Query psy10068
Match_columns 157
No_of_seqs 57 out of 59
Neff 2.3
Searched_HMMs 29240
Date Fri Aug 16 17:04:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10068.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10068hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2efk_A CDC42-interacting prote 99.1 2.4E-11 8.1E-16 94.4 4.0 80 7-89 5-85 (301)
2 2efl_A Formin-binding protein 99.1 1E-10 3.4E-15 90.5 4.7 85 2-89 7-92 (305)
3 4dyl_A Tyrosine-protein kinase 98.9 9.2E-10 3.2E-14 92.5 5.8 77 10-90 13-89 (406)
4 2v0o_A FCHO2, FCH domain only 98.9 3.4E-09 1.2E-13 81.3 7.7 72 9-89 18-89 (276)
5 2x3v_A Syndapin I, protein kin 98.9 2.4E-09 8.4E-14 85.5 6.4 76 9-89 20-95 (337)
6 3abh_A Pacsin2, protein kinase 98.8 1.4E-08 4.7E-13 80.4 7.3 76 9-89 29-104 (312)
7 3aco_A Pacsin2, protein kinase 98.8 9.5E-09 3.2E-13 83.2 6.2 76 9-89 29-104 (350)
8 3i2w_A Syndapin, LD46328P; EFC 98.7 2.8E-08 9.6E-13 77.9 6.4 75 10-89 9-83 (290)
9 3m3w_A Pacsin3, protein kinase 98.6 3.7E-08 1.3E-12 80.1 6.4 75 10-89 21-95 (320)
10 3haj_A Human pacsin2 F-BAR; pa 98.6 5.8E-08 2E-12 83.0 6.5 77 9-90 22-98 (486)
11 3g9g_A Suppressor of yeast pro 97.5 0.0004 1.4E-08 58.0 8.7 45 10-54 44-88 (287)
12 3qwe_A GMIP, GEM-interacting p 95.5 0.034 1.2E-06 46.6 7.1 40 18-57 23-62 (279)
13 2jrz_A Histone demethylase jar 70.3 1.6 5.3E-05 31.4 1.3 28 10-37 1-28 (117)
14 2eqy_A RBP2 like, jumonji, at 64.5 1.8 6.1E-05 31.4 0.6 28 10-37 3-30 (122)
15 2cly_C ATP synthase coupling f 56.1 19 0.00066 25.5 4.7 35 20-54 8-52 (77)
16 2zd7_A VPS75, vacuolar protein 47.3 39 0.0014 27.4 5.9 54 27-80 10-63 (264)
17 2kk0_A AT-rich interactive dom 43.2 14 0.00047 27.5 2.4 27 10-37 25-51 (145)
18 2e50_A Protein SET; histone ch 42.2 83 0.0028 24.9 6.9 62 20-81 27-88 (225)
19 2lm1_A Lysine-specific demethy 42.2 4.2 0.00014 28.3 -0.6 28 10-37 5-32 (107)
20 2cxy_A BAF250B subunit, HBAF25 40.5 11 0.00038 27.1 1.5 26 10-36 12-37 (125)
21 3kyp_A Pfnaps, nucleosome asse 37.9 42 0.0014 25.9 4.5 46 36-81 13-58 (193)
22 2li6_A SWI/SNF chromatin-remod 35.0 8.9 0.00031 27.3 0.2 27 10-36 9-35 (116)
23 1jrj_A Exendin-4; Trp-CAGE, GL 26.4 93 0.0032 19.5 3.8 26 40-65 8-34 (39)
24 2f3y_B Voltage-dependent L-typ 26.0 26 0.00089 20.6 1.1 8 28-35 8-15 (26)
25 4hpq_C ATG17, KLTH0D15642P; au 25.9 2.9E+02 0.01 24.0 8.3 27 7-33 306-332 (413)
26 4hw4_A Induced myeloid leukemi 25.0 2.2E+02 0.0074 21.3 7.9 56 19-74 3-72 (157)
27 3v1a_A Computational design, M 23.9 30 0.001 22.5 1.3 21 115-135 8-28 (48)
28 1y66_A Engrailed homeodomain; 23.3 1E+02 0.0036 20.3 3.8 23 25-47 9-35 (52)
29 2be6_D Voltage-dependent L-typ 23.1 31 0.0011 21.7 1.2 7 28-34 17-23 (37)
30 3i9s_A Integron cassette prote 22.1 19 0.00064 23.9 0.0 18 84-101 2-19 (183)
No 1
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=99.13 E-value=2.4e-11 Score=94.39 Aligned_cols=80 Identities=13% Similarity=0.182 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhccCC-CCcchhHHHHHhhhhhh
Q psy10068 7 LNEQLRCLDLRMETQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQLRHKEQKQNELDNN-VNSLGYQYEVEDLSMKS 85 (157)
Q Consensus 7 L~EQLKcLd~r~E~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~~R~K~~k~krdqw~-lss~~~W~~lL~~t~~~ 85 (157)
|-+|+++|..|++.-..++.||.+||++||+||.+||++|.|||+++..+... +-+..+ .+...+|..|++++...
