BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10067
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24186|RS5A_DROME 40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=2
SV=1
Length = 228
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/117 (74%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
Query: 8 DPAYPSESTGGPVGL-SSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFL 66
+PA P E+ L +++ + ELPEIKLFGRWSCDDV V+D+SLQDYI+VKEK A++L
Sbjct: 14 EPAAPMEAEVAETILETNVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYL 73
Query: 67 PHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
PHSAGRYAAKRFRKAQCPIVERLT SLMM GRNN KKLMA RIVKH+FEIIHLLTGE
Sbjct: 74 PHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGE 130
>sp|P46782|RS5_HUMAN 40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4
Length = 204
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/100 (86%), Positives = 93/100 (93%), Gaps = 2/100 (2%)
Query: 26 AAPA--ELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQC 83
AAPA E P+IKLFG+WS DDVQ++D+SLQDYIAVKEK AK+LPHSAGRYAAKRFRKAQC
Sbjct: 7 AAPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQC 66
Query: 84 PIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
PIVERLTNS+MMHGRNN KKLM VRIVKHAFEIIHLLTGE
Sbjct: 67 PIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
>sp|Q5E988|RS5_BOVIN 40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3
Length = 204
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/100 (86%), Positives = 93/100 (93%), Gaps = 2/100 (2%)
Query: 26 AAPA--ELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQC 83
AAPA E P+IKLFG+WS DDVQ++D+SLQDYIAVKEK AK+LPHSAGRYAAKRFRKAQC
Sbjct: 7 AAPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQC 66
Query: 84 PIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
PIVERLTNS+MMHGRNN KKLM VRIVKHAFEIIHLLTGE
Sbjct: 67 PIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
>sp|P97461|RS5_MOUSE 40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3
Length = 204
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 84/97 (86%), Positives = 91/97 (93%)
Query: 27 APAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIV 86
A AE P+IKLFG+WS DDVQ++D+SLQDYIAVKEK AK+LPHSAGRYAAKRFRKAQCPIV
Sbjct: 10 AVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIV 69
Query: 87 ERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
ERLTNS+MMHGRNN KKLM VRIVKHAFEIIHLLTGE
Sbjct: 70 ERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
>sp|P24050|RS5_RAT 40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=1 SV=3
Length = 204
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/101 (81%), Positives = 91/101 (90%)
Query: 23 SSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQ 82
++ A AE P+IKLFG+WS DDVQ++D+SLQDYIAVKEK AK+LPHSAGRYAA FRKAQ
Sbjct: 6 TATPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANGFRKAQ 65
Query: 83 CPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
CPIVERLTNS+MMHGRNN KKLM VRIVKHAFEIIHLLTGE
Sbjct: 66 CPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
>sp|Q9VFE4|RS5B_DROME 40S ribosomal protein S5b OS=Drosophila melanogaster GN=RpS5b PE=2
SV=1
Length = 230
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 77/94 (81%), Positives = 86/94 (91%)
Query: 30 ELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERL 89
