BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10073
(144 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|13929116|ref|NP_113976.1| RE1-silencing transcription factor [Rattus norvegicus]
gi|81908377|sp|O54963.1|REST_RAT RecName: Full=RE1-silencing transcription factor; AltName:
Full=Neural-restrictive silencer factor
gi|2746326|gb|AAB94893.1| zinc finger transcription factor REST protein [Rattus norvegicus]
Length = 1069
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y ++ + ++ H C+ CP
Sbjct: 261 HWRKHLRNHFPRKVYTCSKCN-YFSTEKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 319
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C N+ +S+ + + H+ P P+ C CDY T
Sbjct: 320 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 372
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 373 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 275 YTCSKCNYFSTEKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 329
>gi|254675343|ref|NP_035393.2| RE1-silencing transcription factor [Mus musculus]
gi|341941963|sp|Q8VIG1.2|REST_MOUSE RecName: Full=RE1-silencing transcription factor; AltName:
Full=Neural-restrictive silencer factor
gi|117558671|gb|AAI27066.1| RE1-silencing transcription factor [Mus musculus]
Length = 1082
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 257 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 315
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C N+ +S+ + + H+ P P+ C CDY T
Sbjct: 316 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 368
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 369 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 409
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 271 YTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 325
>gi|18146803|dbj|BAB82460.1| neural-restrictive silencer factor nrsf/rest [Mus musculus]
Length = 1082
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 257 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 315
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C N+ +S+ + + H+ P P+ C CDY T
Sbjct: 316 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 368
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 369 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 409
Score = 43.5 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 271 YTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 325
>gi|148705985|gb|EDL37932.1| RE1-silencing transcription factor [Mus musculus]
Length = 1082
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 257 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 315
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C N+ +S+ + + H+ P P+ C CDY T
Sbjct: 316 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 368
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 369 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 409
Score = 43.5 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 271 YTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 325
>gi|149035172|gb|EDL89876.1| RE1-silencing transcription factor [Rattus norvegicus]
Length = 1048
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 240 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 298
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C N+ +S+ + + H+ P P+ C CDY T
Sbjct: 299 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 351
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 352 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 392
Score = 43.5 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 254 YTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 308
>gi|311262204|ref|XP_003129069.1| PREDICTED: RE1-silencing transcription factor [Sus scrofa]
gi|335293561|ref|XP_003356995.1| PREDICTED: RE1-silencing transcription factor-like [Sus scrofa]
gi|456753171|gb|JAA74113.1| RE1-silencing transcription factor [Sus scrofa]
Length = 1037
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 261 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 319
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C ++ +S+ + + H+ +P C CDY T
Sbjct: 320 RHMRTHSGEKPFKCDQC-SYVASNQHEVTRHARQVHNGPKP------LSCPHCDYKTADR 372
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 373 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 329
>gi|74186662|dbj|BAB23689.3| unnamed protein product [Mus musculus]
Length = 853
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 257 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 315
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C N+ +S+ + + H+ P P+ C CDY T
Sbjct: 316 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 368
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 369 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 409
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 271 YTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 325
>gi|390460850|ref|XP_002745853.2| PREDICTED: LOW QUALITY PROTEIN: RE1-silencing transcription factor
[Callithrix jacchus]
Length = 1244
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 429 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 487
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C ++ +S+ + + H+ P P+ C CDY T
Sbjct: 488 RHMRTHSGEKPFKCDQC-SYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 540
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 541 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 581
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 443 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 497
>gi|260803229|ref|XP_002596493.1| hypothetical protein BRAFLDRAFT_211690 [Branchiostoma floridae]
gi|229281750|gb|EEN52505.1| hypothetical protein BRAFLDRAFT_211690 [Branchiostoma floridae]
Length = 284
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C HC +++++ L H M R VK F+C C Y T
Sbjct: 177 HMGVHTGRRPYKCPHC-DYSATRTTTLKVH------MARHTGVK-PFLCDECGYKTADKT 228
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H +IH GD+ +KC LC Y + +K +L+ H++ KH K
Sbjct: 229 SLVRHIMIHTGDRPYKCELCHYASVRKRELKKHIERKHQKK 269
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 46 NSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
N P C HC ++ + D L H V + +F C CD+ T S ++R H
Sbjct: 13 NRARPYQCAHC-DYRAPDRMALTSH-------VSIHSREPQFTCDKCDFKTRHSSSLRTH 64
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G + F C C Y +++E L+ HV
Sbjct: 65 LRRHAGVRPFHCEQCDYSGFRRETLEAHV 93
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P CK C S ++L M + + Y F C C Y
Sbjct: 121 HMKVHTGEKPFKCKECDYAGSRQIHLDRH-------MAKHTGI-YPFACKECGYRGSQKA 172
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++R H +H G + +KC C Y A + L+ H+
Sbjct: 173 DLRRHMGVHTGRRPYKCPHCDYSATRTTTLKVHM 206
>gi|444516263|gb|ELV11094.1| RE1-silencing transcription factor [Tupaia chinensis]
Length = 979
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 15/139 (10%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTS 61
HW + L K TC CN Y + ++ H +T P C C ++ +
Sbjct: 238 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGEK------PFKCDQC-SYVA 289
Query: 62 SDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCS 121
S+ + + H+ P P+ C CDY T N + H +H+ +QF C +C
Sbjct: 290 SNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCD 343
Query: 122 YGAYQKEKLQFHVKNKHST 140
Y A +K LQ+H K+KH T
Sbjct: 344 YAASKKCNLQYHFKSKHPT 362
>gi|403284745|ref|XP_003933717.1| PREDICTED: LOW QUALITY PROTEIN: RE1-silencing transcription factor
[Saimiri boliviensis boliviensis]
Length = 1190
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 341 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 399
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C ++ +S+ + + H+ P P+ C CDY T
Sbjct: 400 RHMRTHSGEKPFKCDQC-SYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 452
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 453 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 493
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 355 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 409
>gi|395851383|ref|XP_003798239.1| PREDICTED: RE1-silencing transcription factor, partial [Otolemur
garnettii]
Length = 1172
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 367 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 425
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C ++ +S+ + + H+ P P+ C CDY T
Sbjct: 426 RHMRTHSGEKPFKCDQC-SYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 478
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 479 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 519
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 381 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 435
>gi|215820598|ref|NP_001135958.1| RE1-silencing transcription factor [Takifugu rubripes]
gi|167857755|gb|ACA03866.1| NRSF/REST [Takifugu rubripes]
Length = 954
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
CLYC+ Y S H +T P C+ C N+ +++ + + H+
Sbjct: 314 CLYCD-YSSSQKTHLTRHMRTHSGER------PFKCESC-NYLAANQHEVTRHARQVHNG 365
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+P C CDY T N + H +HL +QF C +C Y A +K LQ+H+K++
Sbjct: 366 PKP------LSCPYCDYKTADRSNYKKHVELHLNPRQFLCPVCKYAASKKCNLQYHIKSR 419
Query: 138 HS 139
H+
Sbjct: 420 HA 421
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 51 QSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
+C C F+ N + + VRP F C+ CDY + ++ H H
Sbjct: 284 HTCSQCSYFSDRKSNYIQHIRTHTG--VRP------FQCLYCDYSSSQKTHLTRHMRTHS 335
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G++ FKC C+Y A + ++ H + H+
Sbjct: 336 GERPFKCESCNYLAANQHEVTRHARQVHN 364
>gi|402869727|ref|XP_003898899.1| PREDICTED: RE1-silencing transcription factor [Papio anubis]
Length = 1304
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 471 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 529
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C ++ +S+ + + H+ P P+ C CDY T
Sbjct: 530 RHMRTHSGEKPFKCDQC-SYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 582
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 583 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 623
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 485 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 539
>gi|354498864|ref|XP_003511532.1| PREDICTED: RE1-silencing transcription factor-like [Cricetulus
griseus]
Length = 1068
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 31/163 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 260 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 318
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C ++ +S+ + + H+ P P+ C CDY T
Sbjct: 319 RHMRTHSGEKPFKCDQC-SYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 371
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
N + H +H+ +QF C +C Y A +K LQ+H K+KH T +
Sbjct: 372 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPTSL 414
>gi|62089086|dbj|BAD92987.1| RE1-silencing transcription factor variant [Homo sapiens]
Length = 1126
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 291 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 349
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C ++ +S+ + + H+ P P+ C CDY T
Sbjct: 350 RHMRTHSGEKPFKCDQC-SYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 402
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 403 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 443
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 305 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 359
>gi|345322786|ref|XP_003430630.1| PREDICTED: RE1-silencing transcription factor-like [Ornithorhynchus
anatinus]
Length = 937
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + +S+ + + H+ +P C CDY T N + H +H
Sbjct: 351 PFKCDQCI-YVASNQHEVTRHARQVHNGPKP------LTCPHCDYKTADRSNFKKHVELH 403
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ +QF C +C Y A +K LQ+H+K++H
Sbjct: 404 VNPRQFLCPVCDYAASKKCNLQYHIKSRH 432
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K S+ L + PC RP + C C Y + ++ H H G+K FK
Sbjct: 300 KTLDSASAPLRKRDVSSRPCGERP------YQCGLCPYSSSQKTHLTRHMRTHSGEKPFK 353
Query: 117 CCLCSYGAYQKEKLQFHVKNKHS 139
C C Y A + ++ H + H+
Sbjct: 354 CDQCIYVASNQHEVTRHARQVHN 376
>gi|297292851|ref|XP_002804152.1| PREDICTED: RE1-silencing transcription factor-like [Macaca mulatta]
Length = 1187
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 360 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 418
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C ++ +S+ + + H+ P P+ C CDY T
Sbjct: 419 RHMRTHSGEKPFKCDQC-SYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 471
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 472 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 512
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 374 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 428
>gi|426344417|ref|XP_004038766.1| PREDICTED: RE1-silencing transcription factor [Gorilla gorilla
gorilla]
Length = 1114
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 295 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 353
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C ++ +S+ + + H+ P P+ C CDY T
Sbjct: 354 RHMRTHSGEKPFKCDQC-SYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 406
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 407 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 447
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 309 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 363
>gi|432961017|ref|XP_004086534.1| PREDICTED: RE1-silencing transcription factor-like [Oryzias
latipes]
Length = 871
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 67/164 (40%), Gaps = 39/164 (23%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTS 61
HW + L +K TC C+ Y +I H +T V P C +C +++S
Sbjct: 267 HWRKHLRNHFPSKLHTCSQCS-YFSDRKSNYIQHIRT------HTGVRPFQCVYC-DYSS 318
Query: 62 SDVNLLMEH-----------SENCPCMVR---------------PDPVKYKFICVACDYF 95
S L H E+CP + P P+ C C+Y
Sbjct: 319 SQKTHLTRHMRTHSGERPFKCESCPYLAANQHEVTRHARQVHNGPKPLS----CPYCEYK 374
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
T N + H +HL +QF C LC Y A +K LQ+H+K++HS
Sbjct: 375 TADRSNFKKHVELHLNPRQFLCPLCKYAASKKCNLQYHIKSRHS 418
>gi|410957601|ref|XP_003985414.1| PREDICTED: LOW QUALITY PROTEIN: RE1-silencing transcription factor
[Felis catus]
Length = 1077
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 293 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 351
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C ++ +S+ + + H+ P P+ C CDY T
Sbjct: 352 RHMRTHSGEKPFKCDQC-SYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 404
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 405 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 445
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 307 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 361
>gi|440853913|gb|ELR44410.1| hypothetical protein M91_13771, partial [Bos grunniens mutus]
Length = 679
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ +S+ + + H+ P P+ C CDY T N + H +H
Sbjct: 5 PFKCDQC-SYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADRSNFKKHVELH 57
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 58 VNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 88
>gi|291401761|ref|XP_002717114.1| PREDICTED: RE1-silencing transcription factor [Oryctolagus
cuniculus]
Length = 930
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ +S+ + + H+ P P+ C CDY T N + H +H
Sbjct: 330 PFKCDQC-SYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADRSNFKKHVELH 382
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 383 VNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 329
>gi|260819572|ref|XP_002605110.1| hypothetical protein BRAFLDRAFT_84220 [Branchiostoma floridae]
gi|229290441|gb|EEN61120.1| hypothetical protein BRAFLDRAFT_84220 [Branchiostoma floridae]
Length = 1269
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C+ +T S+ L H + D +Y +C C Y ++ H L H
Sbjct: 520 PYKCEECE-YTCSEKGRLDAHRR-----IHGDSKQY--LCPDCGYSCKWPNQLKTHQLTH 571
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
G+K KC CS+ A QK LQ H+++KH
Sbjct: 572 TGEKPHKCPWCSFAARQKSNLQSHIQSKH 600
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P SC C +F + L EH ++ R C C Y T + M H +H
Sbjct: 464 PLSCNSC-DFQVASPAALKEHRKDAHGQAR-------LQCEQCPYSTPYHKKMEVHKRVH 515
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFH 133
G+K +KC C Y +K +L H
Sbjct: 516 SGEKPYKCEECEYTCSEKGRLDAH 539
>gi|260795192|ref|XP_002592590.1| hypothetical protein BRAFLDRAFT_68913 [Branchiostoma floridae]
gi|229277811|gb|EEN48601.1| hypothetical protein BRAFLDRAFT_68913 [Branchiostoma floridae]
Length = 408
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M V P C HC+ ++S++ L +H M R K ++C C Y T
Sbjct: 148 HMRRHTGVKPYKCDHCE-YSSAENRDLNKH------MARHTGEK-PYMCGECGYRTADRS 199
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
++ H H G+K +KC LC Y A +K L HV KH++
Sbjct: 200 SLAVHLRTHTGEKPYKCGLCDYSAAKKGNLDRHVTGKHTS 239
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC LC Y A +K+ L H+
Sbjct: 299 YMCGECGYRTAYRSSLVVHLRTHTGEKPYKCALCDYSAAKKDNLDRHM 346
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D ++ +H+ N P +C C Y T ++ H H G+K ++C +C Y
Sbjct: 230 DRHVTGKHTSNRP-----------HLCEECGYRTTNKSHLSRHMRSHTGEKLYRCDVCDY 278
Query: 123 GAYQKEKLQFHV 134
A +K L HV
Sbjct: 279 SAAKKSYLDKHV 290
>gi|261289261|ref|XP_002603073.1| hypothetical protein BRAFLDRAFT_196104 [Branchiostoma floridae]
gi|229288390|gb|EEN59085.1| hypothetical protein BRAFLDRAFT_196104 [Branchiostoma floridae]
Length = 358
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 37 QTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFT 96
Q +M P C+HC +++++ +LL +H+ +R K ++C C+Y T
Sbjct: 21 QLLRHMKTHTGEKPYKCEHC-DYSAAQKSLLDKHA------MRKHSGKKPYLCGQCEYRT 73
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ ++ H H +K KC C Y A QK +L H+ KH+
Sbjct: 74 AVKSDLSQHMRTHTDEKPHKCDQCDYSAVQKAQLDKHIMTKHT 116
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T + + H H G+K +KC C Y A +K+KL HV+ KH+
Sbjct: 155 YMCEDCGFRTAVRATLITHRRKHTGEKPYKCDQCDYSAARKDKLDQHVRLKHT 207
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F+C C Y + + H H G+K +KC C Y A QK L H KHS K
Sbjct: 7 FMCEDCGYRAALKYQLLRHMKTHTGEKPYKCEHCDYSAAQKSLLDKHAMRKHSGK 61
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H H G+K KC LC Y A QK L H+ KH+
Sbjct: 301 YMCEECGYRTAHRNALARHMKNHTGEKAHKCDLCDYSAAQKGTLDTHIMAKHT 353
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 87 FICVACDYFTIISQNMRNHT-LIHLGDKQ---FKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CDY + H L H G+K FKC C Y A +KE L+ H++ +H+
Sbjct: 183 YKCDQCDYSAARKDKLDQHVRLKHTGEKPYMVFKCDQCDYSAKRKEGLERHIRARHT 239
>gi|47212016|emb|CAF95422.1| unnamed protein product [Tetraodon nigroviridis]
Length = 449
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 14/122 (11%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
CLYC+ Y S H +T + P C+ C N+ +++ + + H+
Sbjct: 311 CLYCD-YSSSQKTHLTRHMRT------HSGERPFKCESC-NYLAANQHEVTRHARQVHNG 362
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+P C CDY T N + H +HL +QF C LC Y A +K LQ+H+K++
Sbjct: 363 PKP------LSCPYCDYKTADRSNYKKHVELHLNPRQFLCPLCKYAASKKCNLQYHIKSR 416
Query: 138 HS 139
H+
Sbjct: 417 HA 418
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 52 SCKHCKNFTSSDVNLLME---HSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
+C C F+ N + H+ +C VRP F C+ CDY + ++ H
Sbjct: 280 TCSQCSYFSDRKSNYIQHIRTHTGDC---VRP------FQCLYCDYSSSQKTHLTRHMRT 330
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G++ FKC C+Y A + ++ H + H+
Sbjct: 331 HSGERPFKCESCNYLAANQHEVTRHARQVHN 361
>gi|334331335|ref|XP_001369959.2| PREDICTED: RE1-silencing transcription factor [Monodelphis
domestica]
Length = 940
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C N+ +S+ + + H+ +P C CDY T N + H +H
Sbjct: 335 PFKCEQC-NYVASNQHEVTRHARQVHNGPKP------LTCPHCDYKTADRSNFKKHVELH 387
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ +QF C +C Y A +K LQ+H+K++HS
Sbjct: 388 VNPRQFLCPVCDYAASKKCNLQYHIKSRHS 417
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C YF+ N H H G++ ++C +C Y + QK L H++
Sbjct: 280 YTCSQCSYFSDRKNNYIQHIRTHTGERPYQCVMCPYSSSQKTHLTRHMR 328
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ CV C Y + ++ H H G+K FKC C+Y A + ++ H + H+
Sbjct: 308 YQCVMCPYSSSQKTHLTRHMRTHSGEKPFKCEQCNYVASNQHEVTRHARQVHN 360
>gi|395517547|ref|XP_003762937.1| PREDICTED: zinc finger protein 26-like [Sarcophilus harrisii]
Length = 638
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 17 TCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPC 76
TC CN+ S + + +M V P C+HC T +L+
Sbjct: 494 TCKICNRKCSSKLALQ-------RHMGIHAGVKPFHCQHCDYKTRLKASLIQH------- 539
Query: 77 MVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+R + F C C Y +I + ++R H H ++ +KC LCSY + QK+ L HV+
Sbjct: 540 -MRIHTGEKPFKCEVCSYASIDASSLRRHFRTHTRERPYKCQLCSYSSIQKKSLDLHVRR 598
Query: 137 KHSTKV 142
H+ +
Sbjct: 599 HHTGET 604
>gi|260811181|ref|XP_002600301.1| hypothetical protein BRAFLDRAFT_118280 [Branchiostoma floridae]
gi|229285587|gb|EEN56313.1| hypothetical protein BRAFLDRAFT_118280 [Branchiostoma floridae]
Length = 1010
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 21/142 (14%)
Query: 5 EQCLLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK---NFTS 61
+ L V L+ C +C P Q +M P C C
Sbjct: 7 QDALDVALAASHRCYHCKYSAPYK-------SQLTRHMRKHTGEKPFKCDQCDYSAALKG 59
Query: 62 SDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCS 121
S +N + +H+ P + C CDY N+ NH H G+K FKC C
Sbjct: 60 SLINHMRQHTGERP-----------YKCDQCDYSAAQKGNLDNHMRKHTGEKPFKCGQCD 108
Query: 122 YGAYQKEKLQFHVKNKHSTKVK 143
Y A + L +H+ +KH+ K++
Sbjct: 109 YSAAHQSSLDYHIMSKHTGKME 130
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C + S +N + +H+ P + C CDY N+ NH H G+
Sbjct: 181 CDYSAALKGSLINHMRQHTGERP-----------YKCDQCDYSAAQKGNLDNHMRKHTGE 229
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHS 139
K FKC C Y A + L +H+ +KH+
Sbjct: 230 KPFKCGQCDYSAAHQSSLDYHIMSKHT 256
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C CDY N+ H H G+K +KC LC Y A +K L H+ KH+
Sbjct: 317 FKCDQCDYSAAQKCNLDQHMRKHTGEKPYKCDLCDYSAAKKGSLDHHIMRKHT 369
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ + IC+ CDY T +++ H H G+K +KC C + A +K+ L H+
Sbjct: 660 AEKRLICIECDYRTTSKRDLVRHARTHTGEKPYKCDQCDFSAARKDHLNRHM 711
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
C+ C+ S D+ + H +T P C C +F+++ + L H M
Sbjct: 666 CIECDYRTTSKRDL-VRHART------HTGEKPYKCDQC-DFSAARKDHLNRH------M 711
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ VK ++C CDY T+ ++ H IH G+K +KC C Y + +K L H+
Sbjct: 712 FQHSGVK-PYMCGDCDYRTVRKSDLATHMAIHTGEKPYKCGKCDYSSVRKNALNKHL 767
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY + ++ NH H G++ +KC C Y A QK L H++
Sbjct: 176 FKCDQCDYSAALKGSLINHMRQHTGERPYKCDQCDYSAAQKGNLDNHMR 224
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEH-------SENCPCMVRPDPVKYKFICVACD 93
+M+ P C C +++S N L +H +E+ +V+ K +F C CD
Sbjct: 738 HMAIHTGEKPYKCGKC-DYSSVRKNALNKHLSIHSREAEHSGRLVKRTKEK-RFACEKCD 795
Query: 94 YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ +++ HT H G+K KC C Y A + L+ H+ KHS
Sbjct: 796 FKASAKKDLSRHTRTHTGEKPHKCDQCDYSAAHEFYLKLHMA-KHS 840
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQN 101
MS P C C T+ NL + +R + + C CDY +
Sbjct: 252 MSKHTGERPYKCNQCDFSTAQKGNLDLH--------MRKHTGEKPYKCDQCDYSAAQKGH 303
Query: 102 MRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ +H H G+K FKC C Y A QK L H++
Sbjct: 304 LDHHMRKHTGEKPFKCDQCDYSAAQKCNLDQHMR 337
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 60 TSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL 119
+S D +++ +H+ P + C CD+ T N+ H H G+K +KC
Sbjct: 245 SSLDYHIMSKHTGERP-----------YKCNQCDFSTAQKGNLDLHMRKHTGEKPYKCDQ 293
Query: 120 CSYGAYQKEKLQFHVK 135
C Y A QK L H++
Sbjct: 294 CDYSAAQKGHLDHHMR 309
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
+IC C + T ++ H IH GDK +KC C Y + +K L H K+KHS +
Sbjct: 594 YICGECGHRTAHRSDLTKHMRIHSGDKPYKCDKCDYSSVRKCDLDKH-KSKHSRET 648
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+C C Y T + H H G+K +KC CSY A QK KL H
Sbjct: 903 LCWECGYRTSNRSGLNKHMRTHTGEKPYKCDQCSYCAAQKGKLDRH 948
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 57 KNFTSSDVNLLMEHSEN--CPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQ 114
KNFT+++++ + + +P + ++ C CDY ++ H H G+K
Sbjct: 534 KNFTNTELDFRTASKSDIFGHALAKPHAGEKRYTCDQCDYSAARKDSLDRHIAKHTGEKP 593
Query: 115 FKCCLCSYGAYQKEKLQFHVK 135
+ C C + + L H++
Sbjct: 594 YICGECGHRTAHRSDLTKHMR 614
>gi|606946|gb|AAA64268.1| neural-restrictive silencer factor, partial [Mus musculus]
Length = 522
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 31/161 (19%)
Query: 3 HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
HW + L K TC CN Y + ++ H C+ CP
Sbjct: 182 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 240
Query: 41 -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M + P C C N+ +S+ + + H+ +P C CDY T
Sbjct: 241 RHMRTHSGEKPFKCDEC-NYVASNQHEVTRHARQVHNGPKP------LNCPHCDYKTADR 293
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 294 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 334
>gi|261289393|ref|XP_002603140.1| hypothetical protein BRAFLDRAFT_63227 [Branchiostoma floridae]
gi|229288456|gb|EEN59151.1| hypothetical protein BRAFLDRAFT_63227 [Branchiostoma floridae]
Length = 430
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++CV C Y T I N+ H H G+K +KC LC Y + +K KL HV N
Sbjct: 262 YMCVECGYSTAIKYNLAKHMRTHTGEKPYKCSLCDYSSTRKGKLDIHVTN 311
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
NFT+ L EH M R K F C C + T Q++ H + H GDK KC
Sbjct: 16 NFTAIRKEALKEH------MTRHTEEK-PFRCDTCGFRTAYKQSLSQHMIRHTGDKPHKC 68
Query: 118 CLCSYGAYQKEKLQFHV 134
C Y A K++L+ H
Sbjct: 69 DQCEYSATTKDRLKRHT 85
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P +C C + +++ N+L +H +R + + C C+Y +I ++N+ +H H
Sbjct: 205 PYTCGQC-GYRAAEKNILSKH-------MRTHTGEKTYKCTLCEYSSIYNRNLVSHMAKH 256
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K + C C Y K L H++
Sbjct: 257 TGEKPYMCVECGYSTAIKYNLAKHMR 282
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K + + + + N +R + + C CD+ T + +++ HT H G+K F
Sbjct: 92 KPYKCGECGFRLAYRSNLSKHMRTHTGEKHYKCTECDFKTSLKDSLKRHTARHTGEKPFM 151
Query: 117 CCLCSYGAYQKEKLQFHV 134
C C Y K H+
Sbjct: 152 CDKCGYRTAHKTSFSHHM 169
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C F ++D + L H +R + + C C+Y + Q++ H + H
Sbjct: 317 PYKCDEC-GFKTADKHYLTVH-------MRTHTGEKPYNCSFCEYSSAFKQSLVRHMVNH 368
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K F C C +G K L H++
Sbjct: 369 TGEKPFLCEECGFGTASKSSLIRHIR 394
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C CD+ T + +R H H+G K + C C Y A +K L H++
Sbjct: 180 CDKCDFKTNTREGLRRHKAKHIGKKPYTCGQCGYRAAEKNILSKHMR 226
>gi|260832626|ref|XP_002611258.1| hypothetical protein BRAFLDRAFT_71213 [Branchiostoma floridae]
gi|229296629|gb|EEN67268.1| hypothetical protein BRAFLDRAFT_71213 [Branchiostoma floridae]
Length = 238
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
V +F+C CDY T N+ HT H G+K +KC C Y A QK L H+
Sbjct: 70 VDKRFVCTECDYRTASKANLVKHTRTHTGEKPYKCEQCDYSAAQKGTLGLHL 121
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
F+C C Y T N+ H H G+K +KC C Y + K +L+ H+ +KH++
Sbjct: 186 FMCGECGYRTDRKSNLSRHMRKHTGEKPYKCDQCDYSSIDKRRLKKHL-DKHTS 238
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 22/47 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
F+C C Y T + H H G K +KC LC Y A QK L H
Sbjct: 130 FMCGQCGYRTANRSYLSVHMRSHTGVKPYKCDLCDYSAAQKGHLDDH 176
>gi|260783253|ref|XP_002586691.1| hypothetical protein BRAFLDRAFT_105497 [Branchiostoma floridae]
gi|229271813|gb|EEN42702.1| hypothetical protein BRAFLDRAFT_105497 [Branchiostoma floridae]
Length = 372
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + +++ + L H +R + + C CDY N+ NH L H
Sbjct: 32 PYMCGEC-GYKTAESSHLFRH-------MRTHTGERPYKCGQCDYSAAQKSNLGNHLLTH 83
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K FKC C Y A QK L H KH+
Sbjct: 84 TGEKPFKCDQCDYSAAQKRTLNIHTAAKHT 113
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y N+ H H G FKC C Y A QK L +H+ +KH+
Sbjct: 231 YMCGECGYRAAQRSNLSQHMRRHTGKGTFKCDQCDYYAAQKTNLDYHIASKHT 283
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T ++ H H G FKC C Y A QK L +H+ KH+
Sbjct: 118 YMCGECGFRTTQRSSLSQHMRRHTGKGTFKCDQCDYSAVQKANLDYHIAAKHT 170
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+ C CDYF ++ NH L H G+K FKC C + A QK L H
Sbjct: 175 YKCDQCDYFAAKKSHLYNHLLTHTGEKPFKCDQCDFSAAQKINLVTH 221
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
V+ ++C C Y T S ++ H H G++ +KC C Y A QK L H+
Sbjct: 29 VEKPYMCGECGYKTAESSHLFRHMRTHTGERPYKCGQCDYSAAQKSNLGNHL 80
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T N+ H H G+K +KC C Y + L +H K KH+
Sbjct: 288 YMCGECGYRTAFKSNLSQHMRTHTGEKPYKCDQCDYSTEWRNALVYH-KAKHT 339
>gi|260832650|ref|XP_002611270.1| hypothetical protein BRAFLDRAFT_73333 [Branchiostoma floridae]
gi|229296641|gb|EEN67280.1| hypothetical protein BRAFLDRAFT_73333 [Branchiostoma floridae]
Length = 744
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
V +F+C CDY T N+ HT H G+K +KC C Y A QK L H+
Sbjct: 70 VDKRFVCTECDYRTASKANLVKHTRTHTGEKPYKCEQCDYSAAQKGTLDLHL 121
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T I N+ H IH G K +KC C Y A +K L H K KH+
Sbjct: 371 YMCGECGYRTAIRSNLTVHLRIHTGAKPYKCDQCDYSATRKSGLDKH-KAKHT 422
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F+CV C Y T N+ H IH G K +KC C + A +K L H+
Sbjct: 635 RFVCVECGYRTAHRCNLTVHLRIHTGVKPYKCDQCDFSAKKKSGLDQHM 683
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T ++ H H GDK +KC C+Y A QK L H+
Sbjct: 580 YMCGECGFRTAARYSLTLHMRSHTGDKPYKCDQCNYSATQKANLDSHM 627
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 22/47 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
F+C C Y T + H H G K +KC LC Y A QK L H
Sbjct: 130 FMCGQCGYRTANRSYLSVHMRSHTGVKPYKCDLCDYSAAQKGHLDDH 176
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F+C C Y T ++ H H G+K +KC C Y K L+ H++
Sbjct: 692 FMCGECGYRTAQRCHLSRHMTTHTGEKSYKCDQCDYSVTDKRHLKKHLE 740
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C + T ++ H H G+K +KC C+Y A QK L H
Sbjct: 315 YMCGECGFRTAARYSLTVHMRSHTGEKPYKCDQCNYSAAQKGDLNSH 361
>gi|260806378|ref|XP_002598061.1| hypothetical protein BRAFLDRAFT_85724 [Branchiostoma floridae]
gi|229283332|gb|EEN54073.1| hypothetical protein BRAFLDRAFT_85724 [Branchiostoma floridae]
Length = 483
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + +++ + L H +R + + C CDY N+ NH L H
Sbjct: 87 PYMCGEC-GYKTAESSHLFRH-------MRTHTGERPYKCDQCDYSAAQKSNLGNHLLTH 138
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K FKC C Y A QK L H KH+
Sbjct: 139 TGEKPFKCDQCDYSAAQKRTLNIHTAAKHT 168
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+IC C + T ++ H H G FKC C Y A QK L +H+ KH+ K
Sbjct: 173 YICGECGFRTTQRSSLSQHMRRHTGKGTFKCVQCDYSAVQKANLDYHIAAKHTGK 227
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y N+ H H G FKC C Y A QK L +H+ +KH+
Sbjct: 286 YMCGECGYRAAQRSNLSQHMRRHTGKGTFKCDQCDYYAAQKTNLDYHIASKHT 338
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+ C CDYF ++ NH L H G+K FKC C + A QK L H
Sbjct: 230 YKCDQCDYFAAKKAHLYNHLLTHTGEKPFKCDQCDFSAAQKINLVTH 276
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
V+ ++C C Y T S ++ H H G++ +KC C Y A QK L H+
Sbjct: 84 VEKPYMCGECGYKTAESSHLFRHMRTHTGERPYKCDQCDYSAAQKSNLGNHL 135
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ NH H G+K +KC C Y K L H+
Sbjct: 343 YMCGECGYRTARKANLSNHMRSHTGEKPYKCDQCDYSTAWKSSLNQHL 390
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T N+ H H G+K +KC C Y + L +H K KH+
Sbjct: 399 YMCGECGYRTAFKSNLSQHMRTHTGEKPYKCDQCDYSTEWRNALVYH-KAKHT 450
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C T+ NL +R + + C CDY T ++ H +IH
Sbjct: 342 PYMCGECGYRTARKANLSNH--------MRSHTGEKPYKCDQCDYSTAWKSSLNQHLVIH 393
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K + C C Y K L H++
Sbjct: 394 TGEKPYMCGECGYRTAFKSNLSQHMR 419
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI- 108
P C C F ++ + L +H +R K F CV CDY + N+ H
Sbjct: 172 PYICGEC-GFRTTQRSSLSQH-------MRRHTGKGTFKCVQCDYSAVQKANLDYHIAAK 223
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G K +KC C Y A +K L H+
Sbjct: 224 HTGKKPYKCDQCDYFAAKKAHLYNHL 249
>gi|260832622|ref|XP_002611256.1| hypothetical protein BRAFLDRAFT_147455 [Branchiostoma floridae]
gi|229296627|gb|EEN67266.1| hypothetical protein BRAFLDRAFT_147455 [Branchiostoma floridae]
Length = 297
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
V +F+C CDY T N+ HT H G+K +KC C Y A QK L H+
Sbjct: 11 VDKRFVCTECDYRTASKANLVKHTRTHTGEKPYKCEQCDYSAAQKGTLDLHL 62
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C C + T ++ H H G+K +KC C Y A +K L H+
Sbjct: 184 FKCGECGFRTAFKSSLATHIKKHTGEKPYKCDQCDYSAAEKSSLDRHM 231
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 22/47 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
F+C C Y T + H H G K +KC +C Y A QK L H
Sbjct: 71 FMCGQCGYRTANRSYLSVHMRSHTGVKPYKCDMCDYSAAQKGHLDDH 117
>gi|260786739|ref|XP_002588414.1| hypothetical protein BRAFLDRAFT_63363 [Branchiostoma floridae]
gi|229273576|gb|EEN44425.1| hypothetical protein BRAFLDRAFT_63363 [Branchiostoma floridae]
Length = 2358
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
C C+ Y ++ DV + H + P C C +F++ L +H +
Sbjct: 2022 CWKCD-YRATEKDVLLEHVKEHTGQK------PYKCDQC-DFSAEQKGDLDQH------V 2067
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
V V+ F C C Y T I ++ H H G+K +KC C Y A QK +L HV K
Sbjct: 2068 VLKHDVEKPFECRECGYRTAIKSHLSRHIKTHTGEKPYKCDQCDYSAAQKGRLDEHVIAK 2127
Query: 138 HSTK 141
H+ +
Sbjct: 2128 HTNE 2131
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 17/96 (17%)
Query: 50 PQSCKHCKNFTSS-----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRN 104
P C +C ++TS+ D ++++ H+ P ++C C Y T + ++
Sbjct: 1041 PFKCGYC-DYTSTGRHNRDRHVMIHHTGEKP-----------YMCGECGYRTAVKSSLAR 1088
Query: 105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
H H G+K +KC C Y A QK L HV+ KHS+
Sbjct: 1089 HMKTHTGEKPYKCDQCDYSAVQKSHLDEHVRTKHSS 1124
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T N+ NH IH G+K +KC LC Y A ++ L H + KH+
Sbjct: 1224 YVCEDCGYRTAKIGNLSNHRRIHTGEKPYKCDLCDYSAARRHHLDQH-RAKHT 1275
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++ L EH +P ++C C+Y T ++ H H
Sbjct: 1601 PYKCDQC-DYSAAQKGHLDEHVITKHTGEKP------YMCEDCEYRTAYKHHLSQHKRKH 1653
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K FKC C Y A QK L HV KH+
Sbjct: 1654 TGEKPFKCDQCDYSAAQKGHLDEHVMVKHN 1683
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T+ + H H G+K +KC C Y A QK L HV KH+
Sbjct: 1574 YMCEDCGYRTVTMYRLSQHKRKHTGEKPYKCDQCDYSAAQKGHLDEHVITKHT 1626
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++ L EH MV+ + K ++C C Y T N+ H H
Sbjct: 2161 PYKCDQC-DYSAAQKGHLDEH-----IMVKHNDEK-PYMCEDCGYKTANRWNLSQHRRTH 2213
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
GDK +KC C Y A +K L H+
Sbjct: 2214 TGDKPYKCDHCDYSAARKHHLSQHM 2238
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T S N+ H H G+K +KC C+Y A +K L+ H+
Sbjct: 1688 FMCDVCGYRTANSWNLSQHRKKHTGEKPYKCDQCNYSALRKHHLKQHM 1735
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++ L EH ++ + ++C C + T ++ H H
Sbjct: 2104 PYKCDQC-DYSAAQKGRLDEH------VIAKHTNEKPYVCEDCGFKTATKHHLSQHKRKH 2156
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y A QK L H+ KH+
Sbjct: 2157 TGEKPYKCDQCDYSAAQKGHLDEHIMVKHN 2186
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 17/91 (18%)
Query: 48 VIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL 107
V+PQ+ + F + N + EH+ +IC CDY + H
Sbjct: 1998 VLPQTAAQSQTF--QEGNHVAEHT---------------YICWKCDYRATEKDVLLEHVK 2040
Query: 108 IHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
H G K +KC C + A QK L HV KH
Sbjct: 2041 EHTGQKPYKCDQCDFSAEQKGDLDQHVVLKH 2071
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T S N+ H H GDK F C C Y +K L H+
Sbjct: 1168 FVCDECGYRTAKSWNLSMHKRKHTGDKPFACDQCDYSTTRKNHLDQHM 1215
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 24/52 (46%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
IC C Y + H H G+K FKC C Y A QK L H+ KH+
Sbjct: 1518 ICKDCGYRAPCEAKLTLHVRTHTGEKPFKCNQCDYSAAQKGHLDEHIIIKHT 1569
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 23/113 (20%)
Query: 40 PNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPV---------------- 83
P NS I Q+ +TS ++L E + C+ D V
Sbjct: 812 PTHYLGNSSIEQTT-----YTSLQQDVLSEEMSDVNCIGYDDEVLPQTTIQSHIEQEGRH 866
Query: 84 --KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ FIC C Y + H H G+K +KC C Y A +K L+ H+
Sbjct: 867 MTQHTFICWQCGYRATQRDILLEHMKEHTGEKPYKCDQCDYSAVRKHHLEQHM 919
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+IC C Y T I + H H G+K +KC C Y + K L HV KH+
Sbjct: 956 YICEECGYRTAIMAQLTIHKRKHTGEKLYKCDQCDYSSIWKCNLDQHVMLKHA 1008
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C + ++ L +H C P F C CDY + N H +IH
Sbjct: 1012 PYLCEDC-GYKTASRRHLSKHKTTCKGERGP------FKCGYCDYTSTGRHNRDRHVMIH 1064
Query: 110 -LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K + C C Y K L H+K
Sbjct: 1065 HTGEKPYMCGECGYRTAVKSSLARHMK 1091
>gi|74224314|dbj|BAE33741.1| unnamed protein product [Mus musculus]
Length = 519
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C N+ +S+ + + H+ +P C CDY T N + H +H
Sbjct: 326 PFKCDQC-NYVASNQHEVTRHARQVHNGPKP------LNCPHCDYKTADRSNFKKHVELH 378
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 379 VNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 409
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 271 YTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 319
>gi|405949966|gb|EKC17976.1| Zinc finger protein 64-like protein, isoforms 1 and 2 [Crassostrea
gigas]
Length = 639
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C CDY T+ +++ H IH G+K FKC C Y Q L+ H+K H
Sbjct: 549 FKCQQCDYSTVERSHLKVHIRIHTGEKPFKCTFCEYATAQNSTLKIHLKRHHG 601
>gi|66396491|gb|AAH96434.1| Rest protein, partial [Mus musculus]
Length = 525
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C N+ +S+ + + H+ +P C CDY T N + H +H
Sbjct: 326 PFKCDQC-NYVASNQHEVTRHARQVHNGPKP------LNCPHCDYKTADRSNFKKHVELH 378
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 379 VNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 409
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 271 YTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 319
>gi|91086855|ref|XP_974363.1| PREDICTED: similar to CG1233 CG1233-PB [Tribolium castaneum]
gi|270009694|gb|EFA06142.1| hypothetical protein TcasGA2_TC008986 [Tribolium castaneum]
Length = 497
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 48 VIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL 107
+ P C +C SS +L M +R + F C +C Y T ++R H L
Sbjct: 377 IKPFLCNYCGYKGSSRSSLKMH--------IRQHTGEKPFTCDSCSYATSDHNSLRRHKL 428
Query: 108 IHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
H G K +KC CSY Q + H+K KH + KD
Sbjct: 429 RHTGQKPYKCSYCSYACIQSSTYKVHIKTKHPGQEKD 465
>gi|344247352|gb|EGW03456.1| RE1-silencing transcription factor [Cricetulus griseus]
Length = 1047
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T +
Sbjct: 340 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPTSL 393
>gi|338723599|ref|XP_001916846.2| PREDICTED: LOW QUALITY PROTEIN: RE1-silencing transcription
factor-like [Equus caballus]
Length = 1039
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|301616291|ref|XP_002937593.1| PREDICTED: RE1-silencing transcription factor A [Xenopus (Silurana)
tropicalis]
Length = 1391
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C CDY T N + H +H+ +QF C +C Y A +K LQ+H+K++HS
Sbjct: 356 LTCPHCDYKTADRSNFKKHVELHVNPRQFLCPVCDYAASKKCNLQYHIKSRHS 408
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C YF+ N H H G++ ++C +C Y + QK L H++ K
Sbjct: 271 YTCSQCSYFSDRKNNYIQHIRTHTGERPYQCIICPYSSSQKTHLTRHMRTHSGEK 325
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C+ C Y + ++ H H G+K FKC CSY A + ++ H + H+
Sbjct: 299 YQCIICPYSSSQKTHLTRHMRTHSGEKPFKCEQCSYVASNQHEVTRHARQVHN 351
>gi|281352497|gb|EFB28081.1| hypothetical protein PANDA_006561 [Ailuropoda melanoleuca]
Length = 1038
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|395542741|ref|XP_003773284.1| PREDICTED: RE1-silencing transcription factor A-like [Sarcophilus
harrisii]
Length = 918
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C CDY T N + H +H+ +QF C +C Y A +K LQ+H+K++HS
Sbjct: 365 LTCPHCDYKTADRSNFKKHVELHVNPRQFLCPVCDYAASKKCNLQYHIKSRHS 417
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C YF+ N H H G++ ++C +C Y + QK L H++
Sbjct: 280 YTCSQCSYFSDRKNNYIQHIRTHTGERPYQCAMCPYSSSQKTHLTRHMR 328
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C C Y + ++ H H G+K FKC CSY A + ++ H + H
Sbjct: 308 YQCAMCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEVTRHARQVH 359
>gi|344288410|ref|XP_003415943.1| PREDICTED: RE1-silencing transcription factor [Loxodonta africana]
Length = 1052
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 363 CPYCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 276 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
>gi|301765478|ref|XP_002918157.1| PREDICTED: RE1-silencing transcription factor-like [Ailuropoda
melanoleuca]
Length = 1008
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|345779728|ref|XP_539282.3| PREDICTED: RE1-silencing transcription factor [Canis lupus
familiaris]
Length = 996
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|256073469|ref|XP_002573053.1| zinc finger protein [Schistosoma mansoni]
gi|360044327|emb|CCD81874.1| putative zinc finger protein [Schistosoma mansoni]
Length = 673
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 36 CQTCPNMSFLNS------------VIPQSCKHCKNF--TSSDVNLLMEHSENCPCMVRPD 81
C +CP M + N+ V +C+ C+ F T S + L S P + +
Sbjct: 137 CPSCPAM-YANANAFTKHMREKHFVKVYTCRQCEEFFETLSQLFLHARRSHVDPKKPKRN 195
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
P +KF C C+Y T M +H H G+K F C +C+ QK ++ H +N+H
Sbjct: 196 PANFKFHCDQCNYMTNNGGTMEHHKRAHTGEKPFVCDVCNKRFAQKANMKTH-RNRH 251
>gi|348511898|ref|XP_003443480.1| PREDICTED: RE1-silencing transcription factor A-like [Oreochromis
niloticus]
Length = 973
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C+Y T N + H +HL +QF C LC Y A +K LQ+H+K++HS
Sbjct: 388 LSCPYCEYKTADRSNYKKHVELHLNPRQFLCPLCKYAASKKCNLQYHIKSRHS 440
>gi|261289265|ref|XP_002603075.1| hypothetical protein BRAFLDRAFT_198767 [Branchiostoma floridae]
gi|229288392|gb|EEN59087.1| hypothetical protein BRAFLDRAFT_198767 [Branchiostoma floridae]
Length = 321
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L EH ++R + ++C C Y T +
Sbjct: 121 HMRTHTGEKPYKCDQC-DYSAAQKSRLNEH------IMRKHTGEKPYMCDKCGYRTAVKA 173
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H GDKQ+KC C Y A QK L H+ KH+
Sbjct: 174 HLSRHLNTHPGDKQYKCDQCDYSAVQKWYLDQHIMTKHT 212
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T S ++ H H GDKQ KC LC Y A QK L HV KH+
Sbjct: 217 YLCWECGYKTANSSHLYRHMKTHSGDKQHKCLLCDYSAVQKRHLNEHVMAKHT 269
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+C C Y T ++ H H G+K +KC C Y A QK +L H+ KH+
Sbjct: 104 VCGECGYRTADRSHLSQHMRTHTGEKPYKCDQCDYSAAQKSRLNEHIMRKHT 155
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ C Y T I ++ H H G+KQ+KC C Y A +K L H+ KH+
Sbjct: 46 YMRGQCGYKTAIRSHLSRHLNTHPGEKQYKCDQCDYSAVEKGYLDHHIMTKHT 98
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T +S ++ H H G++ +KC C Y A QK L H
Sbjct: 274 YMCGVCGYRTALSSSLSRHKRTHTGERPYKCDQCDYSAAQKGTLDQH 320
>gi|1142657|gb|AAA98503.1| X2 box repressor [Homo sapiens]
Length = 1088
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 329
>gi|395734951|ref|XP_002814806.2| PREDICTED: RE1-silencing transcription factor [Pongo abelii]
Length = 1097
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 363 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 276 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 330
>gi|260821625|ref|XP_002606133.1| hypothetical protein BRAFLDRAFT_88044 [Branchiostoma floridae]
gi|229291471|gb|EEN62143.1| hypothetical protein BRAFLDRAFT_88044 [Branchiostoma floridae]
Length = 477
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
F+C C Y T N NH H G+K +KC C Y A K L +H + KH+ + +
Sbjct: 260 FVCKKCAYKTAYRSNFSNHMRTHTGEKPYKCDQCDYSARSKSALGYHARTKHTREKR 316
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y T+ ++ H H G+K +KC C Y A QK L H+ KHS
Sbjct: 397 FMCGECGYRTVHKSHLSRHMRTHSGEKPYKCHQCDYSAVQKSGLDHHL-AKHS 448
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C Y T + + H H G+K +KC C Y A +K L +H + +HS
Sbjct: 19 YTCAVCGYRTAVRSYLLRHMRTHTGEKPYKCDQCDYSAAEKSTLNYH-QTRHS 70
>gi|89269839|emb|CAJ81614.1| RE1-silencing transcription factor [Xenopus (Silurana) tropicalis]
Length = 445
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C ++ +S+ + + H+ +P C CDY T N + H +H
Sbjct: 326 PFKCEQC-SYVASNQHEVTRHARQVHNGPKP------LTCPHCDYKTADRSNFKKHVELH 378
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ +QF C +C Y A +K LQ+H+K++HS
Sbjct: 379 VNPRQFLCPVCDYAASKKCNLQYHIKSRHS 408
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C YF+ N H H G++ ++C +C Y + QK L H++
Sbjct: 271 YTCSQCSYFSDRKNNYIQHIRTHTGERPYQCIICPYSSSQKTHLTRHMR 319
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 52 SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
+C C F+ N + +R + + C+ C Y + ++ H H G
Sbjct: 272 TCSQCSYFSDRKNNYIQH--------IRTHTGERPYQCIICPYSSSQKTHLTRHMRTHSG 323
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+K FKC CSY A + ++ H + H+
Sbjct: 324 EKPFKCEQCSYVASNQHEVTRHARQVHN 351
>gi|124376608|gb|AAI32860.1| RE1-silencing transcription factor [Homo sapiens]
Length = 1097
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 363 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 276 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
>gi|301897974|ref|NP_005603.3| RE1-silencing transcription factor [Homo sapiens]
gi|301897977|ref|NP_001180437.1| RE1-silencing transcription factor [Homo sapiens]
gi|296452989|sp|Q13127.3|REST_HUMAN RecName: Full=RE1-silencing transcription factor; AltName:
Full=Neural-restrictive silencer factor; AltName:
Full=X2 box repressor
gi|119625922|gb|EAX05517.1| RE1-silencing transcription factor, isoform CRA_b [Homo sapiens]
gi|168277848|dbj|BAG10902.1| RE1-silencing transcription factor [synthetic construct]
gi|223460852|gb|AAI36492.1| RE1-silencing transcription factor [Homo sapiens]
Length = 1097
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 363 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 276 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
>gi|1621501|gb|AAB17211.1| REST protein [Homo sapiens]
Length = 1097
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 363 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 276 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
>gi|355749386|gb|EHH53785.1| Neural-restrictive silencer factor [Macaca fascicularis]
Length = 1095
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 363 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 276 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
>gi|119361501|sp|Q2EI21.1|RESTA_XENLA RecName: Full=RE1-silencing transcription factor A; AltName:
Full=Neural-restrictive silencer factor A
gi|87204323|gb|ABD32117.1| RE-1 silencer of transcription [Xenopus laevis]
Length = 1501
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C CDY T N + H +H+ +QF C +C Y A +K LQ+H+K++HS
Sbjct: 359 LTCPHCDYKTADRSNFKKHVELHVNPRQFLCPVCDYAASKKCNLQYHIKSRHS 411
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C YF+ N H H G++ ++C +C Y + QK L H++ K
Sbjct: 274 YTCSQCSYFSDRKNNYIQHIRTHTGERPYQCIICLYSSSQKTHLTRHMRTHSGEK 328
>gi|355687404|gb|EHH25988.1| Neural-restrictive silencer factor [Macaca mulatta]
Length = 1095
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 363 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 276 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
>gi|431893875|gb|ELK03692.1| RE1-silencing transcription factor [Pteropus alecto]
Length = 967
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|397469833|ref|XP_003806544.1| PREDICTED: RE1-silencing transcription factor [Pan paniscus]
Length = 1097
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 363 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 276 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
>gi|332238531|ref|XP_003268454.1| PREDICTED: RE1-silencing transcription factor isoform 1 [Nomascus
leucogenys]
gi|332238533|ref|XP_003268455.1| PREDICTED: RE1-silencing transcription factor isoform 2 [Nomascus
leucogenys]
gi|332238535|ref|XP_003268456.1| PREDICTED: RE1-silencing transcription factor isoform 3 [Nomascus
leucogenys]
Length = 1097
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 363 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 276 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
>gi|260806225|ref|XP_002597985.1| hypothetical protein BRAFLDRAFT_79782 [Branchiostoma floridae]
gi|229283255|gb|EEN53997.1| hypothetical protein BRAFLDRAFT_79782 [Branchiostoma floridae]
Length = 603
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M S P +C+ C ++++ ++ L +H N P F C CDY T+ Q
Sbjct: 56 HMVIHTSEKPYNCELC-GYSAAKMSYLKKHMAN---HTGDKP----FCCELCDYSTVRKQ 107
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+R H H GDK KC LC Y K+ L+ H+
Sbjct: 108 NLRRHITKHTGDKPHKCELCDYSTAVKKDLKRHI 141
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ P C+HC +F+++ L H P K C CDY T
Sbjct: 426 HMAIHTGEKPFRCEHC-DFSTARKQDLKRHVAR---HTGDKPHK----CELCDYSTAHRS 477
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+M+ H + H G+K +KC +C Y A Q L+ H+
Sbjct: 478 HMKRHMITHTGEKPYKCEICEYAAAQISSLRAHM 511
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C CDY T + ++++ H H G+K +KC +CSY A K L+ H+
Sbjct: 124 CELCDYSTAVKKDLKRHIATHTGEKPYKCDVCSYAAADKRYLRDHM 169
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI-HLGDKQFK 116
++ ++D L +H M + K F C CDYF N+ HT+ H G+K K
Sbjct: 156 SYAAADKRYLRDH------MTKHTGEK-PFQCEECDYFAATKGNLAAHTMARHSGEKPHK 208
Query: 117 CCLCSYGAYQKEKLQFHV 134
C +C Y A K L+ H+
Sbjct: 209 CEVCGYAAALKGGLRQHM 226
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI-HLGDKQFK 116
+++ L EH +RP C CD+ ++ ++++ H + H G+K +
Sbjct: 300 EYSAQQSGHLTEHVMAKHSNIRPHK------CTLCDFSSVTKKSLKRHIMTNHTGEKPYS 353
Query: 117 CCLCSYGAYQKEKLQFHV 134
C LCSY A +K L+ H+
Sbjct: 354 CELCSYAASEKSLLKLHM 371
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C Y + +R+H H G+K F+C C Y A K L H +HS
Sbjct: 150 YKCDVCSYAAADKRYLRDHMTKHTGEKPFQCEECDYFAATKGNLAAHTMARHS 202
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P SC+ C ++ +S+ +LL H M + K + C CDY + + +H +IH
Sbjct: 9 PYSCELC-SYAASEKSLLKLH------MAKHTGEK-PYKCKMCDYSSAKKGCLNSHMVIH 60
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+K + C LC Y A + L+ H+ N
Sbjct: 61 TSEKPYNCELCGYSAAKMSYLKKHMAN 87
>gi|82118353|sp|Q9PVG3.1|RESTB_XENLA RecName: Full=RE1-silencing transcription factor B; AltName:
Full=Neural-restrictive silencer factor B
gi|6288730|gb|AAF06720.1|AF096301_1 REST, partial [Xenopus laevis]
Length = 529
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C ++ +S+ + + H+ +P C CDY T N + H +H
Sbjct: 327 PFKCEQC-SYVASNQHEVTRHARQVHNGPKP------LTCPHCDYKTADRSNFKKHVELH 379
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ +QF C +C Y A +K LQ+H+K++HS
Sbjct: 380 VNPRQFLCPVCDYAASKKCNLQYHIKSRHS 409
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C YF+ N H H G++ ++C LC Y + QK L H++
Sbjct: 272 YTCSQCSYFSDRKNNYIQHIRTHTGERPYQCILCPYSSSQKTHLTRHMR 320
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+R + + C+ C Y + ++ H H G+K FKC CSY A + ++ H +
Sbjct: 291 IRTHTGERPYQCILCPYSSSQKTHLTRHMRTHSGEKPFKCEQCSYVASNQHEVTRHARQV 350
Query: 138 HS 139
H+
Sbjct: 351 HN 352
>gi|332819700|ref|XP_526617.3| PREDICTED: RE1-silencing transcription factor isoform 2 [Pan
troglodytes]
gi|332819702|ref|XP_003310418.1| PREDICTED: RE1-silencing transcription factor isoform 1 [Pan
troglodytes]
Length = 1097
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 363 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 276 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
>gi|260786771|ref|XP_002588430.1| hypothetical protein BRAFLDRAFT_116992 [Branchiostoma floridae]
gi|229273592|gb|EEN44441.1| hypothetical protein BRAFLDRAFT_116992 [Branchiostoma floridae]
Length = 1108
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P CKHC +F+++ L H + P + FIC C Y T + +H LIH
Sbjct: 615 PYKCKHC-DFSTTQKAHLKAH-------LAKHPGEKAFICEVCGYRTGLKDQFSSHMLIH 666
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K KC C + A +K L+ H H +
Sbjct: 667 TGEKPHKCDQCEFSARKKSTLRLHRVKYHGAR 698
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC NF++ + L +H +VR K F+C C + T + H IH
Sbjct: 392 PFKCDHC-NFSARYRSTLRQH------LVRHTGEK-PFMCKDCGFRTANKYQLTRHIRIH 443
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K +KC C Y A +K L H + KH+T+
Sbjct: 444 TGEKPYKCDQCDYSAAEKSTLTKH-QTKHNTE 474
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+CV C Y T ++ NH H G+K +KC C Y A QK L H++
Sbjct: 1030 LVCVECGYRTSNKTSLANHLKTHSGEKPYKCDQCDYSAAQKGTLTRHLQ 1078
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC +F++ + L +H ++R K F+C C + T + H H
Sbjct: 47 PFKCNHC-DFSAKYRSTLRQH------LLRHTGEK-PFMCKDCGFRTAQKSRLSEHMRTH 98
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K +KC C Y A K L H + KH+TK
Sbjct: 99 TGEKPYKCDQCDYSAALKSTLAKH-RTKHNTK 129
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
F++ + L EH + P F C CD+ +R H L H G+K F C
Sbjct: 26 EFSTYSSSELSEHE-------KTHPKDKPFKCNHCDFSAKYRSTLRQHLLRHTGEKPFMC 78
Query: 118 CLCSYGAYQKEKLQFHVK 135
C + QK +L H++
Sbjct: 79 KDCGFRTAQKSRLSEHMR 96
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+++C CD+ T N+ H +H G K +KC C + A QK + H
Sbjct: 811 RYMCDQCDFRTAKRYNLLRHVTMHTGKKIYKCSKCDFSAEQKSSVDEH 858
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C + T I ++ H L+H G K +KC C + QK L+ H+
Sbjct: 588 YRCGECGFRTAIKSSLTQHLLLHTGQKPYKCKHCDFSTTQKAHLKAHL 635
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F+C C Y T +R+H H +K FKC C + A +K L H+ KH+T+
Sbjct: 477 FLCNECAYRTTHKAYLRDHMKSHSAEKPFKCDQCDFAAVRKSNLTRHLA-KHATE 530
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C + T ++ H +H G + +KC C Y A +K ++ H+ H+++
Sbjct: 188 YVCGECGFSTARKDSLIKHLPVHAGPRPYKCDQCEYAATRKRHVKIHLARYHTSE 242
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K F+C C + T ++ H H +++FKC C Y A ++ L H++ KH+T+
Sbjct: 128 TKKPFLCDECGFRTTHKAFLKGHMRSHTAERRFKCDQCDYAAVKQSNLTRHLE-KHATE 185
>gi|606948|gb|AAC50115.1| neuron-restrictive silencer factor, partial [Homo sapiens]
gi|1094872|prf||2106430A neuron-restrictive silencer factor
Length = 681
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 445 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 496
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 358 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 406
>gi|156120409|ref|NP_001095350.1| RE1-silencing transcription factor [Bos taurus]
gi|154425545|gb|AAI51612.1| MGC157163 protein [Bos taurus]
gi|296486548|tpg|DAA28661.1| TPA: hypothetical protein LOC507148 [Bos taurus]
Length = 999
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|426231736|ref|XP_004009894.1| PREDICTED: RE1-silencing transcription factor-like [Ovis aries]
Length = 997
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|261289267|ref|XP_002603076.1| hypothetical protein BRAFLDRAFT_135810 [Branchiostoma floridae]
gi|229288393|gb|EEN59088.1| hypothetical protein BRAFLDRAFT_135810 [Branchiostoma floridae]
Length = 644
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 37 QTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFT 96
Q +M P C C ++++ L EH +R + F+CV C Y T
Sbjct: 199 QLSQHMRTHTGKKPYKCDQC-DYSAVQKGHLDEH------FLRKHTNEKPFVCVECGYRT 251
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+S ++ H H G+K +KC C Y A QK L HV KH+
Sbjct: 252 ALSSSLSLHKRTHTGEKPYKCSQCDYSATQKCNLDQHVLAKHT 294
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T + + H H G+K +KC C Y A QK L HV KH+++
Sbjct: 128 YMCGECGYRTAVKCQLSRHMRTHTGEKPYKCDQCDYSAIQKGHLDNHVVRKHTSE 182
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T N+ H H G+K +KC C Y A QK L HV KH+
Sbjct: 357 YMCWECGYRTTHPSNLSKHMRTHTGEKPYKCDQCDYSAAQKCHLDLHVITKHT 409
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
CQ +M P C C ++++ L H +VR + ++C C +
Sbjct: 141 CQLSRHMRTHTGEKPYKCDQC-DYSAIQKGHLDNH------VVRKHTSEKPYMCGECGFR 193
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
T + + H H G K +KC C Y A QK L H KH+
Sbjct: 194 TAVRYQLSQHMRTHTGKKPYKCDQCDYSAVQKGHLDEHFLRKHT 237
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +F++++ L +H M++ K ++CV C Y T S HT H
Sbjct: 498 PHKCDQC-DFSAAESGGLKQH-----IMLKHAGEK-PYMCVLCGYRTGHSSLFSRHTRKH 550
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y A +K+ L H+ KH+
Sbjct: 551 SGEKPYKCDQCEYVAARKKYLDQHIVIKHT 580
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 50 PQSCKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
P C C+ + D +++++H++ P +ICV CDY T ++ H
Sbjct: 555 PYKCDQCEYVAARKKYLDQHIVIKHTDEKP-----------YICVECDYRTATKYSLSVH 603
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H +Q+KC C + A +++ L HV H+
Sbjct: 604 MMKHTDKRQYKCDKCDFSAAKRDNLDTHVMAIHT 637
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D++++ +H+ P ++C C Y T + ++ H H G+K +KC C Y
Sbjct: 401 DLHVITKHTGEKP-----------YMCGECGYKTADTTSLTIHKRTHTGEKPYKCDQCGY 449
Query: 123 GAYQKEKLQFHVKNKHS 139
A QK + HV KH+
Sbjct: 450 TAAQKGSVDRHVMMKHT 466
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y + + H H G+K +KC C Y +K+KL HV K++ +
Sbjct: 71 YMCGECGYRVALKYQLSQHMKTHAGEKPYKCDQCDYAGARKDKLDKHVMVKYTAE 125
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 61 SSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC 120
S D +++M+H+ P + C C Y T ++ + H H G+K KC C
Sbjct: 456 SVDRHVMMKHTGEKP-----------YACGECGYRTAVNSPLTRHKRTHTGEKPHKCDQC 504
Query: 121 SYGAYQKEKLQFHVKNKHS 139
+ A + L+ H+ KH+
Sbjct: 505 DFSAAESGGLKQHIMLKHA 523
>gi|194667898|ref|XP_872784.3| PREDICTED: RE1-silencing transcription factor [Bos taurus]
Length = 1004
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|417405413|gb|JAA49418.1| Putative re1-silencing transcription factor [Desmodus rotundus]
Length = 957
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|440903361|gb|ELR54032.1| hypothetical protein M91_21394 [Bos grunniens mutus]
Length = 1058
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|440903360|gb|ELR54031.1| RE1-silencing transcription factor [Bos grunniens mutus]
Length = 1006
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|260808221|ref|XP_002598906.1| hypothetical protein BRAFLDRAFT_107334 [Branchiostoma floridae]
gi|229284181|gb|EEN54918.1| hypothetical protein BRAFLDRAFT_107334 [Branchiostoma floridae]
Length = 461
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++++ + L +H M + K ++C C Y T +
Sbjct: 158 HMRTHTGEKPYKCDQC-DYSAAEKSTLDDH------MTKHTGQK-PYMCGECGYRTALRA 209
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
N+ H H G K FKC C+Y A +K L FHVK K+
Sbjct: 210 NLSRHMKTHTGGKLFKCDQCNYSAARKSDLSFHVKRHTGEKL 251
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 53 CKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
C HC T+ +L L +HS P ++C C Y N+ H H
Sbjct: 310 CDHCDYSTTQKSSLDIHLAKHSGEKP-----------YMCGECGYRAACKSNLSRHMRTH 358
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C Y A +K L H+
Sbjct: 359 TGEKPYKCDQCDYSAAEKSSLDQHL 383
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H G+K +KC C Y A +K L H+
Sbjct: 140 YMCGECGYRTTQKHNLLRHMRTHTGEKPYKCDQCDYSAAEKSTLDDHM 187
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A +K L H+
Sbjct: 392 YMCGECGYRTTYKSDLSKHMRTHTGEKPYKCDQCDYSAAEKSTLDDHM 439
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 15/92 (16%)
Query: 53 CKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
C HC T+ +L L +HS P ++C C Y N+ H H
Sbjct: 254 CDHCDYSTTQKSSLDIHLAKHSGEKP-----------YMCDKCGYRAACKSNLSRHMRTH 302
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K + C C Y QK L H+ KHS +
Sbjct: 303 TGEKLYMCDHCDYSTTQKSSLDIHLA-KHSGE 333
>gi|297475892|ref|XP_002688313.1| PREDICTED: RE1-silencing transcription factor [Bos taurus]
gi|296486531|tpg|DAA28644.1| TPA: hypothetical LOC615792 [Bos taurus]
Length = 1004
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|260781147|ref|XP_002585684.1| hypothetical protein BRAFLDRAFT_111537 [Branchiostoma floridae]
gi|229270714|gb|EEN41695.1| hypothetical protein BRAFLDRAFT_111537 [Branchiostoma floridae]
Length = 613
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F+C C + T + N+ H H G+K +KC C Y A QK +L +HV N
Sbjct: 495 FMCAECGFRTALKANLSRHMRTHTGEKPYKCDQCDYSAAQKGELDYHVAN 544
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
++C C Y T N H IH G++ +KC C Y A QK+ L+ H KH+
Sbjct: 36 YMCRECGYRTAKKFNFSQHIRIHTGERPYKCDQCEYSATQKQNLKQHRLYKHTA 89
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY + + H H G K + C C Y A +K +L H++
Sbjct: 236 FKCDQCDYSALTKSKLHQHQSKHTGRKPYNCGECGYKAARKSELSRHMRT 285
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+++C C Y T ++ H H G+K +C C Y A +K L+ H+
Sbjct: 151 RYMCEKCGYRTTHKTHLSRHFRTHTGEKPHRCDQCDYSASEKRSLEIHL 199
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C CD+ T + H H G+K +KC C Y A QK L H K
Sbjct: 551 YMCGECDFRTSRRPCLTRHMRTHTGEKPYKCDQCDYSAAQKGTLDKHRKQ 600
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 15/95 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C S +L L +H+ + P ++C C Y T + H
Sbjct: 179 PHRCDQCDYSASEKRSLEIHLAKHNGDKP-----------YMCEKCGYRTAEKSYLFLHL 227
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
H G+K FKC C Y A K KL H ++KH+ +
Sbjct: 228 KTHTGEKPFKCDQCDYSALTKSKLHQH-QSKHTGR 261
>gi|349603996|gb|AEP99667.1| RE1-silencing transcription factor-like protein, partial [Equus
caballus]
Length = 552
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 362 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 275 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
>gi|260782978|ref|XP_002586556.1| hypothetical protein BRAFLDRAFT_62293 [Branchiostoma floridae]
gi|229271673|gb|EEN42567.1| hypothetical protein BRAFLDRAFT_62293 [Branchiostoma floridae]
Length = 296
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C Y T +++ HT IH GDK +KC +C +G+ Q L+ H++ KH+
Sbjct: 41 YKCELCAYATSRMSDLKRHTAIHTGDKPYKCDICGFGSAQMSNLKQHIRTKHT 93
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C Y T +++ H +IH +K +KC +C +GA +K L+ H+ KH+
Sbjct: 155 YKCEVCAYATSRMSDLKRHIVIHSVEKPYKCDICGHGASRKSNLKQHIIAKHT 207
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 77 MVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+++ K + C C Y T +++ H +H G+K +KC LC+Y + L+ H
Sbjct: 3 ILKRQSGKRSYTCDVCHYATSRMSHLKQHIAVHTGEKSYKCELCAYATSRMSDLKRHT 60
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T +++ H +H GDK +KC +C+Y + L+ H+
Sbjct: 127 YKCDICGYATSRMSHLKQHISVHTGDKSYKCEVCAYATSRMSDLKRHI 174
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 15/94 (15%)
Query: 50 PQSCKHCKNFTSSDVNL----LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
P C C + S NL + +H+ P + C C Y T + H
Sbjct: 182 PYKCDICGHGASRKSNLKQHIIAKHTGEKP-----------YKCDVCGYGTAQLSTLNQH 230
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
IH G K +KC +C +G + L+ H+ KH+
Sbjct: 231 MTIHTGHKPYKCDICGHGTARMSNLKQHIIAKHT 264
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C + + N++ H H DK +KC +C YGA Q L+ H+ +KH+
Sbjct: 69 YKCDICGFGSAQMSNLKQHIRTKHTRDKPYKCEICGYGATQLSTLKRHILDKHT 122
>gi|118142849|gb|AAH17822.1| REST protein [Homo sapiens]
Length = 460
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 363 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 276 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 330
>gi|260825476|ref|XP_002607692.1| hypothetical protein BRAFLDRAFT_123267 [Branchiostoma floridae]
gi|229293041|gb|EEN63702.1| hypothetical protein BRAFLDRAFT_123267 [Branchiostoma floridae]
Length = 871
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
F+C C Y T + H IH G+K F C C Y A QK L HV++KH+T
Sbjct: 816 FMCGTCGYRTTRKALLAKHMRIHTGEKPFACEQCDYRANQKAHLDRHVRSKHTT 869
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + MR H IH G++ F C C Y +K L H++
Sbjct: 788 YTCDLCDYTSAYKVTMRYHKQIHTGERPFMCGTCGYRTTRKALLAKHMR 836
>gi|27370669|gb|AAH38985.1| Similar to RE1-silencing transcription factor, partial [Homo
sapiens]
Length = 454
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 363 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+YF+ N H H G++ +KC LC Y + QK L H++ K
Sbjct: 276 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEK 330
>gi|260815012|ref|XP_002602207.1| hypothetical protein BRAFLDRAFT_216678 [Branchiostoma floridae]
gi|229287514|gb|EEN58219.1| hypothetical protein BRAFLDRAFT_216678 [Branchiostoma floridae]
Length = 350
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M V P C +C+ ++S++ L +H M R K ++C C Y T
Sbjct: 78 HMRRHTGVKPYKCDYCE-YSSAENRDLNKH------MARHTGEK-PYMCGECGYRTADRS 129
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H G+K +KC LC Y A +K L HV KH+
Sbjct: 130 SLAVHLRTHTGEKPYKCGLCDYSAAKKGNLDRHVTRKHT 168
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y T ++ H H G+K ++C LC Y A +K+ L HV
Sbjct: 229 YICGECGYRTAYRSSLVVHLRTHTGEKPYRCALCDYSAAKKDNLDRHV 276
>gi|432111609|gb|ELK34711.1| RE1-silencing transcription factor [Myotis davidii]
Length = 1086
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H +H+ +QF C +C Y A +K LQ+H K+KH T
Sbjct: 502 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 553
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+YF+ N H H G++ +KC LC Y + QK L H++
Sbjct: 415 YTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 463
>gi|260811193|ref|XP_002600307.1| hypothetical protein BRAFLDRAFT_66809 [Branchiostoma floridae]
gi|229285593|gb|EEN56319.1| hypothetical protein BRAFLDRAFT_66809 [Branchiostoma floridae]
Length = 1342
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+K +FIC+ CDY T ++ HT H G+K +KC C Y A +K+ H+
Sbjct: 272 LKNRFICIECDYRTASKSDLVRHTKAHTGEKPYKCDQCDYSAARKDYFDRHI 323
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 71 SENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
+E V+ F DY T ++ H +IH GDK +KC C Y A +K+ L
Sbjct: 78 TEQMAGSAEKGSVEKNFTFTELDYRTASKSDLFRHAIIHTGDKPYKCDQCDYSATRKDYL 137
Query: 131 QFHV 134
+ H+
Sbjct: 138 KSHL 141
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C++ T++ NL M +R + + C CDY + +++ H H
Sbjct: 890 PHKCDQCEHRTATKANLAMH--------MRKHTGEKPYKCDQCDYSSARKGDLKKHMFRH 941
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K + C C Y K L H+ S K
Sbjct: 942 HGEKHYDCDQCDYSTAWKASLVVHMSQHTSEK 973
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++ N L H M + K +F+C C + T + N+ H H
Sbjct: 429 PHKCDQC-DYSATRKNYLDRH------MTKHTGEK-RFVCGECGFRTADNYNLNVHMRKH 480
Query: 110 LGDKQFKC--CLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y A QK L H+ KH+
Sbjct: 481 TGEKPYKCDQLQCDYSAAQKVTLDQHIAVKHT 512
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F C CDY ++ H H G+K KC C Y A +K L H+
Sbjct: 401 RFACEKCDYMAAKKSDLFRHNRTHTGEKPHKCDQCDYSATRKNYLDRHM 449
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F+C C Y T+ + H H G+K +KC C Y A +K + H+
Sbjct: 1013 RFMCEVCGYRTVKKSDFTVHQRKHTGEKPYKCGQCDYSAARKSHVDQHM 1061
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C+Y ++ H IH G+K +KC +C Y + +K L+ H+
Sbjct: 332 YTCGDCEYKAACKSDLTTHMKIHTGEKPYKCDICDYSSVRKYDLERHL 379
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C NF+++ + H + + ++C C Y
Sbjct: 168 HMRIHTGEKPYKCDQC-NFSAARKDSFDNH-------IAKHAGEKPYMCGECGYRAAHMS 219
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
++ H IH +K +KC +C Y + +K L+ H+ +KHS + +
Sbjct: 220 DLTKHMRIHTDEKPYKCDMCDYSSVRKRDLKRHM-SKHSRETE 261
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CD+ + +++ H L+H G+K +KC C Y K L H++
Sbjct: 835 YECDQCDFSSSWKESLARHMLVHAGNKSYKCGECEYKTAVKNNLTKHLR 883
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 9/95 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+MS P C C+ T++ +L+ +R K C CDY +
Sbjct: 1253 HMSHHTGKKPYKCGECEYRTAAKHDLVRH--------MRKHTGKRPHKCDQCDYSSACKN 1304
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+R H H G+ F C C Y A + L H+K
Sbjct: 1305 NLRKHMFKH-GETPFLCGECGYMAGDRSDLSKHMK 1338
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+Y T + N+ H H G+K KC C + K L H++
Sbjct: 863 YKCGECEYKTAVKNNLTKHLRTHTGEKPHKCDQCEHRTATKANLAMHMR 911
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C C++ T N+ H H G+K +KC C Y + +K L+ H+ H K D
Sbjct: 893 CDQCEHRTATKANLAMHMRKHTGEKPYKCDQCDYSSARKGDLKKHMFRHHGEKHYD 948
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H H G+K + C C YG K L H++
Sbjct: 1042 YKCGQCDYSAARKSHVDQHMTTHTGEKPYLCEECGYGTVSKSHLTVHLR 1090
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C++ T + H H G+K KC C Y + +K L+ H+
Sbjct: 751 FMCGECEFSTAAKHELVRHVRKHTGEKPHKCDQCDYASARKYSLRKHM 798
>gi|260815773|ref|XP_002602647.1| hypothetical protein BRAFLDRAFT_81927 [Branchiostoma floridae]
gi|229287958|gb|EEN58659.1| hypothetical protein BRAFLDRAFT_81927 [Branchiostoma floridae]
Length = 316
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
N ++ D +L +H+ P ++C C Y T N+ H H G+K FKC
Sbjct: 174 NRSTLDYHLKAKHNGEKP-----------YMCGECGYRTAHRPNLSKHIRTHTGEKPFKC 222
Query: 118 CLCSYGAYQKEKLQFHVKNKHST 140
C Y A K L+ H+K KH+T
Sbjct: 223 DQCDYSAVSKSNLENHLKTKHTT 245
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
IC C Y T I ++ H H G+K + C C Y A +K L H + KHS
Sbjct: 250 ICGECGYRTAIKSHLTQHMRTHTGEKPYTCDQCDYSAARKSSLNRHHQAKHS 301
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 87 FICVACDYFTI----ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C Y ISQ+MR HT G+K +KC LC Y A + L +H+K KH+
Sbjct: 135 YKCGECGYKATRQFTISQHMRTHT----GEKPYKCELCDYSAVNRSTLDYHLKAKHN 187
>gi|260811303|ref|XP_002600362.1| hypothetical protein BRAFLDRAFT_204275 [Branchiostoma floridae]
gi|229285648|gb|EEN56374.1| hypothetical protein BRAFLDRAFT_204275 [Branchiostoma floridae]
Length = 579
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 87 FICVACDYF---TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C CDY TI + M H H G+K FKC C Y A QK +LQ H++ KH+
Sbjct: 124 FKCHVCDYSAYETISTTAMTKHIRTHTGEKPFKCQQCDYSASQKPQLQRHIRGKHT 179
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 87 FICVACDYFTIIS---QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C CDY + + M H H G+K FKC C Y A QK +LQ H+++KH+
Sbjct: 240 FKCEVCDYASASKSSLKTMTKHIRTHTGEKPFKCQQCDYSASQKAQLQRHIRSKHT 295
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C ++++S L H RP + C CD+ + H H
Sbjct: 154 PFKCQQC-DYSASQKPQLQRHIRGKHTGERP------YHCGHCDFSAARKDGLYQHMTTH 206
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K + C LCSY A QK KL+ H+
Sbjct: 207 TGEKPYSCELCSYSARQKGKLKLHM 231
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C CDY + + ++ H H G+K +KC +C + +QK+ L+ HV
Sbjct: 70 CTLCDYSAVEKRGLKFHMATHTGEKPYKCEVCPFATHQKQTLKQHV 115
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C ++++S L H + RP + C CD+ + H H
Sbjct: 270 PFKCQQC-DYSASQKAQLQRHIRSKHTGERP------YHCGHCDFSAARKDGLYQHMTTH 322
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K + C LCS+ A QK L+ H+
Sbjct: 323 TGEKPYSCELCSFSARQKGHLKLHM 347
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CDY +++ H + H GDK +C LC + ++ L+ H+
Sbjct: 412 FHCEYCDYSAARKVDLKRHMVKHTGDKPHRCELCDFSTARRGHLKRHM 459
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY TI ++ H +H +K F C C Y A +K L+ H+
Sbjct: 384 YKCEVCDYSTISMPYLKKHMAVHALEKPFHCEYCDYSAARKVDLKRHM 431
>gi|363733414|ref|XP_420580.3| PREDICTED: RE1-silencing transcription factor [Gallus gallus]
Length = 893
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
C CDY T N + H +H+ +QF C +C Y A +K LQ+H+K++H
Sbjct: 362 LTCPHCDYKTADRSNFKKHVELHVNPRQFLCPVCDYAASKKCNLQYHIKSRH 413
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C YF+ N H H G++ ++C +C Y + QK L H++
Sbjct: 277 YTCSQCSYFSDRKNNYIQHIRTHTGERPYQCAMCPYSSSQKTHLTRHMR 325
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C C Y + ++ H H G+K FKC CSY A + ++ H + H
Sbjct: 305 YQCAMCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEVTRHARQVH 356
>gi|427782147|gb|JAA56525.1| Putative gonadotropin inducible transcription factor [Rhipicephalus
pulchellus]
Length = 974
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 14 TKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL---LMEH 70
+++TC C + SD H Q + V P C C + ++ L L +H
Sbjct: 679 SQQTCELCQRTF-SDSKCLRKHHQ-----AVHGKVKPYVCSFCGHMSARKAMLQLHLRQH 732
Query: 71 SENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
+ P F C C+Y T ++R H + H G K +KC C Y Q
Sbjct: 733 TGEKP-----------FACNLCEYRTGDHNSLRRHKMRHSGTKPYKCPHCPYACIQAISY 781
Query: 131 QFHVKNKH 138
+ H+KNKH
Sbjct: 782 KMHMKNKH 789
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 51 QSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
Q+C+ C+ T SD L +H + V+P ++C C + + ++ H H
Sbjct: 681 QTCELCQR-TFSDSKCLRKHHQAVHGKVKP------YVCSFCGHMSARKAMLQLHLRQHT 733
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K F C LC Y L+ H K +HS
Sbjct: 734 GEKPFACNLCEYRTGDHNSLRRH-KMRHS 761
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
CV C+Y T + + NH IH ++ F C C G Q +L+ H
Sbjct: 618 CVQCEYRTFSAFKLENHARIHSEERDFTCAQCGKGFKQLSQLRNH 662
>gi|260827937|ref|XP_002608920.1| hypothetical protein BRAFLDRAFT_85515 [Branchiostoma floridae]
gi|229294274|gb|EEN64930.1| hypothetical protein BRAFLDRAFT_85515 [Branchiostoma floridae]
Length = 1343
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 91 ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+C + TI NM H LIH GDK +KC LCSY + QK L H+K + +
Sbjct: 1210 SCKFETIYKANMPAHLLIHSGDKPYKCDLCSYQSVQKSNLNTHMKKHYGGR 1260
>gi|357620020|gb|EHJ72358.1| hypothetical protein KGM_17528 [Danaus plexippus]
Length = 766
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
K ++ C CDY TI+ N+ H H +K+FKC +C + L+FHVK KH
Sbjct: 705 KKRYSCDQCDYATILPANLVQHRYKHSSEKRFKCEVCPFATKYNTSLRFHVKKKH 759
>gi|260783431|ref|XP_002586778.1| hypothetical protein BRAFLDRAFT_102936 [Branchiostoma floridae]
gi|229271904|gb|EEN42789.1| hypothetical protein BRAFLDRAFT_102936 [Branchiostoma floridae]
Length = 830
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++++ + L +H M + K ++C C Y T +
Sbjct: 194 HMRTHTGEKPYKCDQC-DYSAAEKSTLDDH------MTKHTGQK-PYMCGECGYRTALRA 245
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
N+ H H G K +KC C+Y A +K L FHVK K+
Sbjct: 246 NLSRHMKTHTGGKLYKCDQCNYSAARKSDLSFHVKRHRGEKL 287
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++++ + L +H M + K ++C C Y T +
Sbjct: 628 HMRTHTGEKPYKCDQC-DYSAAEKSTLDDH------MTKHTGQK-PYMCGECGYRTALRA 679
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
N+ H H G K +KC C+Y A +K L FHVK K+
Sbjct: 680 NLSRHMKTHTGGKLYKCDQCNYSAARKSDLSFHVKRHRGEKL 721
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T ++ H H G K +KC C Y A QK L H+ KHS
Sbjct: 372 YMCGECGYRTAYKSDLSKHMRTHTGAKPYKCDQCDYSAAQKSSLDQHL-AKHS 423
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 50/139 (35%), Gaps = 27/139 (19%)
Query: 5 EQCLLVPLSTKKT------CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKN 58
E+C LV TK T C C D+ +M P C C
Sbjct: 355 EKCALVRHVTKHTGEKPYMCGECGYRTAYKSDLS-------KHMRTHTGAKPYKCDQCDY 407
Query: 59 FTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQF 115
+ +L L +HS + P ++C C Y T ++ H H G+K +
Sbjct: 408 SAAQKSSLDQHLAKHSGDKP-----------YMCGECGYRTTYKSDLSKHMRTHTGEKPY 456
Query: 116 KCCLCSYGAYQKEKLQFHV 134
KC C Y A QK + H+
Sbjct: 457 KCDHCDYSAAQKFNVDQHL 475
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 24 YVPSDIDVFIGHCQTCPNMSFLNSVI--PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPD 81
Y + D H +T ++ + P C C ++++++ + L+ H V
Sbjct: 119 YRTTRKDSLSQHMRTHTDIHMRTHTVEKPYKCDQC-DYSAAEKSNLVRH-------VTKH 170
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ ++C C Y T + H H G+K +KC C Y A +K L H+
Sbjct: 171 TSEKPYMCGECGYRTTQKHTLLRHMRTHTGEKPYKCDQCDYSAAEKSTLDDHM 223
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 22/47 (46%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y + H H G+K FKC C Y A QK LQ HV
Sbjct: 1 MCGECGYRAAHKSGLSRHLRTHTGEKPFKCDQCDYSAAQKCDLQKHV 47
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 14/86 (16%)
Query: 53 CKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
C HC T+ +L L +H+ P ++C C Y T ++ H H
Sbjct: 724 CDHCDYSTTQKSSLDIHLSKHTGEKP-----------YMCGECGYRTARKSDLSIHMRTH 772
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
GDK +KC C Y + +K L HV+
Sbjct: 773 TGDKPYKCDQCDYVSSRKSNLDQHVR 798
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 53 CKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
C HC T+ +L L +HS P ++C C Y N+ H H
Sbjct: 290 CDHCDYSTTQKSSLDIHLAKHSGEKP-----------YMCDKCGYRAACKSNLSRHMRTH 338
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C Y A +K L HV
Sbjct: 339 TGEKPYKCDQCDYSAAEKCALVRHV 363
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++++++ + L+ H V + ++C C Y T + H H
Sbjct: 581 PYKCDQC-DYSAAEKSNLVRH-------VTKHTSEKPYMCGECGYRTTQKHTLLRHMRTH 632
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C Y A +K L H+
Sbjct: 633 TGEKPYKCDQCDYSAAEKSTLDDHM 657
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + N+ H H G+K +KC C Y K L H++
Sbjct: 778 YKCDQCDYVSSRKSNLDQHVRKHTGEKPYKCGECGYRTAHKSHLSKHMRT 827
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY +++ H H GDK + C C Y A +K L H++
Sbjct: 28 FKCDQCDYSAAQKCDLQKHVTKHTGDKPYMCGECGYRAARKSHLSQHMRT 77
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H +K +KC C Y A QK L HV
Sbjct: 56 YMCGECGYRAARKSHLSQHMRTHTDEKPYKCDQCDYSAAQKSTLDKHV 103
>gi|326918773|ref|XP_003205662.1| PREDICTED: RE1-silencing transcription factor-like [Meleagris
gallopavo]
Length = 893
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
C CDY T N + H +H+ +QF C +C Y A +K LQ+H+K++H
Sbjct: 362 LTCPHCDYKTADRSNFKKHVELHVNPRQFLCPVCDYAASKKCNLQYHIKSRH 413
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C YF+ N H H G++ ++C +C Y + QK L H++
Sbjct: 277 YTCSQCSYFSDRKNNYIQHIRTHTGERPYQCAMCPYSSSQKTHLTRHMR 325
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C C Y + ++ H H G+K FKC CSY A + ++ H + H
Sbjct: 305 YQCAMCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEVTRHARQVH 356
>gi|449270674|gb|EMC81331.1| RE1-silencing transcription factor [Columba livia]
Length = 892
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
C CDY T N + H +H+ +QF C +C Y A +K LQ+H+K++H
Sbjct: 362 LTCPHCDYKTADRSNFKKHVELHINPRQFLCPVCDYAASKKCNLQYHIKSRH 413
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C YF+ N H H G++ ++C +C Y + QK L H++
Sbjct: 277 YTCSQCSYFSDRKNNYIQHIRTHTGERPYQCAMCPYSSSQKTHLTRHMR 325
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C C Y + ++ H H G+K FKC CSY A + ++ H + H
Sbjct: 305 YQCAMCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEVTRHARQVH 356
>gi|358338524|dbj|GAA36228.2| zinc finger and SCAN domain-containing protein 2 [Clonorchis
sinensis]
Length = 691
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 36 CQTCPNMSFLNS------------VIPQSCKHCKNF--TSSDVNLLMEHSENCPCMVRPD 81
C +CP M + N+ V +C+ C+ F T S + L S P + +
Sbjct: 144 CPSCPAM-YANANAFTKHMREKHFVKVYTCRQCEEFFETLSQLFLHARRSHVDPKKPKRN 202
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
P +KF C C+Y T M +H H G+K + C +C+ QK ++ H +N+H
Sbjct: 203 PANFKFHCDQCNYMTNNGGTMEHHKRAHTGEKPYVCDVCNKRFAQKANMKTH-RNRH 258
>gi|260831890|ref|XP_002610891.1| hypothetical protein BRAFLDRAFT_126280 [Branchiostoma floridae]
gi|229296260|gb|EEN66901.1| hypothetical protein BRAFLDRAFT_126280 [Branchiostoma floridae]
Length = 853
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 38 TCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
T PN S P +C C + + EH + +R F+C CD+ T
Sbjct: 728 TTPNKS------PYACTQC--------DYITEHRIHLTAHMRKHTGAKPFVCRLCDFRTA 773
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+MR H H G K FKC LC Y A + + H+ +HS +
Sbjct: 774 YRDSMRQHVQTHTGAKPFKCKLCDYRAARSTWITSHMIGQHSNE 817
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIH-LGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
F C CDY ++ +++ H +H G+K KC LC Y A K L H+++ H+T