T Consensus 5 fw~g~~~l~~~~~~g~~~~~el~~f~keRa~iE~eYak~L~kLakk~~~~~~~---~~~~~~~~t~~~~w~~~l~~~e~~ 81 (301)
T 2efk_A 5 SSGQFEVLERHTQWGLDLLDRYVKFVKERTEVEQAYAKQLRSLVKKYLPKRPA---KDDPESKFSQQQSFVQILQEVNDF 81 (301)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC----------CTTSHHHHHHHHHHHHHHHH
T ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cccccccchHHHHHHHHHHHHHHH
Confidence 44799999999999999999999999999999999999999999999754210 111111 24457999999998755
Q ss_pred ccCc
Q psy10068 86 TSGK 89 (157)
Q Consensus 86 ~~g~ 89 (157)
+.-|
T Consensus 82 a~~h 85 (301)
T 2efk_A 82 AGQR 85 (301)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 2
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=99.06 E-value=1e-10 Score=90.47 Aligned_cols=85 Identities=16% Similarity=0.229 Sum_probs=65.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhccC-CCCcchhHHHHHh
Q psy10068 2 DIRLQLNEQLRCLDLRMETQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQLRHKEQKQNELDN-NVNSLGYQYEVED 80 (157)
Q Consensus 2 EIR~QL~EQLKcLd~r~E~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~~R~K~~k~krdqw-~lss~~~W~~lL~ 80 (157)
.+...|-+|+++|..|++.-+.++.||.+||++||+||.+||++|.|||.++..+.. .+-+.+ .-+...+|..|++
T Consensus 7 ~f~~~fw~g~~~l~~r~~~g~~~~~el~~f~~eRa~iE~eYak~L~kLa~~~~~~~~---~~~~~~~~~t~~~aw~~~~~ 83 (305)
T 2efl_A 7 SWGTELWDQFDNLEKHTQWGIDILEKYIKFVKERTEIELSYAKQLRNLSKKYQPKKN---SKEEEEYKYTSCKAFISNLN 83 (305)
T ss_dssp CHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----------CTTSHHHHHHHHHHH
T ss_pred ChhhHHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cCccccccccHHHHHHHHHH
Confidence 456678889999999999999999999999999999999999999999999865431 011222 2244479999999
Q ss_pred hhhhhccCc
Q psy10068 81 LSMKSTSGK 89 (157)
Q Consensus 81 ~t~~~~~g~ 89 (157)
++...+.-|
T Consensus 84 ~~e~~a~~h 92 (305)
T 2efl_A 84 EMNDYAGQH 92 (305)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 886554433
No 3
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=98.93 E-value=9.2e-10 Score=92.52 Aligned_cols=77 Identities=8% Similarity=0.069 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhHHHHHhhhhhhccCc
Q psy10068 10 QLRCLDLRMETQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQLRHKEQKQNELDNNVNSLGYQYEVEDLSMKSTSGK 89 (157)
Q Consensus 10 QLKcLd~r~E~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~~R~K~~k~krdqw~lss~~~W~~lL~~t~~~~~g~ 89 (157)
...+|..|++.-..+|.||.+|||.||+||.+||++|.|||++|..+... .++..-+...+|..|++++...+.-|
T Consensus 13 gf~~L~kr~~~g~~lledl~~F~reRA~IE~eYAk~L~kLakk~~~k~~~----~~~~~~tl~~aW~~ll~ete~~a~~H 88 (406)
T 4dyl_A 13 GHGVLQQMQEAELRLLEGMRKWMAQRVKSDREYAGLLHHMSLQDSGGQSR----AISPDSPISQSWAEITSQTEGLSRLL 88 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----CCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999875331 22111122379999999998776665
Q ss_pred C
Q psy10068 90 A 90 (157)
Q Consensus 90 a 90 (157)
.