E PEIKLFGRW+CDD+ +SD+SLQDYIAVKEK A++LPHSAGRYAAKRFRKAQCPIVERL
Sbjct: 39 EWPEIKLFGRWACDDISISDISLQDYIAVKEKFARYLPHSAGRYAAKRFRKAQCPIVERL 98
Query: 90 TNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
T+ LMM GR+N KKL+A RIVKHAFEIIHLLT E
Sbjct: 99 TSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSE 132
>sp|P49041|RS5_CAEEL 40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=3
SV=1
Length = 210
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/124 (64%), Positives = 92/124 (74%), Gaps = 13/124 (10%)
Query: 1 MAEDWDADPAYPSESTGGPVGLSSIAAPA-ELPEIKLFGRWSCDDVQVSDMSLQDYIAVK 59
MA++W G + + AAPA E PE+ LFG+WS V VSD+SL DYI VK
Sbjct: 1 MADNW------------GSENVVADAAPATEAPEVALFGKWSLQSVNVSDISLVDYIPVK 48
Query: 60 EKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHL 119
EK+AK+LPHSAGR+ +RFRKA CPIVERL NSLMMHGRNN KKLM VRIVKHAFEII+L
Sbjct: 49 EKSAKYLPHSAGRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYL 108
Query: 120 LTGE 123
LTGE
Sbjct: 109 LTGE 112
>sp|Q08364|RS5_PODCA 40S ribosomal protein S5 OS=Podocoryne carnea GN=RPS5 PE=2 SV=1
Length = 210
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 91/123 (73%), Gaps = 11/123 (8%)
Query: 1 MAEDWDADPAYPSESTGGPVGLSSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKE 60
M E W P E+ P + E+ +IKLFG+W + + +SD+SL DYIAVK+
Sbjct: 1 MEESW----GEPGETVEEPTSI-------EVQDIKLFGKWPLEGLNISDISLTDYIAVKD 49
Query: 61 KNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLL 120
+A +LPH+A RYA KRFRKAQCPIVERLTNSLMMHGRNN KKLMAVRIV+H+FEI+HLL
Sbjct: 50 NHAVYLPHTAARYAVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVRHSFEIMHLL 109
Query: 121 TGE 123
TGE
Sbjct: 110 TGE 112
>sp|Q9ZUT9|RS51_ARATH 40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1
SV=1
Length = 207
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVK-EKNAKFLPHSAGRYAAKRFRKAQCPIVERLTN 91
E+KLF RWS DDV V+D+SL DYI V+ K+A F+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 18 EVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 77
Query: 92 SLMMHGRNNAKKLMAVRIVKHAFEIIHLLT 121
SLMMHGRNN KKLMAVRIVKHA EIIHLL+
Sbjct: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLS 107
>sp|O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2
SV=1
Length = 197
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAV-KEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTN 91
E+KLF RWS DDVQ+SD+SL DYI V K+A ++PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 92 SLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
SLMMHGRNN KKLMAVRI+KHA EIIHLLT +
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQ 99
>sp|P51427|RS52_ARATH 40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1
SV=2
Length = 207
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/90 (76%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKE-KNAKFLPHSAGRYAAKRFRKAQCPIVERLTN 91
E+KLF RW+ DDV V+D+SL DYI V+ K+A F+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 18 EVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 77
Query: 92 SLMMHGRNNAKKLMAVRIVKHAFEIIHLLT 121
SLMMHGRNN KKLMAVRIVKHA EIIHLL+
Sbjct: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLS 107
>sp|Q7RVI1|RS5_NEUCR 40S ribosomal protein S5 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rps-5
PE=3 SV=2
Length = 213