Sbjct: 675 FKCKQCDYSAVVKRDLHKHIQVHHTGEKPHKCTLCGYRAAHKRGLAAHMRSNHTT 729
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C + T S N NH +H GDK FKC C Y A K L H++ H+
Sbjct: 647 FMCEYCGFRTFHSWNFTNHQKLHSGDKPFKCKQCDYSAVVKRDLHKHIQVHHT 699
>gi|260810939|ref|XP_002600180.1| hypothetical protein BRAFLDRAFT_66688 [Branchiostoma floridae]
gi|229285466|gb|EEN56192.1| hypothetical protein BRAFLDRAFT_66688 [Branchiostoma floridae]
Length = 3220
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYG 123
V L E++E C V F C+ CD+ Q++ H H G+K +KC C Y
Sbjct: 1538 VQDLTENTEKCR-------VNKSFACMECDFKASSRQDLSRHIRKHTGEKPYKCDHCDYA 1590
Query: 124 AYQKEKLQFHVKNKHS 139
A QK L H+ KHS
Sbjct: 1591 AAQKTTLDRHIVAKHS 1606
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 41 NMSFLNSVIPQSCKH--CKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYF 95
+M + P C H C TSS NL +++H+ N P ++C C Y
Sbjct: 860 HMRIHSGEKPYKCDHSECDYVTSSKFNLDRHVLKHTGNRP-----------YMCGECGYR 908
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC LC Y A +K L+ H+
Sbjct: 909 AAQKISLSRHMRTHTGEKPYKCHLCEYSAAEKVSLKNHL 947
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 41 NMSFLNSVIPQSCKH--CKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYF 95
+M + P C H C TSS NL +++H+ N P ++C C Y
Sbjct: 1855 HMRIHSGEKPYKCDHSECDYVTSSKFNLDRHVLKHTGNRP-----------YMCGECGYR 1903
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC LC Y A +K L+ H+
Sbjct: 1904 AAQKISLSRHMRTHTGEKPYKCHLCEYSAAEKVSLKNHL 1942
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
V +F C+ CD+ Q + H H G+K +KC C Y A QK L H+ +KH+
Sbjct: 1068 VDRRFACMECDFRASSKQGLSRHVRKHTGEKPYKCNQCEYAAAQKCSLDRHM-DKHT 1123
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY + ++ NH H G+K FKC C Y A QK+ L H+
Sbjct: 1156 YKCDHCDYSAALKTSLVNHMRKHTGEKPFKCDQCEYSATQKKNLDRHM 1203
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y TI+ ++ H H G+K +KC C Y A +K L H+
Sbjct: 2437 YMCGECGYRTIVRSSLATHMRTHTGEKPYKCDQCEYSASRKNHLDRHM 2484
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M + P C C TS +L +++H+ + P ++C C Y
Sbjct: 1317 HMQIHSGEKPYKCDQCDYSTSWKTHLKRHMLKHTGDRP-----------YMCGECGYRAA 1365
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K FKC LC Y A +K L+ H+
Sbjct: 1366 QKVSLSRHMRTHTGEKPFKCHLCEYSAAEKGSLKNHL 1402
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C+Y T Q++ +H IH G+K +KC C Y K L+ H++ KHS
Sbjct: 291 YTCSQCEYRTARKQDLTSHMRIHSGEKPYKCDQCDYSTSWKTHLKRHMR-KHS 342
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C+ CD+ Q++ H H G+K +KC C Y A K L H+ KHS
Sbjct: 561 CMECDFRASSKQDLSRHIRKHTGEKPYKCGHCDYAAALKTTLDRHIVAKHS 611
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P +C C+ F ++ + L H +R + + C CDY T +R H L H
Sbjct: 2579 PHACSECE-FRTAHKSYLTTH-------MRIHSGEKPYKCDQCDYCTPWKTLLRRHMLKH 2630
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
GD+ + C C Y A QK L H++
Sbjct: 2631 TGDRAYMCGECGYRAAQKVSLSRHMR 2656
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY T +++ H L H GD+ + C C Y A QK L H++
Sbjct: 1327 YKCDQCDYSTSWKTHLKRHMLKHTGDRPYMCGECGYRAAQKVSLSRHMR 1375
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M + P C C TS +L + +HS + P ++C C Y
Sbjct: 309 HMRIHSGEKPYKCDQCDYSTSWKTHLKRHMRKHSGDRP-----------YMCGECGYRAA 357
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC LC Y A +K L+ H+
Sbjct: 358 QKVSLSRHMRTHTGEKPYKCHLCEYSAAEKGNLKNHL 394
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C ++ NL + EH+ P ++C C Y T
Sbjct: 2959 HMRTHTGEKPFKCDQCDYSSAKKNNLDRHMFEHAGEKP-----------YMCGECGYSTA 3007
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++ +H H G+K FKC C Y A +K L H++
Sbjct: 3008 NRTHLLDHAKTHTGEKPFKCEQCDYSASRKNNLDRHMR 3045
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C+ +++S N L H M + K ++C C Y T+
Sbjct: 2455 HMRTHTGEKPYKCDQCE-YSASRKNHLDRH------MAKHTGEK-PYMCGECGYRTVERS 2506
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC C Y A +K L H+
Sbjct: 2507 HLSRHMRTHTGEKPYKCDQCEYSASRKNHLDRHL 2540
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H + H G+K +KC C Y A QK L H+
Sbjct: 2325 YMCGECGYRTADRSHLSRHIVKHTGEKPYKCDQCDYSAAQKGTLDQHM 2372
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 46 NSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
S P +C C+ T+ +L +R + + C CDY T +++ H
Sbjct: 286 QSEKPYTCSQCEYRTARKQDLTSH--------MRIHSGEKPYKCDQCDYSTSWKTHLKRH 337
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H GD+ + C C Y A QK L H++
Sbjct: 338 MRKHSGDRPYMCGECGYRAAQKVSLSRHMR 367
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY ++ H H G+K +KC C Y A QK+ L H+
Sbjct: 730 YKCDQCDYSAAQKNSLDRHMAKHTGEKPYKCDQCKYSAAQKKTLDRHM 777
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY ++ H H G+K +KC C Y A QK+ L H+
Sbjct: 1725 YKCDQCDYSAAQKNSLDRHMAKHTGEKPYKCDQCKYSAAQKKTLDRHM 1772
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYK-FICVACDYFTIISQNMRNHTLI 108
P C C+ ++++ N L H MV+ K K F C C Y T + H
Sbjct: 643 PYKCDQCE-YSAAQKNSLDRH------MVKHTGEKEKPFTCGECGYSTGDRFRLSLHMRK 695
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K +KC C Y A QK L H+
Sbjct: 696 HTGEKPYKCDQCDYSAAQKNSLDRHM 721
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYK-FICVACDYFTIISQNMRNHTLI 108
P C C+ ++++ N L H MV+ K K F C C Y T + H
Sbjct: 1638 PYKCDQCE-YSAAQKNSLDRH------MVKHTGEKEKPFTCGECGYSTGDRFRLSLHMRK 1690
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K +KC C Y A QK L H+
Sbjct: 1691 HTGEKPYKCDQCDYSAAQKNSLDRHM 1716
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H G+K +KC C Y K L HV
Sbjct: 1212 YMCGECGYRTTMRSDLSRHIRTHTGEKTYKCDQCKYSTSHKYHLDRHV 1259
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY ++ H H G+K +KC C Y A QK L H+
Sbjct: 702 YKCDQCDYSAAQKNSLDRHMAKHTGEKPYKCDQCDYSAAQKNSLDRHM 749
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY ++ H H G+K +KC C Y A QK L H+
Sbjct: 1697 YKCDQCDYSAAQKNSLDRHMAKHTGEKPYKCDQCDYSAAQKNSLDRHM 1744
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T + + H H G+K +KC C Y A QK L H+
Sbjct: 148 YMCEECGFRTAVRSQISVHMRKHTGEKPYKCDQCEYSATQKRNLDRHM 195
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
F +++ + L+EH +R + F C CDY + N+ H H G+K + C
Sbjct: 2947 GFRTANRSNLLEH-------MRTHTGEKPFKCDQCDYSSAKKNNLDRHMFEHAGEKPYMC 2999
Query: 118 CLCSYGAYQKEKLQFHVK 135
C Y + L H K
Sbjct: 3000 GECGYSTANRTHLLDHAK 3017
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C CD+ + H H G+K +KC C Y A QK L H+ KH+
Sbjct: 91 FACSDCDFRASSKCFLLRHIRKHTGEKPYKCDQCDYAAAQKSSLDKHIIAKHT 143
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 14/96 (14%)
Query: 50 PQSCKHC---KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C HC +S VN + +H+ P F C C+Y +N+ H
Sbjct: 1155 PYKCDHCDYSAALKTSLVNHMRKHTGEKP-----------FKCDQCEYSATQKKNLDRHM 1203
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K + C C Y + L H++ K
Sbjct: 1204 AKHTGEKPYMCGECGYRTTMRSDLSRHIRTHTGEKT 1239
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 85 YKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
YK CDY T N+ H L H G++ + C C Y A QK L H++
Sbjct: 870 YKCDHSECDYVTSSKFNLDRHVLKHTGNRPYMCGECGYRAAQKISLSRHMR 920
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 85 YKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
YK CDY T N+ H L H G++ + C C Y A QK L H++
Sbjct: 1865 YKCDHSECDYVTSSKFNLDRHVLKHTGNRPYMCGECGYRAAQKISLSRHMR 1915
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M + P +C C T+ + +LL +R + + C CDY
Sbjct: 2371 HMVIHSGEKPYACGECGYRTARNSDLLKH--------LRIHTGERPYRCDQCDYSAGWKA 2422
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+ H H GDK + C C Y + L H++
Sbjct: 2423 NLDRHLAKHTGDKPYMCGECGYRTIVRSSLATHMR 2457
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC ++ ++ L H +V + + C C + T ++ H H
Sbjct: 1581 PYKCDHC-DYAAAQKTTLDRH------IVAKHSGEKSYKCEECGFRTAYRSSLILHMRKH 1633
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C Y A QK L H+
Sbjct: 1634 TGEKPYKCDQCEYSAAQKNSLDRHM 1658
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+Y N++NH H GDK + C C Y L+ HV+
Sbjct: 2664 YKCHLCEYSAAEKGNLKNHLAQHTGDKPYMCGQCDYSTTNLANLRTHVR 2712
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C + T N+ H H G+K FKC C Y + +K L H+
Sbjct: 2942 MCGECGFRTANRSNLLEHMRTHTGEKPFKCDQCDYSSAKKNNLDRHM 2988
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+IC C Y T ++ H + H G+K +KC C Y +K L H
Sbjct: 204 YICEECGYRTADRSHLSRHMVKHTGEKPYKCDQCEYSTSRKYHLDRH 250
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C CDY T N+R H H G+K +KC C + L+ H
Sbjct: 2692 YMCGQCDYSTTNLANLRTHVRKHTGEKPYKCDQCDFSCSSTGSLKRH 2738
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C CDY T N+ H H G K ++C LC + + +K L H+
Sbjct: 3082 CDQCDYSTSRKPNLDRHMFKHSGGKPYRCHLCDHSSAEKSDLDQHM 3127
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQK 127
F+C C Y T+ ++ H H G+K +KC C + A K
Sbjct: 786 FMCGECGYKTVERSDLSRHMRTHTGEKPYKCDQCEFSASSK 826
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQK 127
F+C C Y T+ ++ H H G+K +KC C + A K
Sbjct: 1781 FMCGECGYKTVERSDLSRHMRTHTGEKPYKCDQCEFSASSK 1821
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H +K +KC LC Y A +K L+ H+
Sbjct: 2636 YMCGECGYRAAQKVSLSRHMRTHTDEKPYKCHLCEYSAAEKGNLKNHL 2683
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T ++ H +H G K +KC C + A QK +L H+
Sbjct: 3136 YMCEECGFRTAYRSSLSVHKRLHTGVKSYKCDQCDFSALQKAQLTQHM 3183
>gi|260831894|ref|XP_002610893.1| hypothetical protein BRAFLDRAFT_126281 [Branchiostoma floridae]
gi|229296262|gb|EEN66903.1| hypothetical protein BRAFLDRAFT_126281 [Branchiostoma floridae]
Length = 370
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 38 TCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
T PN S P +C C T ++L +R K F+C CD+ T
Sbjct: 245 TTPNKS------PYACTQCDYITERRIHLT--------AHMRKHTGKKPFVCRLCDFRTA 290
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+M+ H H G K FKC LC Y A + ++ H+ +HS +
Sbjct: 291 YRCSMKQHMQTHTGAKPFKCKLCDYRAARSTQITSHMIGQHSNE 334
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIH-LGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
F C CDY ++ +++ H +H G+K KC LC Y A K L H+++ H+T
Sbjct: 192 FKCKQCDYSAVVKRDLHKHIQVHHTGEKPHKCTLCGYRAAHKRGLAAHMRSNHTT 246
>gi|224049595|ref|XP_002195893.1| PREDICTED: RE1-silencing transcription factor-like [Taeniopygia
guttata]
Length = 893
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
IC C+Y T N + H +H+ +QF C +C Y A +K LQ+H+K++H
Sbjct: 362 LICPHCNYKTADRSNFKKHVELHINPRQFLCPVCDYAASKKCNLQYHIKSRH 413
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C YF+ N H H G++ ++C +C Y + QK L H++
Sbjct: 277 YTCSECSYFSDRKNNYIQHIRTHTGERPYQCAMCPYSSSQKTHLTRHMR 325
>gi|260787841|ref|XP_002588960.1| hypothetical protein BRAFLDRAFT_89151 [Branchiostoma floridae]
gi|229274132|gb|EEN44971.1| hypothetical protein BRAFLDRAFT_89151 [Branchiostoma floridae]
Length = 748
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C+ C + +L L +H+ + P ++C C+Y T++ ++ H
Sbjct: 524 PYKCEQCDYSAARKGSLDQHLAKHTGDKP-----------YMCGECEYRTVLKSDLSRHM 572
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
H GDK +KC C Y A QK L H+ N K
Sbjct: 573 RTHTGDKPYKCDHCDYSAAQKSHLDSHLANHTGDK 607
Score = 42.7 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + ++ H H GDK +KC C Y A QK L H+ KH+
Sbjct: 665 YMCGECGYRTALKSDLSRHIRTHTGDKPYKCDQCDYSAAQKSHLDSHLA-KHT 716
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 15/93 (16%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C HC + +L L H+ + P ++C C Y T I + H
Sbjct: 580 PYKCDHCDYSAAQKSHLDSHLANHTGDKP-----------YMCGECGYRTAIKSYISQHM 628
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G+K +KC C Y A +K+ L H+ KH+
Sbjct: 629 RTHTGEKPYKCDQCDYSAARKDSLDQHLA-KHT 660
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 56 CKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQF 115
C +S+ NL+ + N +P K C CDY N+ +H H GDK F
Sbjct: 446 CDQPITSETNLVSQPKSN----TDENPHK----CDQCDYSAAQKSNLDSHLAKHTGDKPF 497
Query: 116 KCCLCSYGAYQKEKLQFHVKNKHSTK 141
C C Y +K L H++ K
Sbjct: 498 MCGECGYRTAKKSHLSIHMRTHSGEK 523
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 15/93 (16%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + NL L +H+ + P F+C C Y T ++ H
Sbjct: 468 PHKCDQCDYSAAQKSNLDSHLAKHTGDKP-----------FMCGECGYRTAKKSHLSIHM 516
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G+K +KC C Y A +K L H+ KH+
Sbjct: 517 RTHSGEKPYKCEQCDYSAARKGSLDQHLA-KHT 548
>gi|349805059|gb|AEQ18002.1| putative re1-silencing transcription factor [Hymenochirus curtipes]
Length = 149
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 38 TCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
T +M + P C+ C ++ +S+ + + H+ +P C CDY T
Sbjct: 28 TGEHMRTHSGEKPFKCEQC-SYVASNQHEVTRHARQVHNGPKP------LTCPHCDYKTA 80
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
N + H +H+ +Q C +C Y A +K LQ+H+K++HS
Sbjct: 81 DRSNFKKHVELHVNPRQLLCPVCDYAASKKCNLQYHIKSRHS 122
>gi|260804320|ref|XP_002597036.1| hypothetical protein BRAFLDRAFT_96185 [Branchiostoma floridae]
gi|229282298|gb|EEN53048.1| hypothetical protein BRAFLDRAFT_96185 [Branchiostoma floridae]
Length = 791
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T IS N+ H IH G+K +KC LC Y A QK L HV
Sbjct: 537 YKCEDCGYRTAISTNLSRHMRIHTGEKPYKCDLCDYSAAQKVALDKHV 584
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 47 SVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
S P C C +++++ + L EH V + ++C C Y T N+ H
Sbjct: 281 SEKPYQCDLC-DYSAAQKSYLDEH-------VAKHTGEKPYMCGECGYRTANKANLSRHV 332
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K +KC LC Y A QK L HV
Sbjct: 333 KTHTGEKPYKCDLCDYSAAQKVALDKHV 360
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T N+ H H G+K +KC LC+Y A QK L H
Sbjct: 593 YMCGECGYRTADRANLSRHMRTHTGEKPYKCDLCNYSAAQKSDLYKH 639
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G+K +KC LC Y A QK L H
Sbjct: 649 YMCGECGYRTADRAKLSRHMRTHTGEKPYKCDLCDYSAAQKSDLYKHA 696
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H G + +KC LC Y A +K L HV
Sbjct: 369 YMCGECGYRTADRANLSRHMRTHTGLRPYKCDLCDYSAARKFNLDKHV 416
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F+C C + T N+ H H G+K FKC LC Y + K L H+
Sbjct: 9 RFMCGICGHRTPDKANIVRHIRRHTGEKPFKCDLCDYSSADKGNLDRHI 57
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y ++ H H G+K +KC C Y + QK+ L HV +KH+
Sbjct: 481 YMCGECGYRRARKSHLSKHVRTHTGEKPYKCDQCDYSSTQKKYLDKHV-DKHT 532
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C + T N+ H H G+K F C +C Y A Q KL H+K
Sbjct: 150 YMCGECYFRTANKSNLAVHMKQHTGEKPFICGVCGYRAAQSTKLSRHMK 198
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+R + F C CDY + N+ H L H G+K + C C + K +L H++
Sbjct: 29 IRRHTGEKPFKCDLCDYSSADKGNLDRHILKHTGEKPYMCGECGFRTTYKSELTIHMR 86
>gi|260834075|ref|XP_002612037.1| hypothetical protein BRAFLDRAFT_227720 [Branchiostoma floridae]
gi|229297410|gb|EEN68046.1| hypothetical protein BRAFLDRAFT_227720 [Branchiostoma floridae]
Length = 361
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ + +LL +H ++ +P ++C C Y TI ++ H + H
Sbjct: 190 PFRCDQC-DYCAPGRHLLDQHVKSKHTSEKP------YMCGECGYRTIDKSHLSKHMMTH 242
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G++ FKC C Y A QK +L H+ KH+
Sbjct: 243 TGERPFKCDRCDYSATQKGRLDEHIVTKHT 272
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 83 VKYKFICV--ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
VK + C C Y T + N+ H H G+ ++C C Y A +KE L H+ +H
Sbjct: 99 VKRTYTCSHGGCGYRTTVKSNLSRHMKTHTGENPYQCDWCDYSAAKKEHLDEHLAVRH 156
>gi|260837226|ref|XP_002613606.1| hypothetical protein BRAFLDRAFT_93649 [Branchiostoma floridae]
gi|229298992|gb|EEN69615.1| hypothetical protein BRAFLDRAFT_93649 [Branchiostoma floridae]
Length = 551
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
+ C C Y + Q ++NH H GDK +KC LC Y A K++LQ H+ KHST
Sbjct: 273 YKCEICGYSATLLQYLKNHMTNHTGDKPYKCELCEYAASTKKRLQEHM-AKHST 325
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
K C C+Y + S + H H G++ F+C C Y A QK L+ H++ KH+
Sbjct: 16 KLTCQFCEYKGVNSSRLEEHVRTHTGERPFQCQQCEYSARQKRVLEMHIRIKHT 69
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C+ C+ S+ L + +HS + P + C CD+ T N+++H
Sbjct: 300 PYKCELCEYAASTKKRLQEHMAKHSTDKP-----------YKCELCDFRTTYRVNLKHHM 348
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
+ H GDK +KC C + A +L+ H+ KHS
Sbjct: 349 VTHTGDKPYKCDACDFSAAHMSRLKRHM-AKHSA 381
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHT-LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
+ C CD+ S + NH H G++ F+C LC + + K LQ H+ KHS+
Sbjct: 74 YRCKHCDFSAASSTVLTNHVRATHTGERPFQCALCDFSSIYKASLQHHIMAKHSS 128
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 19/131 (14%)
Query: 22 NKYVPSDIDVFIGHCQTCPNMSFLNSVI-----------PQSCKHCKNFTSSDVNLLMEH 70
N+++ + DV C+ C + + N + P C C +++S+ + L H
Sbjct: 148 NRHMVNHADVKPYRCELCDHSTNTNHELKRHMATHTGEKPHKCDFC-DYSSTIKSSLKRH 206
Query: 71 SENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
+ D YK C CDY + +++ H + H G+K +KC C Y K L
Sbjct: 207 V----LALHTDEKPYK--CDVCDYTAVSRYSLKQHAVKHTGEKPYKCDTCDYATAVKSSL 260
Query: 131 QFHVKNKHSTK 141
H+K KH+ K
Sbjct: 261 TTHMK-KHTGK 270
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY T + ++ H H G K +KC +C Y A + L+ H+ N
Sbjct: 245 YKCDTCDYATAVKSSLTTHMKKHTGKKPYKCEICGYSATLLQYLKNHMTN 294
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI- 108
P CKHC +F+++ +L H RP F C CD+ +I ++++H +
Sbjct: 73 PYRCKHC-DFSAASSTVLTNHVRATHTGERP------FQCALCDFSSIYKASLQHHIMAK 125
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
H + KC C + K L H+ N
Sbjct: 126 HSSHRPHKCTECDFATVGKSILNRHMVN 153
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 87 FICVACDYFTIISQNMRNHTL-IHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+ C ACD+ T + + H L H G+K FKC +C Y K L+ H+ +
Sbjct: 418 YKCDACDFSTERIERLERHILATHAGEKPFKCEVCGYSTKAKINLKRHMAKR 469
>gi|260832590|ref|XP_002611240.1| hypothetical protein BRAFLDRAFT_207353 [Branchiostoma floridae]
gi|229296611|gb|EEN67250.1| hypothetical protein BRAFLDRAFT_207353 [Branchiostoma floridae]
Length = 525
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
V +F+C C++ N+ HT H G+K +KC C Y A +K L H+ KHS
Sbjct: 8 VDKRFLCTECEFRAASKSNLIKHTRTHTGEKPYKCDQCDYAAARKYTLDIHMAGKHS 64
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 14/102 (13%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVAC 92
C+ +M P C C ++ V+L L +H+ P F+C C
Sbjct: 337 CRLIQHMRKHTGEKPYKCDQCDFSSAHKVSLHLHLSKHAGEKP-----------FMCGQC 385
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+Y T ++ H H G+K +KC C Y A +K L H+
Sbjct: 386 EYRTASRSHLSVHMRRHSGEKPYKCDQCDYSASRKGSLDKHM 427
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T ++ H H G+K +KC C Y A +K L H+
Sbjct: 181 FLCGQCGYRTARRSHLSEHMRRHSGEKPYKCDQCDYSASRKGYLDKHM 228
>gi|260786741|ref|XP_002588415.1| hypothetical protein BRAFLDRAFT_198833 [Branchiostoma floridae]
gi|229273577|gb|EEN44426.1| hypothetical protein BRAFLDRAFT_198833 [Branchiostoma floridae]
Length = 519
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D +++++H+ P ++C C + T I N+ H H G K FKC C Y
Sbjct: 333 DTHIMVKHTGEKP-----------YMCDECGFRTAIRYNLSQHMRTHTGVKPFKCDRCDY 381
Query: 123 GAYQKEKLQFHVKNKHS 139
QK L HVK KH+
Sbjct: 382 STAQKGNLNIHVKTKHT 398
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYK-FICVACDYFTIIS 99
+M V P C C T+ NL + V+ K ++C C Y T +
Sbjct: 364 HMRTHTGVKPFKCDRCDYSTAQKGNLNIH--------VKTKHTGEKAYMCTECGYRTGHN 415
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
N+ H H G+K FKC C Y A +K L H+K KH
Sbjct: 416 ANLSRHMRTHTGEKPFKCDQCDYSAARKGTLDQHIKTKH 454
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M V P C C +++++ L EH M + ++C C Y T S
Sbjct: 103 HMRTHTGVKPFKCDRC-DYSTAQKCHLSEH------MKTKHTGEKAYMCTECGYRTSHSS 155
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H H G+K +KC LC Y A QK L H+ KH+
Sbjct: 156 SFSRHMRTHTGEKPYKCDLCDYSAAQKYPLDQHIMVKHT 194
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYK-FICVACDYFTIISQNMRNHTLI 108
P C C +++++ L +H RP YK ++C C Y T S + H
Sbjct: 198 PYKCDQC-DYSAAQKGTLDQHIMVNHTGERP----YKSYMCTECGYRTSHSSSFSRHMRT 252
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G+K +KC LC Y A QK L H+ KH+
Sbjct: 253 HTGEKPYKCDLCDYSAAQKYPLDQHIMVKHT 283
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T ++ H H G K FKC C Y QK L H+K KH+
Sbjct: 85 YMCDECGYRTSNRYSLSQHMRTHTGVKPFKCDRCDYSTAQKCHLSEHMKTKHT 137
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCS 121
D +++++H+ P + C CDY + H ++ H G++ +KC C
Sbjct: 275 DQHIMVKHTGERP-----------YKCDQCDYSAAQKGTLDQHIMVNHTGERPYKCDQCD 323
Query: 122 YGAYQKEKLQFHVKNKHS 139
Y A +K L H+ KH+
Sbjct: 324 YSATKKGTLDTHIMVKHT 341
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+C C Y S + H H G++ +KC C Y A +K L H+ KH+
Sbjct: 1 MCDECGYRAAYSSALARHMRTHTGERPYKCDQCDYSATRKCHLDEHIMVKHT 52
>gi|260808223|ref|XP_002598907.1| hypothetical protein BRAFLDRAFT_250821 [Branchiostoma floridae]
gi|229284182|gb|EEN54919.1| hypothetical protein BRAFLDRAFT_250821 [Branchiostoma floridae]
Length = 635
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y I+ ++ H H G+K +KC C Y A QK L +H+ KH+
Sbjct: 535 YMCGECGYRAAITSDLSRHMRTHTGEKPYKCNQCDYSAAQKSSLDWHIAAKHT 587
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C HC +++++ + L +H + K ++C C Y T
Sbjct: 74 HMRTHTGEKPYKCDHC-DYSAARKSTLDQH-------LTKHTSKKPYMCGECGYRTARKP 125
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H IH G+K FKC C Y A QK L HV
Sbjct: 126 DLFRHLRIHTGEKPFKCDQCDYSAAQKWDLDKHV 159
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H G+K +KC C Y A K L H+
Sbjct: 315 YMCGECGYRTTHKSNLSKHMRTHTGEKPYKCDHCDYSAAHKSSLDHHL 362
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H H G+K +KC C+Y A QK L H+
Sbjct: 168 YMCGECGYRAARKSTLSEHMRTHTGEKPYKCEECNYSAAQKSTLHKHL 215
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y ++ H H G+K +KC C Y A +K L H+ KH++K
Sbjct: 56 YMCGECGYRAAKKSHLSRHMRTHTGEKPYKCDHCDYSAARKSTLDQHL-TKHTSK 109
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + ++R H H G+K +KC C Y A QK L H+
Sbjct: 259 YMCGECGFQVRYPSDLRRHMRTHTGEKPYKCDQCDYSAAQKCHLDLHL 306
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C HC + +L L +H+ P ++C C Y T
Sbjct: 333 HMRTHTGEKPYKCDHCDYSAAHKSSLDHHLAKHTGEKP-----------YMCEECGYRTT 381
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H +K +KC C Y A +K L HV
Sbjct: 382 NKSDLSRHMRTHTSEKPYKCDQCDYSAARKFDLDRHV 418
>gi|261289263|ref|XP_002603074.1| hypothetical protein BRAFLDRAFT_259516 [Branchiostoma floridae]
gi|229288391|gb|EEN59086.1| hypothetical protein BRAFLDRAFT_259516 [Branchiostoma floridae]
Length = 204
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S+D + L +H K F+C C Y + + NH + H
Sbjct: 66 PYKCDQC-DYCSADKSKLDQHK----MFKHSGDYKKPFVCGECGYRAALKHQLTNHMVTH 120
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+K +KC C Y A +K+ L HV+ KHS +
Sbjct: 121 TNEKPYKCDQCDYAAARKDNLDRHVQIKHSGE 152
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
FIC C Y T I N+ H H G+K +KC C Y + K KL H KHS K
Sbjct: 39 FICGECGYRTAIRCNLYRHLKTHTGEKPYKCDQCDYCSADKSKLDQHKMFKHSGDYK 95
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T + ++ H IH GDK FKC C+Y A ++ L HV+
Sbjct: 155 YKCGECGYETAVKGSLTVHMRIHTGDKPFKCAQCNYSASRQRDLIQHVR 203
>gi|260824798|ref|XP_002607354.1| hypothetical protein BRAFLDRAFT_204993 [Branchiostoma floridae]
gi|229292701|gb|EEN63364.1| hypothetical protein BRAFLDRAFT_204993 [Branchiostoma floridae]
Length = 656
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 50 PQSCKHCKNFTSSDVNLLMEH-SENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
P CK C F+++ +N+L +H + + + +F C C + T + H L+
Sbjct: 57 PLKCKQC-GFSANQLNVLTKHMAVHTKKEAAKNDTPKRFRCRECGFSTAYKHTLTKHMLL 115
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H GD+ +KC CSY ++ L+ H+K
Sbjct: 116 HGGDRPYKCEQCSYATIRQAHLRVHMK 142
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y T +++ H L H G++ +KC CSY A +K L+ H+K +H+ K
Sbjct: 396 FQCKECSYSTAYKADLKRHQLRHGGERPYKCDQCSYAAIEKLNLRRHMK-RHTAK 449
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C C Y T + N++ H L H GDK +KC C+Y A +K++ HVK+
Sbjct: 3 FKCGVCSYSTAVRSNLKVHMLRH-GDKPYKCDRCNYAAIRKKQFLAHVKH 51
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y + Q ++ HTL H G+K KC CSY +K L H+K
Sbjct: 203 FKCKECSYSSPHKQTLKRHTLTHSGEKPHKCDQCSYATIRKSNLLIHMK 251
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C C Y T +++ H L H G++ +KC C Y A +K L H++
Sbjct: 308 FQCKECGYSTAYKGDLKRHQLRHGGERPYKCDKCPYAAIEKLTLLRHIER 357
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 90 VACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
V C Y T ++ +++ H + H DK KC C Y A K KL H+K
Sbjct: 483 VNCGYATDLTSDLKRHIVRHGVDKPHKCHKCPYAAMSKSKLLIHLK 528
>gi|260808213|ref|XP_002598902.1| hypothetical protein BRAFLDRAFT_107338 [Branchiostoma floridae]
gi|229284177|gb|EEN54914.1| hypothetical protein BRAFLDRAFT_107338 [Branchiostoma floridae]
Length = 1141
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++++ + L +H + + ++C C Y T +
Sbjct: 573 HMRTHTGEKPYRCDQC-DYSAAEKSTLDDH-------ITKHTGQKPYMCGECGYRTALRA 624
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
N+ H H G K +KC C+Y A +K L FHVK K+
Sbjct: 625 NLSRHMKTHTGGKLYKCDQCNYSAARKSALSFHVKRHTGEKL 666
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C + T + + H H G+K +KC LC Y A QK L H++
Sbjct: 66 YMCGECGFSTTLKSTLSRHMRTHTGEKPYKCHLCDYSAAQKTPLDVHLR 114
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M S P C C +++++ + L +H M++ K ++C C + T
Sbjct: 236 HMRTHTSEKPYKCDQC-DYSAARKSTLDDH------MIKHTGEK-PYMCGECGFRTARKS 287
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H IH G+K +KC C Y A QK L H+
Sbjct: 288 DLSKHMRIHTGEKPYKCDQCDYSAAQKSHLDQHL 321
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G+K +KC C Y A QK L +H+
Sbjct: 835 YMCGECGYRTTHKSALSKHMRTHTGEKPYKCDQCDYSAAQKSHLDYHL 882
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y N+ H H G+K FKC C Y A +K L HV+
Sbjct: 723 YMCDECGYRAAHKSNLSRHMKTHTGEKPFKCDQCDYSATRKSTLYQHVE 771
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T + + H H G+K +KC C Y A QK L H+
Sbjct: 10 YKCEECGYRTAQNYTLSKHMRTHTGEKPYKCDQCDYSATQKSSLDLHL 57
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY T + H H GDK +KC C Y A +K L H+
Sbjct: 667 YKCDHCDYSTTQKSSFDIHLARHTGDKPYKCDQCDYSAARKSHLDLHL 714
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T + H H G+K +KC C Y A QK L H+
Sbjct: 891 YNCGECGYRTTHKSALSKHMRTHTGEKPYKCDQCDYSAAQKSNLDNHL 938
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C + T + H + H G+K +KC C Y K L H++N
Sbjct: 122 YMCGECGFRTAQKSTLSKHIITHTGEKPYKCKECGYKTAYKSDLSKHMRN 171
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 20/116 (17%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCM-----------------VRP 80
+M P C C T+ NL L +H+ + P M +R
Sbjct: 988 HMRTHTGEKPYKCDQCDYATAQKFNLHQHLTKHTGDKPYMCGECGHRTAHKFDLSVHMRT 1047
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ + C CDY + N+ H H +K + C C Y A Q+ L H++
Sbjct: 1048 HTGEKPYKCDQCDYSAAVKSNLNKHLAKHTNEKPYMCGECGYRAAQESTLSEHMQT 1103
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P +C C + ++ + L +H +R + + C CDY N+ NH + H
Sbjct: 890 PYNCGEC-GYRTTHKSALSKH-------MRTHTGEKPYKCDQCDYSAAQKSNLDNHLVKH 941
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K + C C + + + L H+K
Sbjct: 942 TGEKPYMCGECGFRSAGRSTLSRHMKT 968
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T ++ H H G+K +KC C Y A K L H+
Sbjct: 150 YKCKECGYKTAYKSDLSKHMRNHTGEKPYKCDQCDYSAAWKSSLDLHL 197
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY + H H G+K + C C Y QK L H+++
Sbjct: 751 FKCDQCDYSATRKSTLYQHVEKHTGEKPYMCGECGYRTNQKSTLSIHMRS 800
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H H G+K + C C Y A QK L H++
Sbjct: 414 YKCDQCDYAAAWKSHLDKHVTKHTGEKPYMCGECGYRAAQKINLTVHMR 462
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M V P C C +++++ + L +H +P ++C C Y T
Sbjct: 460 HMRMHTGVKPYKCDQC-DYSAAHKSSLYKHRLAKHTGEKP------YLCGECGYRTADRS 512
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H +K +KC C Y A +K L H+
Sbjct: 513 TLSRHMRTHTREKSYKCDQCDYSAAEKFALVQHL 546
>gi|387019077|gb|AFJ51656.1| RE1-silencing transcription factor-like [Crotalus adamanteus]
Length = 890
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
C CDY T N + H +H+ +QF C +C Y A +K LQ+H+K++H
Sbjct: 364 LACPHCDYKTADRSNFKKHVELHVSPRQFLCPVCEYAASKKCNLQYHIKSRH 415
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C YF+ N H H G++ ++C +C Y + QK L H++
Sbjct: 279 YTCSQCSYFSDRKNNYVQHIRTHTGERPYRCSMCPYSSSQKTHLTRHMR 327
>gi|260795993|ref|XP_002592989.1| hypothetical protein BRAFLDRAFT_275725 [Branchiostoma floridae]
gi|229278213|gb|EEN49000.1| hypothetical protein BRAFLDRAFT_275725 [Branchiostoma floridae]
Length = 476
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M+ P C HC + L L +HS + P ++C C Y T
Sbjct: 26 HMAIHTGEKPYKCSHCDYSAAQKGTLKRHLAKHSGDKP-----------YMCGQCGYRTA 74
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+N+ H H G+K +KC C Y A +K L+ H+ HS++
Sbjct: 75 QKRNLSEHMRTHTGEKPYKCDQCDYSAARKSTLKQHLAFTHSSE 118
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C+Y T + H IH G+K +KC C Y A QK L+ H+ KHS
Sbjct: 8 YMCGECEYRTARKVHFSAHMAIHTGEKPYKCSHCDYSAAQKGTLKRHLA-KHS 59
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 52 SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
+C C +++++++ L +H E DP YK C CD+ + + H IH G
Sbjct: 357 TCGEC-GYSTTEISALSQHME-----THTDPEPYK--CDQCDFSAVKKYELDRHLEIHAG 408
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVKN 136
D+ + C C + K L H++
Sbjct: 409 DRPYMCGECGFRTADKSTLSGHMRT 433
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +F++S + L +H + R K ++C C Y T + H H
Sbjct: 176 PYKCDQC-DFSASQKSYLNKH------LARHTGDK-PYMCGECGYRTTQKAYLSQHMRTH 227
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C Y A K L H+
Sbjct: 228 TGEKPYKCDQCDYSAALKSTLDSHI 252
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + + +H H DK + C C Y QK L H++
Sbjct: 233 YKCDQCDYSAALKSTLDSHIATHTNDKPYMCGECGYRTAQKSTLSGHMRT 282
>gi|260823134|ref|XP_002604038.1| hypothetical protein BRAFLDRAFT_71672 [Branchiostoma floridae]
gi|229289363|gb|EEN60049.1| hypothetical protein BRAFLDRAFT_71672 [Branchiostoma floridae]
Length = 360
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y T++ ++ H H GDK +KC C Y A QK L H +N
Sbjct: 278 YMCGECGYRTVLKSDLSRHLRTHTGDKPYKCDQCDYSAIQKHSLDRHKRN 327
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T + NM H H G+K +KC C Y A Q L H++
Sbjct: 84 YKCGECGYRTALKANMSGHMRTHTGEKPYKCGECGYWAAQMTSLFLHMR 132
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++D L H + +P ++C C + T
Sbjct: 186 HMRTHTGEKPYKCDQC-DYSAADRTTLSYHQDQ---HTKP------YMCGECGHRTASKS 235
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H H G+K +KC C Y A QK L H+ +KH+ +
Sbjct: 236 HLSLHMRTHTGEKPYKCDQCDYSAAQKSSLGKHL-SKHTGE 275
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y ++ H H G+K +KC C Y A + L +H
Sbjct: 168 YMCGECGYRAAHKHHLSRHMRTHTGEKPYKCDQCDYSAADRTTLSYH 214
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY I ++ H H GDK F C C + +K L H+K
Sbjct: 306 YKCDQCDYSAIQKHSLDRHKRNHAGDKPFMCEECGFRTARKSVLTLHMK 354
>gi|260833931|ref|XP_002611965.1| hypothetical protein BRAFLDRAFT_60349 [Branchiostoma floridae]
gi|229297338|gb|EEN67974.1| hypothetical protein BRAFLDRAFT_60349 [Branchiostoma floridae]
Length = 473
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 50 PQSCKHCKNFTSSDVNLL----MEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
P C HC ++++ + L +H+ VR + K++ C C+Y TI ++M H
Sbjct: 71 PYRCGHC-DYSAVQKDALKRHVAKHTGEGKTKVRKERKKHR--CPHCEYETIRKESMTVH 127
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G++ ++C C Y A QK ++ H+++KH+
Sbjct: 128 IRTHTGERPYQCQHCHYSAAQKTQIARHIQSKHT 161
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT-LI 108
P C+ C +++++ L +H + VRP + C CDY + H +
Sbjct: 13 PYKCQQC-DYSAAQRGTLKQHVQAVHTGVRP------YQCQQCDYSAAQKGRLNQHVKAV 65
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
H G++ ++C C Y A QK+ L+ HV KH+ + K
Sbjct: 66 HSGERPYRCGHCDYSAVQKDALKRHV-AKHTGEGK 99
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 43 SFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNM 102
L P SC+ C ++ +S+ +LL H M + K F C CDY T +
Sbjct: 208 GHLKEHKPYSCELC-SYAASEKSLLKLH------MAKHTGEK-PFKCKVCDYSTAAKSCL 259
Query: 103 RNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++H++ H G+K +KC C Y A L+ H+ N
Sbjct: 260 KSHSVTHTGEKPYKCKFCDYCAVSMSYLKSHMAN 293
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 41 NMSFLNSVI-------PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACD 93
+MS+L S + P C+HC F+++ +L H V V+ + C C+
Sbjct: 283 SMSYLKSHMANHAKEKPFHCEHC-GFSTARKEILRGH-------VATHNVEKPYRCELCN 334
Query: 94 YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ T +++ H H G+K + C +C Y QK L+ H+
Sbjct: 335 FSTNHKHDLKRHIATHTGEKPYNCDICGYATSQKHYLRDHM 375
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 38/102 (37%), Gaps = 14/102 (13%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M+ P C+ C FT+ L + H+ P C CDY
Sbjct: 374 HMTKHTGEKPYQCEQCGYFTAQKARLANHMKTHTGEKP-----------HKCEVCDYAAA 422
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ +R H H K KC C Y K L+ HVK KH+
Sbjct: 423 VKGTLRQHMATHAVVKPHKCDQCDYSGTLKAHLKRHVKTKHA 464
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
C +C + + ++ GH T N P C+ C NF+++ + L H
Sbjct: 302 CEHCG-FSTARKEILRGHVAT------HNVEKPYRCELC-NFSTNHKHDLKRH------- 346
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ + + C C Y T +R+H H G+K ++C C Y QK +L H+K
Sbjct: 347 IATHTGEKPYNCDICGYATSQKHYLRDHMTKHTGEKPYQCEQCGYFTAQKARLANHMKT 405
>gi|327279940|ref|XP_003224713.1| PREDICTED: RE1-silencing transcription factor-like [Anolis
carolinensis]
Length = 900
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+C C+Y T N + H +H+ +QF C +C Y A +K LQ+H+K++H
Sbjct: 361 LVCPHCEYKTADRSNFKKHVELHISPRQFLCPVCEYAASKKCNLQYHIKSRH 412
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C+ C YF+ N H H G++ ++C +C Y + QK L H++
Sbjct: 276 YTCLQCSYFSDRKNNYVQHIRTHTGERPYQCTMCPYSSSQKTHLTRHMR 324
>gi|260787859|ref|XP_002588969.1| hypothetical protein BRAFLDRAFT_125437 [Branchiostoma floridae]
gi|229274141|gb|EEN44980.1| hypothetical protein BRAFLDRAFT_125437 [Branchiostoma floridae]
Length = 233
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C+Y T++ ++ H H GDK +KC C Y A QK L H+ N
Sbjct: 38 YMCGECEYRTVLKSDLSRHIRRHTGDKPYKCDQCDYSAAQKSHLDSHLAN 87
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C+Y T + ++ H H GDK +KC C Y A QK L H+
Sbjct: 150 YMCGECEYSTALKSDLSRHIRTHTGDKPYKCDQCDYSAAQKSHLDSHL 197
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T I + H H G+K +KC C Y A +K+ L H+
Sbjct: 94 YMCGECGYRTAIKSYISQHMRTHTGEKPYKCDQCDYSAARKDSLNQHL 141
>gi|260836038|ref|XP_002613014.1| hypothetical protein BRAFLDRAFT_74799 [Branchiostoma floridae]
gi|229298396|gb|EEN69023.1| hypothetical protein BRAFLDRAFT_74799 [Branchiostoma floridae]
Length = 624
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++ + L +H +V+P +IC C Y T ++ H H
Sbjct: 27 PYKCDQC-DYSAAGKSTLNQHLRAKHTLVKP------YICWECGYSTAKRNHLSRHMRTH 79
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K FKC C Y A QK L H++N
Sbjct: 80 TGEKPFKCDQCDYSAAQKYYLDEHLRN 106
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVAC 92
C +M P C C S NL L +H+ N P ++C C
Sbjct: 512 CDLAKHMRIHTGDKPFKCDQCDYSASVKSNLRHHLAKHTGNKP-----------YMCGDC 560
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
Y T N+ H H G+K ++C +C+Y A +K +L H++
Sbjct: 561 GYRTARKYNLSLHMRTHTGEKPYRCNMCNYSAAKKAQLSLHLR 603
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ L EH +R ++C C Y T
Sbjct: 75 HMRTHTGEKPFKCDQC-DYSAAQKYYLDEH-------LRNHTGDKAYMCGECGYKTSQRS 126
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H H G+K FKC C Y A QK L+ HV KH+
Sbjct: 127 KLPVHMRTHTGEKPFKCDQCGYSAAQKASLEKHVAAKHT 165
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C+Y T ++ H IH GDK FKC C Y A K L+ H+
Sbjct: 499 FMCRECEYKTASKCDLAKHMRIHTGDKPFKCDQCDYSASVKSNLRHHL 546
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P +C HC +F++S L H P F+C C Y + N+ H +H
Sbjct: 358 PFNCDHC-DFSASHKFTLENHRAK---HTGEKP----FMCGECGYRSTQRANLTRHMKMH 409
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K FKC C + A QK L H+
Sbjct: 410 TGEKSFKCDQCDFSATQKSNLVQHM 434
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
V+ ++C C Y ++ H H G+K FKC C Y A QK L H+ KHS K
Sbjct: 166 VEKPYMCGECGYRAAQKVHLSQHMRTHTGEKPFKCDQCDYSAAQKTALDLHLA-KHSGK 223
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+C C Y T + H H G+K +KC C Y A K L H++ KH+
Sbjct: 1 MCRECGYSTAKKSHFSEHVRTHTGEKPYKCDQCDYSAAGKSTLNQHLRAKHT 52
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y + H IH G+K +KC C Y A QK L H+
Sbjct: 443 FMCGECGYRAAQKSTLSTHMRIHTGEKPYKCDQCDYSAIQKFSLDQHL 490
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CD+ N+ H H G+K F C C Y A QK L H++
Sbjct: 415 FKCDQCDFSATQKSNLVQHMTKHTGEKPFMCGECGYRAAQKSTLSTHMR 463
>gi|260818930|ref|XP_002604635.1| hypothetical protein BRAFLDRAFT_92869 [Branchiostoma floridae]
gi|229289963|gb|EEN60646.1| hypothetical protein BRAFLDRAFT_92869 [Branchiostoma floridae]
Length = 479
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M + P C HC +++++ + L H + + ++C C Y T
Sbjct: 239 HMRIHTAEKPYKCDHC-DYSAAQKSNLDHH------QLAKHTCEKSYMCWECGYNTANRY 291
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
N+ +H H G+K +KC C Y A K L +H+K KHS
Sbjct: 292 NLSHHMKSHTGEKPYKCHQCDYSALYKSGLSYHLKTKHS 330
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+IC C Y T+ ++ H H G+K FKC C Y A QK+ L H KHS++
Sbjct: 108 YICGECGYKTVGKSHLSKHMRTHTGEKPFKCNQCDYSATQKQHLDQHCLVKHSSE 162
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+IC C Y T N+ H IH +K +KC C Y A QK L H KH+
Sbjct: 221 YICGECGYRTAKRSNLSQHMRIHTAEKPYKCDHCDYSAAQKSNLDHHQLAKHT 273
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C T+ NL H V + ++C C Y T ++ H H
Sbjct: 362 PYKCDQCDYSTAWKANLGKHH-------VAKHTGEKPYMCEKCGYRTAQKSHLSEHMRSH 414
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C Y A K LQ+H+
Sbjct: 415 TGEKPYKCDQCDYSAAHKSTLQYHL 439
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 33 IGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVAC 92
+G +M P C C +++++ L +H C+V+ K ++C C
Sbjct: 118 VGKSHLSKHMRTHTGEKPFKCNQC-DYSATQKQHLDQH-----CLVKHSSEK-PYMCGEC 170
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+Y T + HT +H G K FKC C Y A K L +H+
Sbjct: 171 EYKTASRYLLSQHTKVHGGKKPFKCHQCDYSALYKSTLDYHL 212
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y ++ H IH ++ + C C Y A QK L+ H KHS
Sbjct: 15 YMCGECGYRAAQRSHLSQHMRIHTAERPYNCDQCDYSAAQKSNLEQHQLAKHS 67
>gi|391334830|ref|XP_003741803.1| PREDICTED: methyltransferase-like protein 17, mitochondrial-like
[Metaseiulus occidentalis]
Length = 408
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F C C+Y T N++ HT +H G + + C CSY A Q E L+ HV H+ V
Sbjct: 345 FQCNQCNYQTPYQGNLKRHTRVHTGQRPYPCGYCSYSATQLENLKRHVVKLHANAV 400
>gi|260806372|ref|XP_002598058.1| hypothetical protein BRAFLDRAFT_108631 [Branchiostoma floridae]
gi|229283329|gb|EEN54070.1| hypothetical protein BRAFLDRAFT_108631 [Branchiostoma floridae]
Length = 706
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 60 TSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL 119
T D+++ +H+ P ++C C Y T N+ H IH G+K +KC
Sbjct: 409 TQLDLHMAAKHTGEKP-----------YMCEKCGYKTTQKCNLSQHMRIHTGEKPYKCKQ 457
Query: 120 CSYGAYQKEKLQFHVKNKHSTKVK 143
C Y A K L FH+ +KH+ + +
Sbjct: 458 CDYSAAGKSTLDFHIASKHNGEKR 481
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H H G+K +KC C Y A QK L H+ KHS
Sbjct: 55 YMCGECGYRTTQKSELSRHMRTHTGEKPYKCDQCDYSAAQKIILDNHIAAKHS 107
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C HC +++++ + L H +V K F C C+Y T
Sbjct: 529 HMRTHTGEKPYKCDHC-DYSATQSSALARH------LVTHTSDK-PFKCGECEYRTGHKA 580
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H IH G+ +KC C Y A +K L H+ KH+
Sbjct: 581 YLSRHRRIHTGENPYKCEQCDYSAVRKGTLDKHIAAKHT 619
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y TI + H H G+K +KC C Y A +K L H K KHS
Sbjct: 198 YMCGECGYRTIHKYQLTEHMRSHTGEKPYKCDQCDYSAARKSTLAKH-KAKHS 249
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C Y T ++ H H +K +KC C Y A +K L HV KH+
Sbjct: 310 YTCGECGYRTAHKAHLSQHLRTHTEEKPYKCDQCDYSAARKSHLDSHVARKHT 362
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CD+ T+ ++ H +IH GDK + C C Y K L H++
Sbjct: 282 YKCDQCDFTTVRKSSLDYHLMIHTGDKPYTCGECGYRTAHKAHLSQHLR 330
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + + H H G+K +KC C Y A Q L H+
Sbjct: 511 YMCGECGYRTTLKTYLSQHMRTHTGEKPYKCDHCDYSATQSSALARHL 558
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T + H H G+K +KC C + A K L HVK KH+
Sbjct: 141 YMCGECGFRTAHRSYISEHMRTHTGEKPYKCDQCDFSAACKPNLDTHVKAKHT 193
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CDY + NH H G+K +KC C Y A QK L H+ KHS
Sbjct: 83 YKCDQCDYSAAQKIILDNHIAAKHSGEKPYKCNQCDYSAVQKVHLDNHIAAKHS 136
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + H H GDK F C C Y A QK L H++
Sbjct: 226 YKCDQCDYSAARKSTLAKHKAKHSGDKPFMCGECGYRATQKYILTQHMR 274
>gi|260835610|ref|XP_002612801.1| hypothetical protein BRAFLDRAFT_233052 [Branchiostoma floridae]
gi|229298181|gb|EEN68810.1| hypothetical protein BRAFLDRAFT_233052 [Branchiostoma floridae]
Length = 374
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D+++ +H+ P ++C C Y T + H IH G+K +KC C Y
Sbjct: 218 DIHIAAKHTGENP-----------YMCEECGYRTFQRSALSRHMRIHTGEKPYKCDFCDY 266
Query: 123 GAYQKEKLQFHVKNKHS 139
A QK L +H+ KH+
Sbjct: 267 SASQKHYLDYHMAAKHT 283
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 15/103 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLL----MEHSENCPCMVRPDPVKYKFICVACDYFT 96
+M P C C T+ NL+ +H+ + P ++C C Y
Sbjct: 18 HMRIHTGEKPYKCDQCDYSTAEKGNLIRHITAKHNGDKP-----------YMCGECGYRA 66
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
I + H H G+K +KC C Y A QK L H+ HS
Sbjct: 67 AIWSTLSQHIRTHTGEKPYKCDQCDYSAAQKGTLDKHIAATHS 109
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 11/93 (11%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTI---ISQNMRNHT 106
P C C + T+ LL+ +R + + C CDY ++ HT
Sbjct: 142 PYMCGECGHRTTHKSMLLIH--------MRTHTGEKPYKCDQCDYSAAQKSTKHDLSRHT 193
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G+K +KC C Y A +K L H+ KH+
Sbjct: 194 RTHTGEKPYKCDQCDYSAARKSHLDIHIAAKHT 226
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 28/123 (22%)
Query: 36 CQTCPNMSFLNSVI-----------PQSCKHCKNFTSS-----DVNLLMEHSENCPCMVR 79
C+ C +F S + P C C ++++S D ++ +H+ + P M
Sbjct: 233 CEECGYRTFQRSALSRHMRIHTGEKPYKCDFC-DYSASQKHYLDYHMAAKHTGDKPNM-- 289
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C Y + ++ H H G++ +KC C Y A +K L H+ KH
Sbjct: 290 ---------CGECGYRAVKKHDLSRHMRTHTGEQPYKCDKCDYSAARKTHLNHHLAAKHG 340
Query: 140 TKV 142
+
Sbjct: 341 GDI 343
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+C C Y T+ ++ H IH G+K +KC C Y +K L H+ KH+
Sbjct: 1 MCGQCGYRTVNKGHLSKHMRIHTGEKPYKCDQCDYSTAEKGNLIRHITAKHN 52
>gi|427780001|gb|JAA55452.1| Putative gonadotropin inducible transcription factor [Rhipicephalus
pulchellus]
Length = 824
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 14 TKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL---LMEH 70
+++TC C + SD H Q + V P C C + ++ L L +H
Sbjct: 630 SQQTCELCQRTF-SDSKCLRKHHQ-----AVHGKVKPYVCSFCGHMSARKAMLQLHLRQH 683
Query: 71 SENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
+ P F C C+Y T ++R H + H G K +KC C Y Q
Sbjct: 684 TGEKP-----------FACNLCEYRTGDHNSLRRHKMRHSGTKPYKCPHCPYACIQAISY 732
Query: 131 QFHVKNKH 138
+ H+KNKH
Sbjct: 733 KMHMKNKH 740
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 51 QSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
Q+C+ C+ T SD L +H + V+P ++C C + + ++ H H
Sbjct: 632 QTCELCQR-TFSDSKCLRKHHQAVHGKVKP------YVCSFCGHMSARKAMLQLHLRQHT 684
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K F C LC Y L+ H K +HS
Sbjct: 685 GEKPFACNLCEYRTGDHNSLRRH-KMRHS 712
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
CV C+Y T + + NH IH ++ F C C G Q +L+ H
Sbjct: 569 CVQCEYRTFSAFKLENHARIHSEERDFTCAQCGKGFKQLSQLRNH 613
>gi|260832606|ref|XP_002611248.1| hypothetical protein BRAFLDRAFT_277208 [Branchiostoma floridae]
gi|229296619|gb|EEN67258.1| hypothetical protein BRAFLDRAFT_277208 [Branchiostoma floridae]
Length = 237
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M V P C HC T+ NL L++H+ P +IC C + T
Sbjct: 149 HMRTHTGVKPYKCDHCDYSTAQKSNLDTHLVKHTGEKP-----------YICKECGFMTA 197
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC C Y A QK L H+
Sbjct: 198 DRSSLTRHMRRHTGEKPYKCDQCDYSAAQKFALDLHL 234
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 77 MVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
V+P V F C CDY + HT H G+K +KC C Y A K L H+ N
Sbjct: 66 AVKP-TVDKPFACTECDYRATTRARLSIHTRRHTGEKPYKCDQCEYSAAHKRSLDIHLAN 124
>gi|260823078|ref|XP_002604010.1| hypothetical protein BRAFLDRAFT_71701 [Branchiostoma floridae]
gi|229289335|gb|EEN60021.1| hypothetical protein BRAFLDRAFT_71701 [Branchiostoma floridae]
Length = 651
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y T++ ++ H H GDK +KC C Y A QK L H +N
Sbjct: 420 YMCDECGYRTVLKSDLSRHLRTHTGDKPYKCDQCDYSAIQKHSLDRHKRN 469
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L +H+ P ++C C + T
Sbjct: 74 HMRTHTGEKPYKCDQCDYSAAQKYNLDKHLAKHTGEKP-----------YMCGECGHRTA 122
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
+ H H G+K +KC C Y A QK +L H+ +KH+ +++
Sbjct: 123 SKSRLSRHMRTHTGEKPYKCDQCDYSAAQKSRLDQHL-SKHTEPIQE 168
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D +L+++H+ P ++C C Y N+ H H G K +KC C Y
Sbjct: 520 DRHLVVKHTGEKP-----------YMCGECGYRVAQKSNLSRHVATHTGVKPYKCDQCDY 568
Query: 123 GAYQKEKLQFHV 134
A QK L+ H+
Sbjct: 569 SAAQKSTLKIHL 580
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY I ++ H H GDK F C C +G +K L H+K
Sbjct: 448 YKCDQCDYSAIQKHSLDRHKRNHAGDKPFMCEECGFGTARKSVLTLHMK 496
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++C C + T + H H G+K +KC C Y A QK L H+ +KH+ +
Sbjct: 256 YMCGECGHRTASKSYLSRHMRTHTGEKPYKCDQCDYSAVQKSSLDQHL-SKHTGET 310
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C + T + H IH G+K +KC C Y A K L H+ KH+
Sbjct: 476 FMCEECGFGTARKSVLTLHMKIHTGEKPYKCDQCDYSAAYKSALDRHLVVKHT 528
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T + H H G+K +KC C Y A QK L H+ +KH+
Sbjct: 200 YMCGECGHRTASKSRLSLHMRTHTGEKPYKCDQCDYSAAQKSSLDQHL-SKHT 251
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
++S P C C + T+S + L H +R + + C CDY +
Sbjct: 246 HLSKHTGEKPYMCGECGHRTASK-SYLSRH-------MRTHTGEKPYKCDQCDYSAVQKS 297
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+ +KC C Y A QK L H+
Sbjct: 298 SLDQHLSKHTGETPYKCDQCDYSAAQKYNLDQHL 331
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T + H H G+K +KC C Y A QK L H+
Sbjct: 56 YMCGECGHRTASKSRLSLHMRTHTGEKPYKCDQCDYSAAQKYNLDKHL 103
>gi|260786743|ref|XP_002588416.1| hypothetical protein BRAFLDRAFT_199282 [Branchiostoma floridae]
gi|229273578|gb|EEN44427.1| hypothetical protein BRAFLDRAFT_199282 [Branchiostoma floridae]
Length = 117
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + ++ H H G+K +KC C Y A QK +L HV +H+
Sbjct: 10 YMCGECGYRTAVRSHLSRHMKTHTGEKPYKCDRCDYSAVQKGQLDIHVMTRHT 62
>gi|260823074|ref|XP_002604008.1| hypothetical protein BRAFLDRAFT_71703 [Branchiostoma floridae]
gi|229289333|gb|EEN60019.1| hypothetical protein BRAFLDRAFT_71703 [Branchiostoma floridae]
Length = 1575
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C + S+ VN + +H+ PCM C C Y TI+ ++ H + H G+
Sbjct: 126 CDYSAALKSNLVNHIRKHTGEKPCM-----------CGECGYRTILKSDLSRHLVTHTGE 174
Query: 113 KQFKCCLCSYGAYQKEKLQFHV 134
K +KC C Y A +K L H+
Sbjct: 175 KPYKCDQCDYSAARKHNLDSHI 196
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
FIC C Y + N+ H + H GDK +KC C Y K L H++
Sbjct: 1112 FICGECGYRSARKSNVSTHMITHTGDKPYKCDQCGYRTAWKSHLSQHMR 1160
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y TI ++ H H G++ +KC C Y A QK L H+
Sbjct: 1056 YMCGECGYRTIYRSHLSRHMKTHTGERPYKCDQCDYSAAQKGDLDKHL 1103
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T ++ H IH G+K +KC C Y K L+ HV KHS
Sbjct: 1196 YMCEMCGYRTAKKSHLTEHVRIHTGEKPYKCHQCDYSTAHKANLEKHVA-KHS 1247
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
C+ +M P C C +++++ + L +H +R ++C C Y
Sbjct: 218 CKLSLHMKTHTGEKPYKCDQC-DYSAAQKSNLDKHLSKTHRHIRKHTGDKPYLCGECGYR 276
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
T N+ H H G++ +KC C Y A QK L H
Sbjct: 277 TAQRCNLSLHMKTHTGERPYKCDQCDYSAAQKSNLDQH 314
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H H G+K + C C Y A +K KL H++
Sbjct: 296 YKCDQCDYSAAQKSNLDQHQAKHTGEKPYMCGECGYRAARKSKLLVHMR 344
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC + +LL +R + ++C C + T + H H
Sbjct: 890 PYKCDHCDYSAHREWHLLQH--------LRTHTGEKPYMCGECGFRTSYKSCLSQHMRTH 941
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
G+K KC C Y A Q+ L H+ +KH T+++D
Sbjct: 942 TGEKPHKCDQCDYSAGQRGHLLRHIASKH-TEMED 975
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
N+++S + L++H N + ++C C + T + +H H G+K +KC
Sbjct: 796 NYSTSRASYLVQHLTN-------HHGEKAYMCGECGHRTAYKSGLSSHMKTHTGEKPYKC 848
Query: 118 CLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y A +K L H + KH+ + D
Sbjct: 849 DQCDYSAARKSTLNRH-QAKHTGEKPD 874
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T ++ H H G+K +KC C Y A QK HV
Sbjct: 1140 YKCDQCGYRTAWKSHLSQHMRTHTGEKPYKCDQCDYSAAQKSTFDQHV 1187
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
++C C Y N+ H IH DK +KC C Y QK L H K + S+
Sbjct: 1308 YMCGECGYRAAQRCNLSRHMKIHTADKPYKCDQCDYSVAQKSTLNKHNKMEDSS 1361
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H H G++ +KC C Y A QK L HV
Sbjct: 324 YMCGECGYRAARKSKLLVHMRTHTGERPYKCEQCGYSAAQKSNLDEHV 371
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C C Y T + H H G+K +KC C Y A QK L H+ H
Sbjct: 205 YTCGECGYRTAQRCKLSLHMKTHTGEKPYKCDQCDYSAAQKSNLDKHLSKTH 256
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +F++ D L +H E P K C C Y T
Sbjct: 1454 HMRTHTGEKPYKCDQC-DFSAIDKFKLKQHQEK---HAGDKPYK----CGECAYMTAYRS 1505
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H G+K +KC C Y A +K L H + +HS
Sbjct: 1506 HLSRHMRSHTGEKPYKCDQCDYSAAEKHHLIDH-QTRHS 1543
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C T+ NL + +HS P ++C C Y T ++ H
Sbjct: 1223 PYKCHQCDYSTAHKANLEKHVAKHSGEKP-----------YMCGECGYRTTHQCHLSRHM 1271
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G++ + C C Y A QK L H+
Sbjct: 1272 RTHTGERPYNCDQCDYSAAQKGDLDKHL 1299
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C+ C ++++ + L EH V + +IC C Y I
Sbjct: 342 HMRTHTGERPYKCEQC-GYSAAQKSNLDEH-------VAKHTGEKPYICGECGYRAIRKS 393
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+ H H G+K +KC C Y A QK L H
Sbjct: 394 KLVVHMRTHSGEKPYKCDQCEYSATQKCTLDRH 426
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y N+ H H G+K + C C Y A +K KL H++
Sbjct: 352 YKCEQCGYSAAQKSNLDEHVAKHTGEKPYICGECGYRAIRKSKLVVHMR 400
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y ++ H H G+K +KC C + A K KL+ H + KH+
Sbjct: 1436 FMCGECGYRASQKSHLSKHMRTHTGEKPYKCDQCDFSAIDKFKLKQH-QEKHA 1487
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ +H H G+K + C C Y A Q+ L H++
Sbjct: 1520 YKCDQCDYSAAEKHHLIDHQTRHSGEKPYMCGECGYRAAQRSTLSRHME 1568
>gi|391343773|ref|XP_003746180.1| PREDICTED: zinc finger Y-chromosomal protein 1-like [Metaseiulus
occidentalis]
Length = 478
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+C+ C Y +N+ H L H GDK F+C C + + + +KL+ H+K KH +
Sbjct: 138 LCLICQYSVKHRRNIYRHILTHTGDKPFRCTSCEFRSSRSDKLKHHIKTKHQNE 191
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 80 PDPVKYK--FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
P+ YK F C C Y T I + H L H G+K KC C + + +K+ L HV+ K
Sbjct: 263 PNSSLYKKFFSCHVCGYNTHIKRAHERHILTHTGEKPHKCDYCDFRSNRKDNLLTHVRKK 322
Query: 138 H 138
H
Sbjct: 323 H 323
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
C CD + +++ H + H G K + C C + ++E + HVKNKH
Sbjct: 36 CPLCDKIFPLKRDLERHMVKHTGLKPYPCPYCPFRTTRREHVSNHVKNKH 85
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
KYK C Y T + H L H G+K F+C C Y +K+ L H+ +H
Sbjct: 406 KYKCPYDHCAYITNRRFPLSRHLLTHTGEKPFRCLHCHYSCSRKDALSSHMARRH 460
>gi|260832602|ref|XP_002611246.1| hypothetical protein BRAFLDRAFT_148654 [Branchiostoma floridae]
gi|229296617|gb|EEN67256.1| hypothetical protein BRAFLDRAFT_148654 [Branchiostoma floridae]
Length = 236
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++ NL M R VK F+C C+Y T + + H H
Sbjct: 149 PYKCDQCDYASATKCNLDQH-------MARHTGVK-PFMCGECEYRTAVKLRLSQHLRTH 200
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K FKC C Y A QK L+ H+ KH+ +
Sbjct: 201 TGEKPFKCAQCDYSATQKGSLKQHM-AKHTGR 231
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+F+C C Y T ++ H H G+K +KC LC Y A QK L+ H+ KH+ +
Sbjct: 9 RFVCETCGYRTSDKSSLIVHIRRHTGEKPYKCDLCDYSATQKGSLKQHM-AKHTGR 63
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C T+ +L + +H+ N P +IC C Y T
Sbjct: 84 HMRRHTGEKPYKCDQCDYSTAEKSDLVRHMAKHTGNKP-----------YICGKCGYRTA 132
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ ++ H H G+K +KC C Y + K L H+
Sbjct: 133 VRSHLTGHMRKHTGEKPYKCDQCDYASATKCNLDQHM 169
>gi|260782878|ref|XP_002586507.1| hypothetical protein BRAFLDRAFT_249243 [Branchiostoma floridae]
gi|229271622|gb|EEN42518.1| hypothetical protein BRAFLDRAFT_249243 [Branchiostoma floridae]
Length = 480
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M + P C HC T+ NL L H+EN P ++C C Y T
Sbjct: 192 HMRTHTAEKPYKCDHCDFSTAHKSNLNRHLAIHTEN----TNEKP----YMCRECGYRTA 243
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ +H IH G+K +KC C+Y A +K L +H+
Sbjct: 244 KKSHLSDHMRIHTGEKPYKCDQCNYSAGRKSHLYYHL 280
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVAC-DYFTIIS 99
+M P C HC +++++ + L +H + + +IC C Y T
Sbjct: 363 HMRTHTGEKPYKCDHC-DYSAAQTSTLKQH-------LAMHTGERPYICGECCGYRTAKK 414
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ +H IH G+K +KC C+Y A +K L +H+
Sbjct: 415 SHLSDHMRIHTGEKPYKCDQCNYSAGRKSHLYYHL 449
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY + N+ H +H G+K + C C Y A QK L H++
Sbjct: 90 FKCDQCDYSSAHKSNLNQHLAMHTGNKPYMCGECGYRATQKCHLSKHMR 138
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H G+K FKC C Y A +K L+ H+
Sbjct: 6 YMCGECGYTAACQSHVSQHMRTHTGEKPFKCDQCDYSAARKYSLKQHL 53
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A Q L+ H+
Sbjct: 345 YMCGECGYRTAQKSHLFRHMRTHTGEKPYKCDHCDYSAAQTSTLKQHL 392
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY + N+ H +H G K + C C Y QK L H++
Sbjct: 146 FKCDQCDYSSAHKSNLNQHLAMHTGYKPYMCGECGYRTTQKSHLVEHMR 194
>gi|390333288|ref|XP_003723678.1| PREDICTED: DNA-binding protein Ikaros-like [Strongylocentrotus
purpuratus]
Length = 549
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM-VRPDPVKYKFICVACDYFTIIS 99
++S L + Q +SS + ++ H E+ + +K KF C C
Sbjct: 91 DLSSLGPITDQDQDPDSGTSSSVLYNVLSHGESAAMQHIAMGGIKKKFDCRWCKASFTKK 150
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++R H +H G + F+C C Y A +K++L+ H+K +H+
Sbjct: 151 TSLRRHMNLHSGSRPFQCPFCEYNATRKDQLKTHIKTRHT 190
>gi|291223509|ref|XP_002731752.1| PREDICTED: enhancer binding protein-like [Saccoglossus kowalevskii]
Length = 852
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C CDY ++ S ++ H H G+K FKC LC+Y + KL+ H++
Sbjct: 475 CPLCDYISVESSKIKRHMRSHTGEKPFKCQLCAYASTDNYKLKRHMR 521
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S + + + H +R + F C C Y + + ++ H +H
Sbjct: 472 PHKCPLC-DYISVESSKIKRH-------MRSHTGEKPFKCQLCAYASTDNYKLKRHMRVH 523
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K FKC C QK L+ H+ KHS +
Sbjct: 524 TGEKPFKCPDCDMAFSQKSSLKEHMW-KHSGR 554
>gi|260832642|ref|XP_002611266.1| hypothetical protein BRAFLDRAFT_73339 [Branchiostoma floridae]
gi|229296637|gb|EEN67276.1| hypothetical protein BRAFLDRAFT_73339 [Branchiostoma floridae]
Length = 632
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
V +F C CDY + HT IH G+K +KC C Y A QK L H KHS
Sbjct: 105 VDRRFECTECDYTAAKKYCLVIHTRIHTGEKPYKCGQCDYCARQKSSLDLHRTTKHS 161
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
Query: 53 CKHCKNFTSS-DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
C +C SS D++ +HS P M C C+Y T N+ H +H G
Sbjct: 142 CDYCARQKSSLDLHRTTKHSGEKPLM-----------CDECEYRTADRSNLSVHMRLHTG 190
Query: 112 DKQFKCCLCSYGAYQKEKLQFHV 134
DK FKC C Y +K L H+
Sbjct: 191 DKPFKCGQCDYSTARKGNLDRHM 213
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F+CV C Y T ++ H H G+K +KC C Y A K +L H+
Sbjct: 411 RFMCVECGYRTAHKSHLTAHMRSHTGEKPYKCDQCDYSATHKSQLDRHM 459
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C T+ NL + +H+ P ++C C+Y T
Sbjct: 184 HMRLHTGDKPFKCGQCDYSTARKGNLDRHMAKHTGEKP-----------YMCGDCEYKTA 232
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H G+K +KC C Y A +K+ L H+ KHS
Sbjct: 233 DRSSLAVHLRKHTGEKPYKCDQCDYSAAKKDNLDRHM-AKHS 273
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 70 HSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEK 129
H+E + V +F C CDY + T + G+K KC +C Y A +K+
Sbjct: 339 HTEQAGFLALKRTVDRRFECTECDYRPAKKVKLSRRTRKYTGEKPNKCDICDYSAAKKDH 398
Query: 130 LQFHV 134
L+ H+
Sbjct: 399 LESHM 403
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T ++ H H G K +KC LC Y Q+ L H+
Sbjct: 468 FLCGECGYRTADRSSLTVHMRTHTGVKPYKCDLCDYSTAQRGNLDRHM 515
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY T N+ H H G+K++ C C Y + + L+ H+
Sbjct: 496 YKCDLCDYSTAQRGNLDRHMAKHTGEKRYICGECGYRSADRSALKSHM 543
>gi|351710610|gb|EHB13529.1| RE1-silencing transcription factor [Heterocephalus glaber]
Length = 585
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C CDY T N + H + + +QF C +C Y A +K LQ+H K+KH T
Sbjct: 341 CPHCDYKTADRSNFKKHVELRVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 392
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 87 FICVACDYFTIISQNMRN---HTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C+YF+ S N H H G+ +KC LC Y + QK L H+
Sbjct: 251 YTCGKCNYFSDFSDRKNNYFQHVRTHTGECPYKCELCPYSSSQKTHLTRHM 301
>gi|260832592|ref|XP_002611241.1| hypothetical protein BRAFLDRAFT_207497 [Branchiostoma floridae]
gi|229296612|gb|EEN67251.1| hypothetical protein BRAFLDRAFT_207497 [Branchiostoma floridae]
Length = 224
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C Y N+ HT H G+K FKC C Y A QK L H+ NKH+
Sbjct: 2 RFACTECGYRGAKKDNLIRHTRTHTGEKPFKCDQCDYTAAQKSTLDLHL-NKHT 54
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
FIC C Y T I ++ H H G+K +KC C + A +K L H+ KH+++
Sbjct: 171 FICGKCGYKTNILSSLTRHMRTHTGEKPYKCDQCDFSATRKRDLNNHLA-KHTSQ 224
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T ++ H H G+K +KC C Y A +K L H+
Sbjct: 59 FLCGQCGYRTARRSHLSEHMRRHSGEKPYKCDQCDYSASRKGYLDKHM 106
>gi|443714552|gb|ELU06916.1| hypothetical protein CAPTEDRAFT_147046 [Capitella teleta]
Length = 360
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P SC C+ T L + +R + F C C+Y ++R H + H
Sbjct: 136 PFSCTFCEYTTGRKAALDLH--------LRTHTGEKPFKCDMCNYRASDHNSLRRHRMRH 187
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
GD+ ++C LC Y Q L+ H+KNKH
Sbjct: 188 TGDRSYRCQLCPYTCIQSISLKMHMKNKH 216
>gi|260788473|ref|XP_002589274.1| hypothetical protein BRAFLDRAFT_270548 [Branchiostoma floridae]
gi|229274450|gb|EEN45285.1| hypothetical protein BRAFLDRAFT_270548 [Branchiostoma floridae]
Length = 236
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRP-------------DPVKYKFI 88
MS V P C HC+ F++ D + L++H C +P +KY +
Sbjct: 34 MSKHTDVRPFRCGHCE-FSTVDKSKLVKHIRICHGGEKPYHCDMCEFSTAEKRRLKYHLV 92
Query: 89 ----------CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C CDY + + ++ H H GDKQ +C +C+Y +Y L+ H+
Sbjct: 93 SKHSKYRPYKCELCDYSGVSKEKLKRHMTNHTGDKQHRCHICAYSSYDSGNLKRHI 148
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI- 108
P C+ C +++++ + L +H + VRP F C C++ T+ + H I
Sbjct: 13 PYHCQLC-DYSATQSDNLKKHVMSKHTDVRP------FRCGHCEFSTVDKSKLVKHIRIC 65
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G+K + C +C + +K +L++H+ +KHS
Sbjct: 66 HGGEKPYHCDMCEFSTAEKRRLKYHLVSKHS 96
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
F C C + +I +++ H +H G+K+F C C Y A L HV+ KH
Sbjct: 157 FKCGICPFSSIRMSDLQRHMALHTGEKRFLCVQCDYSAISSYTLARHVRAKH 208
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C C Y + S N++ H H G++ FKC +C + + + LQ H+
Sbjct: 131 CHICAYSSYDSGNLKRHIATHTGERPFKCGICPFSSIRMSDLQRHM 176
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 86 KFICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F+CV CDY I S + H H K F+C LC Y A Q L+ H+
Sbjct: 184 RFLCVQCDYSAISSYTLARHVRAKHDKLKPFQCSLCEYAASQLYTLKDHM 233
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 102 MRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
M+ H H G++ + C LC Y A Q + L+ HV +KH+
Sbjct: 1 MKRHLRTHTGERPYHCQLCDYSATQSDNLKKHVMSKHT 38
>gi|260832616|ref|XP_002611253.1| hypothetical protein BRAFLDRAFT_71208 [Branchiostoma floridae]
gi|229296624|gb|EEN67263.1| hypothetical protein BRAFLDRAFT_71208 [Branchiostoma floridae]
Length = 296
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
V +F C CDY + HT IH G+K +KC C Y A QK L H KHS
Sbjct: 71 VDRRFECTECDYRAAKKYCLVIHTRIHTGEKPYKCGQCDYCARQKSSLDLHRTTKHS 127
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
Query: 53 CKHCKNFTSS-DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
C +C SS D++ +HS P M C C+Y T N+ H +H G
Sbjct: 108 CDYCARQKSSLDLHRTTKHSGEKPLM-----------CDECEYRTADRSNLSVHMRLHTG 156
Query: 112 DKQFKCCLCSYGAYQKEKLQFHV 134
DK FKC C Y +K L H+
Sbjct: 157 DKPFKCDQCDYSTARKGNLDRHM 179
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY T N+ H H G+K + C C Y + L H++
Sbjct: 160 FKCDQCDYSTARKGNLDRHMAKHTGEKPYNCGDCGYKTADRSSLAVHLR 208
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C T+ NL + +H+ P + C C Y T
Sbjct: 150 HMRLHTGDKPFKCDQCDYSTARKGNLDRHMAKHTGEKP-----------YNCGDCGYKTA 198
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC C Y A +K+ L H+
Sbjct: 199 DRSSLAVHLRKHTGEKPYKCDQCDYSAAKKDNLDRHM 235
>gi|260841554|ref|XP_002613977.1| hypothetical protein BRAFLDRAFT_118465 [Branchiostoma floridae]
gi|229299367|gb|EEN69986.1| hypothetical protein BRAFLDRAFT_118465 [Branchiostoma floridae]
Length = 1413
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+HC T+S+ L + M P K +++C C Y T H+ H G
Sbjct: 46 CEHCDYSTNSEQYLEVHQ------MKHTGPGK-RYLCGECGYSTGSKSQFTTHSRTHAGG 98
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
K FKC C + A QK +L H K HS K
Sbjct: 99 KSFKCDKCDFSASQKVQLDRHQKRHHSKASK 129
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Query: 39 CPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTII 98
CP F PQ +H +M HS+ + VK F+C C +
Sbjct: 788 CPECDFTAKYKPQLARH-----------MMSHSDKLGNIDHLLGVKV-FLCEECGFCAFN 835
Query: 99 SQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
S + + H H G++ FKC LC + QK L+ H+
Sbjct: 836 STSFKRHVRSHTGERPFKCELCDFATAQKSHLKRHM 871
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C + N+ S LM H+ P + C C+Y +++ +M H H+GD
Sbjct: 1027 CDYATNYKKSLTLHLMTHTGEKP-----------YACDMCEYRSLLKCSMVEHKRRHVGD 1075
Query: 113 KQFKCCLCSYGAYQKEKLQFHVK 135
K F C LC Y + +K L H+K
Sbjct: 1076 KPFACDLCPYKSVKKSALTRHMK 1098
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
VK F C C Y + H IH G+K FKC C++ K+ L+ H+ +KH+
Sbjct: 309 VKKPFACRTCKYRAYSRSTLEEHERIHTGEKPFKCDRCNFSTAHKKCLRTHM-SKHT 364
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 52 SCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
SC HCK T V L + HS+ P F C C++ T Q+ + H +
Sbjct: 731 SCSHCKYKTKQKVQLERHMRHHSKEKP-----------FKCDQCNFTTAYEQSFKQHLVT 779
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
H +K F C C + A K +L H+ + HS K+ +
Sbjct: 780 HGDEKPFACPECDFTAKYKPQLARHMMS-HSDKLGN 814
>gi|260814077|ref|XP_002601742.1| hypothetical protein BRAFLDRAFT_76038 [Branchiostoma floridae]
gi|229287044|gb|EEN57754.1| hypothetical protein BRAFLDRAFT_76038 [Branchiostoma floridae]
Length = 535
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
C CDY + Q + H +H K FKC +CSY + QK+ L+ H+ KH
Sbjct: 254 CTQCDYSAMTKQRLNRHMALHTNKKPFKCEICSYSSIQKQDLERHLAIKH 303
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 FICVACDYFTIISQNMRNHTL-IHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY S +++H + IH G++ KC C Y A QK L HV+ +H+T+
Sbjct: 10 FKCQQCDYSATQSHYLKDHVMAIHKGERPHKCQHCDYSATQKCALNRHVRARHTTE 65
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY T I + H H GDK +KC +C Y A + L+ H+
Sbjct: 450 YKCELCDYSTAIRTGLTQHMATHTGDKPYKCDICGYSAARMSALKKHM 497
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPD-PVKYKFICVACDYFTIISQ 100
M+ P C+HC +++++ L H VR + F C CDY +
Sbjct: 30 MAIHKGERPHKCQHC-DYSATQKCALNRH-------VRARHTTERSFKCQHCDYSAKTMR 81
Query: 101 NMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H + H G+K KC C Y QK L+ HVK +H+
Sbjct: 82 VLKVHVMARHTGEKPHKCQQCDYSTTQKTALRMHVKARHT 121
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQN 101
M+ P C C ++++ N L H + RP C CDY + +
Sbjct: 148 MAKHTGEAPHQCPQC-DYSAPRRNTLRMHIKAKHTGERP------HKCPRCDYAALKADT 200
Query: 102 MRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+++H + H G+K C C Y A QK L H++
Sbjct: 201 LKDHIMAKHTGEKPHHCNYCDYSATQKSSLNSHIRG 236
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY + ++ H +IH G+K F+C +C + K L+ H+
Sbjct: 366 YKCDVCDYSATLKSILKQHMIIHSGEKPFQCDVCKFSTASKSSLKTHL 413
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQN 101
M+ P C+ C T+ L M H + R P K C CDY
Sbjct: 88 MARHTGEKPHKCQQCDYSTTQKTALRM-HVKARHTGDREKPYK----CQHCDYSAAQRGA 142
Query: 102 MRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H + H G+ +C C Y A ++ L+ H+K KH+
Sbjct: 143 LKVHVMAKHTGEAPHQCPQCDYSAPRRNTLRMHIKAKHT 181
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYG----AYQKEKLQFHVKNK 137
F C C + T +++ H IH G+K++KC +C Y +Y K+ + H K
Sbjct: 394 FQCDVCKFSTASKSSLKTHLTIHTGEKKYKCDICGYATANLSYFKQHVAMHTGEK 448
>gi|260823132|ref|XP_002604037.1| hypothetical protein BRAFLDRAFT_57763 [Branchiostoma floridae]
gi|229289362|gb|EEN60048.1| hypothetical protein BRAFLDRAFT_57763 [Branchiostoma floridae]
Length = 483
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C + S+ VN + +H+ PCM C C Y TI+ ++ H + H G+
Sbjct: 82 CDYSAALKSNLVNHIRKHTGEKPCM-----------CGECGYRTILKSDLSRHLVTHTGE 130
Query: 113 KQFKCCLCSYGAYQKEKLQFHV 134
K +KC C Y A +K L H+
Sbjct: 131 KPYKCDQCDYSAARKHNLDSHI 152
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 14/103 (13%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVAC 92
C+ +M P C C + NL L +H+ P ++C C
Sbjct: 174 CKLSLHMKIHTGEKPYKCDQCDYSAAYKSNLDKHLRKHTGEKP-----------YMCGDC 222
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
Y ++ ++ H H G+K +KC C Y A K L H++
Sbjct: 223 GYRAVLKSDLSRHLRSHTGEKPYKCDQCDYSAAHKSNLDSHLR 265
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H H G+K + C C Y A +K KL H++
Sbjct: 301 YKCDQCDYSAAQKSNLDQHQAKHTGEKPYMCGECGYRAARKSKLLVHMR 349
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 70 HSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEK 129
H N +R + ++C C Y N+ H H G++ +KC C Y A QK
Sbjct: 256 HKSNLDSHLRKHTGEKPYLCGECGYRAARKANLFLHMKTHTGERPYKCDQCDYSAAQKSN 315
Query: 130 LQFH 133
L H
Sbjct: 316 LDQH 319
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H H G++ +KC C Y A QK L HV
Sbjct: 329 YMCGECGYRAARKSKLLVHMRTHTGERPYKCEQCGYSAAQKSNLDEHV 376
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C+ C ++++ + L EH V + +IC C Y I
Sbjct: 347 HMRTHTGERPYKCEQC-GYSAAQKSNLDEH-------VAKHTGEKPYICGECGYRAIRKS 398
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+ H H G+K +KC C Y A QK L H
Sbjct: 399 KLVIHMRTHSGEKPYKCDQCEYSATQKCTLDRH 431
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C Y N+ H H G+K + C C Y A +K KL H++ K
Sbjct: 357 YKCEQCGYSAAQKSNLDEHVAKHTGEKPYICGECGYRAIRKSKLVIHMRTHSGEK 411
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y T + H IH G+K +KC C Y A K L H++
Sbjct: 161 FTCGECGYRTAQRCKLSLHMKIHTGEKPYKCDQCDYSAAYKSNLDKHLR 209
>gi|261289257|ref|XP_002603071.1| hypothetical protein BRAFLDRAFT_147487 [Branchiostoma floridae]
gi|229288388|gb|EEN59083.1| hypothetical protein BRAFLDRAFT_147487 [Branchiostoma floridae]
Length = 243
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D +++ +H+ P ++C C Y T + M H H+ +K +KC C Y
Sbjct: 31 DTHIMAKHTGEKP-----------YMCGECGYRTAVRSRMFKHMTTHITEKPYKCEQCDY 79
Query: 123 GAYQKEKLQFHVKNKHSTKV 142
A K+ L+ H+K KH KV
Sbjct: 80 SASHKDNLRQHLKIKHGEKV 99
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++ ++++H ++ + +IC CD+ T ++ H H
Sbjct: 127 PYKCDQC-DYSAAQSGMVIKH-------LKKHTGEKPYICEECDFRTGTKWSLVRHRTKH 178
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G K +KC C + A KE L HV H+
Sbjct: 179 TGIKAYKCDQCDFTAGIKESLNRHVITNHT 208
>gi|260806398|ref|XP_002598071.1| hypothetical protein BRAFLDRAFT_85713 [Branchiostoma floridae]
gi|229283342|gb|EEN54083.1| hypothetical protein BRAFLDRAFT_85713 [Branchiostoma floridae]
Length = 590
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T ++ H H G+K FKC C Y A QK L+ H + KH++K
Sbjct: 350 YMCGKCGYRTTQKSDLSLHMRTHTGEKPFKCDQCDYSAAQKSNLKVHKEAKHASK 404
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+IC CDY T I ++ H H G+K F C C YG K L H++
Sbjct: 56 YICGECDYRTAIKTHLSRHMKTHKGEKSFMCAECGYGTATKSDLVVHIRT 105
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y T ++ H H G++ +KC C Y A +K L H + +HS
Sbjct: 84 FMCAECGYGTATKSDLVVHIRTHTGERPYKCDQCDYSAARKSTLNEHQRARHS 136
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L H E +P ++C C Y +
Sbjct: 368 HMRTHTGEKPFKCDQC-DYSAAQKSNLKVHKEAKHASKKP------YMCGECGYRAVTKS 420
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H IH G++ +KC C Y A +K L H K KHS
Sbjct: 421 QLSKHMRIHTGERPYKCDQCDYSASRKSTLDDH-KAKHS 458
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
++C C Y ++ H H G+K +KC C Y A +K L H+ KHST
Sbjct: 491 YMCGECGYRAAQKAHLSGHMKTHTGEKPYKCDQCDYSAARKCNLDKHIAAKHST 544
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQ 131
++C C Y T ++ H H G+K +KC C Y A QK LQ
Sbjct: 233 YMCGECGYRTAQKSDLSQHMRTHTGEKPYKCDQCDYSAAQKVNLQ 277
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
Query: 37 QTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFT 96
Q +M P C C ++++S + L +H + ++C C Y T
Sbjct: 421 QLSKHMRIHTGERPYKCDQC-DYSASRKSTLDDHKAK-------HSGEKPYMCGECGYRT 472
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ +H H G+K + C C Y A QK L H+K
Sbjct: 473 AQRSTLCDHMRTHTGEKPYMCGECGYRAAQKAHLSGHMKT 512
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++ + L EH +P +IC C Y T ++ H H
Sbjct: 111 PYKCDQC-DYSAARKSTLNEHQRARHSGEKP------YICEECGYRTARKTHLSEHMRTH 163
Query: 110 LGDKQFKCCLCSYGAYQK----EKLQFHVKNKHSTKVK 143
G+K + C C Y K ++ H KH T K
Sbjct: 164 TGEKPYMCGECGYRTAWKLDLTRHMRTHTGEKHHTGYK 201
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + H H GDK + C C Y QK L H++
Sbjct: 322 YKCDQCDYSAAWRTALVRHKAKHTGDKPYMCGKCGYRTTQKSDLSLHMRT 371
>gi|260782972|ref|XP_002586553.1| hypothetical protein BRAFLDRAFT_249147 [Branchiostoma floridae]
gi|229271670|gb|EEN42564.1| hypothetical protein BRAFLDRAFT_249147 [Branchiostoma floridae]
Length = 225
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C C YFT N++ H +H ++ FKC LC Y +KE +Q H+K
Sbjct: 86 YYCPLCSYFTRHRGNIKQHVRVHTRERPFKCPLCEYTGARKEHVQVHMKR 135
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C HC TS +L L HS + P + C C Y
Sbjct: 132 HMKRHTGERPFKCDHCDYRTSRKPDLVKHLRTHSGDRP-----------YACPKCAYRAA 180
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ + NH H G+K +KC C Y +K L H++
Sbjct: 181 VQSALVNHLRTHTGEKPYKCPFCDYCTARKRDLSKHMER 219
>gi|34193189|gb|AAH41331.2| ZNF335 protein, partial [Homo sapiens]
Length = 1121
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L+ HV KH+
Sbjct: 399 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLRSHVAVKHT 452
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 388 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 432
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T +R+H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 433 CPYRTFREDFLRSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 486
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 856 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 906
>gi|242000936|ref|XP_002435111.1| zinc finger protein, putative [Ixodes scapularis]
gi|215498441|gb|EEC07935.1| zinc finger protein, putative [Ixodes scapularis]
Length = 658
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C+ CD N+R H IHLG +++C CSY +Y + + HV+ H+
Sbjct: 547 RLTCLRCDRLFSTFSNLRRHAAIHLGYSRYQCTRCSYQSYNRSDCRSHVQRVHA 600
>gi|260832614|ref|XP_002611252.1| hypothetical protein BRAFLDRAFT_119658 [Branchiostoma floridae]
gi|229296623|gb|EEN67262.1| hypothetical protein BRAFLDRAFT_119658 [Branchiostoma floridae]
Length = 2406
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%)
Query: 62 SDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCS 121
SD + +H+E + V F C C Y+ ++ HT H G+K FKC C
Sbjct: 957 SDHHPTQDHTEQWDTLAVKRTVVKCFACTECGYWAAAKADLIKHTRKHTGEKPFKCDQCD 1016
Query: 122 YGAYQKEKLQFHV 134
Y A QK L+ H+
Sbjct: 1017 YAAAQKRHLKRHM 1029
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M V P C C FT+ NL + +H+ P ++C C Y T
Sbjct: 1791 HMRTHTGVKPYKCDQCDYFTTRKSNLDRHMAKHTGEKP-----------YMCGECGYRTA 1839
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K +KC C Y A K L H+
Sbjct: 1840 GHTTLTRHMRTHTGEKPYKCDQCEYSAAMKGNLDQHM 1876
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 32/84 (38%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+ SD +E + V +F C CDY N+ H H G+
Sbjct: 1456 CEEKSGGIESDHPPAQGRTEQTDRLAAKRTVDSRFACTECDYRAASDANLLIHARKHTGE 1515
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKN 136
+ +KC C Y A QK L H N
Sbjct: 1516 QPYKCDQCDYSATQKGNLDQHRTN 1539
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
V + C CDY + HT H G+K +KC +C Y A +K+ + H+ +KH+++
Sbjct: 64 VDRRLECTECDYRPAKKVKLSRHTRKHTGEKPYKCDICDYSAAKKDHFESHM-DKHTSEK 122
Query: 143 K 143
+
Sbjct: 123 R 123
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T ++ H H G+K +KC C+Y A +K L H+
Sbjct: 1939 FMCGECGYRTARKSDLSRHMRTHTGEKPYKCDQCAYSAARKGHLDRHI 1986
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY N+ H H G+K +KC C Y A QK L H+
Sbjct: 2104 YKCDQCDYSATQKGNLDQHMAKHTGEKNYKCDECDYAATQKGNLDRHM 2151
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M V P C C ++++++ + L H M R K ++C C + T
Sbjct: 1136 HMKRHTGVKPYKCDQC-DYSATEKSSLDRH------MTRHTGEK-PYMCGECGFRTAHRC 1187
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G+K +KC C Y A K L HV
Sbjct: 1188 NLTVHMRTHTGEKSYKCDQCDYSATHKHSLDLHV 1221
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
V +F C C Y ++ H H GDK +KC C Y A QK L H+
Sbjct: 1713 VDSRFECTECGYRAAFRSHLLIHARKHAGDKPYKCDQCDYSATQKGNLDRHM 1764
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C NF+++ L +H M + K ++C C Y T N+ H + H
Sbjct: 1257 PYKCDQC-NFSAAKEGNLDQH------MTKHTGEK-PYMCGECGYRTARKPNLSRHMVKH 1308
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
GDK F C C Y K L H++
Sbjct: 1309 TGDKPFVCGECGYKTAHKSNLTKHIRR 1335
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + N+ H H G K +KC LC++ A QK L H+
Sbjct: 351 YMCGECGYRTAVRSNLSVHMRKHTGVKPYKCDLCNFSAAQKGNLDQHM 398
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + N+ H H G K +KC LC++ A QK L H+
Sbjct: 743 YMCGECGYRTAVRSNLSVHMRKHTGVKPYKCDLCNFSAAQKGNLDQHM 790
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
V +F+C C Y ++ H H G+K +KC C Y A QK L H+
Sbjct: 2072 VDSRFVCTECGYRAASRSHLLVHARKHTGEKPYKCDQCDYSATQKGNLDQHM 2123
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 8/101 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M V P C C NF+++ L +H M + K ++C C Y
Sbjct: 761 HMRKHTGVKPYKCDLC-NFSAAQKGNLDQH------MAKHTGEK-PYMCGECGYRAAHKP 812
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
N+ H + H G K F C C Y K L+ H++ K
Sbjct: 813 NLSRHMVKHTGQKPFMCGECGYKTAHKSNLKMHIRRHRGVK 853
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 11/97 (11%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M V P C C + NL + +H+ P + KF+C C Y T
Sbjct: 254 HMKTHTGVKPYKCDQCDYAAAQKSNLDRHMTKHTGEKPFI--------KFMCGECGYRTA 305
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G K +KC LC Y QK L H+
Sbjct: 306 EKSALTVHMRTHTGVKPYKCDLCDYSTTQKCHLDEHM 342
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 11/97 (11%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M V P C C + NL + +H+ P + KF+C C Y T
Sbjct: 646 HMKTHTGVKPYKCDQCDYAAAQKSNLDRHMTKHTGEKPFI--------KFMCGECGYRTA 697
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G K +KC LC Y QK L H+
Sbjct: 698 EKSALTVHMRTHTGVKPYKCDLCDYSTTQKCHLDEHM 734
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
+C C Y T + + H H G+K F+C C Y A QK L H+ +H+ KD
Sbjct: 1038 LMCGECGYRTTDASYLTTHMRKHTGEKPFRCDQCDYSAAQKSNLDQHM-VRHTGLTKD 1094
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 24/55 (43%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T I N+ H H G K KC C Y QK L H+ + K
Sbjct: 1883 YMCGECGYRTAIRSNLSVHMRTHTGQKFNKCDQCDYSTAQKSHLDDHIARHNGEK 1937
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C+Y T+ ++ H H G K +KC C Y A K L H+
Sbjct: 2160 FMCGECEYRTVDKSSLTRHMTTHTGVKPYKCDHCGYSAALKGNLDRHM 2207
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M+ P C C T+ NL +++H+ + P F+C C Y T
Sbjct: 1276 HMTKHTGEKPYMCGECGYRTARKPNLSRHMVKHTGDKP-----------FVCGECGYKTA 1324
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G + +KC C + A QK L H+
Sbjct: 1325 HKSNLTKHIRRHKGVQPYKCHQCDFSAAQKGDLDQHM 1361
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ P C C + ++D + L H V+P + C CDYFT
Sbjct: 1763 HMAKHTGEKPYMCGEC-GYRTADRSALTVHMRT-HTGVKP------YKCDQCDYFTTRKS 1814
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+ H H G+K + C C Y L H++
Sbjct: 1815 NLDRHMAKHTGEKPYMCGECGYRTAGHTTLTRHMR 1849
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F+CV C Y T ++ H H G+K KC C Y K L H+
Sbjct: 123 RFMCVECGYRTAHKSHLSVHMRTHTGEKPTKCDQCDYSTAHKSHLDRHM 171
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T N++ H H G K +KC C Y A K L H+
Sbjct: 827 FMCGECGYKTAHKSNLKMHIRRHRGVKPYKCHQCDYSAATKGALDQHM 874
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY +N+ H H+G+K +KC C Y A +K L H+
Sbjct: 2244 YKCDHCDYSAARKRNLDRHISKHVGEKPYKCDQCDYSAARKVYLYQHM 2291
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 14/92 (15%)
Query: 46 NSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNM 102
+ V P C C T+ +L + +H+ P ++C C + T +
Sbjct: 2321 SGVKPYKCGQCDYSTARKGHLDIHMTKHTGEKP-----------YVCGECGHRTARKSAL 2369
Query: 103 RNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H H GDK +KC C Y + K L+ H+
Sbjct: 2370 SRHMRTHTGDKPYKCDQCDYSSNDKRCLKKHI 2401
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K+F+++ L H M D K F C C++ T ++ H H G K +K
Sbjct: 1095 KHFSTAQKGTLDRH------MTEHDGEK-PFKCGECEFRTAFKSSLVTHMKRHTGVKPYK 1147
Query: 117 CCLCSYGAYQKEKLQFHV 134
C C Y A +K L H+
Sbjct: 1148 CDQCDYSATEKSSLDRHM 1165
>gi|390338003|ref|XP_003724698.1| PREDICTED: zinc finger protein 226-like [Strongylocentrotus
purpuratus]
Length = 631
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY T N+ H +H G K +KC LC Y + QK L H++
Sbjct: 243 FSCNQCDYVTKRKHNLIQHLAVHTGAKPYKCDLCDYSSSQKGHLNVHIR 291
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Query: 89 CVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
CV C Y++ ++ +HTLIH G+K F+C +C Y A Q+ + H++
Sbjct: 135 CVFCSPYYSAVA----SHTLIHTGEKPFRCKICGYRARQRGHVVVHMQ 178
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C C + + + +++R H +H G + KC CS+ + Q ++ H+
Sbjct: 299 FKCPKCPFASTVPKSLREHLQMHYGQRPLKCPYCSFSSSQAFSIKRHI 346
>gi|260831888|ref|XP_002610890.1| hypothetical protein BRAFLDRAFT_126279 [Branchiostoma floridae]
gi|229296259|gb|EEN66900.1| hypothetical protein BRAFLDRAFT_126279 [Branchiostoma floridae]
Length = 1722
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK T+ +L + + R + +C C Y T+ N+ H H
Sbjct: 928 PHKCDKCKYATAHKTHLAIH-------VARYHTGEKPHMCEYCGYRTVDRSNLATHKKTH 980
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G++ FKC LC Y + K+KLQ H+ +KH+ +
Sbjct: 981 TGERPFKCDLCDYSSVAKKKLQQHM-SKHTAQ 1011
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
KY F C C Y + M H+ IH G+K FKC C + Q L+ H K +HS
Sbjct: 748 KYPFECKVCGYKAARQKEMVQHSRIHTGEKPFKCDQCDFSTAQSSTLKVH-KMRHS 802
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
KY F+C C Y M H+ IH G+K FKC C + Q+ L+ H K +HS
Sbjct: 837 KYPFVCKVCGYKVGKRNAMVIHSRIHTGEKPFKCDQCDFSTTQRNSLKEH-KMRHS 891
>gi|260789649|ref|XP_002589858.1| hypothetical protein BRAFLDRAFT_239127 [Branchiostoma floridae]
gi|229275042|gb|EEN45869.1| hypothetical protein BRAFLDRAFT_239127 [Branchiostoma floridae]
Length = 414
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
P PV F C C Y T + + H LIH G+ +KC C YG +K L H+
Sbjct: 149 PTPVDKSFKCTECSYSTGRKRELARHKLIHTGNIPYKCDQCDYGTLRKSDLDAHM 203
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C C Y T+ ++ H ++H+ K F C C Y +K +L H+K KH+
Sbjct: 38 FKCDECSYSTVRKSDLEKHGIVHMQTKPFACEQCEYSTLKKGELVKHIKEKHT 90