T Consensus 89 ~ 89 (406)
T 4dyl_A 89 R 89 (406)
T ss_dssp H
T ss_pred H
Confidence 4
No 4
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=98.91 E-value=3.4e-09 Score=81.32 Aligned_cols=72 Identities=24% Similarity=0.199 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhHHHHHhhhhhhccC
Q psy10068 9 EQLRCLDLRMETQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQLRHKEQKQNELDNNVNSLGYQYEVEDLSMKSTSG 88 (157)
Q Consensus 9 EQLKcLd~r~E~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~~R~K~~k~krdqw~lss~~~W~~lL~~t~~~~~g 88 (157)
+++.+|..|++.-..++.||.+||++||+||.+||++|.|||+++... .-.-+...+|..|++.+...+.-
T Consensus 18 ~g~~~l~~~~~~g~~~~~el~~f~~eRa~iE~eYak~L~kLa~~~~~~---------~~~gs~~~~w~~~~~~~e~~a~~ 88 (276)
T 2v0o_A 18 SGFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLAKSASNY---------SQLGTFAPVWDVFKTSTEKLANC 88 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------CCCSSSGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---------CCcchHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999998531 11223336999999987544443
Q ss_pred c
Q psy10068 89 K 89 (157)
Q Consensus 89 ~ 89 (157)
|
T Consensus 89 h 89 (276)
T 2v0o_A 89 H 89 (276)
T ss_dssp H
T ss_pred H
Confidence 3
No 5
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=98.88 E-value=2.4e-09 Score=85.53 Aligned_cols=76 Identities=12% Similarity=0.067 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhHHHHHhhhhhhccC
Q psy10068 9 EQLRCLDLRMETQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQLRHKEQKQNELDNNVNSLGYQYEVEDLSMKSTSG 88 (157)
Q Consensus 9 EQLKcLd~r~E~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~~R~K~~k~krdqw~lss~~~W~~lL~~t~~~~~g 88 (157)
.++++|..|++.-..++.||.+||++||+||.+||++|.|||.++..++.. .+ -.-+...+|..|++.+...+.-
T Consensus 20 ~g~~~l~~r~~~g~~~~~el~~f~keRa~iE~eYak~L~kLakk~~~~~~~----~~-~~gtl~~aw~~~~~e~e~~a~~ 94 (337)
T 2x3v_A 20 GNYKRTVKRIDDGHRLCNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEK----GP-QYGSLERAWGAMMTEADKVSEL 94 (337)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----SS-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----CC-CCchHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999886542 11 1222336999999988755544
Q ss_pred c
Q psy10068 89 K 89 (157)
Q Consensus 89 ~ 89 (157)
|
T Consensus 95 H 95 (337)
T 2x3v_A 95 H 95 (337)
T ss_dssp H
T ss_pred H
Confidence 3
No 6
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=98.77 E-value=1.4e-08 Score=80.39 Aligned_cols=76 Identities=12% Similarity=0.106 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhHHHHHhhhhhhccC
Q psy10068 9 EQLRCLDLRMETQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQLRHKEQKQNELDNNVNSLGYQYEVEDLSMKSTSG 88 (157)
Q Consensus 9 EQLKcLd~r~E~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~~R~K~~k~krdqw~lss~~~W~~lL~~t~~~~~g 88 (157)
+++++|..|++.-..++.||.+||+.||+||.+||++|.|||.++..++.. .+. .-+...+|..|++.+...+.-
T Consensus 29 ~g~~~l~~r~~~g~~~~~el~~f~keRa~iE~eYak~L~kLakk~~~~~~~----~~e-~gtl~~aw~~i~~e~e~~a~~ 103 (312)
T 3abh_A 29 GNYKRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLTEWARRWRQLVEK----GPQ-YGTVEKAWMAFMSEAERVSEL 103 (312)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----SSC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCC-CChHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999876531 111 123336999999988765544
Q ss_pred c
Q psy10068 89 K 89 (157)
Q Consensus 89 ~ 89 (157)
|
T Consensus 104 H 104 (312)
T 3abh_A 104 H 104 (312)
T ss_dssp H
T ss_pred H
Confidence 4
No 7
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=98.76 E-value=9.5e-09 Score=83.20 Aligned_cols=76 Identities=12% Similarity=0.106 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhHHHHHhhhhhhccC
Q psy10068 9 EQLRCLDLRMETQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQLRHKEQKQNELDNNVNSLGYQYEVEDLSMKSTSG 88 (157)
Q Consensus 9 EQLKcLd~r~E~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~~R~K~~k~krdqw~lss~~~W~~lL~~t~~~~~g 88 (157)
+++++|..|++.-..++.||.+||+.||+||.+||++|.|||.++..++.. .+. .-+...+|..|++.+...+..