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 80/95 (84%), Gaps = 2/95 (2%)
Query: 29 AELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVER 88
AE+ +KLF RWS +DV++ D+SL DYI ++ + +LPHSAGRYAAKRFRKA CPI+ER
Sbjct: 23 AEVGSVKLFNRWSYEDVEIRDISLTDYIQIR--SPVYLPHSAGRYAAKRFRKANCPIIER 80
Query: 89 LTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
LTNSLMMHGRNN KKLMAVRIV HAFEIIHL+T +
Sbjct: 81 LTNSLMMHGRNNGKKLMAVRIVAHAFEIIHLMTDQ 115
>sp|P26783|RS5_YEAST 40S ribosomal protein S5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS5 PE=1 SV=3
Length = 225
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 74/91 (81%), Gaps = 2/91 (2%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
EIKLF +WS ++V+V D SL DY+ V++ F+ H+AGRYA KRFRKAQCPI+ERLTNS
Sbjct: 39 EIKLFNKWSFEEVEVKDASLVDYVQVRQ--PIFVAHTAGRYANKRFRKAQCPIIERLTNS 96
Query: 93 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
LMM+GRNN KKL AVRI+KH +II++LT +
Sbjct: 97 LMMNGRNNGKKLKAVRIIKHTLDIINVLTDQ 127
>sp|Q54MA6|RS5_DICDI 40S ribosomal protein S5 OS=Dictyostelium discoideum GN=rps5 PE=1
SV=1
Length = 190
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 69/89 (77%), Gaps = 2/89 (2%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
E+ LFG+WS V D+SLQDYI VK KN F PHSAGRY RFRKAQCPIVERL NS
Sbjct: 4 EVALFGKWSYSGVTCPDISLQDYICVK-KNV-FTPHSAGRYNKVRFRKAQCPIVERLANS 61
Query: 93 LMMHGRNNAKKLMAVRIVKHAFEIIHLLT 121
+MM GRN KK+MAVRI++ AFEII+LLT
Sbjct: 62 MMMFGRNAGKKVMAVRIIEQAFEIIYLLT 90
>sp|Q9P3T6|RS5B_SCHPO 40S ribosomal protein S5-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps5b PE=3 SV=1
Length = 203
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 72/94 (76%), Gaps = 2/94 (2%)
Query: 30 ELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERL 89
E IKLF ++ + V+V D+SL DYI + N + LPH+AGR+ KRFRKA+C IVERL
Sbjct: 14 ETGHIKLFNKFPFEGVEVKDISLVDYITIG--NGQPLPHTAGRFQTKRFRKARCFIVERL 71
Query: 90 TNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
TNSLMM+GRNN KKL+A RIVKHAFEII LLT +
Sbjct: 72 TNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQ 105
>sp|O14277|RS5A_SCHPO 40S ribosomal protein S5-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps5a PE=3 SV=1
Length = 203
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Query: 34 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 93
IKLF ++ + V+V D+SL DYI + N + LPH+AGR+ KRFRKA+C IVERLTNSL
Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITIG--NGQPLPHTAGRFQTKRFRKARCFIVERLTNSL 75
Query: 94 MMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
MM+GRNN KKL+A RIVKHAFEII LLT +
Sbjct: 76 MMNGRNNGKKLLATRIVKHAFEIIALLTDQ 105
>sp|O24111|RS5_NICPL 40S ribosomal protein S5 (Fragment) OS=Nicotiana plumbaginifolia
GN=RPS5 PE=2 SV=1
Length = 154
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/54 (92%), Positives = 51/54 (94%)
Query: 68 HSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLT 121
H+AGRY AKRFRKAQCPIVERLTNSLMMHGRNN KKLMAVRIVKHA EIIHLLT
Sbjct: 1 HTAGRYQAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLT 54
>sp|B8D6G4|RS7_DESK1 30S ribosomal protein S7 OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=rps7 PE=3 SV=1
Length = 198
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
EIKLF +WS D ++V D SL+ YI +K +LPHS GR+ KRF KA PIVERL N+
Sbjct: 13 EIKLFNKWSYDFIEVRDPSLKKYICLK---PVYLPHSGGRHEHKRFGKALVPIVERLINN 69