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
F C CDY T ++ +H H GD FKC CSYG +K L H
Sbjct: 95 FTCDQCDYSTRRESHLVSHKTRHTGDAPFKCDDCSYGTLRKANLARH 141
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C ++TS L H VR K F C C+Y + ++ H ++H
Sbjct: 268 PFKCEEC-SYTSYRKQDLDRHK------VRHATGKVSFKCAECNYVALKKSDLDKHMVMH 320
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFH 133
GD +KC C+Y + +K ++ H
Sbjct: 321 TGDLPYKCDQCNYSSMKKSEITRH 344
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
F C C Y T ++ H + H GD FKC CSY +K L+ H
Sbjct: 10 FKCGECSYSTFRKGDLARHEVKHTGDLPFKCDECSYSTVRKSDLEKH 56
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 49 IPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
IP C C T +L MVR + F C CDY T + + H
Sbjct: 182 IPYKCDQCDYGTLRKSDLDAH-------MVRHTGI-MPFKCNECDYGTGRRIDFKRHLRT 233
Query: 109 HLGDKQFKCCLCSYGAYQK 127
H G+K FKC +C + A K
Sbjct: 234 HTGEKPFKCGMCDFRAAMK 252
>gi|219911521|emb|CAX11686.1| zinc finger protein [Nilaparvata lugens]
Length = 471
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+IC +CD+ T+ ++ HT H G++ F+C +C +K+KLQ H++
Sbjct: 180 YICSSCDFVTLYPNDLTRHTRKHTGERPFECSICQRKFARKDKLQTHLR 228
>gi|260819951|ref|XP_002605299.1| hypothetical protein BRAFLDRAFT_89065 [Branchiostoma floridae]
gi|229290631|gb|EEN61309.1| hypothetical protein BRAFLDRAFT_89065 [Branchiostoma floridae]
Length = 463
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C Y T N++ H + H G+K +KC +C Y A Q+ L+ H+K KHS
Sbjct: 210 YKCDICGYGTADMSNLKRHIMGQHAGEKPYKCDICGYSAAQRSNLKLHIKAKHS 263
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P SC+ C ++++ + L +H + V+ + C AC Y + N++ H H
Sbjct: 153 PYSCEIC-DYSAKTKDHLRQH-------MTTHAVEKPYKCDACSYSSAQLSNLKRHMAKH 204
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC +C YG L+ H+ +H+
Sbjct: 205 TGEKPYKCDICGYGTADMSNLKRHIMGQHA 234
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
K C C+Y T + +++H H G++ ++C C Y A QK +L+ H+
Sbjct: 9 KHFCPHCEYRTGNAARLKDHIRTHTGERPYQCQHCDYSASQKSRLKMHI 57
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 46 NSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
+S P +C+ C + +S ++ L EH + V+ + C Y T+ + + H
Sbjct: 341 SSEKPYNCEVC-GYATSRMSDLKEH-------IARHTVEKPYKCDISGYGTVEMSHFKKH 392
Query: 106 TLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G K +KC +C YGA L+ H+ +KHS
Sbjct: 393 IRTKHTGKKPYKCEVCGYGAAHLSNLKLHIIDKHS 427
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +F + D L H + ++ + C CDY ++R H H
Sbjct: 125 PHKCPTC-DFAAVDKTCLKNH-------LATHSIERPYSCEICDYSAKTKDHLRQHMTTH 176
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
+K +KC CSY + Q L+ H+
Sbjct: 177 AVEKPYKCDACSYSSAQLSNLKRHM 201
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C Y T +++ H H +K +KC + YG + + H++ KH+ K
Sbjct: 346 YNCEVCGYATSRMSDLKEHIARHTVEKPYKCDISGYGTVEMSHFKKHIRTKHTGK 400
>gi|260781629|ref|XP_002585907.1| hypothetical protein BRAFLDRAFT_135307 [Branchiostoma floridae]
gi|229270973|gb|EEN41918.1| hypothetical protein BRAFLDRAFT_135307 [Branchiostoma floridae]
Length = 528
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
++C C Y T++ + H IH G+K FKC C + A QK + +H KH
Sbjct: 117 YMCGECGYRTVLKYTLSTHMKIHTGEKPFKCDQCDFSAIQKSHIDYHKATKH 168
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T++ + H IH G+K +KC C Y A QK L H+ H+
Sbjct: 31 YMCGECGYRTVLMSTLSRHMRIHTGEKPYKCDQCDYSATQKPSLDKHIAENHT 83
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C CDY + N+ NHT H GDK + C C Y Q+ L H++
Sbjct: 322 YMCDQCDYSAALKANLDNHTAAKHTGDKPYMCVECGYRPAQRSSLSRHMRT 372
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T+ + H H G+K +KC LC Y A +K L H+ KHS
Sbjct: 174 YMCSECGYRTVQKSKLSRHMKTHTGEKPYKCDLCDYSAARKFNLDKHL-AKHS 225
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
++CV C Y ++ H H G+K +KC C Y A QK L N+H TK K
Sbjct: 351 YMCVECGYRPAQRSSLSRHMRTHTGEKPYKCEQCDYSAAQKTTL-----NEHRTKHK 402
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 89 CVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
C C+Y + N+ NHT H+G+K + C C Y QK KL H++
Sbjct: 267 CDQCNYSASLKANLDNHTAAKHIGEKPYMCGECGYRTVQKSKLSRHMRT 315
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T+ + H H G+K + C C Y A K L H KH+
Sbjct: 294 YMCGECGYRTVQKSKLSRHMRTHTGEKPYMCDQCDYSAALKANLDNHTAAKHT 346
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CDY ++ H H G+K +KC C + A QK + +H+ KH+
Sbjct: 59 YKCDQCDYSATQKPSLDKHIAENHTGEKPYKCDQCDFSAMQKSHIDYHIATKHT 112
>gi|260815777|ref|XP_002602649.1| hypothetical protein BRAFLDRAFT_81929 [Branchiostoma floridae]
gi|229287960|gb|EEN58661.1| hypothetical protein BRAFLDRAFT_81929 [Branchiostoma floridae]
Length = 254
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
++C C Y T N+ H H G+K FKC C Y A K L H+K KH+T
Sbjct: 134 YMCGECGYRTAHKPNLSKHIKTHTGEKPFKCDQCDYSAVSKSNLDDHLKAKHTT 187
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + H IH G+K +KC LC Y A K L +H+K KH+
Sbjct: 77 YMCGECGYRAARKFTLSQHMRIHTGEKPYKCELCDYSAVNKCTLHYHLKAKHT 129
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G+K FKC C Y A QK L +H+
Sbjct: 21 YMCGECGYRTAHNSTFSRHMRTHTGEKTFKCDQCEYSAAQKSVLDYHL 68
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y I + H IH +K +KC C + A +K L H + KHS
Sbjct: 191 YMCGICGYRAAIKSRLIQHMRIHTREKPYKCDQCDFSAARKSSLNRHCQAKHS 243
>gi|260823160|ref|XP_002604051.1| hypothetical protein BRAFLDRAFT_208131 [Branchiostoma floridae]
gi|229289376|gb|EEN60062.1| hypothetical protein BRAFLDRAFT_208131 [Branchiostoma floridae]
Length = 345
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+Y ++C C+Y T+ ++ H H G+K FKC C Y A K L H+ +HS
Sbjct: 259 EYPYMCGECEYRTVHKSHLSRHMRTHTGEKPFKCDQCDYSAISKSYLNRHISRQHS 314
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T+ + H H G+K +KC C Y A QK L H+ KH+
Sbjct: 149 YMCDECGYRTVKKSRLSLHMRTHTGEKPYKCDQCDYSASQKSNLDNHIAAKHT 201
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T S +H H G+K FKC C Y A QK L H K KH+
Sbjct: 206 YMCGECGYGTTYSSTFSSHMRTHTGEKPFKCDQCDYSAAQKCYLDQH-KTKHT 257
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 45 LNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRN 104
+++ P C C +F+++ ++L +H +V+ K F+C C Y ++
Sbjct: 3 IHTAKPFKCNQC-DFSAAQKSILDKH------LVKHTGEK-PFMCGECGYRAAQKSDLSK 54
Query: 105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H IH G+K +KC C Y +K L H+
Sbjct: 55 HMRIHTGNKPYKCGQCDYSTTRKGHLDQHL 84
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C T+ +L LM+H+ P ++C C Y T
Sbjct: 55 HMRIHTGNKPYKCGQCDYSTTRKGHLDQHLMKHTGEKP-----------YMCGECGYRTA 103
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H GDK +KC C + A +K L H+
Sbjct: 104 KKCNLSLHMRTHTGDKPYKCDQCDFSAIRKSTLDQHL 140
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C T+ NL + +R + C CD+ I + H + H
Sbjct: 92 PYMCGECGYRTAKKCNLSLH--------MRTHTGDKPYKCDQCDFSAIRKSTLDQHLVKH 143
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
GDK + C C Y +K +L H++
Sbjct: 144 TGDKPYMCDECGYRTVKKSRLSLHMRT 170
>gi|158294369|ref|XP_315558.4| AGAP005555-PA [Anopheles gambiae str. PEST]
gi|157015532|gb|EAA11339.4| AGAP005555-PA [Anopheles gambiae str. PEST]
Length = 695
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 50 PQSCKHCKN-FTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
P CKHC N FT+S L+ H RP C CDY ++ ++ H
Sbjct: 182 PHRCKHCDNCFTTS--GELIRHIRYRHTHERP------HKCTECDYASVELSKLKRHIRT 233
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K F+C C+Y + K KL H++
Sbjct: 234 HTGEKPFQCPHCTYASPDKFKLTRHMR 260
>gi|62870103|gb|AAY18208.1| CTCF-like protein [Anopheles gambiae]
Length = 680
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 50 PQSCKHCKN-FTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
P CKHC N FT+S L+ H RP C CDY ++ ++ H
Sbjct: 182 PHRCKHCDNCFTTS--GELIRHIRYRHTHERP------HKCTECDYASVELSKLKRHIRT 233
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K F+C C+Y + K KL H++
Sbjct: 234 HTGEKPFQCPHCTYASPDKFKLTRHMR 260
>gi|260833120|ref|XP_002611505.1| hypothetical protein BRAFLDRAFT_63860 [Branchiostoma floridae]
gi|229296876|gb|EEN67515.1| hypothetical protein BRAFLDRAFT_63860 [Branchiostoma floridae]
Length = 558
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C++ TI + ++ NH H G++ FKC C Y A QK +L+ H++ KH+
Sbjct: 161 TCPHCEFETISTTSLANHIRTHTGERPFKCPQCDYSAAQKAQLKRHIQCKHT 212
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CD+ T ++++ H H G+K KC LC Y ++Q L+ H+
Sbjct: 387 FHCEQCDFSTARKEDLKRHVAKHTGEKPHKCELCDYSSWQSHHLKRHM 434
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C CDY + S +++ H + H G+K +KC +C Y A Q+ L+ H+
Sbjct: 417 CELCDYSSWQSHHLKRHMITHTGEKPYKCEICGYAASQRCSLKAHM 462
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C CD+ ++ ++++ H H G+K + C CSY + QK +L+ H+
Sbjct: 277 CTQCDFSSVSKKSLKLHMTTHTGEKPYSCEFCSYASRQKGQLKIHM 322
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 15/111 (13%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVAC 92
C +M+ P C+ C T++ +L + H+ P ++C C
Sbjct: 456 CSLKAHMTKHTGEKPFQCEECDFSTATKAHLANHMTRHTGERP-----------YMCEVC 504
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
Y + +R H IH K +KC C Y A QK L H+ N H+ K K
Sbjct: 505 GYAAAVKGGLRQHMAIHAVVKPYKCDQCDYTAAQKGHLNIHLAN-HAKKKK 554
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C CD+ T+ +M H H G+K F+C C Y A QK L+ HV
Sbjct: 68 CPHCDHETVDKTSMTIHIRTHTGEKPFRCKQCDYSAAQKGALKRHV 113
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY I + H IH G+K F C C + +KE L+ HV
Sbjct: 359 YKCKMCDYSAISMSRVERHMAIHTGEKPFHCEQCDFSTARKEDLKRHV 406
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 52 SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL-IHL 110
SC HC + T ++ + +R + F C CDY ++ H + +H
Sbjct: 67 SCPHCDHETVDKTSMTIH--------IRTHTGEKPFRCKQCDYSAAQKGALKRHVMAVHT 118
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHV 134
G++ + C C Y A QK L+ H+
Sbjct: 119 GERPYHCGYCDYSAVQKIALEKHM 142
>gi|260781334|ref|XP_002585772.1| hypothetical protein BRAFLDRAFT_111167 [Branchiostoma floridae]
gi|229270813|gb|EEN41783.1| hypothetical protein BRAFLDRAFT_111167 [Branchiostoma floridae]
Length = 1016
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++++ + L +H M + K ++C C Y T +
Sbjct: 473 HMRTHTGEKPYKCDQC-DYSAAEQSTLDDH------MTKHTGQK-PYMCGECGYRTALRA 524
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++ H H G+K +KC LC Y A +K L HVK K+
Sbjct: 525 SLSRHMKTHTGEKPYKCDLCDYSAARKSTLSAHVKRHTGEKL 566
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY + ++ H H G+K +KC C Y A QK L HV+
Sbjct: 39 FKCDQCDYSAVQKTSLDFHLAKHTGEKSYKCDQCDYSALQKSSLSDHVRT 88
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T ++ H + H G+K FKC C + +K +L H+ KH+ K
Sbjct: 901 YMCGECGYRTAQKSDLSKHMITHTGEKPFKCNQCDFSTGRKSRLDIHL-TKHTGK 954
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H IH G+K +KC C Y A QK L H+
Sbjct: 399 YMCEECGYRTSLKSDLSRHIRIHTGEKPYKCDQCDYSAAQKFNLVRHL 446
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y N+ H H G+K FKC C Y A +K L HV+
Sbjct: 623 YMCDECGYRAACKSNLSRHMRTHTGEKPFKCDQCDYSATRKSTLHQHVE 671
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H IH GDK +KC C Y A +K L+ H++
Sbjct: 845 YKCDQCDYSAAHKSSLVIHLAIHTGDKPYKCDQCDYSATRKFTLELHLR 893
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L +H E + P ++C C Y T
Sbjct: 641 HMRTHTGEKPFKCDQC-DYSATRKSTLHQHVEK---HIGEKP----YMCGECGYRTNQKS 692
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ NH H G+K +KC C Y A K L H+
Sbjct: 693 TLSNHMRTHTGEKPYKCDQCDYSAAHKFSLDIHL 726
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
VR + + C CDY N+ H L H G+K + C C + A QK L H++
Sbjct: 86 VRTHTGEKPYKCDQCDYSVAHKSNLAQHVLKHTGEKPYMCGECGFRARQKGSLLRHMRT 144
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY T + H H GDK +KC C Y A +K L H+
Sbjct: 567 YKCDQCDYSTTQKSSFNIHLARHTGDKPYKCDQCDYSAARKYHLDLHL 614
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CD+ T + H H G K FKC C Y A QK L H++
Sbjct: 929 FKCNQCDFSTGRKSRLDIHLTKHTGKKPFKCGQCDYSAVQKSDLVRHLR 977
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY + ++ +H H G+K +KC C Y K L HV
Sbjct: 67 YKCDQCDYSALQKSSLSDHVRTHTGEKPYKCDQCDYSVAHKSNLAQHV 114
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + H IH GDK +KC C Y +K L H++
Sbjct: 789 YKCDQCDYSAAQKSTLVIHLAIHTGDKPYKCDQCGYRTARKSGLSKHMRT 838
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY + H H+G+K + C C Y QK L H++
Sbjct: 651 FKCDQCDYSATRKSTLHQHVEKHIGEKPYMCGECGYRTNQKSTLSNHMRT 700
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T + H H G+K +KC C Y A K L H+
Sbjct: 817 YKCDQCGYRTARKSGLSKHMRTHTGEKPYKCDQCDYSAAHKSSLVIHL 864
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY + ++ H H G+K + C C Y Q+ L H++
Sbjct: 957 FKCGQCDYSAVQKSDLVRHLRKHTGEKPYMCGECGYRTSQRSDLSKHMRT 1006
>gi|260823012|ref|XP_002603977.1| hypothetical protein BRAFLDRAFT_71735 [Branchiostoma floridae]
gi|229289302|gb|EEN59988.1| hypothetical protein BRAFLDRAFT_71735 [Branchiostoma floridae]
Length = 1154
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C YFT N+ H H G+K FKC C Y A +K L H++
Sbjct: 528 YMCEECGYFTANRSNLTAHIRTHTGEKPFKCDQCDYSAARKSDLSRHIR 576
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 16/105 (15%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLL----MEHSENCPCMVRPDPVKYKFICVACDYFT 96
+M P C C N++++ + L M+H+ P ++C C + T
Sbjct: 924 HMRTHTGQKPYKCDQC-NYSAAQKSTLDQHLMKHTGEKP-----------YMCGECGHRT 971
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H IH G++++KC C Y A QK H+ KH+++
Sbjct: 972 TTKSDLSRHMRIHTGERRYKCDQCDYSAAQKVNFDAHIAAKHTSE 1016
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + +L LM+HS P F+C C Y
Sbjct: 265 HMRTHTGEKPYKCDQCDYSAAEKGHLDQHLMKHSGEKP-----------FMCGECGYRAA 313
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
N+ H H GDK +KC C Y + QK+ L H N
Sbjct: 314 QRSNLSQHMRTHTGDKPYKCDQCDYSSAQKDCLDKHRTN 352
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C FT++ NL +R + F C CDY ++ H H
Sbjct: 527 PYMCEECGYFTANRSNLTAH--------IRTHTGEKPFKCDQCDYSAARKSDLSRHIRTH 578
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+K +KC C Y A K L H+ +KHS++
Sbjct: 579 TREKPYKCDHCDYSAAHKSGLDQHL-SKHSSE 609
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L EH + + KY + C C Y T
Sbjct: 377 HMRTHTGERPFKCNQC-DYSATHKSTLDEH------LTKHTGEKY-YKCKECGYRTTRKT 428
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H IH G K FKC C Y A QK L+ H+
Sbjct: 429 HLYQHMRIHTGQKPFKCDQCDYSAAQKSALKQHL 462
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C HC +L L +HS N P ++C C Y T ++ H
Sbjct: 737 PYKCDHCDYSAVQKSSLDHHLAKHSGNKP-----------YMCGECGYSTARKNDLSVHI 785
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
IH GDK +KC C Y A K L H+
Sbjct: 786 RIHTGDKPYKCDQCDYSAAVKSTLDQHL 813
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C + T N+ H H G+K FKC C Y A QK L HV
Sbjct: 1075 FMCGECGHRTARKSNLSRHMRTHSGEKPFKCNQCDYSAAQKCTLDRHV 1122
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T + H H G++++KC C Y A QK L H+
Sbjct: 1019 FMCGECGYRTADRSTLSRHMRTHTGERRYKCDQCDYSAVQKGDLDKHL 1066
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H + H G+K +KC C Y A QK L H+ KHS
Sbjct: 710 YMCGECGYRTSQRSKLSRHMITHTGEKPYKCDHCDYSAVQKSSLDHHLA-KHS 761
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY ++ H L H G+K + C C Y QK KL H++
Sbjct: 443 FKCDQCDYSAAQKSALKQHLLKHTGEKPYMCGECGYRTTQKSKLSQHMR 491
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H H +K FKC C Y A +K H+ KHS
Sbjct: 471 YMCGECGYRTTQKSKLSQHMRKHTEEKPFKCDKCDYSAARKSNFNRHITEKHS 523
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y N+ H H G K +KC C+Y A QK L H+
Sbjct: 906 YMCGECGYRAAYKYNLSKHMRTHTGQKPYKCDQCNYSAAQKSTLDQHL 953
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++S+ + L +H N +P ++C C Y T I ++ H H
Sbjct: 330 PYKCDQC-DYSSAQKDCLDKHRTN-HTGEKP------YMCDHCGYRTAIKLHLSRHMRTH 381
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G++ FKC C Y A K L H+
Sbjct: 382 TGERPFKCNQCDYSATHKSTLDEHL 406
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C + N+ H H GDK +KC C Y A +K L H K
Sbjct: 822 YMCGECGFRAAQKSNLSRHMRTHTGDKPYKCDQCEYSAVEKHHLIGHQK 870
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 47 SVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
S P C C + ++D + L H +R + ++ C CDY + ++ H
Sbjct: 1015 SEKPFMCGEC-GYRTADRSTLSRH-------MRTHTGERRYKCDQCDYSAVQKGDLDKHL 1066
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K F C C + +K L H++
Sbjct: 1067 ATHTGEKPFMCGECGHRTARKSNLSRHMR 1095
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T ++ H H G+K +KC C Y A +K L H+
Sbjct: 247 YMCGECGFRTTYEDSLSRHMRTHTGEKPYKCDQCDYSAAEKGHLDQHL 294
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F+C C Y T + H IH G+K + C C Y A K L H++
Sbjct: 878 FMCGECGYRTADRSTLSRHMKIHSGEKPYMCGECGYRAAYKYNLSKHMR 926
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 83 VKYKFICVACDY-------FTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
V+ ++C C Y ++ ++ H IH G+K ++C C Y A QK +L
Sbjct: 180 VEKPYMCGKCGYRAAQRSNLSVKKSDLSQHMKIHTGEKPYRCDQCDYSAAQKSQL----- 234
Query: 136 NKHSTK 141
NKH TK
Sbjct: 235 NKHLTK 240
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 14/89 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + T+ NL + HS P F C CDY + H
Sbjct: 1074 PFMCGECGHRTARKSNLSRHMRTHSGEKP-----------FKCNQCDYSAAQKCTLDRHV 1122
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ H G+K + C C Y A + +L H++
Sbjct: 1123 MTHTGEKPYICEECGYAAANRVELSRHIR 1151
>gi|402882366|ref|XP_003904715.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 335 [Papio
anubis]
Length = 1346
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 624 RFKCEFCEFLCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 677
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 613 LLTHIQAVANRRF-------KCEFCE-FLCEDKKALLNHQLS---HVSDKPFK----CSF 657
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 658 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 711
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1081 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1131
>gi|355563071|gb|EHH19633.1| NRC-interacting factor 1 [Macaca mulatta]
Length = 1366
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 644 RFKCEFCEFLCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 697
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 633 LLTHIQAVANRRF-------KCEFCE-FLCEDKKALLNHQLS---HVSDKPFK----CSF 677
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 678 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 731
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1101 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1151
>gi|260832854|ref|XP_002611372.1| hypothetical protein BRAFLDRAFT_134906 [Branchiostoma floridae]
gi|229296743|gb|EEN67382.1| hypothetical protein BRAFLDRAFT_134906 [Branchiostoma floridae]
Length = 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 60 TSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL 119
+S DV+ L +H+ P F+C C+Y T N+ H H G+K +KC
Sbjct: 590 SSLDVHHLAKHTSEKP-----------FVCDKCEYKTAQRSNLTQHMKTHTGEKPYKCNQ 638
Query: 120 CSYGAYQKEKLQFHV 134
C Y A QK L HV
Sbjct: 639 CDYSAAQKSSLDQHV 653
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+IC C Y T N+ +H +H G K +KC C Y A QK L++H KH+++
Sbjct: 67 YICDECGYKTAEKSNLSSHVRLHTGKKPYKCDQCDYSAAQKVSLKYHHLAKHTSE 121
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T++ N+ H IH G+K +KC C Y A +K L H KH+
Sbjct: 124 YVCDECGYKTVVKSNLSRHVRIHTGEKPYKCDQCDYSAARKCSLDLHHLAKHT 176
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T++ N+ H IH G+K +KC C Y A QK L H+
Sbjct: 181 YVCDECGYKTVVKSNLSQHVRIHTGEKPYKCDQCDYSAAQKCSLDQHL 228
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+IC C Y T N+ +H IH G+K +KC C Y A K L H KH+++
Sbjct: 294 YICDECGYKTAQKSNLSSHVRIHTGEKPYKCDQCDYSAAWKASLDHHHLAKHTSE 348
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+IC C Y T N+ +H IH G+K +KC C Y A K L H KH+++
Sbjct: 492 YICDECGYKTAQKSNLSSHVRIHTGEKPYKCDQCDYSAAWKASLDHHHLAKHTSE 546
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQK 127
++C C Y T++ N+ H IH G+K +KC C Y A QK
Sbjct: 237 YVCDECGYKTVVKSNLSRHVRIHTGEKPYKCDQCDYSAAQK 277
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+IC C Y + + H H GDK +KC C Y A QK L H KH+++
Sbjct: 549 YICDECGYRAALISTLARHMRTHTGDKPYKCDQCDYSAAQKSSLDVHHLAKHTSE 603
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 26/57 (45%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
VR K + C CDY ++ H H G+K FKC C Y A QK L H+
Sbjct: 2 VRIHTGKKPYKCDQCDYSAARKYHLDRHRAKHTGEKPFKCDQCDYSAAQKSSLDKHL 58
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+IC C Y T + H H G+K + C C Y A +K +L +H KH+++
Sbjct: 351 YICDECGYRTACISTLARHMRTHTGEKPYNCDQCDYSAARKAQLDYHHLAKHTSE 405
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
K +IC C Y + H H G K +KC C Y A QK L H+
Sbjct: 433 KKSYICEECGYRAARKSTLDRHHAKHTGKKTYKCDQCDYSAAQKSHLDQHL 483
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC 120
F+C C Y T + N+ H IH G+K FKC C
Sbjct: 662 FVCDECGYKTALKLNLSRHVRIHTGEKPFKCDQC 695
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T + + H IH G K + C C Y A +K L H
Sbjct: 408 YVCDECGYKTALKSYLSQHVQIHTGKKSYICEECGYRAARKSTLDRH 454
>gi|384948732|gb|AFI37971.1| zinc finger protein 335 [Macaca mulatta]
Length = 1346
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 624 RFKCEFCEFLCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 677
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 613 LLTHIQAVANRRF-------KCEFCE-FLCEDKKALLNHQLS---HVSDKPFK----CSF 657
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 658 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 711
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1081 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1131
>gi|260811195|ref|XP_002600308.1| hypothetical protein BRAFLDRAFT_118285 [Branchiostoma floridae]
gi|229285594|gb|EEN56320.1| hypothetical protein BRAFLDRAFT_118285 [Branchiostoma floridae]
Length = 1939
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYK---FICVACDYFTIISQNMRNHT 106
P C+HC +++++ LL +H P Y+ F+C C Y ++ H
Sbjct: 1651 PYKCEHC-DYSAAQKGLLNQHMAK---HTGERPYVYRECRFMCEKCGYMAAKKSDLSRHM 1706
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G++ +KC C Y A QK+ L H+
Sbjct: 1707 RKHTGERPYKCDQCDYSAAQKDTLNRHI 1734
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ C C+Y TI N+ H H G+K +KC C Y A QK L H+
Sbjct: 1623 RYKCGECEYRTITRSNLSVHMRQHTGEKPYKCEHCDYSAAQKGLLNQHM 1671
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 14/97 (14%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTII 98
M+ P +C C+ T++ NL L H+ P + C CDY
Sbjct: 1 MAKHTGEKPYTCGECEFRTATKGNLTKHLRNHAGEKP-----------YKCDQCDYVAAW 49
Query: 99 SQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+N+ H H G+K +KC C + A K L H++
Sbjct: 50 KKNLDQHMTKHTGEKPYKCGQCEFRAAAKSNLVRHMR 86
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
++C C Y T+ ++ H H G+K +KC +C Y A L+ H K KH++
Sbjct: 1887 YVCEECGYGTVSKSHLTIHLRKHTGEKPYKCDMCDYSAAHANSLKLH-KKKHTS 1939
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C++ T M H H G+K +KC LC Y A +K L H+
Sbjct: 927 YKCEECEFRTDNRSKMSEHVRTHSGEKPYKCDLCDYSAARKSTLDQHM 974
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H H G K +KC C Y + +K L+ H KHS
Sbjct: 1213 YMCGECGYRTARRSTLTVHMREHTGQKPYKCDQCDYSSARKNHLRKHAVEKHS 1265
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C+Y T+ ++ H H GD+ KC C Y + + L+ H+
Sbjct: 1298 FMCGECEYRTVARSDLAKHMRKHTGDRPHKCEQCDYSSAPNDDLRKHM 1345
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY T + H H G+K +KC LC Y A ++ L H+
Sbjct: 1745 YKCEECDYRTDGRYKLSAHVRKHTGEKLYKCDLCDYSAALRKALNRHI 1792
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C + T S + NH H G++ +KC C + A QK LQ H
Sbjct: 1568 YLCEKCGFRTANSFCLSNHMTTHTGERPYKCDQCDFAAGQKPTLQRH 1614
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+ C +F + L EH VR + + C CDY ++ H H G+
Sbjct: 1805 CEEC-DFRTDGKFKLTEH-------VRKHTGEKPYKCNICDYSAAWKLSLAAHLRKHTGE 1856
Query: 113 KQFKCCLCSYGAYQKEKLQFHV 134
K +KC LC Y A K +L H+
Sbjct: 1857 KPYKCDLCDYSAAVKRRLDQHM 1878
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ P C C+ ++ NL+ +R + ++C C +
Sbjct: 56 HMTKHTGEKPYKCGQCEFRAAAKSNLVRH--------MRKHTGEKPYMCEKCGFMAAKMS 107
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ +H H G+K +KC C Y A +K L H+
Sbjct: 108 DLSSHMRTHTGEKPYKCDQCDYSAARKAHLDEHM 141
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C++ T +++ H H G+K +KC C Y A QK L H+
Sbjct: 613 YNCGLCEFKTTCKSSLKTHMANHTGEKPYKCDQCDYSAAQKGHLDRHM 660
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 9/95 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+MS P C C+ T++ +L+ +R K C CDY +
Sbjct: 312 HMSHHTGKKPYKCGECEYRTAAKHDLVRH--------MRKHTGKRPHKCDQCDYSSACKN 363
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+R H H G+ F C C Y A + L H+K
Sbjct: 364 NLRKHMFKH-GETPFLCGECGYMAGDRSDLSKHMK 397
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
K+ C CD+ T + H H G+K +KC +C Y A K L H++
Sbjct: 1802 KYKCEECDFRTDGKFKLTEHVRKHTGEKPYKCNICDYSAAWKLSLAAHLR 1851
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C+Y T N+ H H G+K KC LC Y A K+ + H+
Sbjct: 780 RHKCEKCEYRTTTRSNLSVHMRQHTGEKPHKCDLCDYSAALKKTINRHM 828
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CD+ ++ H L H G+K++KC C Y + L H++
Sbjct: 1596 YKCDQCDFAAGQKPTLQRHKLRHTGEKRYKCGECEYRTITRSNLSVHMR 1644
>gi|260835596|ref|XP_002612794.1| hypothetical protein BRAFLDRAFT_233065 [Branchiostoma floridae]
gi|229298174|gb|EEN68803.1| hypothetical protein BRAFLDRAFT_233065 [Branchiostoma floridae]
Length = 354
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
++C C Y T++ + H IH G+K FKC C + A QK + +H KH
Sbjct: 121 YMCGECGYRTVLKYTLSTHMKIHTGEKPFKCDQCDFSAIQKPHIDYHKATKH 172
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y ++ + H IH G+K +KC C Y A QK L H+ H+
Sbjct: 35 YMCGECGYRAVLMSTLSRHMRIHTGEKPYKCDQCDYSATQKPSLDKHIAENHT 87
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
++C C Y T+ + H H GDK + C C Y A K L H KH++
Sbjct: 239 YMCGECGYRTVQKSKLSRHMRTHTGDKPYMCDQCDYSAALKANLDNHTAAKHTS 292
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
P K C C+Y + N+ NHT H+G+K + C C Y QK KL H++
Sbjct: 205 PYKEILKCDQCNYSASLKANIDNHTAAKHIGEKPYMCGECGYRTVQKSKLSRHMRT 260
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 13/61 (21%)
Query: 87 FICVACDYFTI----ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++CV C Y + +S+NMR HT G+K +KC C Y A QK L N+H TK
Sbjct: 296 YMCVECGYRSAQRSSLSRNMRTHT----GEKPYKCEQCDYSAAQKTTL-----NEHRTKH 346
Query: 143 K 143
K
Sbjct: 347 K 347
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CDY ++ H H G+K +KC C + A QK + +H+ KH+
Sbjct: 63 YKCDQCDYSATQKPSLDKHIAENHTGEKPYKCDQCDFSAMQKSHIDYHIATKHT 116
>gi|109091739|ref|XP_001105111.1| PREDICTED: zinc finger protein 335-like isoform 3 [Macaca mulatta]
Length = 1346
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 624 RFKCEFCEFLCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 677
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 613 LLTHIQAVANRRF-------KCEFCE-FLCEDKKALLNHQLS---HVSDKPFK----CSF 657
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 658 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 711
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1081 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1131
>gi|380815490|gb|AFE79619.1| zinc finger protein 335 [Macaca mulatta]
Length = 1346
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 624 RFKCEFCEFLCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 677
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 613 LLTHIQAVANRRF-------KCEFCE-FLCEDKKALLNHQLS---HVSDKPFK----CSF 657
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 658 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 711
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1081 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1131
>gi|290475053|ref|YP_003467937.1| hypothetical protein XBJ1_2038 [Xenorhabdus bovienii SS-2004]
gi|289174370|emb|CBJ81164.1| hypothetical protein XBJ1_2038 [Xenorhabdus bovienii SS-2004]
Length = 260
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
F C C+Y + N++ H H+G+K F+C +C Y + +K+ L+ H+ H
Sbjct: 10 FQCDICEYTSPREDNLKRHMRAHIGEKPFQCDICEYTSTRKDNLKSHLSRMH 61
>gi|260806356|ref|XP_002598050.1| hypothetical protein BRAFLDRAFT_108622 [Branchiostoma floridae]
gi|229283321|gb|EEN54062.1| hypothetical protein BRAFLDRAFT_108622 [Branchiostoma floridae]
Length = 355
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y T N+ H H G+K +KC C Y A +K L H+ KH
Sbjct: 55 FMCGECGYRTANRSNLSRHMRTHTGEKSYKCDQCDYSAIRKSHLDCHIATKHG 107
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C C+Y T+ N+ H H G+K +KC C Y A QK L +H+ KHS
Sbjct: 254 FKCDQCNYATLHKPNLDRHVAAKHAGEKPYKCDQCDYSATQKSHLGYHIATKHS 307
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T+ + H H G+K ++C C Y A +K L H KHS++
Sbjct: 169 YMCGECGYRTVQKSRLSRHMRTHTGEKPYRCDQCDYSAARKPDLDNHAAAKHSSE 223
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H H G+K +KC C + A K + +H+ KH+
Sbjct: 112 YMCGECGYRTAEKSTLTVHMRTHTGEKPYKCDQCDFVAITKSHIDYHIATKHN 164
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T I + H IH ++ FKC C+Y K L HV KH+
Sbjct: 226 YMCGECGFRTAIKSILVKHMKIHTRERIFKCDQCNYATLHKPNLDRHVAAKHA 278
>gi|72028083|ref|XP_797592.1| PREDICTED: uncharacterized protein LOC593001 [Strongylocentrotus
purpuratus]
Length = 939
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C CDY ++ + ++ H H G+K +KC LC Y + KL+ H++
Sbjct: 531 CPLCDYLSVEASKIKRHMRSHTGEKPYKCTLCEYASTDNYKLKRHMR 577
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 24/122 (19%)
Query: 36 CQTCP-----------NMSFLNS-VIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPV 83
C+ CP +M ++++ P C C ++ S + + + H +R
Sbjct: 502 CELCPKAFGTSGELGRHMKYMHTHEKPHKCPLC-DYLSVEASKIKRH-------MRSHTG 553
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQ----FHVKNKHS 139
+ + C C+Y + + ++ H +H G++ F C C QK L+ HV N+ S
Sbjct: 554 EKPYKCTLCEYASTDNYKLKRHMRVHTGERPFNCSQCDQSFSQKSSLKEHEWKHVGNRPS 613
Query: 140 TK 141
K
Sbjct: 614 HK 615
>gi|449486211|ref|XP_002191848.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 335
[Taeniopygia guttata]
Length = 1474
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C CDY + + NH L H+ DK +KC +C Y ++++ L H+ KH+
Sbjct: 641 RFKCEFCDYVCEDKKVLLNHQLSHMNDKPYKCSVCKYSTFREDFLVSHMAVKHT 694
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
C C + + +++R H L H +K F C +C + L+FH + HS++ K
Sbjct: 1122 CPHCSFASKNKKDLRRHMLTHTNEKPFACQVCGQRFNRNGHLKFHTQRLHSSEGK 1176
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C ++ D +L+ H + + YK C
Sbjct: 630 LLTHIQAIANRRF-------KCEFC-DYVCEDKKVLLNHQ-----LSHMNDKPYK--CSV 674
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H+ ++
Sbjct: 675 CKYSTFREDFLVSHMAVKHTGGKPFACEFCHFTTKHKKNLRLHVQCRHADSFEE 728
>gi|260823080|ref|XP_002604011.1| hypothetical protein BRAFLDRAFT_71700 [Branchiostoma floridae]
gi|229289336|gb|EEN60022.1| hypothetical protein BRAFLDRAFT_71700 [Branchiostoma floridae]
Length = 704
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C + T N+ H H G+K +KC +C Y A QK L+ H KH+ K
Sbjct: 264 YMCGECGFRTAQKANLSKHMRTHTGEKPYKCDMCDYSAIQKVHLKQHTAAKHTGK 318
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+IC C Y N+ H H G+K +KC C Y A QK L H+ KH+++
Sbjct: 396 YICGQCGYKATNKGNIAKHVRTHTGEKPYKCDQCDYSATQKSHLNRHMATKHASE 450
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI- 108
P C C T+ NL +R + + C CDY I +++ HT
Sbjct: 263 PYMCGECGFRTAQKANLSKH--------MRTHTGEKPYKCDMCDYSAIQKVHLKQHTAAK 314
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G K FKC C Y A QK +L H+ KH+
Sbjct: 315 HTGKKPFKCDQCDYSAAQKARLTKHIAVKHT 345
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY N++ H + H G+K + C C Y A +K L H++
Sbjct: 595 YKCDQCDYSAAEKSNLKRHLVKHTGEKPYMCGECGYRAAEKNNLTKHLRR 644
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y T + H H G+K +KC C Y A +K L+ H+
Sbjct: 567 YICEQCGYRTTEKYRLSQHMKTHSGEKPYKCDQCDYSAAEKSNLKRHL 614
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C CDY ++ NH H GDK + C C Y +K +L H+K K
Sbjct: 539 YKCDQCDYSAGRKSHLDNHLASHTGDKPYICEQCGYRTTEKYRLSQHMKTHSGEK 593
>gi|260823096|ref|XP_002604019.1| hypothetical protein BRAFLDRAFT_57766 [Branchiostoma floridae]
gi|229289344|gb|EEN60030.1| hypothetical protein BRAFLDRAFT_57766 [Branchiostoma floridae]
Length = 705
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + N+ H H G+K +KC C Y A QK+ L HV
Sbjct: 476 YMCGECGYRTALKTNLSRHMRTHTGEKPYKCDQCDYSAAQKDTLDAHV 523
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 14/98 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTS--SDVNLLME-HSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C T+ SD++ M HS P ++C CDY
Sbjct: 135 HMRTHTGEKPYKCGECGYRTAYKSDLSRHMRTHSGEKP-----------YMCDQCDYSAT 183
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++ H H G+K +KC C Y A QK KL H++
Sbjct: 184 EKSHLDRHLRKHTGEKPYKCDQCDYSATQKSKLVRHIR 221
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C HC + +L L +H+ + P ++C C Y T
Sbjct: 550 HMRTHTGEKPYKCDHCDYSAAVKSSLDQHLAKHTGDKP-----------YMCEECGYRTA 598
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ ++ H H G+K +KC C Y A QK+ L H+
Sbjct: 599 RNFDLSKHMRTHTGEKPYKCDQCDYSAAQKQHLHSHL 635
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A QK L H+
Sbjct: 420 YMCGECGYRTARKSDLSKHMRSHTGEKPYKCDQCDYSAPQKNHLDLHL 467
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++D L H + P ++C C + T
Sbjct: 326 HMRTHTGEKPYKCDQC-DYSAADYTTLNNHQKK---HTGEKP----YMCGECGFRTTRKS 377
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G++ +KC C Y A QK L HV
Sbjct: 378 ILSAHVRTHTGERPYKCDQCDYSAGQKRDLDKHV 411
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 15/111 (13%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCM------------VRPDPVKY 85
+M P C C+ + NL L +H+ P M +R +
Sbjct: 56 HMKTHTGEKPYKCDQCEYAAAHKSNLDKHLRKHTGEKPYMCGESQKSTLDQHLRKHTGEK 115
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C C Y ++ ++ H H G+K +KC C Y K L H++
Sbjct: 116 PYTCGECGYRSVQKSDLSKHMRTHTGEKPYKCGECGYRTAYKSDLSRHMRT 166
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++ + L+ H +R + ++C C Y ++ H H
Sbjct: 200 PYKCDQC-DYSATQKSKLVRH-------IRKHTGEKPYMCGECGYRAARKSHLSRHMRTH 251
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFH 133
G+K +KC C Y A K L H
Sbjct: 252 TGEKPYKCDQCDYSAADKSSLDQH 275
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C F ++ ++L H VR + + C CDY +++ H + H
Sbjct: 363 PYMCGEC-GFRTTRKSILSAH-------VRTHTGERPYKCDQCDYSAGQKRDLDKHVVKH 414
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K + C C Y +K L H+++
Sbjct: 415 TGEKPYMCGECGYRTARKSDLSKHMRS 441
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY Q++ +H H G+K + C C + A +K L H++
Sbjct: 616 YKCDQCDYSAAQKQHLHSHLAKHTGEKPYMCGECGHRAARKSHLMVHMRT 665
>gi|260823000|ref|XP_002603971.1| hypothetical protein BRAFLDRAFT_71741 [Branchiostoma floridae]
gi|229289296|gb|EEN59982.1| hypothetical protein BRAFLDRAFT_71741 [Branchiostoma floridae]
Length = 644
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C C+ FT++D L +H E V+P + C CDY + + H H G
Sbjct: 360 CGQCE-FTTADKAGLSQHMET---HVKP------YRCDQCDYSAVREAELSIHLAKHSGK 409
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ +KC C Y A QK +H+ KHS +
Sbjct: 410 RPYKCDHCDYAAAQKPHFDYHMAAKHSGE 438
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T+ ++ H H G+K +KC C Y A +K KL HV+
Sbjct: 441 YMCGECGYRTVYRSSLSRHMRTHTGEKPYKCDQCDYSAAEKSKLSDHVR 489
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
N L +HS + P ++C C Y T ++ H H G+ +KC C+Y A
Sbjct: 570 NHLAKHSGDKP-----------YMCGECGYRTARKHHLSRHMRTHRGENPYKCDQCNYSA 618
Query: 125 YQKEKLQFHVKNKHSTKVK 143
+K L H+ +H T+ K
Sbjct: 619 TKKSHLTLHLTRRHPTETK 637
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++++ + L +H VR + + C CDY
Sbjct: 459 HMRTHTGEKPYKCDQC-DYSAAEKSKLSDH-------VRTHTGEKPYKCDQCDYSATQKS 510
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+ H + H GDK + C C Y QK H++
Sbjct: 511 NLDRHLVTHTGDKPYMCGECGYRTAQKSDFSKHMR 545
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 15/93 (16%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + NL L+ H+ + P ++C C Y T + H
Sbjct: 496 PYKCDQCDYSATQKSNLDRHLVTHTGDKP-----------YMCGECGYRTAQKSDFSKHM 544
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G+K +KC C Y A +K L H+ KHS
Sbjct: 545 RTHTGEKPYKCDQCDYSAARKSHLDNHLA-KHS 576
>gi|260783429|ref|XP_002586777.1| hypothetical protein BRAFLDRAFT_243240 [Branchiostoma floridae]
gi|229271903|gb|EEN42788.1| hypothetical protein BRAFLDRAFT_243240 [Branchiostoma floridae]
Length = 534
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++++ + L +H M + K ++C C Y T +
Sbjct: 202 HMRTHTGEKPYKCDQC-DYSAAEQSTLDDH------MTKHTGQK-PYMCGECGYRTALRA 253
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++ H H G+K +KC LC Y A +K L HVK K+
Sbjct: 254 SLSRHMKTHTGEKPYKCDLCDYSAARKSTLSAHVKRHTGEKL 295
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C F + +L L +H+ P ++C C Y T + ++ H
Sbjct: 99 PYKCDQCDYFAAQKCDLDRHLAKHTGEKP-----------YMCEECGYRTSLKSDLSRHI 147
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
IH G+K +KC C Y A QK L H+
Sbjct: 148 RIHTGEKPYKCDQCDYSAAQKFNLVRHL 175
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y N+ H H G+K FKC C Y A +K L HV+
Sbjct: 352 YMCDECGYRAACKSNLSRHMRTHTGEKPFKCDQCDYSATRKSTLHQHVE 400
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L +H E + P ++C C Y T
Sbjct: 370 HMRTHTGEKPFKCDQC-DYSATRKSTLHQHVEK---HIGEKP----YMCGECGYRTNQKS 421
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ NH H G+K +KC C Y A K L H+
Sbjct: 422 SLSNHMRTHTGEKPYKCDQCDYSAAHKYSLDIHL 455
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY T + H H GDK +KC C Y A +K L H+
Sbjct: 296 YKCDQCDYSTTQKSSFNIHLARHTGDKPYKCDQCDYSAARKYHLDLHL 343
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY + H H+G+K + C C Y QK L H++
Sbjct: 380 FKCDQCDYSATRKSTLHQHVEKHIGEKPYMCGECGYRTNQKSSLSNHMRT 429
>gi|383420671|gb|AFH33549.1| zinc finger protein 335 [Macaca mulatta]
Length = 1346
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 624 RFKCEFCEFLCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 677
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 613 LLTHIQAVANRRF-------KCEFCE-FLCEDKKALLNHQLS---HVSDKPFK----CSF 657
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 658 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 711
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1081 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1131
>gi|260813386|ref|XP_002601399.1| hypothetical protein BRAFLDRAFT_103420 [Branchiostoma floridae]
gi|229286694|gb|EEN57411.1| hypothetical protein BRAFLDRAFT_103420 [Branchiostoma floridae]
Length = 1077
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + N+ H H G+K +KC C Y A QK+ L HV
Sbjct: 468 YMCGECGYRTALKTNLSRHMRTHTGEKPYKCDQCDYSAAQKDTLDAHV 515
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 10/105 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSEN-------CPCMVRPDPVKYKFICV 90
+M P C C T+ L LM+HSE+ V K +IC
Sbjct: 654 HMRTHTGDKPYKCDQCDYSTAQKGMLDQHLMKHSEDVQESRGYTGRHVVKHTGKKPYICG 713
Query: 91 ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C Y T N+ HT H G+K +KC C Y A +K L H++
Sbjct: 714 ECGYRTERKSNLSQHTRTHTGEKPYKCDQCDYSAARKSSLDKHLQ 758
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D +L +HS P ++CV C Y ++ H H G+K +KC C Y
Sbjct: 199 DRHLAAKHSGEKP-----------YMCVECGYRATQKAHLSRHMRTHTGEKPYKCDQCDY 247
Query: 123 GAYQKEKLQFHVKNKHSTKVKD 144
A QK L H + KH+ K D
Sbjct: 248 SATQKSTLDRHQR-KHTAKHTD 268
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A QK L H+
Sbjct: 412 YMCGECGYRTARKSDLSKHMRTHTGEKPYKCYQCDYSAPQKNHLDLHL 459
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 38/103 (36%), Gaps = 20/103 (19%)
Query: 53 CKHCKNFTSSDVNL---LMEHSENCPCM-----------------VRPDPVKYKFICVAC 92
C C F + NL L +HS P M +R + + C C
Sbjct: 852 CDQCDYFAARKSNLDRHLRKHSGEKPYMCGECGYRATLKSYLSKHMRTHTGEKSYKCDQC 911
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
DYF N+ H H G+K + C C Y A Q L H++
Sbjct: 912 DYFAARKSNLDRHLRTHTGEKPYMCGECGYRAAQMSDLSKHMR 954
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H G+K +KC C Y A QK+ L H+
Sbjct: 580 YMCEECGYRTARNFDLSKHMRTHTGEKPYKCDQCDYSAAQKQHLHSHL 627
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H H G K +KC C Y A QK L H++ KHS
Sbjct: 766 YMCGECGYRTSQKSYLSRHMRTHTGGKPYKCDQCDYSAAQKPHLDRHLR-KHS 817
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+R + +++C C Y T ++ H H G+K +KC C Y A L H K
Sbjct: 115 LRKHTGEKRYMCGECGYMTAYKSDLSKHKRTHTGEKPYKCDQCDYSAADNTTLTNHQK 172
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + + H H G+K +KC C Y A +K L H++ KHS
Sbjct: 822 YMCGECGYRATLKSYLSKHMRTHTGEKSYKCDQCDYFAARKSNLDRHLR-KHS 873
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 22/116 (18%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEH------------------SENCPCM---VR 79
+M P C C +++++D + L++H S+ P + +R
Sbjct: 952 HMRTHTGEKPYKCDQC-DYSAADQSWLVKHKRKHTGEKPYMCDECGYRSDRKPTLAQHIR 1010
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ + C CDY + ++ +H H G+K + C C Y A Q+ L H+K
Sbjct: 1011 THTGEKPYKCDQCDYSAAVKHHLIDHQTRHSGEKPYMCGECGYRAAQRATLSNHMK 1066
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+R + +++C C Y T ++ H H G+K +KC C Y A L H K
Sbjct: 291 LRKHTGEKRYMCGECGYRTAYKSDLSKHIRTHTGEKPYKCDQCDYSAADNTTLTNHQK 348
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H H G+ +KC C Y A K L H+ KH+
Sbjct: 39 YMCGECGYRTADRSTLSRHMRTHTGENPYKCDRCDYSAAVKCNLDNHIAAKHT 91
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 30/79 (37%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K + + E N R + + C CDY ++ H IH G+K +
Sbjct: 708 KPYICGECGYRTERKSNLSQHTRTHTGEKPYKCDQCDYSAARKSSLDKHLQIHSGEKPYM 767
Query: 117 CCLCSYGAYQKEKLQFHVK 135
C C Y QK L H++
Sbjct: 768 CGECGYRTSQKSYLSRHMR 786
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY Q++ +H H G+K + C C + A +K L H++
Sbjct: 608 YKCDQCDYSAAQKQHLHSHLAKHTGEKPYMCGECGHRAARKSHLMVHMR 656
>gi|355784429|gb|EHH65280.1| NRC-interacting factor 1 [Macaca fascicularis]
Length = 1351
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 629 RFKCEFCEFLCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 682
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 618 LLTHIQAVANRRF-------KCEFCE-FLCEDKKALLNHQLS---HVSDKPFK----CSF 662
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 663 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 716
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1086 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1136
>gi|300797424|ref|NP_001179788.1| zinc finger protein 335 [Bos taurus]
gi|296480959|tpg|DAA23074.1| TPA: zinc finger protein 335 [Bos taurus]
Length = 1346
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 624 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 677
Score = 41.6 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 613 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 657
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ +D
Sbjct: 658 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFED 711
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F+C LC + L+FH++ HS
Sbjct: 1081 CSQCSFASKNKKDLRRHMLTHTNEKPFECQLCGQRFNRNGHLKFHIQRLHS 1131
>gi|440904616|gb|ELR55102.1| Zinc finger protein 335, partial [Bos grunniens mutus]
Length = 1342
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 620 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 673
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 609 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 653
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 654 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 707
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F+C LC + L+FH++ HS
Sbjct: 1077 CSQCSFASKNKKDLRRHMLTHTNEKPFECQLCGQRFNRNGHLKFHIQRLHS 1127
>gi|260787835|ref|XP_002588957.1| hypothetical protein BRAFLDRAFT_89148 [Branchiostoma floridae]
gi|229274129|gb|EEN44968.1| hypothetical protein BRAFLDRAFT_89148 [Branchiostoma floridae]
Length = 667
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + N+ H IH G+K +KC C Y A K L +H+
Sbjct: 448 YMCGECGYRTALKSNLSKHMRIHTGEKTYKCDQCDYSASTKSHLDYHL 495
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T N+ H H GDK +KC C Y A QK L+ H K
Sbjct: 616 YMCGECGYRTTQKSNLVKHMRTHTGDKPYKCNQCDYSAAQKSTLKKHCK 664
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K FKC C Y A QK L H+
Sbjct: 392 YVCGECGYRTAWGSHLSIHMRTHTGEKPFKCDQCDYSAAQKNNLDSHL 439
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 79 RPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ + V+ ++C C Y T N+ H H G+K +KC C Y A +K L +H+
Sbjct: 70 KANTVEKPYMCGECGYRTDRKSNLSKHMRTHTGEKPYKCDQCDYSASKKCNLDYHL 125
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + + H H G+K +KC C+Y A +K L H+
Sbjct: 504 YMCGECGYRATLKSTLSRHMRTHTGEKPYKCDQCNYSAARKSSLNQHL 551
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C+Y T ++ H H GDK +KC C Y A K L H+
Sbjct: 560 YRCGECEYKTTWKTDLAKHMRTHTGDKPYKCDQCDYSAAVKSSLDRHL 607
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C S NL L +H+ + P ++C C Y
Sbjct: 96 HMRTHTGEKPYKCDQCDYSASKKCNLDYHLAKHTGDKP-----------YMCGECGYRAT 144
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K +KC C+Y A K L H+
Sbjct: 145 LKSTSSRHMRTHTGEKPYKCDQCNYSAALKSSLNQHL 181
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A K L+ H+
Sbjct: 246 YMCGECGYRTAHKSHLSRHMRTHTGEKPYKCDQCDYSAAVKSNLKQHL 293
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T ++ H H GDK +KC C Y ++ L+ HV
Sbjct: 191 MCGECGYRTTWKSDLSVHMRTHTGDKPYKCDQCDYSTARQSTLKQHV 237
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + ++ H H GD+ + C C Y QK L H++
Sbjct: 588 YKCDQCDYSAAVKSSLDRHLAKHTGDEPYMCGECGYRTTQKSNLVKHMR 636
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY T ++ H + GDK + C C Y K L H++
Sbjct: 218 YKCDQCDYSTARQSTLKQHVAWYTGDKPYMCGECGYRTAHKSHLSRHMR 266
>gi|326434758|gb|EGD80328.1| zinc finger protein [Salpingoeca sp. ATCC 50818]
Length = 978
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 26/52 (50%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
K + C C Y T S N + H H G+K FKC LC+Y A L HVK
Sbjct: 856 KKVYECDKCSYTTTRSYNFKGHLRTHAGEKPFKCELCNYSAASHSNLIRHVK 907
>gi|260806350|ref|XP_002598047.1| hypothetical protein BRAFLDRAFT_252916 [Branchiostoma floridae]
gi|229283318|gb|EEN54059.1| hypothetical protein BRAFLDRAFT_252916 [Branchiostoma floridae]
Length = 299
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F+C C Y T+ ++ H H G+K +KC C Y A QK L+ H+ +H+ +
Sbjct: 143 FMCGECGYRTVNRSDLSRHMRTHTGEKPYKCEQCDYSAAQKPHLENHIAAQHTGE 197
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F+C C Y T N+ H H G+K +KC LC Y A K L H++
Sbjct: 1 FVCGECGYRTGDRSNLSKHMRTHTGEKPYKCDLCDYSAALKSSLSVHMR 49
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T ++ H H G+K +KC C Y A QK L+ H+ +H+ +
Sbjct: 86 YMCGECGYRTAQRSHLSRHMRTHSGEKPYKCDQCDYSAAQKPHLEHHIAAQHTGE 140
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
+ + D + L +H +R + + C CDY + ++ H H G++ +KC
Sbjct: 7 GYRTGDRSNLSKH-------MRTHTGEKPYKCDLCDYSAALKSSLSVHMRTHTGERPYKC 59
Query: 118 CLCSYGAYQKEKLQFHVKNKHS 139
C Y A +K L HV KH+
Sbjct: 60 DQCDYSATRKSNLDNHVAAKHT 81
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
F+C C Y T+ ++ H H G K +KC C Y A +K L H
Sbjct: 200 FMCGECGYRTVYRSDLSRHMRTHTGKKPYKCEQCDYYAARKSHLDEH 246
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C CDY N+ NH H GDK + C C Y Q+ L H++ K
Sbjct: 57 YKCDQCDYSATRKSNLDNHVAAKHTGDKPYMCGECGYRTAQRSHLSRHMRTHSGEK 112
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+R K + C CDY+ ++ H + H G+K + C +C Y + L H++
Sbjct: 219 MRTHTGKKPYKCEQCDYYAARKSHLDEHRMKHTGEKPYMCGVCGYRTAHQSYLSKHMR 276
>gi|260823044|ref|XP_002603993.1| hypothetical protein BRAFLDRAFT_71718 [Branchiostoma floridae]
gi|229289318|gb|EEN60004.1| hypothetical protein BRAFLDRAFT_71718 [Branchiostoma floridae]
Length = 540
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P +C HC +F++S + L H +P ++C C Y TI
Sbjct: 165 HMRTHTGEKPYNCDHC-DFSTSHKSNLDRHIAAKHTGEKP------YMCGGCGYRTIYRS 217
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G++ +KC C Y A QK L H+
Sbjct: 218 HLSRHMRTHTGERPYKCDKCDYSAAQKGDLDKHL 251
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
F+C C Y T+ ++ H IH G++ +KC C + A Q L H+ ++H+
Sbjct: 84 FMCGECGYRTVQMSDLTKHMRIHTGERPYKCDQCDFSAAQNYSLHSHMVDRHTA 137
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+IC C Y + ++ H H G+K +KC C Y A QK L H++
Sbjct: 373 YICGECGYRAVHKSDLSKHMRTHTGEKPYKCDQCDYSAAQKSTLDQHLR 421
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y N+ H H DK +KC C Y A QK L HV+ +H+ K
Sbjct: 485 YMCGECGYRAAQRSNLSRHMKTHTADKPYKCDQCDYSAAQKSTLNKHVR-RHTDK 538
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CDY H + H G+K +KC C Y A QK L H KHS
Sbjct: 316 YKCDQCDYSAAQKSTFDQHVIKHSGEKPYKCDQCDYSAAQKSTLDNHTVAKHS 368
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L +H +R ++C C Y T
Sbjct: 391 HMRTHTGEKPYKCDQC-DYSAAQKSTLDQH-------LRKHTGDKPYMCGECGYRTAQKS 442
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G K +KC C Y A +K H+
Sbjct: 443 NLSTHMRTHTGKKSYKCNQCDYAAARKSTWDIHL 476
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
FIC C Y + N+ H H GDK +KC C Y K L H++
Sbjct: 260 FICGECGYRSAQKSNLSTHMRTHRGDKPYKCDQCGYRTAWKSHLSQHMR 308
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T ++ H H G+K +KC C Y A QK HV
Sbjct: 288 YKCDQCGYRTAWKSHLSQHMRTHTGEKPYKCDQCDYSAAQKSTFDQHV 335
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 21/49 (42%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + H H GDK + C C Y QK L H++
Sbjct: 401 YKCDQCDYSAAQKSTLDQHLRKHTGDKPYMCGECGYRTAQKSNLSTHMR 449
>gi|390343152|ref|XP_785343.3| PREDICTED: uncharacterized protein LOC580177 [Strongylocentrotus
purpuratus]
Length = 987
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 58 NFTSSDVNLLMEHSE-------NCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
++ +D +L EH + N RP P + C CDY +++ H+ IH
Sbjct: 540 DYKCADKGILKEHIKHKHGLLLNKDSYGRPKPTP-TYACTVCDYVGRKPKSLEYHSRIHK 598
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVK 135
++QFKC LC Y + K L HV+
Sbjct: 599 ENRQFKCHLCPYASKTKNNLVLHVR 623
>gi|113931316|ref|NP_001039107.1| novel zinc finger protein [Xenopus (Silurana) tropicalis]
gi|89268765|emb|CAJ83131.1| novel zinc finger protein [Xenopus (Silurana) tropicalis]
Length = 234
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F C C Y +I + ++R H H +K +KC CSY QK+ L HV+ H+ ++
Sbjct: 140 FKCKLCSYASIDASSLRRHIRTHTSEKPYKCQQCSYSCIQKKSLDLHVRRHHTGEM 195
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C+Y T + ++ H +H G+K FKC LCSY + L+ H++ S K
Sbjct: 112 FQCQQCEYKTRLKASLIQHMRVHTGEKPFKCKLCSYASIDASSLRRHIRTHTSEK 166
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P CK C ++ S D + L H +R + + C C Y I +
Sbjct: 130 HMRVHTGEKPFKCKLC-SYASIDASSLRRH-------IRTHTSEKPYKCQQCSYSCIQKK 181
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H H + F+C C Y + K+ LQ H K H T+
Sbjct: 182 SLDLHVRRHHTGEMFECSFCHYSSPDKQLLQKHTKKHHVTE 222
>gi|260823100|ref|XP_002604021.1| hypothetical protein BRAFLDRAFT_71690 [Branchiostoma floridae]
gi|229289346|gb|EEN60032.1| hypothetical protein BRAFLDRAFT_71690 [Branchiostoma floridae]
Length = 725
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++ ++D + L+ H +R + ++C C Y
Sbjct: 599 HMRTHTGERPYKCDQC-DYCAADKSTLVRH-------IRKHTDEKPYMCGECGYRAAQKS 650
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++ H IH G+K +KC C Y A QK L HV N K
Sbjct: 651 HLSAHMRIHTGEKPYKCDQCDYSAAQKGTLDDHVANHTGEKT 692
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ N+ H H G++ +KC C Y A QK L H+
Sbjct: 63 YMCGECGYRTAVNANLSRHMRTHTGERPYKCDQCDYSAAQKSTLDNHL 110
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++ ++D + L+ H +R + ++C C Y
Sbjct: 487 HMRTHTGERPYKCDQC-DYCAADKSTLVRH-------IRKHTDEKPYMCGECGYRAAQKS 538
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H IH G+K +KC C Y A QK L H+ S K
Sbjct: 539 HLSAHMRIHTGEKPYKCDQCDYSAAQKSDLNKHLAKHTSEK 579
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L +H++ P ++C C Y T
Sbjct: 137 HMRTHTGERPYKCDKCDYSAAQKGNLNKHLAKHTDEKP-----------YMCGECGYRTA 185
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G++ +KC C+Y + +K L+ HV
Sbjct: 186 RKFDLSQHMRTHTGEQNYKCDQCNYSSSRKSHLEQHV 222
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C + T N+ H H G+K +KC C Y A QK L H+ S K
Sbjct: 413 YMCEECGFRTSRKFNLSAHMRTHTGEKPYKCDQCDYSAAQKSDLNKHLAKHTSEK 467
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C T+ + NL +R + + C CDY + NH + H
Sbjct: 62 PYMCGECGYRTAVNANLSRH--------MRTHTGERPYKCDQCDYSAAQKSTLDNHLVKH 113
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
GDK + C C + +K L H++
Sbjct: 114 TGDKPYMCGECGFRTTRKSHLSAHMR 139
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T ++ H H G++ +KC C Y A QK L H+
Sbjct: 119 YMCGECGFRTTRKSHLSAHMRTHTGERPYKCDKCDYSAAQKGNLNKHL 166
>gi|391324909|ref|XP_003736984.1| PREDICTED: uncharacterized protein LOC100899523 [Metaseiulus
occidentalis]
Length = 320
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
DP + +F C C + ++R H +H G+ +KC LCSYGA QK L H + H
Sbjct: 137 DPER-RFQCEFCPFRAYTKTSIRQHMFLHTGEVPYKCDLCSYGARQKFHLDRHRQKVHG 194
>gi|260832584|ref|XP_002611237.1| hypothetical protein BRAFLDRAFT_71198 [Branchiostoma floridae]
gi|229296608|gb|EEN67247.1| hypothetical protein BRAFLDRAFT_71198 [Branchiostoma floridae]
Length = 441
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
V +F C C Y +R HT H G+K +KC C Y A +K L H+ N
Sbjct: 62 VDKRFACTVCGYMAASKAYLRKHTRTHTGEKPYKCDQCDYAAARKGSLDKHMAN 115
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C+Y T + +H IH +K++KC C Y A QK L H+
Sbjct: 178 FLCGQCEYRTTNRYYLSDHMRIHSSEKRYKCDQCDYSAAQKGTLDRHM 225
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 85 YKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
Y F+C C+Y T ++ H H G K +KC C Y A +K L H+
Sbjct: 316 YNFMCGECEYRTAHKSSLTAHMRTHTGVKPYKCDQCDYSAAKKFALDRHM 365
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y T ++ H + H G+K +KC C + +K+ L H+ KH++K
Sbjct: 374 FFCGVCGYRTADKIDLSQHVIKHTGEKPYKCDQCDFSTTKKKYLNKHLA-KHTSK 427
>gi|111307825|gb|AAI21338.1| LOC733928 protein [Xenopus (Silurana) tropicalis]
Length = 222
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F C C Y +I + ++R H H +K +KC CSY QK+ L HV+ H+ ++
Sbjct: 128 FKCKLCSYASIDASSLRRHIRTHTSEKPYKCQQCSYSCIQKKSLDLHVRRHHTGEM 183
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C+Y T + ++ H +H G+K FKC LCSY + L+ H++ S K
Sbjct: 100 FQCQQCEYKTRLKASLIQHMRVHTGEKPFKCKLCSYASIDASSLRRHIRTHTSEK 154
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P CK C ++ S D + L H +R + + C C Y I +
Sbjct: 118 HMRVHTGEKPFKCKLC-SYASIDASSLRRH-------IRTHTSEKPYKCQQCSYSCIQKK 169
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H H + F+C C Y + K+ LQ H K H T+
Sbjct: 170 SLDLHVRRHHTGEMFECSFCHYSSPDKQLLQKHTKKHHVTE 210
>gi|260823058|ref|XP_002604000.1| hypothetical protein BRAFLDRAFT_71711 [Branchiostoma floridae]
gi|229289325|gb|EEN60011.1| hypothetical protein BRAFLDRAFT_71711 [Branchiostoma floridae]
Length = 1216
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C HC +++++D + L++H +R + ++C C + T
Sbjct: 292 HMRTHTGEKPYKCDHC-DYSAADKSTLVKH-------IRKHTGEKPYMCGECGHRTAEKS 343
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++ H H G+K +KC C + A +K L H+ KH+ V
Sbjct: 344 DLARHMRTHTGEKPYKCDQCDFSAAEKSTLDRHL-TKHTENV 384
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y N+ H H G+K +KC C Y A QK L H+ KH+
Sbjct: 653 YMCGECGYRAARKFNLSQHMKTHTGEKPYKCDQCDYSAAQKVNLDAHIAAKHT 705
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G++++KC CSY A QK L H+
Sbjct: 710 YMCGECGYRTNQRSTLSRHMKTHTGERRYKCDQCSYSAVQKGDLDKHL 757
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY T N+ NH H G+K + C C Y A +K L H++
Sbjct: 1051 YKCDQCDYSTGEKGNLANHQRKHTGEKPYMCEECGYRAARKAHLLLHIR 1099
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++D + L H R + ++C C + T + H H
Sbjct: 1106 PYKCDQC-DYSAADNSTLANHQ-------RKHTGEKPYMCGECGFRTTRKFILSGHMRTH 1157
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y +K L HV+ KHS
Sbjct: 1158 TGEKPYKCDQCDYSTGEKCNLVRHVRTKHS 1187
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T ++ H IH G+K +KC C Y +K L H +
Sbjct: 1023 YMCGDCGYMTAYKSDLSKHMRIHTGEKPYKCDQCDYSTGEKGNLANHQR 1071
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + ++ H IH G+K + C C Y A +K L H+K
Sbjct: 625 YKCDQCDYSAVQKSDLDKHLAIHTGEKPYMCGECGYRAARKFNLSQHMK 673
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H+G+K +KC C + A +K L H+
Sbjct: 544 YMCGECGYRTERKSNLSRHMRTHIGEKPYKCDQCDFSAARKSILDKHL 591
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 46 NSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
N P C+ C ++++ + L +H +R + + C C Y T + H
Sbjct: 241 NGEKPYLCEEC-GYSATRNSYLSQH-------MRTHTGEKPYKCGECGYRTADRSTLSRH 292
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K +KC C Y A K L H++
Sbjct: 293 MRTHTGEKPYKCDHCDYSAADKSTLVKHIR 322
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+R V+ + C C Y T + H H G+K +KC C Y A QK L H K
Sbjct: 159 LRIHAVEKPYKCGECGYRTAQRSALSRHMRTHTGEKPYKCDQCDYSAAQKINLVQHT-TK 217
Query: 138 HS 139
HS
Sbjct: 218 HS 219
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ HT H G+K +KC C + A K L H+
Sbjct: 967 YMCGDCGYRTAKKSHLSQHTRTHTGEKPYKCDQCVFSAAGKSALNQHL 1014
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 69 EHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKE 128
E N +R + + C C++ + NH + H GDK +KC C Y A K
Sbjct: 94 ERKSNLSLHMRTHTGEKPYKCDQCEFSAAWKSTLDNHLVKHTGDKPYKCDQCDYSAALKS 153
Query: 129 KLQFHVK 135
L H++
Sbjct: 154 YLDRHLR 160
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 41 NMSFLNSVIPQSCKHCK---NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C+ + S+ N L++H+ + P + C CDY
Sbjct: 102 HMRTHTGEKPYKCDQCEFSAAWKSTLDNHLVKHTGDKP-----------YKCDQCDYSAA 150
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ + H IH +K +KC C Y Q+ L H++
Sbjct: 151 LKSYLDRHLRIHAVEKPYKCGECGYRTAQRSALSRHMR 188
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H G+K +KC C + A K L H+
Sbjct: 84 YMCGVCGYRTERKSNLSLHMRTHTGEKPYKCDQCEFSAAWKSTLDNHL 131
>gi|260835614|ref|XP_002612803.1| hypothetical protein BRAFLDRAFT_233149 [Branchiostoma floridae]
gi|229298183|gb|EEN68812.1| hypothetical protein BRAFLDRAFT_233149 [Branchiostoma floridae]
Length = 243
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T N+ H H +K +KC C Y A QK L +H+ KH+
Sbjct: 128 YMCGECGYRTAQRSNLSRHMRTHTEEKPYKCDQCDYSASQKANLDYHIATKHT 180
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T+ + H IH G+K +KC C Y A +K L H+
Sbjct: 16 YMCGECGYRTVKKDTLSRHMRIHTGEKPYKCDQCDYSAARKSSLNRHL 63
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 22/47 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
F+C C Y T + H H G+K +KC C Y A QK L H
Sbjct: 72 FMCGECGYRTDDKTKLSKHMRTHTGEKPYKCDRCGYSAAQKANLVSH 118
>gi|426241569|ref|XP_004014662.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 335 [Ovis
aries]
Length = 1265
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 573 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 626
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY--------GAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F+C LC GA L+FH++ HS
Sbjct: 992 CSQCSFASKNKKDLRRHMLTHTNEKPFECQLCGQRXGWAKPAGAAGPGHLKFHIQRLHS 1050
>gi|410953608|ref|XP_003983462.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 335 [Felis
catus]
Length = 1342
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 622 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 675
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 611 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 655
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 656 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 709
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1077 CSQCSFASKNKKDLRRHMLTHTNEKPFACHLCGQRFNRNGHLKFHIQRLHS 1127
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
DP +K C+ C Y + +++ H H+G K +KC CSY + ++ + H
Sbjct: 493 DPQLFK--CLQCSYRSRRWSSLKEHMFNHVGSKPYKCGECSYASVYRKDVARH 543
>gi|403290844|ref|XP_003936517.1| PREDICTED: zinc finger protein 335 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1345
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 624 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 677
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 613 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 657
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 658 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 711
Score = 38.5 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1080 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1130
>gi|403290842|ref|XP_003936516.1| PREDICTED: zinc finger protein 335 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1344
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 623 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 676
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 612 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 656
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 657 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 710
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1079 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1129
>gi|260787236|ref|XP_002588660.1| hypothetical protein BRAFLDRAFT_240758 [Branchiostoma floridae]
gi|229273827|gb|EEN44671.1| hypothetical protein BRAFLDRAFT_240758 [Branchiostoma floridae]
Length = 545
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
F+C C Y T ++ H IH G+K +KC C Y A K+ L HV KH++
Sbjct: 457 FMCEDCGYRTADRSHLSRHIRIHTGEKPYKCDQCDYSAANKDHLDEHVVRKHTS 510
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D +++M+H+ P ++C CDY T ++ H H K +KC C Y
Sbjct: 361 DQHVMMKHTGEKP-----------YMCENCDYRTANKSHLALHVRKHF--KPYKCDQCDY 407
Query: 123 GAYQKEKLQFHVKNKHSTK 141
A ++++L HV KH+T+
Sbjct: 408 CAARQDELDRHVVTKHTTE 426
>gi|261289255|ref|XP_002603070.1| hypothetical protein BRAFLDRAFT_198724 [Branchiostoma floridae]
gi|229288387|gb|EEN59082.1| hypothetical protein BRAFLDRAFT_198724 [Branchiostoma floridae]
Length = 226
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C+ T+ NL +R + + C CDY + ++ H H
Sbjct: 141 PYVCEECEYRTADKGNLSRH--------IRKHTGEKPYKCDLCDYSAALKYSLDCHMTTH 192
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
GDK +KC C+Y A +K+ L HV+ KH+
Sbjct: 193 TGDKPYKCDQCNYSAARKDTLGQHVRVKHT 222
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C+Y T N+ H H G+K +KC C Y A +K KL H+
Sbjct: 56 YMCGECEYRTADKGNLSKHVRKHTGEKPYKCDQCDYSAIRKAKLDRHI 103
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL-I 108
P C C+ + ++D L +H VR + + C CDY I + H + +
Sbjct: 55 PYMCGECE-YRTADKGNLSKH-------VRKHTGEKPYKCDQCDYSAIRKAKLDRHIMAM 106
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G+K +KC C Y A QK ++ H+ KH+
Sbjct: 107 HRGEKPYKCDQCDYSAAQKIEMDRHILRKHT 137
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + T+ + H H G+ FKC LC Y K L+ H+ KH+
Sbjct: 1 CDFCGFKTVSKSQLITHVRKHTGENPFKCDLCDYSTAHKASLKRHIFTKHT 51
>gi|260809011|ref|XP_002599300.1| hypothetical protein BRAFLDRAFT_113547 [Branchiostoma floridae]
gi|229284577|gb|EEN55312.1| hypothetical protein BRAFLDRAFT_113547 [Branchiostoma floridae]
Length = 681
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
++C C Y T I N+ H +H G+K FKC C Y A++K L H K KH++
Sbjct: 593 YVCWECGYRTAIRSNLTRHIRVHTGEKPFKCEECDYCAFKKSSLDKH-KAKHAS 645
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y ++ H H G K +KC C Y A QK L FH+ ++HS
Sbjct: 84 YMCGECGYRAAKKSHLSQHMKAHTGQKPYKCDQCDYSAAQKISLDFHIASRHS 136
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C+HC ++ +L + +H+ P ++C C + T
Sbjct: 499 HMKTHTGKKPHKCEHCDYSAAAKASLDIHMAKHTGEKP-----------YLCGECGFRTA 547
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H IH +K FKC C Y A QK L H+ N
Sbjct: 548 KKGDLSRHRRIHAEEKPFKCDQCDYSAAQKYNLDIHLAN 586
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + +L L +H+EN FICV C + T + H
Sbjct: 336 PYKCDQCDYSAAQKCHLYQHLAKHAEN-------SDTDKSFICVECGFTTRHRYALTRHK 388
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFH 133
H G+K +KC C Y A QK+ L H
Sbjct: 389 RTHTGEKPYKCDQCDYSAQQKDSLDMH 415
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQK----EKLQFHVKNKHSTK 141
++C C Y T N+ H ++H G+K +KC C Y A QK + L H +N + K
Sbjct: 309 YMCGECGYRTAWKSNLSRHMVVHTGEKPYKCDQCDYSAAQKCHLYQHLAKHAENSDTDK 367
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C HC TSS L VR + + C CDY + + H H G+
Sbjct: 30 CNHCDYSTSSKFQLDRH--------VRKHTGEKPYKCDQCDYSAALKTTLNQHLAKHTGE 81
Query: 113 KQFKCCLCSYGAYQKEKLQFHVK 135
K + C C Y A +K L H+K
Sbjct: 82 KPYMCGECGYRAAKKSHLSQHMK 104
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T Q++ H H G K +KC LC Y A QK L H+
Sbjct: 425 YMCGECGYRTRHRQSLYLHKRTHTGVKPYKCNLCDYSAAQKAALNSHM 472
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T + N++NH H+G K +KC C + + K L H+
Sbjct: 142 MCGKCGYSTHLKSNLKNHMRTHMGVKPYKCDQCDFSSAHKCSLDKHL 188
>gi|260823082|ref|XP_002604012.1| hypothetical protein BRAFLDRAFT_71699 [Branchiostoma floridae]
gi|229289337|gb|EEN60023.1| hypothetical protein BRAFLDRAFT_71699 [Branchiostoma floridae]
Length = 687
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+Y ++C C+Y T+ N +H H G+K +KC C Y A K L H+ +H+
Sbjct: 343 EYPYMCGKCEYRTVRKSNFSDHMRTHTGEKPYKCDQCDYSAILKSYLNKHISRQHN 398
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 54 KHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDK 113
KH ++ D ++ +HS P ++C C Y T S NH H G+K
Sbjct: 268 KHLAKKSTLDKHIAAKHSGGKP-----------YMCGECGYSTTYSSTFSNHMRTHTGEK 316
Query: 114 QFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
FKC C Y A +K L H K KH+ +
Sbjct: 317 PFKCDQCDYSASKKCYLDQH-KTKHTGE 343
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + + H H+GDK + C C Y K +L H++
Sbjct: 487 YKCDQCDYSAALKSRLNEHIARHIGDKPYMCGECGYRGANKSRLAIHMR 535
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C + T ++ H H G+K +KC C Y A QK +L H KH+ +
Sbjct: 629 YMCGECGFRTGRKSDLFRHMRTHTGEKTYKCDQCDYSAAQKTRLNQHHIAKHTGE 683
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
++C C Y ++ H H G+K FKC C + A QK L H+ K
Sbjct: 223 YMCGECGYRAAQKHHLSRHMRTHTGEKPFKCDQCDFSAAQKSTLDKHLAKK 273
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T+ + H H G+K +KC C Y A K +L H+
Sbjct: 459 YMCGECGYRTVKKSRLSIHMRTHTGEKPYKCDQCDYSAALKSRLNEHI 506
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
V+ ++C C + ++ H H G+K FKC C Y A + L HV KHS
Sbjct: 114 VEKPYMCGECGHRAPEMTSLLLHMRTHTGEKTFKCDQCDYSASLESNLNRHVSEKHS 170
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H H GDK +KC C Y A +K L H+
Sbjct: 515 YMCGECGYRGANKSRLAIHMRTHTGDKPYKCDQCDYSAAEKSALTRHL 562
>gi|417406358|gb|JAA49840.1| Putative zn finger [Desmodus rotundus]
Length = 1342
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 620 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 673
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 609 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 653
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 654 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 707
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ H+
Sbjct: 1077 CSQCSFASKNKKDLRRHVLTHTNEKPFSCHLCGQRFNRNGHLKFHIQRLHN 1127
>gi|297259684|ref|XP_001104942.2| PREDICTED: zinc finger protein 335-like isoform 1 [Macaca mulatta]
Length = 1191
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 469 RFKCEFCEFLCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 522
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 458 LLTHIQAVANRRF-------KCEFCE-FLCEDKKALLNHQLS---HVSDKPFK----CSF 502
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 503 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 556
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 926 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 976
>gi|260832596|ref|XP_002611243.1| hypothetical protein BRAFLDRAFT_71202 [Branchiostoma floridae]
gi|229296614|gb|EEN67253.1| hypothetical protein BRAFLDRAFT_71202 [Branchiostoma floridae]
Length = 286
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C +++ NL + H+ P ++C CDY T + + H
Sbjct: 149 PYKCDQCDYASATKCNLDQHMARHTGEKP-----------YMCGECDYRTAVKLRLSQHL 197
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K FKC C Y A QK L+ H+
Sbjct: 198 RTHTGEKPFKCAQCDYSATQKGSLKQHM 225
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F+C C Y T ++ H H G+K +KC LC Y A QK L+ H+
Sbjct: 9 RFVCETCGYRTSDKSSLIVHIRRHTGEKPYKCDLCDYSATQKGSLKQHM 57
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C T+ +L + +H+ N P +IC C Y T
Sbjct: 84 HMRRHTGEKPYKCDQCDYSTAEKSDLVRHMAKHTGNKP-----------YICGKCGYRTA 132
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ ++ H H G+K +KC C Y + K L H+
Sbjct: 133 VRSHLTGHMRKHTGEKPYKCDQCDYASATKCNLDQHM 169
>gi|260823064|ref|XP_002604003.1| hypothetical protein BRAFLDRAFT_71708 [Branchiostoma floridae]
gi|229289328|gb|EEN60014.1| hypothetical protein BRAFLDRAFT_71708 [Branchiostoma floridae]
Length = 529
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y ++ H H G+K +KC C Y A Q+ L +H+ KH+
Sbjct: 43 FVCGECGYRAAYRSHISQHMRTHTGEKPYKCHHCDYAAAQQANLAYHIATKHT 95
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T N+ H H G+K +KC C + A QK L FH++
Sbjct: 380 YMCAECGYRTARKSNLYKHMRTHSGEKPYKCDQCDFSAAQKSNLDFHLR 428
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 15/105 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLL----MEHSENCPCMVRPDPVKYKFICVACDYFT 96
+M P C HC + NL +H+ P ++C C Y
Sbjct: 61 HMRTHTGEKPYKCHHCDYAAAQQANLAYHIATKHTGEKP-----------YMCGECGYRA 109
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H H G+K +KC C Y A Q L H+ KHS K
Sbjct: 110 TKMFDLARHMRTHTGEKPYKCDQCDYSAAQVANLDQHIAAKHSEK 154
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ +C C Y T + H H G++ +KC C Y A +K+ L+ HV N
Sbjct: 211 RHVCDVCGYKTPNKSGLSRHMRTHTGERPYKCDHCHYSAARKDDLKKHVAN 261
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 40 PNMSFLNSVI-------PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVAC 92
PN S L+ + P C HC +++++ + L +H N P F+CV C
Sbjct: 222 PNKSGLSRHMRTHTGERPYKCDHC-HYSAARKDDLKKHVAN---HTGDKP----FLCVEC 273
Query: 93 DYF----TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
Y +I+S +MR HT +K +KC C Y A QK L H+
Sbjct: 274 GYRACRRSILSVHMRKHT----AEKAYKCEQCDYSAAQKRYLDRHL 315
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ V L +H + + ++C C Y T
Sbjct: 118 HMRTHTGEKPYKCDQC-DYSAAQVANLDQH-------IAAKHSEKPYMCGECGYRTAYKS 169
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K +KC C Y A QK H+
Sbjct: 170 YLSQHMRTHTGEKPYKCDQCDYSAAQKSAFHRHL 203
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C + T + H H G+K +KC C Y A QK L H+
Sbjct: 324 FMCDECGFRTPCKSTLTRHMRSHSGEKPYKCDQCDYSAAQKSDLDIHL 371
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 17/108 (15%)
Query: 27 SDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYK 86
SD+D+ +++ P C C T+ NL +R +
Sbjct: 365 SDLDI---------HLARHTGEKPYMCAECGYRTARKSNLYKH--------MRTHSGEKP 407
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CD+ N+ H H G+K +KC C Y A K L H+
Sbjct: 408 YKCDQCDFSAAQKSNLDFHLRKHTGEKPYKCDQCDYSAAHKRTLDRHL 455
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M + P C C + NL L +H+ P + C CDY
Sbjct: 398 HMRTHSGEKPYKCDQCDFSAAQKSNLDFHLRKHTGEKP-----------YKCDQCDYSAA 446
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ + H + H GDK + C +C + +K L H++
Sbjct: 447 HKRTLDRHLMTHTGDKPYMCGVCGHRTARKSDLFRHIRT 485
>gi|431894454|gb|ELK04254.1| Zinc finger protein 335 [Pteropus alecto]
Length = 1339
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 617 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 670
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 606 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 650
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 651 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 704
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1074 CSQCSFASKNKKDLRRHMLTHTNEKPFSCHLCGQRFNRNGHLKFHIQRLHS 1124
>gi|395829495|ref|XP_003787893.1| PREDICTED: transcriptional repressor CTCFL [Otolemur garnettii]
Length = 741
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CCLCSY + KL+ H++ K
Sbjct: 354 FKCSMCKYASVEASKLKRHIRSHTGERPFQCCLCSYASKDTYKLKRHMRTHSGEK 408
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H +R + F C C Y + + ++ H H
Sbjct: 353 PFKCSMCK-YASVEASKLKRH-------IRSHTGERPFQCCLCSYASKDTYKLKRHMRTH 404
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ HV KHS V
Sbjct: 405 SGEKPYECHICHARFTQSGTMKIHVLQKHSENV 437
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
+F C C Y ++MR H H G+K F C C+ QK+ L H K H +
Sbjct: 497 RFKCEHCSYACKQERHMRVHLRTHTGEKPFTCLACNKCFRQKQLLNVHFKKYHDS 551
>gi|149733724|ref|XP_001503431.1| PREDICTED: zinc finger protein 335 [Equus caballus]
Length = 1335
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 613 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 666
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 602 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 646
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 647 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 700
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1070 CSQCSFASKNKKDLRRHMLTHTNEKPFACHLCGQRFNRNGHLKFHIQRLHS 1120
>gi|395829123|ref|XP_003787710.1| PREDICTED: zinc finger protein 335 isoform 1 [Otolemur garnettii]
Length = 1345
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 625 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 678
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 614 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 658
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 659 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 712
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1082 CSQCSFASKNKKDLRRHVLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1132
>gi|260823004|ref|XP_002603973.1| hypothetical protein BRAFLDRAFT_71739 [Branchiostoma floridae]
gi|229289298|gb|EEN59984.1| hypothetical protein BRAFLDRAFT_71739 [Branchiostoma floridae]
Length = 909
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++T++ + L H + + K ++C C Y T
Sbjct: 337 HMRTHTGERPYKCGQC-DYTAAGKSALDRH------LAKHSGAK-PYMCGECGYRTANKA 388
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
N+ H H G+K +KC C Y A QK L H+ KH+
Sbjct: 389 NLSAHMRTHTGEKPYKCDQCDYSAAQKVTLDDHIAAKHT 427
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T ++ HT H G+K +KC C Y A +K L H++
Sbjct: 179 YMCGECGYRTAEKSHLSRHTKTHTGEKPYKCDQCDYSAAEKSSLDVHLR 227
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H H GDK +KC C Y A +K L+ H+
Sbjct: 460 YMCGECGYRATRKSQLSRHMRTHTGDKPYKCDQCDYSAARKSALKLHL 507
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY ++ H IH GDK +KC C Y A K L+ HV
Sbjct: 207 YKCDQCDYSAAEKSSLDVHLRIHSGDKPYKCDQCDYSAAHKSSLEQHV 254
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T + H H GDK + C C Y A +K +L H++
Sbjct: 432 YMCGECGYRTATKSTLGRHLTKHTGDKPYMCGECGYRATRKSQLSRHMR 480
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T + H H G+K +KC C Y A K L HV+
Sbjct: 744 YMCEKCGYRTADRSTLSRHMRTHTGEKPYKCDQCDYAAADKSTLYKHVR 792
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y ++ H IH G+K + C LCSY A +K L H+
Sbjct: 856 YTCGDCGYKAARKHHLSEHMKIHTGEKPYSCHLCSYSAARKSTLSKHL 903
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K KC C Y A +K L H+
Sbjct: 688 YMCGECGYRTTFKSDLSRHMRTHTGEKSHKCDQCDYSAARKSTLDDHL 735
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C + ++D + L H +R + + C CDY + H H
Sbjct: 743 PYMCEKC-GYRTADRSTLSRH-------MRTHTGEKPYKCDQCDYAAADKSTLYKHVRKH 794
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
GDK + C C + A +K+ L H++
Sbjct: 795 TGDKPYMCGECGFRASRKDILSVHMR 820
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+C C Y T ++ H H G+K KC C Y A +K L H++
Sbjct: 633 MCGECGYRTTFKSDLSRHMRTHTGEKPHKCDQCDYSAARKSSLGKHLQ 680
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T ++ H H G+K +KC C Y A +K H+
Sbjct: 263 YTCGECGYRTAHKSDLSKHMRTHTGEKPYKCDQCDYSAARKSTFDQHL 310
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++ ++D + L +H VR ++C C +
Sbjct: 762 HMRTHTGEKPYKCDQC-DYAAADKSTLYKH-------VRKHTGDKPYMCGECGFRASRKD 813
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H H G+K +KC C Y A Q+ L H+ KHS
Sbjct: 814 ILSVHMRTHTGEKPYKCDQCDYSAPQRASLDKHLA-KHS 851
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C F +S ++L H +R + + C CDY ++ H H
Sbjct: 799 PYMCGEC-GFRASRKDILSVH-------MRTHTGEKPYKCDQCDYSAPQRASLDKHLAKH 850
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K + C C Y A +K L H+K
Sbjct: 851 SGEKPYTCGDCGYKAARKHHLSEHMK 876
>gi|260802021|ref|XP_002595892.1| hypothetical protein BRAFLDRAFT_232236 [Branchiostoma floridae]
gi|229281143|gb|EEN51904.1| hypothetical protein BRAFLDRAFT_232236 [Branchiostoma floridae]
Length = 561
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 53 CKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
CK C TS +NL + +H+ P + C CDY I N+ H + H
Sbjct: 68 CKQCDFSTSWQINLQRHMAQHTGEKP-----------YKCDQCDYSAIQKSNLDKHLVKH 116
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K F C LC YG K L H++
Sbjct: 117 TGEKPFMCELCGYGTAHKTHLARHMR 142
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C HC +F++S L +H+ +P + C CDY +
Sbjct: 140 HMRKHTGEKPYCCDHC-DFSTSWKVTLDQHTATKHTGEKP------YKCDQCDYSAVRKG 192
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
N+ H H G+K +KC +C Y K L H++ S K
Sbjct: 193 NLDKHLANHTGEKPYKCGVCGYRTAYKAHLLRHLRKHASEK 233
>gi|109469192|ref|XP_342579.3| PREDICTED: zinc finger protein 335 [Rattus norvegicus]
gi|109471322|ref|XP_001070873.1| PREDICTED: zinc finger protein 335 isoform 2 [Rattus norvegicus]
gi|408407559|sp|G3V893.1|ZN335_RAT RecName: Full=Zinc finger protein 335; AltName:
Full=NRC-interacting factor 1; Short=NIF-1
gi|149042907|gb|EDL96481.1| zinc finger protein 335 [Rattus norvegicus]
Length = 1336
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 620 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 673
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 609 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 653
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H+ ++
Sbjct: 654 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHANSFEE 707
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C +C + L+FH++ HS
Sbjct: 1076 CNQCSFASKNKKDLRRHMLTHTNEKPFSCHVCGQRFNRNGHLKFHIQRLHS 1126
>gi|326436294|gb|EGD81864.1| hypothetical protein PTSG_13191 [Salpingoeca sp. ATCC 50818]
Length = 539
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 26/52 (50%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
K + C C Y T S N + H H G+K FKC LC+Y A L HVK
Sbjct: 454 KKVYECDKCSYTTTRSYNFKGHLRTHAGEKPFKCELCNYSAASHSNLIRHVK 505
>gi|443696351|gb|ELT97070.1| hypothetical protein CAPTEDRAFT_181403 [Capitella teleta]
Length = 145
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C CDY T+ ++R H H G+K +KC C Y Q L+ H++ H
Sbjct: 81 YKCDKCDYATVERSHLRVHMRTHTGEKPYKCEYCDYATAQNSTLKIHLRRHH 132
>gi|260823116|ref|XP_002604029.1| hypothetical protein BRAFLDRAFT_71681 [Branchiostoma floridae]
gi|229289354|gb|EEN60040.1| hypothetical protein BRAFLDRAFT_71681 [Branchiostoma floridae]
Length = 270
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ HT H GDK +KC C Y A QK L H+
Sbjct: 116 YMCGECGYRTERKSNLSRHTRTHTGDKPYKCDQCDYSAAQKYDLDKHL 163
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T ++ H IH G+K + C C Y +K L H +
Sbjct: 88 YMCGVCGYSTAKKSHLAEHLRIHTGEKPYMCGECGYRTERKSNLSRHTR 136
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T ++ H IH G+K +KC C Y A +K L H+
Sbjct: 172 YMCGECGFRTANRSHLSRHMKIHTGEKPYKCDQCDYSAARKCSLDQHL 219
>gi|390348418|ref|XP_003727001.1| PREDICTED: zinc finger protein 184-like [Strongylocentrotus
purpuratus]
Length = 801
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
CK C N+ S+ + L H M R VK F C CDY I M H H G
Sbjct: 502 CKQC-NYVSAYKSSLTRH------MARHSLVK-PFKCGHCDYSAITMTQMHTHIAKHTGI 553
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHS 139
KQ+ C LCSY K+ L H+ +KHS
Sbjct: 554 KQYSCDLCSYSTANKQHLTNHM-SKHS 579
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL--CSYGAYQKEKLQFHVKNKHSTKVK 143
++ C CDY T + +++H IH GD FKC C++ K L HV +HS +++
Sbjct: 359 RYKCTECDYETTYNHCLKSHMHIHNGDNPFKCTRPGCTFSTNSKSNLNSHV-TRHSKRIQ 417
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
DP + F C CDY ++ +++ H+ H +KQ++C C + + + L H+ +KH
Sbjct: 270 DPSEL-FKCPECDYVSMYKYDLQTHSKKHNPEKQYRCFHCDFTSIYRHSLLHHISSKH 326
>gi|260819949|ref|XP_002605298.1| hypothetical protein BRAFLDRAFT_89066 [Branchiostoma floridae]