T Consensus 29 ~g~~~L~~r~~~g~~~~~el~~f~keRa~IE~eYak~L~kLakk~~~~~~~----~~e-~gtl~~aw~~l~~e~e~~a~~ 103 (350)
T 3aco_A 29 GNYKRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLTEWARRWRQLVEK----GPQ-YGTVEKAWMAFMSEAERVSEL 103 (350)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----SSC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CCC-CchHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999876531 111 123336999999988755544
Q ss_pred c
Q psy10068 89 K 89 (157)
Q Consensus 89 ~ 89 (157)
|
T Consensus 104 H 104 (350)
T 3aco_A 104 H 104 (350)
T ss_dssp H
T ss_pred H
Confidence 3
No 8
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=98.68 E-value=2.8e-08 Score=77.89 Aligned_cols=75 Identities=17% Similarity=0.147 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhHHHHHhhhhhhccCc
Q psy10068 10 QLRCLDLRMETQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQLRHKEQKQNELDNNVNSLGYQYEVEDLSMKSTSGK 89 (157)
Q Consensus 10 QLKcLd~r~E~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~~R~K~~k~krdqw~lss~~~W~~lL~~t~~~~~g~ 89 (157)
.+..|-.|++.-..++.||.+||++||+||.+||++|.|||.++..++... + -.-+...+|..|++.+...+..|
T Consensus 9 g~~~l~~r~~~g~~~~~el~~f~keRa~iE~~Yak~L~kL~~~~~~~~~~~----~-~~gs~~~aw~~~~~~~e~~a~~h 83 (290)
T 3i2w_A 9 NYKRTTKRIEDGYKLCNDLQQLIQERADIEKGYAKSLRTWSKKWGELIEKG----P-EYGTTEAAWKGVLTESERISDVH 83 (290)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS----S-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----C-CCchHHHHHHHHHHHHHHHHHHH
Confidence 467888999999999999999999999999999999999999998755321 1 12233469999998877555544
No 9
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=98.65 E-value=3.7e-08 Score=80.08 Aligned_cols=75 Identities=17% Similarity=0.135 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhHHHHHhhhhhhccCc
Q psy10068 10 QLRCLDLRMETQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQLRHKEQKQNELDNNVNSLGYQYEVEDLSMKSTSGK 89 (157)
Q Consensus 10 QLKcLd~r~E~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~~R~K~~k~krdqw~lss~~~W~~lL~~t~~~~~g~ 89 (157)
++..|-.+++.-..++.||.+||+.||+||.+||+.|.|||.+|..+... .+ -.-+...+|..|++.+...+.-|
T Consensus 21 g~~~l~~~~~~g~~~~~el~~f~keRa~iE~~Yak~L~kLakk~~~~~~~----~~-e~gsl~~aw~~i~~e~e~~a~~H 95 (320)
T 3m3w_A 21 NYRRTVQRVEDGHRLCGDLVSCFQERARIEKAYAQQLADWARKWRGAVEK----GP-QYGTLEKAWHAFFTAAERLSELH 95 (320)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----SS-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----CC-CCChHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999998765431 11 12233369999999887655544
No 10
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=98.60 E-value=5.8e-08 Score=82.99 Aligned_cols=77 Identities=12% Similarity=0.105 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhHHHHHhhhhhhccC
Q psy10068 9 EQLRCLDLRMETQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQLRHKEQKQNELDNNVNSLGYQYEVEDLSMKSTSG 88 (157)
Q Consensus 9 EQLKcLd~r~E~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~~R~K~~k~krdqw~lss~~~W~~lL~~t~~~~~g 88 (157)
.++.+|-.|++.-+.++.||.+||++||+||.+||+.|.|||+++..+++.. ...-+...+|..|++++...+..
T Consensus 22 ~G~~~L~~r~~~g~~~~~el~~f~keRa~iE~eYAk~L~kLakk~~~~~~~~-----~e~gtl~~aw~~~~~e~e~~a~~ 96 (486)
T 3haj_A 22 GNYKRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKG-----PQYGTVEKAWMAFMSEAERVSEL 96 (486)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-----SCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-----CCccHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999999999999997765421 11223347999999988766555
Q ss_pred cC
Q psy10068 89 KA 90 (157)
Q Consensus 89 ~a 90 (157)
|.