Query: 93 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
+M GRN KK +A IVK +FE+I+L TGE
Sbjct: 70 VMRPGRNMGKKHLAYNIVKKSFELIYLKTGE 100
>sp|P41206|RS7_DESMO 30S ribosomal protein S7 OS=Desulfurococcus mobilis GN=rps7 PE=3
SV=2
Length = 198
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Query: 31 LPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLT 90
+ EIKLF +WS D ++V D SL+ YI +K +LPH+ GR+ +RF K PIVERL
Sbjct: 11 IKEIKLFNKWSYDFIEVRDPSLKKYICLK---PVYLPHTGGRHEHRRFGKTHVPIVERLI 67
Query: 91 NSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
N +M GRN KK +A IVK AF+IIH+ TGE
Sbjct: 68 NKVMRPGRNMGKKHLAYHIVKKAFDIIHIKTGE 100
>sp|Q8TXJ3|RS7_METKA 30S ribosomal protein S7 OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps7 PE=3 SV=1
Length = 197
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 31 LPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLT 90
L E+K+FG+W +V+V D L+DYI +K +LPH+ GR+A KRF KA+ PIVERL
Sbjct: 10 LYEMKVFGKWDPTEVEVRDPGLKDYICLK---PMYLPHTGGRHAKKRFAKAEVPIVERLI 66
Query: 91 NSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
N +M +N KK +A IVK AF+IIH TGE
Sbjct: 67 NRVMRTEKNTGKKHLAYNIVKRAFDIIHERTGE 99
>sp|Q9YAU8|RS7_AERPE 30S ribosomal protein S7 OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps7 PE=3
SV=3
Length = 205
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
+I+LFG+WS V+V D SL+ YI +K +LPH+ GR+ +RF KA+ PIVERL N
Sbjct: 20 KIRLFGKWSWVGVEVRDPSLKRYINLK---PVWLPHTGGRHEKRRFGKAEVPIVERLMNK 76
Query: 93 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
LM GRN KK +A IVK AF+II+ TGE
Sbjct: 77 LMRPGRNGGKKHLAYNIVKTAFDIIYFETGE 107
>sp|P54063|RS7_METJA 30S ribosomal protein S7 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rps7 PE=3 SV=1
Length = 191
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 30 ELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERL 89
EL EIK+FGRWS DV V D L++YI + ++PH+AGRY ++F KA+ IVERL
Sbjct: 2 ELDEIKVFGRWSTKDVVVKDPGLRNYINL---TPIYVPHTAGRYTKRQFEKAKMNIVERL 58
Query: 90 TNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
N +M N KKL A++IV++AFEII T +
Sbjct: 59 VNKVMRREENTGKKLKALKIVENAFEIIEKRTKQ 92
>sp|B1L735|RS7_KORCO 30S ribosomal protein S7 OS=Korarchaeum cryptofilum (strain OPF8)
GN=rps7 PE=3 SV=1
Length = 208
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 15/103 (14%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
+IKLFGRWS DD+++ + +L++ I++K +LPH+ GR+ K+F K + PIVERL N
Sbjct: 10 QIKLFGRWSYDDLRIENAALKNVISLK---PVYLPHTGGRHEHKKFGKLEIPIVERLVNR 66
Query: 93 LM------------MHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
LM ++ +N KKL A+R VK+AFEII L TG+
Sbjct: 67 LMGQAMNSGSRKDHVNSKNQGKKLKAMRTVKYAFEIIELRTGK 109
>sp|Q8ZYK5|RS7_PYRAE 30S ribosomal protein S7 OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=rps7
PE=3 SV=1
Length = 223
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 34 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 93
I LFG+WS +DV V D L+ YI +K LPH+ GRY RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLK---PVILPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 94 MMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
M GRN KK A IVK AF++I+ TG+
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGK 125
>sp|P35026|RS7_SULSO 30S ribosomal protein S7 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps7 PE=3 SV=3