gi|229290630|gb|EEN61308.1| hypothetical protein BRAFLDRAFT_89066 [Branchiostoma floridae]
Length = 649
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +F + D L H + ++ + C CDY +++R H +H
Sbjct: 60 PHKCPTC-DFAAVDKTRLKYH-------LATHSIERPYSCEICDYSAKTKESLRKHMFVH 111
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+K +KC CSY + +K L+ H+ KH+ +++
Sbjct: 112 ADEKPYKCDACSYSSTEKANLKRHIIAKHTGELE 145
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
IC C Y T + N+R+H H G++ +KC C Y K L+ H+ KHS
Sbjct: 5 ICPHCKYCTGNAANLRDHIRTHTGERPYKCQHCDYSTTYKAHLKRHIAAKHS 56
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 87 FICVACDY----FTIISQNMRNHT---LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C +C Y + + Q+M HT IH G+K ++C C Y A QK +L+ H+ +H
Sbjct: 421 YKCDSCGYGAARMSTLKQHMAKHTDHIRIHTGEKPYQCQYCDYSASQKSRLKPHIAARH 479
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
+ C C Y+T + +++ H H G++ +KC +C Y + L+ H+ KH+ ++
Sbjct: 267 YKCDICGYYTARTSHLKRHMAKHTGERPYKCDICGYYTARTSNLKRHM-AKHTARM 321
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM------VRPDPVKYKFICVACDY 94
+M+ P C C +T+ NL +++ M + + + C +C Y
Sbjct: 285 HMAKHTGERPYKCDICGYYTARTSNLKRHMAKHTARMSTLKQHMAKHTGERPYKCDSCGY 344
Query: 95 FTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G++ +KC C YGA + L+ H+
Sbjct: 345 GAARMSTLKQHMAKHTGERPYKCDSCGYGAARMSTLKRHM 384
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+ C +C Y ++ H H G++ +KC C YGA + L+ H+ KH+ ++
Sbjct: 393 YKCDSCGYGAARMSTLKQHMAKHTGERPYKCDSCGYGAARMSTLKQHM-AKHTDHIR 448
>gi|260823040|ref|XP_002603991.1| hypothetical protein BRAFLDRAFT_71721 [Branchiostoma floridae]
gi|229289316|gb|EEN60002.1| hypothetical protein BRAFLDRAFT_71721 [Branchiostoma floridae]
Length = 364
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C HC +++++D + L++H +R + ++C C + T
Sbjct: 187 HMRTHTGEKPYKCDHC-DYSAADKSTLVKH-------IRKHTGEKPYMCGECGFRTADRS 238
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G++++KC C Y A +K L H+
Sbjct: 239 TLSRHMRTHTGERRYKCDQCDYSAARKYDLDKHL 272
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+IC C+Y T ++ H IH G+K KC C Y A K L H+ KH+
Sbjct: 56 YICGECEYKTTNKSHLSRHMKIHTGEKPHKCDQCDYSASHKSNLDRHIAAKHT 108
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 15/119 (12%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
C +C+ Y +D + H + P C C F ++D + L H
Sbjct: 199 CDHCD-YSAADKSTLVKH------IRKHTGEKPYMCGEC-GFRTADRSTLSRH------- 243
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+R + ++ C CDY ++ H H G+K F C C + +K L H++
Sbjct: 244 MRTHTGERRYKCDQCDYSAARKYDLDKHLATHTGEKPFMCGECGHRTARKSTLYKHMRT 302
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSS-----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
+M P C C ++++S D ++ +H+ + P ++C C +
Sbjct: 74 HMKIHTGEKPHKCDQC-DYSASHKSNLDRHIAAKHTGDKP-----------YMCEVCGFR 121
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
T + H H G+K +KC C Y A K L H+
Sbjct: 122 TAYRSELSRHMRTHTGEKPYKCDQCDYSAAGKSALNQHL 160
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y + + H H G+K +KC C Y A K L H++
Sbjct: 169 YLCEECGYSATRNSYLSQHMRTHTGEKPYKCDHCDYSAADKSTLVKHIR 217
>gi|73992538|ref|XP_543028.2| PREDICTED: zinc finger protein 335 [Canis lupus familiaris]
Length = 1342
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 620 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 673
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 609 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 653
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 654 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 707
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1077 CSQCSFASKNKKDLRRHMLTHTNEKPFACHLCGQRFNRNGHLKFHIQRLHS 1127
>gi|242019398|ref|XP_002430148.1| zinc finger protein, putative [Pediculus humanus corporis]
gi|212515239|gb|EEB17410.1| zinc finger protein, putative [Pediculus humanus corporis]
Length = 481
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++ C CDY ++ S ++ H +H G++ FKC LCSY A +L H++
Sbjct: 156 RYKCTKCDYASVDSGSLIKHLRVHNGERPFKCQLCSYRARDSSQLTVHLR 205
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 91 ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C Y T++ +++ H+ +H G++ FKC LC + +KL H +
Sbjct: 105 GCLYKTLLRKDIERHSRVHTGERPFKCYLCDKAFNRTDKLLLHQR 149
>gi|114682319|ref|XP_001160317.1| PREDICTED: zinc finger protein 335 isoform 2 [Pan troglodytes]
Length = 1338
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 616 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 669
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 605 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 649
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 650 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 703
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1073 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1123
>gi|410218868|gb|JAA06653.1| zinc finger protein 335 [Pan troglodytes]
gi|410249992|gb|JAA12963.1| zinc finger protein 335 [Pan troglodytes]
gi|410294098|gb|JAA25649.1| zinc finger protein 335 [Pan troglodytes]
gi|410331203|gb|JAA34548.1| zinc finger protein 335 [Pan troglodytes]
Length = 1342
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 620 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 673
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 609 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 653
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 654 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 707
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1077 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1127
>gi|397511355|ref|XP_003826042.1| PREDICTED: zinc finger protein 335 isoform 1 [Pan paniscus]
Length = 1342
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 620 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 673
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 609 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 653
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 654 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 707
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1077 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1127
>gi|301785383|ref|XP_002928102.1| PREDICTED: zinc finger protein 335-like [Ailuropoda melanoleuca]
gi|281346394|gb|EFB21978.1| hypothetical protein PANDA_018018 [Ailuropoda melanoleuca]
Length = 1349
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 626 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 679
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 615 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 659
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 660 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 713
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1084 CSQCSFASKNKKDLRRHMLTHTNEKPFACHLCGQRFNRNGHLKFHIQRLHS 1134
>gi|260806380|ref|XP_002598062.1| hypothetical protein BRAFLDRAFT_85723 [Branchiostoma floridae]
gi|229283333|gb|EEN54074.1| hypothetical protein BRAFLDRAFT_85723 [Branchiostoma floridae]
Length = 534
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 34/78 (43%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K T S +L+ E N V + V +IC C Y T ++ H H G+K FK
Sbjct: 335 KQVTPSSTSLVQESKGNMGRNVVHNSVAKPYICEECGYRTAKKSHLSRHIKTHTGEKPFK 394
Query: 117 CCLCSYGAYQKEKLQFHV 134
C C Y A K L H+
Sbjct: 395 CGECDYSAADKYTLDKHL 412
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C CDY + H H G+K +KC C + A QK + +H+ KH
Sbjct: 393 FKCGECDYSAADKYTLDKHLAKHTGEKPYKCDQCDFSAIQKSHINYHIATKHG 445
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY QN+ H H G+K F C C Y A QK L H++
Sbjct: 478 YKCDQCDYSAAQKQNLDQHRRKHTGEKPFMCGECGYRAAQKADLSKHMR 526
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F+C C Y N+ H H G+K +KC C + A Q KL H++
Sbjct: 55 FMCGECGYRAADRSNLSRHMRTHTGEKPYKCGECGFRAVQWSKLSRHMR 103
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T+ + H H G+K +KC C Y A QK+ L H + KH+
Sbjct: 450 YMCGECGYRTVEKSTLSVHLRTHTGEKPYKCDQCDYSAAQKQNLDQH-RRKHT 501
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H H GDK + C C Y A Q+ L H++
Sbjct: 168 YKCDQCDYSAAQRINLVTHQATHTGDKPYMCGECGYRAAQRSALSLHMR 216
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 14/102 (13%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLME---HSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + +NL+ H+ + P ++C C Y
Sbjct: 158 HMRTHTGEKPYKCDQCDYSAAQRINLVTHQATHTGDKP-----------YMCGECGYRAA 206
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H H G+K +KC C Y A QK L HV HS
Sbjct: 207 QRSALSLHMRTHTGEKPYKCDHCDYSAAQKGTLDKHVAAAHS 248
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++D + L H +R + + C C + + + H H
Sbjct: 54 PFMCGEC-GYRAADRSNLSRH-------MRTHTGEKPYKCGECGFRAVQWSKLSRHMRTH 105
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y A +K +L H+ KH
Sbjct: 106 TGEKPYKCDQCDYSAIRKYRLDNHIATKHG 135
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T+ + H H G+K +KC C Y A Q+ L H
Sbjct: 140 YMCGECGYRTVEKSTLSVHMRTHTGEKPYKCDQCDYSAAQRINLVTH 186
>gi|260835608|ref|XP_002612800.1| hypothetical protein BRAFLDRAFT_147027 [Branchiostoma floridae]
gi|229298180|gb|EEN68809.1| hypothetical protein BRAFLDRAFT_147027 [Branchiostoma floridae]
Length = 275
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 14/90 (15%)
Query: 53 CKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
C C + TS NL L H+ + P ++C C Y + + H H
Sbjct: 3 CDQCDHSTSEKPNLNSHLATHTRDKP-----------YMCGECGYRAVSRSYISQHMRTH 51
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y A QK L HV+ +HS
Sbjct: 52 TGEKPYKCDQCDYSATQKGNLSRHVQAQHS 81
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQN 101
M P C C T+ NL H + +P ++C C + T N
Sbjct: 160 MRTHTGAKPYKCDQCDYSTAQKCNL-SRHVKTNHSGEKP------YMCGECGFRTTQKSN 212
Query: 102 MRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H H G+K +KC C Y A QK L+ H+ KH+
Sbjct: 213 LVQHMRTHTGEKPYKCDQCDYSATQKSNLRNHIAAKHT 250
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI- 108
P C C T+ NL+ +R + + C CDY N+RNH
Sbjct: 197 PYMCGECGFRTTQKSNLVQH--------MRTHTGEKPYKCDQCDYSATQKSNLRNHIAAK 248
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K +KC C Y A QK L HV+
Sbjct: 249 HTGEKPYKCNKCDYSATQKGNLSKHVE 275
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T + H H G K +KC C Y QK L HVK HS
Sbjct: 141 YMCGECGFRTAHRSYISLHMRTHTGAKPYKCDQCDYSTAQKCNLSRHVKTNHS 193
>gi|426391972|ref|XP_004062337.1| PREDICTED: zinc finger protein 335 isoform 1 [Gorilla gorilla
gorilla]
Length = 1342
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 620 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 673
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 609 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 653
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 654 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 707
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1077 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1127
>gi|11560152|ref|NP_071378.1| zinc finger protein 335 [Homo sapiens]
gi|20141037|sp|Q9H4Z2.1|ZN335_HUMAN RecName: Full=Zinc finger protein 335; AltName:
Full=NRC-interacting factor 1; Short=NIF-1
gi|22901200|gb|AAN09900.1|AF395833_1 zinc-finger/leucine-zipper co-transducer NIF1 [Homo sapiens]
gi|187252519|gb|AAI66679.1| Zinc finger protein 335 [synthetic construct]
Length = 1342
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 620 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 673
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 609 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 653
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 654 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 707
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1077 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1127
>gi|348500426|ref|XP_003437774.1| PREDICTED: zinc finger protein 507-like [Oreochromis niloticus]
Length = 1123
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
Query: 35 HCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPV-------KYKF 87
C+ CP+ S + + +F SSDV +L +E M + V + +
Sbjct: 839 QCKQCPDAFHYKSQLRNHEREHHSF-SSDVEMLTPVTETAATMEETERVTDEEGSPQKMY 897
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C C+Y + +RNH IH DK ++C LC Y L+ H+
Sbjct: 898 KCDVCNYTSSTYVGVRNHRRIHNSDKPYRCSLCGYVCSHPPSLKSHM 944
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C+ ++S + + +H +R + + C C++ + S+++ NH + H
Sbjct: 781 PYRCRLCR-YSSGNKGYIKQH-------LRVHRQREPYQCPICEHIALDSKDLENHMIHH 832
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ ++C C + K +L+ H + HS
Sbjct: 833 CKSRMYQCKQCPDAFHYKSQLRNHEREHHS 862
>gi|296200600|ref|XP_002747650.1| PREDICTED: zinc finger protein 335 isoform 1 [Callithrix jacchus]
Length = 1345
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 624 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 677
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 613 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 657
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 658 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 711
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1080 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1130
>gi|260782551|ref|XP_002586349.1| hypothetical protein BRAFLDRAFT_108829 [Branchiostoma floridae]
gi|229271453|gb|EEN42360.1| hypothetical protein BRAFLDRAFT_108829 [Branchiostoma floridae]
Length = 980
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T +N+ H IH GDK F C C Y A Q+ L H++
Sbjct: 222 YMCGECGYRTAERRNLYRHMTIHTGDKPFMCGECGYRAAQRSDLSRHMR 270
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ N L +H + + ++C C Y T
Sbjct: 569 HMKIHTGENPYKCDQC-DYSTAHKNSLDQH-------LAKHTGEKPYMCGECWYRTARKS 620
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC LC Y A +K+ L H+
Sbjct: 621 DLVEHMRTHTGEKNYKCDLCDYSAARKQHLDIHL 654
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L +H+ + P ++C C Y
Sbjct: 401 HMRTHTGEKPYKCDQCNYSAAQMSNLYRHLAKHTGDKP-----------YMCGECGYRAT 449
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ NH H G+K +KC C Y A QK L H+
Sbjct: 450 QKGHLSNHMRTHTGEKPYKCDQCDYSAAQKSALDRHL 486
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H IH GDK + C C Y A K L H++
Sbjct: 862 YKCDQCDYSAAKKSNLDQHLAIHTGDKPYMCGECGYRATHKSDLSKHMR 910
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y ++ H H G+K +KC C Y A +K L H+
Sbjct: 250 FMCGECGYRAAQRSDLSRHMRTHTGEKPYKCGQCDYSAARKSTLDRHL 297
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
V+ ++C C Y T +++ H H G+K +KC C+Y A Q L H+
Sbjct: 379 VEKPYMCAECGYRTAKKRHLSEHMRTHTGEKPYKCDQCNYSAAQMSNLYRHL 430
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H IH GDK + C C Y A K L H++
Sbjct: 806 YKCDQCDYSAAKKFNLDQHLAIHTGDKPYMCGECGYRATHKSALSKHMR 854
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T ++ H H G+K +KC C Y A K L +H+
Sbjct: 495 YKCDQCGYRTARKSHLSEHMRTHTGEKPYKCDQCDYSAVAKGNLDYHL 542
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H G+K +KC C Y A Q L H+
Sbjct: 890 YMCGECGYRATHKSDLSKHMRTHTGEKPYKCDQCDYSAAQTSALNRHI 937
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++ + L EH +R + + C CDY + N+ H H
Sbjct: 494 PYKCDQC-GYRTARKSHLSEH-------MRTHTGEKPYKCDQCDYSAVAKGNLDYHLAKH 545
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K + C C Y +K L H+K
Sbjct: 546 TGEKPYMCGECGYRTTRKSHLSKHMK 571
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H H G+K FKC C Y A +K L+ H+
Sbjct: 110 YMCGECGYRAPRESHFYRHMRTHTGEKPFKCAQCDYSAARKFSLEQHL 157
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++ L EH +R + + C C+Y N+ H H
Sbjct: 382 PYMCAEC-GYRTAKKRHLSEH-------MRTHTGEKPYKCDQCNYSAAQMSNLYRHLAKH 433
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
GDK + C C Y A QK L H++
Sbjct: 434 TGDKPYMCGECGYRATQKGHLSNHMR 459
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 59 FTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCC 118
+ ++ + L+EH +R + + C CDY Q++ H H GDK ++C
Sbjct: 614 YRTARKSDLVEH-------MRTHTGEKNYKCDLCDYSAARKQHLDIHLAKHTGDKPYRCG 666
Query: 119 LCSYGAYQKEKLQFHVK 135
C Y +K L H++
Sbjct: 667 ECGYRTSRKGDLSKHMR 683
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G+K +KC C+Y A QK L H+
Sbjct: 37 YMCGECGYRTTHKSYLSRHMRTHTGEKPYKCDQCNYSASQKCNLDQHL 84
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + + H H GDK + C C Y +K L H+K
Sbjct: 918 YKCDQCDYSAAQTSALNRHIAKHTGDKPYMCGECGYRTAEKSHLSEHMK 966
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + H H GDK +KC C Y +K L H++
Sbjct: 467 YKCDQCDYSAAQKSALDRHLAKHTGDKPYKCDQCGYRTARKSHLSEHMR 515
>gi|119596183|gb|EAW75777.1| zinc finger protein 335 [Homo sapiens]
Length = 1342
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 620 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 673
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 609 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 653
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 654 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 707
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1077 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1127
>gi|344279716|ref|XP_003411633.1| PREDICTED: zinc finger protein 335 [Loxodonta africana]
Length = 1465
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 744 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCGFCPYRTFREDFLLSHVAVKHT 797
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F+C LC + L+FH++ HS
Sbjct: 1201 CSQCSFASKNKKDLRRHVLTHTNEKPFECHLCGQRFNRNGHLKFHIQRLHS 1251
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 733 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CGF 777
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 778 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 831
>gi|297707238|ref|XP_002830419.1| PREDICTED: zinc finger protein 335 isoform 1 [Pongo abelii]
Length = 1345
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 625 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 678
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 614 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 658
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 659 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 712
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1080 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1130
>gi|260819188|ref|XP_002604919.1| hypothetical protein BRAFLDRAFT_185156 [Branchiostoma floridae]
gi|229290248|gb|EEN60929.1| hypothetical protein BRAFLDRAFT_185156 [Branchiostoma floridae]
Length = 409
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 14/116 (12%)
Query: 24 YVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPV 83
Y +D H +T N I C + +S + L H+ +CP
Sbjct: 153 YAAADSSSLKKHVRTHTNERPFKCQI---CPYASRNSSQLIVHLRSHTGDCP-------- 201
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C C+ I +++ H H GDK +KC LC Y K L+ HV+N H
Sbjct: 202 ---FHCQLCEAKFKIKSDLKRHMRTHTGDKPYKCDLCDYRCAMKGNLKVHVRNNHG 254
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 23 KYVPSDIDVFIGHCQTC--PN----------MSFLNSVIPQSCKHCKNFTS-SDVNLLME 69
K+ +DI+VF+ H ++C PN +S S +P N T+ S N++
Sbjct: 14 KHQFTDIEVFLAHKRSCTPPNVRVSVESFETLSTAGSTVPTIYLTTTNGTNHSPANVVS- 72
Query: 70 HSENCPCMVRPDPVKYKFIC--VACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQK 127
S P +P V+ KF C C + T ++++ H H G K F C +C ++
Sbjct: 73 -SAKTPARTKP-AVEKKFKCQYEGCSFTTAYNKDLDRHVRSHTGCKPFSCSVCQKAFNRR 130
Query: 128 EKLQFHVK 135
+KL+ H++
Sbjct: 131 DKLKQHLR 138
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C C Y S +++ H H ++ FKC +C Y + +L H+++
Sbjct: 146 YACSRCSYAAADSSSLKKHVRTHTNERPFKCQICPYASRNSSQLIVHLRS 195
>gi|396473715|ref|XP_003839400.1| similar to BTE binding protein 4 [Leptosphaeria maculans JN3]
gi|312215969|emb|CBX95921.1| similar to BTE binding protein 4 [Leptosphaeria maculans JN3]
Length = 587
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 51 QSCKHCKNFTSSDVNLLMEHSENCPCMVR-----PDPVKYKFICVACDYFTIIS--QNMR 103
+S + F DV+ +E++ P V+ DPV K+ C+ D + +N+R
Sbjct: 231 ESYEQSPMFNDLDVDASLEYTGIAPEEVQRYISEQDPVTSKWTCLYLDCGKVFGRRENIR 290
Query: 104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+H HLGD+QFKC C ++ L+ H K
Sbjct: 291 SHVQTHLGDRQFKCNGCGKCFVRQHDLKRHAK 322
>gi|358335181|dbj|GAA53681.1| zinc finger protein 341 [Clonorchis sinensis]
Length = 1327
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 61 SSDVNLLMEHSENCPCMVRPDPVKYK---FICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
S D + +S NCP R PV FIC CD Q H H G+K+FKC
Sbjct: 641 SPDCDRAPPNSRNCP---RARPVSIDGPHFICNRCDRVFASKQACDLHARCHNGEKKFKC 697
Query: 118 CLCSYGAYQKEKLQFHVKNKH 138
LCS Q L+ H H
Sbjct: 698 ALCSVSFVQMNSLKRHTVAIH 718
>gi|358335148|dbj|GAA53639.1| zinc finger protein 407 [Clonorchis sinensis]
Length = 393
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F C CDY S N+R H+ IH G + ++C C + Y + L+ HV
Sbjct: 128 RFPCDYCDYSATTSSNLRRHSRIHAGARPYRCPHCGHRTYSLDALKKHV 176
>gi|260802606|ref|XP_002596183.1| hypothetical protein BRAFLDRAFT_202897 [Branchiostoma floridae]
gi|229281437|gb|EEN52195.1| hypothetical protein BRAFLDRAFT_202897 [Branchiostoma floridae]
Length = 176
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVK--YKFICVACDYFTIISQNMRNHTL 107
P C+ C ++ +S + L H M + PVK KF C CDY + ++ H
Sbjct: 56 PYRCELC-DYAASRRHHLQGH------MAKHAPVKPERKFKCEFCDYAAVRKFHLVRHMT 108
Query: 108 IHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K FKC +C Y +LQ H++
Sbjct: 109 RHTGEKPFKCNMCEYSTVDNSRLQAHIR 136
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y + + NH H G+K ++C LC Y A ++ LQ H+
Sbjct: 29 FMCEECGYMAVTKDLLTNHRRTHSGEKPYRCELCDYAASRRHHLQGHM 76
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
F C C+Y T+ + ++ H H G+K F+C C + +K+ L+ H+ +H
Sbjct: 116 FKCNMCEYSTVDNSRLQAHIRAHTGEKPFRCSTCDFATARKDHLKQHMTCRH 167
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++S ++ H L H G++ F C C Y A K+ L H + K
Sbjct: 1 FQCPHCDYAALVSSHLERHILRHTGNRPFMCEECGYMAVTKDLLTNHRRTHSGEK 55
>gi|260832634|ref|XP_002611262.1| hypothetical protein BRAFLDRAFT_71217 [Branchiostoma floridae]
gi|229296633|gb|EEN67272.1| hypothetical protein BRAFLDRAFT_71217 [Branchiostoma floridae]
Length = 520
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+F CV C Y T N+ H H GDK +KC C Y QK L H N
Sbjct: 243 RFTCVECGYRTAHMSNLSAHMRTHTGDKPYKCDQCDYSTAQKGNLDRHKAN 293
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 32/79 (40%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K FT + H N +R + C CDY T N+ H H G K+F
Sbjct: 242 KRFTCVECGYRTAHMSNLSAHMRTHTGDKPYKCDQCDYSTAQKGNLDRHKANHTGGKRFM 301
Query: 117 CCLCSYGAYQKEKLQFHVK 135
C +C Y A + + H++
Sbjct: 302 CGVCGYRATARSYITIHMR 320
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 82 PVKY----KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
PVK +F+C CD+ + HT H G++ + C C Y A K L FH+
Sbjct: 67 PVKRTRVKRFVCTECDFRAAKKSELLRHTRKHTGEEPYNCDQCDYSAAHKVSLDFHI 123
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY T N+ H H G+K + C C Y A +K L H++
Sbjct: 328 YQCDQCDYSTARKGNLDRHMANHTGEKPYMCGECGYRAAEKYSLTVHMR 376
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H G+K +KC C Y A +K L H+
Sbjct: 468 YMCEECGYRTAHRSNLTAHMRTHTGEKPYKCDQCDYSATKKSYLTKHL 515
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C C Y T N+ H H +K +KC C Y A +K L H+
Sbjct: 132 FRCEDCGYRTAYMSNLTGHVRTHTDEKPYKCDQCDYSAARKGNLDRHM 179
>gi|260823016|ref|XP_002603979.1| hypothetical protein BRAFLDRAFT_71733 [Branchiostoma floridae]
gi|229289304|gb|EEN59990.1| hypothetical protein BRAFLDRAFT_71733 [Branchiostoma floridae]
Length = 581
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ LL +H M D K ++C C Y
Sbjct: 327 HMRTHTGEKPYKCDQC-DYSAAQKGLLDQHR-----MKHTD--KRPYMCGECGYRATQKS 378
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H IH G+K +KC C Y A QK +Q HV
Sbjct: 379 DLVKHMRIHTGEKPYKCDQCDYSAAQKSHMQQHV 412
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H IH GDK +KC C Y A QK L H+
Sbjct: 252 YMCGECGYRVTQKSDLSKHMRIHTGDKPYKCGQCDYSAAQKGHLDQHL 299
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T ++ H H G+K +KC C Y A QK L H++ KHS +
Sbjct: 140 YMCGECGYRTAQKSDLSRHMRTHTGEKLYKCDQCDYSAAQKPNLDRHLR-KHSGE 193
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ L +H +++ + + ++C C Y T
Sbjct: 270 HMRIHTGDKPYKCGQC-DYSAAQKGHLDQH------LIKHNGGEKPYMCGECGYRTAWKS 322
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H H G+K +KC C Y A QK L H + KH+ K
Sbjct: 323 HLFQHMRTHTGEKPYKCDQCDYSAAQKGLLDQH-RMKHTDK 362
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T N+ H H G+K +KC C Y A +K L H++
Sbjct: 84 YMCGECGYRTEKKSNLSQHIRTHTGEKPYKCDQCDYSAARKSSLDKHLQ 132
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y Q++ H H G+K +KC C Y A QK L H+
Sbjct: 497 FMCGECGYRAAQWQHLYRHMRTHTGEKPYKCDQCDYSAAQKLTLDKHL 544
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 33/86 (38%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K + + E N +R + + C CDY ++ H IH G+K +
Sbjct: 82 KPYMCGECGYRTEKKSNLSQHIRTHTGEKPYKCDQCDYSAARKSSLDKHLQIHSGEKPYM 141
Query: 117 CCLCSYGAYQKEKLQFHVKNKHSTKV 142
C C Y QK L H++ K+
Sbjct: 142 CGECGYRTAQKSDLSRHMRTHTGEKL 167
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + + H H G+K + C C Y QK L H++
Sbjct: 224 YKCDQCDYSAAVQSTLDKHLAKHTGEKPYMCGECGYRVTQKSDLSKHMR 272
>gi|358339435|dbj|GAA47499.1| histone-lysine N-methyltransferase PRDM9, partial [Clonorchis
sinensis]
Length = 1031
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
++ F C CD +N+++H + H G K F C +C+ G Q+ ++ H++ +KV+
Sbjct: 715 EWPFRCTLCDRGFATERNLKSHQVTHTGKKPFTCPICAKGYAQESSMKTHLRTHQKSKVE 774
>gi|260787851|ref|XP_002588965.1| hypothetical protein BRAFLDRAFT_89156 [Branchiostoma floridae]
gi|229274137|gb|EEN44976.1| hypothetical protein BRAFLDRAFT_89156 [Branchiostoma floridae]
Length = 351
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 20/115 (17%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCM-----------------VRP 80
+M P C C F+++ NL L +H+ + P M +R
Sbjct: 130 HMRTHTGEKPNKCDQCDYFSATKGNLDYHLAKHTGDKPYMCGECGYRATQKCHLSQHIRT 189
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY + N+ H +H GDK + C C Y A +K L H++
Sbjct: 190 HTGGKPFKCDQCDYSSKRKSNLNQHLAMHTGDKPYMCGECGYRAARKSHLSQHMR 244
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 32/79 (40%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K + + H N +R + C CDYF+ N+ H H GDK +
Sbjct: 110 KPYMCGECGYRTTHKSNLAQHMRTHTGEKPNKCDQCDYFSATKGNLDYHLAKHTGDKPYM 169
Query: 117 CCLCSYGAYQKEKLQFHVK 135
C C Y A QK L H++
Sbjct: 170 CGECGYRATQKCHLSQHIR 188
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T+ ++ H H GDK +KC C Y A +K L+ H+
Sbjct: 280 YMCGECGYRTVQKSHLSEHLRTHTGDKPYKCDQCDYSAGKKYHLKRHL 327
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ NH H G+K +KC C Y A QK L H+
Sbjct: 56 YMCGECGYRATQKCHLSNHMRTHTGEKPYKCDQCDYSAAQKSTLNQHL 103
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T + H H GDK +KC C Y A K L H+
Sbjct: 1 MCGECGYRTARKSTLSRHMRTHTGDKPYKCGQCGYSAALKSNLDQHL 47
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+R K F C CD+ ++ H H GDK + C C Y QK L H++
Sbjct: 243 MRTHTGKKPFKCDQCDFSAAQKYSLDRHLAKHTGDKPYMCGECGYRTVQKSHLSEHLR 300
>gi|124517714|ref|NP_950192.2| zinc finger protein 335 [Mus musculus]
gi|408407558|sp|A2A5K6.1|ZN335_MOUSE RecName: Full=Zinc finger protein 335; AltName:
Full=NRC-interacting factor 1; Short=NIF-1
Length = 1337
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 621 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 674
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 610 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 654
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H+ ++
Sbjct: 655 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHANSFEE 708
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C +C + L+FH++ HS
Sbjct: 1077 CNQCSFASKNKKDLRRHMLTHTNEKPFSCHVCGQRFNRNGHLKFHIQRLHS 1127
>gi|74185927|dbj|BAE34126.1| unnamed protein product [Mus musculus]
Length = 1338
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 622 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 675
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 611 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 655
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H+ ++
Sbjct: 656 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHANSFEE 709
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C +C + L+FH++ HS
Sbjct: 1078 CNQCSFASKNKKDLRRHMLTHTNEKPFSCHVCGQRFNRNGHLKFHIQRLHS 1128
>gi|348563907|ref|XP_003467748.1| PREDICTED: zinc finger protein 335-like [Cavia porcellus]
Length = 1340
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 618 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 671
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 607 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 651
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 652 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 705
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1075 CSQCSFASKNKKDLRRHMLTHTNEKPFSCHLCGQRFNRNGHLKFHIQRLHS 1125
>gi|148674487|gb|EDL06434.1| mCG17525, isoform CRA_a [Mus musculus]
Length = 1337
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 621 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 674
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 610 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 654
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H+ ++
Sbjct: 655 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHANSFEE 708
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C +C + L+FH++ HS
Sbjct: 1077 CNQCSFASKNKKDLRRHMLTHTNEKPFSCHVCGQRFNRNGHLKFHIQRLHS 1127
>gi|260811183|ref|XP_002600302.1| hypothetical protein BRAFLDRAFT_118281 [Branchiostoma floridae]
gi|229285588|gb|EEN56314.1| hypothetical protein BRAFLDRAFT_118281 [Branchiostoma floridae]
Length = 1312
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++ L H +R + F C CDY N+ H H
Sbjct: 9 PYKCDQC-DYSAAQKGHLDHH-------MRKHTGEKPFKCDQCDYSAAQKCNLDQHMRKH 60
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC LC Y A +K L H+ KH+
Sbjct: 61 TGEKPYKCDLCDYSAAKKGSLDHHIMRKHT 90
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ V P C C +++++ L +H + VR + + C CDY T
Sbjct: 1215 HMARHTGVKPFKCDQC-DYSAALKGSLAQHKDR---HVRKHTGEKRHKCDQCDYSTARKS 1270
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H H G K + C C Y A QK +L H++N S K
Sbjct: 1271 DLERHMANHAGKKPYMCGKCGYRAAQKTQLSRHMRNHKSEK 1311
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C N+T+ + L +H +R K +C C Y T + H H
Sbjct: 648 PYKCDQC-NYTAPRKSYLDQHK------LRHTGEK-PHLCWECGYRTSNRSGLNKHMRTH 699
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFH 133
G+K +KC C+Y A QK KL H
Sbjct: 700 TGEKPYKCDQCNYCAAQKGKLDRH 723
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 20/112 (17%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCP-----CMVRPDPVKY------------KFIC 89
P C C T+ NL + H+ N P C R D + + C
Sbjct: 894 PYKCDQCDYSTARKSNLNKHMARHAGNKPYVCGECGYRTDTRSHLAQHESKHTDEKPYSC 953
Query: 90 VACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
CD+ T ++ NH ++H G+K + C C + A + L H++ K
Sbjct: 954 DQCDFSTKWELSLNNHMVVHTGEKPYMCKDCGFRASYRSTLTKHMRTHTGKK 1005
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 15/95 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P SC C T ++L ++ H+ + P ++C C Y T + H
Sbjct: 1168 PYSCDQCDFSTKWKLSLHNHMVMHTGDKP-----------YMCGECGYRTAYRSTLTKHM 1216
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
H G K FKC C Y A K L H K++H K
Sbjct: 1217 ARHTGVKPFKCDQCDYSAALKGSLAQH-KDRHVRK 1250
Score = 35.0 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 20/115 (17%)
Query: 30 DVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLL---MEHSENCPCMVRPDPVKYK 86
D F GH Q P C C T+ +L ++H++ P
Sbjct: 1126 DTFAGHTQKQAGEK------PYMCGECGYRTAVRSDLARHKVKHTDEKP----------- 1168
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C CD+ T ++ NH ++H GDK + C C Y + L H+ K
Sbjct: 1169 YSCDQCDFSTKWKLSLHNHMVMHTGDKPYMCGECGYRTAYRSTLTKHMARHTGVK 1223
>gi|187957186|gb|AAI57955.1| Zfp335 protein [Mus musculus]
gi|223462327|gb|AAI51014.1| Zfp335 protein [Mus musculus]
Length = 1338
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 622 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 675
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 611 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 655
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H+ ++
Sbjct: 656 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHANSFEE 709
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C +C + L+FH++ HS
Sbjct: 1078 CNQCSFASKNKKDLRRHMLTHTNEKPFSCHVCGQRFNRNGHLKFHIQRLHS 1128
>gi|260813384|ref|XP_002601398.1| hypothetical protein BRAFLDRAFT_243940 [Branchiostoma floridae]
gi|229286693|gb|EEN57410.1| hypothetical protein BRAFLDRAFT_243940 [Branchiostoma floridae]
Length = 589
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y ++ H H G+K +KC C Y A Q+ L +H+ KH+
Sbjct: 12 FVCGECGYRAAYRSHISQHMRTHTGEKPYKCHHCDYAATQQGSLAYHIAKKHT 64
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y T ++ HT H G+K +KC C Y A +++ L+ HV N
Sbjct: 536 YMCGECGYRTAKKSHLSRHTKTHTGEKPYKCDHCHYSAARRDDLKKHVAN 585
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H IH G+K +KC C Y A K L+ HV
Sbjct: 340 YMCGECGYSTAKKSHLTEHVRIHTGEKPYKCDRCDYSAATKTALKQHV 387
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++++ + L EH VR + + C CDY ++ H IH
Sbjct: 339 PYMCGEC-GYSTAKKSHLTEH-------VRIHTGEKPYKCDRCDYSAATKTALKQHVAIH 390
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K + C C Y QK L H++
Sbjct: 391 TGEKPYMCGECGYRTAQKSHLSKHMRK 417
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 14/96 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + L LM+HS P ++C C Y T
Sbjct: 414 HMRKHTGEKPYKCDQCDYAAAQKGTLDQHLMKHSGEKP-----------YMCGECGYRTA 462
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++ H H G+K +KC C Y A K L H
Sbjct: 463 NKSHLSRHMRTHTGEKPYKCDQCDYSAAHKHHLDHH 498
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C+ + NL L +H+ P ++C C Y + ++ H
Sbjct: 222 PYKCDQCEYAAAHKSNLDKHLRKHTGEKP-----------YMCGECGYRAALKAHVSQHM 270
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G++ +KC C Y A QK L H+
Sbjct: 271 RTHTGERPYKCDQCDYSAAQKSTLDRHL 298
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A QK L H+
Sbjct: 396 YMCGECGYRTAQKSHLSKHMRKHTGEKPYKCDQCDYAAAQKGTLDQHL 443
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY + H + H G+K +KC C Y A K L H++
Sbjct: 195 FTCDRCDYSAAQKCTLDRHLMTHTGEKPYKCDQCEYAAAHKSNLDKHLRK 244
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y ++ H IH G+K + C C Y +K L H K
Sbjct: 508 YMCGECGYRAAQKSDLSKHMRIHTGEKPYMCGECGYRTAKKSHLSRHTKT 557
>gi|403290846|ref|XP_003936518.1| PREDICTED: zinc finger protein 335 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1190
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 469 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 522
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 458 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 502
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 503 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 556
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 925 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 975
>gi|260832600|ref|XP_002611245.1| hypothetical protein BRAFLDRAFT_207658 [Branchiostoma floridae]
gi|229296616|gb|EEN67255.1| hypothetical protein BRAFLDRAFT_207658 [Branchiostoma floridae]
Length = 265
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY S + HT H G+K +KC C Y A K L H+ N
Sbjct: 14 FACTECDYRATTSTKLSIHTRRHTGEKPYKCDQCDYSAAHKHSLNIHLAN 63
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C +S NL + +H+E+ +++C C + T
Sbjct: 116 HMRRHTGEKPYKCDQCDYSGASKSNLDQHMAKHAED-----------KRYMCGECGFRTT 164
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+++ H H G K +KC C Y A QK L H K KH+
Sbjct: 165 AKSSLKVHMRRHTGMKPYKCDQCDYSAAQKSNLDRH-KAKHT 205
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CDY N+ H H G+K +KC C Y A K L H K +H+
Sbjct: 182 YKCDQCDYSAAQKSNLDRHKAKHTGEKPYKCDRCDYSAAHKTALDRH-KARHT 233
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 47 SVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
V P C +C +++++ + L EH +R + + C CDY N+ H
Sbjct: 94 GVKPYKCDYC-DYSTAQKSHLTEH-------MRRHTGEKPYKCDQCDYSGASKSNLDQHM 145
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
H DK++ C C + K L+ H++
Sbjct: 146 AKHAEDKRYMCGECGFRTTAKSSLKVHMRR 175
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++ + L EH +R + C CDY T ++ H H
Sbjct: 69 PFMCGQC-GYSTNNRSRLAEH-------IRSHTGVKPYKCDYCDYSTAQKSHLTEHMRRH 120
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C Y K L H+
Sbjct: 121 TGEKPYKCDQCDYSGASKSNLDQHM 145
>gi|260787871|ref|XP_002588975.1| hypothetical protein BRAFLDRAFT_89166 [Branchiostoma floridae]
gi|229274147|gb|EEN44986.1| hypothetical protein BRAFLDRAFT_89166 [Branchiostoma floridae]
Length = 390
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C F ++ + L EH +R + + C CD+ T N++ H IH
Sbjct: 302 PYMCREC-GFRTARKSTLSEH-------MRTHTGEKPYKCDQCDFSTAYKSNLKKHLAIH 353
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
GDK + C C Y +K +L H++
Sbjct: 354 TGDKPYMCGECGYRTARKSQLSQHMRT 380
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T + H H G+K FKC C Y A QK L H+
Sbjct: 56 FMCGECCYRTSWKSALSQHMRTHTGEKPFKCDQCDYSAAQKYSLDQHI 103
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 20/48 (41%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
C CD+ H IH GDK C C Y QK KL H++
Sbjct: 142 CDQCDFSAAYKSMFNRHQAIHTGDKPHMCGECGYRTAQKSKLSIHMRT 189
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C T+ L + +R + + C CDY + + H IH
Sbjct: 167 PHMCGECGYRTAQKSKLSIH--------MRTHTGEKPYKCDQCDYSAAVKATLDCHLAIH 218
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
GD+ C C Y QK L H++
Sbjct: 219 TGDRPHMCGECGYRTAQKYALSMHMRT 245
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T + H H G+K +KC C Y A QK L H+
Sbjct: 225 MCGECGYRTAQKYALSMHMRTHTGEKPYKCDQCDYSAAQKSTLDRHL 271
>gi|260787833|ref|XP_002588956.1| hypothetical protein BRAFLDRAFT_89147 [Branchiostoma floridae]
gi|229274128|gb|EEN44967.1| hypothetical protein BRAFLDRAFT_89147 [Branchiostoma floridae]
Length = 652
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + ++ H H GDK FKC C Y A QK L H+ KH+
Sbjct: 49 YMCRECGYRAAVKSHLSQHMRTHTGDKPFKCDQCDYSAAQKSSLDLHLA-KHT 100
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T ++ NH H GDK FKC C Y K L H+ +KH+
Sbjct: 105 YMCGECGYRTAKRSHLANHMRTHTGDKPFKCDQCDYSTAYKPNLDRHL-SKHT 156
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 25/55 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY T N+ H H GDK + C C Y A +K L H++ K
Sbjct: 133 FKCDQCDYSTAYKPNLDRHLSKHTGDKPYMCGECGYRAAEKSALVKHMRTHTGEK 187
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C T+ NL L +H+ + P ++C C Y + H
Sbjct: 132 PFKCDQCDYSTAYKPNLDRHLSKHTGDKP-----------YMCGECGYRAAEKSALVKHM 180
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
H G+K +KC C Y A Q+ L H+ + K
Sbjct: 181 RTHTGEKPYKCDQCYYSAAQRCSLDQHLAHHTGDK 215
>gi|432959345|ref|XP_004086251.1| PREDICTED: transcriptional repressor CTCF-like [Oryzias latipes]
Length = 833
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 414 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 468
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 413 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 464
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 465 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 497
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+F C CDY ++M H H G+K F C C QK+ L H K H
Sbjct: 557 RFKCDMCDYCCRQERHMVMHRRTHTGEKPFGCSQCEKTFRQKQLLDMHFKRYH 609
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 16/107 (14%)
Query: 38 TCPNMSFLNSVI-------PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICV 90
TCP S L+ + P C C + V LL H N RP C
Sbjct: 337 TCPRRSNLDRHMKSHTDERPHKCHLCGRAFRT-VTLLRNHL-NTHTGTRPHK------CT 388
Query: 91 ACDY-FTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
CD F + +R+ H +K FKC +C Y + + KL+ H+++
Sbjct: 389 DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRS 435
>gi|260823036|ref|XP_002603989.1| hypothetical protein BRAFLDRAFT_71723 [Branchiostoma floridae]
gi|229289314|gb|EEN60000.1| hypothetical protein BRAFLDRAFT_71723 [Branchiostoma floridae]
Length = 1004
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C CD+ + ++R H H GDK F C C Y AY + L H++N K
Sbjct: 725 YKCDHCDFSSARKDDLRKHVANHTGDKPFMCVECGYRAYTRSDLSAHMRNHSGEK 779
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC +F+S+ + L +H N +P F+CV C Y ++ H H
Sbjct: 724 PYKCDHC-DFSSARKDDLRKHVAN-HTGDKP------FMCVECGYRAYTRSDLSAHMRNH 775
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C Y A QK L H+
Sbjct: 776 SGEKPYKCEQCDYSAAQKGNLDRHL 800
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y T ++ H H G+K +KC C Y A QK L H+
Sbjct: 641 YICWECGYSTACKSHLSQHMRTHTGEKPYKCDQCDYSAAQKSALHAHL 688
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C+ C + NL LM+H+ P F+C C + T + H
Sbjct: 780 PYKCEQCDYSAAQKGNLDRHLMKHTGEKP-----------FMCDECGFRTPCKSTLIRHM 828
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K +KC C Y A QK L H+
Sbjct: 829 RSHSGEKPYKCDQCDYSAVQKGDLDNHL 856
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 87 FICVACDYFTI----ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y +S+ MR HT G+K +KC C Y A QK L H+ K S K
Sbjct: 585 YMCEECGYRATKMFDLSRRMRTHT----GEKPYKCDQCDYAAAQKGNLDQHIAAKLSEK 639
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T + ++ H H +K +KC LC+Y A K +L H+
Sbjct: 921 YMCGECGFRTADTSDLSRHKWTHTREKPYKCHLCNYSAAIKARLSKHL 968
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C + T N+ H H G K FKC C Y A +K L H+
Sbjct: 865 FMCGECGHRTARKSNLSRHMRTHSGRKPFKCDQCDYCAARKCTLDRHI 912
>gi|395829125|ref|XP_003787711.1| PREDICTED: zinc finger protein 335 isoform 2 [Otolemur garnettii]
Length = 1190
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 470 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 523
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 459 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 503
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 504 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 557
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 927 CSQCSFASKNKKDLRRHVLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 977
>gi|260832830|ref|XP_002611360.1| hypothetical protein BRAFLDRAFT_210900 [Branchiostoma floridae]
gi|229296731|gb|EEN67370.1| hypothetical protein BRAFLDRAFT_210900 [Branchiostoma floridae]
Length = 489
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++CV C Y ++ N+ H H G+K FKC C + A QK L H +
Sbjct: 11 YMCVECGYRAVLKTNLDRHIRTHTGEKPFKCDQCDFSAAQKSSLDIHQR 59
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CD+ T N+ H H G+K +KC LC Y A QK L H + KH+
Sbjct: 207 YRCDLCDHSTAQKSNLSQHMRTHTGEKPYKCDLCDYSAAQKSTLNIH-RRKHT 258
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T ++ H H G+K FKC LC Y A K L+ H + KH+
Sbjct: 67 YMCGECGYRTAKKSHLSRHMKTHTGEKHFKCDLCDYSAAVKSNLKRH-RRKHT 118
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + N++ H L H G+K + C C Y +K L H++
Sbjct: 347 YKCDLCDYSAAVKSNLKRHQLKHTGEKPYMCGECGYRTVEKSALSIHMRT 396
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY + N++ H H G+K + C C Y K L H+K
Sbjct: 95 FKCDLCDYSAAVKSNLKRHRRKHTGEKPYMCDECGYRTVDKSTLSIHIKT 144
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T+ + H H G+K +KC LC Y A K L H + KH+
Sbjct: 422 YMCGECGYRTVEKSALSIHMRTHTGEKPYKCDLCDYSAAGKSALNIH-RRKHT 473
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y T+ + H H G+K ++C LC + QK L H++
Sbjct: 179 YMCGECGYRTVQKSTLSRHMRTHTGEKPYRCDLCDHSTAQKSNLSQHMRT 228
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CD+ + N+ H L H G+K + C C Y QK L H++
Sbjct: 151 YKCDLCDFSAAVKSNLNRHQLKHTGEKPYMCGECGYRTVQKSTLSRHMRT 200
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 31/80 (38%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K + + M H +R + + C CDY + N+ H H GDK +
Sbjct: 261 KPYMCGECGYRMAHKSALSLHMRTHTGEKPYKCDQCDYSAVQKINLDIHLAKHTGDKPYM 320
Query: 117 CCLCSYGAYQKEKLQFHVKN 136
C C Y +K L H++
Sbjct: 321 CGECGYQGIEKSALSIHMRT 340
>gi|18539217|emb|CAD22532.1| enhancer binding protein [Paracentrotus lividus]
Length = 939
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C CDY ++ + ++ H H G+K +KC LC Y + KL+ H++
Sbjct: 532 CPLCDYLSVEASKIKRHMRSHTGEKPYKCTLCEYCSTDNYKLKRHMR 578
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 24/122 (19%)
Query: 36 CQTCP-----------NMSFLNS-VIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPV 83
C+ CP +M ++++ P C C ++ S + + + H +R
Sbjct: 503 CELCPKAFGTSGELGRHMKYMHTHEKPHKCPLC-DYLSVEASKIKRH-------MRSHTG 554
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQ----FHVKNKHS 139
+ + C C+Y + + ++ H +H G++ F C C QK L+ HV N+ S
Sbjct: 555 EKPYKCTLCEYCSTDNYKLKRHMRVHTGERPFSCSQCDQAFSQKSSLKEHEWKHVGNRPS 614
Query: 140 TK 141
K
Sbjct: 615 HK 616
>gi|260799997|ref|XP_002594923.1| hypothetical protein BRAFLDRAFT_72305 [Branchiostoma floridae]
gi|229280161|gb|EEN50934.1| hypothetical protein BRAFLDRAFT_72305 [Branchiostoma floridae]
Length = 486
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY TI Q+++ H IH G+K +KC +C Y A ++ L+ H+
Sbjct: 215 YKCKICDYSTIQKQHLKQHMAIHTGEKPYKCKICDYSAAEQCNLKRHM 262
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT-LI 108
P C+HC+ +T+ L H VRP ++C C Y T + +H I
Sbjct: 99 PHRCQHCE-YTAVQSQCLKRHVMAKHSGVRP------YVCGHCGYATADKYVLLSHVRTI 151
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G+K ++C +C Y A +K L+ H+ KHS
Sbjct: 152 HGGEKPYQCAICDYSAAKKCNLESHIMAKHS 182
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CDY T I +R H H G+K +KC +C++ A + L+ H+
Sbjct: 355 FKCHVCDYSTAIKSALRQHMYKHTGEKPYKCGICAHSATRMSHLKRHM 402
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY + +++ H H G+K +KC LC Y A Q L+ H+
Sbjct: 299 YKCDQCDYSAAVKSSLKLHMTTHTGEKAYKCGLCDYSASQMPHLKLHM 346
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQN 101
M+ + V P C HC + ++D +L+ H +P + C CDY N
Sbjct: 120 MAKHSGVRPYVCGHC-GYATADKYVLLSHVRTIHGGEKP------YQCAICDYSAAKKCN 172
Query: 102 MRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ +H + H + KC C + + K+ L+FH+ N
Sbjct: 173 LESHIMAKHSNHRPHKCTECDFSSVSKKNLKFHMAN 208
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
K C C Y T + M H IH G++ +C C Y A Q + L+ HV KHS
Sbjct: 71 KHKCPQCGYETDMKSAMTKHLRIHTGERPHRCQHCEYTAVQSQCLKRHVMAKHS 124
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY N++ H L H G K +KC C Y A Q L+ H+
Sbjct: 243 YKCKICDYSAAEQCNLKRHMLKHTGSKPYKCNKCDYSATQMSHLKLHM 290
>gi|148674488|gb|EDL06435.1| mCG17525, isoform CRA_b [Mus musculus]
Length = 729
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 13 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 66
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI-HLG 111
C+ C+ F D L+ H + V P K C C Y T + +H + H G
Sbjct: 16 CEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSFCPYRTFREDFLLSHVAVKHTG 67
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
K F C C + K+ L+ HV+ +H+ ++
Sbjct: 68 AKPFACEYCHFSTRHKKNLRLHVRCRHANSFEE 100
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C +C + L+FH++ HS
Sbjct: 469 CNQCSFASKNKKDLRRHMLTHTNEKPFSCHVCGQRFNRNGHLKFHIQRLHS 519
>gi|260806334|ref|XP_002598039.1| hypothetical protein BRAFLDRAFT_108612 [Branchiostoma floridae]
gi|229283310|gb|EEN54051.1| hypothetical protein BRAFLDRAFT_108612 [Branchiostoma floridae]
Length = 991
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M V P C C + L L++H+ P F+C C Y T
Sbjct: 120 HMKSHTGVKPYKCDQCDYSAAHKATLDRHLVKHTGEKP-----------FVCGKCGYRTT 168
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G+KQ+KC C Y A K L H+
Sbjct: 169 QMSNLSRHMRTHTGEKQYKCDQCDYSAANKSTLDRHL 205
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T+ ++ H H G+K +KC LC Y A K L++HV
Sbjct: 706 YKCGDCGYRTVTKFDLTKHRRTHTGEKPYKCDLCDYSAANKSSLRYHV 753
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
FIC C Y T + H IH G+K +KC C Y A K LQ H+
Sbjct: 594 FICKECGYKTTQQYYLSRHMRIHTGEKPYKCDQCDYSAATKSTLQSHL 641
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T+ +++ H IH G+K +KC C Y A + L+ H KH+
Sbjct: 818 YMCGECGHRTVTKYDLQKHLRIHTGEKPYKCDQCDYSATESNHLKTHKLAKHT 870
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C + T N+ H H G+K +KC C Y A K +L H+
Sbjct: 762 YICGECGFRTAKKYNLTKHMKTHTGEKPYKCDQCDYSAANKSRLDHHL 809
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y + H H G+K FKC C Y A +K +L +H+
Sbjct: 316 LMCGECGYLAPYKSALAMHMRTHTGEKPFKCDRCDYSAARKSQLDYHI 363
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + ++ H H G+K FKC C Y A QK L H+
Sbjct: 46 YMCGECGYRAVKRADLYKHMRKHSGEKPFKCDQCDYSAAQKSTLDQHL 93
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y T S ++ H H G K +KC C Y A K L H+
Sbjct: 102 YICGECGYMTAKSSHLTQHMKSHTGVKPYKCDQCDYSAAHKATLDRHL 149
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L H R P K C C Y T
Sbjct: 612 HMRIHTGEKPYKCDQC-DYSAATKSTLQSH---LATHTREKPYK----CGECGYRTAFKS 663
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K +KC C Y A K + HV
Sbjct: 664 TLTRHMRTHTGEKPYKCDQCDYAAPTKTSFKKHV 697
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +F ++ + L+EH P ++C C Y T+
Sbjct: 390 HMRIHTGEKPYKCDQC-DFAAARKSALVEHQAK---HTGEKP----YMCEECGYRTVHKS 441
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K FKC C Y A +K L H+
Sbjct: 442 YLIVHKKTHTGEKPFKCDQCDYSAVRKCHLDIHL 475
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++++++ N L H +P F+C C + + + H H
Sbjct: 845 PYKCDQC-DYSATESNHLKTHKLAKHTGEKP------FLCGECGFRSTQRTQLTIHMRTH 897
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y A + L H KHS
Sbjct: 898 TGEKPYKCDQCDYSAASRGNLSKHNLVKHS 927
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ L +H+ +V+ ++ + C C+Y T+
Sbjct: 893 HMRTHTGEKPYKCDQC-DYSAASRGNLSKHN-----LVKHSGMEKPYKCGECEYATMRQN 946
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H H G+K +KC C + + K L H+K
Sbjct: 947 HLSQHMRKHTGEKPYKCDQCDFCSAYKNALNKHMKQ 982
>gi|260823138|ref|XP_002604040.1| hypothetical protein BRAFLDRAFT_119784 [Branchiostoma floridae]
gi|229289365|gb|EEN60051.1| hypothetical protein BRAFLDRAFT_119784 [Branchiostoma floridae]
Length = 1272
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+IC C Y N+ H H G+K +KC C Y A QK L HV KH
Sbjct: 140 YICGQCGYKATNKGNIAKHVRTHTGEKPYKCDQCDYSATQKSHLNRHVATKH 191
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+Y ++C C+Y T+ N +H H G+K +KC C Y A K L H+ +H+
Sbjct: 928 EYPYMCGECEYRTVRKSNFSDHMRTHTGEKPYKCDQCDYSAILKSYLNKHISRQHN 983
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + + H H GDK +KC C+Y A QK L H+ KH+
Sbjct: 761 YMCGECGYRATLKPLLSRHMRTHTGDKPYKCDQCNYSAAQKGTLDQHIAAKHN 813
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C N++++ L +H +P ++C C Y +
Sbjct: 779 HMRTHTGDKPYKCDQC-NYSAAQKGTLDQHIAAKHNGEKP------YMCGECGYRSAYKS 831
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H H G+K +KC C Y QK L H+ KHS
Sbjct: 832 GLYRHMKSHTGEKPYKCDQCDYSVAQKSTLDKHIAAKHS 870
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + + H H+GDK + C C Y A K +L H++
Sbjct: 1072 YKCDQCDYSAALKSRLNEHIARHIGDKPYMCGECGYRAANKSRLAIHMR 1120
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
CDY I +++ H H G K FKC C Y A QK +L H+ KHS
Sbjct: 2 CDYSAIQKVHLKQHAAAKHTGKKPFKCDQCDYSAAQKARLTKHIAAKHS 50
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T S NH H G+K FKC C Y A +K L H K KH+
Sbjct: 875 YMCGECGYSTTYSSTFSNHMRTHTGEKPFKCDQCDYSASKKCYLDQH-KTKHT 926
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y T + H H G+K +KC C Y A +K L+ H+
Sbjct: 311 YICEQCGYRTTEKYRLSQHMKTHSGEKPYKCDQCDYSAAEKSNLKRHL 358
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T+ + H H G+K +KC C Y A K +L H+
Sbjct: 1044 YMCGECGYRTVKKSRLSIHMRTHTGEKPYKCDQCDYSAALKSRLNEHI 1091
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C Y + N+ H H +K+FKC C Y A K L H KH+ +
Sbjct: 83 YKCGECGYRSAYKCNLSQHMRTHTREKRFKCGQCDYVAVNKSYLDIHTVEKHTGR 137
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N++ H + H G+K + C C Y +K L H++
Sbjct: 339 YKCDQCDYSAAEKSNLKRHLVKHTGEKPYMCGECGYRTTEKSNLTKHLR 387
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H G+K FKC C + A QK L H+
Sbjct: 584 YMCGECGYRAAQKYHLSRHMRTHTGEKPFKCDQCDFSAAQKSTLDKHL 631
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ NH H GDK + C C Y +K +L H+K
Sbjct: 283 YKCDQCDYSAGRKSHLDNHLASHTGDKPYICEQCGYRTTEKYRLSQHMK 331
>gi|260808229|ref|XP_002598910.1| hypothetical protein BRAFLDRAFT_122441 [Branchiostoma floridae]
gi|229284185|gb|EEN54922.1| hypothetical protein BRAFLDRAFT_122441 [Branchiostoma floridae]
Length = 2245
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C NF+++ + L +H + + ++C C Y ++ H H
Sbjct: 876 PYKCEEC-NFSAAQKSTLRQH-------LAKHTGEKPYMCGECGYRAAQKSHLSRHMRTH 927
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
GDK FKC C + A QK L +H+
Sbjct: 928 TGDKPFKCDQCDFSAAQKSSLDYHL 952
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++++++ + L H +P ++C C Y T S N+ H H
Sbjct: 2076 PYKCDQC-DYSAANKSTLKNHLAARHTGEKP------YMCGECGYRTYQSSNLSRHMRTH 2128
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K +KC C Y A K L H+ N
Sbjct: 2129 TGEKPYKCDQCDYSAAHKYSLDIHLAN 2155
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C T+ +L VR + ++C C + T N+ H H
Sbjct: 2161 PYMCRECGYRTAHKSDLTKH--------VRTHTGEKPYMCGECGFRTAKKSNISQHMRTH 2212
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C Y A QK L HV
Sbjct: 2213 TGEKPYKCDQCDYSAAQKSHLDIHV 2237
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H G+K FKC C Y A K L FH+
Sbjct: 65 YMCGECGYRTANTSHLSRHMRTHTGEKPFKCDQCDYSAGSKSSLDFHM 112
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C T+ NL +H+ P ++C C Y T
Sbjct: 1732 HMRIHTEEKPYKCDQCDYATARKSNLDRHRTKHTGEKP-----------YMCGECGYRTA 1780
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H IH G++ +KC C Y A QK L H+
Sbjct: 1781 RKFNLSLHVRIHTGERPYKCDQCDYSAVQKSSLDIHL 1817
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
+F+++D + H +P ++C C + ++ H IH G+K +KC
Sbjct: 543 DFSAADRYTFIRHLRKHSGDEKP------YMCGECGFRAEHKSDLSIHMRIHTGEKPYKC 596
Query: 118 CLCSYGAYQKEKLQFHVKNKHS 139
C+Y A +K LQ H+ KH+
Sbjct: 597 DQCNYSAARKSNLQQHLAAKHT 618
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C Y T + + H IH G+K +KC C Y A K L+ H+ +H+
Sbjct: 2049 YKCGECGYRTAVKSALSIHVRIHTGEKPYKCDQCDYSAANKSTLKNHLAARHT 2101
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY T+I N+ H H G+K + C C Y +K L H++
Sbjct: 989 YKCDQCDYTTVIKSNLNKHLARHTGEKPYMCGECGYRTTEKSTLSKHMR 1037
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G+K +KC C Y A QK L H+
Sbjct: 1017 YMCGECGYRTTEKSTLSKHMRTHTGEKPYKCDQCDYSAVQKSTLDLHL 1064
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
+ C C Y T + ++ HT H G+K ++C C Y +K L H+ KH+ ++
Sbjct: 121 YKCGECGYRTALRLDLARHTRTHTGEKPYRCDQCDYATARKASLDDHM-TKHTDEM 175
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T ++ H H G+K +KC LC Y A + L H+
Sbjct: 206 MCRECGYRTAYKSDLSRHMRTHTGEKPYKCDLCDYSASRTSTLNKHL 252
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H H G+K +KC C Y A QK L H+
Sbjct: 765 YMCEECGYRADRKSTLSRHMRTHTGEKPYKCDQCDYSAAQKYSLDIHL 812
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A +K L H+
Sbjct: 1658 YMCGECGYRTAKKCHLSQHMRTHTGEKPYKCDQCDYSAARKSHLDIHL 1705
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + + H H G+K + C +C Y A +K+ L H++
Sbjct: 233 YKCDLCDYSASRTSTLNKHLAKHTGEKPYMCGVCGYRAARKDTLSGHMR 281
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H G+K FKC C Y A +K L H+
Sbjct: 1330 YMCGECGYRAAQKSHLAVHMRTHTGEKPFKCDQCDYSAVRKSTLNIHL 1377
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++ + L++H +R + + C C++ +R H H
Sbjct: 848 PYMCGEC-GYRATWKSALLQH-------IRTHTGQKPYKCEECNFSAAQKSTLRQHLAKH 899
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K + C C Y A QK L H++
Sbjct: 900 TGEKPYMCGECGYRAAQKSHLSRHMR 925
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CDY ++ H L H K + C C Y A QK L +H+ KH+
Sbjct: 1273 YKCDQCDYSATQKNHLDIHLLKHTSQKPYICGECGYRAAQKSTLDWHIVAKHT 1325
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C T+ NL + VR + + C CDY + ++ H H
Sbjct: 1769 PYMCGECGYRTARKFNLSLH--------VRIHTGERPYKCDQCDYSAVQKSSLDIHLAKH 1820
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C Y A QK L H+
Sbjct: 1821 TGNKPYKCDQCDYSAAQKCALVRHL 1845
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H H G+K +KC C Y A K H+
Sbjct: 261 YMCGVCGYRAARKDTLSGHMRTHTGEKPYKCDQCDYSARHKSSFDIHL 308
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 16/88 (18%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P SC+ + F NL L +H+ + P ++C C Y + H
Sbjct: 1938 PASCQ--ETFDGKKSNLDQHLTKHTGDKP-----------YMCGECGYRAARKFTLSVHM 1984
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K +KC C Y A QK L H+
Sbjct: 1985 RTHTGEKPYKCDQCDYSAAQKSSLDSHL 2012
>gi|426391974|ref|XP_004062338.1| PREDICTED: zinc finger protein 335 isoform 2 [Gorilla gorilla
gorilla]
Length = 1187
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 465 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 518
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 454 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 498
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 499 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 552
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 922 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 972
>gi|397511357|ref|XP_003826043.1| PREDICTED: zinc finger protein 335 isoform 2 [Pan paniscus]
Length = 1187
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 465 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 518
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 454 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 498
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 499 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 552
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 922 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 972
>gi|194384738|dbj|BAG59529.1| unnamed protein product [Homo sapiens]
Length = 1187
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 465 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 518
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 454 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 498
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 499 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 552
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 922 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 972
>gi|260810999|ref|XP_002600210.1| hypothetical protein BRAFLDRAFT_66715 [Branchiostoma floridae]
gi|229285496|gb|EEN56222.1| hypothetical protein BRAFLDRAFT_66715 [Branchiostoma floridae]
Length = 863
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H H G+K FKC C Y A QK +L HV ++H+
Sbjct: 713 YMCGECGYRTADKSALTKHMRTHTGEKPFKCDQCDYSAIQKGQLDRHVLSRHT 765
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+IC C Y T ++ H IH G K +KC C Y A QK ++ H+ KHS++
Sbjct: 108 YICGECGYRTAHKSSISVHMRIHTGSKPYKCNQCDYSAAQKNNVKQHML-KHSSE 161
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ V P C+ C T+ NL M R K ++C C Y T+ S
Sbjct: 360 HMAEHTGVKPYKCEECGYRTAVSCNLSRH-------MARHTGQK-AYMCGECGYRTVNSD 411
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQK 127
+++ H H G+K +KC C + + +K
Sbjct: 412 HLKVHMRKHTGEKPYKCEQCDFSSARK 438
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 17/103 (16%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCM-----------------VRPDPVKYKFICVAC 92
P C C + +L ++H+ P M +R P + C C
Sbjct: 631 PFKCDQCDYSATQKEDLALKHNREKPFMCGECGFKAVGKPELYKHMRMHPGVKPYKCDQC 690
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
DY + H +IH GDK + C C Y K L H++
Sbjct: 691 DYSAEYKSILGRHMVIHTGDKPYMCGECGYRTADKSALTKHMR 733
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ ++L+ +E+ V+P + C C Y T +S N+ H H
Sbjct: 341 PYRCDLCDYSSAHRISLVQHMAEHT--GVKP------YKCEECGYRTAVSCNLSRHMARH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G K + C C Y + L+ H++
Sbjct: 393 TGQKAYMCGECGYRTVNSDHLKVHMR 418
>gi|260788983|ref|XP_002589528.1| hypothetical protein BRAFLDRAFT_107772 [Branchiostoma floridae]
gi|229274706|gb|EEN45539.1| hypothetical protein BRAFLDRAFT_107772 [Branchiostoma floridae]
Length = 670
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F+C C Y T++ ++ H H G+K +KC C Y A QK L H++
Sbjct: 445 FMCGQCGYRTVVRSHLSRHMRTHTGEKPYKCDECDYSAAQKSTLDSHLR 493
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 76 CMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C + + +++CV C Y T ++ H H G+K +KC C Y A K L+ H+
Sbjct: 47 CQLEAQTNERRYVCVDCGYRTANKNDLSRHIRKHTGEKPYKCDQCDYSATLKANLERHL 105
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 20/114 (17%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCM-----------------VRP 80
+M + P C C + NL L HS+ P M ++
Sbjct: 132 HMRTHTGIKPYKCDQCDYSAAQKSNLDSHLANHSDEKPFMCEECGFRTAHRRHLSRHMKT 191
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ ++C C+Y TI ++ H H G+ +KC C Y A QK L+ H+
Sbjct: 192 HTAEKPYMCGECEYKTIQKCDLSRHMRTHTGENLYKCGQCDYSAAQKSTLERHL 245
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
+ +++ N L H +R + + C CDY + N+ H L H GDK + C
Sbjct: 64 GYRTANKNDLSRH-------IRKHTGEKPYKCDQCDYSATLKANLERHLLQHTGDKPYMC 116
Query: 118 CLCSYGAYQKEKLQFHVKN 136
C + Q+ L H++
Sbjct: 117 GECGHRTTQQSALAIHMRT 135
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H G+K +KC C Y A +K L H+
Sbjct: 306 YMCGECGYRTAVKSHLSRHMRTHTGEKPYKCDQCDYSAARKSSLDSHL 353
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 20/116 (17%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCM-----------------VRP 80
+M P C HC S L + +H+ + P M +R
Sbjct: 519 HMRTHTGEKPYKCDHCDYSASEKATLNSHVAKHTGDEPFMCGECGYRTAVKSRLSKHMRT 578
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ + C CDY N+ NH L H G+K + C C Y +K L H++
Sbjct: 579 HTGERPYKCDQCDYSAAHKSNLDNHLLKHTGEKPYMCGECGYRTTRKSHLSLHMRR 634
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + +H H GDK F C C Y A QK L H++
Sbjct: 473 YKCDECDYSAAQKSTLDSHLRKHTGDKPFMCGECGYRAVQKSALSIHMRT 522
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L H +R F+C C Y +
Sbjct: 463 HMRTHTGEKPYKCDEC-DYSAAQKSTLDSH-------LRKHTGDKPFMCGECGYRAVQKS 514
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K +KC C Y A +K L HV
Sbjct: 515 ALSIHMRTHTGEKPYKCDHCDYSASEKATLNSHV 548
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + NL L++H+ + P ++C C + T + H
Sbjct: 85 PYKCDQCDYSATLKANLERHLLQHTGDKP-----------YMCGECGHRTTQQSALAIHM 133
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
H G K +KC C Y A QK L H+ N
Sbjct: 134 RTHTGIKPYKCDQCDYSAAQKSNLDSHLAN 163
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Query: 87 FICVACDYFTI----ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y +SQ+MR HT G+K +KC C Y A QK L+ H+
Sbjct: 362 YMCGECGYRATRRFYLSQHMRRHT----GEKPYKCDQCDYSAAQKSTLKSHL 409
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L++H+ P ++C C Y T
Sbjct: 575 HMRTHTGERPYKCDQCDYSAAHKSNLDNHLLKHTGEKP-----------YMCGECGYRTT 623
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K ++C C Y A +K L+ H+
Sbjct: 624 RKSHLSLHMRRHTGEKPYRCDQCDYSATKKSTLKNHL 660
>gi|126296259|ref|XP_001366248.1| PREDICTED: zinc finger protein 335 [Monodelphis domestica]
Length = 1360
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 22/101 (21%)
Query: 39 CPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTII 98
CP+ SF+ + P+ H + +HS +RP C C + +
Sbjct: 1067 CPDCSFIAHLWPEVRAH-----------MAQHSS-----LRPHQ------CSQCSFASKN 1104
Query: 99 SQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+++R HTL H +K F C LC + L+FH++ HS
Sbjct: 1105 KKDLRRHTLTHTNEKPFSCHLCGQRFNRNGHLKFHIQRLHS 1145
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 622 RFKCEFCEFVCEDKKLLLNHQLSHVSDKPFKCNFCPYRTFREDFLLSHVAVKHT 675
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D LL+ H + V P K C
Sbjct: 611 LLTHIQAIANRRF-------KCEFCE-FVCEDKKLLLNHQLS---HVSDKPFK----CNF 655
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +HS ++
Sbjct: 656 CPYRTFREDFLLSHVAVKHTGAKPFACEFCHFTTRHKKNLRLHVRCRHSASFEE 709
>gi|432867197|ref|XP_004071073.1| PREDICTED: zinc finger protein 64 homolog, isoforms 1 and 2-like
[Oryzias latipes]
Length = 651
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CD I+ +++ H IH G+K FKC C Y K L+ HV+ +HS++
Sbjct: 198 FQCQQCDAKFKINSDLKRHVRIHSGEKPFKCDFCEYRCTMKGNLKSHVQIRHSSE 252
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
C C Y S +++ H IH ++ FKC +C Y + +L H+++
Sbjct: 144 CKLCPYAAADSSSLKKHLRIHYDERPFKCQICPYASRNSSQLTVHLRS 191
>gi|311274980|ref|XP_003134524.1| PREDICTED: zinc finger protein 335 [Sus scrofa]
Length = 1347
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 624 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCNFCPYRTFREDFLLSHVAVKHT 677
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 613 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CNF 657
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 658 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 711
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1082 CSQCSFASKNKKDLRRHMLTHTNEKPFACHLCGQRFNRNGHLKFHIQRLHS 1132
>gi|388594900|gb|AFK74885.1| transcription factor ZNF69 [Hydra vulgaris]
Length = 297
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C +C N+ ++L EH V+ + F C CDY N+ H IH
Sbjct: 198 PFKCTYC-NYECIRKDVLTEH-------VKIHTGEKPFKCTYCDYECARKTNLTRHVKIH 249
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K FKC C Y QK L HVK
Sbjct: 250 TGEKPFKCTYCDYECTQKGTLTAHVK 275
>gi|260823024|ref|XP_002603983.1| hypothetical protein BRAFLDRAFT_71729 [Branchiostoma floridae]
gi|229289308|gb|EEN59994.1| hypothetical protein BRAFLDRAFT_71729 [Branchiostoma floridae]
Length = 596
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y +M H H G+K +KC C Y A Q+ L +H+ KH+
Sbjct: 172 FMCGECGYRAAYRSHMSQHMRTHTGEKPYKCHHCDYAAAQQGSLAYHIATKHT 224
Score = 41.6 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC ++ ++ L H +P ++C C Y ++ H H
Sbjct: 199 PYKCHHC-DYAAAQQGSLAYHIATKHTGEKP------YMCEECGYRATKMFDLSRHMRTH 251
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K +KC C Y A QK L H+ KH+ K
Sbjct: 252 TGEKPYKCDQCDYSAAQKGNLDQHIAAKHTRK 283
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+CV C Y + H H G+K +KC C Y A K L H++ KH+
Sbjct: 299 FMCVECGYRAYSRSILSAHMRTHSGEKPYKCDQCDYSAADKSTLVKHIR-KHT 350
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T + H H G+K F C C Y A QK L H+
Sbjct: 411 FMCGECGYRTARKSTLYKHMRTHSGEKPFTCDRCDYSAAQKCTLDRHL 458
>gi|260823128|ref|XP_002604035.1| hypothetical protein BRAFLDRAFT_71675 [Branchiostoma floridae]
gi|229289360|gb|EEN60046.1| hypothetical protein BRAFLDRAFT_71675 [Branchiostoma floridae]
Length = 444
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C T+ NL LM HS P ++C C Y T
Sbjct: 270 HMKTHTGEKPYKCNQCDYSTAQKGNLDQHLMTHSGEKP-----------YMCGKCGYRTA 318
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G K +KC C Y A QK L H+
Sbjct: 319 QKANLSKHMRKHTGQKPYKCDQCDYAAAQKGNLDQHL 355
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ N+ H H G++ +KC C Y A QK L H+
Sbjct: 84 YMCGECGYRTAVNANLSRHMRTHTGERPYKCDQCDYSAAQKSTLDNHL 131
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 14/84 (16%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + NL LM+H+ P ++C C Y T N+ H
Sbjct: 335 PYKCDQCDYAAAQKGNLDQHLMKHTGEKP-----------YMCGECGYRTAQRSNLSQHL 383
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKL 130
H G+K +KC C Y A QK+ L
Sbjct: 384 RTHTGEKPYKCDQCDYSAAQKQHL 407
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY T N+ H + H G+K + C C Y QK L H++
Sbjct: 280 YKCNQCDYSTAQKGNLDQHLMTHSGEKPYMCGKCGYRTAQKANLSKHMR 328
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T ++ H H G++ +KC C Y A QK L HV
Sbjct: 140 YMCGECGFRTTRKSHLSAHMRTHTGERPYKCDKCDYSAAQKGNLNKHV 187
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G++ +KC C+Y + +K L+ HV
Sbjct: 196 YMCGECGYRTARKFDLSQHMRTHTGEQNYKCDQCNYSSSRKSHLEQHV 243
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 7/77 (9%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
N++SS + L +H V + ++C C Y + H H G+K +KC
Sbjct: 230 NYSSSRKSHLEQH-------VAKHTGEKPYLCGECGYRAARKFTLSEHMKTHTGEKPYKC 282
Query: 118 CLCSYGAYQKEKLQFHV 134
C Y QK L H+
Sbjct: 283 NQCDYSTAQKGNLDQHL 299
>gi|332858605|ref|XP_001160083.2| PREDICTED: zinc finger protein 335 isoform 1 [Pan troglodytes]
Length = 1183
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 461 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 514
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 450 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 494
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 495 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 548
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 918 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 968
>gi|260782867|ref|XP_002586502.1| hypothetical protein BRAFLDRAFT_149148 [Branchiostoma floridae]
gi|229271616|gb|EEN42513.1| hypothetical protein BRAFLDRAFT_149148 [Branchiostoma floridae]
Length = 183
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
K +++C C Y T ++ H H G+KQ+KC C Y A QK + H+ KH+
Sbjct: 4 TKTRYVCTDCGYRTAYRSHLSRHLRKHTGEKQYKCDRCDYSATQKCNIDRHIMVKHT 60
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C T++ NL +++H+ P ++C+ CD + ++ H
Sbjct: 64 PYICVECGYSTANKSNLTQHMIKHTGETP-----------YMCIECDSGAVSKSHLSVHM 112
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
H G+K +KC LC Y A QK + HV KH+++
Sbjct: 113 RKHTGEKPYKCHLCEYTAAQKGHIDQHVMIKHTSE 147
>gi|260789299|ref|XP_002589684.1| hypothetical protein BRAFLDRAFT_129473 [Branchiostoma floridae]
gi|229274866|gb|EEN45695.1| hypothetical protein BRAFLDRAFT_129473 [Branchiostoma floridae]
Length = 1089
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + ++ H H GDK FKC C Y A QK L H+
Sbjct: 49 YMCRECGYRAAVKSHLSQHMRTHTGDKPFKCDQCDYSAAQKSSLDLHL 96
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY T N+ H H GDK + C C Y A +K L HV+
Sbjct: 133 FKCDQCDYSTAYKPNLDRHLSKHTGDKPYMCGECGYRAAEKSALVKHVR 181
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Query: 30 DVFIGHCQTCPNMSFLNSVI-PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFI 88
D G + P S ++V P++ K + + + ++ N +R + +
Sbjct: 733 DWDAGETEDQPTASRTSAVSQPEANTDEKLYMCEECGYRLAYNSNLTQHMRTHTGEKPYK 792
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
C CDY N+ H IH GDK + C C Y +K L ++ KH+ K
Sbjct: 793 CDQCDYVAATKSNLDKHLAIHNGDKPYMCGECGYRTARKSTLSRQMR-KHTGK 844
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY + NH H G+K +KC C Y A +K L H+
Sbjct: 245 YKCDQCDYSAAEKSTLSNHMRTHTGEKPYKCDQCDYSASRKSSLDLHL 292
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T ++ NH H GDK FKC C Y K L H+ +KH+
Sbjct: 105 YMCGECGYRTAKRSHLANHMRTHTGDKPFKCDQCDYSTAYKPNLDRHL-SKHT 156
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P +C C T+ L L +H+ + P F+C C Y ++ +H
Sbjct: 902 PYNCDQCDYSTAHKSTLYKHLAKHTGDKP-----------FMCGECGYRAAQKSHLSDHM 950
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K +KC C Y A QK L H+
Sbjct: 951 RTHTGEKPYKCDQCDYSAAQKSTLNEHL 978
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY T + H H GDK F C C Y A QK L H++
Sbjct: 903 YNCDQCDYSTAHKSTLYKHLAKHTGDKPFMCGECGYRAAQKSHLSDHMR 951
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T + H H GDK +KC C Y A +K L H++
Sbjct: 217 YMCGECGYRTAKKSYLSRHMRSHTGDKPYKCDQCDYSAAEKSTLSNHMR 265
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 15/96 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + +L L +HS N P +IC C + T ++ H
Sbjct: 328 PYKCDQCNYSAARKDSLDLHLAKHSGNKP-----------YICGECGFKTAKKSHLAEHI 376
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+ +KC C Y A +K L H+ KHS +
Sbjct: 377 KTHTGETPYKCDQCDYSAARKSNLDSHLA-KHSDRT 411
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY T + H H GDK + C C Y QK L H++
Sbjct: 987 YKCDQCDYSTAHKSTLYKHLAKHTGDKPYMCGECGYRTAQKSTLSRHMR 1035
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C T+ L L +H+ + P ++C C Y T + H
Sbjct: 986 PYKCDQCDYSTAHKSTLYKHLAKHTGDKP-----------YMCGECGYRTAQKSTLSRHM 1034
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K +KC C Y A Q L+ H+
Sbjct: 1035 RTHTGEKPYKCDQCDYSAVQMFTLKQHI 1062
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+++ N P C C T+ L + +R K + C CDY
Sbjct: 809 HLAIHNGDKPYMCGECGYRTARKSTLSRQ--------MRKHTGKKTYKCDQCDYSAARKC 860
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++ H H GDK + C C Y QK L H++
Sbjct: 861 SLNQHLAKHTGDKPYMCGECGYRTVQKSHLSEHMR 895
>gi|297707240|ref|XP_002830420.1| PREDICTED: zinc finger protein 335 isoform 2 [Pongo abelii]
Length = 1190
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 470 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 523
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 459 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 503
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 504 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 557
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 925 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 975
>gi|260802183|ref|XP_002595972.1| hypothetical protein BRAFLDRAFT_60973 [Branchiostoma floridae]
gi|229281225|gb|EEN51984.1| hypothetical protein BRAFLDRAFT_60973 [Branchiostoma floridae]
Length = 565
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 53 CKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
CK C TS +NL + +H+ P + C CDY I N+ H + H
Sbjct: 68 CKQCDFSTSWQINLQRHMAQHTGEKP-----------YKCDQCDYSAIQKSNLDKHLVKH 116
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K F C LC YG K L H++
Sbjct: 117 TGEKPFVCELCGYGTAHKTHLARHMR 142
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C T+ +LL +R + + C CDYF + H + H
Sbjct: 206 PYKCGVCGYRTAYKAHLLRH--------MRKHASEKPYKCHQCDYFAAEKIYLDKHLVKH 257
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+K F C LC YG K L H+K KHS +
Sbjct: 258 ADEKPFVCELCGYGTESKAHLSRHMK-KHSGE 288
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC +F+++ L H+ +P + C CDY + ++ H H
Sbjct: 149 PYCCDHC-DFSTTWKVTLDRHTATKHTGEKP------YKCDQCDYSAVRKGHLDKHLANH 201
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K +KC +C Y K L H++ S K
Sbjct: 202 TGEKPYKCGVCGYRTAYKAHLLRHMRKHASEK 233
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CD+ T ++ H H G+K FKC C Y A +K L H+ N
Sbjct: 291 YCCDHCDFSTSWKSSLDQHMAKHTGEKPFKCDQCDYSAVRKIYLDKHLAN 340
>gi|260787805|ref|XP_002588942.1| hypothetical protein BRAFLDRAFT_89132 [Branchiostoma floridae]
gi|229274114|gb|EEN44953.1| hypothetical protein BRAFLDRAFT_89132 [Branchiostoma floridae]
Length = 216
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H GDK +KC C Y A QK L H+
Sbjct: 133 YMCGECGYKTTLKSDLSRHMRTHTGDKPYKCDQCDYSAAQKSHLDSHL 180
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A +K+ L H+
Sbjct: 77 YMCGECGYRTAKKSHLSIHMRTHSGEKPYKCDQCDYSAARKDSLDQHL 124
>gi|296200602|ref|XP_002747651.1| PREDICTED: zinc finger protein 335 isoform 2 [Callithrix jacchus]
Length = 1190
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 469 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 522
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 458 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 502
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 503 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 556
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 925 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 975
>gi|260823046|ref|XP_002603994.1| hypothetical protein BRAFLDRAFT_71717 [Branchiostoma floridae]
gi|229289319|gb|EEN60005.1| hypothetical protein BRAFLDRAFT_71717 [Branchiostoma floridae]
Length = 517
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 14/104 (13%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + +L LM+H+ P ++C C + T
Sbjct: 287 HMRTHTGQKPYKCDQCNYSAAQKSSLDQHLMKHTGEKP-----------YMCGECGHRTT 335
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H IH G+K +KC C Y A QK H+ KH+++
Sbjct: 336 TKSDLSRHMRIHTGEKPYKCDQCDYSAAQKVNFDAHIAAKHTSE 379
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C T+ NL +R K F C CDY + H + H
Sbjct: 437 PYMCGECGYRTARKSNLSRH--------MRTHSGKKPFKCNQCDYSAAQKCTLDRHVMTH 488
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K F C C YG + KL H++
Sbjct: 489 TGEKPFMCGECGYGTADRSKLSRHMR 514
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 14/96 (14%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTII 98
M P C HC +L L +HS N P ++C C Y T
Sbjct: 92 MRTHTGEKPYKCDHCDYSAVQKSSLDHHLAKHSGNKP-----------YMCGQCVYSTAR 140
Query: 99 SQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H IH GDK +KC CSY A K L H+
Sbjct: 141 KNDLSVHIRIHTGDKPYKCDQCSYSAAVKSTLDQHL 176
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G++++KC C Y A QK L H+
Sbjct: 382 YMCGECGYRTAGRSTLSRHMRTHTGERRYKCDQCDYSAMQKGDLDKHL 429
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
IGH +T + P C C + ++D + L H ++ + ++C
Sbjct: 228 LIGHQKT------HSGEKPYMCGEC-GYRTADRSTLSRH-------MKIHSGEKPYMCGE 273
Query: 92 CDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C Y N+ H H G K +KC C+Y A QK L H+
Sbjct: 274 CGYRAAYKYNLSQHMRTHTGQKPYKCDQCNYSAAQKSSLDQHL 316
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C + N+ H H GDK +KC C Y A +K L H K
Sbjct: 185 YMCGECGFRAAQKSNLSRHMRTHTGDKPYKCDQCEYSAVKKHHLIGHQK 233
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Query: 47 SVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
S P C C + ++ + L H +R + ++ C CDY + ++ H
Sbjct: 378 SEKPYMCGEC-GYRTAGRSTLSRH-------MRTHTGERRYKCDQCDYSAMQKGDLDKHL 429
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
H G+K + C C Y +K L H++ HS K
Sbjct: 430 ATHTGEKPYMCGECGYRTARKSNLSRHMRT-HSGK 463
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + + H G+K +KC C Y A QK L H+ KHS
Sbjct: 73 YMCGECGYRTSQRSKLSRYMRTHTGEKPYKCDHCDYSAVQKSSLDHHLA-KHS 124
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T + H IH G+K + C C Y A K L H++
Sbjct: 241 YMCGECGYRTADRSTLSRHMKIHSGEKPYMCGECGYRAAYKYNLSQHMR 289
>gi|260806115|ref|XP_002597930.1| hypothetical protein BRAFLDRAFT_221263 [Branchiostoma floridae]
gi|229283200|gb|EEN53942.1| hypothetical protein BRAFLDRAFT_221263 [Branchiostoma floridae]
Length = 266
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++++ L +H V+P + C C Y N+R H L H
Sbjct: 44 PYQCDRC-AYSAAQKGTLKQHISAVHDKVKP------YRCEVCGYSAGFKCNLRQHMLTH 96
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
G+K ++C C + A QK L HV+ KH
Sbjct: 97 SGEKPYRCDQCPFAANQKAHLTQHVQAKH 125
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+ C ACDY T+ ++ H H GD+ +KC C+Y A Q ++ H+ +H T+V+
Sbjct: 187 YQCGACDYGTVSLSKLKQHVATHTGDRPYKCGHCAYTAIQMGNMKRHILVQH-TRVR 242
>gi|260782884|ref|XP_002586510.1| hypothetical protein BRAFLDRAFT_106413 [Branchiostoma floridae]
gi|229271625|gb|EEN42521.1| hypothetical protein BRAFLDRAFT_106413 [Branchiostoma floridae]
Length = 735
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F+C C Y T++ ++ H H G+K +KC C Y A QK L H++
Sbjct: 510 FMCGQCGYRTVVRSHLSRHMRTHTGEKPYKCDQCDYSAAQKSTLDSHLR 558
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T + + H L+H G+K +KC C Y A +K L H+
Sbjct: 144 FMCGECGYRTPYKRYLSRHMLVHTGEKPYKCDQCDYSAARKSNLDSHL 191
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 20/116 (17%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCM-----------------VRP 80
+M P C HC S L + +H+ + P M +R
Sbjct: 584 HMRTHTGEKPYKCDHCDYSASEKATLNSHVAKHTGDEPFMCGECGYRTAVKSRLSMHMRT 643
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ + C CDY N+ NH L H G+K + C C Y +K L H++
Sbjct: 644 HTGERPYKCDQCDYSAAHKSNLDNHLLKHTGEKPYMCGECGYRTTRKSHLSLHMRR 699
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + +H H GDK F C C Y A QK L H++
Sbjct: 538 YKCDQCDYSAAQKSTLDSHLRKHTGDKPFMCGECGYRAVQKSALSIHMR 586
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
K +++C C Y T N+ H H G+K +KC C Y A + L H
Sbjct: 340 KKRYVCGDCGYRTRWKHNLSQHMRTHSGEKPYKCDQCDYSARNRSGLDNH 389
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 34/80 (42%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K + + M H +R + + C CDY + ++ +H L H GDK +
Sbjct: 198 KPYMCGECGYRMAHKSQLTKHMRAHTGEKPYKCDHCDYSAALKSSLDSHLLKHTGDKPYM 257
Query: 117 CCLCSYGAYQKEKLQFHVKN 136
C C Y A ++ L H++
Sbjct: 258 CGECGYRATRRFYLSQHMRR 277