T Consensus 97 H~ 98 (486)
T 3haj_A 97 HL 98 (486)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 11
>3g9g_A Suppressor of yeast profilin deletion; SYP1, BAR domain, FCH, adaptor, endocytosis, phosphoprotein; 2.40A {Saccharomyces cerevisiae}
Probab=97.50 E-value=0.0004 Score=57.96 Aligned_cols=45 Identities=13% Similarity=0.287 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q psy10068 10 QLRCLDLRMETQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQ 54 (157)
Q Consensus 10 QLKcLd~r~E~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~ 54 (157)
=..+|-.|...--.+-.||.+||+-|++||..||+.|-||+++..
T Consensus 44 a~~iL~~Rl~~~k~i~keL~~f~kERa~IEe~YakqLrkLakk~~ 88 (287)
T 3g9g_A 44 ATETIRIRLSQVKLLNKDFYLLFKELANLKRNYAQQLRKIIAENE 88 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 356788888877778999999999999999999999999999866
No 12
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens}
Probab=95.53 E-value=0.034 Score=46.58 Aligned_cols=40 Identities=30% Similarity=0.331 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q psy10068 18 METQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQLRH 57 (157)
Q Consensus 18 ~E~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~~R~ 57 (157)
+=.=+.-..|+-.|++||+-||.|||++|-|||+....=+
T Consensus 23 ~K~s~~~~Ke~~~flkKRa~lE~E~Ak~L~KLa~~~~~~~ 62 (279)
T 3qwe_A 23 AKTWSRYAKELLAWTEKRASYELEFAKSTMKIAEAGKVSI 62 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334445579999999999999999999999998765533
No 13
>2jrz_A Histone demethylase jarid1C; bright/ARID domain, helical, structural genomics, structural genomics consortium, SGC, oxidoreductase; NMR {Homo sapiens} PDB: 2yqe_A
Probab=70.32 E-value=1.6 Score=31.42 Aligned_cols=28 Identities=4% Similarity=0.273 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10068 10 QLRCLDLRMETQTAVIGELQDYFRKRAE 37 (157)
Q Consensus 10 QLKcLd~r~E~q~~LLqDLqEffRRRAE 37 (157)
||.+||..+..+..++.+|..|+.+|+-
T Consensus 1 ~Lnele~~~r~~~~Fl~~L~~F~~~rG~ 28 (117)
T 2jrz_A 1 SMNELEAQTRVKLNYLDQIAKFWEIQGS 28 (117)
T ss_dssp CTHHHHTSTTTHHHHHHHHHHHHHTTTS
T ss_pred CccccccchhHHHHHHHHHHHHHHHcCC
Confidence 6789999999999999999999999873
No 14
>2eqy_A RBP2 like, jumonji, at rich interactive domain 1B; ARID domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=64.53 E-value=1.8 Score=31.41 Aligned_cols=28 Identities=4% Similarity=0.165 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10068 10 QLRCLDLRMETQTAVIGELQDYFRKRAE 37 (157)
Q Consensus 10 QLKcLd~r~E~q~~LLqDLqEffRRRAE 37 (157)
||.+||..+..+..++.+|..|+.+|+-
T Consensus 3 ~Lnele~~~~~~~~Fl~~L~~F~~~rG~ 30 (122)
T 2eqy_A 3 SGSSGEAQTRVKLNFLDQIAKYWELQGS 30 (122)
T ss_dssp CCCCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccccccchHHHHHHHHHHHHHHHcCC
Confidence 5778999999999999999999999863
No 15
>2cly_C ATP synthase coupling factor 6, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus} SCOP: f.45.1.1 PDB: 1vzs_A 2wss_V*
Probab=56.13 E-value=19 Score=25.52 Aligned_cols=35 Identities=26% Similarity=0.395 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHH----------HHhHHHHHHHHHHHHHHH
Q psy10068 20 TQTAVIGELQDYFRKRA----------EVELDYSKSLDKLARSLQ 54 (157)
Q Consensus 20 ~q~~LLqDLqEffRRRA----------EIE~EYSR~LEKLAerf~ 54 (157)
.+.-+|.-|.||=.+.+ |++.|+...|+||+..|-
T Consensus 8 IQqLFldKIREYk~Ks~~~G~lVD~~Pe~~kel~~el~kL~~~YG 52 (77)
T 2cly_C 8 VQKLFVDKIREYRTKRQTSGGPVDAGPEYQQDLDRELFKLKQMYG 52 (77)
T ss_dssp GGHHHHHHHHHHHHHHTCCSSSSSCCTHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 35567888999965554 699999999999998875
No 16
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=47.30 E-value=39 Score=27.36 Aligned_cols=54 Identities=11% Similarity=-0.106 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhHHHHHh
Q psy10068 27 ELQDYFRKRAEVELDYSKSLDKLARSLQLRHKEQKQNELDNNVNSLGYQYEVED 80 (157)
Q Consensus 27 DLqEffRRRAEIE~EYSR~LEKLAerf~~R~K~~k~krdqw~lss~~~W~~lL~ 80 (157)
+|+..+.+-++||.++.+...+|-..|..+.+-.=.||..-....++.|.-++.