Length = 193
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
+IK+FG+W V++ D SL+ YI++ +LPH+ GR+ +RF KA+ PIVERL N
Sbjct: 9 DIKVFGKWDTK-VEIRDPSLKKYISLM---PVYLPHTGGRHEHRRFGKAKVPIVERLINQ 64
Query: 93 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
+M GRN KK +A IVK AF+II+L TG+
Sbjct: 65 IMRPGRNKGKKHLAYNIVKLAFDIIYLKTGQ 95
>sp|A1RSA1|RS7_PYRIL 30S ribosomal protein S7 OS=Pyrobaculum islandicum (strain DSM 4184
/ JCM 9189) GN=rps7 PE=3 SV=1
Length = 224
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 36 LFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMM 95
LFG+WS ++V V D L+ YI +K LPH+ GRY RF KA+ PIVERL N +M
Sbjct: 42 LFGKWSFENVVVKDPGLRRYICLK---PVLLPHTEGRYQKHRFGKARIPIVERLINLMMR 98
Query: 96 HGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
GRN KK A IVK AF+II+ TG+
Sbjct: 99 PGRNTGKKHKAYNIVKRAFDIIYYKTGQ 126
>sp|Q976B0|RS7_SULTO 30S ribosomal protein S7 OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=rps7 PE=3 SV=1
Length = 194
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
++K+FG+W V++ D SL+ YI + +LPH+ GR+ +RF KA+ PIVERL N+
Sbjct: 10 DLKVFGKWDTK-VEIRDPSLKKYIGLM---PVYLPHTGGRHEHRRFGKAKLPIVERLINN 65
Query: 93 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
+M GRN KK++A IVK AF+II L TG+
Sbjct: 66 VMRPGRNKGKKMLAYNIVKTAFDIIALKTGQ 96
>sp|B1YC67|RS7_PYRNV 30S ribosomal protein S7 OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rps7 PE=3 SV=1
Length = 224
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 36 LFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMM 95
LFG+WS ++V V D L+ YI +K LPH+ GRY RF KA+ PIVERL N +M
Sbjct: 42 LFGKWSFENVVVRDPGLRRYICLK---PVVLPHTEGRYQNYRFGKARIPIVERLINLMMR 98
Query: 96 HGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
GRN KK A IVK AF+I++ TG+
Sbjct: 99 PGRNAGKKHKAYNIVKRAFDIVYYKTGQ 126
>sp|A8MBL5|RS7_CALMQ 30S ribosomal protein S7 OS=Caldivirga maquilingensis (strain ATCC
700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=rps7 PE=3
SV=2
Length = 224
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 34 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 93
I LFG+W+ +DV + D L+ Y+ +K LPH+ G+Y ++F KA PI+ER+ N L
Sbjct: 40 ILLFGKWNVNDVVIRDPGLRRYMCLK---PMLLPHTEGKYQNRKFGKAMIPIIERMMNQL 96
Query: 94 MMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
M GRN KK A +I+K AF+II++ TG+
Sbjct: 97 MKPGRNAGKKQKAYKILKTAFDIIYVATGK 126
>sp|P17198|RS7_SULAC 30S ribosomal protein S7 OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=rps7 PE=3 SV=1
Length = 195
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
Query: 34 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 93
+K+FG+W V+V D SL+ YI + + +LPH+ GR+ +RF K++ PIVERL N+L
Sbjct: 12 VKVFGKWDTK-VEVRDPSLKKYIDLM---SIYLPHTGGRHEHRRFGKSRIPIVERLINNL 67
Query: 94 MMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
M GRN KK++A IVK F+II + TG+
Sbjct: 68 MRPGRNKGKKMLAYNIVKTTFDIIAVKTGQ 97
>sp|P32552|RS7_HALMA 30S ribosomal protein S7 OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps7 PE=1
SV=2
Length = 206
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 30 ELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERL 89
E KLFG W D++ SD S + YI V + H+ GR+A K+F+K++ IVERL
Sbjct: 20 ETARAKLFGEWDITDIEYSDPSTERYITVTP-----IAHTMGRHADKQFKKSEISIVERL 74
Query: 90 TNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