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 20/114 (17%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCM-----------------VRP 80
+M + P C C + NL L HS+ P M +R
Sbjct: 18 HMRTHTGIKPYKCDQCDYSAAQKSNLDSHLANHSDEKPFMCEECGFRTGHRRHLSRHMRT 77
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ ++C C+Y TI ++ H H G+ + C C Y A QK L+ H+
Sbjct: 78 HTAEKPYMCGECEYKTIQKCDLSRHMRTHTGENLYMCGQCDYSAAQKCTLESHL 131
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L H +R F+C C Y +
Sbjct: 528 HMRTHTGEKPYKCDQC-DYSAAQKSTLDSH-------LRKHTGDKPFMCGECGYRAVQKS 579
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K +KC C Y A +K L HV
Sbjct: 580 ALSIHMRTHTGEKPYKCDHCDYSASEKATLNSHV 613
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
++C C Y + + H + H G+K +KC C + A QK +H+ N + + D
Sbjct: 399 YMCGECGYRALFHSTLSKHMMTHTGEKPYKCDQCDFSAAQK----YHLDNHRAKHIGD 452
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L++H+ P ++C C Y T
Sbjct: 640 HMRTHTGERPYKCDQCDYSAAHKSNLDNHLLKHTGEKP-----------YMCGECGYRTT 688
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K ++C C Y A +K L+ H+
Sbjct: 689 RKSHLSLHMRRHTGEKPYRCDQCDYSATKKSTLKNHL 725
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ +H L H G+K + C C Y K +L H++
Sbjct: 172 YKCDQCDYSAARKSNLDSHLLKHTGEKPYMCGECGYRMAHKSQLTKHMR 220
>gi|410900318|ref|XP_003963643.1| PREDICTED: zinc finger protein 64 homolog, isoforms 1 and 2-like
[Takifugu rubripes]
Length = 624
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CD I+ +++ H IH G+K +KC C Y K L+ HV+ KHST+
Sbjct: 205 FQCQQCDAKFKINSDLKRHVRIHSGEKPYKCDFCDYRCAMKGNLKSHVQIKHSTE 259
>gi|260810839|ref|XP_002600130.1| hypothetical protein BRAFLDRAFT_204295 [Branchiostoma floridae]
gi|229285416|gb|EEN56142.1| hypothetical protein BRAFLDRAFT_204295 [Branchiostoma floridae]
Length = 288
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ P +C+ C T++ L + + P IC C Y +
Sbjct: 160 HMAKHTGEKPYACQLCSFRTANKQGLALHVRRH----TGEKPYHSPNICKECGYKAAYKK 215
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++ H IH G+K +KC C Y + QK L H+ KH+ K+
Sbjct: 216 DLDKHMRIHTGEKPYKCDQCDYSSAQKSGLNRHIITKHTGKL 257
>gi|261289703|ref|XP_002604828.1| hypothetical protein BRAFLDRAFT_206424 [Branchiostoma floridae]
gi|229290156|gb|EEN60838.1| hypothetical protein BRAFLDRAFT_206424 [Branchiostoma floridae]
Length = 229
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ +C C Y T NMR H +IH G+K +KC C Y + + L+ H+K
Sbjct: 175 RHLCDQCGYRTANPSNMRTHKMIHTGEKPYKCDACGYRSNSRWNLKTHMK 224
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 50 PQSCKHCKNFTSSDVNLLM----EHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
P C HC ++ + + N L H+++ P ++C C Y + + H
Sbjct: 34 PHKCPHC-DYAAMNKNTLATHIARHTDDRP-----------YVCEECGYRAVTQSILNKH 81
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
IH G+K FKC C Y A ++ +L H+
Sbjct: 82 VQIHTGEKPFKCSECDYKARKRSQLNSHM 110
>gi|441639395|ref|XP_003253484.2| PREDICTED: zinc finger protein 335 [Nomascus leucogenys]
Length = 1288
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 566 RFKCEFCEFVCEDKKVLLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 619
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D +L+ H + V P K C
Sbjct: 555 LLTHIQAVANRRF-------KCEFCE-FVCEDKKVLLNHQLS---HVSDKPFK----CSF 599
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 600 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 653
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 1023 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 1073
>gi|260791351|ref|XP_002590703.1| hypothetical protein BRAFLDRAFT_89507 [Branchiostoma floridae]
gi|229275899|gb|EEN46714.1| hypothetical protein BRAFLDRAFT_89507 [Branchiostoma floridae]
Length = 151
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+IC C Y + N+ H H G+K +KC C Y A K L +H+ N
Sbjct: 85 YICGECGYRSAYKGNLSKHMRTHTGEKPYKCDQCDYSAADKSALGYHLAN 134
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY +++ H +IH G+K + C C Y + K L H++
Sbjct: 57 YKCDQCDYSAAQKASLKQHLVIHTGEKPYICGECGYRSAYKGNLSKHMR 105
>gi|443726242|gb|ELU13484.1| hypothetical protein CAPTEDRAFT_183548 [Capitella teleta]
Length = 178
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
F C CDY + N++ H IH GDK FKC C+ QK L H++ H
Sbjct: 121 FKCELCDYASTHKSNLQEHLRIHTGDKPFKCPHCTKRTTQKGSLNRHIRLAH 172
>gi|156385002|ref|XP_001633421.1| predicted protein [Nematostella vectensis]
gi|156220490|gb|EDO41358.1| predicted protein [Nematostella vectensis]
Length = 384
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 62 SDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCS 121
S +LL +HS ++ ++KF C CD ++R+H IH G++ FKC +CS
Sbjct: 152 SRASLLKQHS-----VIHQGNKRFKFKCDVCDKMFRTRSHLRDHVRIHTGERPFKCHICS 206
Query: 122 YGAYQKEKLQFHV 134
Q L+ H+
Sbjct: 207 RAFKQSSDLKKHI 219
>gi|260801933|ref|XP_002595849.1| hypothetical protein BRAFLDRAFT_283436 [Branchiostoma floridae]
gi|229281098|gb|EEN51861.1| hypothetical protein BRAFLDRAFT_283436 [Branchiostoma floridae]
Length = 290
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M V P C C ++TS L H+ + +P C CDY T
Sbjct: 110 HMRIHTGVKPYKCSQC-DYTSRYKRSLNVHTRHAHTGEKP------HKCPDCDYKTAQKP 162
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
N+ H H G+K +KC LC + A K+ L FH
Sbjct: 163 NLIRHLRKHTGEKPYKCQLCDFTASTKQNLDFH 195
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 14/93 (15%)
Query: 50 PQSCKHCK--NFTSSDVNLLM-EHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C HC+ SDV++ M H+ P F+C C + T + H
Sbjct: 63 PYKCPHCEYTGAAKSDVDIHMVRHTGELP-----------FMCGECGFRTGHKSTLVVHM 111
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
IH G K +KC C Y + K L H ++ H+
Sbjct: 112 RIHTGVKPYKCSQCDYTSRYKRSLNVHTRHAHT 144
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 17/122 (13%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
C Y ++Y S ++V H T P C C T+ NL+
Sbjct: 125 CDYTSRYKRS-LNVHTRHAHT--------GEKPHKCPDCDYKTAQKPNLIRH-------- 167
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+R + + C CD+ QN+ H++ H G + C +C Y ++ H +
Sbjct: 168 LRKHTGEKPYKCQLCDFTASTKQNLDFHSVKHTGITPYLCEVCGYKTANRQHFDIHTTRR 227
Query: 138 HS 139
HS
Sbjct: 228 HS 229
>gi|189528266|ref|XP_001922907.1| PREDICTED: RE1-silencing transcription factor [Danio rerio]
Length = 854
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
C C Y T N + H +H+ +QF C +C Y A +K LQ+H+K++H
Sbjct: 351 CPYCQYKTADRSNFKKHVELHVNPRQFLCPVCKYAASKKCNLQYHIKSRH 400
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
F C+ C+Y + ++ H H G++ FKC CSY A + ++ H + H
Sbjct: 292 FQCIYCEYSSSQKTHLTRHMRTHSGERPFKCDNCSYLAANQHEVTRHARQVH 343
>gi|323652508|gb|ADX98506.1| RE1-silencing transcription factor [Danio rerio]
Length = 854
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
C C Y T N + H +H+ +QF C +C Y A +K LQ+H+K++H
Sbjct: 351 CPYCQYKTADRSNFKKHVELHVNPRQFLCPVCKYAASKKCNLQYHIKSRH 400
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
F C+ C+Y + ++ H H G++ FKC CSY A + ++ H + H
Sbjct: 292 FQCIYCEYSSSQKTHLTRHMRTHSGERPFKCDNCSYLAANQHEVTRHARQVH 343
>gi|119361502|sp|Q2EI20.1|REST_DANRE RecName: Full=RE1-silencing transcription factor; AltName:
Full=Neural-restrictive silencer factor
gi|87204325|gb|ABD32118.1| RE-1 silencer of transcription [Danio rerio]
Length = 855
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
C C Y T N + H +H+ +QF C +C Y A +K LQ+H+K++H
Sbjct: 349 LSCPYCQYKTADRSNFKKHVELHVNPRQFLCPVCKYAASKKCNLQYHIKSRH 400
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
F C+ C+Y + ++ H H G++ FKC CSY A + ++ H + H
Sbjct: 292 FQCIYCEYSSSQKTHLTRHMRTHSGERPFKCDNCSYLAANQHEVTRHARQVH 343
>gi|260815761|ref|XP_002602641.1| hypothetical protein BRAFLDRAFT_225255 [Branchiostoma floridae]
gi|229287952|gb|EEN58653.1| hypothetical protein BRAFLDRAFT_225255 [Branchiostoma floridae]
Length = 242
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 15/94 (15%)
Query: 50 PQSCKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
P C HC++ S D +L +H+ P F+C C Y + + + H
Sbjct: 160 PYKCDHCEHSARSRSALDYHLKTKHTGQKP-----------FMCGICGYGSALKYGLIRH 208
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
IH G+K +KC C + A K L H K KH+
Sbjct: 209 MRIHTGEKPYKCDRCDFSAAWKSNLDNHCKTKHN 242
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 14/105 (13%)
Query: 34 GHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICV 90
G + C +M P C C + L L +HS + P ++C
Sbjct: 31 GKSKLCRHMRTHTGEKPYKCYQCDYSATQKCTLDRHLAKHSGDKP-----------YMCG 79
Query: 91 ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C Y T + + H H G+K +KC C Y +K L H++
Sbjct: 80 ECGYRTTLKSTLSKHMRTHTGEKPYKCDQCGYSVARKYHLSQHMR 124
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CDY N+ H L H +K +KC C + A + L +H+K KH+
Sbjct: 132 YKCDQCDYSAAKKSNLDQHHLSKHTKEKPYKCDHCEHSARSRSALDYHLKTKHT 185
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+IC C Y T + H H G+K +KC C Y A QK L H+ KHS
Sbjct: 20 YICEECGYRTDGKSKLCRHMRTHTGEKPYKCYQCDYSATQKCTLDRHL-AKHS 71
>gi|260808997|ref|XP_002599293.1| hypothetical protein BRAFLDRAFT_196136 [Branchiostoma floridae]
gi|229284570|gb|EEN55305.1| hypothetical protein BRAFLDRAFT_196136 [Branchiostoma floridae]
Length = 357
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F C C Y T I N+ H +H GDK +KC C Y A QK L H+
Sbjct: 159 RFECKECGYKTHIRSNLNRHMTMHTGDKPYKCDQCDYSAAQKCSLDVHL 207
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F+C C Y T ++ H IH DK +KC C Y A K L HV KH+ K
Sbjct: 103 FVCGECGYRTANKSDLYRHERIHATDKPYKCNFCDYSAAVKSTLDIHVA-KHTGKT 157
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C C++ T N+ H H GDK +KC C Y A +K L+ H + KH+
Sbjct: 47 FTCGECEFKTHRRSNLARHVRTHTGDKPYKCDQCDYSAARKFSLELH-RAKHT 98
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC+ C + T N+ H H +K +KC LC Y A +K L H+
Sbjct: 301 YICIECGFSTHGKPNLSQHMRTHTVNKPYKCDLCDYSAARKSHLDSHL 348
>gi|10438918|dbj|BAB15379.1| unnamed protein product [Homo sapiens]
Length = 829
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 107 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 160
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 96 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 140
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H++ ++
Sbjct: 141 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHASSFEE 194
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C LC + L+FH++ HS
Sbjct: 564 CSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKFHIQRLHS 614
>gi|260823022|ref|XP_002603982.1| hypothetical protein BRAFLDRAFT_71730 [Branchiostoma floridae]
gi|229289307|gb|EEN59993.1| hypothetical protein BRAFLDRAFT_71730 [Branchiostoma floridae]
Length = 703
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + +L LM+HS P ++C C Y T
Sbjct: 417 HMRTHTGEKPYKCDRCDYSAAQKGHLNQHLMKHSGEKP-----------YMCGKCGYRTA 465
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
Q++ H H G+K +KC C Y A QK L HV
Sbjct: 466 QKQHLSQHLRTHTGEKPYKCDKCDYSAAQKSTLDQHV 502
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 15/93 (16%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + L LM+HS + P ++C C Y T N+ H
Sbjct: 594 PYKCDQCDYAAAQKGTLDQHLMKHSGDKP-----------YMCGECGYRTAQRTNLSQHL 642
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G+K +KC C Y A QK+ L H + +HS
Sbjct: 643 RTHTGEKPYKCDQCDYSAAQKQHLIDH-QTRHS 674
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C +C Y T ++ H IH G+K +KC C Y A K L+ HV
Sbjct: 511 YMCGSCGYRTAKKSHLTEHVRIHTGEKPYKCDRCDYSAATKTALKQHV 558
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++C C Y ++ H H G+K +KC C Y A QK L HV N H+ K+
Sbjct: 194 YMCGVCGYRAAQKSHLSAHMRTHTGEKPYKCYQCDYSAAQKGTLDDHVAN-HTAKL 248
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A QK L H+
Sbjct: 567 YLCGECGYRTAQKSHLSKHMRKHTGEKPYKCDQCDYAAAQKGTLDQHL 614
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++ + L EH VR + + C CDY ++ H IH
Sbjct: 510 PYMCGSC-GYRTAKKSHLTEH-------VRIHTGEKPYKCDRCDYSAATKTALKQHVAIH 561
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K + C C Y QK L H++
Sbjct: 562 TGEKPYLCGECGYRTAQKSHLSKHMR 587
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C T+ NL L H+ P + C CDY Q++ +H
Sbjct: 622 PYMCGECGYRTAQRTNLSQHLRTHTGEKP-----------YKCDQCDYSAAQKQHLIDHQ 670
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K + C C Y A Q+ L H+K
Sbjct: 671 TRHSGEKPYMCEKCGYRAAQRSTLSQHMK 699
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
M P C C N+++S + L +H V + ++C C Y
Sbjct: 361 RMRTHTGEKPFKCDQC-NYSASRKSHLEQH-------VAKHTGEKPYMCGECGYRATEKS 412
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC C Y A QK L H+
Sbjct: 413 DLSVHMRTHTGEKPYKCDRCDYSAAQKGHLNQHL 446
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H + H G+K + C C Y QK+ L H++
Sbjct: 427 YKCDRCDYSAAQKGHLNQHLMKHSGEKPYMCGKCGYRTAQKQHLSQHLR 475
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C+Y ++ H H G+K + C C Y A +K L H++
Sbjct: 371 FKCDQCNYSASRKSHLEQHVAKHTGEKPYMCGECGYRATEKSDLSVHMR 419
>gi|241048569|ref|XP_002407297.1| gonadotropin inducible transcription factor, putative [Ixodes
scapularis]
gi|215492177|gb|EEC01818.1| gonadotropin inducible transcription factor, putative [Ixodes
scapularis]
Length = 249
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 44 FLN-SVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNM 102
F+N +V P C C + ++ L + +R + F C C+Y T ++
Sbjct: 128 FINWTVKPYVCSFCGHMSARKAMLQLH--------LRQHTGEKPFACHQCEYRTGDHNSL 179
Query: 103 RNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
R H + H G K +KC C Y Q + H+KNKH
Sbjct: 180 RRHKMRHTGTKPYKCPHCPYACIQAISYKMHMKNKH 215
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 48 VIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL 107
V P C C + ++ L + +R + F C C+Y T ++R H +
Sbjct: 48 VKPYVCSFCGHMSARKAMLQLH--------LRQHTGEKPFACHQCEYRTGDHNSLRRHKM 99
Query: 108 IHLGDKQFKCCLCSYGAYQKEKLQ 131
H G K +KC C Y Q +Q
Sbjct: 100 RHTGTKPYKCPHCPYACIQVSAMQ 123
>gi|260832648|ref|XP_002611269.1| hypothetical protein BRAFLDRAFT_210741 [Branchiostoma floridae]
gi|229296640|gb|EEN67279.1| hypothetical protein BRAFLDRAFT_210741 [Branchiostoma floridae]
Length = 422
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 47 SVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
V P C C +++++ N L H + +P F+C C Y T ++ H
Sbjct: 5 GVKPYKCDQC-DYSAARKNQLERH-KAIHTGEKP------FMCGECGYRTARKSDLSRHM 56
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H GDK + C C Y A +KE L H K KH+
Sbjct: 57 MKHTGDKPYNCDQCDYSAARKENLDRH-KAKHT 88
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y T ++ H + H GDK +KC C Y + K L+ H
Sbjct: 149 YICGECGYRTARKSDLSRHMMKHTGDKPYKCDQCDYSSTDKGCLKKHT 196
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++S+D L +H+ + ++ + + C CDY ++ H H
Sbjct: 176 PYKCDQC-DYSSTDKGCLKKHTSSLATHIKKHTGEKPYKCDQCDYSAAEKSSLDRHMPRH 234
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K + C C + + L H+++
Sbjct: 235 TGEKPYMCGECGFRTSARFSLTVHMRS 261
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G K +KC LC Y A QK L H+
Sbjct: 93 YMCGECGYRTADRSALTVHMRKHTGVKPYKCDLCDYSATQKGDLDKHM 140
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C T+ +L +M+H+ + P + C CDY +N+ H
Sbjct: 36 PFMCGECGYRTARKSDLSRHMMKHTGDKP-----------YNCDQCDYSAARKENLDRHK 84
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K + C C Y + L H++
Sbjct: 85 AKHTGEKPYMCGECGYRTADRSALTVHMR 113
>gi|260815008|ref|XP_002602205.1| hypothetical protein BRAFLDRAFT_216782 [Branchiostoma floridae]
gi|229287512|gb|EEN58217.1| hypothetical protein BRAFLDRAFT_216782 [Branchiostoma floridae]
Length = 629
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C T+ + + H V + K +C C Y +++ ++ H H
Sbjct: 264 PYMCGECGYRTAKNRGSMGRH-------VVKNTGKKPHMCGECGYSSVLRSDLSRHMRTH 316
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K +KC C Y A +K KL H+K
Sbjct: 317 TGEKPYKCEECDYSAAEKSKLDLHMK 342
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
++++++ + L++H +R + ++C C + T N+ H H G+K +KC
Sbjct: 440 DYSATEKSTLIKH-------IRKHTGEKPYMCGECGHRTADKGNLSRHMRTHTGEKPYKC 492
Query: 118 CLCSYGAYQKEKLQFHV 134
C Y A ++ L H+
Sbjct: 493 DQCDYAAARRFNLDQHI 509
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T ++ H H GDK +KC C Y A +K L H++
Sbjct: 406 YMCEKCGYRTARRSDLSQHMRTHTGDKCYKCDQCDYSATEKSTLIKHIR 454
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + N+ H H G K + C C Y A +K +L H++
Sbjct: 181 YKCDQCDYSAVTKSNLHQHQSKHTGKKPYNCGDCGYKAARKSELSRHMR 229
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
++C C Y T Q++ H H G ++F C LC Y QK L
Sbjct: 518 YMCGECGYRTAQRQHLSRHMRTHTGKRRFMCNLCGYSTSQKHHL 561
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 3/99 (3%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
C +M P C C + L H V + +F+C C Y
Sbjct: 49 CDVSRHMRTHTGEKPYKCDLCDYSAAVKSTLTQHHQAKHTAGVAGEK---RFMCEKCGYR 105
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
T ++ H H G+K +C C Y A +K L H+
Sbjct: 106 TAHKTHLSRHLRTHTGEKPHRCDQCDYSASEKRSLDIHL 144
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
F+C C Y T + H IH G++ +KC C Y A K L H
Sbjct: 350 FMCGDCGYRTTTKSTLSRHMRIHTGERPYKCDQCDYSAAVKSTLAKH 396
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y + HT H G+K FKC C++ QK HV+
Sbjct: 574 YMCGECGYRAAKRSTLSKHTRTHTGEKPFKCDQCAFSTAQKFSFNRHVR 622
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++C C Y ++ H H G+K +KC LC Y A K L H + KH+ V
Sbjct: 36 YMCGECGYRAGNKCDVSRHMRTHTGEKPYKCDLCDYSAAVKSTLTQHHQAKHTAGV 91
>gi|171474909|gb|ACB47395.1| brother of regulator of imprinted sites [Macropus eugenii]
Length = 607
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F CCLCSY + KL+ H++ K
Sbjct: 298 FKCSMCKYASVEASKLKRHMRSHTGERPFHCCLCSYASKDTYKLKRHMRTHSGEK 352
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H +R + F C C Y + + ++ H H
Sbjct: 297 PFKCSMCK-YASVEASKLKRH-------MRSHTGERPFHCCLCSYASKDTYKLKRHMRTH 348
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 349 SGEKPYECYICHARFTQSGTMKMHILQKHSENV 381
>gi|449472476|ref|XP_002196108.2| PREDICTED: transcriptional repressor CTCF [Taeniopygia guttata]
Length = 644
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 373 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 427
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 372 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 423
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 424 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 456
>gi|260789926|ref|XP_002589995.1| hypothetical protein BRAFLDRAFT_224793 [Branchiostoma floridae]
gi|229275182|gb|EEN46006.1| hypothetical protein BRAFLDRAFT_224793 [Branchiostoma floridae]
Length = 281
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 51 QSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
+ C + FTS +H+ + P ++C+ C Y T ++ H H
Sbjct: 147 EECGYRTAFTSDLTRHRRKHTGDKP-----------YVCMECGYRTGFRSSLSRHMRTHT 195
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y A +K L+ HV KH+
Sbjct: 196 GEKPYKCDRCDYSAAEKGDLKQHVMVKHT 224
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 18/137 (13%)
Query: 3 HWEQCLLVPLSTKK--TCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFT 60
H +Q +L+ S KK C C Y S V H M + V P C C +F+
Sbjct: 72 HIDQHVLLKHSNKKPFMCDECG-YTTSTKFVLFRH------MKKHSGVKPYRCDQC-DFS 123
Query: 61 SSDVNLLMEHSENCPCMVRPDPVKYK-FICVACDYFTIISQNMRNHTLIHLGDKQFKCCL 119
++ L +H VR + K ++C C Y T + ++ H H GDK + C
Sbjct: 124 TARKESLTQH-------VRANHTGEKPYLCEECGYRTAFTSDLTRHRRKHTGDKPYVCME 176
Query: 120 CSYGAYQKEKLQFHVKN 136
C Y + L H++
Sbjct: 177 CGYRTGFRSSLSRHMRT 193
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 24/54 (44%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
C C Y + H H G+K +KC C Y A QK + HV KHS K
Sbjct: 31 TCGECGYKARFRSQLIRHMRKHTGEKPYKCEQCEYTAAQKGHIDQHVLLKHSNK 84
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 17/95 (17%)
Query: 50 PQSCKHCKNFTSS-----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRN 104
P C+ C+ +T++ D ++L++HS P F+C C Y T +
Sbjct: 57 PYKCEQCE-YTAAQKGHIDQHVLLKHSNKKP-----------FMCDECGYTTSTKFVLFR 104
Query: 105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H H G K ++C C + +KE L HV+ H+
Sbjct: 105 HMKKHSGVKPYRCDQCDFSTARKESLTQHVRANHT 139
>gi|345330174|ref|XP_001512216.2| PREDICTED: zinc finger protein 518B [Ornithorhynchus anatinus]
Length = 1158
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 81 DPVKYK----------FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
DP++YK FIC C++ + + H + H G +KC CSYGA + + +
Sbjct: 155 DPLQYKKHMIQHEEIQFICSHCNHISYTKGEFQRHLVKHTGTFPYKCEYCSYGAIRNDYI 214
Query: 131 QFHVKNKHST 140
H + H T
Sbjct: 215 VKHTRRVHET 224
>gi|148237145|ref|NP_001079930.1| CCCTC-binding factor (zinc finger protein) [Xenopus laevis]
gi|34785484|gb|AAH57697.1| Ctcf protein [Xenopus laevis]
Length = 735
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 349 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 403
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 348 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 399
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 400 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 432
>gi|11878220|gb|AAG40852.1|AF305695_1 transcriptional repressor [Xenopus laevis]
Length = 735
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 349 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 403
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 348 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 399
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 400 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 432
>gi|260781019|ref|XP_002585626.1| hypothetical protein BRAFLDRAFT_111669 [Branchiostoma floridae]
gi|229270644|gb|EEN41637.1| hypothetical protein BRAFLDRAFT_111669 [Branchiostoma floridae]
Length = 509
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y I ++ H H G++ +KC C Y A K L +H+ KH+
Sbjct: 206 YMCGECGYRAAIKSDLSRHMRTHTGERPYKCVQCDYSAAVKSTLDWHIAAKHT 258
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 53 CKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
C HC+ + NL L +H+ P ++C C Y T + + H H
Sbjct: 376 CDHCEYSATWKSNLDRHLAKHTGEKP-----------YMCGECGYRTSLKSTLSIHMRTH 424
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
GDK FKC C Y A Q+ L HV
Sbjct: 425 TGDKPFKCDQCDYSAAQRCSLDSHV 449
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 14/90 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C HC + +L L +H+ P ++C C Y T ++ H
Sbjct: 37 PYMCDHCDYSAAHKASLNFHLAKHTGEKP-----------YMCGECGYRTAHKADLSKHM 85
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
H G+K +KC C Y A +K L H++
Sbjct: 86 RTHTGEKPYKCDQCDYSAARKSHLSAHMRT 115
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY ++ +H + H GDK + C C Y A K L FH+
Sbjct: 10 YKCDQCDYSATQKSSLDSHLVKHTGDKPYMCDHCDYSAAHKASLNFHL 57
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ CV CDY + + H H GDK + C C Y A QK L H++
Sbjct: 234 YKCVQCDYSAAVKSTLDWHIAAKHTGDKPYMCGECGYRAAQKSHLAEHMRT 284
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 14/96 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P +C C + NL L +H+ P ++C C Y
Sbjct: 112 HMRTHTGQKPYTCDQCDYSAAQKFNLDQHLTKHNGEKP-----------YMCGECGYRAA 160
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+ H+ H G+K ++C C Y A +K L H
Sbjct: 161 QKLTLSKHSRTHTGEKPYRCDQCDYAAARKSDLDKH 196
>gi|260824687|ref|XP_002607299.1| hypothetical protein BRAFLDRAFT_88249 [Branchiostoma floridae]
gi|229292645|gb|EEN63309.1| hypothetical protein BRAFLDRAFT_88249 [Branchiostoma floridae]
Length = 174
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
F+C C Y T + NH H G+K +KC LC Y A +K L H
Sbjct: 10 FMCGECGYRTTKKSGLSNHMRTHTGEKPYKCDLCDYSAAEKSNLNAH 56
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
F+C C Y T + H H G+K +KC LC Y A QK L H
Sbjct: 122 FMCGECGYRTTTKSCLSKHMRTHTGEKPYKCDLCDYSAAQKCNLDVH 168
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY N+ H L H G+K +KC C Y + L H+K
Sbjct: 38 YKCDLCDYSAAEKSNLNAHRLKHTGEKPYKCGECEYRTANRCHLSNHMKR 87
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F+C C Y T+ ++ H +H G+K F C C Y K L H++
Sbjct: 94 FMCGECGYRTVKKCDLSRHMSVHTGEKPFMCGECGYRTTTKSCLSKHMR 142
>gi|301605889|ref|XP_002932573.1| PREDICTED: hypothetical protein LOC100498615 [Xenopus (Silurana)
tropicalis]
Length = 975
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
K ++ C C+Y + + NH L H+ DK FKC C Y Y+++ L H+ KH+
Sbjct: 831 KSRYKCEFCEYICGDRKQLLNHQLTHMNDKPFKCSQCKYHTYRQDFLLSHMATKHA 886
>gi|182765460|ref|NP_001116829.1| transcriptional repressor CTCF [Ornithorhynchus anatinus]
gi|171474903|gb|ACB47392.1| CCCTC-binding factor [Ornithorhynchus anatinus]
Length = 728
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|348523553|ref|XP_003449288.1| PREDICTED: transcriptional repressor CTCF-like [Oreochromis
niloticus]
Length = 831
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 408 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 462
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 407 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 458
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 459 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 491
>gi|260806374|ref|XP_002598059.1| hypothetical protein BRAFLDRAFT_85726 [Branchiostoma floridae]
gi|229283330|gb|EEN54071.1| hypothetical protein BRAFLDRAFT_85726 [Branchiostoma floridae]
Length = 406
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C+ C + +L L +HS N P M C C Y T+
Sbjct: 229 HMRIHTGDKPYKCEQCDYSAARKSSLDTHLAKHSGNKPHM-----------CGECGYRTM 277
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
N+ H H G+K FKC C Y A +K L H+ N
Sbjct: 278 EIHNLSRHMRTHTGEKPFKCDQCDYSAARKSSLDQHLAN 316
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y ++ H IH GDK +KC C Y A +K L H+ KHS
Sbjct: 211 YMCADCGYRATQMTDLSKHMRIHTGDKPYKCEQCDYSAARKSSLDTHLA-KHS 262
>gi|328726737|ref|XP_003249022.1| PREDICTED: zinc finger protein 227-like [Acyrthosiphon pisum]
Length = 492
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 75 PCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C +R + + C C+ +++ H IH+G+K FKC +C G YQ ++L+ HV
Sbjct: 172 KCHMRTHTAEKSYKCDICNKLYSRKDSLKTHKKIHIGEKTFKCDVCGKGFYQAQQLRGHV 231
Query: 135 K 135
+
Sbjct: 232 R 232
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F C CD + ++ H + H G+K FKC +C YQ L+ H++ K+
Sbjct: 352 FKCNICDSTYFRAHGLKVHKMTHTGEKPFKCDICDKRFYQTASLKVHMRTHTGEKL 407
>gi|395506129|ref|XP_003757388.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 335 [Sarcophilus
harrisii]
Length = 1394
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 22/101 (21%)
Query: 39 CPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTII 98
CP+ F++ + P+ H +++HS +RP C C + +
Sbjct: 1101 CPDCPFVSHLWPEVRAH-----------MVQHSS-----LRPHQ------CSQCSFASKN 1138
Query: 99 SQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+++R HTL H +K F C LC + L+FH++ HS
Sbjct: 1139 KKDLRRHTLTHTNEKPFSCHLCGQRFNRNGHLKFHIQRLHS 1179
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 655 RFKCEFCEFVCEDKKLLLNHQLSHVSDKPFKCNFCPYRTFREDFLLSHVAVKHT 708
Score = 42.0 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D LL+ H + V P K C
Sbjct: 644 LLTHIQAIANRRF-------KCEFCE-FVCEDKKLLLNHQLS---HVSDKPFK----CNF 688
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +HS ++
Sbjct: 689 CPYRTFREDFLLSHVAVKHTGAKPFACEFCHFTTRHKKNLRLHVRCRHSASFEE 742
>gi|395508337|ref|XP_003758469.1| PREDICTED: transcriptional repressor CTCF [Sarcophilus harrisii]
Length = 728
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|334313072|ref|XP_003339817.1| PREDICTED: transcriptional repressor CTCF-like [Monodelphis
domestica]
Length = 728
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|195148760|ref|XP_002015335.1| GL19648 [Drosophila persimilis]
gi|194107288|gb|EDW29331.1| GL19648 [Drosophila persimilis]
Length = 731
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 89 CVACDYFTIISQNMRNHTLIH----LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C Y T +MR H +H GDK FKC LC+Y + +K L+ HV +HS
Sbjct: 94 VTGCTYSTNRPYDMRRHLTVHNNPLRGDKAFKCLLCTYSSERKGNLRRHVDLRHS 148
>gi|171474901|gb|ACB47391.1| CCCTC-binding factor [Macropus eugenii]
Length = 728
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|432866187|ref|XP_004070728.1| PREDICTED: zinc finger protein 335-like [Oryzias latipes]
Length = 1631
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 28/54 (51%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
KF C CDY + + NH L H D+ FKC C Y ++E L H+ KH+
Sbjct: 981 KFKCEFCDYTCSNKKLLLNHQLSHTNDRPFKCDYCKYSTSKEEFLVSHLAIKHT 1034
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI-HLG 111
C+ C ++T S+ LL+ H + RP F C C Y T + + +H I H G
Sbjct: 984 CEFC-DYTCSNKKLLLNHQLS-HTNDRP------FKCDYCKYSTSKEEFLVSHLAIKHTG 1035
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+K F C +C + ++ L+ HV+ +H
Sbjct: 1036 EKPFSCDMCHFMTKHRKNLRLHVQCRH 1062
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C +C + + +++R H + H +K F C CS + L+FH++ H+
Sbjct: 1374 CSSCSFASKNKKDLRRHMMTHTNEKPFACKFCSQRFNRNGHLKFHMERLHN 1424
>gi|260806354|ref|XP_002598049.1| hypothetical protein BRAFLDRAFT_273236 [Branchiostoma floridae]
gi|229283320|gb|EEN54061.1| hypothetical protein BRAFLDRAFT_273236 [Branchiostoma floridae]
Length = 338
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C Y T+ ++ H H G+K +KC C Y A QK L HV KH+
Sbjct: 256 YKCGECGYRTVQKSHLSRHMRTHAGEKPYKCDQCDYSAAQKVHLDLHVAAKHT 308
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y T + H IH G+K +KC C Y A QK L H+ +H+
Sbjct: 171 FMCGECGYRTTTKSTLAIHMQIHTGEKPYKCDQCDYSATQKATLDNHIAAQHT 223
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T+ + H IH+ +K +KC C Y A QK L +H KH+
Sbjct: 57 YMCGECGYRTVQKSTLSIHMRIHIREKPYKCDQCDYSAKQKFHLDYHKAKKHN 109
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+C C Y ++ H H G++ +KC LC Y A QK L H+ KH+
Sbjct: 1 MCGECGYRAAQKASLSVHMRTHTGERPYKCDLCDYSATQKIILDNHIAAKHT 52
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ L H + V+ ++C C Y T
Sbjct: 189 HMQIHTGEKPYKCDQC-DYSATQKATLDNH------IAAQHTVEKPYMCGECGYRTSRKF 241
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ H H G+K +KC C Y QK L H++
Sbjct: 242 ALTRHMRTHAGEKPYKCGECGYRTVQKSHLSRHMRT 277
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T+ + H H G+K +KC C Y A K H+ KH+
Sbjct: 114 YMCGECGYRTVQRSELSIHMRTHTGEKPYKCDQCDYSAAVKVNSNNHIAAKHT 166
>gi|194902084|ref|XP_001980581.1| GG18045 [Drosophila erecta]
gi|190652284|gb|EDV49539.1| GG18045 [Drosophila erecta]
Length = 440
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 14/132 (10%)
Query: 10 VPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLME 69
VP TK C +C++ S HC + +N + C CK+ + + LL
Sbjct: 214 VPPDTKFVCDHCDEGFRSAA-ALTRHC------NIINLPLTHPCSKCKSKFHNQI-LLQT 265
Query: 70 HSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEK 129
H E CP P + +C C + N++NH + H G + KC CS Y +
Sbjct: 266 HKERCP-----RPAAAQHVCDICGKRLTTAFNLKNHLVRHAGTRPHKCGQCSASFYTAAE 320
Query: 130 LQFHVKNKHSTK 141
L H K H+T+
Sbjct: 321 LCSHQKT-HTTE 331
>gi|260823018|ref|XP_002603980.1| hypothetical protein BRAFLDRAFT_71732 [Branchiostoma floridae]
gi|229289305|gb|EEN59991.1| hypothetical protein BRAFLDRAFT_71732 [Branchiostoma floridae]
Length = 507
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 16/105 (15%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLL----MEHSENCPCMVRPDPVKYKFICVACDYFT 96
+M P C C N++++ + L M+H+ P ++C C + T
Sbjct: 298 HMRTHTGQKPYKCDQC-NYSAAQKSTLDQHLMKHTGEKP-----------YMCGECGHRT 345
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H IH G+K +KC C Y A QK H+ KH+++
Sbjct: 346 TTKSDLSRHMRIHTGEKPYKCDQCDYSAAQKVNFDAHIAAKHTSE 390
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C HC +L L +HS N P ++C C Y T ++ H
Sbjct: 111 PYKCDHCDYSAVQKSSLDHHLAKHSGNKP-----------YMCGECGYSTARKNDLSVHI 159
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
IH GDK +KC C Y A K L H+
Sbjct: 160 RIHTGDKPYKCDQCDYSAAVKSTLDQHL 187
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T + H H G++++KC C Y A QK L H+
Sbjct: 393 FMCGECGYRTADRSTLSRHMRTHTGERRYKCDQCDYSAVQKGDLDKHL 440
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C + T N+ H H G+K FKC C Y A QK L H+
Sbjct: 449 FMCGECGHRTARKSNLSRHMRTHSGEKPFKCNQCDYSAAQKCTLDRHI 496
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H + H G+K +KC C Y A QK L H+ KHS
Sbjct: 84 YMCGECGYRTSQRSKLSRHMITHTGEKPYKCDHCDYSAVQKSSLDHHLA-KHS 135
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y N+ H H G K +KC C+Y A QK L H+
Sbjct: 280 YMCGECGYRAAYKYNLSKHMRTHTGQKPYKCDQCNYSAAQKSTLDQHL 327
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C + N+ H H GDK +KC C Y A +K L H K
Sbjct: 196 YMCGECGFRAAQKSNLSRHMRTHTGDKPYKCDQCEYSAVEKHHLIGHQK 244
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 47 SVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
S P C C + ++D + L H +R + ++ C CDY + ++ H
Sbjct: 389 SEKPFMCGEC-GYRTADRSTLSRH-------MRTHTGERRYKCDQCDYSAVQKGDLDKHL 440
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K F C C + +K L H++
Sbjct: 441 ATHTGEKPFMCGECGHRTARKSNLSRHMR 469
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F+C C Y T + H IH G+K + C C Y A K L H++
Sbjct: 252 FMCGECGYRTADRSTLSRHMKIHSGEKPYMCGECGYRAAYKYNLSKHMR 300
>gi|22900830|gb|AAL86014.1| co-activator/regulatory zinc-finger protein NIF [Rattus norvegicus]
Length = 822
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK FKC C Y ++++ L HV KH+
Sbjct: 107 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 160
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 32 FIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVA 91
+ H Q N F C+ C+ F D L+ H + V P K C
Sbjct: 96 LLTHIQAVANRRF-------KCEFCE-FVCEDKKALLNHQLS---HVSDKPFK----CSF 140
Query: 92 CDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C Y T + +H + H G K F C C + K+ L+ HV+ +H+ ++
Sbjct: 141 CPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCRHANSFEE 194
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C + + +++R H L H +K F C +C + L+FH++ HS
Sbjct: 563 CNQCSFASKNKKDLRRHMLTHTNEKPFSCHVCGQRFNRNGHLKFHIQRLHS 613
>gi|260806241|ref|XP_002597993.1| hypothetical protein BRAFLDRAFT_196832 [Branchiostoma floridae]
gi|229283263|gb|EEN54005.1| hypothetical protein BRAFLDRAFT_196832 [Branchiostoma floridae]
Length = 135
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C+ C+Y TI +M NH H G+K F C C Y A +K +L+ HV + H+
Sbjct: 81 CLHCEYVTINKPDMTNHIRTHTGEKPFMCEQCDYSAARKHELKQHVLSVHT 131
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 87 FICVACDYFTIISQNMRNH-TLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CDY + ++ H +H G++ + C C Y A QK L+ H+
Sbjct: 14 FRCQQCDYSAAQTATLKQHIRAVHTGERPYHCGYCDYSATQKGALKRHM 62
>gi|260781017|ref|XP_002585625.1| hypothetical protein BRAFLDRAFT_111667 [Branchiostoma floridae]
gi|229270643|gb|EEN41636.1| hypothetical protein BRAFLDRAFT_111667 [Branchiostoma floridae]
Length = 611
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y T + N+ H H G+K FKC C Y A K L H+ N
Sbjct: 462 YMCRECGYRTYLRSNLSRHMRTHTGEKPFKCDQCDYSAGNKYSLDIHLAN 511
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++T++ + L +H M + K ++C C Y T
Sbjct: 74 HMRTHTGEKPYKCDQC-DYTAARKSYLDDH------MTKHSGEK-PYMCGECGYRTARKF 125
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
N+ H IH GDK +KC C Y A QK L H N
Sbjct: 126 NLSLHMRIHTGDKPYKCDQCDYSAAQKSTLVSHQAN 161
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T + ++ H IH G+K +KC C Y A +K L H+
Sbjct: 266 YKCGECGYRTALRSDLSKHARIHTGEKPYKCDQCDYAAARKSHLDDHL 313
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T + + H H G+K +KC C Y A QK L H+
Sbjct: 1 MCGECGYRTNLKSTLSKHMRTHTGEKPYKCDQCDYSAAQKANLDLHL 47
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L +H+ P ++C C Y T
Sbjct: 18 HMRTHTGEKPYKCDQCDYSAAQKANLDLHLTKHTGEKP-----------YMCGECGYRTA 66
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H G+K +KC C Y A +K L H+ KHS
Sbjct: 67 RKPDLSRHMRTHTGEKPYKCDQCDYTAARKSYLDDHM-TKHS 107
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A +K L H+
Sbjct: 406 YMCGECGYRTTQKAHLSRHMRTHTGEKPYKCDQCDYSAAEKSTLDQHL 453
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY ++ H H GDK +KC C Y A QK L H+K
Sbjct: 490 FKCDQCDYSAGNKYSLDIHLANHTGDKPYKCDDCDYSAAQKSDLDQHLK 538
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+Y +C C Y N+ H H G+K +KC C Y A +K L H+
Sbjct: 347 EYPHMCGKCGYRAAYKSNLSIHMRTHTGEKPYKCDQCDYSAARKSHLDKHL 397
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y + H H G+K +KC C Y A +K L H+ TK
Sbjct: 546 YMCGECGYRAARKSTLSEHMRTHTGEKPYKCDQCDYSAGRKSSLNKHMTKHTGTK 600
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 68 MEHSE-NCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQ 126
+EH E N P + P ++C C + T ++ H H DK +KC C Y A
Sbjct: 194 LEHGESNMPELNTEKP----YMCGECGFRTKQKSDLSIHKRTHTSDKPYKCDQCDYSAAG 249
Query: 127 KEKLQFHVKNKHS 139
K L +H+ +KH+
Sbjct: 250 KSALDYHL-SKHT 261
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 15/106 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLME---HSENCPCMVRPDPVKYKFICVACDYFTI 97
+M+ + P C C T+ NL + H+ + P + C CDY
Sbjct: 102 HMTKHSGEKPYMCGECGYRTARKFNLSLHMRIHTGDKP-----------YKCDQCDYSAA 150
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+ +H H G+K + C C Y +K L H+K HS K++
Sbjct: 151 QKSTLVSHQANHTGEKPYMCGECGYRTARKGGLSRHMKT-HSAKLE 195
>gi|410905025|ref|XP_003965992.1| PREDICTED: zinc finger protein 407-like [Takifugu rubripes]
Length = 1276
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 53 CKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
CK+C K SS+ + H +R F+C C++ T + RNH HLG
Sbjct: 718 CKYCGKVCKSSNSMAFLAH-------IRTHTGSKPFMCKICNFATAQLGDARNHVKRHLG 770
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+++KC +C + K+ L H+ KH
Sbjct: 771 MREYKCDICGWAFVMKKHLSTHLLGKH 797
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL-- 107
P CK C NF S+ + L H R + + C CDY + ++N+R H L
Sbjct: 892 PFKCKFC-NFASTTQSHLSRHK-------RVHTGEKPYRCPWCDYRSNCAENIRKHILHT 943
Query: 108 -IHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G K + C C++G + + H+K H+
Sbjct: 944 GKHEGVKMYNCPKCTFGTNSPMEFRNHLKENHA 976
>gi|402908749|ref|XP_003917098.1| PREDICTED: transcriptional repressor CTCF-like, partial [Papio
anubis]
Length = 452
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|443706730|gb|ELU02644.1| hypothetical protein CAPTEDRAFT_114378, partial [Capitella teleta]
Length = 126
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C CDY T+ ++R H H G+K +KC C Y Q L+ H++ H
Sbjct: 62 YKCDKCDYATVERSHLRVHMRTHTGEKPYKCEYCDYATAQNSTLKIHLRRHH 113
>gi|45384498|ref|NP_990663.1| transcriptional repressor CTCF [Gallus gallus]
gi|1706178|sp|Q08705.1|CTCF_CHICK RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc
finger protein; AltName: Full=CCCTC-binding factor;
AltName: Full=CTCFL paralog
gi|396094|emb|CAA80319.1| CTCF protein [Gallus gallus]
Length = 728
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|449268819|gb|EMC79656.1| Transcriptional repressor CTCF [Columba livia]
Length = 725
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 347 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 401
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 346 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 397
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 398 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 430
>gi|260832594|ref|XP_002611242.1| hypothetical protein BRAFLDRAFT_71201 [Branchiostoma floridae]
gi|229296613|gb|EEN67252.1| hypothetical protein BRAFLDRAFT_71201 [Branchiostoma floridae]
Length = 1259
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 85 YKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++F C C Y T HT H G+K FKC C Y A +K ++H+
Sbjct: 803 HRFECTECSYTTTKKDKFVRHTRTHTGEKPFKCDRCDYSAAEKSTFKYHM 852
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y + + H +H G+K +KC C Y A Q+ L++H+
Sbjct: 427 FMCGECGYRSADRSVLTKHMRMHTGEKPYKCDQCDYSAAQRSHLKYHM 474
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 22/102 (21%)
Query: 55 HCKNFTSSDVNLLMEHSEN----CPCMVRPD------------------PVKYKFICVAC 92
H + TSS L ME +N PC R V+ +F C C
Sbjct: 260 HPGDETSSSEKLDMERQQNKEGDIPCEERGGVESDHPPAQGGTEQTDRHAVEKRFACTDC 319
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
Y T +++H H G+K +KC C Y A K+ L H+
Sbjct: 320 GYRTDRKYLLKSHMRKHTGEKPYKCDRCDYSAAWKDNLDLHM 361
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+IC C + T+ S ++ H H G+K +KC C + + +K L H++
Sbjct: 595 YICGECGFMTVASSSLTTHMRTHTGEKPYKCDRCDHSSAKKCNLDVHIR 643
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
+ S+D ++L +H +R + + C CDY +++ H H G+K FKC
Sbjct: 433 GYRSADRSVLTKH-------MRMHTGEKPYKCDQCDYSAAQRSHLKYHMAQHTGEKPFKC 485
Query: 118 CLCSYGAYQKEKLQFHVKN 136
C Y K L H++
Sbjct: 486 GECEYRTAMKSHLSEHMRR 504
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C C+Y T + ++ H H G+K +KC C Y K L H+
Sbjct: 483 FKCGECEYRTAMKSHLSEHMRRHKGEKPYKCDQCDYSGASKSNLDQHM 530
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C+Y T + ++ H H G+K +KC C Y K L H+
Sbjct: 861 YKCGECEYRTAMKSHLSEHMRRHTGEKPYKCDQCDYSGASKSNLDQHM 908
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C+Y T + ++ H H G+K +KC C Y K L H+
Sbjct: 1139 YKCGECEYRTAMKSHLSEHMRRHTGEKPYKCDQCDYSGASKSNLDQHM 1186
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H IH DK++ C C + K L+ H+K
Sbjct: 511 YKCDQCDYSGASKSNLDQHMAIHAEDKRYVCGECGFRTAAKSSLKVHMK 559
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C + N+ H H G+K +KC C Y A QK KL H + KH+
Sbjct: 72 FARTECGHRAASESNLIKHKRKHTGEKPYKCDQCDYSAAQKGKLDRH-RAKHT 123
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGD---KQFKCCLCSYGAYQKEKLQFHV 134
+++C C Y T ++ H H GD K++KC C Y A K +L H+
Sbjct: 369 RYMCGECGYRTADRSHLSRHMRRHTGDKPYKKYKCDQCDYSAASKGELDRHM 420
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CD+ T HT H +K +KC C Y A +K ++H+
Sbjct: 1083 FECTECDFTTTKKDTFVIHTRRHTVEKPYKCDRCDYSAAEKSTFKYHM 1130
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY T N+ H + H G+K + C C Y + L H++
Sbjct: 945 YRCDQCDYSTAWKGNLDGHVVQHTGEKPYVCGECGYRTAVRSHLTVHMR 993
>gi|170671926|ref|NP_001116268.1| CCCTC-binding factor (zinc finger protein) [Xenopus (Silurana)
tropicalis]
gi|170284950|gb|AAI61099.1| ctcf protein [Xenopus (Silurana) tropicalis]
Length = 734
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 349 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 403
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 348 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 399
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 400 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 432
>gi|431912370|gb|ELK14504.1| Transcriptional repressor CTCF [Pteropus alecto]
Length = 727
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|31044459|ref|NP_851839.1| transcriptional repressor CTCF [Mus musculus]
gi|30172804|sp|Q61164.2|CTCF_MOUSE RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc
finger protein; AltName: Full=CCCTC-binding factor;
AltName: Full=CTCFL paralog
gi|28204911|gb|AAH46398.1| CCCTC-binding factor [Mus musculus]
gi|29165754|gb|AAH49131.1| CCCTC-binding factor [Mus musculus]
gi|34849682|gb|AAH58240.1| CCCTC-binding factor [Mus musculus]
gi|148679345|gb|EDL11292.1| CCCTC-binding factor, isoform CRA_a [Mus musculus]
gi|148679346|gb|EDL11293.1| CCCTC-binding factor, isoform CRA_a [Mus musculus]
gi|148679350|gb|EDL11297.1| CCCTC-binding factor, isoform CRA_a [Mus musculus]
Length = 736
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|417404195|gb|JAA48867.1| Putative transcriptional repressor ctcf [Desmodus rotundus]
Length = 725
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|354492938|ref|XP_003508601.1| PREDICTED: transcriptional repressor CTCF [Cricetulus griseus]
gi|344240945|gb|EGV97048.1| Transcriptional repressor CTCF [Cricetulus griseus]
Length = 734
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|260814472|ref|XP_002601939.1| hypothetical protein BRAFLDRAFT_86423 [Branchiostoma floridae]
gi|229287242|gb|EEN57951.1| hypothetical protein BRAFLDRAFT_86423 [Branchiostoma floridae]
Length = 491
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C C+Y T S ++ NH +H G++ +KC C Y +KE L+ HV
Sbjct: 151 FACSLCEYRTHNSNHLSNHMAVHTGERPYKCDKCDYSTSRKEHLKRHV 198
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T S N+ H IH G+K + C LC Y A++K L H+
Sbjct: 441 YLCGECGFRTTKS-NLSRHMKIHTGNKPYNCELCHYRAFRKGNLARHM 487
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C CDY T+ + + H H G+K + C C Y QK+ L H+ +KH+ +
Sbjct: 237 YKCDQCDYSTVWKECLTGHMARHTGEKPYMCGECGYRTAQKQCLNIHM-SKHTGE 290
>gi|149699225|ref|XP_001497859.1| PREDICTED: transcriptional repressor CTCF isoform 1 [Equus
caballus]
Length = 727
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|390360870|ref|XP_003729790.1| PREDICTED: zinc finger protein 91-like [Strongylocentrotus
purpuratus]
Length = 833
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 13/124 (10%)
Query: 25 VPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPC-------- 76
V ++I +G +CP +F+ S +S + +++T+ E C
Sbjct: 545 VNTNIRKNMGEKTSCPTQTFVCSDCGKSFEKRRSYTAHRRTHRSERPHKCEFCGMGFKQA 604
Query: 77 -----MVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQ 131
VR + FIC C+ I S +RNH LIH G K +KC C Q+
Sbjct: 605 LTLTHHVRKHTGEKPFICEVCNKSFIRSDGLRNHMLIHTGSKPYKCMFCEEWFDQRSSRA 664
Query: 132 FHVK 135
H K
Sbjct: 665 VHEK 668
>gi|354476730|ref|XP_003500576.1| PREDICTED: zinc finger protein 335-like isoform 1 [Cricetulus
griseus]
Length = 1339
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK F+C C Y ++++ L HV KH+
Sbjct: 622 RFKCEFCEFVCDDKKALLNHQLSHVSDKPFRCSFCPYRTFREDFLLSHVAVKHT 675
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C C + + +++R H L H +K F C LC + L+FH++ HS+
Sbjct: 1078 CNQCSFASKNKKDLRRHMLTHTNEKPFSCHLCGQRFNRNGHLKFHIQRLHSS 1129
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI-HLG 111
C+ C+ F D L+ H + V P F C C Y T + +H + H G
Sbjct: 625 CEFCE-FVCDDKKALLNHQLS---HVSDKP----FRCSFCPYRTFREDFLLSHVAVKHTG 676
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
K F C C + K+ L+ HV+ +H+ ++
Sbjct: 677 AKPFACEYCHFSTRHKKNLRLHVRCRHANSFEE 709
>gi|351714107|gb|EHB17026.1| Transcriptional repressor CTCF [Heterocephalus glaber]
Length = 728
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|301766124|ref|XP_002918465.1| PREDICTED: transcriptional repressor CTCF-like [Ailuropoda
melanoleuca]
Length = 727
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|171474905|gb|ACB47393.1| CCCTC-binding factor [Pogona vitticeps]
Length = 727
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|119603550|gb|EAW83144.1| CCCTC-binding factor (zinc finger protein), isoform CRA_c [Homo
sapiens]
Length = 736
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 360 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 414
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 359 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 410
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 411 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 443
>gi|49227649|ref|NP_001001844.1| transcriptional repressor CTCF [Danio rerio]
gi|47132309|gb|AAT11782.1| CCCTC-binding factor [Danio rerio]
gi|190337802|gb|AAI63935.1| CCCTC-binding factor (zinc finger protein) [Danio rerio]
gi|190338626|gb|AAI63931.1| CCCTC-binding factor (zinc finger protein) [Danio rerio]
Length = 798
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 391 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 445
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 390 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 441
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 442 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 474
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+F C CDY ++M H H G+K + C C QK+ L H + H
Sbjct: 534 RFKCDQCDYACRQERHMVMHKRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYH 586
>gi|327281289|ref|XP_003225381.1| PREDICTED: transcriptional repressor CTCF-like [Anolis
carolinensis]
Length = 731
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|291390326|ref|XP_002711662.1| PREDICTED: CCCTC-binding factor [Oryctolagus cuniculus]
Length = 728
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|281340291|gb|EFB15875.1| hypothetical protein PANDA_006942 [Ailuropoda melanoleuca]
Length = 728
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|73957275|ref|XP_864432.1| PREDICTED: transcriptional repressor CTCF isoform 2 [Canis lupus
familiaris]
Length = 727
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|403290501|ref|XP_003936352.1| PREDICTED: transcriptional repressor CTCF [Saimiri boliviensis
boliviensis]
Length = 727
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|355710297|gb|EHH31761.1| CCCTC-binding factor [Macaca mulatta]
gi|355763891|gb|EHH62222.1| CCCTC-binding factor [Macaca fascicularis]
gi|380808904|gb|AFE76327.1| transcriptional repressor CTCF isoform 1 [Macaca mulatta]
gi|383415263|gb|AFH30845.1| transcriptional repressor CTCF isoform 1 [Macaca mulatta]
gi|384944858|gb|AFI36034.1| transcriptional repressor CTCF isoform 1 [Macaca mulatta]
Length = 727
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|148679347|gb|EDL11294.1| CCCTC-binding factor, isoform CRA_b [Mus musculus]
Length = 733
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|417412333|gb|JAA52556.1| Putative transcriptional repressor ctcf, partial [Desmodus
rotundus]
Length = 694
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 371 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 425
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 370 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 421
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 422 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 454
>gi|344290683|ref|XP_003417067.1| PREDICTED: transcriptional repressor CTCF-like [Loxodonta africana]
Length = 726
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|260813382|ref|XP_002601397.1| hypothetical protein BRAFLDRAFT_243962 [Branchiostoma floridae]
gi|229286692|gb|EEN57409.1| hypothetical protein BRAFLDRAFT_243962 [Branchiostoma floridae]
Length = 410
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T N+ HT H G+K +KC C Y A +K L H++
Sbjct: 327 YMCGECGYRTTKKSNLSRHTRTHTGEKPYKCDQCDYSAARKSTLSRHMR 375
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 14/102 (13%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C+ + NL L +H+ P ++C C + T
Sbjct: 120 HMKTHTGEKPYKCDQCEYAAAHKSNLDKHLRKHTGEKP-----------YMCGECGFRTT 168
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+++ H H G+K +KC C Y A +K L H KHS
Sbjct: 169 HKESLSRHMRTHTGEKPYKCDQCDYSAARKSTLDNHTVAKHS 210
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L H+ +P ++C C Y +
Sbjct: 176 HMRTHTGEKPYKCDQC-DYSAARKSTLDNHTVAKHSGEKP------YMCGECGYRAVHKS 228
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H H G+K +KC C Y A QK L H++
Sbjct: 229 DLSKHMRTHTGEKPYKCDQCDYSAAQKSTLDQHLRK 264
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C T+ NL R + + C CDY + H IH
Sbjct: 326 PYMCGECGYRTTKKSNLSRH--------TRTHTGEKPYKCDQCDYSAARKSTLSRHMRIH 377
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K +KC C Y A +K L H++
Sbjct: 378 TGEKPYKCDQCDYSATEKSTLVKHIRK 404
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y TI + H H G+K +KC C Y +K KL H + KH+
Sbjct: 4 YMCEECGYRTIRKYTLSLHMKTHTGEKPYKCDQCDYSFAEKSKLGRH-RRKHT 55
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI-HLGDKQF 115
K + + H E+ +R + + C CDY + NHT+ H G+K +
Sbjct: 156 KPYMCGECGFRTTHKESLSRHMRTHTGEKPYKCDQCDYSAARKSTLDNHTVAKHSGEKPY 215
Query: 116 KCCLCSYGAYQKEKLQFHVKN 136
C C Y A K L H++
Sbjct: 216 MCGECGYRAVHKSDLSKHMRT 236
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 8/98 (8%)
Query: 39 CPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTII 98
C + P C C +++++ + L H +R + ++C C Y T
Sbjct: 62 CGDCGTHTGEKPYKCDQC-DYSAAHKSHLTRH-------LRKHTGEKPYMCGECGYRTAQ 113
Query: 99 SQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ H H G+K +KC C Y A K L H++
Sbjct: 114 RCTLSLHMKTHTGEKPYKCDQCEYAAAHKSNLDKHLRK 151
>gi|426382551|ref|XP_004057868.1| PREDICTED: transcriptional repressor CTCF isoform 2 [Gorilla
gorilla gorilla]
Length = 728
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|354476732|ref|XP_003500577.1| PREDICTED: zinc finger protein 335-like isoform 2 [Cricetulus
griseus]
Length = 1345
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK F+C C Y ++++ L HV KH+
Sbjct: 628 RFKCEFCEFVCDDKKALLNHQLSHVSDKPFRCSFCPYRTFREDFLLSHVAVKHT 681
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C C + + +++R H L H +K F C LC + L+FH++ HS+
Sbjct: 1084 CNQCSFASKNKKDLRRHMLTHTNEKPFSCHLCGQRFNRNGHLKFHIQRLHSS 1135
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI-HLG 111
C+ C+ F D L+ H + V P F C C Y T + +H + H G
Sbjct: 631 CEFCE-FVCDDKKALLNHQLS---HVSDKP----FRCSFCPYRTFREDFLLSHVAVKHTG 682
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
K F C C + K+ L+ HV+ +H+ ++
Sbjct: 683 AKPFACEYCHFSTRHKKNLRLHVRCRHANSFEE 715
>gi|350597085|ref|XP_003484355.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional repressor CTCF [Sus
scrofa]
Length = 730
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|347582670|ref|NP_001231589.1| CCCTC-binding factor (zinc finger protein) [Sus scrofa]
Length = 727
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|332227530|ref|XP_003262944.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional repressor CTCF
[Nomascus leucogenys]
Length = 727
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|395853899|ref|XP_003799436.1| PREDICTED: transcriptional repressor CTCF [Otolemur garnettii]
Length = 727
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|5729790|ref|NP_006556.1| transcriptional repressor CTCF isoform 1 [Homo sapiens]
gi|114663147|ref|XP_511035.2| PREDICTED: transcriptional repressor CTCF isoform 2 [Pan
troglodytes]
gi|395747987|ref|XP_002826593.2| PREDICTED: transcriptional repressor CTCF [Pongo abelii]
gi|397482030|ref|XP_003812238.1| PREDICTED: transcriptional repressor CTCF [Pan paniscus]
gi|426382549|ref|XP_004057867.1| PREDICTED: transcriptional repressor CTCF isoform 1 [Gorilla
gorilla gorilla]
gi|1706179|sp|P49711.1|CTCF_HUMAN RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc
finger protein; AltName: Full=CCCTC-binding factor;
AltName: Full=CTCFL paralog
gi|924760|gb|AAB07788.1| CTCF [Homo sapiens]
gi|6910966|gb|AAF31318.1| transcriptional repressor CTCF [Homo sapiens]
gi|15679930|gb|AAH14267.1| CCCTC-binding factor (zinc finger protein) [Homo sapiens]
gi|32880173|gb|AAP88917.1| CCCTC-binding factor (zinc finger protein) [Homo sapiens]
gi|61362955|gb|AAX42307.1| CCCTC-binding factor [synthetic construct]
gi|119603548|gb|EAW83142.1| CCCTC-binding factor (zinc finger protein), isoform CRA_a [Homo
sapiens]
gi|123998317|gb|ABM86760.1| CCCTC-binding factor (zinc finger protein) [synthetic construct]
gi|157929070|gb|ABW03820.1| CCCTC-binding factor (zinc finger protein) [synthetic construct]
gi|168279043|dbj|BAG11401.1| transcriptional repressor CTCF [synthetic construct]
gi|410208648|gb|JAA01543.1| CCCTC-binding factor (zinc finger protein) [Pan troglodytes]
gi|410254266|gb|JAA15100.1| CCCTC-binding factor (zinc finger protein) [Pan troglodytes]
gi|410292426|gb|JAA24813.1| CCCTC-binding factor (zinc finger protein) [Pan troglodytes]
gi|410355099|gb|JAA44153.1| CCCTC-binding factor (zinc finger protein) [Pan troglodytes]
Length = 727
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|341885165|gb|EGT41100.1| hypothetical protein CAEBREN_10213 [Caenorhabditis brenneri]
Length = 382
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F C C F S ++R H H +K + CC+C+Y A +++ L H+ +H T+
Sbjct: 271 FKCEDCGRFFSRSDHLRTHRRTHTDEKPYHCCVCNYSARRRDVLTRHMSTRHQTQA 326
>gi|341876826|gb|EGT32761.1| hypothetical protein CAEBREN_19187 [Caenorhabditis brenneri]
Length = 382
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F C C F S ++R H H +K + CC+C+Y A +++ L H+ +H T+
Sbjct: 271 FKCEDCGRFFSRSDHLRTHRRTHTDEKPYHCCVCNYSARRRDVLTRHMSTRHQTQA 326
>gi|260804289|ref|XP_002597021.1| hypothetical protein BRAFLDRAFT_58407 [Branchiostoma floridae]
gi|229282282|gb|EEN53033.1| hypothetical protein BRAFLDRAFT_58407 [Branchiostoma floridae]
Length = 595
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T +++ H L+H G+K +KC C Y A +K L H+
Sbjct: 149 FMCGECGYRTAYRRHLSRHMLVHTGEKPYKCDQCDYSAARKSSLDSHL 196
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H G+K +KC C Y A +K L H+
Sbjct: 205 YMCGECGYRTAVKSHLSRHMRTHTGEKPYKCDQCDYSAARKSSLDSHL 252
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 16/97 (16%)
Query: 42 MSFLNSVIPQSCKHC----KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
M P C C +N + D N L +H+ + P ++C AC Y +
Sbjct: 1 MRIHTGEKPYKCDQCDYSARNRSGLD-NHLAKHTGDKP-----------YMCGACGYRAL 48
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ + H H G+K +KC C Y A K L +H+
Sbjct: 49 LHSTLSQHMRTHTGEKPYKCDQCDYSARNKCNLDYHL 85
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + + H + H G+K +KC C Y A QK L H + KH+
Sbjct: 384 YMCGECGYRALFHSTLSKHMMTHTGEKPYKCDQCDYSAAQKYHLDNH-RAKHT 435
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY +++H L H GDK + C C + Q+ L H+K
Sbjct: 289 YKCDQCDYSAAQKSTLKSHLLKHAGDKPYMCGECGFRTTQRSHLSRHMK 337
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 92 CDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
CDY N+ NH L H G+K + C C Y +K L H++
Sbjct: 515 CDYSAAHKSNLDNHLLKHTGEKPYMCGECGYSTTRKSHLSLHMRR 559
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC ++++S+ L H V F+C C Y T + + H H
Sbjct: 453 PYKCDHC-DYSASEKATLNSH-------VAKHTGDEPFMCGECGYRTAVKSRLSMHMRTH 504
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G++ +K C Y A K L H+
Sbjct: 505 TGERPYKRDQCDYSAAHKSNLDNHL 529
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 36 CQTCPNMSFLNSVI-----------PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPD 81
C C + L+S + P C C + NL L +H+ N P
Sbjct: 40 CGACGYRALLHSTLSQHMRTHTGEKPYKCDQCDYSARNKCNLDYHLAKHTGNKP------ 93
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T ++ H IH G++ +KC C Y A QK L H + KH+
Sbjct: 94 -----YMCGECGYRTTKKCHLSKHIRIHTGER-YKCDQCDYSAAQKSTLDGH-RAKHT 144
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Query: 87 FICVACDYFTI----ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y +SQ+MR HT G+K +KC C Y A QK L+ H+
Sbjct: 261 YMCGECGYRATRRFYLSQHMRRHT----GEKPYKCDQCDYSAAQKSTLKSHL 308
>gi|149038028|gb|EDL92388.1| CCCTC-binding factor, isoform CRA_a [Rattus norvegicus]
gi|149038029|gb|EDL92389.1| CCCTC-binding factor, isoform CRA_a [Rattus norvegicus]
Length = 738
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|25742638|ref|NP_114012.1| transcriptional repressor CTCF [Rattus norvegicus]
gi|30172732|sp|Q9R1D1.1|CTCF_RAT RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc
finger protein; AltName: Full=CCCTC-binding factor;
AltName: Full=CTCFL paralog
gi|5670340|gb|AAD27869.2|AF133731_1 11-zinc finger protein [Rattus norvegicus]
Length = 737
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|260832562|ref|XP_002611226.1| hypothetical protein BRAFLDRAFT_138781 [Branchiostoma floridae]
gi|229296597|gb|EEN67236.1| hypothetical protein BRAFLDRAFT_138781 [Branchiostoma floridae]
Length = 314
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%)
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ V ++ CV CDY T + HT H G+K +KC C Y A QK L H+
Sbjct: 1 NTVDKQYACVECDYRTASKTKLSTHTRKHTGEKPYKCNQCKYSAAQKCTLDRHM 54
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y T N+ H H G+K +KC C Y A +K L HV +KH+
Sbjct: 63 FMCDECGYRTTNRFNLSMHVRKHTGEKPYKCDQCDYSAARKVHLDGHVTSKHT 115
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 15/107 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M V P C C+ T NL + H P F+C C Y T
Sbjct: 138 HMRTHTGVKPYKCDQCEYSTGRKSNLNRHMANHKGEKP-----------FMCGECGYRTA 186
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
++ H H G+K +KC C Y A K L H+ KH+ ++ D
Sbjct: 187 NRYDLSRHMRTHTGEKPYKCDQCEYSAAHKVSLDHHI-TKHTGEMCD 232
>gi|260819953|ref|XP_002605300.1| hypothetical protein BRAFLDRAFT_59963 [Branchiostoma floridae]
gi|229290632|gb|EEN61310.1| hypothetical protein BRAFLDRAFT_59963 [Branchiostoma floridae]
Length = 507
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
K + C C Y T N++ H H G+K +KC +C YG L+ HV KHS
Sbjct: 153 KRPYNCDICGYRTAQMSNLKRHMAKHTGEKPYKCDICGYGTADMSNLKRHVMGKHS 208
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C Y T + N+++H H G+K +KC C YG L+ H+ KH+ K
Sbjct: 100 YKCDFCGYSTTLMPNLKHHMAKHTGEKPYKCDTCGYGTALMSNLKRHM-AKHTGK 153
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C C Y T +++ H +IH +K +KC +C Y L+ H+ +H
Sbjct: 353 YKCEVCGYATSRISDLKKHIVIHTDEKPYKCDICGYNTAHVSSLKRHIMGQH 404
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ P C C + ++D++ L H D YK C C Y T
Sbjct: 174 HMAKHTGEKPYKCDIC-GYGTADMSNLKRHVMG----KHSDEKSYK--CGFCGYVTSRLF 226
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+++ HT H G+K + C LC YG + L+ H+
Sbjct: 227 DLKKHTAKHTGEKPYNCELCGYGTVRMSYLKRHM 260
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T + N++ H H G + + C +C Y Q L+ H+
Sbjct: 128 YKCDTCGYGTALMSNLKRHMAKHTGKRPYNCDICGYRTAQMSNLKRHM 175
>gi|410953480|ref|XP_003983398.1| PREDICTED: transcriptional repressor CTCFL [Felis catus]
Length = 645
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ HT H G++ F+C LCSY + KL+ H++ K
Sbjct: 340 FKCSICKYASVEASKLKRHTRSHTGERPFQCSLCSYASKDTYKLKRHMRTHSGEK 394
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H+ R + F C C Y + + ++ H H
Sbjct: 339 PFKCSICK-YASVEASKLKRHT-------RSHTGERPFQCSLCSYASKDTYKLKRHMRTH 390
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ HV KHS V
Sbjct: 391 SGEKPYECHVCHTRFTQSGTMKIHVLQKHSKNV 423
>gi|410983713|ref|XP_003998182.1| PREDICTED: transcriptional repressor CTCF [Felis catus]
Length = 727
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|391329353|ref|XP_003739139.1| PREDICTED: zinc finger protein 568-like [Metaseiulus occidentalis]
Length = 170
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRP------DPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
N + + N + NC + +P DP K F C C+Y + N H IH G
Sbjct: 62 NVATQETNNNFTNDGNCGRIGKPGRKAVRDPNK-PFQCNVCEYSSKSKSNFTIHMRIHTG 120
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+K F C C Y QK L+ H + +H
Sbjct: 121 EKPFACSECDYRTSQKGNLRIHKERRHG 148
>gi|296231345|ref|XP_002807797.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional repressor CTCF
[Callithrix jacchus]
Length = 726
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|443697400|gb|ELT97898.1| hypothetical protein CAPTEDRAFT_71961, partial [Capitella teleta]
Length = 262
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+ C NF + ++ +H + + D + KF C C + T H L+H G+
Sbjct: 60 CEEC-NFGPASKKVISQHMK-----LHRDGTEMKFFCEQCSFITHNKSRFERHLLVHSGE 113
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
K F C C Y + QK + H+ +KH V
Sbjct: 114 KPFACDQCDYQSAQKAHVLRHMSSKHRVVV 143
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
FIC C+Y S N+R H L H K FKC C+ QK L H+++ H+T +
Sbjct: 1 FICDECNYKCSSSSNLRRHKLTHSSVKMFKCSQCAKSFRQKAHLDRHIRSLHATGAQ 57
>gi|30584039|gb|AAP36268.1| Homo sapiens CCCTC-binding factor (zinc finger protein) [synthetic
construct]
gi|60654115|gb|AAX29750.1| CCCTC-binding factor [synthetic construct]
Length = 728
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|413914787|gb|AFW21372.1| CCCTC-binding factor [Bubalus bubalis]
Length = 727
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|326927215|ref|XP_003209788.1| PREDICTED: transcriptional repressor CTCF-like [Meleagris
gallopavo]
Length = 728
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|1256410|gb|AAC52928.1| 11-zinc-finger transcription factor [Mus musculus]
Length = 736
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|348572570|ref|XP_003472065.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional repressor CTCF-like
[Cavia porcellus]
Length = 728
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|148679348|gb|EDL11295.1| CCCTC-binding factor, isoform CRA_c [Mus musculus]
Length = 683
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|432093622|gb|ELK25604.1| Transcriptional repressor CTCF [Myotis davidii]
Length = 728
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|73624754|gb|AAZ79234.1| BORIS [Mus musculus]
Length = 636
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + M+ H H G++ F+CC C+Y + KL+ H++ K
Sbjct: 342 FKCSLCKYASVEASKMKRHIRSHTGERPFQCCQCAYASRDSYKLKRHMRTHSGEK 396
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
KF C CDY + ++ H +H G+K F C C+ QK+ L H++ H
Sbjct: 485 KFKCKQCDYACKQERCLKAHMRMHTGEKPFSCLACNKHFRQKQLLTVHLRKYH 537
>gi|74140944|dbj|BAE22063.1| unnamed protein product [Mus musculus]
gi|74208933|dbj|BAE21212.1| unnamed protein product [Mus musculus]
Length = 598
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 214 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 268
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 213 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 264
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 265 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 297
>gi|440905441|gb|ELR55818.1| Transcriptional repressor CTCF [Bos grunniens mutus]
Length = 728
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|223462331|gb|AAI51027.1| Ctcfl protein [Mus musculus]
Length = 646
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + M+ H H G++ F+CC C+Y + KL+ H++ K
Sbjct: 342 FKCSLCKYASVEASKMKRHIRSHTGERPFQCCQCAYASRDSYKLKRHMRTHSGEK 396
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
KF C CDY + ++ H +H G+K F C C+ QK+ L H++ H
Sbjct: 485 KFKCKQCDYACKQERCLKAHMRMHTGEKPFSCLACNKHFRQKQLLTVHLRKYH 537
>gi|115496123|ref|NP_001069216.1| transcriptional repressor CTCF [Bos taurus]
gi|426242519|ref|XP_004015120.1| PREDICTED: transcriptional repressor CTCF isoform 1 [Ovis aries]
gi|426242521|ref|XP_004015121.1| PREDICTED: transcriptional repressor CTCF isoform 2 [Ovis aries]
gi|115305202|gb|AAI23742.1| CCCTC-binding factor (zinc finger protein) [Bos taurus]
gi|296477963|tpg|DAA20078.1| TPA: CCCTC-binding factor [Bos taurus]
Length = 727
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|432852780|ref|XP_004067381.1| PREDICTED: transcriptional repressor CTCF-like [Oryzias latipes]
Length = 753
Score = 43.5 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 349 FKCSMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 403
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 348 PFKCSMC-DYSSVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 399
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 400 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 432
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+F C CDY ++M H H G+K F C C QK+ L H K H
Sbjct: 492 RFKCDQCDYCCRQERHMIMHKRTHTGEKPFACEQCEKTFRQKQLLDMHFKRYH 544
>gi|124487069|ref|NP_001074856.1| transcriptional repressor CTCFL [Mus musculus]
gi|229553919|sp|A2APF3.1|CTCFL_MOUSE RecName: Full=Transcriptional repressor CTCFL; AltName:
Full=Brother of the regulator of imprinted sites;
AltName: Full=CCCTC-binding factor; AltName: Full=CTCF
paralog; AltName: Full=CTCF-like protein
gi|157170432|gb|AAI52846.1| CCCTC-binding factor (zinc finger protein)-like [synthetic
construct]
Length = 636
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + M+ H H G++ F+CC C+Y + KL+ H++ K
Sbjct: 342 FKCSLCKYASVEASKMKRHIRSHTGERPFQCCQCAYASRDSYKLKRHMRTHSGEK 396
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
KF C CDY + ++ H +H G+K F C C+ QK+ L H++ H
Sbjct: 485 KFKCKQCDYACKQERCLKAHMRMHTGEKPFSCLACNKHFRQKQLLTVHLRKYH 537
>gi|348509710|ref|XP_003442390.1| PREDICTED: transcriptional repressor CTCF-like [Oreochromis
niloticus]
Length = 773
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 401 FKCSMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 455
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 400 PFKCSMC-DYSSVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 451
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 452 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 484
>gi|260823112|ref|XP_002604027.1| hypothetical protein BRAFLDRAFT_57764 [Branchiostoma floridae]
gi|229289352|gb|EEN60038.1| hypothetical protein BRAFLDRAFT_57764 [Branchiostoma floridae]
Length = 481
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++++ + L++H +R +IC C + T
Sbjct: 18 HMRIHTGEKPYKCDQC-DYSATEKSTLVKH-------IRKHTGDKPYICGECGHKTAKKS 69
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H IH G+K +KC C Y A K L+ HV KHS
Sbjct: 70 HLSRHMRIHTGEKPYKCDQCDYSAAHKWNLEQHV-AKHS 107
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
C +M P C C +++++ LL +H M D K ++C C +
Sbjct: 125 CNLSKHMRKHTGEKPYKCDQC-DYSAAQKGLLDQH-----LMKHTD--KRPYMCGECGHR 176
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H IH G+K +KC C Y A QK +Q HV KHST+
Sbjct: 177 ATQKSDLFKHMRIHTGEKPYKCDQCDYSAAQKSHMQQHVL-KHSTE 221
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+C C Y T+ + H IH G+K +KC C Y A +K L H++
Sbjct: 1 MCGECGYRTVERSTLSRHMRIHTGEKPYKCDQCDYSATEKSTLVKHIR 48
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 16/122 (13%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
C C D+F +M P C C +++++ + + +H
Sbjct: 170 CGECGHRATQKSDLF-------KHMRIHTGEKPYKCDQC-DYSAAQKSHMQQH------- 214
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
V + +IC C Y + + H H G+K +KC LC+Y A +K L H+ K
Sbjct: 215 VLKHSTEKPYICEKCGYRSARKSCLSQHMKTHTGEKPYKCDLCNYSATRKSNLDQHL-AK 273
Query: 138 HS 139
HS
Sbjct: 274 HS 275
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C + T++ ++ H H G+K ++C C Y A QK L H++
Sbjct: 280 YMCDKCGFRTVLKCSLSRHMRTHTGEKPYRCDQCDYSAAQKSDLSTHMR 328
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H G+K +KC C Y A QK L H+
Sbjct: 112 YMCGECGYRTAQKCNLSKHMRKHTGEKPYKCDQCDYSAAQKGLLDQHL 159
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 8/107 (7%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
C +M P C C +++++D L H R + ++C C +
Sbjct: 377 CNLSRHMRTHTGEKPYKCDQC-DYSAADRTTLANHQ-------RKHTGEKPYMCGECGFR 428
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
T M H H G+K + C C Y + L H+++ K+
Sbjct: 429 TTRKSIMSEHMRTHTGEKPYICGECGYRTADRSTLSRHMRSHTGQKL 475
>gi|260835928|ref|XP_002612959.1| hypothetical protein BRAFLDRAFT_213194 [Branchiostoma floridae]
gi|229298341|gb|EEN68968.1| hypothetical protein BRAFLDRAFT_213194 [Branchiostoma floridae]
Length = 391
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+IC C Y TI N+ H H G+K C C+Y K L+ H+ KH+ K
Sbjct: 325 YICRECGYRTITKTNLLRHMRKHTGEKPHACDFCNYSTADKGTLERHITAKHADK 379
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+IC C Y TI N+ H H G+K C C+Y K L+ H+ KH+ K
Sbjct: 128 YICRECGYRTITKTNLVRHMRKHTGEKPHACDHCNYSTADKGNLERHITAKHADK 182
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T ++ NH H G+K +KC C Y A Q+ L H+K
Sbjct: 72 YMCGECGYRTDYHSHLSNHMRTHTGEKPYKCHQCDYSARQQSALDNHLK 120
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T ++ NH H G+K +KC C Y A Q+ L H+K
Sbjct: 269 YMCGECGYRTDYHSHLSNHMRTHTGEKPYKCHQCDYSARQQSALDNHLK 317
>gi|360044188|emb|CCD81735.1| putative zinc finger protein [Schistosoma mansoni]
Length = 335
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 53 CKHCKNFTSSDVNL----LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
C++CK S V+L + H++N P F C C Y T+ +++ H
Sbjct: 228 CEYCKREFSQKVHLQKHIMSTHTKNKP-----------FKCSICSYQTVEKSHLKTHFRK 276
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
H G+K F C LC+Y A Q L+ H KH
Sbjct: 277 HTGEKPFSCTLCTYRAAQHSTLKQHCIKKH 306
>gi|340436|gb|AAA61310.1| zinc finger protein [Homo sapiens]
Length = 801
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C +R H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRYPSELRKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 599
>gi|355681360|gb|AER96783.1| CCCTC-binding factor [Mustela putorius furo]
Length = 615
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 354 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 408
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 353 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 404
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 405 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 437
>gi|260804257|ref|XP_002597005.1| hypothetical protein BRAFLDRAFT_58405 [Branchiostoma floridae]
gi|229282266|gb|EEN53017.1| hypothetical protein BRAFLDRAFT_58405 [Branchiostoma floridae]
Length = 422
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H GDK +KC C Y A QK L HV
Sbjct: 332 YMCGKCGYMTDRNSDLSRHMRTHTGDKPYKCDQCDYSAAQKSSLNQHV 379
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L +H+ + P ++C C Y T
Sbjct: 18 HMRTHTGEKPYKCDQCDYSAAQKNNLDQHLAKHAGDKP-----------YMCGECGYRTT 66
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H GDK +KC C Y A QK L H+
Sbjct: 67 QKSTLSQHMRTHTGDKPYKCDQCDYSAAQKSSLNQHL 103
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 22/115 (19%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPC------------------MVR 79
+M P C HC + NL L +HS++ P + R
Sbjct: 154 HMRTNTGEKPYKCDHCDYSATRKSNLDRHLAQHSDDKPYKCDQCDYSAEQKSHLDQHLAR 213
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
K +ICV C Y T + H H G K +KC C Y A Q+ L+ H+
Sbjct: 214 HTGGK-PYICVECGYMTDRKPGLSRHMRTHTGYKPYKCDQCDYSAAQRSSLEHHL 267
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + +L L +H+ N P ++C C Y T
Sbjct: 238 HMRTHTGYKPYKCDQCDYSAAQRSSLEHHLAKHTGNKP-----------YMCGECGYRTS 286
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ +H IH G+K +KC LC + A +K L H+
Sbjct: 287 KKSHLSDHMRIHTGEKPYKCDLCDFSAAKKSNLDQHL 323
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T ++ NH H G+K +KC C Y A QK L H+
Sbjct: 1 MCGECGYRTAKKSHLSNHMRTHTGEKPYKCDQCDYSAAQKNNLDQHL 47
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H H GDK + C C Y QK L H++
Sbjct: 28 YKCDQCDYSAAQKNNLDQHLAKHAGDKPYMCGECGYRTTQKSTLSQHMR 76
>gi|260787891|ref|XP_002588985.1| hypothetical protein BRAFLDRAFT_89176 [Branchiostoma floridae]
gi|229274157|gb|EEN44996.1| hypothetical protein BRAFLDRAFT_89176 [Branchiostoma floridae]
Length = 1337
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++ + L EH+ R + + C CDY N+ H +H
Sbjct: 455 PYMCGEC-GYRAARKSQLSEHT-------RTHTGEKPYKCDQCDYSAAQKSNLNQHVAMH 506
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
GDK + C C Y A QK L H++
Sbjct: 507 TGDKPYMCGECGYRAMQKSTLTIHMRT 533
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++ + L EH+ R + + C CDY N+ H +H
Sbjct: 1011 PYMCGEC-GYRAARKSQLSEHT-------RTHTGEKPYKCDQCDYSAAQKSNLNQHVAMH 1062
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
GDK + C C Y A QK L H++
Sbjct: 1063 TGDKPYMCGECGYRAMQKSTLTIHMRT 1089
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H G+K +KC C Y A QK L H+
Sbjct: 57 YMCGECGYRTALKAHLSRHMRTHTGEKPYKCDQCDYSAAQKSSLDLHL 104
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + + H H G++ +KC C Y A +K L H+
Sbjct: 169 YMCGECGYRTALKSTLSRHMRTHTGERPYKCDHCDYSAAKKNHLDRHL 216
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H IH GDK + C C Y A QK L H++
Sbjct: 596 YKCDQCDYSATRKHHLDQHLAIHTGDKPYMCGECGYRAAQKCTLSQHMR 644
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T + H H GDK +KC C Y A +K L H+
Sbjct: 372 YMCGECGFRTAYRSALSRHMTTHSGDKPYKCGECGYRAARKSTLSQHM 419
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T + H H GDK +KC C Y A +K L H+
Sbjct: 928 YMCGECGFRTAYRSALSRHMTTHSGDKPYKCGECGYRAARKSTLSQHM 975
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H H G+K +KC C Y A QK L H+
Sbjct: 113 YMCGECGYRAAWESHFFRHMRTHTGEKPYKCDQCDYSAAQKSSLDLHL 160
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + + H H G+K +KC C Y A +K L H+
Sbjct: 568 YMCGECGYRTAKNSELSRHMRTHTGEKPYKCDQCDYSATRKHHLDQHL 615
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T + +H H G+K +KC C Y A QK L H+
Sbjct: 316 YRCGECGYRTAQKSQLSDHMRTHTGEKPYKCDQCDYTAVQKSTLYKHL 363
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T + +H H G+K +KC C Y A QK L H+
Sbjct: 872 YRCGECGYRTAQKSQLSDHMRTHTGEKPYKCDQCDYTAVQKSTLYKHL 919
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY ++ H H GDK F C C Y A QK L H++
Sbjct: 652 YKCDQCDYSAAQKCHLDYHLAKHTGDKPFMCGECGYRAAQKSTLNVHMRT 701
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M+ + P C C + L ++ H+ N P + C CDY T
Sbjct: 390 HMTTHSGDKPYKCGECGYRAARKSTLSQHMITHTGNKP-----------YKCDQCDYSTA 438
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ H H GDK + C C Y A +K +L H +
Sbjct: 439 RKFCLDQHQAKHTGDKPYMCGECGYRAARKSQLSEHTRT 477
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M+ + P C C + L ++ H+ N P + C CDY T
Sbjct: 946 HMTTHSGDKPYKCGECGYRAARKSTLSQHMITHTGNKP-----------YKCDQCDYSTA 994
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ H H GDK + C C Y A +K +L H +
Sbjct: 995 RKFCLDQHQAKHTGDKPYMCGECGYRAARKSQLSEHTRT 1033
>gi|256078806|ref|XP_002575685.1| zinc finger protein [Schistosoma mansoni]
Length = 335
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 53 CKHCKNFTSSDVNL----LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
C++CK S V+L + H++N P F C C Y T+ +++ H
Sbjct: 228 CEYCKREFSQKVHLQKHIMSTHTKNKP-----------FKCSICSYQTVEKSHLKTHFRK 276
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
H G+K F C LC+Y A Q L+ H KH
Sbjct: 277 HTGEKPFSCTLCTYRAAQHSTLKQHCIKKH 306
>gi|260810909|ref|XP_002600165.1| hypothetical protein BRAFLDRAFT_66673 [Branchiostoma floridae]
gi|229285451|gb|EEN56177.1| hypothetical protein BRAFLDRAFT_66673 [Branchiostoma floridae]
Length = 866
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C T+ + L+ +R + F C CDY N+ H H
Sbjct: 656 PYKCEECDYRTARKLTLVRH--------LRTHTGEKPFKCDQCDYSAARKYNLDRHKRTH 707
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K F C LC +G ++ L H+++
Sbjct: 708 TGEKTFMCELCGFGTNKRSALSVHIRS 734
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C + ++ + + +++HS P + C CDY T + H H G+
Sbjct: 461 CDYSASWKAGIIQHMVKHSSERP-----------YKCEECDYRTARKLTLVRHLRTHTGE 509
Query: 113 KQFKCCLCSYGAYQKEKLQFH-VKNKHSTK 141
K FKC C Y A +K L H + N H++K
Sbjct: 510 KPFKCDQCDYSAARKYNLDRHKLSNTHTSK 539
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 16/131 (12%)
Query: 11 PLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEH 70
P + +C C +Y S + H M+ + P C HC +F+S+ N L++H
Sbjct: 367 PGLKRYSCEQC-EYTASKKSLLTSH------MTKHSGEKPYKCDHC-DFSSAWKNCLVQH 418
Query: 71 SENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
MV+ K + C C Y + H H G+K FKC C Y A K +
Sbjct: 419 ------MVKHTAEK-GYTCDQCGYRNASKAKLSVHMRKHTGEKPFKCDQCDYSASWKAGI 471
Query: 131 QFHVKNKHSTK 141
H+ KHS++
Sbjct: 472 IQHM-VKHSSE 481
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 23 KYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDP 82
+Y S + H M+ + P C HC +F+S+ N L++H MV+
Sbjct: 200 EYTASKKSLLTSH------MTKHSGAKPYKCDHC-DFSSAWKNCLVQH------MVKHTA 246
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
K + C C Y + H H G+K +KC C Y A K + H+
Sbjct: 247 EK-GYTCDQCGYRNASKAKLSVHMRKHTGEKPYKCDQCDYSASWKAGIIQHM 297
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ + P C HC +F+S+ N L++H MV+ K + C C Y
Sbjct: 563 HMTKHSGEKPYKCDHC-DFSSAWKNCLVQH------MVKHTAEK-GYTCDQCGYRNASKA 614
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K FKC C Y A K + H+
Sbjct: 615 KLSVHMRKHTGEKPFKCDQCDYSASWKAGIIQHM 648
Score = 35.0 bits (79), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H G+K +KC C + A +K + H+
Sbjct: 124 YMCGECGYRTAVRNFLKRHMAKHTGEKPYKCDKCDFSAARKYNVDRHM 171
>gi|410906423|ref|XP_003966691.1| PREDICTED: zinc finger protein 513-like [Takifugu rubripes]
Length = 533
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC +TSS ++ L H +R + + C +C Y N+R H IH
Sbjct: 395 PHHCPHCA-YTSSHLDNLKRH-------LRVHTGEKPYQCPSCSYACGNLANLRRHERIH 446
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G K F C +CSY Q L+ H+
Sbjct: 447 SGAKPFHCGVCSYSCNQSMNLKRHM 471
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C + + S +++ H IH G K ++C +C Y + Q LQ H + K
Sbjct: 163 YSCSVCTFSSHYSNHLKRHMRIHDGQKPYRCPVCPYASAQLVNLQRHARTHTGEK 217
>gi|449486830|ref|XP_004174322.1| PREDICTED: taste receptor type 1 member 1-like [Taeniopygia
guttata]
Length = 1265
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C NLL + NC M R + V F C AC +R H + H
Sbjct: 895 PFECSKCGKCYFRKENLLEHEARNC--MNRSEQV---FTCSACPEVFKRRMELRLHMVSH 949
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
