE+ R+ G +
Sbjct: 60 RNAQNTGKKQIALRIVDEAFDIVNSKTKKNPVQVLVEAVSNAGPREEVVRLKYGGISVPK 119
Query: 166 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
AVD +P RRV+ A+ + G+ + AF++ ++ AEC+A ELI A+
Sbjct: 120 AVDTAPQRRVDHALRNISIGSNQTAFKSKRSAAECLASELIAAS 163
>sp|P32552|RS7_HALMA 30S ribosomal protein S7 OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps7 PE=1
SV=2
Length = 206
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 101/164 (61%), Gaps = 5/164 (3%)
Query: 46 KLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLM 105
KLFG W D++ SD S + YI V + H+ GR+A K+F+K++ IVERL N LM
Sbjct: 25 KLFGEWDITDIEYSDPSTERYITVTP-----IAHTMGRHADKQFKKSEISIVERLINRLM 79
Query: 106 MHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQ 165
N KK +A IV AFE++H T ENP+Q+LV+A+ NS PRE++ R+ G +
Sbjct: 80 QTDENTGKKQLATSIVTEAFELVHERTDENPIQVLVSAVENSAPREETVRLKYGGISVPK 139
Query: 166 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 209
AVDV+P RRV+QA+ L G +F+ T AE +A +LI AA
Sbjct: 140 AVDVAPQRRVDQALKFLAEGVYGGSFKTTTTAAEALAQQLIGAA 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,522,138
Number of Sequences: 539616
Number of extensions: 2784740
Number of successful extensions: 7093
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 263
Number of HSP's that attempted gapping in prelim test: 6777
Number of HSP's gapped (non-prelim): 510
length of query: 215
length of database: 191,569,459
effective HSP length: 113
effective length of query: 102
effective length of database: 130,592,851
effective search space: 13320470802
effective search space used: 13320470802
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)