T Consensus 10 ~l~~~~~~l~~lq~e~~~~~~ele~ky~~~~~Ply~kR~eII~~IP~FWltal~ 63 (264)
T 2zd7_A 10 EHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLS 63 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcchhHHHHHHH
Confidence 455666666666776666666665555555444333444444467888977664
No 17
>2kk0_A AT-rich interactive domain-containing protein 3A; DEAD ringer, AT-rich interaction domain, NESG, ARID, cytopla binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=43.24 E-value=14 Score=27.47 Aligned_cols=27 Identities=26% Similarity=0.377 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10068 10 QLRCLDLRMETQTAVIGELQDYFRKRAE 37 (157)
Q Consensus 10 QLKcLd~r~E~q~~LLqDLqEffRRRAE 37 (157)
+|..|+...+ +..+|.+|..|+.+|+-
T Consensus 25 ~L~eL~~~~~-~~~Fl~~L~~F~~~rG~ 51 (145)
T 2kk0_A 25 QLYELDGDPK-RKEFLDDLFSFMQKRGT 51 (145)
T ss_dssp HHHHTTCCHH-HHHHHHHHHHHHHHTTC
T ss_pred cHhhccCchh-HHHHHHHHHHHHHHcCC
Confidence 6788999999 89999999999999974
No 18
>2e50_A Protein SET; histone chaperone, inhat, PP2AI, protein binding; HET: TRE; 2.30A {Homo sapiens} SCOP: d.305.1.1
Probab=42.17 E-value=83 Score=24.92 Aligned_cols=62 Identities=8% Similarity=-0.023 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhHHHHHhh
Q psy10068 20 TQTAVIGELQDYFRKRAEVELDYSKSLDKLARSLQLRHKEQKQNELDNNVNSLGYQYEVEDL 81 (157)
Q Consensus 20 ~q~~LLqDLqEffRRRAEIE~EYSR~LEKLAerf~~R~K~~k~krdqw~lss~~~W~~lL~~ 81 (157)
.....|..|++--..-..|+.++++..-+|-..|..+.+-.=.+|..-....++.|.-++-.
T Consensus 27 ~~~~~l~~L~~iQ~e~~~l~~e~~~ev~~lE~ky~~~~~Ply~kR~eII~~IP~FW~tal~n 88 (225)
T 2e50_A 27 EQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVN 88 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHhccccHHHHHHhc
Confidence 34445555555555556666666666555555555544433333333333567888776643
No 19
>2lm1_A Lysine-specific demethylase LID; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Drosophila melanogaster}
Probab=42.17 E-value=4.2 Score=28.26 Aligned_cols=28 Identities=7% Similarity=0.331 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10068 10 QLRCLDLRMETQTAVIGELQDYFRKRAE 37 (157)
Q Consensus 10 QLKcLd~r~E~q~~LLqDLqEffRRRAE 37 (157)
+|..||..++.+..++.+|..|+.+|+-
T Consensus 5 ~L~el~~~~~~~~~F~~~L~~F~~~~g~ 32 (107)
T 2lm1_A 5 RLNELEAKTRVKLNFLDQIAKFWELQGS 32 (107)
T ss_dssp SSCSSCCSSHHHHHHHHHHHHHHTTTCC
T ss_pred ehhhccCCchHHHHHHHHHHHHHHHcCC
Confidence 4667888999999999999999998864
No 20
>2cxy_A BAF250B subunit, HBAF250B; DNA-binding domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Homo sapiens} PDB: 2eh9_A 1ryu_A
Probab=40.52 E-value=11 Score=27.09 Aligned_cols=26 Identities=12% Similarity=0.183 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10068 10 QLRCLDLRMETQTAVIGELQDYFRKRA 36 (157)
Q Consensus 10 QLKcLd~r~E~q~~LLqDLqEffRRRA 36 (157)
+|..|+...+.+. ++.+|..|+.+|+
T Consensus 12 ~L~el~~~~~~~~-Fl~~L~~F~~~rG 37 (125)
T 2cxy_A 12 KVYELGNEPERKL-WVDRYLTFMEERG 37 (125)
T ss_dssp HHHHSCCCTTHHH-HHHHHHHHHHHTT
T ss_pred eHHhccCchhHHH-HHHHHHHHHHHcC
Confidence 6778888888885 9999999999986
No 21
>3kyp_A Pfnaps, nucleosome assembly protein; histone recognition, chaperone; 2.80A {Plasmodium falciparum}
Probab=37.94 E-value=42 Score=25.94 Aligned_cols=46 Identities=4% Similarity=0.042 Sum_probs=23.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchhHHHHHhh
Q psy10068 36 AEVELDYSKSLDKLARSLQLRHKEQKQNELDNNVNSLGYQYEVEDL 81 (157)
Q Consensus 36 AEIE~EYSR~LEKLAerf~~R~K~~k~krdqw~lss~~~W~~lL~~ 81 (157)
.+|+.++++..-+|-.+|..+.+-.=.||..-....++-|..++..