G+ +KC CS QK++LQ H+ H
Sbjct: 950 TGEMPYKCSSCSQQFMQKKELQSHMIKLH 978
>gi|260806167|ref|XP_002597956.1| hypothetical protein BRAFLDRAFT_79800 [Branchiostoma floridae]
gi|229283226|gb|EEN53968.1| hypothetical protein BRAFLDRAFT_79800 [Branchiostoma floridae]
Length = 512
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C +C ++++++ L H RP C CDY + + ++ H H
Sbjct: 38 PYKCTYC-DYSAAENAQLKNHVMAKHTNTRP------HKCTLCDYSAVEKKRLKFHMATH 90
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC CS+ +QK+ L+ HV
Sbjct: 91 TGEKPYKCEFCSFATHQKQNLKSHV 115
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C + T QN+++H L H DK +KC +C Y A Q+ L+ H+
Sbjct: 96 YKCEFCSFATHQKQNLKSHVLTHSADKPYKCQVCDYSAIQRGALKIHM 143
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C C+Y TI M H H G+K FKC C Y A Q L+ H++ H+
Sbjct: 162 CPHCEYETINKPAMTQHIRTHTGEKPFKCQQCDYSASQTATLKKHIRAVHTA 213
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY T+ ++ H H G+K F C LC Y A +K L+ H+ N
Sbjct: 317 YKCEICDYSTVGMSYLKLHMANHTGEKPFHCELCEYSAARKPDLKKHMAN 366
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C CDY +++ H H G+K +KC +C Y A Q L+ H+
Sbjct: 375 CELCDYSATDRSHLKRHMTTHTGEKPYKCEICEYAAAQISSLRDHM 420
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C CDY + ++++ H H GDK +KC +C + ++K L+ H+
Sbjct: 235 CTLCDYSAVEKKHLKFHMATHTGDKPYKCEMCPFATHRKMFLKKHM 280
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C C+Y +++ H H G+K KC LC Y A + L+ H+
Sbjct: 345 FHCELCEYSAARKPDLKKHMANHTGEKPHKCELCDYSATDRSHLKRHM 392
>gi|148679349|gb|EDL11296.1| CCCTC-binding factor, isoform CRA_d [Mus musculus]
Length = 638
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|148674679|gb|EDL06626.1| mCG124713 [Mus musculus]
Length = 558
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + M+ H H G++ F+CC C+Y + KL+ H++ K
Sbjct: 342 FKCSLCKYASVEASKMKRHIRSHTGERPFQCCQCAYASRDSYKLKRHMRTHSGEK 396
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
KF C CDY + ++ H +H G+K F C C+ QK+ L H++ H
Sbjct: 485 KFKCKQCDYACKQERCLKAHMRMHTGEKPFSCLACNKHFRQKQLLTVHLRKYH 537
>gi|260810735|ref|XP_002600105.1| hypothetical protein BRAFLDRAFT_203949 [Branchiostoma floridae]
gi|229285391|gb|EEN56117.1| hypothetical protein BRAFLDRAFT_203949 [Branchiostoma floridae]
Length = 447
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P +C C F + D L H +P F C CDY T+ N+ H +H
Sbjct: 359 PYTCCEC-GFRTGDKTTLYRHMRTHTTGQKP------FNCELCDYSTVRKDNLSRHVTLH 411
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K F C C Y + L H++
Sbjct: 412 TGEKPFMCGECGYRTADRSSLTVHLR 437
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H H G+K +KC C Y +K+ L HV NKH+
Sbjct: 303 YMCGECGYRTTTKSYLTTHMTKHTGEKPYKCDQCEYSTARKDDLSRHVANKHT 355
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CDY + +++ H H GDK ++C C Y L+ H+K KH+
Sbjct: 90 YKCDQCDYSSARKNDLKRHIARHTGDKPYQCGECGYRLADMSCLRKHIKRKHT 142
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ V P C C +++++ L H M + VK ++C C Y T
Sbjct: 209 HMAKHTGVKPYMCGEC-DYSAAQEYSLKRH------MAKHTGVK-PYMCGECGYRTANRS 260
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H H G+K +KC C Y A Q+ L+ H+ N
Sbjct: 261 SLTLHMRKHTGEKPYKCDKCDYSAAQECNLRRHMAN 296
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F C C Y T + +++ H H G+K +KC C + A +K+ H+
Sbjct: 5 RFACRKCHYSTTLKKSILRHARTHTGEKPYKCDQCDFSAARKDCFDQHM 53
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T + H H G+K +KC C Y + +K L+ H+
Sbjct: 62 LMCGECGYRTAQRSHFSEHMRTHTGEKPYKCDQCDYSSARKNDLKRHI 109
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C CD+ T + H H G+K +KC C Y A Q+ L+ H+
Sbjct: 164 VCADCDFGTDSKSDFVKHIRKHAGEKPYKCDKCDYSAAQEYNLKRHM 210
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+R + + C CDY N++ H H G K + C C Y A Q+ L+ H+
Sbjct: 182 IRKHAGEKPYKCDKCDYSAAQEYNLKRHMAKHTGVKPYMCGECDYSAAQEYSLKRHM 238
>gi|260782916|ref|XP_002586526.1| hypothetical protein BRAFLDRAFT_249317 [Branchiostoma floridae]
gi|229271641|gb|EEN42537.1| hypothetical protein BRAFLDRAFT_249317 [Branchiostoma floridae]
Length = 258
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + N+ H H GD+ +KC C Y A +K L HV KHS
Sbjct: 7 YMCGECGYRTAYNSNLSRHMRTHTGDRPYKCDQCDYSALRKSSLDQHV-AKHS 58
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T+ ++ H IH G+K +KC C Y A QK L H+
Sbjct: 119 YMCGECGYRTVQKCHLSQHMRIHTGEKPYKCDQCDYSASQKSHLDDHL 166
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 14/102 (13%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVAC 92
C +M P C C S +L L H+ + P ++C C
Sbjct: 132 CHLSQHMRIHTGEKPYKCDQCDYSASQKSHLDDHLASHTGDKP-----------YMCGEC 180
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
Y T + H H G+K +KC C Y A +K L H+
Sbjct: 181 GYRTDRKSTLSRHMRRHTGEKPYKCDQCDYSASRKSTLDQHL 222
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H G K +KC C Y A K L H+
Sbjct: 63 YMCRECGYRTARTSDLSEHLRTHTGRKPYKCDQCDYSAAHKYILDRHL 110
>gi|225581102|gb|ACN94675.1| GA18360 [Drosophila miranda]
Length = 735
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRP-----DPVKYKFICVACDYFTIISQNMRNHTL 107
C C + N+ H+ P P P C Y T +MR H
Sbjct: 53 CHLCWYSSDKASNIKRHHNNRHPGCEAPAYNSIKPAAIVCYVTGCTYSTNRPYDMRRHLT 112
Query: 108 IH----LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+H GDK FKC LC+Y + +K L+ HV +HS
Sbjct: 113 VHNNPLRGDKAFKCLLCTYSSERKGNLRRHVDLRHS 148
>gi|260809347|ref|XP_002599467.1| hypothetical protein BRAFLDRAFT_281209 [Branchiostoma floridae]
gi|229284746|gb|EEN55479.1| hypothetical protein BRAFLDRAFT_281209 [Branchiostoma floridae]
Length = 412
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + NL L +H+ P ++C C Y T + H
Sbjct: 300 PYKCDQCNYSAAKKSNLDRHLFQHTGEKP-----------YMCWECGYRTARKSRLSQHM 348
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K +KC LC Y A QK L HV
Sbjct: 349 RTHTGEKPYKCELCDYSAAQKTSLDHHV 376
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T + N+ H H G+K +KC LC Y A +K L H+ +KH+
Sbjct: 189 YMCGECGFKTALKSNLSQHMRTHTGEKPYKCDLCEYSAARKSSLYLHL-SKHT 240
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
IC C Y T + + +H H G+K +KC C Y A K L FHV
Sbjct: 133 LICGECGYRTALKSCLSSHMRTHTGEKPYKCDQCDYSAAHKTTLDFHV 180
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
++S P C C+ T+ NL + ++ + ++C C Y T I
Sbjct: 235 HLSKHTGEKPYKCGECEYRTAKKSNLSLH--------MKTHTGEKPYMCEKCGYKTAIKS 286
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC C+Y A +K L H+
Sbjct: 287 HLFQHIRTHTGEKPYKCDQCNYSAAKKSNLDRHL 320
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y T ++ H H GDK + C C Y A Q+ L H++
Sbjct: 21 YLCGECGYRTTNRSHLTKHIRTHTGDKPYMCGECGYRAAQRSTLSIHMRT 70
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 21/48 (43%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H H G+K F C C Y A QK L HV
Sbjct: 49 YMCGECGYRAAQRSTLSIHMRTHTGEKPFMCEQCDYSAAQKSSLDLHV 96
>gi|198475086|ref|XP_001356923.2| GA18360 [Drosophila pseudoobscura pseudoobscura]
gi|198138671|gb|EAL33989.2| GA18360 [Drosophila pseudoobscura pseudoobscura]
Length = 731
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRP-----DPVKYKFICVACDYFTIISQNMRNHTL 107
C C + N+ H+ P P P C Y T +MR H
Sbjct: 53 CHLCWYSSDKASNIKRHHNNRHPGCEAPAYKSIKPAAIVCYVTGCTYSTNRPYDMRRHLT 112
Query: 108 IH----LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+H GDK FKC LC+Y + +K L+ HV +HS
Sbjct: 113 VHNNPLRGDKAFKCLLCTYSSERKGNLRRHVDLRHS 148
>gi|449268135|gb|EMC79005.1| Zinc finger protein 281, partial [Columba livia]
Length = 804
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + +C C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 167 PSQKPHVCEHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 220
>gi|427784679|gb|JAA57791.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 194
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 55/144 (38%), Gaps = 18/144 (12%)
Query: 2 EHWEQCLLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPN-MSFLNSVIPQSCKHCKN-- 58
E QC L ST K N V + C+ CP L S CKH
Sbjct: 54 ERLFQCHLCQYSTPKPRRLKNHLVSHSAEKPF-QCEVCPAAFKSLESYKAHMCKHTGEVP 112
Query: 59 -------FTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
+T+S L++H R F C C Y T N+ H L H
Sbjct: 113 YQCHLCPYTTSYYKRLLDHK-------RSHLNTMPFACNMCTYRTKRKANLHMHKLNHTR 165
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVK 135
DK FKC +CS+G QK L+ H++
Sbjct: 166 DKPFKCKVCSFGYNQKRYLKIHMQ 189
>gi|74148592|dbj|BAE24263.1| unnamed protein product [Mus musculus]
Length = 596
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 350 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 401
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 402 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 434
>gi|391341780|ref|XP_003745205.1| PREDICTED: zinc finger protein 394-like [Metaseiulus occidentalis]
Length = 140
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 75 PCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
P M + DP+ +++C C Y T+ ++ H H G++ FKC CSY A
Sbjct: 40 PQMDQRDPMTGRYVCKYCSYSTVQRTHLARHERSHTGERPFKCQFCSYKA 89
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y + + NH H G+K +KC C+Y A QK L+ H K
Sbjct: 80 FKCQFCSYKATLKTCLINHERTHTGEKPYKCKFCNYCASQKVTLERHQK 128
>gi|260810935|ref|XP_002600178.1| hypothetical protein BRAFLDRAFT_66686 [Branchiostoma floridae]
gi|229285464|gb|EEN56190.1| hypothetical protein BRAFLDRAFT_66686 [Branchiostoma floridae]
Length = 1052
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 14/95 (14%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C HC ++S +L ++ H+ P ++C C Y +R+H
Sbjct: 604 PYKCDHCDYSSASKSSLDAHILTHTGEKP-----------YMCGECGYRATQLSTLRSHM 652
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
H G+K +KC C Y A QK L H H K
Sbjct: 653 KKHTGEKPYKCDQCDYSAAQKSSLYLHKAKHHGDK 687
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 18/102 (17%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSE--NCPCMVRPDPVKYK---------------FICVAC 92
P CK C + S+ + L++H E N + DP K F+C C
Sbjct: 688 PYKCKQC-GYRSTQRSSLLQHLEEHNGEKSCKRDPPKVSGSTKNDKIAHANEKPFMCGEC 746
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
T ++ H IH G+K +KC C + A +K L H+
Sbjct: 747 GLRTTDGSSLAQHMKIHAGEKAYKCDQCEFTAARKRSLDIHL 788
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y I + H + H G+K +KC C Y + K L H+
Sbjct: 577 FVCGECGYRAPILSGLSRHMMTHTGEKPYKCDHCDYSSASKSSLDAHI 624
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 61 SSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC 120
S D+++ M+H+ P + C CDY T ++ H H G+K KC C
Sbjct: 837 SLDIHVAMKHTGEKP-----------YACDLCDYATAYEVYLKQHKFTHTGEKPHKCKQC 885
Query: 121 SYGAYQKEKLQFHVKNKHSTKVK 143
+ + + L+ H++ +H+ +++
Sbjct: 886 DFSSAWRSNLEDHMR-RHAGQIQ 907
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
K +F C C + T + + H IH ++++KC C Y +K+ L HV KH+
Sbjct: 963 KKRFACDKCRFKTTVKAYLTKHMRIHSDNRRYKCDHCDYSTARKDNLNNHVIVKHT 1018
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 86 KFICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ C CDY T N+ NH ++ H +K +KC C Y +K+ L H+
Sbjct: 993 RYKCDHCDYSTARKDNLNNHVIVKHTKEKPYKCDHCGYSTVRKDSLIKHL 1042
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+IC C Y T + H IH K +KC C Y A K L HV KH+
Sbjct: 797 YICGECGYKTTKKSALSRHLTIHT--KPYKCDECDYSASLKRSLDIHVAMKHT 847
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDK--QFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T Q++ H +H G K + C C YG K L H++
Sbjct: 425 YVCEECGYRTANKQHLSRHMKLHSGKKVSNYMCSECGYGPAAKSTLSIHMR 475
>gi|47212479|emb|CAF90275.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P SC HC +++S L++H +R + F C C Y +I
Sbjct: 10 HMGVHRGDKPFSCPHC-SYSSRLKASLLQH-------LRTHTGERPFGCPECAYASIDRS 61
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H H +K ++C CSY + QK+ L H + H+ +
Sbjct: 62 SLLRHYRTHSQEKPYRCQQCSYSSIQKKSLDLHARRHHTGE 102
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACD--YFTIISQ-NMRNHTLIH 109
C+ C+ ++S D LL+ H + + + + + ++C + S+ +R H +H
Sbjct: 106 CQQCE-YSSPDRQLLLRHGRSLKNISQKKAEEVRQAALSCSVCHRKFSSKLTLRRHMGVH 164
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
GDK F C CSY + K L H++
Sbjct: 165 RGDKPFSCPHCSYSSRLKASLLQHLRT 191
>gi|395506791|ref|XP_003757713.1| PREDICTED: transcriptional repressor CTCFL [Sarcophilus harrisii]
Length = 607
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F CCLCSY + KL+ H++ K
Sbjct: 299 FKCSMCKYASVEASKLKRHIRSHTGERPFHCCLCSYASKDTYKLKRHMRTHSGEK 353
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H +R + F C C Y + + ++ H H
Sbjct: 298 PFKCSMCK-YASVEASKLKRH-------IRSHTGERPFHCCLCSYASKDTYKLKRHMRTH 349
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 350 SGEKPYECYVCHARFTQSGTMKIHILQKHSENV 382
>gi|260806366|ref|XP_002598055.1| hypothetical protein BRAFLDRAFT_253031 [Branchiostoma floridae]
gi|229283326|gb|EEN54067.1| hypothetical protein BRAFLDRAFT_253031 [Branchiostoma floridae]
Length = 227
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M + P C C N++++ + L +H +R + + C CDY T
Sbjct: 131 HMRTHTGIKPYKCDQC-NYSTAQKSNLSQH-------MRNHSGEKPYKCNQCDYTTAWKS 182
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+ +H H G+K + C C Y +K L HV+
Sbjct: 183 NLNHHVKTHTGEKPYMCGECGYSTAKKSHLTEHVR 217
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y ++ H H G+K +KC C Y A +K + H+ KH+
Sbjct: 56 YMCGECGYRAARKYHLSQHMRTHTGEKPYKCDQCDYSAARKADVDSHIAAKHT 108
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
V+ ++C C Y + + H H G K +KC C+Y QK L H++N
Sbjct: 109 VEKPYMCGECGYRAVKKSTLSRHMRTHTGIKPYKCDQCNYSTAQKSNLSQHMRN 162
>gi|410913241|ref|XP_003970097.1| PREDICTED: transcriptional repressor CTCF-like [Takifugu rubripes]
Length = 760
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 358 FKCSMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 412
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 357 PFKCSMC-DYSSVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 408
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 409 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 441
>gi|260823114|ref|XP_002604028.1| hypothetical protein BRAFLDRAFT_71682 [Branchiostoma floridae]
gi|229289353|gb|EEN60039.1| hypothetical protein BRAFLDRAFT_71682 [Branchiostoma floridae]
Length = 927
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y ++ ++ H H G+K +KC C Y A QK L HV+ KHS +
Sbjct: 104 YMCGECGYRSVQKSDLSRHMRTHTGEKPYKCDQCDYSAAQKSTLDQHVR-KHSGE 157
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++ ++D + L+ H +R + ++C C Y
Sbjct: 717 HMRTHTGERPYKCDQC-DYCAADKSTLVRH-------IRKHTDEKPYMCGECGYRAAQKS 768
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H IH G+K +KC C Y A QK L H+
Sbjct: 769 HLSAHMRIHTGEKPYKCDQCDYSAGQKSDLDRHL 802
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T+ + H IH G+K +KC C Y A +K L H++
Sbjct: 216 YMCGECGYRTVERSTLSRHMRIHTGEKPYKCDQCDYSATEKSSLVKHIR 264
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M + P C C +++++ ++ L+ H N P ++C C Y
Sbjct: 829 HMRTHTAEKPYKCDQC-DYSAAQISHLVRHLSN---HSNDKP----YMCGVCGYRAAQKS 880
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H H G+K +KC C Y A QK L HV N
Sbjct: 881 HLSAHMRTHTGEKPYKCDQCDYSAAQKGTLDDHVAN 916
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++++ + L++H +R + ++C C + T +
Sbjct: 234 HMRIHTGEKPYKCDQC-DYSATEKSSLVKH-------IRKHTGEKPYMCGECGFRTAMKC 285
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+ H H G+K +KC C Y A K L H++
Sbjct: 286 NLSVHIRSHTGEKPYKCDQCEYSAAHKSTLDQHIE 320
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y Q++ H H G+K +KC C Y A QK L H+
Sbjct: 328 FMCGECGYRAAQWQHLYRHMRTHTGEKPYKCEQCDYSAAQKGHLDRHL 375
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H IH GDK + C C Y A +K L H++
Sbjct: 783 YKCDQCDYSAGQKSDLDRHLTIHTGDKPYMCGECGYRAARKSHLSQHMR 831
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C + T N+ H H G+K +KC C Y A QK L H+ S K
Sbjct: 643 YMCEECGFRTSRKFNLSAHMRTHTGEKPYKCDQCDYSAAQKSDLNKHLAKHTSEK 697
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L +H VR + ++C C Y
Sbjct: 122 HMRTHTGEKPYKCDQC-DYSAAQKSTLDQH-------VRKHSGENPYMCGECGYRAGKKS 173
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H H G+K +KC C Y A QK L H+ KHS +
Sbjct: 174 HLFRHMRTHTGEKPYKCDQCDYSAAQKCDLDKHIA-KHSGE 213
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C+ C + +L LM+H+ P F+C C Y T
Sbjct: 346 HMRTHTGEKPYKCEQCDYSAAQKGHLDRHLMKHTGEKP-----------FMCDECGYRTA 394
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
+ H H G+K KC C + A QK L H + +HS +
Sbjct: 395 RKSTLIRHMRSHSGEKPHKCYQCDFSAAQKHHLINH-QTRHSMRA 438
>gi|260823136|ref|XP_002604039.1| hypothetical protein BRAFLDRAFT_71671 [Branchiostoma floridae]
gi|229289364|gb|EEN60050.1| hypothetical protein BRAFLDRAFT_71671 [Branchiostoma floridae]
Length = 1052
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C + T N+ H H G+ +KC +C Y A QK L+ H KH+ K
Sbjct: 262 YMCGECGFRTAQKANLSKHMRTHTGENPYKCDMCDYSAIQKVHLKQHAAAKHTGK 316
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI- 108
P C C T+ NL S++ +P K C CDY I +++ H
Sbjct: 261 PYMCGECGFRTAQKANL----SKHMRTHTGENPYK----CDMCDYSAIQKVHLKQHAAAK 312
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G K FKC C Y A QK +L H+ KHS
Sbjct: 313 HTGKKPFKCDQCDYSAAQKARLTKHIAAKHS 343
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ ++C C+Y T+ + +H H G+K FKC C+Y K L+ HV +H+
Sbjct: 710 EFPYMCGECEYGTLRKSHFSDHMRTHTGEKPFKCDQCNYSTILKSYLKRHVSRQHN 765
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ P C HC +++++ + L EH ++ + F+C C Y T
Sbjct: 788 HMTKHTGERPYKCDHC-DYSAARKSSLDEH-------LQIHSGEKPFMCGECGYRTAKKS 839
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K FKC C Y A K L H+
Sbjct: 840 RLARHMRTHTGEKPFKCDQCDYSAALKSHLNEHI 873
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + + H H G+K +KC C Y A QK L H+ KH+
Sbjct: 600 YVCCECGYRAVKKSRLAIHMRTHTGEKPYKCEQCDYTAAQKTNLDQHIATKHT 652
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 9 LVPLSTKKT--CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL 66
+V L+++K C C KY S F H + +++ P C C +F+++ ++
Sbjct: 424 VVKLTSEKVFMCGEC-KYKTSKEKRFFKHMR-------IHTAKPFKCDKC-DFSAAQKSI 474
Query: 67 LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQ 126
L +H +V+ K ++C C + T + H H G+K +KC C Y A Q
Sbjct: 475 LDKH------LVKHTGEK-PYMCGECGHRTTHKSYLSKHMRTHTGEKPYKCDQCDYSAAQ 527
Query: 127 KEKLQFHV 134
K L FH+
Sbjct: 528 KSTLDFHL 535
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C T+ NL + +R + + C CD+ I + H + H
Sbjct: 543 PYMCGECGYRTAKKCNLSLH--------MRTHTGEKPYKCDQCDFSAIRKSTLDFHLVKH 594
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
GDK + CC C Y A +K +L H++
Sbjct: 595 TGDKPYVCCECGYRAVKKSRLAIHMRT 621
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C + + ++ H H G++ +KC C Y A QK +L H KH+
Sbjct: 994 FVCGECGFRAGRNCDLSRHMRTHTGERPYKCDHCDYAAAQKTRLNQHRLAKHT 1046
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 87 FICVACDYFTIISQNMRNH-TLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C C+Y TI+ ++ H + H GDK + C C Y A +K+KL H+
Sbjct: 741 FKCDQCNYSTILKSYLKRHVSRQHNGDKPYMCGECGYRAARKDKLSQHM 789
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G+K +KC C Y A +K L H+
Sbjct: 882 YMCGECGYRTAKKSRLTIHMRTHTGEKPYKCDQCDYSAAEKSALTRHL 929
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H G+K FKC C + A QK L H+
Sbjct: 367 YMCEECGYRAAQKYHLSRHMRTHTGEKPFKCDQCDFSAAQKSTLDKHL 414
>gi|260823010|ref|XP_002603976.1| hypothetical protein BRAFLDRAFT_71736 [Branchiostoma floridae]
gi|229289301|gb|EEN59987.1| hypothetical protein BRAFLDRAFT_71736 [Branchiostoma floridae]
Length = 850
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C+ + +L +++ +P F+C C Y
Sbjct: 485 HMRIHTGEKPHKCDQCEYSAARKSHLKRHVAKHTATGEKP------FMCGECGYRATQKS 538
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++ H H GDK +KC C Y A QK L H++
Sbjct: 539 DLSKHMRTHTGDKPYKCDQCDYSAAQKPHLDRHLR 573
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 14/102 (13%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLM---EHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + +NL+ +HS P +IC C+Y T
Sbjct: 739 HMKAHTGEKPYKCDLCDYSAAQKINLVQHTTKHSGQKP-----------YICGECEYKTT 787
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H IH G+K + C C Y A K L H+ KH+
Sbjct: 788 NKSHLSRHMKIHTGEKPYMCDQCDYSAAHKSNLDRHIAAKHT 829
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+IC C Y T ++ H IH G+K KC C Y A +K L+ HV +T K
Sbjct: 467 YICGECGYRTARKSDLSQHMRIHTGEKPHKCDQCEYSAARKSHLKRHVAKHTATGEK 523
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y ++ H H G+K +KC C Y A +K L H KHS
Sbjct: 84 YMCGECGYRVAQKSDLTRHMRTHTGEKPYKCDQCDYSAARKSTLDNHTLAKHS 136
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T + H H G+K +KC LC Y A QK L H KHS +
Sbjct: 721 YMCGECGYRTAQRSTLSRHMKAHTGEKPYKCDLCDYSAAQKINLVQHT-TKHSGQ 774
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + NH H GDK +KC C Y A K L H++
Sbjct: 665 YKCDQCDYSAAWKSTLDNHLAKHTGDKPYKCDQCHYSAANKSYLDRHLR 713
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H GDK +KC C + A QK L H+
Sbjct: 226 YMCGDCGYRTAKKSHLSRHMRTHTGDKPYKCDQCDFSAAQKVHLDSHL 273
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C + + NLL+ +R + ++C C + + ++ H H
Sbjct: 281 PYICEECGHRAAQKSNLLIH--------MRTHTGEKPYMCGECGHRAVQKSHLMVHMRTH 332
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K +KC C Y A QK H KH++K
Sbjct: 333 TGEKPYKCDQCDYSAAQKSTFNRHF-GKHTSK 363
>gi|426392250|ref|XP_004062469.1| PREDICTED: transcriptional repressor CTCFL isoform 5 [Gorilla
gorilla gorilla]
Length = 613
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ +++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGVHMRN 399
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+F C C Y ++M H H G+K F C C+ QK+ L H + H
Sbjct: 435 RFKCKHCSYACKQERHMTAHIRTHTGEKPFTCLFCNKCFRQKQLLNAHFRKYH 487
>gi|158299730|ref|XP_319775.4| AGAP009025-PA [Anopheles gambiae str. PEST]
gi|157013658|gb|EAA14992.4| AGAP009025-PA [Anopheles gambiae str. PEST]
Length = 989
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 76 CMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ R + ++ K+ C CD+ T I ++R H L+H G K F C C Y E L+ HV
Sbjct: 886 ALFRHEELEKKYKCDQCDFATHIPGHLRRHLLVHSGSKPFSCPHCDYSCNNIENLRKHV 944
>gi|260832638|ref|XP_002611264.1| hypothetical protein BRAFLDRAFT_73340 [Branchiostoma floridae]
gi|229296635|gb|EEN67274.1| hypothetical protein BRAFLDRAFT_73340 [Branchiostoma floridae]
Length = 426
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M V P C C +++++ + L +H MVR K F+C C Y T
Sbjct: 196 HMRTHTGVKPYKCDQC-DYSATTKSYLDKH------MVRHTGEK-PFMCGDCGYRTAFRS 247
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++ H H G+K +KC C++ A +KE L H
Sbjct: 248 SLSKHMRTHTGEKPYKCDQCNFSAAKKENLDQH 280
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY T N+ H IH GDK F C C Y K L H++
Sbjct: 150 YKCDQCDYSTAQKSNLDRHMAIHTGDKSFMCGECGYRVADKYTLTVHMR 198
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M V P C C ++++++ + L EH M + K ++C C Y T
Sbjct: 28 HMRTHTGVKPYKCDQC-DYSAAEKSNLDEH------MAKHTGEK-PYMCGECGYRTAFRS 79
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G K +KC C + A QK L H+
Sbjct: 80 NLSVHMRTHTGAKPYKCDQCDFSAAQKSNLDQHM 113
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 8/101 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C NF+++ L +H P ++C C Y T
Sbjct: 252 HMRTHTGEKPYKCDQC-NFSAAKKENLDQHKAT---HTGEKP----YMCGECGYRTARKP 303
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
N+ H + H G+K F C C Y K L H++ K
Sbjct: 304 NLSRHMIKHTGEKPFVCGECGYKTAHKSNLTKHIRRHRGVK 344
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C T+ NL +++H+ P F+C C Y T N+ H
Sbjct: 289 PYMCGECGYRTARKPNLSRHMIKHTGEKP-----------FVCGECGYKTAHKSNLTKHI 337
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G K +KC C + A QK L H+
Sbjct: 338 RRHRGVKPYKCHQCDFSAAQKGDLDQHM 365
>gi|260827377|ref|XP_002608641.1| hypothetical protein BRAFLDRAFT_97683 [Branchiostoma floridae]
gi|229293993|gb|EEN64651.1| hypothetical protein BRAFLDRAFT_97683 [Branchiostoma floridae]
Length = 503
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
K +C C Y T + ++ +H H G+K +KC LC Y A QK + HV +KH
Sbjct: 96 KKSLVCEECGYKTAVKSDLLSHIRRHTGEKPYKCDLCDYCAVQKSDVGKHVMSKH 150
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 28/113 (24%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL-- 107
P C C ++++++ N L EH +R K + +C C Y T + ++R+H
Sbjct: 305 PYKCDQC-DYSAANSNTLNEHK------LRHGGEK-RHVCEECGYKTAVKNDLRSHMRRH 356
Query: 108 ------------------IHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
IH G+K +KC C + + + L+ HV+ KH++ +
Sbjct: 357 TDEKPHKSIKPYLNKHMRIHSGEKPYKCDQCEFSSAHRGALKKHVRTKHTSDL 409
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ICV C Y T + N+ H H K +KC C Y + +K L+ H+ NKH+
Sbjct: 423 YICVECGYMTAVRANLSAHKRTHSSVKPYKCDKCEYSSTRKYCLKQHM-NKHT 474
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M NS C+ C + +++ N LM H + RP ++C C Y T+
Sbjct: 240 HMKTHNSEKAYICEQC-GYRTTEKNQLMRHQKR-HTGERP------YMCEHCGYRTLEKS 291
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+ H H G+K +KC C Y A L H
Sbjct: 292 RLMMHQRTHTGEKPYKCDQCDYSAANSNTLNEH 324
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + + H +H G+K +KC C Y A K L HV +HS
Sbjct: 156 YVCSECGHKMATKTQLTAHMKVHTGEKPYKCDQCDYCAASKAHLDKHVARRHS 208
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+HC T L+M R + + C CDY S + H L H
Sbjct: 277 PYMCEHCGYRTLEKSRLMMHQ--------RTHTGEKPYKCDQCDYSAANSNTLNEHKLRH 328
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K+ C C Y K L+ H++
Sbjct: 329 GGEKRHVCEECGYKTAVKNDLRSHMRR 355
>gi|391346127|ref|XP_003747330.1| PREDICTED: uncharacterized protein LOC100905253 [Metaseiulus
occidentalis]
Length = 1161
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C HC N + EH ++ ++ C+ C+Y T S ++ NH H +
Sbjct: 1045 CVHC--------NYITEHRSYLQRHMKAHAEGKRYQCLECEYRTARSDHLNNHMRTHTSE 1096
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKH 138
K F C C + Q+ L H+ +H
Sbjct: 1097 KPFSCNQCDFRCAQQATLYNHLNRRH 1122
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 76 CMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C + D + CV C+Y T ++ H H K+++C C Y + + L H++
Sbjct: 1032 CTKQDDAQEKALKCVHCNYITEHRSYLQRHMKAHAEGKRYQCLECEYRTARSDHLNNHMR 1091
Query: 136 NKHSTK 141
S K
Sbjct: 1092 THTSEK 1097
>gi|62089172|dbj|BAD93030.1| CCCTC-binding factor (zinc finger protein) variant [Homo sapiens]
Length = 443
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 67 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 121
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 66 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 117
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 118 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 150
>gi|345328272|ref|XP_001510594.2| PREDICTED: transcriptional repressor CTCFL [Ornithorhynchus
anatinus]
Length = 772
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 463 FQCTICKYASVEASKLKRHIRSHTGERPFRCRLCSYASRDTYKLKRHMRTHSGEK 517
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H +R + F C C Y + + ++ H H
Sbjct: 462 PFQCTICK-YASVEASKLKRH-------IRSHTGERPFRCRLCSYASRDTYKLKRHMRTH 513
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K ++C +C Q+ ++ H+ KH+
Sbjct: 514 SGEKPYECSVCQTKFTQRGTMKIHMLQKHT 543
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+F C CDY ++M H H G+K F C C+ QK L H + H
Sbjct: 606 RFKCGDCDYACKQERHMIVHKRTHTGEKPFSCLHCNKRFRQKRLLSVHFRKYH 658
>gi|260780797|ref|XP_002585526.1| hypothetical protein BRAFLDRAFT_89256 [Branchiostoma floridae]
gi|229270522|gb|EEN41537.1| hypothetical protein BRAFLDRAFT_89256 [Branchiostoma floridae]
Length = 818
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +F ++ + L++H V+ + K F+C CDY+T + NH H
Sbjct: 153 PYKCDQC-DFAATQASHLIKH-----VRVKHNGEK-PFVCNECDYWTADKATLTNHMRTH 205
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G++ +KC C Y A K + NKH TK
Sbjct: 206 TGERPYKCDQCDYSASGKGQF-----NKHMTK 232
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +F+++ +LL +H V+ + K F+C C+Y+T
Sbjct: 313 HMRTHTGEKPYKCDQC-DFSAAQSSLLKKH-----VRVKHNGEK-PFMCNECEYWTDNRT 365
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
N H H G++ +KC C Y A +K + H+ KH+ K+
Sbjct: 366 NFLTHLRKHTGERPYKCDQCDYAASEKGQFNRHM-TKHTGKM 406
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y S ++ +H H G+K +KC C + A Q L+ HV+ KH+
Sbjct: 295 FLCSECGYRARESSSLSSHMRTHTGEKPYKCDQCDFSAAQSSLLKKHVRVKHN 347
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 48 VIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL 107
V P +CK C+ F ++D L EH R + ++C C Y T S + H
Sbjct: 67 VKPYACKLCE-FKTADKETLSEHK-------RTHTEEKAYLCGECGYRTAHSSSFTRHKR 118
Query: 108 IHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K F C C Y + L H +
Sbjct: 119 KHTGEKPFLCDECGYRTRESSALSIHKR 146
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C T+S +L R + ++C C Y S ++ +H H
Sbjct: 618 PYLCEECGFRTASQASLTKH--------KRKHTGEKPYLCNECGYRARESSSLSSHMRTH 669
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
G+K +KC C + A Q L+ HV+ KH
Sbjct: 670 TGEKPYKCDQCDFSAAQSTSLKTHVRVKH 698
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 50 PQSCKHCKNFTSSDVNLL-------MEHSENCPCMVRPDPVKYKFICVACDYFTIISQNM 102
P C C +T + L E C +R K ++C C + T S +
Sbjct: 703 PFECNECGYWTDNRTTFLNHMRKHTGERPYKCNQHMRTHTGKKPYMCGECGFRTAHSATL 762
Query: 103 RNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H H GD+ + C C Y A +K L H +
Sbjct: 763 SRHQRTHTGDRPYVCGECGYRAAEKYHLSRHQR 795
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 8/102 (7%)
Query: 34 GHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACD 93
G Q +M+ V+P C C + ++ EH R + ++C C
Sbjct: 222 GKGQFNKHMTKHTGVMPFVCDEC-GYRTAYSGSFTEHK-------RMHTGEKPYLCEECG 273
Query: 94 YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
Y T + H H G+K F C C Y A + L H++
Sbjct: 274 YRTAHKSTLTRHKRKHTGEKPFLCSECGYRARESSSLSSHMR 315
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
++C C Y S + H H G+K +KC C Y A Q L+ HV+ KH
Sbjct: 520 YLCDECGYRARESSYLSIHKRTHTGEKPYKCDQCDYSAAQLPCLKNHVRVKH 571
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y T S ++ H + H G+K + C C + K L H K KH+
Sbjct: 408 FVCEECGYKTAASTSLTRHKMTHTGEKPYMCGECGFRTAHKCALTRH-KRKHT 459
>gi|260786903|ref|XP_002588496.1| hypothetical protein BRAFLDRAFT_194472 [Branchiostoma floridae]
gi|229273658|gb|EEN44507.1| hypothetical protein BRAFLDRAFT_194472 [Branchiostoma floridae]
Length = 457
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +F ++ ++ L +H V+ + K F+C C Y+T + NH H
Sbjct: 84 PYKCDQC-DFAAAQISHLKKH-----VRVKHNGEK-PFVCNECGYWTADKTTLTNHMRTH 136
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G++ +KC C Y A +K L H++
Sbjct: 137 TGERPYKCDQCDYSASEKGHLSSHMR 162
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y T S + H H G+K +KC C + A Q L+ HV+ KH+
Sbjct: 57 FLCDECGYRTRESSALSTHKRTHTGEKPYKCDQCDFAAAQISHLKKHVRVKHN 109
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 15/92 (16%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYK----FICVACDYFT 96
+M P C C +F+++ +LL +H VR VK+K F+C C+Y+T
Sbjct: 160 HMRTHTGEKPYKCDQC-DFSAAQSSLLTKH-------VR---VKHKGEKPFMCNECEYWT 208
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKE 128
N H H G++ +KC C Y A +K+
Sbjct: 209 DNRTNFLTHLRKHTGERPYKCDQCDYAASEKD 240
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C T+S +L R + ++C C Y S ++ +H H
Sbjct: 342 PYLCEECGFRTASQASLTK--------HKRKHTGEKPYLCNECGYRARESSSLSSHMRTH 393
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
G+K +KC C + + Q L+ HV+ KH
Sbjct: 394 TGEKPYKCDQCDFSSAQSTSLKTHVRVKH 422
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 46 NSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
N P C C + ++D L H +R + + C CDY ++ +H
Sbjct: 109 NGEKPFVCNEC-GYWTADKTTLTNH-------MRTHTGERPYKCDQCDYSASEKGHLSSH 160
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
H G+K +KC C + A Q L HV+ KH
Sbjct: 161 MRTHTGEKPYKCDQCDFSAAQSSLLTKHVRVKH 193
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 52 SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
+CK C+ F ++D L EH R + ++C C Y T S + H H G
Sbjct: 2 TCKLCE-FKTADKETLSEHK-------RTHAEEKPYLCGECGYRTAHSSSFTRHKRKHTG 53
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVK 135
+K F C C Y + L H +
Sbjct: 54 EKPFLCDECGYRTRESSALSTHKR 77
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 31/78 (39%)
Query: 62 SDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCS 121
D H + R K ++C C Y S + H H G+K +KC C
Sbjct: 261 GDCGYRTAHRSSFTRHQRKHTGKKPYLCDECGYRARESSYLSIHKRTHTGEKPYKCDQCD 320
Query: 122 YGAYQKEKLQFHVKNKHS 139
Y A Q L+ HV+ H+
Sbjct: 321 YSAAQLPCLKNHVRRTHT 338
>gi|260823106|ref|XP_002604024.1| hypothetical protein BRAFLDRAFT_71687 [Branchiostoma floridae]
gi|229289349|gb|EEN60035.1| hypothetical protein BRAFLDRAFT_71687 [Branchiostoma floridae]
Length = 677
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F+C C Y T + H H G K +KC C Y A QK L FH++
Sbjct: 581 FMCGECGYSTARKSTLYRHMRTHSGKKPYKCDQCDYSAAQKSALDFHLR 629
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C HC +F+S+ + L +H N P F+CV C Y
Sbjct: 431 HMRTHTGEKPYKCDHC-DFSSARKDDLKKHVAN---HTGDKP----FLCVECGYRAYTRS 482
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ H H G+K +KC C Y A K L H++
Sbjct: 483 ILSAHMRKHSGEKPYKCDQCDYSAADKSTLVKHIR 517
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C HC +F+S+ + L +H N +P F+CV C Y
Sbjct: 56 HMRTHTGEKPYKCDHC-DFSSARKDDLKKHVAN-HTGNKP------FMCVECGYRAYSRS 107
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ H H G+K +KC C Y A K L H++
Sbjct: 108 ILSAHMRTHSGEKPYKCDQCDYSAADKSTLVKHIR 142
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CD+ + +++ H H GDK F C C Y AY + L H++ KHS
Sbjct: 441 YKCDHCDFSSARKDDLKKHVANHTGDKPFLCVECGYRAYTRSILSAHMR-KHS 492
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+++C C Y T + H H G+K +KC C + + +K+ L+ HV N
Sbjct: 412 RYVCDVCGYKTPYRPTLSQHMRTHTGEKPYKCDHCDFSSARKDDLKKHVAN 462
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+++C C Y T + H H G+K +KC C + + +K+ L+ HV N
Sbjct: 37 RYVCDVCGYKTPYRPTLFQHMRTHTGEKPYKCDHCDFSSARKDDLKKHVAN 87
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C F ++ + L H +R + ++ C CDY ++ H H
Sbjct: 524 PYMCGEC-GFRTAGRSTLSRH-------MRTHTGERRYKCDQCDYCAARKDDLDKHLATH 575
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K F C C Y +K L H++ HS K
Sbjct: 576 TGEKPFMCGECGYSTARKSTLYRHMRT-HSGK 606
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CD+ + +++ H H G+K F C C Y AY + L H++
Sbjct: 66 YKCDHCDFSSARKDDLKKHVANHTGNKPFMCVECGYRAYSRSILSAHMRT 115
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T + H H G+K F C C Y A QK L H+
Sbjct: 206 FMCGECGYRTARKSTLYKHMRTHPGEKPFTCDRCDYSAAQKCTLDRHL 253
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+R P + F C CDY + H + H G+K + C C + +K L H++
Sbjct: 225 MRTHPGEKPFTCDRCDYSAAQKCTLDRHLMTHTGEKPYMCGECGHRTAEKSDLARHMRT 283
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C F ++ + L H +R + ++ C CDY ++ H H
Sbjct: 149 PYMCGEC-GFRTAGRSTLSRH-------MRTHTGERRYKCDQCDYCAARKYDLDKHLATH 200
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K F C C Y +K L H++
Sbjct: 201 TGEKPFMCGECGYRTARKSTLYKHMRT 227
>gi|260793940|ref|XP_002591968.1| hypothetical protein BRAFLDRAFT_220962 [Branchiostoma floridae]
gi|229277181|gb|EEN47979.1| hypothetical protein BRAFLDRAFT_220962 [Branchiostoma floridae]
Length = 284
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C HC + NL +++ + P ++C C Y T +
Sbjct: 27 HMRTHTGEKPYKCDHCDYSAAQKYNL----NQHLAIHIGEKP----YMCGECGYRTAKTS 78
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ NH H G+K +KC C Y A QK L H+
Sbjct: 79 HLANHMRTHTGEKPYKCNHCDYSAIQKSNLDQHL 112
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + +++ + L EH +R + + C CD+ N+ H IH
Sbjct: 120 PYMCGKC-GYRTANKSHLAEH-------MRTHTGEKPYKCDQCDFSAAHKSNLDQHLAIH 171
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
GDK + C C Y +K +L H++
Sbjct: 172 TGDKPYMCGECGYRTTRKSQLSDHMR 197
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + +H H G+K +KC C Y A K L H+
Sbjct: 177 YMCGECGYRTTRKSQLSDHMRTHTGEKPYKCDQCDYSAATKSTLDSHL 224
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y + H H G+K +KC C Y A QK L H+
Sbjct: 9 YICGECGYRAAYKSYLSRHMRTHTGEKPYKCDHCDYSAAQKYNLNQHL 56
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + +H H G+K + C C Y A QK L H++
Sbjct: 205 YKCDQCDYSAATKSTLDSHLAKHRGEKPYMCGECGYRATQKSHLSKHMR 253
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y ++ H H G+K +KC C Y A K L H K
Sbjct: 233 YMCGECGYRATQKSHLSKHMRTHTGEKPYKCDQCDYSATDKSALNKHCK 281
>gi|47230373|emb|CAF99566.1| unnamed protein product [Tetraodon nigroviridis]
Length = 814
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 358 FKCSMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 412
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 357 PFKCSMC-DYSSVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 408
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 409 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 441
>gi|344241580|gb|EGV97683.1| Zinc finger protein 335 [Cricetulus griseus]
Length = 1171
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C++ + + NH L H+ DK F+C C Y ++++ L HV KH+
Sbjct: 447 RFKCEFCEFVCDDKKALLNHQLSHVSDKPFRCSFCPYRTFREDFLLSHVAVKHT 500
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
C C + + +++R H L H +K F C LC + L+FH++ HS+
Sbjct: 910 CNQCSFASKNKKDLRRHMLTHTNEKPFSCHLCGQRFNRNGHLKFHIQRLHSS 961
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI-HLG 111
C+ C+ F D L+ H + V P F C C Y T + +H + H G
Sbjct: 450 CEFCE-FVCDDKKALLNHQLS---HVSDKP----FRCSFCPYRTFREDFLLSHVAVKHTG 501
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
K F C C + K+ L+ HV+ +H+ ++
Sbjct: 502 AKPFACEYCHFSTRHKKNLRLHVRCRHANSFEE 534
>gi|260823270|ref|XP_002604106.1| hypothetical protein BRAFLDRAFT_71605 [Branchiostoma floridae]
gi|229289431|gb|EEN60117.1| hypothetical protein BRAFLDRAFT_71605 [Branchiostoma floridae]
Length = 929
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T+ ++ H H G+K +KC LC Y A K L++HV
Sbjct: 620 YKCGDCGYRTVTKFDLTKHRRTHTGEKPYKCDLCDYSAANKSSLRYHV 667
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F+C C Y T N+ H H G+KQ+KC C Y + K L H+ KH+ K
Sbjct: 158 FVCGKCGYRTTQMSNLSRHMRTHTGEKQYKCDQCDYSSANKSTLDRHL-AKHTEKT 212
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T+ +++ H IH G+K +KC C Y A + L+ H KH+
Sbjct: 732 YMCGECGHRTVTKYDLQKHIRIHTGEKPYKCDQCDYSATESNHLKTHKLAKHT 784
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y T S ++ H H G+K +KC C Y A K L H+
Sbjct: 102 YICGECGYMTAKSSHLTQHMKSHTGEKPYKCDQCDYSAAHKATLDRHL 149
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C + T N+ H H G+K +KC C Y A K +L H+
Sbjct: 676 YICGECGFRTAKKYNLTKHMRTHTGEKPYKCDQCDYSAANKSRLDHHL 723
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +F ++ + L+EH K ++C C Y T+
Sbjct: 358 HMRIHTGEKPYKCDQC-DFAAARKSALVEHQAK-------HTGKKPYMCEECGYRTVHKS 409
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K FKC C Y A +K L H+
Sbjct: 410 YLTVHKKTHTGEKPFKCDQCDYSAVRKCHLDIHL 443
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
FIC C + T + N+ H L H DK +KC C Y A K L H K KH+
Sbjct: 452 FICGECGFKTAVMYNLSRHMLSHSDDKPYKCDQCDYSAVFKTTLNNH-KAKHT 503
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + ++ H H G+K +KC C Y A QK L H+
Sbjct: 46 YMCGECGYRAVKRADLYKHMRKHSGEKPYKCDQCDYSAAQKSTLDQHL 93
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 11/70 (15%)
Query: 67 LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQ 126
++ HS++ P + C CDY + + NH H GDK + C C Y Q
Sbjct: 471 MLSHSDDKP-----------YKCDQCDYSAVFKTTLNNHKAKHTGDKPYMCKECGYKTTQ 519
Query: 127 KEKLQFHVKN 136
+ L H++
Sbjct: 520 QYYLSRHMRT 529
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G+K +KC C Y A K LQ H+
Sbjct: 508 YMCKECGYKTTQQYYLSRHMRTHTGEKPYKCDQCDYSAATKSTLQSHL 555
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L H R P K C C Y T
Sbjct: 526 HMRTHTGEKPYKCDQC-DYSAATKSTLQSH---LATHTREKPYK----CGECGYRTAFKS 577
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K +KC C Y A K + HV
Sbjct: 578 TLTRHMRTHTGEKPYKCDQCDYAAPTKTSFKKHV 611
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C Y + H IH G+K FKC C Y A +K +L +H+
Sbjct: 284 LVCGEWGYKAPYKSALAMHMRIHTGEKPFKCDRCDYSAARKSQLDYHI 331
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++++++ N L H +P F+C C + + + H H
Sbjct: 759 PYKCDQC-DYSATESNHLKTHKLAKHTGEKP------FLCGECGFRSTQRTQLTIHMRTH 811
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y A + L H KHS
Sbjct: 812 TGEKPYKCDQCDYSAASRGNLSKHNLVKHS 841
>gi|260822957|ref|XP_002602284.1| hypothetical protein BRAFLDRAFT_216665 [Branchiostoma floridae]
gi|229287591|gb|EEN58296.1| hypothetical protein BRAFLDRAFT_216665 [Branchiostoma floridae]
Length = 492
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+++ S P C C T NL + +P ++C C Y T
Sbjct: 311 HLAIHTSEKPYMCGECGFRTRQSSNLSRHMKSHTHSGEKP------YMCGECGYRTARKS 364
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H G+K +KC C Y A QK L H+ KHS
Sbjct: 365 DLSRHMRTHSGEKPYKCDQCDYSAAQKCDLVRHLSTKHS 403
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C HC + +L L +H+ P +IC C Y + + H
Sbjct: 40 PYKCNHCDYSAARKSSLDLHLTKHTGEKP-----------YICGECGYRAGLKSCLTKHM 88
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
IH G+K +KC C Y A QK L FH+
Sbjct: 89 KIHSGEKPYKCDQCDYSAVQKTSLDFHL 116
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M PQ HC + NL L +H+ + P ++C C Y T
Sbjct: 227 HMRIHTGEKPQQVAHCDCSAARKFNLDLHLTKHTGDKP-----------YMCGECGYRTA 275
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC C Y +K L H+
Sbjct: 276 RKSDLSGHVSTHTGEKSYKCDQCDYSTARKHNLGIHL 312
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T ++ H H G+K +KC C Y A K L HVK
Sbjct: 408 YMCGECGYRTARKSDLSRHMRTHSGEKPYKCDQCDYSAAHKSNLSNHVK 456
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y + + H H G+K FKC C Y A QK L HV++
Sbjct: 125 YMCGECGYRARLKSYLLKHMKTHSGEKPFKCDQCDYSALQKSDLSAHVRS 174
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+R + + C CDY ++ H IH G+K +KC C Y A +K L H+
Sbjct: 4 MRTHTAEKPYKCGQCDYAAKWKSDLSIHLRIHTGEKPYKCNHCDYSAARKSSLDLHL 60
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY N+ NH IH G+K + C C Y K L H++
Sbjct: 436 YKCDQCDYSAAHKSNLSNHVKIHTGEKPYMCGECGYRTGHKSDLFRHMRT 485
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
VR + + C CDY + H L H G+K + C C Y +K L H++
Sbjct: 172 VRSHSGERPYKCDQCDYSAATKSTLAQHVLKHTGEKPYMCGECGYRTARKSHLSRHMR 229
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CDY + ++ H H G++ +KC C Y A K L HV
Sbjct: 153 FKCDQCDYSALQKSDLSAHVRSHSGERPYKCDQCDYSAATKSTLAQHV 200
>gi|260815010|ref|XP_002602206.1| hypothetical protein BRAFLDRAFT_76895 [Branchiostoma floridae]
gi|229287513|gb|EEN58218.1| hypothetical protein BRAFLDRAFT_76895 [Branchiostoma floridae]
Length = 324
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T N+ H IH G++ +KC C Y A +K L+ H KHS
Sbjct: 111 YMCRECGYRTAKKCNLSQHIRIHTGERPYKCDQCEYSATKKANLKLHRLYKHS 163
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC +++++D + L +H +R + ++C C + T + HT H
Sbjct: 167 PYKCDHC-DYSTADKSTLDKH-------LRKHTGEKPYMCGECGFRTTRKSVLSVHTRTH 218
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C + A K L H+
Sbjct: 219 TGEKPYKCDRCDFSAAAKGNLDQHL 243
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C ++ NL L +H+ P ++C C Y + H
Sbjct: 223 PYKCDRCDFSAAAKGNLDQHLAKHTGEKP-----------YMCGECGYRATQKSTLSVHM 271
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
H G K + C C+Y A +K L H+ +H+ + K
Sbjct: 272 RTHTGVKPYNCQQCNYSAARKSHLTLHITRRHAKEAK 308
>gi|260791400|ref|XP_002590717.1| hypothetical protein BRAFLDRAFT_89523 [Branchiostoma floridae]
gi|229275913|gb|EEN46728.1| hypothetical protein BRAFLDRAFT_89523 [Branchiostoma floridae]
Length = 396
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY N++ H H G+K +KC +C Y A Q L++H+
Sbjct: 313 YKCEVCDYSAAHKSNLKRHMATHTGEKPYKCDVCDYSAAQVSHLRYHM 360
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M S P SC+ C +F+S+ N L +H + + + C CDY T
Sbjct: 94 HMRSHTSEKPYSCEMC-DFSSAHKNSLRKH-------MATHTSEKPYNCELCDYSTAHMS 145
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+++ H + H G+K +KC +C Y A L+ H S K
Sbjct: 146 SLKVHMVTHTGEKPYKCEMCDYSAANSSNLKVHSATHTSEK 186
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHT-LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+IC C Y T Q++ +H H G++ F+C +C Y A +K L+ H+ KHS
Sbjct: 18 YICGHCGYSTANKQHLVHHVRATHGGERPFQCAVCDYSAARKITLERHILAKHS 71
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +++++ V++L H + + + C CDY T ++ H + H
Sbjct: 228 PYKCEMC-DYSAAHVSILKRH-------MATHTGEKPYKCEVCDYSTARMSYLKRHMVTH 279
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC +CSY A L+ H+
Sbjct: 280 TGEKPYKCGICSYSAAHVSILKRHM 304
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY S N++ H+ H +K +KC +C Y L+ H+
Sbjct: 160 YKCEMCDYSAANSSNLKVHSATHTSEKPYKCEICDYSTTHMSNLKVHI 207
>gi|260823126|ref|XP_002604034.1| hypothetical protein BRAFLDRAFT_71676 [Branchiostoma floridae]
gi|229289359|gb|EEN60045.1| hypothetical protein BRAFLDRAFT_71676 [Branchiostoma floridae]
Length = 1271
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+IC C Y T ++ H H G K +KC C Y A +K +L+ HV +T K
Sbjct: 906 YICGECGYRTARKSDLSQHMRTHTGQKPYKCDQCDYSAARKSQLKRHVAKHTATGEK 962
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F+C C Y T N+ H H G+K +KC C Y A K L H++
Sbjct: 1020 FMCGECGYRTTQRSNLSRHMRTHTGEKPYKCNQCDYSAANKSALDHHIE 1068
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+ C CDY + N+ +H H G+K FKC C Y A K KL+ H
Sbjct: 262 YKCDQCDYAAAVKHNLIDHQKTHSGEKPFKCDQCDYSAVDKSKLKQH 308
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY + ++ H + H G+K + C C YG + L H++
Sbjct: 290 FKCDQCDYSAVDKSKLKQHQVKHTGEKPYMCGECGYGTAYRSHLSRHMR 338
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++D + L H +R + ++C CDY Q M +H H
Sbjct: 1187 PYMCGEC-GYRTADRSHLSRH-------MRTHTGERPYLCDQCDYSAAHKQYMIDHLTKH 1238
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K + C C + A Q+ L H+K
Sbjct: 1239 SGEKPYMCGECGFRAAQRSTLYRHMKR 1265
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y ++ H H G+K +KC C Y A +K L H++
Sbjct: 509 YMCGECGYRAAYRSHLSRHMRTHTGEKPYKCDQCDYSAARKSSLDEHLQ 557
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T ++ H H G+K +KC C Y A +K L H
Sbjct: 318 YMCGECGYGTAYRSHLSRHMRTHTGEKPYKCDQCDYSAAEKHHLIDH 364
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
++C C Y I N+ H H G+K +KC C Y A
Sbjct: 452 YMCGECGYRAIYRSNLSRHMRTHTGEKPYKCDQCDYSA 489
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
++C C Y ++ H H G+K +KC CSY A +K + H K + S+
Sbjct: 764 YMCGECGYRANYKVSLSQHMRTHTGEKPYKCDQCSYSAVKKSAMSKHNKMEDSS 817
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C + ++ H H G+K +KC C Y A +K L H++
Sbjct: 595 YMCGVCGFRAAYRSHLSRHMRTHTGEKPYKCDQCDYSAARKSSLDEHLQ 643
>gi|260835632|ref|XP_002612812.1| hypothetical protein BRAFLDRAFT_225793 [Branchiostoma floridae]
gi|229298192|gb|EEN68821.1| hypothetical protein BRAFLDRAFT_225793 [Branchiostoma floridae]
Length = 259
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+HC +++++ + L +H +R + F+C C + T + H H G+
Sbjct: 119 CRHC-DYSAAKKSTLDKH-------LRKHTGETPFMCEQCGFRTARQSTLSQHMRTHSGE 170
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHS 139
K FKC LC Y A +K L H ++KH+
Sbjct: 171 KPFKCDLCDYSAARKSTLVAH-RSKHT 196
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 87 FICVACDYFTIISQNMRNH-TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + ++ NH T+ H G+K ++C C YG QK +L H++
Sbjct: 60 YKCDQCDYSSARKSSLDNHLTVHHTGEKPYRCVECGYGTNQKARLTEHMRT 110
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ CV C Y T + H H G+K +KC C Y A +K L H++
Sbjct: 89 YRCVECGYGTNQKARLTEHMRTHTGEKSYKCRHCDYSAAKKSTLDKHLRK 138
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+C CD+ T + ++ H H G++ +KC C Y A QK +L H + KH+
Sbjct: 201 LMCSECDFRTARTSDLCRHMRTHTGERPYKCDQCDYSASQKRRLIEH-RTKHT 252
>gi|189054182|dbj|BAG36702.1| unnamed protein product [Homo sapiens]
Length = 663
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFRCCQCSYASRDTYKLKRHMR 390
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFRCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|338723170|ref|XP_001497900.3| PREDICTED: transcriptional repressor CTCF isoform 2 [Equus
caballus]
Length = 399
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 23 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 77
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 22 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 73
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 74 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 106
>gi|449686732|ref|XP_004211243.1| PREDICTED: zinc finger protein 271-like, partial [Hydra
magnipapillata]
Length = 223
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY I N+ H IH G+K FKC C Y QK L H+K
Sbjct: 112 FKCTYCDYECIQKYNLVRHVKIHTGEKPFKCTYCDYECTQKTHLTRHLK 160
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY + H + H G+K FKC C Y QK L HVK
Sbjct: 168 FKCTYCDYKCTQKSTLPRHVMTHTGEKPFKCAYCDYKCAQKSDLTRHVK 216
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CDY ++ H H G+K FKC C Y QK L HV
Sbjct: 140 FKCTYCDYECTQKTHLTRHLKFHSGEKPFKCTYCDYKCTQKSTLPRHV 187
>gi|260823008|ref|XP_002603975.1| hypothetical protein BRAFLDRAFT_71737 [Branchiostoma floridae]
gi|229289300|gb|EEN59986.1| hypothetical protein BRAFLDRAFT_71737 [Branchiostoma floridae]
Length = 1925
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 60 TSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL 119
TS+ L+ E N V + ++C C Y ++ ++ H IH G++ +KC
Sbjct: 1506 TSTSQVLVQESRGNMERHVVKHTGEKPYMCGECGYRSVQKSDLTKHMRIHTGERPYKCDQ 1565
Query: 120 CSYGAYQKEKLQFHVKNKHSTK 141
C Y A QK +L NKH TK
Sbjct: 1566 CDYSAAQKSRL-----NKHLTK 1582
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P +C HC +F++S + L H +P ++C C Y T
Sbjct: 1123 HMRTHTGEKPYNCDHC-DFSTSHKSNLDRHIAAKHTGEKP------YMCGECGYRTAYRS 1175
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H H G+K +KC C Y A ++ L+ H K KH+ +
Sbjct: 1176 DLSRHMRTHSGEKPYKCDQCDYSAARRSALEEH-KAKHTGE 1215
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T+ + H IH G+K +KC C Y A +K L H++
Sbjct: 1646 YMCGECGYRTVERSTLSRHRRIHTGEKPYKCDQCDYSATEKSTLVKHIR 1694
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 14/98 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + +NL L +HS P + C CDY+
Sbjct: 1720 HMRTHTGEKPYKCDQCDYSAARKINLVQHLTKHSGEKP-----------YRCDQCDYYAT 1768
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ +H H G+K F C C Y A QK L H++
Sbjct: 1769 QKYRLVDHLRTHNGEKPFMCGECGYRASQKSHLSKHMR 1806
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T ++ HT H G+K KC C Y A K L+ HV KHS +
Sbjct: 595 YMCGECGYRTAKKSHLSRHTRTHTGEKPCKCDQCDYSAAHKSSLEQHVA-KHSGE 648
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC CSY A QK L H+
Sbjct: 196 YMCGECGYRTTQKYDLSRHMRTHTGEKPYKCDQCSYSAAQKYYLDKHL 243
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC CSY A QK L H+
Sbjct: 252 YMCGECGYRTTQKYDLSRHMRTHTGEKPYKCDQCSYSAAQKYYLDKHL 299
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++++++ + L++H +R +IC C Y ++ H H
Sbjct: 1673 PYKCDQC-DYSATEKSTLVKH-------IRKHTGDKPYICGECGYRVTRKNDLSRHMRTH 1724
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K +KC C Y A +K L H+ KHS +
Sbjct: 1725 TGEKPYKCDQCDYSAARKINLVQHL-TKHSGE 1755
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T ++ H H G+K + C C Y A QK L H++ KHS +
Sbjct: 140 YMCGDCGYRTAQKSDLSRHMRTHTGEKPYHCDQCDYSAAQKPHLDRHLR-KHSGE 193
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T+ ++ H IH G++ +KC C + A QK + H
Sbjct: 1047 FMCGECGYRTVQMSDLTKHMRIHTGERPYKCDQCDFSAAQKLHMDRHT 1094
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFT---- 96
+M P C C +++++D L H R + ++C C + T
Sbjct: 753 HMRTHTGEKPYKCDQC-DYSAADRTTLANHQ-------RKHTGEKPYMCGECGFRTNRKF 804
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
I+S +MR HT G+K +KC C Y A QK L+ H+ +KH+ +
Sbjct: 805 ILSVHMRKHT----GEKPYKCDQCDYSAAQKSNLEQHL-SKHTGE 844
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C T ++ H H G+K +KC C Y A +K L H KHS +
Sbjct: 1589 YMCGECGVRTPYKASLSRHMRTHTGEKPYKCDQCDYSAARKSTLDNHTIAKHSGE 1643
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M + P C C +++++ + L EH + F+C C Y
Sbjct: 1180 HMRTHSGEKPYKCDQC-DYSAARRSALEEHKAK-------HTGEKPFMCGECGYRAARKS 1231
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K ++C C Y A K L H+
Sbjct: 1232 HLSQHMRSHTGEKPYRCDHCDYSAADKSALDHHI 1265
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +F++ D L +H E P K C C Y T
Sbjct: 1804 HMRTHTGEKPYKCDQC-DFSAIDKFKLKQHQEK---HAGDKPYK----CGECAYMTAYRS 1855
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H H G+K +KC C Y A +K L H + +HS +
Sbjct: 1856 HLSRHMRYHTGEKPYKCDQCDYSAAEKHHLIDH-QTRHSGE 1895
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 23/114 (20%)
Query: 34 GHCQTCPNMSFLNSV--------IPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDP 82
G C N F+ SV P C C + NL L +H+ P
Sbjct: 794 GECGFRTNRKFILSVHMRKHTGEKPYKCDQCDYSAAQKSNLEQHLSKHTGEKP------- 846
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLG-DKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T ++ H H G K +KC C Y A QK L H K
Sbjct: 847 ----YMCGECGYRTAYRSDLSKHMRTHTGLKKNYKCDQCDYSASQKSTLDRHGK 896
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C HC +++++D + L H + + ++C C + T
Sbjct: 1236 HMRSHTGEKPYRCDHC-DYSAADKSALDHH-------IVIHTGEKPYMCGECGFRTTQKS 1287
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++ H H G+K ++C C Y A K L H +
Sbjct: 1288 HLSRHMRTHTGEKPYRCDQCDYSAADKYTLDQHQR 1322
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++D + L H +R + + C CDY + + +H H
Sbjct: 343 PYMCGEC-GYRTADRSALSRH-------MRTHTGERRHKCDQCDYSAALKHYLIDHQRRH 394
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G++ + C C Y A +K L H++
Sbjct: 395 SGERPYMCGECGYRAAKKSTLSQHMR 420
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T N+ H H G+K KC C Y A +K L H++
Sbjct: 84 YMCGVCGYRTERKSNLSLHMRTHTGEKPNKCDQCDYSAARKSSLDKHLQ 132
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C CDY N+ H H G+K ++C C Y A QK +L H++ + K
Sbjct: 1730 YKCDQCDYSAARKINLVQHLTKHSGEKPYRCDQCDYYATQKYRLVDHLRTHNGEK 1784
>gi|260823014|ref|XP_002603978.1| hypothetical protein BRAFLDRAFT_71734 [Branchiostoma floridae]
gi|229289303|gb|EEN59989.1| hypothetical protein BRAFLDRAFT_71734 [Branchiostoma floridae]
Length = 572
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
+L E N V + V+ +IC C Y T ++ H IH G K KC C Y A
Sbjct: 128 HLGKESKGNMGRYVVENTVEKPYICGECGYRTARKSDLSQHMRIHTGKKPHKCDQCEYSA 187
Query: 125 YQKEKLQFHVKNKHSTKVK 143
+K L+ HV +T K
Sbjct: 188 ARKSHLKRHVAKHTATGEK 206
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C+ + +L +++ +P F+C C Y
Sbjct: 168 HMRIHTGKKPHKCDQCEYSAARKSHLKRHVAKHTATGEKP------FMCGECGYRATQKS 221
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H GDK +KC C Y A QK L H+
Sbjct: 222 DLSKHMRTHTGDKPYKCDQCDYSAAQKGHLDQHL 255
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 47 SVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
V P C C ++++++ + L H R + ++C C Y T ++ H
Sbjct: 344 GVKPYKCDQC-DYSAAERSKLGRHK-------RKHTNEKPYMCGECGYRTAQKSHLSEHM 395
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G++ +KC C Y A +K KL H++
Sbjct: 396 RTHTGERPYKCDQCGYSAARKYKLAEHLR 424
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++ L EH +R + FIC C Y
Sbjct: 394 HMRTHTGERPYKCDQC-GYSAARKYKLAEH-------LRIHTGEKPFICEECGYRAARKS 445
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H G+K +KC C Y A QK L H + +HS
Sbjct: 446 DLSRHMRTHTGEKPYKCDQCDYSASQKHHLIDH-QTRHS 483
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++S + L++H R K F+C C Y
Sbjct: 450 HMRTHTGEKPYKCDQC-DYSASQKHHLIDH------QTRHSGEK-PFMCGECGYRAAQRS 501
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ H H G+K+ KC C + A QK L H++
Sbjct: 502 ALSQHMRTHTGEKRNKCDQCDFSAIQKYDLVKHIR 536
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
++++++ + L++H + RP ++C C Y + H H G K +KC
Sbjct: 298 DYSAAEKHSLIDH-QTRHTGERP------YMCGECGYRAAQRSTLFQHRRTHTGVKPYKC 350
Query: 118 CLCSYGAYQKEKLQFHVKNKHSTK 141
C Y A ++ KL H K KH+ +
Sbjct: 351 DQCDYSAAERSKLGRH-KRKHTNE 373
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
++C C + T ++ H H G++++KC C Y A +K L
Sbjct: 264 YMCGECGHRTAQKSDLTRHMRTHTGERRYKCDQCDYSAAEKHSL 307
>gi|259027992|gb|ABH10101.2| BORIS transcription factor transcript variant C7 [Homo sapiens]
gi|259027994|gb|ABH10102.2| BORIS transcription factor transcript variant C9 [Homo sapiens]
Length = 426
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ HS K
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRT-HSGK 395
>gi|260813394|ref|XP_002601403.1| hypothetical protein BRAFLDRAFT_61875 [Branchiostoma floridae]
gi|229286698|gb|EEN57415.1| hypothetical protein BRAFLDRAFT_61875 [Branchiostoma floridae]
Length = 370
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y I ++ H H G+K +KC C Y A QK L H + KHS
Sbjct: 318 YMCGICGYRAAIKSHLIQHMRTHTGEKPYKCDQCEYSAAQKPSLDRHYQAKHS 370
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C+Y A QK L+ H+
Sbjct: 151 YLCEHCGYKTTKHSHLSRHLRTHTGEKPYKCDQCNYSAAQKTALELHM 198
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G+K +KC C Y A QK L+ H+
Sbjct: 262 YMCGECGYRTARKAVLSRHVRTHTGEKPYKCDQCDYSAAQKTALELHM 309
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C Y T N+ H H G+K +KC C Y A K L H++ KH+
Sbjct: 10 YRCGECRYRTAKRSNLLVHMRTHTGEKPYKCDQCDYSAAYKTALDKHLRAKHT 62
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 60 TSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL 119
T+ D +L +H+ P ++C C Y T + H H G+K + C
Sbjct: 51 TALDKHLRAKHTGEKP-----------YMCGECGYKTAQKSTLTRHMRTHTGEKPYMCDE 99
Query: 120 CSYGAYQKEKLQFHVKN 136
C Y QK L H+K
Sbjct: 100 CGYRTAQKSHLSEHMKT 116
>gi|73957277|ref|XP_864453.1| PREDICTED: transcriptional repressor CTCF isoform 3 [Canis lupus
familiaris]
Length = 399
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 23 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 77
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 22 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 73
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 74 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 106
>gi|260781015|ref|XP_002585624.1| hypothetical protein BRAFLDRAFT_111666 [Branchiostoma floridae]
gi|229270642|gb|EEN41635.1| hypothetical protein BRAFLDRAFT_111666 [Branchiostoma floridae]
Length = 195
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K FKC C Y A QK LQ HV
Sbjct: 56 YMCGECGYRTARKSDLSRHMRTHTGEKPFKCDQCDYSAAQKCDLQKHV 103
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H G+K +KC C Y A QK L HV
Sbjct: 112 YMCGECGYRAARKSHLSQHMRTHTGEKPYKCDQCDYSATQKSTLDKHV 159
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY +++ H H GDK + C C Y A +K L H++
Sbjct: 84 FKCDQCDYSAAQKCDLQKHVTKHTGDKPYMCGECGYRAARKSHLSQHMRT 133
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + H H GDK + C C Y +K+ L H++
Sbjct: 140 YKCDQCDYSATQKSTLDKHVAKHTGDKPYMCGECGYRTARKDSLSQHMRT 189
>gi|260832824|ref|XP_002611357.1| hypothetical protein BRAFLDRAFT_210867 [Branchiostoma floridae]
gi|229296728|gb|EEN67367.1| hypothetical protein BRAFLDRAFT_210867 [Branchiostoma floridae]
Length = 85
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +T++ L + +R + + C CD+ T ++ N+ H L H
Sbjct: 3 PYMCEKCGYWTANKGALSLH--------MRTHTGEKPYKCDLCDFSTAVTSNLHRHRLKH 54
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFH 133
G K +KC C Y A +K L+ H
Sbjct: 55 TGGKPYKCDQCDYAATRKFDLEIH 78
>gi|47229119|emb|CAG03871.1| unnamed protein product [Tetraodon nigroviridis]
Length = 581
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CD I+ +++ H IH G+K +KC C Y K L+ HV+ KHS++
Sbjct: 232 FQCQQCDAKFKINSDLKRHVRIHSGEKPYKCDFCDYRCAMKGNLKSHVQIKHSSE 286
>gi|260787222|ref|XP_002588653.1| hypothetical protein BRAFLDRAFT_240691 [Branchiostoma floridae]
gi|229273820|gb|EEN44664.1| hypothetical protein BRAFLDRAFT_240691 [Branchiostoma floridae]
Length = 313
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F C CDY T ++ HT H G+K +KC C Y A + L+ H+
Sbjct: 5 RFACTECDYRTAFKYDLSRHTRKHSGEKPYKCDQCDYSAARNSSLKRHL 53
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C + T + ++ H H G K +KC LC Y + QK L H+
Sbjct: 230 YICGECGFRTAVRSHLTVHMRRHTGVKPYKCGLCDYSSTQKGNLDLHM 277
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T ++ + H H G K +KC C Y A QK L H+
Sbjct: 62 YTCRECGYRTAVNSELTAHMRTHTGVKPYKCDRCDYSAAQKGSLDIHM 109
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+MS P C C S NL + +H+ P ++C C Y
Sbjct: 136 HMSRHTGEKPYKCDQCDYSASKKGNLDQHMTKHTGEKP-----------YMCDECGYMAA 184
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G K +KC +C Y A +K L HV
Sbjct: 185 SRSRLTVHMRTHTGLKPYKCDVCDYSAAKKCNLDLHV 221
>gi|350584989|ref|XP_003355835.2| PREDICTED: transcriptional repressor CTCF-like [Sus scrofa]
gi|426242523|ref|XP_004015122.1| PREDICTED: transcriptional repressor CTCF isoform 3 [Ovis aries]
Length = 399
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 23 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 77
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 22 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 73
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 74 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 106
>gi|348534537|ref|XP_003454758.1| PREDICTED: zinc finger protein 513-like [Oreochromis niloticus]
Length = 532
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC +TSS ++ L H +R + + C +C Y N+R H IH
Sbjct: 392 PHRCPHCP-YTSSHLDNLKRH-------LRVHTGEKPYQCPSCSYACGNLANLRRHERIH 443
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G K F C +C Y Q L+ H+
Sbjct: 444 SGAKPFHCAICGYSCNQSMNLKRHM 468
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 72 ENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQ 131
+ C+ P P Y C C + + S +++ H IH G K + C +C Y + Q LQ
Sbjct: 151 DKASCVADPAPKLYS--CSLCTFTSRYSNHLKRHMRIHDGQKPYHCPVCPYASAQLVNLQ 208
Query: 132 FHVKNKHSTK 141
H + K
Sbjct: 209 RHARTHTGEK 218
>gi|300388142|ref|NP_001177951.1| transcriptional repressor CTCF isoform 2 [Homo sapiens]
gi|332846322|ref|XP_003315228.1| PREDICTED: transcriptional repressor CTCF [Pan troglodytes]
Length = 399
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CDY ++ ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 23 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 77
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++ S +V+ L H +R + F C C Y + + ++ H H
Sbjct: 22 PFKCSMC-DYASVEVSKLKRH-------IRSHTGERPFQCSLCSYASRDTYKLKRHMRTH 73
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH+ V
Sbjct: 74 SGEKPYECYICHARFTQSGTMKMHILQKHTENV 106
>gi|260832566|ref|XP_002611228.1| hypothetical protein BRAFLDRAFT_71189 [Branchiostoma floridae]
gi|229296599|gb|EEN67238.1| hypothetical protein BRAFLDRAFT_71189 [Branchiostoma floridae]
Length = 323
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
V +F C CDY + HT H G+K +KC C Y A QK L H+ + K+
Sbjct: 82 VDRRFECTECDYRAATRTQLVIHTRKHTGEKPYKCDQCDYSAAQKGNLDQHMTKHNGEKL 141
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CD+ N+ H H G+K +KC C Y A QK +L H+
Sbjct: 170 FKCDQCDFTASWKGNLDQHMAKHTGEKPYKCDQCDYSASQKCRLDQHM 217
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T S ++ H H+G+K +KC C Y K L H+
Sbjct: 226 YMCGECGYRTAASSSLTVHMRRHIGEKPYKCDQCDYSGATKSNLDQHM 273
>gi|308461820|ref|XP_003093198.1| hypothetical protein CRE_07023 [Caenorhabditis remanei]
gi|308250675|gb|EFO94627.1| hypothetical protein CRE_07023 [Caenorhabditis remanei]
Length = 376
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
F C C F S ++R H H +K + CC+C+Y A +++ L H+ +H T
Sbjct: 265 FKCEDCGRFFSRSDHLRTHRRTHTDEKPYHCCVCNYSARRRDVLTRHMSTRHQT 318
>gi|76155288|gb|AAX26548.2| SJCHGC07628 protein [Schistosoma japonicum]
Length = 190
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 42 MSFLNSVIPQSCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
M + V P +CK+C K F + +E E +P F C CD +
Sbjct: 44 MRLRSGVKPYACKYCEKKFV---LKQALEGHERTHTGEKP------FKCSYCDKTFSVGT 94
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N++ H +H G+K FKC +C G Q ++ H++
Sbjct: 95 NLKRHERVHTGEKPFKCDVCGRGFGQANNVKAHMQ 129
>gi|348521494|ref|XP_003448261.1| PREDICTED: zinc finger protein 335-like, partial [Oreochromis
niloticus]
Length = 1458
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 28/54 (51%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
KF C CDY + + NH L H D+ FKC C Y ++E L H+ KH+
Sbjct: 922 KFKCEFCDYTCDNKKLLLNHQLSHTNDRPFKCDYCKYSTSKEEFLVSHLAIKHT 975
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI-HLG 111
C+ C ++T + LL+ H + RP F C C Y T + + +H I H G
Sbjct: 925 CEFC-DYTCDNKKLLLNHQLS-HTNDRP------FKCDYCKYSTSKEEFLVSHLAIKHTG 976
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+K F C +C + ++ L+ HV+ +H+
Sbjct: 977 EKPFSCDMCHFMTKHRKNLRLHVQCRHA 1004
>gi|260787897|ref|XP_002588988.1| hypothetical protein BRAFLDRAFT_59991 [Branchiostoma floridae]
gi|229274160|gb|EEN44999.1| hypothetical protein BRAFLDRAFT_59991 [Branchiostoma floridae]
Length = 522
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
C +M V P C C +F+++ + L H V ++C C Y
Sbjct: 428 CTLSQHMRKHTGVKPYKCDQC-DFSAAQKSTLNNH-------VAMHTGDKPYMCGECGYR 479
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
T+ N+ H H GDK +KC C Y A +K L H K
Sbjct: 480 TVQKCNLSRHMRAHTGDKSYKCDQCDYSATKKSALDNHCK 519
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T++ + H H G+K +KC C Y A +K L H+
Sbjct: 247 YMCGECGYRTVLKSTIARHMRTHTGEKPYKCDQCDYSAAEKSHLDSHL 294
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + N++ H +H GD + C C Y QK L H++
Sbjct: 168 YKCDQCDYSAALKSNLKKHLAMHTGDMPYMCGECGYRTTQKCNLSLHMR 216
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T N+ H H G+K +KC C + A +K L H+ KH+
Sbjct: 303 YMCGECGYRTAQKSNLSTHMRTHTGEKPYKCDQCDFSARRKNHLDQHL-GKHT 354
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L +H+ + P ++C C + T
Sbjct: 46 HMRTHTGEKPYKCDQCDYSAAKKYNLDQHLAKHTGDKP-----------YMCGECGFRTT 94
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC C Y A K+ L H+
Sbjct: 95 RKSDLVEHMRTHTGEKPYKCDQCDYSAAHKKSLNQHL 131
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A +K L H+
Sbjct: 359 YMCGECGYRTTWKSDLATHMRTHTGEKPYKCDQCDYSATRKYHLDKHL 406
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ +H H GDK + C C Y QK L H++
Sbjct: 275 YKCDQCDYSAAEKSHLDSHLAKHTGDKPYMCGECGYRTAQKSNLSTHMR 323
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H IH GDK + C C Y QK L H++
Sbjct: 387 YKCDQCDYSATRKYHLDKHLAIHTGDKPYMCGECGYRTAQKCTLSQHMR 435
>gi|432118545|gb|ELK38127.1| Zinc finger protein ZFAT, partial [Myotis davidii]
Length = 753
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 89 CVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 393 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 445
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 48 VIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL 107
V P C C+ T S NL + + + +C C +++H L
Sbjct: 417 VKPFKCSLCEYATRSKSNLKAHMNRH--------STEKTHLCDMCGKKFKSKGTLKSHKL 468
Query: 108 IHLGD-KQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+H D KQFKC +C Y A Q+ +L H++ S K
Sbjct: 469 LHTADGKQFKCTVCDYTAAQRPQLLRHMEQHASFK 503
>gi|301619181|ref|XP_002938981.1| PREDICTED: zinc finger protein 827-like [Xenopus (Silurana)
tropicalis]
Length = 1286
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+ CK ++ + L M VR + + C C Y + + + H +H G+
Sbjct: 1093 CRICKTVKANQLELEMH--------VRGHRLGNHYKCDQCGYLSKTANKLIEHVRVHTGE 1144
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ F C CSY +K+ L H K KHS +
Sbjct: 1145 RPFHCDQCSYSCKRKDNLNLHKKLKHSPR 1173
>gi|260814490|ref|XP_002601948.1| hypothetical protein BRAFLDRAFT_86432 [Branchiostoma floridae]
gi|229287251|gb|EEN57960.1| hypothetical protein BRAFLDRAFT_86432 [Branchiostoma floridae]
Length = 847
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
K C C+Y T S + NH +H G++ +KC C Y A +K+ L+ H+
Sbjct: 572 KLACSLCEYSTADSGRLSNHMAVHTGERPYKCDKCDYSAVRKDHLKQHM 620
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++S+ + L H MV+ K + C CDY T + H + H
Sbjct: 461 PYKCDQC-DYSSAQKHYLKAH------MVKHGGEK-SYKCDQCDYATGWRNRLTTHMVKH 512
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFH 133
G+K F C +C + + K +LQ H
Sbjct: 513 TGEKTFVCEVCEFSSASKHRLQLH 536
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +F+++ L H E RP ++C C + T S N+ H IH
Sbjct: 768 PYRCDQC-DFSTAWKGCLTRHIEE-HTGERP------YLCGECGFRTTKS-NLHRHMKIH 818
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K ++C LC Y +KE L H+
Sbjct: 819 SGNKPYRCDLCEYCTNRKESLARHM 843
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F+C C++ + ++ H H G+K +KC C Y A +K L H K KH+ +
Sbjct: 518 FVCEVCEFSSASKHRLQLHKQTHTGEKPYKCDQCDYTASRKVYLARH-KTKHTGE 571
>gi|260808231|ref|XP_002598911.1| hypothetical protein BRAFLDRAFT_122442 [Branchiostoma floridae]
gi|229284186|gb|EEN54923.1| hypothetical protein BRAFLDRAFT_122442 [Branchiostoma floridae]
Length = 1222
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C Y T + ++ H IH G+K +KC C Y A K L+ H+ +H+
Sbjct: 1026 YKCGECGYRTAVKSDLSIHVRIHTGEKPYKCDQCDYSAANKSSLKNHLAARHT 1078
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y ++ H H G+K +KC C Y A QK L+FHV
Sbjct: 1167 YTCGECGYRAAKKSHLSQHMRTHTGEKPYKCDQCDYSAAQKAHLKFHV 1214
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T S N+ H H G+K +KC C Y A K L H+
Sbjct: 1083 YMCGECGYRTYQSSNLSRHMRTHTGEKPYKCDQCDYSAAHKYSLDIHL 1130
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + +H L H G+K +KC C Y A K L FH+
Sbjct: 136 YMCGECGYRAAQKSTLSDHMLTHTGEKPYKCDQCDYSAAYKSSLGFHL 183
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDYF ++ +H + H G+K + C C Y A K L FH+
Sbjct: 526 YKCDQCDYFATQKSSLDSHLVKHTGEKPYTCDQCDYSAAHKSSLNFHL 573
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + H H G+K FKC C Y A QK L H+ KHS
Sbjct: 913 YMCGECGYRAARKFTLSVHMRTHTGEKPFKCDQCDYSAAQKINLDNHIAAKHS 965
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + ++ H H G+K F+C C Y A QK LQ HV
Sbjct: 204 YMCGECGYRSAHKSDLSKHMRTHTGEKPFQCDQCDYSAAQKCDLQKHV 251
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H G+K +KC C Y A QK L HV
Sbjct: 260 YMCGECGYRAARKSHLSQHMRTHTGNKPYKCDQCDYSAAQKSTLDKHV 307
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 68 MEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQK 127
+E N P + P ++C C + ++R H H G+K +KC C Y A QK
Sbjct: 483 LEQRRNLPEVSTEKP----YMCGECGFQGRYPSDLRRHMRTHTGEKPYKCDQCDYFATQK 538
Query: 128 EKLQFHV 134
L H+
Sbjct: 539 SSLDSHL 545
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY ++ H H GDK + C C Y A QK L H+
Sbjct: 108 YKCYQCDYAAAGKSHLDRHLTKHTGDKPYMCGECGYRAAQKSTLSDHM 155
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T ++ H H G+K + C C Y A +K L H++
Sbjct: 582 YMCGECGYRTAHKADLSKHMRTHTGEKPYTCDQCDYSAARKSHLSAHMR 630
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A K L H+
Sbjct: 80 YMCGECGYRTAYKSHLSVHMRTHTGEKPYKCYQCDYAAAGKSHLDRHL 127
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY +++ H H GDK + C C Y A +K L H++
Sbjct: 232 FQCDQCDYSAAQKCDLQKHVTKHTGDKPYMCGECGYRAARKSHLSQHMR 280
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 87 FICVACDYFTIISQNMRNH-TLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY +++NH H G+K + C C Y YQ L H++
Sbjct: 1054 YKCDQCDYSAANKSSLKNHLAARHTGEKPYMCGECGYRTYQSSNLSRHMR 1103
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 14/96 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P +C C + NL L +H+ P ++C C+Y
Sbjct: 628 HMRTHTGQKPYTCDQCDYSAAQKFNLDQHLTKHNGEKP-----------YMCGECEYRAA 676
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+ H H G+K ++C C Y A +K L H
Sbjct: 677 QKLTLSKHMRTHTGEKPYRCDQCDYAAARKSDLDKH 712
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P +C C +++++ + L H +R + + C CDY
Sbjct: 600 HMRTHTGEKPYTCDQC-DYSAARKSHLSAH-------MRTHTGQKPYTCDQCDYSAAQKF 651
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+ H H G+K + C C Y A QK L H++
Sbjct: 652 NLDQHLTKHNGEKPYMCGECEYRAAQKLTLSKHMR 686
>gi|260789651|ref|XP_002589859.1| hypothetical protein BRAFLDRAFT_239175 [Branchiostoma floridae]
gi|229275043|gb|EEN45870.1| hypothetical protein BRAFLDRAFT_239175 [Branchiostoma floridae]
Length = 477
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
P PV F C C Y T + + H L H G+ +KC C YG +K L H+
Sbjct: 64 PTPVDKSFKCTQCSYSTARKRELARHKLKHSGNIPYKCDQCDYGTLRKSDLDAHM 118
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
F C C+Y T ++ +H H GD FKC CSYG +K L H
Sbjct: 10 FTCDQCEYSTRRESHLVSHKTRHTGDAPFKCDECSYGTLRKANLTRH 56
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+R K F C C+Y + ++ H ++H GD +KC C+Y + +K ++ H
Sbjct: 176 LRHATGKVSFKCAECNYVALKKSDLDKHMVMHTGDLPYKCDQCNYSSMKKSEITRHKVAV 235
Query: 138 HSTK 141
H+ K
Sbjct: 236 HTGK 239
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 49 IPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
IP C C T +L MVR + F C CDY T + + H
Sbjct: 97 IPYKCDQCDYGTLRKSDLDAH-------MVRHTGI-MPFKCNECDYGTGRRIDFKRHLRT 148
Query: 109 HLGDKQFKCCLCSY-GAYQKEKLQFHVKNKHST 140
H G+K FKC +C + A +K+ L H K +H+T
Sbjct: 149 HTGEKPFKCGMCDFRAAMKKQDLDRH-KLRHAT 180
>gi|260822986|ref|XP_002603964.1| hypothetical protein BRAFLDRAFT_71748 [Branchiostoma floridae]
gi|229289289|gb|EEN59975.1| hypothetical protein BRAFLDRAFT_71748 [Branchiostoma floridae]
Length = 1148
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
+F+C C + T ++ H + H GDK +KC C Y A QK L H+ KH+ V
Sbjct: 545 RFVCNECGFRTARRSHLNLHMMTHTGDKPYKCDQCDYSAAQKRHLDQHL-TKHTGHV 600
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 25/55 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F+C C Y T + + H H G+K +KC C Y A QK L H N K
Sbjct: 434 FVCGECGYRTAYNMTLARHMRTHTGEKPYKCDQCDYSAAQKYDLNNHRANHTGEK 488
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C + T + N+ H H G+K +KC C Y A +K L H
Sbjct: 490 YMCSECGFMTANTSNLAKHMRTHTGEKPYKCDHCDYAAARKSGLNRH 536
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C CDY T + H H G+K +KC C Y A L+ H+ KH+ +
Sbjct: 321 YMCEKCDYRTTQKSLLTIHVRTHTGEKPYKCDQCDYFAASNSTLRQHLITKHTGE 375
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 33/78 (42%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K + S+ + ++ N +R + + C CDY + H IH G+K+F
Sbjct: 488 KPYMCSECGFMTANTSNLAKHMRTHTGEKPYKCDHCDYAAARKSGLNRHQAIHTGEKRFV 547
Query: 117 CCLCSYGAYQKEKLQFHV 134
C C + ++ L H+
Sbjct: 548 CNECGFRTARRSHLNLHM 565
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 16/94 (17%)
Query: 50 PQSCKHCKNFTSSDV----NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
P C C F +S+ +L+ +H+ P +IC C Y T ++ H
Sbjct: 348 PYKCDQCDYFAASNSTLRQHLITKHTGEKP-----------YICGECGYRTTHKSDLSRH 396
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H ++ +KC C Y A K L+ H + KH+
Sbjct: 397 MRTHTEERPYKCDQCDYSAAWKTALKQH-RAKHT 429
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
VR + + C CDYF + +R H + H G+K + C C Y K L H++
Sbjct: 340 VRTHTGEKPYKCDQCDYFAASNSTLRQHLITKHTGEKPYICGECGYRTTHKSDLSRHMRT 399
>gi|260819146|ref|XP_002604898.1| hypothetical protein BRAFLDRAFT_136246 [Branchiostoma floridae]
gi|229290227|gb|EEN60908.1| hypothetical protein BRAFLDRAFT_136246 [Branchiostoma floridae]
Length = 282
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL----LMEHSENCPCMVRPDPVKYKFICVACDYFT 96
+M P C C + +L L++H++ P ++C C Y
Sbjct: 136 HMRTHTGEKPYKCDKCDYSAAQKSSLKTHHLLKHTDRKP-----------YLCGECGYRA 184
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ ++ H IH G+K +KC C Y A QK L H+
Sbjct: 185 ALKSSLSTHIRIHTGEKPYKCDQCGYSAAQKSSLNLHL 222
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T + H H G+K +KC C Y A QK L+ H KH+ +
Sbjct: 118 YMCGECGYRTAYKAGLLKHMRTHTGEKPYKCDKCDYSAAQKSSLKTHHLLKHTDR 172
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T + H H G+K +KC C Y K++L H KH+++
Sbjct: 5 YMCGQCGYRTNWKSQLSPHMRTHTGEKPYKCGQCDYSTAWKQQLDRHHLAKHTSE 59
>gi|260791422|ref|XP_002590728.1| hypothetical protein BRAFLDRAFT_89534 [Branchiostoma floridae]
gi|229275924|gb|EEN46739.1| hypothetical protein BRAFLDRAFT_89534 [Branchiostoma floridae]
Length = 360
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T +N+ H H G+K +KC C Y A QK L HV
Sbjct: 173 YMCGECGYRTGDKRNLSRHMKTHTGEKPYKCDQCDYSAAQKSNLDQHV 220
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C HC + +L L +HS P F+C C Y T
Sbjct: 247 HMRTHTGEKPYKCDHCDYSAAQKCHLNEHLAKHSGEKP-----------FMCGECGYRTA 295
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC C Y A K L+ H+
Sbjct: 296 FRGSLSRHMRTHTGEKPYKCDQCDYSAALKSTLKGHL 332
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + T+ NL +R K + C CDY + + H H
Sbjct: 116 PYMCGECGHRTAHKSNLTQH--------MRTHTGKKPYKCNQCDYSAAVKSTLDKHLTKH 167
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K + C C Y K L H+K
Sbjct: 168 TGEKPYMCGECGYRTGDKRNLSRHMK 193
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T N+ H H G+K +KC C Y A QK L H+ KHS
Sbjct: 229 YMCGECGYRTARRDNLSLHMRTHTGEKPYKCDHCDYSAAQKCHLNEHLA-KHS 280
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H H G+K + C C Y +++ L H++
Sbjct: 201 YKCDQCDYSAAQKSNLDQHVAKHTGEKPYMCGECGYRTARRDNLSLHMR 249
>gi|260823164|ref|XP_002604053.1| hypothetical protein BRAFLDRAFT_119781 [Branchiostoma floridae]
gi|229289378|gb|EEN60064.1| hypothetical protein BRAFLDRAFT_119781 [Branchiostoma floridae]
Length = 1324
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y T ++ H H G+K FKC C Y A QK + H+ KHS
Sbjct: 323 FMCGECGYRTAHKCHLSEHMKTHTGEKPFKCDQCDYSAAQKTHMDRHIVAKHS 375
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T N+ H IH +K FKC CSY A K KL H+ KH+ K
Sbjct: 198 YMCEVCGYRTTHKFNLSRHMRIHTEEKPFKCDQCSYSASDKSKLDKHLA-KHAGK 251
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y ++ H H G+K FKC C + A QK L H KH+ +
Sbjct: 85 YMCGECGYRAAQKHHLSRHMRTHTGEKPFKCDQCDFSAAQKSTLDNHTVAKHTGE 139
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C Y T N+ H H G+K +KC LC Y A QK L H++ KH+ +
Sbjct: 436 YKCGECGYKTAKKANLFRHMRTHTGEKPYKCDLCDYSAAQKCALDQHMR-KHTGE 489
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 11/75 (14%)
Query: 60 TSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL 119
T D +++ +HS+ P ++C C Y ++ H IH G+K +KC
Sbjct: 364 THMDRHIVAKHSDEKP-----------YMCGECGYRATQKAHLSQHMRIHTGEKPYKCDQ 412
Query: 120 CSYGAYQKEKLQFHV 134
C Y K L H+
Sbjct: 413 CDYTVAHKSSLNDHM 427
>gi|260806368|ref|XP_002598056.1| hypothetical protein BRAFLDRAFT_108629 [Branchiostoma floridae]
gi|229283327|gb|EEN54068.1| hypothetical protein BRAFLDRAFT_108629 [Branchiostoma floridae]
Length = 424
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T + H H G+K +KC C Y A K L +HV KHS +
Sbjct: 357 YLCKECGYRTTQKPTLLRHMRTHTGEKPYKCDQCDYSAAVKVNLDYHVAAKHSGQ 411
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D ++ +HS P + ++C C + T + H H G+K +KC +C Y
Sbjct: 276 DYHIATKHSGEKPYIRAKHTGDKPYMCGECGHRTAQKADFAKHMRTHTGEKPYKCHMCDY 335
Query: 123 GAYQKEKLQFHVKNKHSTK 141
A +K L H+ +H+++
Sbjct: 336 SAARKFSLDNHMAARHASE 354
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 29/150 (19%)
Query: 4 WEQCLLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVI-----------PQS 52
W+QC +T+K+ L +K+V D C C + S++ P
Sbjct: 121 WDQCDYS--ATQKSHL--DKHVAKHTDEKPYMCGECGYRASYKSILAKHMRTHTREKPYK 176
Query: 53 CKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
C C+ + NL L +H+ P ++C C Y + H H
Sbjct: 177 CDLCEYSAAQKSNLDEHLAKHTGEKP-----------YMCGECGYRATRKDYLSKHMRTH 225
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y A K L H+ KH+
Sbjct: 226 TGEKPYKCDQCDYSAALKSSLNKHIAAKHT 255
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+P + F+ C Y ++ H IH G+K +K C Y A QK L HV
Sbjct: 85 NPGEGPFMSDQCGYGAAQKASLSVHMRIHTGEKPYKWDQCDYSATQKSHLDKHV 138
>gi|260819172|ref|XP_002604911.1| hypothetical protein BRAFLDRAFT_136114 [Branchiostoma floridae]
gi|229290240|gb|EEN60921.1| hypothetical protein BRAFLDRAFT_136114 [Branchiostoma floridae]
Length = 452
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+++ + P SC C T+ +L + H+++ P F C CDY
Sbjct: 277 HLARHSGEKPFSCGQCGYRTAKKSDLSRHVHTHTKDKP-----------FKCDQCDYSAA 325
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++++H H G+K FKC C YG Q+ L H++
Sbjct: 326 DKASLKHHLAKHTGEKPFKCGQCGYGTTQRIALTIHMR 363
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C C Y ++ H IH G+K +KC C Y A +K L +H+K
Sbjct: 6 FKCGDCGYRGAKKYDLSRHIRIHTGEKPYKCDQCDYTAAEKSSLNYHLKK 55
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C ++T+++ + L H ++ + F+C C Y ++ H +H
Sbjct: 33 PYKCDQC-DYTAAEKSSLNYH-------LKKHTGERPFMCGDCGYRATKQSDLTKHIRVH 84
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G++ +KC C Y A +K L H+ KH+++
Sbjct: 85 TGERPYKCDQCDYSAKEKSSLNQHMIYKHTSE 116
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
FIC C Y T N+ H +H G+K +KC C Y A K L H+
Sbjct: 231 FICGECGYRTAKKSNLVIHMRVHTGEKPYKCDQCDYSAAHKPHLDEHL 278