N LM N KK +A IV AFE++H T E
Sbjct: 75 INRLMQTDENTGKKQLATSIVTEAFELVHERTDE 108
>sp|A0B563|RS7_METTP 30S ribosomal protein S7 OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rps7 PE=3 SV=1
Length = 185
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 34 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 93
+K+FG+W +V++ D+S++ YI +K + + H+ GR+A ++F+K++ +VERL N +
Sbjct: 1 MKVFGKWDASEVEIPDLSVKGYINLK---PRIVLHTGGRHAKQQFKKSELHVVERLINKM 57
Query: 94 MMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
M +N +K +A RIV+ AF+IIH T E
Sbjct: 58 MRKEKNTGQKQIAYRIVEEAFDIIHSRTKE 87
>sp|P0CX01|RS7_HALSA 30S ribosomal protein S7 OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rps7 PE=3 SV=1
Length = 210
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Query: 35 KLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLM 94
KLFG+W ++ D S + Y+AV + H+ GR+A K+F+K++ IVERL N LM
Sbjct: 29 KLFGKWDVAEIHYEDPSTRRYLAVTP-----VAHTMGRHAQKQFKKSEISIVERLANRLM 83
Query: 95 MHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
G N KK A++IV+ AF+I+H T E
Sbjct: 84 KTGANAGKKQQALKIVRDAFDIVHERTDE 112
>sp|B0R8D0|RS7_HALS3 30S ribosomal protein S7 OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rps7 PE=3 SV=1
Length = 210
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Query: 35 KLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLM 94
KLFG+W ++ D S + Y+AV + H+ GR+A K+F+K++ IVERL N LM
Sbjct: 29 KLFGKWDVAEIHYEDPSTRRYLAVTP-----VAHTMGRHAQKQFKKSEISIVERLANRLM 83
Query: 95 MHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
G N KK A++IV+ AF+I+H T E
Sbjct: 84 KTGANAGKKQQALKIVRDAFDIVHERTDE 112
>sp|Q2FS70|RS7_METHJ 30S ribosomal protein S7 OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=rps7 PE=3 SV=1
Length = 194
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 25 IAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCP 84
++APA L LF RW +V + D + Y+ + N+ +PHS GR + F KA
Sbjct: 5 VSAPARL----LFNRWDTSEVTIRDPGIARYVNL---NSMMVPHSCGRLTRQEFHKANML 57
Query: 85 IVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLT 121
IVERL N LM N KK +A+RIV+ AFEI+H T
Sbjct: 58 IVERLINQLMRTEVNTGKKQLAIRIVRDAFEIVHQKT 94
>sp|Q8U0M8|RS7_PYRFU 30S ribosomal protein S7 OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rps7 PE=1 SV=1
Length = 215
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 19/107 (17%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
EIK+ GRWS +DV+V D SL+ YI ++ + LPH+ GR+A K F KA IVERL N
Sbjct: 14 EIKVMGRWSTEDVEVRDPSLKPYINLE---PRLLPHTHGRHAKKHFGKANVHIVERLINK 70
Query: 93 LMMHGRN----------------NAKKLMAVRIVKHAFEIIHLLTGE 123
+M G + N+KK+ A +VK AF+II TG+
Sbjct: 71 IMRSGGSHYKVAGHFMRREHRSLNSKKVKAYEVVKEAFKIIEQRTGK 117
>sp|A6UV45|RS7_META3 30S ribosomal protein S7 OS=Methanococcus aeolicus (strain Nankai-3
/ ATCC BAA-1280) GN=rps7 PE=3 SV=1
Length = 188
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
EIKLF +W ++ V D SL+ YI ++ F+PH++GR + + F KA+ IVERL N+
Sbjct: 2 EIKLFNKWDTTEIVVKDPSLRHYINLE---PIFVPHTSGRNSGRMFEKAKMNIVERLVNN 58
Query: 93 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
LM +N +K + + IV+ AFEII T E
Sbjct: 59 LMRAEQNTGQKQVTLSIVEEAFEIIEKRTNE 89
>sp|Q9V109|RS7_PYRAB 30S ribosomal protein S7 OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=rps7 PE=3 SV=1
Length = 215