T Consensus 13 ~~l~~~~~~e~~~le~ky~~~~~p~y~kR~~iI~~IP~FW~t~l~n 58 (193)
T 3kyp_A 13 EQLDIKCAHEQMNIQKQYDEKKKPLFEKRDEIIQKIPGFWANTLRK 58 (193)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHhcCCccHHHHHHHc
Confidence 3344444444444444444444433333333333577888877754
No 22
>2li6_A SWI/SNF chromatin-remodeling complex subunit SWI1; ligand binding, DNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=35.00 E-value=8.9 Score=27.28 Aligned_cols=27 Identities=15% Similarity=0.170 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10068 10 QLRCLDLRMETQTAVIGELQDYFRKRA 36 (157)
Q Consensus 10 QLKcLd~r~E~q~~LLqDLqEffRRRA 36 (157)
+|.++|.-++.+..++..|..|+.+|+
T Consensus 9 ~ln~~e~~~~~~~~F~~~L~~F~~~~G 35 (116)
T 2li6_A 9 EKISTELNNKQYELFMKSLIENCKKRN 35 (116)
T ss_dssp BCCCSSSSHHHHHHHHHHHHHHHHTTT
T ss_pred hhhcccccchhHHHHHHHHHHHHHHcC
Confidence 466788999999999999999999886
No 23
>1jrj_A Exendin-4; Trp-CAGE, GLP-1, poly-proii, hydrophobic cluster, hormone/growth factor complex; NMR {Synthetic} SCOP: j.6.1.1
Probab=26.39 E-value=93 Score=19.47 Aligned_cols=26 Identities=19% Similarity=0.093 Sum_probs=18.6
Q ss_pred HHHHHHHHHH-HHHHHHHHHHhhhhhc
Q psy10068 40 LDYSKSLDKL-ARSLQLRHKEQKQNEL 65 (157)
Q Consensus 40 ~EYSR~LEKL-Aerf~~R~K~~k~krd 65 (157)
-+|++-|+.+ |+.|..-+.+.+.+++
T Consensus 8 sdyS~~l~~~aak~fv~wL~~~k~r~~ 34 (39)
T 1jrj_A 8 SDLSKQMEEEAVRLFIEWLKNGGPSSG 34 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTGGGSS
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 4799999876 4678877776665554
No 24
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=25.98 E-value=26 Score=20.65 Aligned_cols=8 Identities=63% Similarity=1.153 Sum_probs=5.8
Q ss_pred HHHHHHHH
Q psy10068 28 LQDYFRKR 35 (157)
Q Consensus 28 LqEffRRR 35 (157)
+|||||+-
T Consensus 8 IqdyfRkf 15 (26)
T 2f3y_B 8 IQEYFRKF 15 (26)
T ss_pred HHHHHHHH
Confidence 67888763
No 25
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=25.91 E-value=2.9e+02 Score=24.03 Aligned_cols=27 Identities=7% Similarity=0.188 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10068 7 LNEQLRCLDLRMETQTAVIGELQDYFR 33 (157)
Q Consensus 7 L~EQLKcLd~r~E~q~~LLqDLqEffR 33 (157)
+.+-+..+-.....+.+.+.+|.+||.