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C+Y ++R H H G+K +KC C Y A Q LQ+H+
Sbjct: 175 YKCDTCEYRAARKTHLRLHMRTHTGEKPYKCNQCDYSAAQMSVLQYHL 222
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + +H +H G K +KC C Y A +K L+ H++
Sbjct: 147 YKCDQCDYSAARKTTLDDHKTLHSGKKPYKCDTCEYRAARKTHLRLHMRT 196
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY T N+ H H G+K + C C Y ++ L H++
Sbjct: 371 YKCDQCDYATAGRSNLNKHMTTHTGEKPYMCGECGYRTTRRTHLIQHIRT 420
>gi|405950945|gb|EKC18899.1| Transcriptional repressor CTCF [Crassostrea gigas]
Length = 1502
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 52 SCKHCK--NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
SC+ C ++ D+ M+ +N P + K C C + T ++ H LIH
Sbjct: 837 SCEECGLMTYSKKDMRQHMKFHKNGPEL--------KLFCEQCSFVTDCESRLKRHVLIH 888
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
++ ++C LC Y QKE + H+K +H
Sbjct: 889 SHERPYQCGLCDYRGSQKEHVLRHMKTQH 917
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
C C+Y S N++ H IHL ++ C C QK L+ H+K KH K
Sbjct: 744 CEYCNYVAATSSNLKRHQNIHLDVREHHCDQCGQTFRQKIHLERHIKYKHEEK 796
>gi|308473675|ref|XP_003099061.1| hypothetical protein CRE_27760 [Caenorhabditis remanei]
gi|308267715|gb|EFP11668.1| hypothetical protein CRE_27760 [Caenorhabditis remanei]
Length = 302
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 25/146 (17%)
Query: 7 CLLVPLSTKKTCLYCNK------YVPSDIDVFIGHCQTCPNMSFLNSVIPQ--------- 51
C L P +K+ N+ ++ +D C+ CP+ F I Q
Sbjct: 161 CQLCPEEEQKSMDLSNQQQMEEHFLDKHVDKEKRKCEACPSDQFQPHNIGQHYRLHTNSV 220
Query: 52 -SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
+C+HC N LM H VR + + C C + +R H L+H
Sbjct: 221 YACQHCGK--RGRRNYLMSH-------VRTHTGERPYSCDTCSKSFSDASTLRRHRLVHT 271
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K+++C +C +K+ ++ H+++
Sbjct: 272 GEKKYQCPVCGRAIARKDNVKVHIRS 297
>gi|339429|gb|AAA72344.1| unnamed protein product [Homo sapiens]
Length = 801
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C +R H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELRKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 599
>gi|33239440|ref|NP_003402.2| zinc finger Y-chromosomal protein isoform 1 [Homo sapiens]
gi|51338719|sp|P08048.3|ZFY_HUMAN RecName: Full=Zinc finger Y-chromosomal protein
gi|4314425|gb|AAD15612.1| zinc finger protein ZFY [Homo sapiens]
gi|6650687|gb|AAF21973.1| Y-linked zinc finger protein [Homo sapiens]
gi|92098091|gb|AAI14961.1| Zinc finger protein, Y-linked [Homo sapiens]
gi|119623177|gb|EAX02772.1| zinc finger protein, Y-linked [Homo sapiens]
Length = 801
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C +R H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELRKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 599
>gi|260822992|ref|XP_002603967.1| hypothetical protein BRAFLDRAFT_71745 [Branchiostoma floridae]
gi|229289292|gb|EEN59978.1| hypothetical protein BRAFLDRAFT_71745 [Branchiostoma floridae]
Length = 878
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++C C Y + H IH G+K +KC C Y QK L HV+ KH++K+
Sbjct: 823 YMCGECGYRAAQRSTLSQHMRIHTGEKPYKCDQCDYSTVQKSHLNRHVR-KHTSKM 877
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFT----I 97
M P C C +++++D + L++H R + ++C C Y + I
Sbjct: 674 MRTHTGEKPYKCDQC-DYSAADQSWLVKHK-------RKHTGEKPYMCDECGYRSDRKPI 725
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++Q+MR HT G+K +KC C Y A QK L H + +HS K
Sbjct: 726 LAQHMRTHT----GEKPYKCDQCDYSAAQKHHLIDH-QTRHSGK 764
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++C C Y ++ H IH G+K +KC C Y A +K L HV+ KHS ++
Sbjct: 213 YMCGECGYRANQKSHLSRHMKIHTGEKPYKCDQCDYSASRKYFLDNHVR-KHSGEM 267
>gi|260789381|ref|XP_002589725.1| hypothetical protein BRAFLDRAFT_100848 [Branchiostoma floridae]
gi|229274907|gb|EEN45736.1| hypothetical protein BRAFLDRAFT_100848 [Branchiostoma floridae]
Length = 661
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+IC C + T+ ++ H H GDK +KC C Y A +K L++H+ N
Sbjct: 413 YICDECGHRTVRKSDLSQHMRTHTGDKPYKCDQCDYSAAKKCHLKYHLAN 462
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L +H+ + P ++C C Y T+
Sbjct: 543 HMRTHTGEKPYKCDQCDYSATKKCNLHYHLAKHTGDKP-----------YMCGECGYRTV 591
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ ++ H H G+K +KC C Y A K L H+
Sbjct: 592 LKSDLAKHMTTHTGEKPYKCDQCDYSAALKSSLDRHL 628
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y T ++ H H G+K +KC C Y A K L H+
Sbjct: 88 YICDECGYRTARKSDLSQHIRTHTGEKAYKCDQCDYSAAHKSDLSRHL 135
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 14/93 (15%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C T+ NL L +H+ + P ++C C Y T
Sbjct: 246 HMKTHTGYKPYRCDQCDYSTAQKANLDRHLAKHTGDKP-----------YMCGDCGYRTA 294
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
+ H H G+K +KC C Y A K L
Sbjct: 295 WQSELSRHMRTHTGEKPYKCDQCDYSAAHKANL 327
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C T+ NL +R + + C CDY ++ H H
Sbjct: 468 PYMCGECGYRTTQKCNLTQH--------MRTHTGEKPYKCDQCDYSAARKHHLDQHLAKH 519
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
GDK + C C Y A +K L H++
Sbjct: 520 TGDKPYMCGECGYRAARKSDLSIHMRT 546
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C TS +L L++H+ P + C CDY
Sbjct: 162 HMRIHTGEKPYKCDQCDYSTSRKFSLDQHLVKHTGEKP-----------YSCDQCDYSAA 210
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ H H GDK + C C Y + K L H+K
Sbjct: 211 RKSTFKQHLAKHAGDKPYMCGECGYRSTLKSTLSRHMKT 249
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY T N+ H H GDK + C C Y + +L H++
Sbjct: 256 YRCDQCDYSTAQKANLDRHLAKHTGDKPYMCGDCGYRTAWQSELSRHMRT 305
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 37/93 (39%)
Query: 43 SFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNM 102
+ ++ PQS K + + + +R + + C CDY ++
Sbjct: 72 TATSASQPQSDTDAKPYICDECGYRTARKSDLSQHIRTHTGEKAYKCDQCDYSAAHKSDL 131
Query: 103 RNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H +H G+K + C C Y A +K L H++
Sbjct: 132 SRHLTMHTGEKSYMCGECGYRAARKFYLSEHMR 164
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H G+K +KC C Y A +K L +H+
Sbjct: 525 YMCGECGYRAARKSDLSIHMRTHTGEKPYKCDQCDYSATKKCNLHYHL 572
>gi|260782904|ref|XP_002586520.1| hypothetical protein BRAFLDRAFT_139771 [Branchiostoma floridae]
gi|229271635|gb|EEN42531.1| hypothetical protein BRAFLDRAFT_139771 [Branchiostoma floridae]
Length = 247
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + +L L +H+ N P ++C C Y T ++ +H
Sbjct: 102 PYKCDQCDYSAAQKSSLDHHLAKHTGNKP-----------YMCEECGYRTTKKSHLSDHM 150
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IH G+K +KC LC + A +K L H+
Sbjct: 151 IIHTGEKPYKCDLCDFSAAKKSNLDQHL 178
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H GDK +KC C Y A QK L H+
Sbjct: 187 YMCGKCGYMTDRKSDLSRHMRTHTGDKPYKCDQCDYSAAQKSSLNQHL 234
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H DK +KC C Y A QK L H+
Sbjct: 75 YMCGECGYVTDRKSGLSRHMRTHTDDKPYKCDQCDYSAAQKSSLDHHL 122
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y + H H G+K +KC C Y A QK L H+
Sbjct: 19 YICWECGYRAAYKYALSRHMRTHTGEKPYKCDQCDYSAAQKSHLDQHL 66
>gi|403282647|ref|XP_003932753.1| PREDICTED: transcriptional repressor CTCFL [Saimiri boliviensis
boliviensis]
Length = 599
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ +++
Sbjct: 344 FKCSMCTYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGVHIRN 401
>gi|260792112|ref|XP_002591071.1| hypothetical protein BRAFLDRAFT_69374 [Branchiostoma floridae]
gi|229276271|gb|EEN47082.1| hypothetical protein BRAFLDRAFT_69374 [Branchiostoma floridae]
Length = 958
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P +C+ C + ++ +++ H+ PD C C Y + ++ H IH
Sbjct: 801 PYTCEEC-GYRTTMRSMMTRHARTHTGEKPPD-------CEVCGYSAVDKNDLDRHLRIH 852
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K FKC C Y A Q+ L H++
Sbjct: 853 TGEKPFKCTECGYQAAQRSALTNHLR 878
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
FIC C + I + H IH G+K F C C Y + L+ H+K
Sbjct: 746 FICGECGHREISRSKLEAHMRIHTGEKPFSCAECGYKTAFRGNLEKHLK 794
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY +RNH IH G F C C + A K + H+K
Sbjct: 886 YACPECDYRAAQKSALRNHMEIHRGGILFMCTECGFRAANKNTMVAHMK 934
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 79 RPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
R K +C C Y T + H H G++ F C C Y + QK LQ H+K
Sbjct: 126 RTKTGKAILVCGECGYRTDHKGHFGRHVKTHTGERLFACEECEYRSNQKYALQRHMK 182
>gi|260813549|ref|XP_002601480.1| hypothetical protein BRAFLDRAFT_241801 [Branchiostoma floridae]
gi|229286776|gb|EEN57492.1| hypothetical protein BRAFLDRAFT_241801 [Branchiostoma floridae]
Length = 135
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C T+ NL + H+ + P ++CV C Y T
Sbjct: 45 HMRTHTGEKPYKCDQCDYSTAKKGNLDYHIANHTGDKP-----------YMCVDCGYRTA 93
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H H G K++KC C Y A +K L H++
Sbjct: 94 RKSDLSRHMRTHTGQKRYKCDQCDYSATKKGYLDRHIRQ 132
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y T ++ H H G+K +KC C Y +K L +H+ N
Sbjct: 27 YMCGECGYRTAYKSDLSQHMRTHTGEKPYKCDQCDYSTAKKGNLDYHIAN 76
>gi|260810911|ref|XP_002600166.1| hypothetical protein BRAFLDRAFT_204472 [Branchiostoma floridae]
gi|229285452|gb|EEN56178.1| hypothetical protein BRAFLDRAFT_204472 [Branchiostoma floridae]
Length = 477
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C HC+ T NL ++ H+ P F+C C Y T + N+ H
Sbjct: 59 PYRCDHCEYSTEKYCNLYQHMLIHTGTKP-----------FMCGECGYRTNLKHNLVIHM 107
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
H G+K +KC C Y + ++ L+ H+ KH+ +
Sbjct: 108 RRHTGEKPYKCDQCDYSSVERSSLRKHIMAKHTNE 142
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 33/79 (41%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K + + + + + +R + +IC C + T N+ +H LIH G+K +
Sbjct: 201 KQYVCGECGMTTAYKSSLTLHMRRHTGEKPYICYECGFETSRKGNLDDHMLIHTGEKPYM 260
Query: 117 CCLCSYGAYQKEKLQFHVK 135
C C + + L H +
Sbjct: 261 CKECGFRTASRSHLYVHAR 279
>gi|242009606|ref|XP_002425574.1| zinc finger protein, putative [Pediculus humanus corporis]
gi|212509453|gb|EEB12836.1| zinc finger protein, putative [Pediculus humanus corporis]
Length = 821
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
K KF+C++C + + H+L+H +K +KC +C Y++++L FHV
Sbjct: 346 KGKFVCLSCGLLLPTKEKFKEHSLVHESEKIWKCKICKMKFYRRQQLLFHV 396
>gi|223717965|ref|NP_001138747.1| zinc finger Y-chromosomal protein isoform 2 [Homo sapiens]
gi|89365981|gb|AAI14527.1| ZFY protein [Homo sapiens]
Length = 724
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C +R H I
Sbjct: 440 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELRKHMRI 488
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 489 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 522
>gi|392933931|ref|NP_001255974.1| transcriptional repressor CTCFL isoform 5 [Homo sapiens]
Length = 627
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 396
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|260803525|ref|XP_002596640.1| hypothetical protein BRAFLDRAFT_280239 [Branchiostoma floridae]
gi|229281899|gb|EEN52652.1| hypothetical protein BRAFLDRAFT_280239 [Branchiostoma floridae]
Length = 318
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 46 NSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
+ P +C C N+TS L H+ N V D K C C ++T + H
Sbjct: 222 SDARPFACDKC-NYTSKTKEGLCRHNNN----VHSD---RKLTCPHCGFYTFQKSTLEKH 273
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
+H D+Q KC C+YG + L+ H++ H+ K
Sbjct: 274 MDLHSDDRQHKCPHCTYGFKESNALKRHIEEVHAGKT 310
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 46 NSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
+ P +C C N+TS L H+ N V D K C C ++T + H
Sbjct: 108 SDARPFACDKC-NYTSKTKEGLCRHNNN----VHSD---RKLTCPHCGFYTFQKSTLEKH 159
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+H D+Q KC C+YG + L+ H++ H+
Sbjct: 160 MDLHSDDRQHKCPQCTYGFKESNALKRHIEEVHA 193
>gi|111550152|gb|ABH10098.1| BORIS transcription factor transcript variant C4 [Homo sapiens]
Length = 427
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRT 391
>gi|111550164|gb|ABH10104.1| BORIS transcription factor transcript variant A5 [Homo sapiens]
Length = 627
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 396
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|260835640|ref|XP_002612816.1| hypothetical protein BRAFLDRAFT_82173 [Branchiostoma floridae]
gi|229298196|gb|EEN68825.1| hypothetical protein BRAFLDRAFT_82173 [Branchiostoma floridae]
Length = 272
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
C C Y T S + H +IH G + +KC LC Y A QK L+ H+ KHS++
Sbjct: 78 TCSECGYKTAYSITLSRHMMIHAGYRPYKCHLCDYAASQKRGLEKHM-AKHSSE 130
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +F+++ N L +H +++ K +IC C Y T
Sbjct: 151 HMRTHTGEKPYKCDQC-DFSAAQKNTLDQH------LLKHSGEK-PYICTECGYRTAQKS 202
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H G++ +KC C Y A +K L H + KH+
Sbjct: 203 HLSKHLRTHTGERPYKCDQCDYSAAEKSTLDKH-RRKHT 240
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C C Y T N+ H IH +K +KC C Y A QK L H+
Sbjct: 21 FSCGECGYRTARKSNLSLHRRIHTQEKPYKCGQCDYSAAQKSALNQHL 68
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H G+K +KC C + A QK L H+
Sbjct: 133 YVCWECGYRTAYRSNLSVHMRTHTGEKPYKCDQCDFSAAQKNTLDQHL 180
>gi|313246390|emb|CBY35302.1| unnamed protein product [Oikopleura dioica]
Length = 347
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 26/59 (44%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
+F C C NMR H IH G+ F C +C G QK LQ+H HS D
Sbjct: 15 QFECPECGKMFSQHSNMRRHHRIHTGESLFDCNICGRGFIQKVALQYHQSTMHSDGTND 73
>gi|260832630|ref|XP_002611260.1| hypothetical protein BRAFLDRAFT_71215 [Branchiostoma floridae]
gi|229296631|gb|EEN67270.1| hypothetical protein BRAFLDRAFT_71215 [Branchiostoma floridae]
Length = 790
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M V P C C + NL + +H+ N P F+C C Y T+
Sbjct: 640 HMRTHTGVRPYKCDQCNFSAAQKCNLDGHMAQHTGNKP-----------FMCGECGYRTV 688
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K +KC C Y + +K L H+
Sbjct: 689 HKSKLSRHMTTHTGEKPYKCDHCDYSSARKSDLDRHM 725
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
V +F C CDY + HT H G+K +KC C Y A QK L H+
Sbjct: 457 VDKRFSCSECDYRAAFRSKLLIHTRKHTGEKPYKCDQCDYSAAQKGNLDQHM 508
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
V +F C CDY + HT H G+K +KC C Y A ++ L H+
Sbjct: 55 VDKRFSCTECDYRAAFRSQLLIHTRKHTGEKPYKCDQCDYSAARQGNLDQHM 106
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M+ P C HC ++ +L + +H+ P ++C C Y T
Sbjct: 696 HMTTHTGEKPYKCDHCDYSSARKSDLDRHMAKHTGEKP-----------YMCGECGYKTT 744
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G K +KC C Y A +K + H+
Sbjct: 745 GRSSLTRHMRTHTGVKPYKCDQCDYSAAKKSDVDRHM 781
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY N+ H + H G+K + C C Y + + L H++
Sbjct: 143 YKCDQCDYSAAQKGNLEQHMIKHTGEKPYMCGECGYRSADRSALTVHMRG 192
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H + H G+K + C C Y + +L H+K
Sbjct: 489 YKCDQCDYSAAQKGNLDQHMVKHTGEKPYLCQECGYRTADRSRLSVHMK 537
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G K +KC C Y A QK L+ H+
Sbjct: 115 YLCQECGYRTADRSRLFVHMKTHTGMKPYKCDQCDYSAAQKGNLEQHM 162
>gi|440902858|gb|ELR53593.1| Zinc finger protein 64-like protein, isoforms 1 and 2, partial [Bos
grunniens mutus]
Length = 562
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+R P F C C IS +++ H +H G+K FKC CS K L+ H++ K
Sbjct: 235 LRSPPGDAPFQCWLCSAKFKISSDLKRHMRVHSGEKPFKCEFCSVRCTMKGNLKSHIRIK 294
Query: 138 HS 139
HS
Sbjct: 295 HS 296
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 34/98 (34%), Gaps = 22/98 (22%)
Query: 53 CKHCKNFTSSDVNLL-------MEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
C HC S L EH E CP C Y +R H
Sbjct: 302 CPHCDFLGDSKATLRKHSRLHQAEHPEKCP---------------DCSYSCPSKAALRVH 346
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+ +H D+ FKC CS+ Q L HVK H +K
Sbjct: 347 SRVHCPDRPFKCSHCSFDTKQPSNLAKHVKKFHGDALK 384
>gi|354506403|ref|XP_003515251.1| PREDICTED: zinc finger protein 420-like [Cricetulus griseus]
Length = 604
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D++L+ +HS + YK C CD +N+RNH IH G+K +KC C
Sbjct: 244 DISLITKHSLIIHQRIHTGEKPYK--CSECDRSLTTKRNLRNHQRIHTGEKPYKCSECEK 301
Query: 123 GAYQKEKLQFHVK 135
K+ L+ H +
Sbjct: 302 SFSNKDNLRIHQR 314
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CD +N+RNH IH G+K +KC K+ L+ H +
Sbjct: 378 YKCGECDKSLTSKRNLRNHQRIHTGEKPYKCSEYDKSFSNKDTLRAHQR 426
>gi|260823124|ref|XP_002604033.1| hypothetical protein BRAFLDRAFT_119785 [Branchiostoma floridae]
gi|229289358|gb|EEN60044.1| hypothetical protein BRAFLDRAFT_119785 [Branchiostoma floridae]
Length = 954
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
NF D L E + V + + IC C Y T+ ++ H H G+K +KC
Sbjct: 278 NFPQPDNTLAQESRGDVGRHVFKETGEKSHICWECGYKTVQKSDLSKHMKTHTGEKPYKC 337
Query: 118 CLCSYGAYQKEKLQFHVK 135
C Y A K L H++
Sbjct: 338 DQCDYSAAHKSHLDRHLR 355
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ HT H G+K +KC C Y A +K L +H+
Sbjct: 162 YMCGECGYRTDRKSHLSRHTRTHTGEKPYKCDQCDYSAARKSTLDYHL 209
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+IC C Y + ++ H H G+K +KC C Y A QK L H++
Sbjct: 789 YICGECGYRAVHKSDLSKHMRTHTGEKPYKCDQCDYSAAQKSTLDQHLR 837
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C+ ++++ + L +H +R + ++C C + T +
Sbjct: 694 HMKTHTGEKPYKCDQCE-YSAARKSTLDKH-------LRKHTGEKPYMCGECGFRTTHKE 745
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H G+K +KC C Y A +K L H KHS
Sbjct: 746 SLSRHMRTHTGEKPYKCDQCDYSAARKSTLDNHTVAKHS 784
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L +H +R ++C C Y T
Sbjct: 807 HMRTHTGEKPYKCDQC-DYSAAQKSTLDQH-------LRKHTGDKPYMCGECGYRTAQKS 858
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G K +KC C Y A +K H+
Sbjct: 859 NLSTHMRTHTGKKSYKCNQCDYAAARKSTWDIHL 892
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y N+ H H DK +KC C Y A QK L H
Sbjct: 901 YMCGECGYRAAQRSNLSRHMKTHTADKPYKCDQCDYSAAQKSTLNKH 947
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y ++ H H GDK +KC C Y + K L H+ KH+
Sbjct: 507 YMCDECGYSAFHKSDLSRHMRTHTGDKPYKCDQCDYSSAHKSALDRHLVVKHT 559
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 17/99 (17%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSS-----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
+M P C C +++S+ D +L+++H+ P ++C C +
Sbjct: 525 HMRTHTGDKPYKCDQC-DYSSAHKSALDRHLVVKHTGEKP-----------YMCGECGHR 572
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
T + H H G+K +KC C Y A QK L H+
Sbjct: 573 TAFKSRLSLHMRTHTGEKPYKCDQCDYSAAQKSSLDQHL 611
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D +L+++H+ P ++C C + T + H H G+K +KC C Y
Sbjct: 404 DRHLVVKHTGEKP-----------YMCGECGHRTASKSRLSLHMRTHTGEKPYKCDQCDY 452
Query: 123 GAYQKEKLQFHV 134
A QK L H+
Sbjct: 453 SAAQKSSLDQHL 464
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + + +H H G+K + C C Y A Q+ L H+++
Sbjct: 78 YNCDQCDYSFAVKHQLIDHQTRHTGEKPYMCGECGYRAAQRSTLSRHMRS 127
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 21/49 (42%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + H H GDK + C C Y QK L H++
Sbjct: 817 YKCDQCDYSAAQKSTLDQHLRKHTGDKPYMCGECGYRTAQKSNLSTHMR 865
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI-HLGDKQF 115
K + + H E+ +R + + C CDY + NHT+ H G+K +
Sbjct: 730 KPYMCGECGFRTTHKESLSRHMRTHTGEKPYKCDQCDYSAARKSTLDNHTVAKHSGEKPY 789
Query: 116 KCCLCSYGAYQKEKLQFHVK 135
C C Y A K L H++
Sbjct: 790 ICGECGYRAVHKSDLSKHMR 809
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L +H M R + + C CDY
Sbjct: 435 HMRTHTGEKPYKCDQC-DYSAAQKSSLDQHLSKHTDM-RTHTGEKPYKCDQCDYSAAQKS 492
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++ H H G+K + C C Y A+ K L H++
Sbjct: 493 SLDQHLSKHTGEKPYMCDECGYSAFHKSDLSRHMR 527
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H H G+K + C C Y A+ K L H++
Sbjct: 335 YKCDQCDYSAAHKSHLDRHLRKHTGEKPYMCDECGYSAFHKSDLSRHMR 383
>gi|260785595|ref|XP_002587846.1| hypothetical protein BRAFLDRAFT_227657 [Branchiostoma floridae]
gi|229273000|gb|EEN43857.1| hypothetical protein BRAFLDRAFT_227657 [Branchiostoma floridae]
Length = 216
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++T+S + + H + RP ++C C + + +
Sbjct: 64 HMRTHTGERPYKCDQC-DYTASSYSTMDSHKKR-HTGERP------YVCELCGHRSKVKG 115
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H ++H G+KQ+KC LC + A K L H+
Sbjct: 116 DLNRHMVLHTGEKQYKCSLCDFSAIWKASLDAHL 149
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+F+C C Y T+ M H H G++ +KC C Y A + H K
Sbjct: 45 RFMCGECGYRTVYKNAMFKHMRTHTGERPYKCDQCDYTASSYSTMDSHKKR 95
>gi|223717973|ref|NP_001138748.1| zinc finger Y-chromosomal protein isoform 3 [Homo sapiens]
gi|194375113|dbj|BAG62669.1| unnamed protein product [Homo sapiens]
Length = 610
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C +R H I
Sbjct: 326 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELRKHMRI 374
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 375 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 408
>gi|348503081|ref|XP_003439095.1| PREDICTED: zinc finger protein 64 homolog, isoforms 1 and 2-like
[Oreochromis niloticus]
Length = 673
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C CD I+ +++ H IH G+K +KC C Y K L+ H++ KH T+
Sbjct: 206 FQCQQCDAKFKINSDLKRHIRIHSGEKPYKCDFCEYRCAMKGNLKSHIQIKHGTE 260
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
C C Y ++ H IH D+ FKC C++ + Q+ L H K HS K++
Sbjct: 293 CSKCTYSCSSKGALKVHERIHSEDRPFKCDFCNFASKQRSNLVIHKKKCHSDKLE 347
>gi|260823104|ref|XP_002604023.1| hypothetical protein BRAFLDRAFT_71688 [Branchiostoma floridae]
gi|229289348|gb|EEN60034.1| hypothetical protein BRAFLDRAFT_71688 [Branchiostoma floridae]
Length = 1395
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++CV C Y T ++ H IH G++ +KC C Y A K L+ HV + K
Sbjct: 1005 YMCVECGYRTDKKSHLSRHMRIHTGERPYKCDQCDYSAADKSTLEQHVAKHNGEK 1059
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++D + L +H V + ++C C Y T
Sbjct: 1023 HMRIHTGERPYKCDQC-DYSAADKSTLEQH-------VAKHNGEKPYMCGDCGYRTAYRS 1074
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++ H IH G++ +C C Y A K L+ HV KHS +
Sbjct: 1075 HLSRHIRIHTGERPLQCDQCGYSAAHKSTLEQHVA-KHSGE 1114
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L +H +R + +IC C Y T
Sbjct: 110 HMRTHTGERPYKCDQC-DYSAAQKSTLDQH-------LRKHTGEKPYICGECGYRTAHKV 161
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC LC Y A QK L H+
Sbjct: 162 SLSRHMRTHTGEKPYKCDLCDYSAAQKSNLVQHL 195
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 67 LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQ 126
++E+++ PCM C C Y T ++ H H G++ +KC C Y A Q
Sbjct: 83 VVENTDEKPCM-----------CGECGYRTAQKSDLTKHMRTHTGERPYKCDQCDYSAAQ 131
Query: 127 KEKLQFHVK 135
K L H++
Sbjct: 132 KSTLDQHLR 140
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G++ +KC C Y A QK L HV
Sbjct: 756 YMCGECGYRTTRKSHLSAHMRTHTGERPYKCDKCDYSAAQKGDLNKHV 803
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+R + ++ C CDY Q + +H H G K + C C Y A Q+ L H+K
Sbjct: 1192 IRTHTGERRYKCGQCDYSAARRQYLIDHQTRHTGKKPYMCGECGYRAAQRSTLSQHMK 1249
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 8/93 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+MS P C C + +NL+ + RP ++C C Y
Sbjct: 278 HMSIHTGEKPYKCDQCDYSAAEKLNLIDHQRRHT--GERP------YMCGECGYRAAQRS 329
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+ H H G+K +KC C Y A +K L H
Sbjct: 330 TLSQHMRTHTGEKPYKCDQCDYSAARKSTLNKH 362
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
K ++C C Y + H H G+K +KC C Y A +K KL H+
Sbjct: 1226 KKPYMCGECGYRAAQRSTLSQHMKTHTGEKPYKCNQCDYSAAKKYKLAEHL 1276
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
FIC C Y ++ H H G+K +KC C Y A K L H + +HS +
Sbjct: 1285 FICEECGYRAARKPDLSRHMRTHTGEKPYKCDQCDYSASHKHHLIDHQR-RHSGE 1338
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+IC C + ++ H H G++ +KC C Y A QK L+ H
Sbjct: 1117 YICGVCGHRANQKSDLSRHIRTHTGERPYKCDQCDYSAAQKSTLEEH 1163
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + H IH G+K F C C Y A +K L H++
Sbjct: 1257 YKCNQCDYSAAKKYKLAEHLTIHTGEKPFICEECGYRAARKPDLSRHMR 1305
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ +H H G++ + C C Y A Q+ L H++
Sbjct: 288 YKCDQCDYSAAEKLNLIDHQRRHTGERPYMCGECGYRAAQRSTLSQHMR 336
>gi|260822859|ref|XP_002602235.1| hypothetical protein BRAFLDRAFT_121485 [Branchiostoma floridae]
gi|229287542|gb|EEN58247.1| hypothetical protein BRAFLDRAFT_121485 [Branchiostoma floridae]
Length = 509
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H G+K +KC C Y A QK L H+
Sbjct: 30 YMCGECGYKTAWRSNLSQHRRTHTGEKPYKCDQCDYSAAQKSSLAIHL 77
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H H GDK + C C + A QK L HV+
Sbjct: 114 YKCNQCDYSATCKSNLDRHLAKHSGDKPYMCEECGFRAAQKSDLSIHVR 162
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M N P C C + +L L +HS P ++C C Y T
Sbjct: 216 HMRTHNGEKPYKCDKCDYSAARKCHLDQHLAKHSGEKP-----------YMCGECGYRTA 264
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ H H G K +KC C Y A +K H+ N
Sbjct: 265 QKYRLSRHMRTHTGQKPYKCDQCDYSAAEKANFDRHLAN 303
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A QK L H+
Sbjct: 310 YMCGDCGYRTTRKPDLAKHMRTHTGEKPYKCDQCDYSALQKSDLYKHL 357
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + + + H H G+K +KC C Y A Q L H+
Sbjct: 366 YMCGECGYRSALKSTLSKHMRTHTGEKPYKCDQCDYSAAQTSALNQHL 413
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
VR + + C CDY + + H H G+K + C C Y + +K L H++
Sbjct: 161 VRTHTGEKPYKCDQCDYSAAVKSTLDRHQAKHTGEKPYICGECGYRSARKFDLSLHMRTH 220
Query: 138 HSTK 141
+ K
Sbjct: 221 NGEK 224
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T+ ++ H H G+K +KC C Y A K L H+
Sbjct: 422 YMCGECGYRTVKKCHLSEHMRTHTGEKPYKCDHCDYSAAVKSSLDRHL 469
>gi|260822855|ref|XP_002602233.1| hypothetical protein BRAFLDRAFT_216733 [Branchiostoma floridae]
gi|229287540|gb|EEN58245.1| hypothetical protein BRAFLDRAFT_216733 [Branchiostoma floridae]
Length = 534
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
IC C Y T I + H H G++ +KC C Y A QK L H+ +H+
Sbjct: 17 ICGFCGYVTGIKSRLSQHMRTHTGERPYKCDQCDYSAAQKGHLNIHIALRHT 68
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T N+ H H G++ +KC C Y A QK L H+ +H+
Sbjct: 73 YMCGECGYRTAHKSNLSKHMTNHTGERPYKCDRCDYSAAQKLTLDNHIAARHT 125
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C N++++ L EH +P ++C C Y T + H H
Sbjct: 239 PYRCDQC-NYSAARKPTLEEHIAGKHTGEKP------YMCGECGYRTAYRSALSQHMRTH 291
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y A K L HV H+
Sbjct: 292 TGEKPYKCDQCDYSAAYKYSLNRHVTAMHT 321
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C +C + T ++ H H G+K +KC C Y A +K L HV KH+
Sbjct: 326 YMCDSCGFGTARKFSLFQHMRTHTGEKPYKCDQCYYSAARKPNLDLHVAAKHT 378
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T ++ H H G+K +KC C Y A K L+ H+
Sbjct: 130 FMCGECGYRTARKSSLSGHFRTHTGEKPYKCDQCGYSAATKSALKNHL 177
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y ++NH + H G K + C C + A Q+ L FH++
Sbjct: 158 YKCDQCGYSAATKSALKNHLVTHTGAKPYICGDCGFRAAQRCGLSFHMR 206
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D+++ +H+ + P ++C C Y + + H H G+K +KC C Y
Sbjct: 370 DLHVAAKHTGDKP-----------YMCDDCGYRAVQRCTLSRHMRTHTGEKPYKCDHCDY 418
Query: 123 GAYQKEKLQFHVKNKHS 139
A K + H++ KH+
Sbjct: 419 TAAGKATVDNHIEVKHT 435
>gi|260787797|ref|XP_002588938.1| hypothetical protein BRAFLDRAFT_89128 [Branchiostoma floridae]
gi|229274110|gb|EEN44949.1| hypothetical protein BRAFLDRAFT_89128 [Branchiostoma floridae]
Length = 309
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ N L++H V+P + C CDY +
Sbjct: 219 HMRTHTGEKPYKCDQC-DYSAAHKNSLVQHVAK-HTGVKP------YKCDQCDYSAALKS 270
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H H GDK + C C Y A QK L H++
Sbjct: 271 TLKQHLAKHTGDKPYMCGECEYRATQKSHLAKHMRT 306
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T+ ++ H H GDK +KC C Y A K L+ H+
Sbjct: 1 MCGECGYRTVRKSDLSQHMRTHTGDKPYKCDQCDYSAAHKSTLKQHL 47
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 9/92 (9%)
Query: 46 NSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNM 102
V P C C + + L L H+ P +P + C C Y T +
Sbjct: 163 TGVKPYKCDQCDDSAAHKSTLKEHLALHTGQKPTGDKP------YKCGECGYRTAKKSSF 216
Query: 103 RNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+H H G+K +KC C Y A K L HV
Sbjct: 217 TDHMRTHTGEKPYKCDQCDYSAAHKNSLVQHV 248
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY ++ H +H G K + C C Y QK L H++
Sbjct: 28 YKCDQCDYSAAHKSTLKQHLALHTGQKPYMCGECGYSTVQKSHLSRHMRT 77
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 21/48 (43%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H H GDK +KC C Y A K L HV
Sbjct: 112 YMCGECGYRAAQKCTLSKHMRTHTGDKPYKCDQCDYSAAHKNSLVQHV 159
>gi|111550156|gb|ABH10100.1| BORIS transcription factor transcript variant C8 [Homo sapiens]
Length = 451
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 396
>gi|390462756|ref|XP_003732899.1| PREDICTED: transcriptional repressor CTCFL [Callithrix jacchus]
Length = 570
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 339 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 393
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 338 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 389
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H + KHS V
Sbjct: 390 SGEKPYECHVCHARFTQSGTMKMHTQQKHSENV 422
>gi|392933927|ref|NP_001255972.1| transcriptional repressor CTCFL isoform 3 [Homo sapiens]
gi|111550142|gb|ABH10093.1| BORIS transcription factor transcript variant B1 [Homo sapiens]
Length = 700
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 396
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|334312512|ref|XP_003339750.1| PREDICTED: transcriptional repressor CTCFL [Monodelphis domestica]
Length = 612
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F CCLC+Y + KL+ H++ K
Sbjct: 304 FKCTMCKYASVEASKLKRHIRSHTGERPFHCCLCNYASKDTYKLKRHMRTHSGEK 358
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H +R + F C C+Y + + ++ H H
Sbjct: 303 PFKCTMCK-YASVEASKLKRH-------IRSHTGERPFHCCLCNYASKDTYKLKRHMRTH 354
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 355 SGEKPYECYVCHARFTQSGTMKIHILQKHSENV 387
>gi|332031557|gb|EGI71029.1| Zinc finger protein 16 [Acromyrmex echinatior]
Length = 711
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
F C CDY T +R H + H G + +KC CSY A Q + H+K++H
Sbjct: 479 FSCEICDYKTGDHNTLRRHIMQHTGFRPYKCPHCSYSAIQSSSYKNHLKSRH 530
>gi|260804287|ref|XP_002597020.1| hypothetical protein BRAFLDRAFT_76512 [Branchiostoma floridae]
gi|229282281|gb|EEN53032.1| hypothetical protein BRAFLDRAFT_76512 [Branchiostoma floridae]
Length = 556
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 20/114 (17%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCM-----------------VRP 80
+M + P C C + NL L HS+ P M +R
Sbjct: 134 HMRTHTGIKPYKCDQCDYSAAQKSNLDSHLANHSDEKPFMCEECGFRTAHRRHLSRHMRT 193
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ ++C C+Y TI ++ H H G+ +KC C Y A QK L+ H+
Sbjct: 194 HTAEKPYMCGECEYKTIQKCDLSRHMRTHTGENLYKCGQCDYSAAQKSTLESHL 247
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 23/117 (19%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSS-----DVNLLMEHSENCPCM-----------------V 78
+M + P C C +++++ D +L EHS++ P M +
Sbjct: 274 HMRIHTGIKPHECDKC-DYSAAHKSNLDRHLRAEHSDDKPFMCGECGFRAAHRRHLSGHM 332
Query: 79 RPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
R + + C CDY ++ H H GDK + C C Y A QK L H++
Sbjct: 333 RSHTAEKPYKCDQCDYSAARKHHLDIHVAKHTGDKPYMCGECEYKATQKSDLSRHMR 389
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 76 CMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C + + +++CV C Y T ++ H H G+K +KC C Y A K L+ H+
Sbjct: 49 CQLEAQTNERRYVCVDCGYRTANKNDLSRHIRKHTGEKPYKCDQCDYSATLKANLERHL 107
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
+ +++ N L H +R + + C CDY + N+ H L H GDK + C
Sbjct: 66 GYRTANKNDLSRH-------IRKHTGEKPYKCDQCDYSATLKANLERHLLQHTGDKPYMC 118
Query: 118 CLCSYGAYQKEKLQFHVKN 136
C + Q+ L H++
Sbjct: 119 GECGHRTTQQSALAIHMRT 137
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSS-----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
+M + P C C +++++ D +L EHS++ P F+C C +
Sbjct: 443 HMRTHTGIKPYECDKC-DYSAAHKSNLDRHLRAEHSDDKP-----------FMCGECGFR 490
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+++ H H +K +KC C Y A +K L HV
Sbjct: 491 AAHRRHLSGHMRSHTAEKPYKCDQCDYSAARKHHLDIHV 529
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M S P C C ++ L L++H+ P ++C C Y T
Sbjct: 387 HMRIHTSEKPYKCGQCDYSSAQKSTLESHLLKHTGEKP-----------YMCGECGYRTT 435
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H H G K ++C C Y A K L H++ +HS
Sbjct: 436 KKSTLTQHMRTHTGIKPYECDKCDYSAAHKSNLDRHLRAEHS 477
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H IH G K +C C Y A K L H++ +HS
Sbjct: 256 YMCGECGYRTTKKSTLTQHMRIHTGIKPHECDKCDYSAAHKSNLDRHLRAEHS 308
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C+Y ++ H IH +K +KC C Y + QK L+ H+
Sbjct: 369 YMCGECEYKATQKSDLSRHMRIHTSEKPYKCGQCDYSSAQKSTLESHL 416
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + NL L++H+ + P ++C C + T + H
Sbjct: 87 PYKCDQCDYSATLKANLERHLLQHTGDKP-----------YMCGECGHRTTQQSALAIHM 135
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
H G K +KC C Y A QK L H+ N
Sbjct: 136 RTHTGIKPYKCDQCDYSAAQKSNLDSHLAN 165
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + +H L H G+K + C C Y +K L H++
Sbjct: 228 YKCGQCDYSAAQKSTLESHLLKHTGEKSYMCGECGYRTTKKSTLTQHMR 276
>gi|195110073|ref|XP_001999606.1| GI22984 [Drosophila mojavensis]
gi|193916200|gb|EDW15067.1| GI22984 [Drosophila mojavensis]
Length = 559
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 17/120 (14%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM-------------VRPDP 82
C+ C M+F NS P C+H ++ S L + +++ M V+P
Sbjct: 304 CKYC-GMAFRNS--PSRCRHERSPAVSSA-LPSQLAQDKDSMAGKRQYRKSKVNNVKPPA 359
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
FIC C + + +N+ H L H G+K F+C C Y K LQ H++ KH ++
Sbjct: 360 NPKVFICDLCGHQSSSPKNLDIHILRHKGEKNFECAECGIKHYSKYLLQLHIRVKHQGEM 419
>gi|17530013|gb|AAL40670.1| zinc finger protein ZFY [Rhinoceros unicornis]
Length = 116
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C +R H I
Sbjct: 28 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELRKHMRI 76
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 77 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 110
>gi|20805280|gb|AAM28645.1|AF336042_1 nuclear DNA binding factor [Homo sapiens]
gi|111550136|gb|ABH10090.1| BORIS transcription factor transcript variant A1 [Homo sapiens]
gi|111550138|gb|ABH10091.1| BORIS transcription factor transcript variant A2 [Homo sapiens]
gi|111550140|gb|ABH10092.1| BORIS transcription factor transcript variant C1 [Homo sapiens]
gi|119595924|gb|EAW75518.1| CCCTC-binding factor (zinc finger protein)-like, isoform CRA_c
[Homo sapiens]
gi|120660394|gb|AAI30487.1| CCCTC-binding factor (zinc finger protein)-like [Homo sapiens]
gi|193785568|dbj|BAG54626.1| unnamed protein product [Homo sapiens]
Length = 663
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|29570785|ref|NP_542185.2| transcriptional repressor CTCFL isoform 1 [Homo sapiens]
gi|392933920|ref|NP_001255969.1| transcriptional repressor CTCFL isoform 1 [Homo sapiens]
gi|392933923|ref|NP_001255970.1| transcriptional repressor CTCFL isoform 1 [Homo sapiens]
gi|313104098|sp|Q8NI51.2|CTCFL_HUMAN RecName: Full=Transcriptional repressor CTCFL; AltName:
Full=Brother of the regulator of imprinted sites;
AltName: Full=CCCTC-binding factor; AltName: Full=CTCF
paralog; AltName: Full=CTCF-like protein; AltName:
Full=Cancer/testis antigen 27; Short=CT27; AltName:
Full=Zinc finger protein CTCF-T
Length = 663
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|27762109|gb|AAL61541.1| zinc finger protein CTCF-T [Homo sapiens]
Length = 662
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRT 391
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|410055358|ref|XP_003953830.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 627
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 396
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|392933933|ref|NP_001255975.1| transcriptional repressor CTCFL isoform 6 [Homo sapiens]
Length = 613
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
>gi|82882230|gb|ABB92839.1| BORIS-like protein [Homo sapiens]
gi|111550144|gb|ABH10094.1| BORIS transcription factor transcript variant A3 [Homo sapiens]
Length = 613
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
>gi|410055364|ref|XP_003953833.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 422
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 137 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 191
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 136 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 187
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 188 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 220
>gi|348555802|ref|XP_003463712.1| PREDICTED: transcriptional repressor CTCFL-like [Cavia porcellus]
Length = 636
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 337 FKCSMCTYASVEASKLKRHVRSHTGERPFQCLLCSYASKDTYKLKRHMRTHSGEK 391
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + S + + L H VR + F C+ C Y + + ++ H H
Sbjct: 336 PFKCSMC-TYASVEASKLKRH-------VRSHTGERPFQCLLCSYASKDTYKLKRHMRTH 387
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q+ ++ H+ KHS V
Sbjct: 388 SGEKPYECQVCHARFTQRGTMKIHILQKHSENV 420
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 41 NMSFLNSVIPQSCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDY-FTII 98
+M +S P C C K F + V LL H N RP + CV CD F
Sbjct: 270 HMRIHSSEKPHMCHICLKTFRT--VTLLRNHI-NTHTGTRP------YKCVDCDMAFVTS 320
Query: 99 SQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ +R+ H +K FKC +C+Y + + KL+ HV++
Sbjct: 321 GELVRHRRYKHTHEKPFKCSMCTYASVEASKLKRHVRS 358
>gi|119595922|gb|EAW75516.1| CCCTC-binding factor (zinc finger protein)-like, isoform CRA_a
[Homo sapiens]
Length = 662
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|410055354|ref|XP_003953828.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 700
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 396
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|392933925|ref|NP_001255971.1| transcriptional repressor CTCFL isoform 2 [Homo sapiens]
Length = 662
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|260806364|ref|XP_002598054.1| hypothetical protein BRAFLDRAFT_62602 [Branchiostoma floridae]
gi|229283325|gb|EEN54066.1| hypothetical protein BRAFLDRAFT_62602 [Branchiostoma floridae]
Length = 713
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
++S + + P C C F+++ + L +H +R + + C CD+ +
Sbjct: 566 SVSRKSYLKPYKCGEC-GFSTTRKSTLYQH-------IRTHTGEKPYRCDQCDFSAAVKV 617
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
N+ H H GDK + C C Y A Q+ L H++
Sbjct: 618 NLVTHQTTHTGDKPYMCGECGYRAAQRSTLSKHMRT 653
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + H H G+K +KC C Y QK L +H+ KH+
Sbjct: 632 YMCGECGYRAAQRSTLSKHMRTHTGEKPYKCDQCEYSTAQKVNLDYHIAAKHT 684
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++ + L++H +R + ++C C Y T+ + H H
Sbjct: 248 PYMCDQC-DYSTAHKSDLVKH-------IRKHTGEKPYMCGECGYRTVQKSELSQHMRTH 299
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y A +K L H + KH+
Sbjct: 300 TGEKPYKCGQCDYSAARKHSLDRH-RTKHT 328
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T ++ H IH G+K +KC C Y A K H+
Sbjct: 333 FMCGECGYRTARKSDLSEHMRIHTGEKPYKCDQCDYSAASKSNFNKHL 380
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 87 FICVACDYFTI-ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CDY + +S++MR HT G+K +KC C Y A QK L+ H+
Sbjct: 417 FKCEQCDYSSFDLSKHMRTHT----GEKPYKCDQCDYSASQKPHLELHM 461
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRP---DPVKYK----FICVACD 93
+M P C C +++++ + L EH +P + K+ F+C C
Sbjct: 112 HMRTHTGEKPYKCDQC-DYSAARKSTLDEHRATTHTDEKPYMCEKSKHTGEKPFMCGKCG 170
Query: 94 YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ T + H H G+K + C C Y A QK + H+ KH+
Sbjct: 171 FKTARKTYLSRHMRTHTGEKPYMCGQCDYSAAQKVHVDSHIAAKHT 216
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + + H H G+K +KC C Y A +K L H H+
Sbjct: 94 YMCGECGYRSAQKSTLSQHMRTHTGEKPYKCDQCDYSAARKSTLDEHRATTHT 146
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CD+ N+ H H GDK + C C Y QK L H++
Sbjct: 502 FKCELCDFAAAEKGNLVTHQATHTGDKPYMCEKCGYRTAQKSALSSHMR 550
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T + H H G+K FKC LC + A +K L H
Sbjct: 474 YMCGECGYRTARKFTLARHMRTHTGEKPFKCELCDFAAAEKGNLVTH 520
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T + H L H G+K +KC C Y A +K L H + KH+
Sbjct: 38 YMCGECGFRTTTKSKLSIHLLTHTGEKPYKCDKCDYSATRKSTLDQH-RTKHT 89
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + H H GDK + C C Y + QK L H++
Sbjct: 66 YKCDKCDYSATRKSTLDQHRTKHTGDKPYMCGECGYRSAQKSTLSQHMRT 115
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEK-LQFHVKNK 137
++C C Y T ++ H IH+G K FKC C Y ++ K ++ H K
Sbjct: 389 YMCGECGYRTAWKSDLAKHMKIHMGQKPFKCEQCDYSSFDLSKHMRTHTGEK 440
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y T + ++ H H GDK + C C Y K L H++
Sbjct: 221 YMCGECGYRTAFNGSLSRHMRTHTGDKPYMCDQCDYSTAHKSDLVKHIRK 270
>gi|260781332|ref|XP_002585771.1| hypothetical protein BRAFLDRAFT_257357 [Branchiostoma floridae]
gi|229270812|gb|EEN41782.1| hypothetical protein BRAFLDRAFT_257357 [Branchiostoma floridae]
Length = 655
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C+Y T ++ H H G K +KC C Y A QK L H+ N
Sbjct: 56 YMCGECEYRTAHKSDLSRHMRTHTGQKPYKCDQCDYSAAQKSDLDRHITN 105
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + L L +H++N P ++C C Y T
Sbjct: 444 HMRTHTGEKPYKCDQCDYSAAQKSTLDQHLAKHTDNKP-----------YMCEECGYRTA 492
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC C Y A QK +L H+
Sbjct: 493 KKSHLSKHMRTHTGEKPYKCDQCDYSAAQKYQLDLHL 529
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + +L L +H+ + P M +P + C CDY T
Sbjct: 355 HMRTHTGEKPYKCDQCDYSATQKFHLDLHLAKHTSDKPYMEKP------YKCDQCDYATA 408
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H L H G+ + C C Y A Q L H++
Sbjct: 409 RKSHLDKHLLKHTGENPYMCGECGYRAVQMSNLSRHMRT 447
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C T+ +L L++H+ P ++C C Y + N+ H
Sbjct: 397 PYKCDQCDYATARKSHLDKHLLKHTGENP-----------YMCGECGYRAVQMSNLSRHM 445
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K +KC C Y A QK L H+
Sbjct: 446 RTHTGEKPYKCDQCDYSAAQKSTLDQHL 473
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T ++ H H G+K +KC C Y A QK L H+ S K
Sbjct: 337 YMCGECGYRTAHKSDLSRHMRTHTGEKPYKCDQCDYSATQKFHLDLHLAKHTSDK 391
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T ++ H H G+K +KC C Y A QK L H+
Sbjct: 567 MCGECGYRTARKFDLSRHMRTHTGEKPYKCDRCDYSAAQKRDLDRHI 613
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G++ +KC C Y A QK L H+
Sbjct: 141 YMCGECGYRTARKSTLSKHMRTHTGERPYKCDQCDYSAAQKPTLDSHL 188
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CD+ T N+ H H GDK + C C Y +K L H++
Sbjct: 113 YKCDQCDFATARKSNLDRHQTKHTGDKPYMCGECGYRTARKSTLSKHMRT 162
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C +L L +H+ + P ++C CDY
Sbjct: 215 HMRTHTGEKPYKCDQCDYSAGRQTSLDIHLAKHTGDKP-----------YMCDQCDYVAA 263
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ H H GDK + C C Y A +K L H++
Sbjct: 264 QKWDWDKHRTKHTGDKPYMCGECGYRAARKSTLSKHMRT 302
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H G+K +KC C Y A ++ L H+
Sbjct: 197 YMCRECGYRTARKFNLSLHMRTHTGEKPYKCDQCDYSAGRQTSLDIHL 244
>gi|111550174|gb|ABH10110.1| BORIS transcription factor transcript variant B6 [Homo sapiens]
gi|111550178|gb|ABH10111.1| BORIS transcription factor transcript variant B7 [Homo sapiens]
Length = 164
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ HS K
Sbjct: 80 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRT-HSGK 133
>gi|392933941|ref|NP_001255979.1| transcriptional repressor CTCFL isoform 10 [Homo sapiens]
gi|111550172|gb|ABH10108.1| BORIS transcription factor transcript variant B4 [Homo sapiens]
Length = 422
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 137 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 191
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 136 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 187
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 188 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 220
>gi|449686063|ref|XP_004211058.1| PREDICTED: zinc finger protein 665-like [Hydra magnipapillata]
Length = 316
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C + N++ H LIHLGDK+ KC +C G +K+ L H+K
Sbjct: 231 FPCSECTKTFTVWHNLKKHMLIHLGDKKHKCNVCHKGFVRKDHLNSHMK 279
>gi|443722643|gb|ELU11404.1| hypothetical protein CAPTEDRAFT_221739 [Capitella teleta]
Length = 858
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 51 QSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
Q C + +S V L H+ +CP ++C C I+ +++ H + H
Sbjct: 372 QICPYASRNSSQLVIHLRTHTGDCP-----------YVCYVCSAKFKINSDLKRHAMQHT 420
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
G+K F C C Y A K L+ H++ KH
Sbjct: 421 GEKPFACTYCDYRATLKCNLRSHIRQKH 448
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 83 VKYKFICV--ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
K KF C C+Y T +++ HT H G+K FKC LC +++KL+ H++
Sbjct: 279 AKRKFQCTYEGCNYSTNYHKDLDRHTRTHTGEKPFKCQLCEKMFNRQDKLRLHLRGHQGL 338
Query: 141 K 141
K
Sbjct: 339 K 339
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 52 SCKHCKNFTSSDVNLLMEH--SENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
+C+ C F +S ++ EH S N M+ C C Y T ++ H +H
Sbjct: 455 TCESCP-FETSSQRVMKEHMKSHNSQSMLH---------CAQCRYTTSNFSQLKCHLRVH 504
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
++ FKC C + + Q + H++ KH K K
Sbjct: 505 SNERPFKCTYCPFRSKQNNNVTSHMRRKHPAKFK 538
>gi|402882169|ref|XP_003904623.1| PREDICTED: transcriptional repressor CTCFL isoform 4 [Papio anubis]
Length = 666
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 346 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 400
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 345 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 396
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 397 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 429
>gi|391338634|ref|XP_003743662.1| PREDICTED: zinc finger protein 513-like [Metaseiulus occidentalis]
Length = 166
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
VK F C C + + ++ NH LIH G++ C C Y A +K L+ H++ KH
Sbjct: 107 VKKPFQCPFCPFNAYMRSHLGNHLLIHTGERPQPCPKCPYRAREKTALKRHLRAKHG 163
>gi|291409286|ref|XP_002720939.1| PREDICTED: zinc finger protein 64 [Oryctolagus cuniculus]
Length = 647
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 50 PQSCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
P C C K F+ D ++ C V+P + C ACDY S ++ H I
Sbjct: 137 PHKCDVCGKCFSRKDK---LKTHMRCHTGVKP------YKCRACDYAAADSSSLNKHLRI 187
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
H ++ FKC LC Y + +L H+++
Sbjct: 188 HSDERPFKCQLCPYASRNSSQLTVHLRS 215
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C HC +F L +HS R ++ C C Y +R H IH +
Sbjct: 280 CPHC-DFAGDSKATLRKHS-------RVHQAEHPEKCAECSYSCSSKAALRVHERIHCAE 331
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ FKC CS+ Q L HVK H+
Sbjct: 332 RPFKCSHCSFDTKQPSNLSKHVKKFHA 358
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C C IS +++ H +H G+K FKC C K L+ HV+ KHS
Sbjct: 222 FQCWLCSAKFKISSDLKRHMRVHSGEKPFKCEFCDVRCTMKGNLKSHVRIKHS 274
>gi|260815951|ref|XP_002602736.1| hypothetical protein BRAFLDRAFT_72903 [Branchiostoma floridae]
gi|229288047|gb|EEN58748.1| hypothetical protein BRAFLDRAFT_72903 [Branchiostoma floridae]
Length = 662
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLL----MEHSENCPCMVRPDPVKYKFICVACDYFT 96
+M P C C +++++ +LL +HS + P F+C C Y T
Sbjct: 334 HMRTHTGEKPYKCDQC-DYSAAQKSLLDHHLAKHSGDKP-----------FMCGECGYRT 381
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ + H H G+K +KC C Y A QK L H+
Sbjct: 382 TLMSTLSTHMRTHTGEKPYKCDQCDYSAAQKHHLDIHL 419
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
C +M P C C +++++ + L H + K ++C C Y
Sbjct: 497 CDLSKHMRTHTGEKPYKCDQC-DYSAAQKSTLDSH-------LATHSGKKPYMCGECGYR 548
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
T + + H IH G+K +KC C Y A QK L H+
Sbjct: 549 TTEKRYLSRHIRIHTGEKPYKCDRCDYSAAQKSTLDRHL 587
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C S NL + +H+ + P F+C C Y T
Sbjct: 278 HMRIHTGEKPYKCDQCDYSASRKRNLDIHVAKHTGDKP-----------FMCGECGYRTT 326
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H G+K +KC C Y A QK L H+ KHS
Sbjct: 327 QKYDLSIHMRTHTGEKPYKCDQCDYSAAQKSLLDHHL-AKHS 367
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F+C C+Y T ++ H H G+K +KC C Y A QK L H+ HS K
Sbjct: 484 FMCGECEYRTTQECDLSKHMRTHTGEKPYKCDQCDYSAAQKSTLDSHLAT-HSGK 537
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T ++ H IH G+K +KC C Y A +K H+
Sbjct: 428 FMCGECGYRTTQKYDLSRHMRIHTGEKPYKCDQCDYSAARKHHFDIHL 475
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H GDK +KC C Y A QK L H+
Sbjct: 206 YMCGECGYRTSQKSYLSRHMRTHTGDKPYKCDQCDYSAAQKSNLDRHL 253
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 15/96 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + L L++HS P ++C C Y T + + H
Sbjct: 567 PYKCDRCDYSAAQKSTLDRHLLKHSSEKP-----------YLCEECGYRTADRRCLYRHK 615
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
IH+G+K + C C Y A QK L H++ H++K
Sbjct: 616 RIHIGEKPYVCVECGYRATQKSALSKHMRT-HTSKA 650
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
++C C Y T ++ H H G+K +KC C Y A K L+ H+ KH+T
Sbjct: 38 YMCGECGYRTARKSHLSQHMRTHTGEKPYKCDQCDYSASTKGNLERHLP-KHTT 90
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 14/101 (13%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVAC 92
C +M + P C C+ + ++L L H+ + P ++C C
Sbjct: 107 CHLSQHMRTHTTEKPFKCDQCEYSATHKLSLDQHLARHTGDKP-----------YMCGEC 155
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
Y T ++ H H GDK +KC C Y A K L H
Sbjct: 156 GYRTAQKSDLSRHMRTHTGDKPYKCDQCDYSAAVKSTLDRH 196
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + + H H GDK + C C Y QK L H++
Sbjct: 178 YKCDQCDYSAAVKSTLDRHQAKHTGDKPYMCGECGYRTSQKSYLSRHMRT 227
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P CK C + S L +H +R + F C C+Y ++ H H
Sbjct: 93 PHMCKEC-GYRSKQKCHLSQH-------MRTHTTEKPFKCDQCEYSATHKLSLDQHLARH 144
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
GDK + C C Y QK L H++
Sbjct: 145 TGDKPYMCGECGYRTAQKSDLSRHMRT 171
>gi|260806384|ref|XP_002598064.1| hypothetical protein BRAFLDRAFT_85721 [Branchiostoma floridae]
gi|229283335|gb|EEN54076.1| hypothetical protein BRAFLDRAFT_85721 [Branchiostoma floridae]
Length = 311
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 14/102 (13%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLME---HSENCPCMVRPDPVKYKFICVACDYFTI 97
+M + P C C + VNL + H+ + P ++C C Y
Sbjct: 135 HMRIHSDEKPYKCDQCDYSATRKVNLGIHQTTHTGDKP-----------YMCGECGYRAA 183
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H H G+K +KC C Y A QK L +H+ KH+
Sbjct: 184 TRCTLSKHMRTHTGEKPYKCEQCDYSAAQKPHLDYHMAAKHT 225
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T + H H G+K KC C Y A QK L H+
Sbjct: 230 FMCGECGYRTAQKSTLSQHMRTHTGEKPHKCDQCDYSATQKSSLNKHL 277
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T ++ H IH +K +KC C Y A +K L H
Sbjct: 117 YMCGECGYRTARKSDLSKHMRIHSDEKPYKCDQCDYSATRKVNLGIH 163
>gi|260813390|ref|XP_002601401.1| hypothetical protein BRAFLDRAFT_103418 [Branchiostoma floridae]
gi|229286696|gb|EEN57413.1| hypothetical protein BRAFLDRAFT_103418 [Branchiostoma floridae]
Length = 331
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C+Y T+ ++ H H G+K +KC C Y A QK +L+ H+
Sbjct: 112 YMCGECEYRTVKKSHLSRHMRTHTGEKPYKCDQCDYSAAQKGELKKHL 159
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y TI N+ H H G+K +KC C Y +K KL H +
Sbjct: 168 YMCGECGYRTIRKDNLSLHMRNHTGEKLYKCDQCDYSFAEKSKLGRHRR 216
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
+ C CDY ++ H H G+K + C C Y +K+ L H++N K+
Sbjct: 140 YKCDQCDYSAAQKGELKKHLAKHTGEKPYMCGECGYRTIRKDNLSLHMRNHTGEKL 195
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY ++ H H GDK ++C C Y A +K L H+
Sbjct: 56 YKCDQCDYSAAQKSDLSKHMRTHTGDKPYRCDQCDYSAARKFSLDQHL 103
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ CV C++ ++ H H D+ +KC C Y A QK L H++
Sbjct: 28 YKCVECEHRAAQKSDLSRHMRTHTKDRPYKCDQCDYSAAQKSDLSKHMR 76
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + ++ H H G+K +KC C Y A K L H+
Sbjct: 280 YMCWECGYRVAQNSDLSRHMRSHTGEKPYKCDQCDYSAAHKPSLDHHL 327
>gi|332858736|ref|XP_514743.3| PREDICTED: transcriptional repressor CTCFL isoform 3 [Pan
troglodytes]
gi|332858738|ref|XP_003339394.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
gi|332858740|ref|XP_003317049.1| PREDICTED: transcriptional repressor CTCFL isoform 1 [Pan
troglodytes]
Length = 663
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|270002410|gb|EEZ98857.1| hypothetical protein TcasGA2_TC004467 [Tribolium castaneum]
Length = 567
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C +C + +++++ H LIHL K + C +C+ +K+ L HVKN H K
Sbjct: 294 FECTSCSRAFVNNKDLQRHQLIHLETKAYNCSICNTSFRRKDNLYRHVKNTHPGK 348
>gi|260823002|ref|XP_002603972.1| hypothetical protein BRAFLDRAFT_71740 [Branchiostoma floridae]
gi|229289297|gb|EEN59983.1| hypothetical protein BRAFLDRAFT_71740 [Branchiostoma floridae]
Length = 512
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 14/96 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C S +L LM+HS P ++C C Y
Sbjct: 253 HMRTHTGEKPYKCDQCDYSASEKGHLNQHLMKHSGEKP-----------YMCGECGYRAA 301
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++ H IH G+K +KC C Y A QK +L H
Sbjct: 302 RKSHLSKHIRIHTGEKPYKCDQCDYSAAQKSQLNKH 337
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T ++ H IH G+K +KC C Y A K L H
Sbjct: 347 YMCGECGYRTAYKSDLSKHMRIHTGEKPYKCDQCDYSAALKSTLAQH 393
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T +++ H H G+K +KC C Y A +K L H+
Sbjct: 235 YMCGECGFRTTYKESLSRHMRTHTGEKPYKCDQCDYSASEKGHLNQHL 282
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G++ +KC C Y A K L H+
Sbjct: 179 YMCGECGYRTAYKSGLSRHMRTHTGERPYKCDQCDYSAAHKSTLDEHL 226
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
VR + ++C C Y + H H G+K +KC C Y QK+ L H +++
Sbjct: 450 VRKHTGEKPYMCGECGYRAAQRSTLSRHMRTHTGEKPYKCDQCDYSTTQKQHLINH-QSR 508
Query: 138 HSTK 141
HS++
Sbjct: 509 HSSE 512
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
K + C CDY ++ H H G+K + C C Y A Q+ L H++
Sbjct: 428 KKPYRCDQCDYSAAKKFDLDKHVRKHTGEKPYMCGECGYRAAQRSTLSRHMR 479
>gi|160960122|emb|CAO02414.1| Y-linked zinc finger protein [Ailuropoda melanoleuca]
Length = 132
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C +R H I
Sbjct: 41 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELRKHMRI 89
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 90 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 123
>gi|426392246|ref|XP_004062467.1| PREDICTED: transcriptional repressor CTCFL isoform 3 [Gorilla
gorilla gorilla]
Length = 627
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 396
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|417413400|gb|JAA53029.1| Putative ovo, partial [Desmodus rotundus]
Length = 1056
Score = 42.4 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C C F + + H H G+K +KC C Y A QK L++H++ H K D
Sbjct: 482 CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCDYAAAQKTSLRYHLERHHKDKQAD 537
>gi|397469120|ref|XP_003806212.1| PREDICTED: transcriptional repressor CTCFL isoform 1 [Pan paniscus]
Length = 656
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|348541407|ref|XP_003458178.1| PREDICTED: zinc finger protein 84-like [Oreochromis niloticus]
Length = 521
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P +C HC +++S L++H +R + + C C Y +I ++ H H
Sbjct: 403 PFTCPHC-SYSSRLKASLLQH-------LRTHTGEKPYRCAECPYASIDRSSLLRHCRTH 454
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+K ++C C Y + QK+ L H + H+
Sbjct: 455 SQEKPYRCQHCDYSSIQKKSLDLHARRHHT 484
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + S D + L+ H C Y+ C CDY +I +++ H H
Sbjct: 431 PYRCAECP-YASIDRSSLLRH-----CRTHSQEKPYR--CQHCDYSSIQKKSLDLHARRH 482
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ F C C Y + ++ L HV+ H+
Sbjct: 483 HTGEAFPCQQCDYSSPDRQLLLRHVRRHHA 512
>gi|332207881|ref|XP_003253024.1| PREDICTED: transcriptional repressor CTCFL isoform 2 [Nomascus
leucogenys]
Length = 640
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 326 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 374
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 325 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 376
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 377 SGEKPYECHICHARFTQNGTMKTHILQKHSENV 409
>gi|109091564|ref|XP_001089797.1| PREDICTED: transcriptional repressor CTCFL [Macaca mulatta]
gi|355563006|gb|EHH19568.1| hypothetical protein EGK_02262 [Macaca mulatta]
Length = 667
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 346 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 400
Score = 35.0 bits (79), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 345 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 396
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 397 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 429
>gi|443706544|gb|ELU02533.1| hypothetical protein CAPTEDRAFT_134015, partial [Capitella teleta]
Length = 136
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ +F+C C+ ++ H IH G+K F C +C+Y + +K+ L HVK H
Sbjct: 78 IDRRFVCTICEKGFTAKTSLARHLRIHTGEKPFTCPVCAYASNKKDNLMRHVKAIH 133
>gi|260823140|ref|XP_002604041.1| hypothetical protein BRAFLDRAFT_71669 [Branchiostoma floridae]
gi|229289366|gb|EEN60052.1| hypothetical protein BRAFLDRAFT_71669 [Branchiostoma floridae]
Length = 546
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ L +H +R + ++C C Y
Sbjct: 454 HMRTHTGERPYKCDQC-DYSAAQKCALAQH-------MRKHTGEKPYMCGVCGYRAAKMS 505
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+ +H H+G+K +KC +C+Y A +K +L H+K
Sbjct: 506 NVSDHMRAHIGEKHYKCDMCNYSAARKSQLFGHLK 540
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y + ++ H H G+K FKC C Y A QK + H+ KHS
Sbjct: 323 FMCGECGYRSAHKCHLSEHMKTHTGEKPFKCDQCDYSAAQKTHMDRHIVAKHS 375
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 60 TSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL 119
T D +++ +HS+ P +IC C Y T ++ H IH G+K +KC
Sbjct: 364 THMDRHIVAKHSDEKP-----------YICGECGYRTTQKAHLSQHMRIHTGEKPYKCNQ 412
Query: 120 CSYGAYQKEKLQFHV 134
C Y K L H+
Sbjct: 413 CDYTVAHKSSLNDHM 427
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y ++ H H G+K FKC C + A QK L H KH+
Sbjct: 85 YMCGECGYRAAQKHHLSRHMRTHTGEKPFKCDQCDFSAAQKSTLDNHTVAKHN 137
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++C C Y T N+ H IH +K +KC C+Y A ++ KL H+ KV
Sbjct: 198 YMCEVCGYRTAQKFNLSRHMRIHTEEKPYKCDQCNYSASERSKLDKHLPKHTGKKV 253
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T N+ H H G++ +KC C Y A QK L H++
Sbjct: 436 YKCGECGYRTAKKANLFRHMRTHTGERPYKCDQCDYSAAQKCALAQHMR 484
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T ++ H IH G+K F C C Y + K L H+K
Sbjct: 295 YLCGECGYRTAKKDHLTEHLKIHTGEKPFMCGECGYRSAHKCHLSEHMK 343
>gi|260783168|ref|XP_002586649.1| hypothetical protein BRAFLDRAFT_136436 [Branchiostoma floridae]
gi|229271770|gb|EEN42660.1| hypothetical protein BRAFLDRAFT_136436 [Branchiostoma floridae]
Length = 342
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+HC+ F ++ L H +P ++C C Y NM +H IH+G+
Sbjct: 65 CRHCE-FAATRRKALRAHMAK---HTKP------YMCGECGYRAAYKSNMASHMKIHIGE 114
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNK 137
K ++C C Y + KL H++ K
Sbjct: 115 KPYRCTRCCYATAESAKLSRHMRLK 139
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+HC+ F ++ L H +P ++C C Y NM +H IH+G+
Sbjct: 238 CRHCE-FAATRRKALRAHLAK---HTKP------YMCGECGYRAAYKSNMASHMKIHIGE 287
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNK 137
K ++C C Y + KL H++ K
Sbjct: 288 KPYRCSRCCYATAESGKLSRHMRLK 312
>gi|392933935|ref|NP_001255976.1| transcriptional repressor CTCFL isoform 7 [Homo sapiens]
gi|111550166|gb|ABH10105.1| BORIS transcription factor transcript variant A6 [Homo sapiens]
Length = 573
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRT 391
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|1663696|dbj|BAA12113.1| KIAA0198 [Homo sapiens]
Length = 562
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 52 SCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
SCK C + F S+ L+EH + V + K C CD +++R H ++H
Sbjct: 223 SCKVCLQTFESTQA--LLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHT 280
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G K F C C+ +K+ L HVK HS ++
Sbjct: 281 GRKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 312
>gi|402882163|ref|XP_003904620.1| PREDICTED: transcriptional repressor CTCFL isoform 1 [Papio anubis]
gi|402882165|ref|XP_003904621.1| PREDICTED: transcriptional repressor CTCFL isoform 2 [Papio anubis]
Length = 667
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 346 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 400
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 345 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 396
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 397 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 429
>gi|397469122|ref|XP_003806213.1| PREDICTED: transcriptional repressor CTCFL isoform 2 [Pan paniscus]
Length = 606
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
>gi|355784365|gb|EHH65216.1| hypothetical protein EGM_01946 [Macaca fascicularis]
Length = 667
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 346 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 400
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 345 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 396
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 397 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 429
>gi|260804271|ref|XP_002597012.1| hypothetical protein BRAFLDRAFT_76505 [Branchiostoma floridae]
gi|229282273|gb|EEN53024.1| hypothetical protein BRAFLDRAFT_76505 [Branchiostoma floridae]
Length = 565
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L +H+ + P ++C C Y T+
Sbjct: 39 HMRTHTGRKPYKCNQCDYSAAHKYNLGRHLAKHTGDKP-----------YMCGECGYRTV 87
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ +H IH G+K +KC C Y A +K L +H+
Sbjct: 88 QKSHLFDHMRIHTGEKPYKCDQCDYSASKKSILDYHL 124
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ +H H G+K +KC C Y A +K + +H+
Sbjct: 241 YMCGECGYRTAKKSHLSDHMRTHTGEKPYKCNQCDYSAAKKSHVDYHL 288
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
C C + NS + Q H + T ++ + S+ M R + + C CDY
Sbjct: 2 CGECGYRTAYNSNLSQ---HMRTHTGVKPDMTTQKSDLSEHM-RTHTGRKPYKCNQCDYS 57
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+ H H GDK + C C Y QK L H++
Sbjct: 58 AAHKYNLGRHLAKHTGDKPYMCGECGYRTVQKSHLFDHMR 97
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY + + H ++H G+K + C C Y Y+K L H+
Sbjct: 437 YKCDQCDYSAAQTSTLNQHLVMHTGEKPYMCGECGYRTYRKSHLSEHM 484
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H+G K FKC C Y A +K L H+
Sbjct: 353 YMCGECGYRTAYKSHLCRHMGTHIGQKLFKCEQCDYSAARKYHLDRHL 400
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY ++ H H G+K + C C Y A QK L H++
Sbjct: 381 FKCEQCDYSAARKYHLDRHLAKHTGEKPYMCEECGYRAAQKSHLSRHMRT 430
>gi|171474911|gb|ACB47396.1| brother of regulator of imprinted sites [Ornithorhynchus anatinus]
Length = 502
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C C Y ++ + ++ H H G++ F+C LCSY + KL+ H++
Sbjct: 193 FQCTICKYASVEASKLKRHIRSHTGERPFRCRLCSYASRDTYKLKRHMRT 242
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H +R + F C C Y + + ++ H H
Sbjct: 192 PFQCTICK-YASVEASKLKRH-------IRSHTGERPFRCRLCSYASRDTYKLKRHMRTH 243
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K ++C +C Q+ ++ H+ KH+
Sbjct: 244 SGEKPYECSVCQTKFTQRGTMKIHMLQKHT 273
>gi|426241223|ref|XP_004014491.1| PREDICTED: transcriptional repressor CTCFL [Ovis aries]
Length = 627
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 322 FKCSVCKYASVEASKLKRHIRSHTGERPFQCSLCSYASKDTYKLKRHMRTHSGEK 376
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H +R + F C C Y + + ++ H H
Sbjct: 321 PFKCSVCK-YASVEASKLKRH-------IRSHTGERPFQCSLCSYASKDTYKLKRHMRTH 372
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ HV KHS V
Sbjct: 373 SGEKPYECHICHARFTQSGTMKMHVLQKHSENV 405
>gi|260823028|ref|XP_002603985.1| hypothetical protein BRAFLDRAFT_71727 [Branchiostoma floridae]
gi|229289310|gb|EEN59996.1| hypothetical protein BRAFLDRAFT_71727 [Branchiostoma floridae]
Length = 402
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + N+ H H G+K +KC LC Y A K L H++ KHS
Sbjct: 66 YMCGECGYRTTVKCNLSKHMRTHTGEKPYKCDLCDYSAAHKLHLDQHLR-KHS 117
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 23/55 (41%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C CDY + H H GDK +KC C Y A QK L H+ K
Sbjct: 10 YKCDQCDYSATEKYTLVKHIRTHTGDKPYKCDQCDYSAAQKWNLDQHLSQHRGEK 64
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y + H H G+K +KC C Y A + L HVK
Sbjct: 178 YMCWECGYRAAKRSTLSQHVRTHTGEKPYKCDQCDYSAAHRFSLNLHVK 226
>gi|260806227|ref|XP_002597986.1| hypothetical protein BRAFLDRAFT_189883 [Branchiostoma floridae]
gi|229283256|gb|EEN53998.1| hypothetical protein BRAFLDRAFT_189883 [Branchiostoma floridae]
Length = 86
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 52 SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT-LIHL 110
SC HC+ T D LM RP F C CDY ++ H +H
Sbjct: 8 SCPHCEYET--DAKPLMTKHIRTHTGERP------FRCQQCDYSAAQKATLKQHVQAVHT 59
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHV 134
G++ ++C C Y A QK LQ H+
Sbjct: 60 GERPYRCGYCDYSAVQKGALQIHM 83
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C+Y T M H H G++ F+C C Y A QK L+ HV+ H+
Sbjct: 6 RHSCPHCEYETDAKPLMTKHIRTHTGERPFRCQQCDYSAAQKATLKQHVQAVHT 59
>gi|449680715|ref|XP_004209657.1| PREDICTED: gastrula zinc finger protein XlCGF57.1-like, partial
[Hydra magnipapillata]
Length = 265
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY N+ H IH G+K FKC C Y QK L H+K
Sbjct: 96 FKCTYCDYECTQKTNLTTHLKIHTGEKPFKCTYCDYECTQKSTLTTHLK 144
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY N+ H IH G+K FKC C Y QK L H+K
Sbjct: 152 FKCTYCDYECTQKTNLTTHLKIHTGEKPFKCTYCDYECTQKSTLTTHLK 200
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY I + H IH G+K FKC C Y QK L H+K
Sbjct: 68 FKCTYCDYECIQKSTLTTHLKIHTGEKPFKCTYCDYECTQKTNLTTHLK 116
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY + H IH G+K FKC C Y QK L H+K
Sbjct: 40 FKCTYCDYEFTQKSTLTTHLKIHTGEKPFKCTYCDYECIQKSTLTTHLK 88
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY N+ H IH G+K FKC C Y +K L H+K
Sbjct: 208 FKCTYCDYDCTRKTNLTRHVKIHTGEKPFKCTNCDYKCTRKTNLTTHLK 256
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY + H IH G+K FKC C Y QK L H+K
Sbjct: 124 FKCTYCDYECTQKSTLTTHLKIHTGEKPFKCTYCDYECTQKTNLTTHLK 172
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY + H IH G+K FKC C Y +K L HVK
Sbjct: 180 FKCTYCDYECTQKSTLTTHLKIHTGEKPFKCTYCDYDCTRKTNLTRHVK 228
>gi|260810937|ref|XP_002600179.1| hypothetical protein BRAFLDRAFT_66687 [Branchiostoma floridae]
gi|229285465|gb|EEN56191.1| hypothetical protein BRAFLDRAFT_66687 [Branchiostoma floridae]
Length = 511
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPD----PVKYK-FICVACDYFTIISQNMRNHTLIHLGD 112
N T + + SE P R + P+K +ICV CDY ++ H IH G+
Sbjct: 281 NSTQAGMEASSNLSEKAPPGYRDERVTKPLKGPPYICVECDYRAPNGFSLTEHVRIHTGE 340
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K +KC C + K + H++ KHS K
Sbjct: 341 KPYKCDQCDFSTAWKTSIDMHMR-KHSGK 368
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C F+++ + L EH V + K C C Y T + H H
Sbjct: 398 PYKCQLC-GFSTARKSNLSEH-------VATHTGEKKHKCNVCGYRTAHKHGLNRHMKTH 449
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
GD +KC C Y A QK L H+ +KH+
Sbjct: 450 TGDNPYKCGQCDYSAVQKRDLDVHM-SKHT 478
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+Y + C C + T N+ H H G+K+ KC +C Y K L H+K
Sbjct: 396 QYPYKCQLCGFSTARKSNLSEHVATHTGEKKHKCNVCGYRTAHKHGLNRHMK 447
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+R K ++C C Y T ++ H + H G +KC LC + +K L HV
Sbjct: 362 MRKHSGKKPYVCQECGYSTSYRVHLTRHMITHTGQYPYKCQLCGFSTARKSNLSEHV 418
>gi|260835600|ref|XP_002612796.1| hypothetical protein BRAFLDRAFT_233081 [Branchiostoma floridae]
gi|229298176|gb|EEN68805.1| hypothetical protein BRAFLDRAFT_233081 [Branchiostoma floridae]
Length = 396
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F+C C Y T H IH G+K +KC C Y A QK + H+ KH+ +
Sbjct: 5 FMCEDCGYRTFQKSRFSVHMRIHTGEKPYKCDQCDYSATQKPNMDKHIAAKHTGE 59
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T+ ++ H H G+K +KC LC Y A K L H+
Sbjct: 90 FMCGECGYRTVQKSDLSRHMRTHTGEKPYKCDLCDYSAALKSNLAQHL 137
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY NM H H G+K FKC C Y A QK L +H+
Sbjct: 33 YKCDQCDYSATQKPNMDKHIAAKHTGEKPFKCDQCDYSAVQKSHLDYHI 81
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY + ++ H H G+K F C C Y QK L H++
Sbjct: 62 FKCDQCDYSAVQKSHLDYHIATHSGNKPFMCGECGYRTVQKSDLSRHMR 110
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 7/95 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ P C C S + L H +R + + C CDY +
Sbjct: 220 HMAKHTGEKPYMCGGCGAGQDSSKSDLSRH-------MRTHTGEKPYKCDLCDYSAALKS 272
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+ H H G K + C C Y A K L H++
Sbjct: 273 NLAQHLAKHQGLKPYMCGECDYSARYKSALVIHIR 307
>gi|260835926|ref|XP_002612958.1| hypothetical protein BRAFLDRAFT_114219 [Branchiostoma floridae]
gi|229298340|gb|EEN68967.1| hypothetical protein BRAFLDRAFT_114219 [Branchiostoma floridae]
Length = 509
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C AC Y T+ + HT H G+KQ+KC C Y A K L H + KH+
Sbjct: 138 YMCGACGYRTVTKYKLSQHTRTHTGNKQYKCDQCDYSAKAKFTLDQH-RAKHT 189
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++ + L H N V+P + C C Y T
Sbjct: 18 HMRTHTGERPYKCDQC-DYSAGRKSTLDRHLAN-HAGVKP------YACGECGYRTAKKA 69
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H G+K ++C C Y A K L H+++KH+
Sbjct: 70 HLSQHMRSHTGEKPYRCDHCDYSATNKRTLCMHIQSKHT 108
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 19/109 (17%)
Query: 36 CQTCPNMSFLNSVI-----------PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVK 84
C+ CP ++L S + P C C ++++ + L++H +R +
Sbjct: 402 CKECPYSTYLKSDLSRHMRTHTGEKPYKCDQC-AYSAAVKSSLVKH-------LRTHTGE 453
Query: 85 YKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T + H H GDK ++C CSY A +K L H
Sbjct: 454 KPYMCGECGYRTAQMSCLSKHMRTHTGDKPYRCDQCSYSATRKSYLDKH 502
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C C Y T + ++ H H G+K +KC C+Y A K L H++
Sbjct: 400 FACKECPYSTYLKSDLSRHMRTHTGEKPYKCDQCAYSAAVKSSLVKHLRT 449
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C+Y T ++ +H H G+K +KC C Y A +K +L H+
Sbjct: 194 YMCGKCEYRTSHRGHLISHMNTHTGEKPYKCDRCDYSAARKSQLDIHL 241
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+C C Y T+ ++ H H G++ +KC C Y A +K L H+ N
Sbjct: 1 MCGECGYQTVRKDHILRHMRTHTGERPYKCDQCDYSAGRKSTLDRHLAN 49
>gi|260782545|ref|XP_002586346.1| hypothetical protein BRAFLDRAFT_62630 [Branchiostoma floridae]
gi|229271450|gb|EEN42357.1| hypothetical protein BRAFLDRAFT_62630 [Branchiostoma floridae]
Length = 449
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y T +N+ H IH G+K ++C C Y A +K L H+
Sbjct: 362 YICGECGYRTAERRNLIRHMKIHSGEKPYRCDQCDYAAVEKHSLDLHL 409
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T ++ H IH GDK +KC C Y A QK L H+
Sbjct: 306 FMCGECGYRTTQKCDLSKHMRIHTGDKPYKCDQCDYCAAQKSTLDRHL 353
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T ++ H H G+K +KC C Y A QK L H+
Sbjct: 145 YLCGECGHRTAQKCDLSKHMRTHTGEKLYKCDQCGYSAAQKSTLGRHL 192
>gi|443707025|gb|ELU02819.1| hypothetical protein CAPTEDRAFT_137609 [Capitella teleta]
Length = 432
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
K + C C++ + HTL HLG+K FKC C + +K L+FH++
Sbjct: 219 AKPNYKCDQCEFACFTKHEFKRHTLNHLGEKPFKCTECDFATVEKMNLKFHMRT 272
>gi|260823068|ref|XP_002604005.1| hypothetical protein BRAFLDRAFT_57769 [Branchiostoma floridae]
gi|229289330|gb|EEN60016.1| hypothetical protein BRAFLDRAFT_57769 [Branchiostoma floridae]
Length = 368
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M + P C C ++ NL L +H+ P ++C C Y T
Sbjct: 46 HMRTHSGEKPYKCDQCDYSAAAKSNLDSHLAKHTGEKP-----------YMCKECGYRTA 94
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K FKC C Y A +K L+ HV
Sbjct: 95 NKSHLSRHIRTHTGEKPFKCDQCDYSAARKSHLEQHV 131
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y T ++ H H GDK +KC C Y A QK L H+
Sbjct: 224 YICGECGYRTSYKVSLSRHLRTHTGDKPYKCDQCDYSAAQKGHLDQHL 271
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 20/106 (18%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCM-----------------VRPDPVKYKFIC 89
P C C + +L LM+HS + P M +R + + C
Sbjct: 251 PYKCDQCDYSAAQKGHLDQHLMKHSGDKPYMCGECGYRAALKSYLSKHMRTHTGEKPYKC 310
Query: 90 VACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
CDY + + H H GDK + C C Y QK L H++
Sbjct: 311 DQCDYSAAVKSTLDKHLAKHTGDKPYMCGECGYRVAQKSDLSRHIR 356
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P CK C + +++ + L H +R + F C CDY ++ H H
Sbjct: 83 PYMCKEC-GYRTANKSHLSRH-------IRTHTGEKPFKCDQCDYSAARKSHLEQHVAKH 134
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K + C +C Y +K L HV+
Sbjct: 135 TGEKPYMCEVCGYRTAKKSHLTEHVRT 161
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A K L H+
Sbjct: 28 YMCGECGYRTTTKSSLSKHMRTHSGEKPYKCDQCDYSAAAKSNLDSHL 75
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y T ++ H H G K +KC C Y A QK L H++
Sbjct: 140 YMCEVCGYRTAKKSHLTEHVRTHTGVKPYKCEECGYRAAQKTHLSRHMRT 189
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 14/104 (13%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVAC 92
C ++ P C C T++ +L + HS P + C C
Sbjct: 13 CHLAEHLRIHTGEKPYMCGECGYRTTTKSSLSKHMRTHSGEKP-----------YKCDQC 61
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
DY N+ +H H G+K + C C Y K L H++
Sbjct: 62 DYSAAAKSNLDSHLAKHTGEKPYMCKECGYRTANKSHLSRHIRT 105
>gi|260815971|ref|XP_002602746.1| hypothetical protein BRAFLDRAFT_233937 [Branchiostoma floridae]
gi|229288057|gb|EEN58758.1| hypothetical protein BRAFLDRAFT_233937 [Branchiostoma floridae]
Length = 473
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T ++ H IH GDK +KC C Y A QK L H+
Sbjct: 271 FMCGECGYRTTQKCDLSKHMRIHTGDKPYKCDQCDYSAAQKSTLDRHL 318
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T +N+ H IH G+K ++C C Y A +K L H+
Sbjct: 327 YMCGQCGYRTGDRRNLIRHMKIHSGEKPYRCDQCDYAAVEKHSLDLHL 374
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ ++ H H GDK + C C Y +K L H++
Sbjct: 411 YKCDQCDYSATLNSTLKQHLAKHTGDKPYMCGECGYRTARKSNLTKHIR 459
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H L H G+K + C C Y QK L H++
Sbjct: 131 YKCDQCDYSAAQKFNLNTHLLQHTGEKPYMCGECGYRTTQKSALSQHMR 179
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 14/89 (15%)
Query: 50 PQSCKHCKNFTSSDVNLLME---HSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C T NL+ HS P + C CDY + ++ H
Sbjct: 326 PYMCGQCGYRTGDRRNLIRHMKIHSGEKP-----------YRCDQCDYAAVEKHSLDLHL 374
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H GDK +KC C Y K L H++
Sbjct: 375 AKHTGDKPYKCGECGYRTANKSHLSQHMR 403
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T ++ H H G+K +KC C Y A QK L H+
Sbjct: 75 YLCGECGHRTAQKCDLSKHMRTHTGEKLYKCDQCGYSAAQKSTLGRHL 122
>gi|115361543|gb|ABI95862.1| Y-linked zinc finger protein [Ailuropoda melanoleuca]
Length = 148
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C +R H I
Sbjct: 49 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELRKHMRI 97
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 98 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 131
>gi|441638105|ref|XP_004090107.1| PREDICTED: transcriptional repressor CTCFL [Nomascus leucogenys]
Length = 714
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 363 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 417
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 362 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 413
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 414 SGEKPYECHICHARFTQNGTMKTHILQKHSENV 446
>gi|402882167|ref|XP_003904622.1| PREDICTED: transcriptional repressor CTCFL isoform 3 [Papio anubis]
Length = 617
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 346 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 394
>gi|301629401|ref|XP_002943829.1| PREDICTED: zinc finger protein 513-like [Xenopus (Silurana)
tropicalis]
Length = 546
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY N++ H IH GDK F+C LCSY Q L+ H+
Sbjct: 447 YKCQLCDYACGNLANLKRHGRIHSGDKPFRCGLCSYSCNQSMNLKRHM 494
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P F CV C + T ++ H H G+K +KC LC Y + + L+ H +
Sbjct: 384 PGSPGKGFSCVLCSFVTHYPNHLSRHMKTHSGEKPYKCQLCPYASAHYDNLKRHQR 439
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 19/110 (17%)
Query: 36 CQTCP-----------NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVK 84
CQ CP +M N P C HC ++ VNL +R +
Sbjct: 150 CQLCPFSTHYSSHLKRHMKTHNGEKPFRCPHCLYASAQLVNLKRH--------LRTHTGE 201
Query: 85 YKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C C + N++ H +H +K + C LC Y Q L+ H+
Sbjct: 202 KPFRCEHCGFSCSSPGNLKRHQRVHTQEKPYSCNLCPYRCNQSRNLKRHL 251
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y S N++ H L H G+K F+C C Y + + H K
Sbjct: 475 FRCGLCSYSCNQSMNLKRHMLRHTGEKPFRCAQCHYTTGHWDNYKRHQK 523
>gi|260823050|ref|XP_002603996.1| hypothetical protein BRAFLDRAFT_71715 [Branchiostoma floridae]
gi|229289321|gb|EEN60007.1| hypothetical protein BRAFLDRAFT_71715 [Branchiostoma floridae]
Length = 207
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+ C CDY + N+ +H H G+K FKC C Y A K KL+ H
Sbjct: 10 YKCDQCDYAAAVKHNLIDHQKTHSGEKPFKCDQCDYSAVDKSKLKQH 56
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C+ C +++++D + L +H V+ K ++C C Y T
Sbjct: 84 HMRSHTGEKPYKCEQC-DYSATDKSKLKQH------QVKHTSEK-PYMCGECGYGTAYRS 135
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
++ H H G+K +KC C Y A +K L
Sbjct: 136 HLSRHMRTHTGEKPYKCDQCDYSAAEKHHL 165
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY + ++ H + H G+K + C C Y + +K L H+++
Sbjct: 38 FKCDQCDYSAVDKSKLKQHQVKHTGEKPYMCGECGYRSAKKSDLSKHMRS 87
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y + ++ H H G+K +KC C Y A K KL+ H
Sbjct: 66 YMCGECGYRSAKKSDLSKHMRSHTGEKPYKCEQCDYSATDKSKLKQH 112
>gi|395752479|ref|XP_002830504.2| PREDICTED: transcriptional repressor CTCFL isoform 2 [Pongo abelii]
Length = 662
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
>gi|260807253|ref|XP_002598423.1| hypothetical protein BRAFLDRAFT_83207 [Branchiostoma floridae]
gi|229283696|gb|EEN54435.1| hypothetical protein BRAFLDRAFT_83207 [Branchiostoma floridae]
Length = 752
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+IC C Y T+ N+ H H G+K + C C Y A +K L H KH+++
Sbjct: 34 YICGECGYRTVRKTNLSRHMKSHTGEKPYNCDQCDYSAAEKAHLDQHRLAKHTSE 88
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C+Y T+ ++ H H G+K + C C Y A +K +L H+K
Sbjct: 232 YMCGECEYRTVRKSDLSIHMKTHTGEKPYICGECGYRATRKSQLSEHIKT 281
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C+Y T+ ++ H H G+K + C C Y A +K +L H+K
Sbjct: 345 YMCGECEYRTVRKSDLSIHMKTHTGEKPYICGECGYRATRKSQLSEHIKT 394
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F+C C Y + H H G+K FKC C Y A +K L H+K
Sbjct: 91 FVCEECGYKAARKSQLSEHIKTHTGEKPFKCEECGYRAGRKFDLSIHMKT 140
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+IC C Y + H H G+K FKC C Y A K L H++
Sbjct: 373 YICGECGYRATRKSQLSEHIKTHTGEKPFKCEECGYRAVNKSHLSRHMRT 422
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
F C C Y + ++ H H G++ +KC C Y A QK L H KH
Sbjct: 175 FKCEECGYRAVNKSHLSRHMRTHTGERPYKCDQCDYSAAQKSCLDDHRLAKH 226
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+IC C Y + H H G+K FKC C Y A K L H++
Sbjct: 147 YICGECGYRATRKSQLSIHIKTHTGEKPFKCEECGYRAVNKSHLSRHMRT 196
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C C Y + ++ H H G++ +KC C Y A QK L H KH
Sbjct: 288 YKCEECGYRAVNKSHLSRHMRTHTGERPYKCDQCDYSAAQKSCLDDHHLAKH 339
>gi|297707422|ref|XP_002830505.1| PREDICTED: transcriptional repressor CTCFL isoform 3 [Pongo abelii]
gi|395752477|ref|XP_003779430.1| PREDICTED: transcriptional repressor CTCFL [Pongo abelii]
Length = 663
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
>gi|260781009|ref|XP_002585621.1| hypothetical protein BRAFLDRAFT_63005 [Branchiostoma floridae]
gi|229270639|gb|EEN41632.1| hypothetical protein BRAFLDRAFT_63005 [Branchiostoma floridae]