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 19/107 (17%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
EIK+ GRWS +DV+V D SL+ YI ++ + LPH+ GR+A K F KA IVERL N
Sbjct: 14 EIKVMGRWSTEDVEVRDPSLKPYINLE---PRLLPHTHGRHAKKHFGKANVHIVERLINK 70
Query: 93 LMMHGRN----------------NAKKLMAVRIVKHAFEIIHLLTGE 123
+M G + N+KK+ A +VK AF+II TG+
Sbjct: 71 IMRSGGSHYKVAGHFMRREHRSLNSKKVKAYEVVKEAFKIIEKRTGK 117
>sp|O59230|RS7_PYRHO 30S ribosomal protein S7 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps7 PE=1 SV=1
Length = 218
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 19/107 (17%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
EIK+ GRWS +DV+V D SL+ YI ++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLE---PRLLPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 93 LMMHGRN----------------NAKKLMAVRIVKHAFEIIHLLTGE 123
+M G + N+KK+ A +VK AF+II TG+
Sbjct: 74 VMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGK 120
>sp|C5A203|RS7_THEGJ 30S ribosomal protein S7 OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=rps7 PE=3 SV=1
Length = 215
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 19/107 (17%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
E+K+FGRWS +DV V+D SL+ YIA++ + LPHS GR+A K F KAQ IVERL N
Sbjct: 14 ELKVFGRWSVEDVTVNDPSLRPYIALE---PRILPHSHGRHAKKPFGKAQVHIVERLINK 70
Query: 93 LMMHGRNN----------------AKKLMAVRIVKHAFEIIHLLTGE 123
+M G ++ +KK+ A +VK AF II T +
Sbjct: 71 VMRSGASHYKAGGHFMRREHRSIMSKKMKAYEVVKEAFMIIERRTKQ 117
>sp|O27130|RS7_METTH 30S ribosomal protein S7 OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rps7 PE=3 SV=1
Length = 186
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 36 LFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMM 95
+F +W D+V+V DM L YI + ++ +PH+ GR+ ++F K++ IVERL N +M
Sbjct: 4 VFDKWELDEVKVEDMGLAKYICL---DSILVPHTMGRHVKRQFAKSKVSIVERLINKVMR 60
Query: 96 HGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
RN+ KK A +IV+ AFEII+ T E
Sbjct: 61 TERNSGKKNKAYKIVQEAFEIINRRTKE 88
>sp|O28386|RS7_ARCFU 30S ribosomal protein S7 OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rps7 PE=3 SV=1
Length = 194
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
E+ +FG++ +VQ+SD +L+ YI ++ K++PH+ GR+A F K + IVERL N
Sbjct: 9 ELLVFGKYDPSEVQISDPALESYICLE---PKYVPHNHGRHANVPFAKQKVFIVERLINK 65
Query: 93 LMMHGRNNAKKLMAVRIVKHAFEIIHLLT 121
+M G N KK++A IVK AFEII T
Sbjct: 66 VMRKGHNTGKKILAYNIVKEAFEIIEKKT 94
>sp|A4FWF1|RS7_METM5 30S ribosomal protein S7 OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rps7 PE=3 SV=1
Length = 188
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
EIKLFG+W + V V D SL+ YI+V +PH+AGR K F KA+ IVERL N
Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYISVA---PVLVPHTAGRNTKKSFDKAKMNIVERLANK 58
Query: 93 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
LM + N KK + IV+ A II T E
Sbjct: 59 LMANQNNTGKKHETLAIVEEALAIIENRTKE 89
>sp|A9A9U5|RS7_METM6 30S ribosomal protein S7 OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=rps7 PE=3 SV=1
Length = 188
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
EIKLFG+W + V V D SL+ Y++V +PH+AGR + K F K++ IVERL N
Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYVSV---TPVLVPHTAGRNSKKSFDKSKMNIVERLANK 58
Query: 93 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
LM + N KK + IV+ A II T E