T Consensus 306 i~e~l~~fk~~~~~~~~~~~~L~~~Y~ 332 (413)
T 4hpq_C 306 ISALIQKFKASCLEDIRQTRNLLDFYA 332 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556667888889999998874
No 26
>4hw4_A Induced myeloid leukemia cell differentiation Pro 1; anti-apoptotic protein, BH3 peptides, apoptosis; 1.53A {Homo sapiens} PDB: 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 2kbw_A 4hw3_A* 4hw2_A* 3d7v_A 3io9_A 2nl9_A* 2nla_A 4g35_A* 1wsx_A 2jm6_B 2roc_A 2rod_A 3mk8_B
Probab=25.01 E-value=2.2e+02 Score=21.28 Aligned_cols=56 Identities=13% Similarity=0.156 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHH-------------HHhHHHHHHHHHHHHHHHHHHHH-hhhhhccCCCCcchh
Q psy10068 19 ETQTAVIGELQDYFRKRA-------------EVELDYSKSLDKLARSLQLRHKE-QKQNELDNNVNSLGY 74 (157)
Q Consensus 19 E~q~~LLqDLqEffRRRA-------------EIE~EYSR~LEKLAerf~~R~K~-~k~krdqw~lss~~~ 74 (157)
|.-.|.+.=+.+|+|-|+ -.=.+.++.|-++|+-|..+|.. .+.-..+-.+++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Lr~vgdele~~~~~~f~~m~~~L~it~~~a 72 (157)
T 4hw4_A 3 ELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDD 72 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCCSCCCSSHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCSHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH
Confidence 344567777899999997 13368899999999999998764 232233334444443
No 27
>3v1a_A Computational design, MID1-APO1; helix-turn-helix, metal binding, homodimer, de novo protein, binding protein; 0.98A {Artificial gene} PDB: 3v1b_A* 3v1c_A* 3v1d_A* 3v1f_A* 3v1e_A
Probab=23.86 E-value=30 Score=22.50 Aligned_cols=21 Identities=29% Similarity=0.327 Sum_probs=18.6
Q ss_pred chhhHHHHHhhhhHhhhhhcc
Q psy10068 115 AQEFTIENIISREKHARRYEN 135 (157)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~ 135 (157)
-|.|-|++.|..-+.+|||+.
T Consensus 8 EQ~~~I~~~I~qAk~~rRfdE 28 (48)
T 3v1a_A 8 QQIKNIHSFIHQAKAAGRMDE 28 (48)
T ss_dssp HHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHHHHHhcChHH
Confidence 478999999999999999974
No 28
>1y66_A Engrailed homeodomain; protein design, dioxane, de novo protein; 1.65A {Escherichia coli} PDB: 2p6j_A
Probab=23.26 E-value=1e+02 Score=20.30 Aligned_cols=23 Identities=22% Similarity=0.595 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHhH----HHHHHHH
Q psy10068 25 IGELQDYFRKRAEVEL----DYSKSLD 47 (157)
Q Consensus 25 LqDLqEffRRRAEIE~----EYSR~LE 47 (157)
-..|.+|.||-.||-. |||..|-
T Consensus 9 erklkefvrrhqeitqetlheyaqklg 35 (52)
T 1y66_A 9 ERKLKEFVRRHQEITQETLHEYAQKLG 35 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3468999999999875 5776653
No 29
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens}
Probab=23.10 E-value=31 Score=21.73 Aligned_cols=7 Identities=71% Similarity=1.469 Sum_probs=5.1
Q ss_pred HHHHHHH
Q psy10068 28 LQDYFRK 34 (157)
Q Consensus 28 LqEffRR 34 (157)
+||||||
T Consensus 17 IQdyFRk 23 (37)
T 2be6_D 17 IQEYFRK 23 (37)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6788865
No 30
>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae}
Probab=22.06 E-value=19 Score=23.89 Aligned_cols=18 Identities=11% Similarity=-0.123 Sum_probs=0.0
Q ss_pred hhccCcCCCCCCCCCCCh
Q psy10068 84 KSTSGKASPPEPNNNNDD 101 (157)
Q Consensus 84 ~~~~g~asp~~p~~~~~~ 101 (157)
.+|-.+++||||+++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~ 19 (183)
T 3i9s_A 2 GSSHHHHHHSSGRENLYF 19 (183)
T ss_dssp ------------------
T ss_pred CCccccccccccccccee
Confidence 456778888888777664
Done!