Sbjct: 59 LMANQNNTGKKHETLAIVEEALTIIENRTKE 89
>sp|Q6LXI3|RS7_METMP 30S ribosomal protein S7 OS=Methanococcus maripaludis (strain S2 /
LL) GN=rps7 PE=3 SV=1
Length = 188
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
EIKLFG+W + V V D SL+ YI+V +PH+AGR + K F K++ IVERL N
Sbjct: 2 EIKLFGKWDSETVAVKDPSLKSYISVA---PVLVPHTAGRNSKKSFDKSKMNIVERLANK 58
Query: 93 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
LM + N KK + IV+ A II T E
Sbjct: 59 LMANQNNTGKKHETLAIVEEALTIIENRTKE 89
>sp|Q5JE04|RS7_PYRKO 30S ribosomal protein S7 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps7 PE=3 SV=1
Length = 215
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 59/107 (55%), Gaps = 19/107 (17%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
E+K+ GRWS +DV V D SL+ YI + +A+ LPHS GRYA K F KA IVERL N
Sbjct: 14 EVKVMGRWSVEDVTVEDPSLKPYINL---DARILPHSHGRYAKKPFGKANVHIVERLINK 70
Query: 93 LMMHGRNN----------------AKKLMAVRIVKHAFEIIHLLTGE 123
+M G ++ +KK+ A +VK AF II T +
Sbjct: 71 VMRSGASHYKAGGHFMRREHRSIMSKKMKAYEVVKEAFMIIERRTKQ 117
>sp|O93631|RS7_METBU 30S ribosomal protein S7 OS=Methanococcoides burtonii (strain DSM
6242) GN=rps7 PE=3 SV=2
Length = 186
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 35 KLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLM 94
KLFG+W +V+V+D ++ Y+ + + +PH++G++A ++F K+ IVERL N++M
Sbjct: 3 KLFGKWDLTEVEVADAGIKRYVNL---DPVIVPHTSGKHARQQFNKSDITIVERLVNNVM 59
Query: 95 MHGRNNAKKLMAVRIVKHAFEIIHLLT 121
+ +N KK +A+RIV AF+I++ T
Sbjct: 60 RNAQNTGKKQIALRIVDEAFDIVNSKT 86
>sp|A6VGV4|RS7_METM7 30S ribosomal protein S7 OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=rps7 PE=3 SV=1
Length = 188
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 33 EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 92
EIKLFG+W + V V D SL+ Y++V +PH+AGR + K F K++ IVERL N
Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYVSVA---PVLVPHTAGRNSKKSFDKSKMNIVERLANK 58
Query: 93 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
LM + N KK + IV+ A II T E
Sbjct: 59 LMANQENTGKKHETLAIVEEALTIIENRTKE 89
>sp|Q2NEK9|RS7_METST 30S ribosomal protein S7 OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rps7 PE=3 SV=1
Length = 187
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 35 KLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLM 94
KLF +W +V V DM LQ+Y+ + E +PH+ GR+ ++F K++ IVERL N +M
Sbjct: 4 KLFDKWDVTEVTVEDMGLQNYVCLDEI---VVPHTMGRHVKRQFAKSKVSIVERLMNKIM 60
Query: 95 MHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
RN+ KK A IV+ A EII+ T +
Sbjct: 61 RTERNSGKKNKAYSIVEDALEIINNKTKQ 89
>sp|P15356|RS7_HALMO 30S ribosomal protein S7 OS=Halococcus morrhuae GN=rps7 PE=3 SV=1
Length = 203
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 35 KLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLM 94
KLF RW ++ D S + YI V + H+ GR+A K+F+K++ IVERL N LM
Sbjct: 22 KLFERWDVTGIEYDDPSTERYITVTP-----VEHTMGRHAGKQFQKSEISIVERLINRLM 76
Query: 95 MHGRNNAKKLMAVRIVKHAFEIIHLLTGE 123
N KK A RIV++AF++I T E
Sbjct: 77 QTDENTGKKQQATRIVRNAFDLIAERTEE 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,471,706
Number of Sequences: 539616
Number of extensions: 1602545
Number of successful extensions: 4178
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4046
Number of HSP's gapped (non-prelim): 83
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)