Length = 392
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L +H+ P ++C C Y
Sbjct: 18 HMRTHTGEKPYKCDQCDYSAAQKANLDLHLTKHTGEKP-----------YMCGECGYRAA 66
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G+K FKC C+Y A QK L H+
Sbjct: 67 CKSNLSRHMKTHTGEKPFKCDQCNYSAAQKSSLDKHL 103
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G+K +KC C Y A K L FH+
Sbjct: 253 YMCGECGYRTTQKSTLSKHMRTHTGEKPYKCDQCDYSAADKSSLDFHL 300
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 16/98 (16%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLL----MEHSENCPCMVRPDPVKYKFICVACDYFT 96
+M P C C +++++D + L +H+ N P + C C Y T
Sbjct: 271 HMRTHTGEKPYKCDQC-DYSAADKSSLDFHLTKHTGNKP-----------YNCGECGYRT 318
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ HT H G K +KC C Y A QK L HV
Sbjct: 319 RHKSDLLKHTRTHTGKKPYKCDQCDYSAAQKSTLDKHV 356
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T + + H H G+K +KC C Y A QK L H+
Sbjct: 1 MCGECGYRTNLKSTLSKHMRTHTGEKPYKCDQCDYSAAQKANLDLHL 47
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P +C C T +LL R K + C CDY + H H
Sbjct: 308 PYNCGECGYRTRHKSDLLKH--------TRTHTGKKPYKCDQCDYSAAQKSTLDKHVAKH 359
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
GDK + C C Y +K++L H++
Sbjct: 360 TGDKPYMCGECGYRTARKDRLSQHMR 385
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C T + + NH H G+K +KC C Y A +K L+ H+
Sbjct: 112 YMCGECGLRTALKFTLLNHMRTHTGEKPYKCDQCDYSAARKSTLEDHI 159
>gi|198425520|ref|XP_002123041.1| PREDICTED: similar to zinc finger protein [Ciona intestinalis]
Length = 276
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYG----AYQKEKLQFHVKNK 137
+IC CD S N++ H L H G+K+FKC +C G + KE ++ H K
Sbjct: 122 YICEVCDKSFSQSSNLKGHMLTHTGEKRFKCSICGKGFKFSGHIKEHMRIHTGEK 176
>gi|292627186|ref|XP_002666563.1| PREDICTED: zinc finger protein 64 homolog, isoforms 1 and 2 [Danio
rerio]
Length = 642
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
F C CD I+ +++ H+ +H G+K +KC LC Y K L+ HV KHS
Sbjct: 208 FQCNQCDAKFKINSDLKRHSRVHSGEKPYKCDLCDYRCAMKANLKSHVHLKHSA 261
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 13/137 (9%)
Query: 8 LLVPLSTK-KTCLYCNKYVPSDIDVFIGHCQTC-----PNMSFLNSVIPQSCKHCKNFTS 61
LLV +S C +C + +++++F H Q C ++S N+ +S + C S
Sbjct: 12 LLVEVSPDIHICGFCKQQY-NNVELFFAHKQNCCQIPSTHISVRNAGASESLQTC---VS 67
Query: 62 SDVNLLMEHSENCPCMVRPDPVKYKFICV--ACDYFTIISQ-NMRNHTLIHLGDKQFKCC 118
L + +N ++P + + IC C + T Q +M H L H G++ F+C
Sbjct: 68 KVKKTLTKAQKNPSKKLKPALTQKRHICTFSGCTFKTQYGQKDMERHILTHTGERPFECE 127
Query: 119 LCSYGAYQKEKLQFHVK 135
LC +++KL H +
Sbjct: 128 LCHKRFSRRDKLNLHSR 144
>gi|441638116|ref|XP_004090110.1| PREDICTED: transcriptional repressor CTCFL [Nomascus leucogenys]
Length = 422
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 137 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 191
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 136 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 187
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 188 SGEKPYECHICHARFTQNGTMKTHILQKHSENV 220
>gi|260806386|ref|XP_002598065.1| hypothetical protein BRAFLDRAFT_85720 [Branchiostoma floridae]
gi|229283336|gb|EEN54077.1| hypothetical protein BRAFLDRAFT_85720 [Branchiostoma floridae]
Length = 270
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + H IH G+K +KC C Y A +K L+ H+ KH+
Sbjct: 38 YMCGECGYRAAQKSKLSRHMRIHTGEKPYKCDQCDYSASRKSYLKHHMAAKHT 90
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H H GDK + C C Y A QK KL H++
Sbjct: 10 YKCDQCDYSAAEKGSLATHQATHTGDKPYMCGECGYRAAQKSKLSRHMR 58
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C CDY ++ + H GDK + C C Y A QK KL H++
Sbjct: 200 CDQCDYSAAERGSLATYQATHTGDKPYMCGECGYRAAQKSKLSRHMR 246
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++S + L H M + ++C C Y T+
Sbjct: 56 HMRIHTGEKPYKCDQC-DYSASRKSYLKHH------MAAKHTGEKPYMCGECGYRTVQRS 108
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQF 132
+ H H G+K +KC C Y A K+K +
Sbjct: 109 ELSIHMRTHTGEKPYKCDQCDYSAAVKDKSKI 140
>gi|426392252|ref|XP_004062470.1| PREDICTED: transcriptional repressor CTCFL isoform 6 [Gorilla
gorilla gorilla]
Length = 451
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 396
>gi|426392242|ref|XP_004062465.1| PREDICTED: transcriptional repressor CTCFL isoform 1 [Gorilla
gorilla gorilla]
Length = 663
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
>gi|410055366|ref|XP_003953834.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 460
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 396
>gi|357612387|gb|EHJ67957.1| putative gonadotropin inducible transcription factor [Danaus
plexippus]
Length = 597
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
K+ C C Y T + MR H L H+ +K FKC +C QK +LQ H++
Sbjct: 258 KYGCDVCGYTTFTVEVMRRHVLTHVREKPFKCDICDQSYIQKVQLQRHLE 307
>gi|260822988|ref|XP_002603965.1| hypothetical protein BRAFLDRAFT_71747 [Branchiostoma floridae]
gi|229289290|gb|EEN59976.1| hypothetical protein BRAFLDRAFT_71747 [Branchiostoma floridae]
Length = 582
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F+C C Y T + + H H G+K +KC C Y A QK L H N
Sbjct: 456 FVCGECGYRTAYNMTLARHMRTHTGEKPYKCDQCDYSAAQKYDLNNHRAN 505
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C + T + N+ H H G+K +KC C Y A +K L H
Sbjct: 512 YMCSECGFMTANTSNLAKHMRTHTGEKPYKCDHCDYAAARKSGLNRH 558
>gi|195571805|ref|XP_002103893.1| GD20674 [Drosophila simulans]
gi|194199820|gb|EDX13396.1| GD20674 [Drosophila simulans]
Length = 446
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 10 VPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLME 69
+P TK C +C++ S HC + +N + SC C + + + LL+
Sbjct: 220 IPPDTKFVCDHCDEGFRSAA-ALTRHC------NMINLPLTHSCSKCMSQFHNHI-LLVT 271
Query: 70 HSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEK 129
H E C +RP P ++ +C C + N++NH + H G ++ KC CS Y +
Sbjct: 272 HKERC---LRPAPSQH--VCHICGKHLTTAFNLKNHLVRHAGTRRHKCDQCSASFYTAAE 326
Query: 130 LQFHVKNKHSTK 141
L H K H+T+
Sbjct: 327 LCSHQKT-HTTE 337
>gi|410055360|ref|XP_003953831.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 573
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRT 391
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|397487409|ref|XP_003814792.1| PREDICTED: zinc finger protein PLAGL2 [Pan paniscus]
Length = 567
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 52 SCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
SCK C + F S+ L+EH + V + K C CD +++R H ++H
Sbjct: 228 SCKVCLQTFESTQA--LLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHT 285
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G K F C C+ +K+ L HVK HS ++
Sbjct: 286 GRKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 317
>gi|332207879|ref|XP_003253023.1| PREDICTED: transcriptional repressor CTCFL isoform 1 [Nomascus
leucogenys]
Length = 677
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 363 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 411
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 362 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 413
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 414 SGEKPYECHICHARFTQNGTMKTHILQKHSENV 446
>gi|260814474|ref|XP_002601940.1| hypothetical protein BRAFLDRAFT_86424 [Branchiostoma floridae]
gi|229287243|gb|EEN57952.1| hypothetical protein BRAFLDRAFT_86424 [Branchiostoma floridae]
Length = 574
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYK-FICVACDYFTIISQNMRNHTLI 108
P C C +F++S L H M R P + K + C CDY + + ++ H +
Sbjct: 97 PYKCDKC-DFSASHKEYLKRH------MFRHLPAEQKPYKCDQCDYSSAQKEYLKAHMVK 149
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K +KC C Y + QK L+ H+
Sbjct: 150 HGGEKPYKCDQCDYSSTQKHYLKAHM 175
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
K C C+Y T ++ NH +H G++ +KC C Y A +K+ L+ H+ N S + K
Sbjct: 266 KLACSLCEYSTTDPFHLNNHMSVHTGERPYKCDKCDYSAVRKDHLKRHMFNHLSAEQK 323
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++S+ + L H M + K + C CDY T + H +H
Sbjct: 155 PYKCDQC-DYSSTQKHYLKAH------MAKHGEEK-PYKCDHCDYSTGWKNALAAHMSVH 206
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFH 133
G+K F C +C + + K +LQ H
Sbjct: 207 TGEKPFVCEVCGFSSASKHRLQLH 230
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T S N+ H IH G+K +KC LC Y +KE L H+
Sbjct: 524 YLCGECGFRTTKS-NLHRHMKIHSGNKPYKCELCEYCTNRKESLARHM 570
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ P C HC ++++ N L H + + F+C C + +
Sbjct: 174 HMAKHGEEKPYKCDHC-DYSTGWKNALAAH-------MSVHTGEKPFVCEVCGFSSASKH 225
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H G+K +KC C Y A +K L H K KH+
Sbjct: 226 RLQLHKQTHTGEKPYKCDQCDYTASRKVYLARH-KTKHT 263
>gi|297707424|ref|XP_002830506.1| PREDICTED: transcriptional repressor CTCFL isoform 4 [Pongo abelii]
Length = 613
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
>gi|260823158|ref|XP_002604050.1| hypothetical protein BRAFLDRAFT_71660 [Branchiostoma floridae]
gi|229289375|gb|EEN60061.1| hypothetical protein BRAFLDRAFT_71660 [Branchiostoma floridae]
Length = 328
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+Y ++C C+Y T+ + +H H G+K FKC C Y K L+ HV +H+
Sbjct: 35 EYPYMCGECEYRTLRKSHFSDHMRTHTGEKPFKCDQCDYSTILKSYLKRHVSRQHN 90
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M+ P C HC +++++ + L EH ++ + F+C C Y T
Sbjct: 113 HMTKHTGERPYKCDHC-DYSAARKSSLDEH-------LQIHSGEKPFMCGECGYRTAKKS 164
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K FKC C Y A K L H+
Sbjct: 165 RLARHMRTHTGEKPFKCDQCDYSAALKSHLNEHI 198
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 87 FICVACDYFTIISQNMRNH-TLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CDY TI+ ++ H + H GDK + C C Y A +K+KL H+
Sbjct: 66 FKCDQCDYSTILKSYLKRHVSRQHNGDKPYMCGECGYRAARKDKLSQHM 114
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G+K +KC C Y A +K L H+
Sbjct: 207 YMCGECGYRTAKKSRLAIHMRTHTGEKPYKCDQCEYAAAEKSALTRHL 254
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C+ + L L +HS+ P F C C + T
Sbjct: 225 HMRTHTGEKPYKCDQCEYAAAEKSALTRHLFKHSDENP-----------FTCGECGFKTD 273
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ ++ H H +K +KC C Y A QK L H K KH+
Sbjct: 274 SNSHLSRHMRTHTREKPYKCDQCDYSAAQKSGLDGH-KRKHT 314
>gi|440912499|gb|ELR62061.1| Transcriptional repressor CTCFL [Bos grunniens mutus]
Length = 663
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 354 FKCSVCKYASVEASKLKRHIRSHTGERPFQCSLCSYASKDTYKLKRHMRTHSGEK 408
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H +R + F C C Y + + ++ H H
Sbjct: 353 PFKCSVCK-YASVEASKLKRH-------IRSHTGERPFQCSLCSYASKDTYKLKRHMRTH 404
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 405 SGEKPYECHICRARFTQSGTMKMHILQKHSENV 437
>gi|312372817|gb|EFR20694.1| hypothetical protein AND_19652 [Anopheles darlingi]
Length = 1168
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 50 PQSCKHCKN-FTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
P CK C + FT+S L+ H + RP C CDY ++ ++ H
Sbjct: 244 PHRCKRCDSCFTTS--GELVRHVRYRHTLERP------HKCTECDYSSVELSKLKRHIRT 295
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K F+C C+Y + K KL H++
Sbjct: 296 HTGEKPFQCPHCTYASPDKFKLTRHMR 322
>gi|156396424|ref|XP_001637393.1| predicted protein [Nematostella vectensis]
gi|156224505|gb|EDO45330.1| predicted protein [Nematostella vectensis]
Length = 149
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
N S +R ++IC C N+RNH+LIH G+K +KC LC
Sbjct: 44 NKAFNRSSTLKTHIRTHSEVKEYICEVCGKGFHQKGNLRNHSLIHTGEKPYKCALCEKAF 103
Query: 125 YQKEKLQFHV 134
+ L+FH+
Sbjct: 104 NKLSNLKFHM 113
>gi|260823066|ref|XP_002604004.1| hypothetical protein BRAFLDRAFT_71707 [Branchiostoma floridae]
gi|229289329|gb|EEN60015.1| hypothetical protein BRAFLDRAFT_71707 [Branchiostoma floridae]
Length = 740
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T ++ H IH G+K +KC C Y A QK + H+K
Sbjct: 588 YMCGDCGYRTTQKSHISRHIRIHTGEKPYKCDQCDYSAAQKSSIDQHLK 636
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T N HT H G++ +KC C Y A +K L H++
Sbjct: 84 YMCGECGYRTERKSNFSRHTRTHTGERPYKCDQCDYSAARKSSLDKHLQ 132
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+R + ++C C Y T ++ H H G+K +KC C Y A K L H+
Sbjct: 243 IRKHTGEKPYMCGECGYRTTTKSDLSRHMRTHTGEKPYKCDQCDYSAADKSALTKHL 299
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A K L+ HV
Sbjct: 532 YMCGECGYNTTKKDHLLRHMRTHTGEKPYKCDQCDYSAAHKSNLEQHV 579
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEH----SENCPCMVRPDPVKYKFICVACDYFT 96
+M P C C +++++D + L +H S+ P + C C + T
Sbjct: 270 HMRTHTGEKPYKCDQC-DYSAADKSALTKHLFKHSDENP-----------YTCGECGFKT 317
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ ++ H H G+K +KC LC + A K HV+
Sbjct: 318 DSNSHLSRHMRTHTGEKPYKCDLCDFAAADKSSFNRHVR 356
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A K L H+
Sbjct: 140 YMCGECGYRTAQKSDLSKHMRTHTGEKPYKCDQCDYSAVHKSDLDKHL 187
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y N+ H H G+K +KC C + A QK L H++
Sbjct: 196 YMCGECGYRAARKFNLSQHMKTHTGEKPYKCGQCDFSAIQKYDLVKHIR 244
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H IH G+K + C C Y QK L H++
Sbjct: 112 YKCDQCDYSAARKSSLDKHLQIHRGEKPYMCGECGYRTAQKSDLSKHMR 160
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + ++ H H G+K + C C Y A +K L H+K
Sbjct: 168 YKCDQCDYSAVHKSDLDKHLATHTGEKPYMCGECGYRAARKFNLSQHMK 216
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H H G K + C C Y QK + H++
Sbjct: 560 YKCDQCDYSAAHKSNLEQHVAKHTGAKPYMCGDCGYRTTQKSHISRHIR 608
>gi|242006306|ref|XP_002423993.1| zinc finger protein, putative [Pediculus humanus corporis]
gi|212507275|gb|EEB11255.1| zinc finger protein, putative [Pediculus humanus corporis]
Length = 1690
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 26 PSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKY 85
PS + + +S ++ ++P + ++ + N E+ EN C
Sbjct: 1073 PSIVHAVFSQTEELQTVSNMSEILPDTKDPEPDYADINDNNDKENEENAFCQKE----NK 1128
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CD Q ++ HT +H+G K+F C LC + + L+ H
Sbjct: 1129 SYACNTCDKVFSSLQTLKTHTKMHMGKKEFNCELCGWSTLTRSSLRRHA 1177
>gi|260786300|ref|XP_002588196.1| hypothetical protein BRAFLDRAFT_68839 [Branchiostoma floridae]
gi|229273355|gb|EEN44207.1| hypothetical protein BRAFLDRAFT_68839 [Branchiostoma floridae]
Length = 557
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P +C C +FT++ H +VR VK + C ACD+ TI +++ H IH
Sbjct: 383 PYNCDRC-DFTTTKRRRFEAH------LVRHTGVK-PYKCDACDFSTIHRDSLKAHVAIH 434
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+ ++KC C + A K L H+
Sbjct: 435 SGEGRYKCDQCDFSAAWKTTLDRHM 459
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 14/107 (13%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M+ + P C+ C T+ +L L HSE+ P C CD+ T
Sbjct: 458 HMAKHDGEKPFLCEKCGFRTARKCHLRRHLTTHSEDKP-----------HKCGQCDFSTA 506
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
++ H L H G+K+F C C Y L+ H++ KH + +
Sbjct: 507 RKNHLDRHMLTHTGEKRFMCEECGYRTTDNYHLKRHIRRKHERETSE 553
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
N ++ +C C+ FT+++ L +H++ P +P F C CDY T +
Sbjct: 258 NSQHVDEKKTYTCGECE-FTTTNGKHLSKHAKTHP-GGKP------FKCDQCDYRTTLKD 309
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ +H H G+K + C C Y Q+ L H++
Sbjct: 310 RLNSHMRKHTGEKPYMCGECGYRTSQRGNLVTHMRG 345
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H+GDK KC LC + ++K+ L H+
Sbjct: 324 YMCGECGYRTSQRGNLVTHMRGHVGDKPHKCDLCGHSVWRKKALDRHM 371
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 41 NMSFLNSVIPQSCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
+M P C+ C K F+ D NL N + K + C C++ T
Sbjct: 227 HMRSHTGEKPYRCEECSKKFSQLDSNL------NKHKNSQHVDEKKTYTCGECEFTTTNG 280
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+++ H H G K FKC C Y K++L H++
Sbjct: 281 KHLSKHAKTHPGGKPFKCDQCDYRTTLKDRLNSHMR 316
>gi|392933929|ref|NP_001255973.1| transcriptional repressor CTCFL isoform 4 [Homo sapiens]
gi|111550150|gb|ABH10097.1| BORIS transcription factor transcript variant C3 [Homo sapiens]
Length = 665
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRT 391
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|432091225|gb|ELK24430.1| Fez family zinc finger protein 1 [Myotis davidii]
Length = 519
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
FIC C N +NH L H G+KQFKC +C+ +Q L FH+ + K
Sbjct: 310 FICEFCGKGFHQKGNYKNHKLTHSGEKQFKCNICNKAFHQVYNLTFHMHTHNDKK 364
>gi|351697820|gb|EHB00739.1| Transcriptional repressor CTCFL [Heterocephalus glaber]
Length = 775
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C C Y ++ + ++ H L H G++ F+C LC+Y + KL+ H+
Sbjct: 350 FKCSMCKYESVEASKLKRHVLSHTGERPFQCLLCNYASTDTHKLKRHM 397
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H V + F C+ C+Y + + ++ H L H
Sbjct: 349 PFKCSMCK-YESVEASKLKRH-------VLSHTGERPFQCLLCNYASTDTHKLKRHMLTH 400
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 401 SGEKPYECHICHARFTQSGTMKMHMLQKHSENV 433
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 51/124 (41%), Gaps = 19/124 (15%)
Query: 15 KKTCLYCNK--YVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHC-KNFTSSDVNLLMEHS 71
KK CN + S I F H M S P +C C K F +S L+ +
Sbjct: 261 KKQTFQCNLCLFTSSRISSFNRH------MKIHTSEKPHTCHLCLKTFRTST---LLRNH 311
Query: 72 ENCPCMVRPDPVKYKFICVACDY-FTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
N RP + CV CD F + +R+ H +K FKC +C Y + + KL
Sbjct: 312 INTHTGTRP------YKCVDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCKYESVEASKL 365
Query: 131 QFHV 134
+ HV
Sbjct: 366 KRHV 369
>gi|260813270|ref|XP_002601341.1| hypothetical protein BRAFLDRAFT_82748 [Branchiostoma floridae]
gi|229286636|gb|EEN57353.1| hypothetical protein BRAFLDRAFT_82748 [Branchiostoma floridae]
Length = 773
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C + L +H+ + P + C CDY +
Sbjct: 295 HMRTHTGEKPYKCDQCDYSAADKSTRLAKHTNDKP-----------YKCDQCDYSSAKKS 343
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
N+ H H GDK F C C Y QK L H++
Sbjct: 344 NLDRHLAKHTGDKPFMCGECGYRTSQKSDLSKHMRT 379
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
C +M P C C +++++ + L H + D + +C C Y
Sbjct: 34 CDLSKHMRIHTGEKPYKCDQC-DYSAAQKSTLDRH---LAAHSKADAGEKSHVCEDCGYR 89
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
T ++ H IH G+K + C C Y A +K+ L H+ N
Sbjct: 90 TARKSHLLQHMRIHTGEKPYMCDQCDYSAKRKQHLDIHLAN 130
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y T + + H H G+K +KC C Y QK KL H++
Sbjct: 638 YMCGECGYRTALKYTLSEHMKTHTGEKPYKCGECGYRTAQKSKLSQHMRT 687
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P SC +C + NL L +H+ + P ++C C Y T
Sbjct: 544 HMRTHTGYKPYSCDYCDYSAARKYNLDQHLAKHTGDKP-----------YMCGECGYRTT 592
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G + +KC C Y + QK L H+
Sbjct: 593 QKSDLSKHMRTHTGQRPYKCDQCDYSSAQKSTLDRHL 629
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T+ ++ H H G+K +KC C Y A QK+ L H+
Sbjct: 414 YMCGECGYRTVQKCDLSKHMKTHTGEKPYKCDQCDYSAVQKQSLDLHL 461
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C ++ NL L +H+ + P F+C C Y T ++ H
Sbjct: 329 PYKCDQCDYSSAKKSNLDRHLAKHTGDKP-----------FMCGECGYRTSQKSDLSKHM 377
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K +KC C Y A +K L H+
Sbjct: 378 RTHTGEKPYKCDQCDYSAARKSTLDNHL 405
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y T ++ H H G+K +KC C Y A QK L H+ KHS
Sbjct: 137 FMCGECGYRTTQKCDLSKHMRTHTGEKPYKCDQCDYSAAQKSTLDQHL-AKHS 188
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y + N+ H H G K +KC C Y A K L H K
Sbjct: 722 YMCGECGYRSAQRSNLAKHMRTHTGKKTYKCDQCDYSAAPKSTLDKHYKT 771
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKE-KLQFHVKNK 137
++C C Y T+ ++ H H G+K +KC C Y A K +L H +K
Sbjct: 277 YMCGECGYRTVTKYDLTKHMRTHTGEKPYKCDQCDYSAADKSTRLAKHTNDK 328
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H IH G+K +KC C Y A QK H + KHS
Sbjct: 221 YMCGECGYRTTQMFTLSKHMRIHTGEKPYKCDQCDYSAAQKSAFYRH-QAKHS 272
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY N+ H H GDK + C C Y QK L H++
Sbjct: 554 YSCDYCDYSAARKYNLDQHLAKHTGDKPYMCGECGYRTTQKSDLSKHMRT 603
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T ++ H IH G K +KC C Y A L+ H+ KH+T+
Sbjct: 470 YMCGECGYRTACKSHLSQHMRIHTGPKPYKCDQCDYSATFNSTLKRHL-TKHTTE 523
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C CDY Q++ H H GDK F C C Y QK L H++
Sbjct: 109 YMCDQCDYSAKRKQHLDIHLANHTGDKPFMCGECGYRTTQKCDLSKHMRT 158
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C + ++ + L +H +R + + C C+Y ++
Sbjct: 656 HMKTHTGEKPYKCGEC-GYRTAQKSKLSQH-------MRTHSGQKPYKCDQCNYSAALNS 707
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H H G+K + C C Y + Q+ L H++
Sbjct: 708 TLKQHLAKHTGEKPYMCGECGYRSAQRSNLAKHMRT 743
>gi|261289701|ref|XP_002604827.1| hypothetical protein BRAFLDRAFT_206423 [Branchiostoma floridae]
gi|229290155|gb|EEN60837.1| hypothetical protein BRAFLDRAFT_206423 [Branchiostoma floridae]
Length = 229
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC ++ S+ +N + +H +++C C Y T + NM H + H
Sbjct: 145 PFKCSHC-DYRSAQMNAVKKHEA-------IHTGNKRYLCDQCGYRTSNTSNMTKHKMTH 196
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K ++C C Y + + L+ H+ N+H+
Sbjct: 197 SGEKPYRCDACGYSSNNRSNLKTHM-NQHN 225
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 79 RPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
RP P K C CDY + + H H G K F C CSY A K L+ H++
Sbjct: 30 RPRPYK----CPHCDYAAMAKGTLATHIARHTGHKPFACGDCSYRAVTKSLLERHIQ 82
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+F C CD+ T S ++R+H L H G+K + C C + A + LQ H+
Sbjct: 89 QFKCSECDFRTARSASLRSHMLKHTGEKPYVCEECGFRAAYRGCLQKHI 137
>gi|260806360|ref|XP_002598052.1| hypothetical protein BRAFLDRAFT_252967 [Branchiostoma floridae]
gi|229283323|gb|EEN54064.1| hypothetical protein BRAFLDRAFT_252967 [Branchiostoma floridae]
Length = 318
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y + H H G+K FKC C Y A QK KL H++
Sbjct: 124 YMCGKCGYRAAQRSTLSKHMRTHTGEKPFKCDQCDYSATQKSKLSVHMRT 173
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H H GDK +KC C Y A Q+ L H+ H+
Sbjct: 11 YMCGECGYRTSTKGALSRHMRTHTGDKPYKCDQCDYSAAQRANLDKHIAAIHT 63
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + N+ H H GDK + C C Y A Q+ L H++
Sbjct: 96 YKCDQCDYSAAVKCNLDTHRTTHTGDKPYMCGKCGYRAAQRSTLSKHMRT 145
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C + + ++ H H G+K +KC C Y A QK + H HS
Sbjct: 180 YKCGECGFRAALKSDLARHMRTHTGEKPYKCDQCDYSATQKSSVDIHKAAIHS 232
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C C Y N+ H H G+K F C C Y A Q+ L H++
Sbjct: 265 YKCDQCGYSAADLTNLATHMRTHTGEKPFMCGECGYRAAQRANLSRHMRT 314
>gi|431904955|gb|ELK10080.1| Zinc finger X-chromosomal protein [Pteropus alecto]
Length = 794
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 510 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 558
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 559 HTGEKPYQCQFCEYRSADSSNLKTHVKTKHSKEM 592
>gi|260818017|ref|XP_002603881.1| hypothetical protein BRAFLDRAFT_206062 [Branchiostoma floridae]
gi|229289205|gb|EEN59892.1| hypothetical protein BRAFLDRAFT_206062 [Branchiostoma floridae]
Length = 202
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
V +F C CDY + HT H G+K +KC C Y A QK L H+
Sbjct: 6 VDKRFACTECDYRAAFRSQLLIHTRKHTGEKPYKCDQCDYSASQKGSLDQHM 57
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 15/103 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M V P C C + NL + +HS P F+C C Y T
Sbjct: 112 HMRKHTGVKPYKCGQCDYSAAKKGNLDQHMTKHSGEKP-----------FMCEKCGYRTA 160
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
++ H H +K +KC C Y K L+ H+ +KH++
Sbjct: 161 RKIDLSRHMRTHTSEKPYKCDQCDYAVTDKRHLKKHL-DKHAS 202
>gi|260787901|ref|XP_002588990.1| hypothetical protein BRAFLDRAFT_89181 [Branchiostoma floridae]
gi|229274162|gb|EEN45001.1| hypothetical protein BRAFLDRAFT_89181 [Branchiostoma floridae]
Length = 537
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C HC + +L L +H+ + P ++C C Y
Sbjct: 336 HMRTHTGEKPFKCDHCDYSAAKKSHLDYHLAKHTGDKP-----------YMCAECGYKAA 384
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ N+ H H G+K KC C+Y A +K+ L H+ KHS
Sbjct: 385 LKSNLSKHMRTHTGEKPHKCDQCNYSAARKDSLDLHLA-KHS 425
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A QK L H+
Sbjct: 38 YMCGECGYRTAHKSSLSRHMRTHTGEKPYKCDQCDYSAAQKSNLDSHL 85
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C AC Y T ++ H H G+K +KC C + A QK L+ H+
Sbjct: 262 YMCGACGYRTAWKTHLSRHMRSHTGEKPYKCDQCDFSAAQKSNLKQHL 309
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L +H+ + P ++C C Y
Sbjct: 280 HMRSHTGEKPYKCDQCDFSAAQKSNLKQHLSKHTGDKP-----------YMCGECGYKAT 328
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K FKC C Y A +K L +H+
Sbjct: 329 WKSHLSQHMRTHTGEKPFKCDHCDYSAAKKSHLDYHL 365
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M S P C C + NL L +H+ + P ++C C Y T
Sbjct: 168 HMRTHTSDKPYKCDQCDFSAAQKSNLNQHLSKHTGDKP-----------YMCGECGYRTA 216
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K +KC C+Y A QK L H+
Sbjct: 217 QKSTLSRHMRTHTGEKPYKCDQCNYSAAQKCSLDQHL 253
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ +H H GDK + C C Y A K L H++
Sbjct: 66 YKCDQCDYSAAQKSNLDSHLATHTGDKSYMCGECGYRAAHKSYLYRHMR 114
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C + T+ + H H G+K +KC C Y QK L H K
Sbjct: 486 YMCGECGFRTVQKSTLSQHMRTHTGEKPYKCDQCDYSVAQKSSLDNHCK 534
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C CDY N+ H H+GDK + C C Y K L H++ S K
Sbjct: 122 YKCGQCDYSAACKSNLDRHLARHIGDKPYMCGECGYRTAHKSDLVKHMRTHTSDK 176
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H IH GDK + C C + QK L H++
Sbjct: 458 YKCDQCDYSATTKYHLDRHLAIHTGDKPYMCGECGFRTVQKSTLSQHMR 506
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H DK +KC C + A QK L H+
Sbjct: 150 YMCGECGYRTAHKSDLVKHMRTHTSDKPYKCDQCDFSAAQKSNLNQHL 197
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CD+ N++ H H GDK + C C Y A K L H++
Sbjct: 290 YKCDQCDFSAAQKSNLKQHLSKHTGDKPYMCGECGYKATWKSHLSQHMR 338
>gi|443724890|gb|ELU12691.1| hypothetical protein CAPTEDRAFT_226185 [Capitella teleta]
Length = 1146
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+FIC C+ +++ NH LIHL +KQFKC +C+ E L+ H+
Sbjct: 847 RFICEVCNSAFKSRKDLNNHCLIHLKEKQFKCSICALPCRSAESLRVHM 895
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 25 VPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVK 84
+ +D+D+ H Q C N + C+HCK S+ H+ + ++
Sbjct: 295 IKADVDLS-QHVQFCKNYNRGT----MQCRHCKEMISN------RHAFRAHMRTKHSDLQ 343
Query: 85 YK-FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+K F C CDY + ++ H +H K + C +C G K+KLQ H+K
Sbjct: 344 FKPFKCPLCDYRAEVKASVARHINVHSAHKPYACTVCGRGFAFKQKLQIHMK 395
>gi|410055362|ref|XP_003953832.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 461
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 137 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 185
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 136 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 187
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 188 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 220
>gi|426392248|ref|XP_004062468.1| PREDICTED: transcriptional repressor CTCFL isoform 4 [Gorilla
gorilla gorilla]
Length = 573
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++ K
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEK 396
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 341 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 392
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 393 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>gi|391347793|ref|XP_003748138.1| PREDICTED: uncharacterized protein LOC100909325 [Metaseiulus
occidentalis]
Length = 818
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 49 IPQ-SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL 107
IP+ SC HC +F ++ V+ L H + V+ F C C + T R H
Sbjct: 699 IPEKSCPHC-DFKTTVVSQLRAH------IKFHIGVRAMFCCEQCGFLTADHNVHRKHLA 751
Query: 108 IHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
H G+K +KC CSY + Q + HVK H K +
Sbjct: 752 QHTGEKPYKCRWCSYASIQASTYKQHVKKLHPEKAAE 788
>gi|260811187|ref|XP_002600304.1| hypothetical protein BRAFLDRAFT_118283 [Branchiostoma floridae]
gi|229285590|gb|EEN56316.1| hypothetical protein BRAFLDRAFT_118283 [Branchiostoma floridae]
Length = 634
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C CDY + ++ +H H G+K FKC C Y A +K L H+ KH
Sbjct: 145 YKCDQCDYSAALKGSLDHHKRKHTGEKPFKCDQCDYSAVRKGDLDIHIMAKH 196
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
F+C C Y ++ H H G+K FKC C Y A QK L H++ KH+ ++K
Sbjct: 50 FMCGECGYRVAYKSHLIRHMRRHTGEKPFKCDQCDYSAVQKASLDHHMR-KHTGQIK 105
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D++++ +H P ++C C Y T ++ H H G+K +KC C Y
Sbjct: 189 DIHIMAKHIGEKP-----------YMCGECGYRTEYRYSLTQHMRTHTGEKPYKCDQCDY 237
Query: 123 GAYQKEKLQFHVKNKHSTK 141
A K L +H++ KH K
Sbjct: 238 SAALKGSLIYHMR-KHKGK 255
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CDY + ++ +H H G+K +KC C Y +K L H+
Sbjct: 463 FKCDQCDYSAALKGSLDHHMRKHTGEKPYKCDQCDYSTVRKGDLDIHM 510
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
+++++D + L +H V V+ +F+C C Y T ++ H H G K FKC
Sbjct: 264 DYSTADKSHLDQH-------VAEQTVEKQFMCGRCGYKTDNRFHLSEHMKKHTGWKPFKC 316
Query: 118 CLCSYGAYQKEKLQFHV 134
C Y A QK H+
Sbjct: 317 NQCDYSAAQKWAFDCHM 333
>gi|92096553|gb|AAI15332.1| Wu:fo94f09 protein [Danio rerio]
Length = 666
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
F C CD I+ +++ H+ +H G+K +KC LC Y K L+ HV KHS
Sbjct: 232 FQCNQCDAKFKINSDLKRHSRVHSGEKPYKCDLCDYRCAMKANLKSHVHLKHSA 285
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTC-----PNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSE 72
C +C + +++++F H Q C ++S N+ +S + C S V + ++
Sbjct: 47 CGFCKQQY-NNVELFFAHKQNCCQIPSTHISVRNAGASESLQTC----VSKVKKTLTKAQ 101
Query: 73 NCPCM-VRPDPVKYKFICV--ACDYFTIISQ-NMRNHTLIHLGDKQFKCCLCSYGAYQKE 128
P ++P + + IC C + T Q +M H L H G++ F+C LC +++
Sbjct: 102 KTPSKKLKPALTQKRHICTFSGCTFKTQYGQKDMERHILTHTGERPFECELCHKRFSRRD 161
Query: 129 KLQFHVK 135
KL H +
Sbjct: 162 KLNLHSR 168
>gi|441638110|ref|XP_004090108.1| PREDICTED: transcriptional repressor CTCFL [Nomascus leucogenys]
Length = 643
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 326 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 374
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 325 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 376
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 377 SGEKPYECHICHARFTQNGTMKTHILQKHSENV 409
>gi|392933939|ref|NP_001255978.1| transcriptional repressor CTCFL isoform 9 [Homo sapiens]
gi|259028000|gb|ABH10107.2| BORIS transcription factor transcript variant B3 [Homo sapiens]
Length = 460
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 137 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 185
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 136 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 187
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 188 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 220
>gi|260825758|ref|XP_002607833.1| hypothetical protein BRAFLDRAFT_199324 [Branchiostoma floridae]
gi|229293182|gb|EEN63843.1| hypothetical protein BRAFLDRAFT_199324 [Branchiostoma floridae]
Length = 145
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C+Y + + NM++H H G+K FKC C Y A QK L H+
Sbjct: 4 YHCPQCEYTSKVKVNMQHHIRTHTGEKPFKCSECDYSASQKVHLDTHM 51
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C + T N+ H H G+K +KC LCSY A ++ L H++
Sbjct: 60 YMCEECGHRTAFRCNLVRHLRTHSGEKPYKCELCSYRAIRRTHLTNHMR 108
>gi|260814424|ref|XP_002601915.1| hypothetical protein BRAFLDRAFT_124589 [Branchiostoma floridae]
gi|229287218|gb|EEN57927.1| hypothetical protein BRAFLDRAFT_124589 [Branchiostoma floridae]
Length = 469
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 15/125 (12%)
Query: 17 TCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPC 76
TC C + S +++I +M V P C C+ T N+++ +
Sbjct: 186 TCEVCGVRMGSKSNLWI-------HMKTHTGVTPYGCGECEYTTFVKSNMMVH--MDVHA 236
Query: 77 MVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+P + C CD+ T ++ H H GDK F C +C + A QK + H+K
Sbjct: 237 GFKP------YKCDQCDFSTAWKGSLDTHKKRHTGDKPFMCGVCGHRAAQKAAISQHMKT 290
Query: 137 KHSTK 141
+ K
Sbjct: 291 HGAEK 295
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGD---KQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T+ ++ H H G ++++C LC Y A Q++ L+ HV +KH+
Sbjct: 325 YMCGECGFRTVYKHSLAKHMTTHTGAWQPRKYRCPLCDYSAVQRKVLEAHVMSKHT 380
>gi|432110181|gb|ELK33957.1| Transcriptional repressor CTCFL [Myotis davidii]
Length = 642
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 27/54 (50%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
KF C C Y + M HTL H G+K F C CS +KE L HV+ H+
Sbjct: 478 KFKCEHCSYTCKQGRRMALHTLTHAGEKLFACLFCSQRFTKKELLSAHVRKCHA 531
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C+Y ++ + ++ H H G++ ++C LCSY + KL+ H++ K
Sbjct: 336 FKCSTCNYASVEASKLKRHIRSHTGERPYQCDLCSYASKDTHKLKRHMRTHSGEK 390
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C N+ S + + L H +R + + C C Y + + ++ H H
Sbjct: 335 PFKCSTC-NYASVEASKLKRH-------IRSHTGERPYQCDLCSYASKDTHKLKRHMRTH 386
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K ++C +C Q ++ H+ KHS
Sbjct: 387 SGEKPYECHVCHRHFTQSGTMKIHIVQKHS 416
>gi|391342906|ref|XP_003745756.1| PREDICTED: uncharacterized protein LOC100907677 [Metaseiulus
occidentalis]
Length = 1189
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
V F C C Y + + H H G++ F+C +C Y K + HV+ +H+ +
Sbjct: 451 VNAPFACTLCSYVSTDKSTLVRHLRTHNGERPFQCAICKYAFTTKANCERHVRKRHNKQT 510
Query: 143 K 143
K
Sbjct: 511 K 511
>gi|441638113|ref|XP_004090109.1| PREDICTED: transcriptional repressor CTCFL [Nomascus leucogenys]
Length = 454
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 137 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 185
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 136 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 187
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 188 SGEKPYECHICHARFTQNGTMKTHILQKHSENV 220
>gi|410055356|ref|XP_003953829.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 666
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
>gi|321471491|gb|EFX82464.1| hypothetical protein DAPPUDRAFT_49172 [Daphnia pulex]
Length = 68
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
K + C C S N+ H++IH G K FKC LCS+ QK LQ H+++ H
Sbjct: 8 KEGYSCQVCRKMFTSSSNLAVHSMIHSGTKPFKCDLCSWSFRQKAHLQKHMRHIH 62
>gi|296235144|ref|XP_002762777.1| PREDICTED: zinc finger X-chromosomal protein isoform 2 [Callithrix
jacchus]
Length = 844
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 560 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 608
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 609 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 642
>gi|198438233|ref|XP_002130049.1| PREDICTED: similar to zinc finger protein 407 [Ciona intestinalis]
Length = 646
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C F++ LL H +R + + C C + T S ++ H L H
Sbjct: 362 PFKCDMC-TFSTKTKQLLSRH-------IRKHTGEKPYKCEHCTFSTACSAGLKRHILQH 413
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G K F+C CSY + E L+ H+KN
Sbjct: 414 TGSKPFRCPYCSYRSSNIENLRKHIKN 440
>gi|355757243|gb|EHH60768.1| Zinc finger X-chromosomal protein [Macaca fascicularis]
Length = 822
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 538 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 586
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 587 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 620
>gi|260789295|ref|XP_002589682.1| hypothetical protein BRAFLDRAFT_61494 [Branchiostoma floridae]
gi|229274864|gb|EEN45693.1| hypothetical protein BRAFLDRAFT_61494 [Branchiostoma floridae]
Length = 527
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTII 98
M P C C + NL L +H+ + P ++C C Y T
Sbjct: 1 MRTHTGEKPYKCDQCDYSAARKSNLDRHLAKHTGDKP-----------YMCGECGYRTAK 49
Query: 99 SQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K FKC C Y A QK L H+
Sbjct: 50 RSHLAEHVRTHTGEKPFKCDQCDYSASQKSALNQHL 85
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H GDK +KC C Y A QK L H+
Sbjct: 275 YMCGECGYRTTRKSHLAEHMRTHTGDKPYKCDQCDYSAAQKSALNRHL 322
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++ + L EH VR + F C CDY + H IH
Sbjct: 37 PYMCGEC-GYRTAKRSHLAEH-------VRTHTGEKPFKCDQCDYSASQKSALNQHLAIH 88
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
GDK + C C Y QK L H++
Sbjct: 89 TGDKPYMCGECGYRTVQKSHLAEHMRT 115
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CDY N+ H +H G+K +K C Y QK L H++ H+
Sbjct: 471 YKCDQCDYSAARKDNLYQHLTVHTGEKPYKSGECGYRTAQKSNLSTHMRKTHT 523
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
++C C Y T ++ H H G+K +KC C Y A QK L H+ KH++ K
Sbjct: 218 YMCGECGYRTARRSDLSIHLRTHTGEKPYKCDQCDYSAAQKSNLDSHL-TKHTSGDK 273
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + H H GDK + C C Y A QK L H++
Sbjct: 303 YKCDQCDYSAAQKSALNRHLATHTGDKPYMCGECGYRAAQKSALSRHMRT 352
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H GDK +KC C Y A Q L H+
Sbjct: 387 YLCDQCGYRTAQKYSLFQHMRTHTGDKPYKCDQCDYSAAQTSALNRHL 434
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY N+ H H GDK + C C Y ++ L HV+
Sbjct: 10 YKCDQCDYSAARKSNLDRHLAKHTGDKPYMCGECGYRTAKRSHLAEHVRT 59
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G+K +KC C Y A QK L H+
Sbjct: 150 YMCGECGYRTAWKYALSLHMRTHTGEKPYKCDQCDYSAAQKNTLDQHL 197
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + H H G+K +KC C Y A +K+ L H+
Sbjct: 443 YMCGECGYRTAYKPTLSIHMRTHTGEKPYKCDQCDYSAARKDNLYQHL 490
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H H GDK +KC C Y +K L H+
Sbjct: 331 YMCGECGYRAAQKSALSRHMRTHTGDKPYKCDQCDYSTARKSHLDQHI 378
>gi|426242159|ref|XP_004014942.1| PREDICTED: zinc finger protein 217 [Ovis aries]
Length = 895
Score = 42.0 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C C F + + H H G+K +KC C Y A QK L++H++ H K D
Sbjct: 648 CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCDYAAAQKTSLRYHLERHHKDKQTD 703
>gi|260791349|ref|XP_002590702.1| hypothetical protein BRAFLDRAFT_60038 [Branchiostoma floridae]
gi|229275898|gb|EEN46713.1| hypothetical protein BRAFLDRAFT_60038 [Branchiostoma floridae]
Length = 198
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++D + L H E P F+C C Y T +
Sbjct: 18 HMRTHTGEKPYKCDQC-DYSAADKSALGRHLEK---HTGEKP----FMCEECGYRTSLKA 69
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC C Y A +K L H+
Sbjct: 70 HLSRHMRTHTGEKPYKCDQCDYSAAKKSTLNDHL 103
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+C C Y T N+ H H G+K +KC C Y A K L H++
Sbjct: 1 MCGECGYRTTQKSNLSRHMRTHTGEKPYKCDQCDYSAADKSALGRHLE 48
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L +H + R + K ++C C Y +
Sbjct: 74 HMRTHTGEKPYKCDQC-DYSAAKKSTLNDH------LARHNGDK-PYMCGECGYRAVWKS 125
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H G+K +KC C + A K L H+
Sbjct: 126 HLSQHMRTHTGEKPYKCDQCDFAAADKAALGHHL 159
>gi|301608842|ref|XP_002934000.1| PREDICTED: zinc finger protein 142-like [Xenopus (Silurana)
tropicalis]
Length = 1919
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C+Y T Q + H+ IH G+K +KC LCSY +L++H++
Sbjct: 1681 YKCSDCEYTTKNKQKITWHSRIHTGEKPYKCHLCSYACADPSRLKYHMR 1729
>gi|260786795|ref|XP_002588442.1| hypothetical protein BRAFLDRAFT_199094 [Branchiostoma floridae]
gi|229273604|gb|EEN44453.1| hypothetical protein BRAFLDRAFT_199094 [Branchiostoma floridae]
Length = 602
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
FIC C Y T ++ H H G+K KC C Y A +++ L+ H+ KH+ K
Sbjct: 8 FICEECGYRTTCRGHLTRHVRKHTGEKPMKCDQCDYSAARRDHLKQHIMVKHTGK 62
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++ + LM H +R + + C C Y T+ ++ H H
Sbjct: 64 PYICGEC-GYRTTKSSYLMIH-------MRKHTGEKPYKCEICQYRTVDKSSLAAHIRTH 115
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC LC Y A Q+ L HV KH+
Sbjct: 116 TGEKPYKCDLCDYSATQRCHLAHHVTMKHT 145
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
++C C Y T I ++ H H G+K +KC C Y A QK ++ HV KH++
Sbjct: 495 YLCSECGYRTSIRYSLTLHMRKHNGEKPYKCGQCDYSAAQKCRIDKHVLLKHTS 548
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 17/99 (17%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSS-----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
+M N P C C +++++ D ++L++H+ N P ++C C +
Sbjct: 513 HMRKHNGEKPYKCGQC-DYSAAQKCRIDKHVLLKHTSNKP-----------YLCAECGFR 560
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
T N H H G K KC C Y A +K++L+ H+
Sbjct: 561 TADKFNFLRHMGTHGGRKPHKCDHCDYSAARKDQLKKHM 599
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 50 PQSCKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
P C C S+ D +++++H+ P F+C C + T+ + H
Sbjct: 177 PYKCDQCDYSASTKYTLDRHVMVKHTGEKP-----------FMCGECGHRTVTRFGLTRH 225
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G+K +KC C + + +K+ L H+ KH+
Sbjct: 226 MRTHTGEKPYKCDQCDFCSARKQYLDIHIMTKHT 259
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + + H H G+K +KC C Y A +K L+ HV H+
Sbjct: 381 YLCENCGYRSATRSGLVRHVRKHTGEKPYKCDQCDYSAARKHHLEQHVMTNHN 433
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++ + L +H MV+ K +IC C Y T S + H H
Sbjct: 35 PMKCDQC-DYSAARRDHLKQH-----IMVKHTGKK-PYICGECGYRTTKSSYLMIHMRKH 87
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K +KC +C Y K L H++
Sbjct: 88 TGEKPYKCEICQYRTVDKSSLAAHIR 113
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F+C C Y T + HT H G+ +KC C Y A K L HV KH+
Sbjct: 149 RFVCGECGYKTADKTSFIVHTRKHTGENPYKCDQCDYSASTKYTLDRHVMVKHT 202
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDK--QFKCCLCSYGAYQKEKLQFHVKNKHS 139
+IC C Y ++ HT H G+K +KC C Y + QK ++ HV KH+
Sbjct: 322 YICGECGYRAKNKSSLNKHTKTHKGEKPYNYKCNQCDYSSTQKCQMDKHVATKHT 376
>gi|444730818|gb|ELW71191.1| Transcriptional repressor CTCFL [Tupaia chinensis]
Length = 787
Score = 41.6 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F C C Y ++ + +R H H G++ F+C LCSY KL+ H++ K+
Sbjct: 350 FKCSMCKYASVEASKLRRHVRSHTGERPFQCGLCSYACKDTYKLKRHMRTHSEFKL 405
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
+F C C Y +++M H H G+K F C CS QK+ L H K H +
Sbjct: 565 RFKCEHCGYACNQARHMAVHVRTHTGEKPFTCLSCSKHFRQKQLLSVHFKKSHDS 619
>gi|403263657|ref|XP_003924135.1| PREDICTED: zinc finger X-chromosomal protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 843
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 559 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 607
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 608 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 641
>gi|326669550|ref|XP_003199041.1| PREDICTED: zinc finger protein 507-like [Danio rerio]
Length = 957
Score = 41.6 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 49 IPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYK--FICVACDYFTIISQNMRNHT 106
I S H + T+ +ME S M DPV + F C CDY + +RNH
Sbjct: 733 ISSSLTHAEESTA-----IMEESAK---MTDEDPVGEQSVFKCDVCDYTSSTYVGVRNHR 784
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
IH DK ++C LC Y L+ H+
Sbjct: 785 RIHNSDKPYRCSLCGYVCSHPPSLKSHM 812
>gi|260818160|ref|XP_002603952.1| hypothetical protein BRAFLDRAFT_242316 [Branchiostoma floridae]
gi|229289277|gb|EEN59963.1| hypothetical protein BRAFLDRAFT_242316 [Branchiostoma floridae]
Length = 323
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++C C Y T N+ H H G+K FKC C Y A +K L H+K + K+
Sbjct: 206 YMCGECGYRTANMSNLTAHMKTHTGEKPFKCEQCDYSAARKYTLDLHLKKHNGEKL 261
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T H H G+K FKC C Y A +K +L H++
Sbjct: 122 YMCGKCGYLTANRSTFTVHMRTHTGEKPFKCDQCDYSAARKSELSNHIR 170
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C CDY + NH H G+K +KC C Y A + L+ H+ +KH+
Sbjct: 150 FKCDQCDYSAARKSELSNHIRTHTGEKPYKCDQCDYSAAHRYALKQHL-SKHT 201
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY T + H + H GDK + C C Y A K L H++
Sbjct: 10 YKCDQCDYSTAQKSTLDQHLVRHTGDKPYMCGECGYRAVNKSTLSRHMR 58
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQN 101
M P C C +++++ + L +H +VR K ++C C Y +
Sbjct: 1 MRTHTGEKPYKCDQC-DYSTAQKSTLDQH------LVRHTGDK-PYMCGECGYRAVNKST 52
Query: 102 MRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K +KC C Y QK L H+
Sbjct: 53 LSRHMRTHTGEKPYKCDQCDYSTAQKSTLDQHL 85
>gi|41386733|ref|NP_803456.1| zinc finger X-chromosomal protein [Bos taurus]
gi|3142141|dbj|BAA28278.1| Zfx [Bos taurus]
gi|296470523|tpg|DAA12638.1| TPA: zinc finger X-chromosomal protein [Bos taurus]
Length = 800
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 598
>gi|426392244|ref|XP_004062466.1| PREDICTED: transcriptional repressor CTCFL isoform 2 [Gorilla
gorilla gorilla]
Length = 666
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 342 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 390
>gi|260832828|ref|XP_002611359.1| hypothetical protein BRAFLDRAFT_120333 [Branchiostoma floridae]
gi|229296730|gb|EEN67369.1| hypothetical protein BRAFLDRAFT_120333 [Branchiostoma floridae]
Length = 510
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H IH G+K +KC LC Y + QK L H+
Sbjct: 19 YMCGECGYRTARKSHLSQHMRIHTGEKPYKCDLCDYSSAQKSNLDCHL 66
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y+T + H H G+K +KC +C Y A QK L H
Sbjct: 215 YMCGECGYWTAHKSALSQHMRTHTGEKPYKCDMCDYSAAQKFALNSH 261
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T+ + H H G+K +KC C Y A +K L+ H
Sbjct: 327 YMCGECGYRTVEKSTLSRHMRTHTGEKPYKCDQCDYAATRKFDLESH 373
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T ++ H H G+K +KC C Y A +K L H
Sbjct: 159 YMCGECGYLTSSRSSLSKHMRTHTGEKPYKCDQCDYSAARKSTLDSH 205
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T+ + H H G+K ++C LC + QK L H
Sbjct: 383 YMCGECGYRTVQKSTLSKHMRTHTGEKPYRCDLCDHSTAQKSSLDSH 429
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y+T + H H G+K +KC C Y A +K L H
Sbjct: 103 YMCGECGYWTAHKSALSQHMKTHTGEKPYKCDQCDYSAARKSTLDSH 149
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H IH G+K +KC +C Y A K L H+
Sbjct: 271 YMCGECGYRMAHKSALSQHMRIHTGEKPYKCDMCDYSAAHKCSLDNHL 318
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C TSS +L +R + + C CDY + +H + H
Sbjct: 158 PYMCGECGYLTSSRSSLSKH--------MRTHTGEKPYKCDQCDYSAARKSTLDSHRVKH 209
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K + C C Y K L H++
Sbjct: 210 TGEKPYMCGECGYWTAHKSALSQHMRT 236
>gi|296481295|tpg|DAA23410.1| TPA: pleiomorphic adenoma gene-like 2 [Bos taurus]
Length = 587
Score = 41.6 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 52 SCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
SCK C + F S+ L+EH + V + K C CD +++R H ++H
Sbjct: 248 SCKVCLQTFESTQA--LLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHT 305
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G K F C C+ +K+ L HVK HS ++
Sbjct: 306 GRKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 337
>gi|260832618|ref|XP_002611254.1| hypothetical protein BRAFLDRAFT_207585 [Branchiostoma floridae]
gi|229296625|gb|EEN67264.1| hypothetical protein BRAFLDRAFT_207585 [Branchiostoma floridae]
Length = 235
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
V +F C CDY + HT + G+K +KC +C Y A +K+ L+ H+ +KH+++
Sbjct: 5 VDRRFECTECDYRPAKKVKLSRHTRKYTGEKPYKCDICDYSAAKKDHLESHM-DKHTSEK 63
Query: 143 K 143
+
Sbjct: 64 R 64
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+F+CV C Y T ++ H H G+K ++C C Y A K +L H+ KH+ + K
Sbjct: 64 RFMCVECGYRTSHKSHLTAHMRTHTGEKPYRCDQCDYSATHKSQLDRHM-AKHTGEKK 120
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY T N+ H H G+K++ C C Y + + L+ H+
Sbjct: 149 YKCDQCDYSTAQRGNLDRHMAKHTGEKRYICGECGYRSADRSALKSHM 196
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M V P C C T+ NL M + K ++IC C Y +
Sbjct: 139 HMRTHTGVKPYKCDQCDYSTAQRGNLDRH-------MAKHTGEK-RYICGECGYRSADRS 190
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+++H + H G K + C C Y A +K L H+
Sbjct: 191 ALKSHMVKHTGVKPYTCDYCDYSAARKFHLDRHM 224
>gi|260823076|ref|XP_002604009.1| hypothetical protein BRAFLDRAFT_119786 [Branchiostoma floridae]
gi|229289334|gb|EEN60020.1| hypothetical protein BRAFLDRAFT_119786 [Branchiostoma floridae]
Length = 786
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T+ + H IH G+K +KC C Y A +K L H++
Sbjct: 170 YMCGECGYRTVEKSTLSRHMRIHTGEKPYKCDQCDYSATEKSSLVKHIR 218
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y Q++ H H G+K +KC C Y A QK L H+
Sbjct: 282 FMCGECGYRAAQWQHLYRHMRTHTGEKPYKCEQCDYSAAQKGHLDRHL 329
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T +++ H H G+K +KC C Y A +K L H KHS
Sbjct: 113 YMCGECGFRTTHKESLFRHMRTHTGEKPYKCDQCDYSAARKSTLDNHTVAKHS 165
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++++ + L++H +R + ++C C + T +
Sbjct: 188 HMRIHTGEKPYKCDQC-DYSATEKSSLVKH-------IRKHTGEKPYMCGECGFRTAMKC 239
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+ H H G+K +KC C Y A K L H++
Sbjct: 240 NLSVHIRSHTGEKPYKCDQCEYSAAHKSTLDQHLE 274
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y T ++ H H G+K +KC C Y A QK L HV
Sbjct: 590 YKCDQCGYRTAWKSHLSQHMRTHTGEKPYKCDQCDYSAAQKSTLDQHV 637
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY + H H G+K + C C + A +K +L H++
Sbjct: 674 FKCDQCDYSAAHKSTLDEHVTTHTGEKPYMCGECGFRATRKSELSRHMR 722
>gi|260806392|ref|XP_002598068.1| hypothetical protein BRAFLDRAFT_85716 [Branchiostoma floridae]
gi|229283339|gb|EEN54080.1| hypothetical protein BRAFLDRAFT_85716 [Branchiostoma floridae]
Length = 355
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C + T ++ H H GDK +KC +C Y A +K L H+ +H+++
Sbjct: 231 YMCGECGHRTAQKADLAKHMRTHTGDKPYKCHMCDYSAARKFSLDNHMAARHASE 285
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C Y T + H H G+K +KC C Y A K L +HV KHS
Sbjct: 288 YPCKECGYRTTQKPTLLRHMRTHTGEKPYKCDQCDYSAAVKVNLDYHVAAKHS 340
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C CDY + ++ H H G+K FKC C + A K + +H+ KHS
Sbjct: 114 YKCDQCDYSAALKSSLNRHIAAKHTGEKPFKCDQCDFAAITKSHIDYHIAAKHS 167
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C Y T + H H G+K +KC C Y A K L H+ KH+
Sbjct: 88 CGECGYRTTQKSELSRHMRTHTGEKPYKCDQCDYSAALKSSLNRHIAAKHT 138
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
++C C Y T + H H G+K +KC C Y A +K L H+ KH+ D
Sbjct: 172 YMCGECGYRTAQKSRLSRHMRTHTGEKPYKCDQCDYSATEKFNLDKHLA-KHTGDTGD 228
>gi|260782896|ref|XP_002586516.1| hypothetical protein BRAFLDRAFT_170708 [Branchiostoma floridae]
gi|229271631|gb|EEN42527.1| hypothetical protein BRAFLDRAFT_170708 [Branchiostoma floridae]
Length = 196
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H GDK +KC C Y A K L H+
Sbjct: 62 YMCGECGYMTALKSDLSKHMRTHTGDKPYKCDQCDYSAAHKSNLNRHL 109
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H GDK +KC C Y A K L H+
Sbjct: 6 YMCGECGYMTALKSDLSKHMRTHTGDKPYKCDQCDYSAAHKSNLNQHL 53
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ H +H GDK + C C Y QK L H++
Sbjct: 90 YKCDQCDYSAAHKSNLNRHLAMHTGDKPYMCGECGYRTTQKSHLVEHMR 138
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++ + L+EH +R + + C CD+ T N+ H +H
Sbjct: 117 PYMCGEC-GYRTTQKSHLVEH-------MRTHTAEKPYKCDHCDFSTAHKSNLNRHLAMH 168
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K + C C Y K L H++
Sbjct: 169 TGEKPYMCGECGYRTAHKSHLSQHMR 194
>gi|260781338|ref|XP_002585774.1| hypothetical protein BRAFLDRAFT_257354 [Branchiostoma floridae]
gi|229270815|gb|EEN41785.1| hypothetical protein BRAFLDRAFT_257354 [Branchiostoma floridae]
Length = 369
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L +H+ P ++C C Y
Sbjct: 225 HMRTHTGEKPYKCDQCDYSAAQKANLDLHLTKHTGEKP-----------YMCGECGYRAA 273
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G+K FKC C+Y A QK L H+
Sbjct: 274 CKSNLSRHMKTHTGEKPFKCDQCNYSAAQKSSLDKHL 310
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C + T ++ H H G+K +KC C Y A +K L H+
Sbjct: 10 FMCGECGFRTAKKSHLSRHMRTHTGEKPYKCDQCDYSAARKSHLDRHL 57
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C C Y T + + H H G+K +KC C Y A QK L H+
Sbjct: 209 CDYCGYRTNLKSTLSKHMRTHTGEKPYKCDQCDYSAAQKANLDLHL 254
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H G+K +KC C Y A +K L H+
Sbjct: 120 YMCGECGYRAAQKSHLSKHMRTHTGEKPYKCDQCDYSAARKSLLDIHL 167
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C T + NH H G+K +KC C Y A +K L+ H+
Sbjct: 319 YMCGECGLRTAQKFTLLNHMRTHTGEKPYKCDQCDYSAARKSTLEDHI 366
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 12/119 (10%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
C C S D+FI +M P C C ++ NL S++
Sbjct: 178 CGECGYRTASKSDLFI-------HMRTHTGDKPYKCDQC-DYCGYRTNLKSTLSKHMRTH 229
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
P K C CDY N+ H H G+K + C C Y A K L H+K
Sbjct: 230 TGEKPYK----CDQCDYSAAQKANLDLHLTKHTGEKPYMCGECGYRAACKSNLSRHMKT 284
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQN 101
M +N+ P C C F ++ + L H +R + + C CDY +
Sbjct: 1 MPEVNTEKPFMCGEC-GFRTAKKSHLSRH-------MRTHTGEKPYKCDQCDYSAARKSH 52
Query: 102 MRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ H H G+K + C C Y +K L H+K
Sbjct: 53 LDRHLTKHTGEKPYMCGECGYRTARKSHLSRHMKT 87
>gi|260781011|ref|XP_002585622.1| hypothetical protein BRAFLDRAFT_149266 [Branchiostoma floridae]
gi|229270640|gb|EEN41633.1| hypothetical protein BRAFLDRAFT_149266 [Branchiostoma floridae]
Length = 294
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T + H H G++ +KC LC+Y A QK L H+ KH+ +
Sbjct: 13 YMCGECGYRTEHKSGLSIHMRTHTGERPYKCDLCNYSAVQKANLDQHLAAKHTGE 67
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 11/70 (15%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
N L++HS P ++C C Y T ++ H IH G+K +KC C Y A
Sbjct: 115 NHLLKHSGEKP-----------YMCGECGYRTARKFHLSLHMRIHTGEKPYKCDQCDYSA 163
Query: 125 YQKEKLQFHV 134
QK L H+
Sbjct: 164 AQKCDLDKHL 173
>gi|260790752|ref|XP_002590405.1| hypothetical protein BRAFLDRAFT_201071 [Branchiostoma floridae]
gi|229275598|gb|EEN46416.1| hypothetical protein BRAFLDRAFT_201071 [Branchiostoma floridae]
Length = 408
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 16/119 (13%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
C C+ P+ D+ H +T SF+ + C + + + V+ + H ++ P
Sbjct: 272 CSECDYRAPTKFDL-DRHVKTHAKRSFM----CEKCGYMTRYKCALVSHMATHMQDKP-- 324
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY T N+R H H G K+F C C + A K L+ H+K
Sbjct: 325 ---------FKCGKCDYKTAWKSNLRGHMETHTGRKRFCCEKCDFKASWKSNLRAHMKT 374
>gi|226572|prf||1602245A ZFX gene
Length = 804
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 520 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 568
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 569 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 602
>gi|395753770|ref|XP_003779656.1| PREDICTED: zinc finger X-chromosomal protein [Pongo abelii]
Length = 841
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 557 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 605
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 606 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 639
>gi|195500012|ref|XP_002097192.1| GE26086 [Drosophila yakuba]
gi|194183293|gb|EDW96904.1| GE26086 [Drosophila yakuba]
Length = 447
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 14/132 (10%)
Query: 10 VPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLME 69
VP TK C +C++ S HC + +N + C CK+ + + LL
Sbjct: 221 VPPDTKFVCDHCDEGFRSAA-ALTRHC------NIVNLPLKHPCSTCKSKFHNKI-LLQT 272
Query: 70 HSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEK 129
H E CP P + +C C + N++NH + H G + KC CS Y +
Sbjct: 273 HKERCP-----RPAASQHVCHICGKRLTTAFNLKNHLVRHAGKRPHKCDQCSASFYTAAE 327
Query: 130 LQFHVKNKHSTK 141
L H K H+T+
Sbjct: 328 LCSHQKT-HTTE 338
>gi|38020|emb|CAA42416.1| ZFX product, isoform 1 [Homo sapiens]
Length = 575
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 291 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 339
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 340 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 373
>gi|410055368|ref|XP_003953835.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 404
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 80 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 128
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 79 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 130
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 131 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 163
>gi|223460372|gb|AAI36310.1| ZFX protein [Homo sapiens]
Length = 844
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 560 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 608
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 609 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 642
>gi|260805376|ref|XP_002597563.1| hypothetical protein BRAFLDRAFT_225927 [Branchiostoma floridae]
gi|229282828|gb|EEN53575.1| hypothetical protein BRAFLDRAFT_225927 [Branchiostoma floridae]
Length = 310
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C +C NFTS+ N + H M + K F C C Y T + H L H
Sbjct: 174 PYKCLYC-NFTSARKNSVDIH------MAKHTGEK-PFACDQCSYRTADKPCLVRHMLTH 225
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
GDK++KC LC Y + +K +Q H+
Sbjct: 226 NGDKRYKCHLCDYVSVRKSDVQVHI 250
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
CLYCN V I +M+ P +C C ++ ++D L+ H M
Sbjct: 177 CLYCNFTSARKNSVDI-------HMAKHTGEKPFACDQC-SYRTADKPCLVRH------M 222
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ + K ++ C CDY ++ +++ H + H G+K F C +C+Y + L H+K
Sbjct: 223 LTHNGDK-RYKCHLCDYVSVRKSDVQVHIVKHSGEKPFACGVCNYRTAYRPCLAQHMKT 280
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
IC C + T+ N+++H H G+K F C +C Y + L H K+
Sbjct: 91 ICRECGFSTVNKYNLQSHIRTHTGEKPFVCDVCGYRTGDRSTLTKHRKS 139
>gi|260791392|ref|XP_002590713.1| hypothetical protein BRAFLDRAFT_89519 [Branchiostoma floridae]
gi|229275909|gb|EEN46724.1| hypothetical protein BRAFLDRAFT_89519 [Branchiostoma floridae]
Length = 745
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++D + L H +R + + C CDY ++ H + H
Sbjct: 336 PYMCGEC-GYRTADRSSLSRH-------LRIHTGEKPYKCDQCDYSAAEKSKIKQHQVKH 387
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G+K + C C Y A QK L H+ KH+ K
Sbjct: 388 TGEKPYMCDRCDYSAAQKISLDSHIAAKHTNK 419
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +F+++ N + H + + ++C C Y T
Sbjct: 440 HMRTHTGERPYKCDQC-DFSAAHKNTMDSH-------LTKHTGEKPYMCGECGYRTADGS 491
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++ H H G+K +KC C Y A +K KL+ H
Sbjct: 492 SLSRHLRTHTGEKTYKCDQCDYSAAEKSKLKQH 524
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T ++ H IH G+K + C C Y A QK L H+ KHS
Sbjct: 225 YMCGECGYRTAHKSHLSVHMRIHTGEKLYMCDQCDYSAAQKSSLDQHL-TKHS 276
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C C Y M H H G++ +KC C Y A QK L HV+
Sbjct: 649 YTCEECGYRATQKSCMYRHMRTHTGERPYKCDQCDYSAGQKSTLNQHVRK 698
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H GDK +KC C Y A K HV
Sbjct: 169 YMCGECGYRTAEKCNLSRHIRTHTGDKPYKCDQCDYSAALKSTSHQHV 216
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + H H G+K +KC C Y A +K L H KH+
Sbjct: 56 YMCEECGYRAARKSTLSKHMRSHTGEKPYKCDQCDYSAARKSSLDSHHTVKHT 108
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+R + + C CDY + + H IH G+K + C C Y K KL H++
Sbjct: 584 IRTHTGEKPYKCDQCDYSAALKSTLDRHLAIHTGEKPYICDECGYRFISKSKLTTHMRTH 643
Query: 138 HSTK 141
S K
Sbjct: 644 TSEK 647
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + + H H G+K + C C Y A +K L H+++
Sbjct: 28 YKCDQCDYSAAVKSTLDQHIAKHTGEKPYMCEECGYRAARKSTLSKHMRS 77
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++D + L H +R + + C CDY ++ H + H
Sbjct: 477 PYMCGEC-GYRTADGSSLSRH-------LRTHTGEKTYKCDQCDYSAAEKSKLKQHQVKH 528
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K + C C Y K L H++
Sbjct: 529 TGEKPYMCGECGYRTAYKANLSSHMRT 555
>gi|340434|gb|AAA61309.1| zinc finger protein [Homo sapiens]
Length = 805
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 521 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 569
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 570 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 603
>gi|71061446|ref|NP_003401.2| zinc finger X-chromosomal protein isoform 1 [Homo sapiens]
gi|296010878|ref|NP_001171555.1| zinc finger X-chromosomal protein isoform 1 [Homo sapiens]
gi|296010880|ref|NP_001171556.1| zinc finger X-chromosomal protein isoform 1 [Homo sapiens]
gi|68844748|sp|P17010.2|ZFX_HUMAN RecName: Full=Zinc finger X-chromosomal protein
gi|119619419|gb|EAW99013.1| zinc finger protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119619420|gb|EAW99014.1| zinc finger protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119619421|gb|EAW99015.1| zinc finger protein, X-linked, isoform CRA_a [Homo sapiens]
gi|208965704|dbj|BAG72866.1| X-linked zinc finger protein [synthetic construct]
Length = 805
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 521 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 569
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 570 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 603
>gi|297709586|ref|XP_002831509.1| PREDICTED: zinc finger X-chromosomal protein isoform 1 [Pongo
abelii]
gi|297709588|ref|XP_002831510.1| PREDICTED: zinc finger X-chromosomal protein isoform 2 [Pongo
abelii]
Length = 802
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 518 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 566
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 567 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 600
>gi|260792108|ref|XP_002591069.1| hypothetical protein BRAFLDRAFT_69376 [Branchiostoma floridae]
gi|229276269|gb|EEN47080.1| hypothetical protein BRAFLDRAFT_69376 [Branchiostoma floridae]
Length = 444
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F+C C + T M NH +H+G+K F C C Y A K L+ H+K K
Sbjct: 91 FMCGECGHRTDRKSAMDNHMKVHIGEKHFACEKCEYRAGSKGDLKRHMKTHAGEKT 146
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
++ P+K C CDY T+ ++ H L H +K FKC C + +KE L+ H +
Sbjct: 325 LKEKPIK----CELCDYRTVSQWRLKPHMLTHTEEKPFKCGKCDFKTARKEHLKRHTETH 380
Query: 138 HSTKVK 143
T+ K
Sbjct: 381 SQTQKK 386
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 6/97 (6%)
Query: 40 PNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
P+M P C C +F ++ L H+E K F C CDY
Sbjct: 347 PHMLTHTEEKPFKCGKC-DFKTARKEHLKRHTE-----THSQTQKKPFHCEHCDYKAAER 400
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ H H G++ + C C Y A Q+ L+ H++
Sbjct: 401 CKLERHMTTHTGERPYACDKCDYRAAQRGTLKQHLET 437
>gi|260808227|ref|XP_002598909.1| hypothetical protein BRAFLDRAFT_58822 [Branchiostoma floridae]
gi|229284184|gb|EEN54921.1| hypothetical protein BRAFLDRAFT_58822 [Branchiostoma floridae]
Length = 591
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + NL L +H+ P ++C C Y
Sbjct: 18 HMRTHTGEKPYKCDQCDYSAAQKANLDLHLTKHTGEKP-----------YMCGECGYRAA 66
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G+K FKC C+Y A QK L H+
Sbjct: 67 CKSNLSRHMKTHTGEKPFKCDQCNYSAAQKSSLDKHL 103
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C T+ NL L +H+ P +IC C + T N+ H
Sbjct: 282 PLKCNQCDYVTAWKSNLNRHLTKHTGAKP-----------YICEECGHRTAHKFNLSVHM 330
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H GD+ +KC LC Y A QK H+
Sbjct: 331 RTHTGDRPYKCDLCDYSAAQKGNFDSHL 358
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T + + H H G+K +KC C Y A QK L H+
Sbjct: 1 MCGECGYRTNLKSTLSKHMRTHTGEKPYKCDQCDYSAAQKANLDLHL 47
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + NM H L H G+K + C C Y A + L H++
Sbjct: 423 YKCDQCDYSAALKSNMDIHLLKHTGEKPYMCGECGYRAAHRSDLNRHMR 471
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 47 SVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C+ C + T+ NL + +R + C CDY N +H
Sbjct: 307 GAKPYICEECGHRTAHKFNLSVH--------MRTHTGDRPYKCDLCDYSAAQKGNFDSHL 358
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K + C C Y A K L H++
Sbjct: 359 ATHTGEKPYMCGECGYRAAHKSDLSRHLR 387
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y ++ H H G+K +KC C Y A K L HV+
Sbjct: 507 YMCGECGYRAAHKSDLSRHMRTHTGEKPYKCDQCDYSAAHKSNLSNHVR 555
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H G+K +KC C Y A QK L H+
Sbjct: 451 YMCGECGYRAAHRSDLNRHMRTHTGEKPYKCDQCDYSAAQKGHLDSHL 498
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY N+ NH IH G K + C C Y +K L H++
Sbjct: 535 YKCDQCDYSAAHKSNLSNHVRIHTGYKPYMCGECGYRTGRKSDLSRHMR 583
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C T + NH H G+K +KC C Y A +K L+ H+
Sbjct: 112 YMCGECGLRTAQKFTLLNHMRTHTGEKPYKCDQCDYSAARKSTLEDHI 159
>gi|260814396|ref|XP_002601901.1| hypothetical protein BRAFLDRAFT_86384 [Branchiostoma floridae]
gi|229287204|gb|EEN57913.1| hypothetical protein BRAFLDRAFT_86384 [Branchiostoma floridae]
Length = 801
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 15/90 (16%)
Query: 53 CKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
C HCK T L +++H+ P F C CD+ + H +H
Sbjct: 575 CPHCKYSTMYKSILDRHVIQHTGEKP-----------FTCTECDFKATQKAILARHMRVH 623
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K +KC C Y A QK L H+ KH+
Sbjct: 624 TGEKPYKCTQCDYSAAQKTNLDSHMA-KHT 652
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C CD+ T Q++ H H G+K C C Y +K +L H HS K
Sbjct: 461 YSCTKCDFTTTFKQHLHKHMAKHSGEKPHVCVECGYQTAEKHRLTRHFAASHSGK 515
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 15/93 (16%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + NL + +H+ + P ++C C Y T+ + H
Sbjct: 628 PYKCTQCDYSAAQKTNLDSHMAKHTGDKP-----------YMCEDCGYRTVHRSYLAKHR 676
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
IH GDK +KC C + A ++ L H+ KH+
Sbjct: 677 KIHTGDKPYKCKQCPFSASTQQGLDKHM-GKHT 708
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T N+ H +H+ DK +KC C Y K L HV
Sbjct: 545 YMCHQCGFRTAQKYNLSRHMSVHVTDKTYKCPHCKYSTMYKSILDRHV 592
>gi|351709264|gb|EHB12183.1| Zinc finger X-chromosomal protein [Heterocephalus glaber]
Length = 781
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 497 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 545
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 546 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 579
>gi|332224104|ref|XP_003261206.1| PREDICTED: zinc finger X-chromosomal protein isoform 4 [Nomascus
leucogenys]
Length = 576
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 292 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 340
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 341 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 374
>gi|296010882|ref|NP_001171557.1| zinc finger X-chromosomal protein isoform 2 [Homo sapiens]
Length = 576
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 292 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 340
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 341 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 374
>gi|260815817|ref|XP_002602669.1| hypothetical protein BRAFLDRAFT_72962 [Branchiostoma floridae]
gi|229287980|gb|EEN58681.1| hypothetical protein BRAFLDRAFT_72962 [Branchiostoma floridae]
Length = 480
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++T+S + + H + RP ++C C + + +
Sbjct: 299 HMRTHTGERPYKCDQC-DYTASSYSTMDSHKKR-HTGERP------YVCELCGHRSKVKG 350
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H ++H G+KQ+KC LC + A K L H+
Sbjct: 351 DLNRHMVLHTGEKQYKCNLCDFSAIWKASLDAHL 384
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
F+C C + T + N+ H H G+K +C C Y + +K L H KH+T
Sbjct: 165 FMCGECGFRTALKHNLAQHMRTHTGEKPHQCDQCEYASLKKSDLNRHHLVKHNT 218
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+F C C+Y T + + H ++H G+K + C C Y A +K L H + H+
Sbjct: 223 RFKCNQCEYKTNLKALLSQHLVMHTGEKPYMCGECGYKAAKKFSLLQHTRAHHT 276
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+F+C C Y T+ M H H G++ +KC C Y A + H K
Sbjct: 280 RFMCGECGYRTVYKNAMFKHMRTHTGERPYKCDQCDYTASSYSTMDSHKKR 330
>gi|114688024|ref|XP_520979.2| PREDICTED: zinc finger X-chromosomal protein isoform 3 [Pan
troglodytes]
gi|397497669|ref|XP_003819628.1| PREDICTED: zinc finger X-chromosomal protein isoform 1 [Pan
paniscus]
Length = 802
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 518 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 566
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 567 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 600
>gi|397497671|ref|XP_003819629.1| PREDICTED: zinc finger X-chromosomal protein isoform 2 [Pan
paniscus]
Length = 841
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 557 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 605
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 606 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 639
>gi|358417009|ref|XP_002702020.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 91, partial
[Bos taurus]
Length = 1448
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 56 CKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQF 115
CK F+ D N +M SE P + YK C CD + + H IH G K +
Sbjct: 241 CKGFSHKDENAVMHPSELLPDHETQNKRPYK--CNECDITFLQDSELTRHQRIHTGGKPY 298
Query: 116 KCCLCSYGAYQKEKLQFHVK 135
KC +C Q KL H +
Sbjct: 299 KCDVCGKAFNQTRKLAIHWR 318
>gi|338729065|ref|XP_003365816.1| PREDICTED: zinc finger X-chromosomal protein-like isoform 2 [Equus
caballus]
Length = 610
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 326 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 374
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 375 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 408
>gi|260823062|ref|XP_002604002.1| hypothetical protein BRAFLDRAFT_57770 [Branchiostoma floridae]
gi|229289327|gb|EEN60013.1| hypothetical protein BRAFLDRAFT_57770 [Branchiostoma floridae]
Length = 489
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++++ + L++H R K ++C C + T
Sbjct: 396 HMRTHTGEKPYKCDQC-DYSAAEKHHLIDH------QTRHTGEK-PYMCGECGFRTAHRS 447
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
+ H IH G+K +KC C Y A +K L HV+ KH++K+
Sbjct: 448 TLSIHMRIHTGEKPYKCDQCDYSAAEKSSLNRHVR-KHTSKM 488
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + NL S + R P K C CDY I N++ H + H
Sbjct: 321 PYMCGECGYRATVKTNL----SRHMRTHTREKPYK----CDQCDYSAIDKSNLKQHQVKH 372
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K + C C YG + L H++
Sbjct: 373 TGEKPYICGECGYGTVYRSHLSRHMRT 399
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVAC 92
C +M P +C C + +L L++H+ P ++C C
Sbjct: 223 CHLSRHMRTHTGERPYTCDQCDYSAAQKGDLDKHLVKHTGEKP-----------YMCGEC 271
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
Y ++ H IH G+K +KC C Y A +K L H++
Sbjct: 272 GYRATQKSDLSKHMRIHTGEKPYKCDQCDYSATEKYTLAKHIR 314
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+IC C Y T+ ++ H H G+K +KC C Y A +K L H
Sbjct: 378 YICGECGYGTVYRSHLSRHMRTHTGEKPYKCDQCDYSAAEKHHLIDH 424
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C + NL+ +R + ++C C Y TI+
Sbjct: 32 HMRTHTGEKPYKCDQCDYSVAVKSNLVNH--------IRKHTGEKPYMCGECGYRTILKS 83
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++ H H G+K + C C + A +K L H++
Sbjct: 84 DLSRHLRTHTGEKPYMCGECGFKAARKSYLSTHMR 118
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + + H IH GDK +KC C Y A K L+ HV
Sbjct: 98 YMCGECGFKAARKSYLSTHMRIHTGDKPYKCDQCDYSAAHKSSLEQHV 145
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L +H V + +IC C Y T
Sbjct: 116 HMRIHTGDKPYKCDQC-DYSAAHKSSLEQH-------VAKHTGEKPYICGECGYRTAQKS 167
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++ H H G+K ++C C Y A +K L H +
Sbjct: 168 DLATHMRTHTGEKPYQCDQCDYSAARKSNLDKHQR 202
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + N+ NH H G+K + C C Y K L H++
Sbjct: 42 YKCDQCDYSVAVKSNLVNHIRKHTGEKPYMCGECGYRTILKSDLSRHLRT 91
>gi|410988282|ref|XP_004000415.1| PREDICTED: zinc finger X-chromosomal protein isoform 2 [Felis
catus]
Length = 609
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 325 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 373
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 374 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 407
>gi|410219178|gb|JAA06808.1| zinc finger protein, X-linked [Pan troglodytes]
Length = 803
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 519 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 567
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 568 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 601
>gi|410055370|ref|XP_003953836.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 299
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 80 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 128
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 79 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 130
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 131 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 163
>gi|355569124|gb|EHH25360.1| Zinc finger X-chromosomal protein, partial [Macaca mulatta]
Length = 598
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 314 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 362
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 363 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 396
>gi|359324149|ref|XP_003640297.1| PREDICTED: zinc finger X-chromosomal protein-like isoform 3 [Canis
lupus familiaris]
Length = 576
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 292 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 340
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 341 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 374
>gi|335305788|ref|XP_003360294.1| PREDICTED: zinc finger X-chromosomal protein isoform 2 [Sus scrofa]
Length = 610
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 326 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 374
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 375 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 408
>gi|260825692|ref|XP_002607800.1| hypothetical protein BRAFLDRAFT_199602 [Branchiostoma floridae]
gi|229293149|gb|EEN63810.1| hypothetical protein BRAFLDRAFT_199602 [Branchiostoma floridae]
Length = 387
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 56 CKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQF 115
C ++ D + L++H VR + + C C + I +Q++++H IH G++ +
Sbjct: 230 CCDYACCDRSSLVKH-------VRIHTGERPYKCPHCPFAAIRNQDLKDHINIHTGERPY 282
Query: 116 KCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
KC C Y A + L+ H K KH K +
Sbjct: 283 KCTQCLYAAADRSTLRTHTK-KHDRKAR 309
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
C C Y + S +++ H H G++ FKC C Y A +KE L H KH
Sbjct: 3 CPYCQYLAMKSSHLKRHVRKHTGERPFKCPHCKYSAMRKEHLLRHFGFKH 52
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+R + F C C Y ++ H H GDK +KC LC + + Q+ L H++
Sbjct: 161 IRAHTGERPFTCPQCSYRGARKDSLVRHMRTHTGDKPYKCPLCDFASAQQGHLVTHIRT 219
>gi|38022|emb|CAA42417.1| ZFX product, isoform 2 [Homo sapiens]
gi|38024|emb|CAA42418.1| ZFX product, isoform 3 [Homo sapiens]
Length = 804
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 520 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 568
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 569 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 602
>gi|426395419|ref|XP_004063970.1| PREDICTED: zinc finger X-chromosomal protein isoform 2 [Gorilla
gorilla gorilla]
Length = 841
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 557 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 605
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 606 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 639
>gi|403296129|ref|XP_003938972.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 266 [Saimiri
boliviensis boliviensis]
Length = 671
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Query: 50 PQSCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
P CK C K F S + L EH VR + F CV C IS N+ H I
Sbjct: 501 PYECKECGKAFARS--SRLSEH-------VRTHTGEKPFECVKCGKAFAISSNLSGHLRI 551
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
H G+K F+C C L H++ HSTK
Sbjct: 552 HTGEKPFECLECGKAFTHSSSLNNHMRT-HSTK 583
>gi|403263655|ref|XP_003924134.1| PREDICTED: zinc finger X-chromosomal protein isoform 1 [Saimiri
boliviensis boliviensis]
Length = 804
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 520 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 568
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 569 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 602
>gi|348561315|ref|XP_003466458.1| PREDICTED: zinc finger X-chromosomal protein-like isoform 2 [Cavia
porcellus]
Length = 791
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 507 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 555
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 556 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 589
>gi|332860443|ref|XP_003317438.1| PREDICTED: zinc finger X-chromosomal protein isoform 1 [Pan
troglodytes]
Length = 841
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 557 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 605
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 606 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 639
>gi|291407239|ref|XP_002720029.1| PREDICTED: Zinc finger X-chromosomal protein-like isoform 2
[Oryctolagus cuniculus]
Length = 723
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 439 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 487
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 488 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 521
>gi|410219170|gb|JAA06804.1| zinc finger protein, X-linked [Pan troglodytes]
gi|410306662|gb|JAA31931.1| zinc finger protein, Y-linked [Pan troglodytes]
gi|410306668|gb|JAA31934.1| zinc finger protein, Y-linked [Pan troglodytes]
gi|410306672|gb|JAA31936.1| zinc finger protein, Y-linked [Pan troglodytes]
Length = 801
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 599
>gi|402909724|ref|XP_003917560.1| PREDICTED: zinc finger X-chromosomal protein [Papio anubis]
gi|441673343|ref|XP_004092430.1| PREDICTED: zinc finger X-chromosomal protein [Nomascus leucogenys]
Length = 609
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 325 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 373
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 374 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 407
>gi|357623466|gb|EHJ74603.1| putative zinc finger protein 45-like protein [Danaus plexippus]
Length = 305
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
KF+C C+Y T S+++ H + H GD+ +KC LC Q+ LQ H + H+
Sbjct: 49 KFVCKICNYVTHRSKDLSAHLVTHSGDRPYKCDLCPKRFTQQSSLQNHKEQTHN 102
>gi|359324147|ref|XP_003640296.1| PREDICTED: zinc finger X-chromosomal protein-like isoform 2 [Canis
lupus familiaris]
Length = 610
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 326 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 374
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 375 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 408
>gi|332860445|ref|XP_003317439.1| PREDICTED: zinc finger X-chromosomal protein isoform 2 [Pan
troglodytes]
Length = 777
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 493 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 541
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 542 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 575
>gi|260823038|ref|XP_002603990.1| hypothetical protein BRAFLDRAFT_71722 [Branchiostoma floridae]
gi|229289315|gb|EEN60001.1| hypothetical protein BRAFLDRAFT_71722 [Branchiostoma floridae]
Length = 919
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H H GDK++ C C Y A+QK L H++
Sbjct: 696 YKCDQCDYSAAHKSSLEQHVAKHTGDKRYMCGECGYRAFQKSDLSKHMR 744
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T ++ H IH G+K +KC C Y A QK L HV KH+
Sbjct: 185 YMCGECGYRTAHKSDLTIHMRIHTGEKPYKCDQCDYSAVQKSALNQHV-GKHT 236
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C+ C +++++ + L++H +R ++C C Y T
Sbjct: 826 HMKTHTGEKPYKCEQC-GYSAAEKSNLVKH-------IRKHTGDKPYMCGECGYRTAFKS 877
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++ H H GDK +KC C Y A K L H + H++K+
Sbjct: 878 SLYTHLRTHTGDKPYKCDQCDYSAVDKFSLNRHERT-HTSKM 918
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + H IH GDK +KC C Y A K L+ HV
Sbjct: 668 YMCGECGYKAARKSYLSTHMRIHTGDKPYKCDQCDYSAAHKSSLEQHV 715
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C + T N+ H IH G+K +KC C Y A K L+ HV KHS
Sbjct: 241 YMCGECGFRTAQKCNLSVHMRIHTGEKPYKCDQCDYSAAHKSSLEQHVA-KHS 292
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+++C C Y ++ H H G+K FKC C Y A K L H+ KH++K
Sbjct: 723 RYMCGECGYRAFQKSDLSKHMRTHTGEKPFKCNQCDYSAAVKSTLYKHLA-KHTSK 777
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYF 95
C +M P C C +++++D L H +R + ++C C Y
Sbjct: 310 CHLSRHMRTHTGEKPYKCDRC-DYSAADKLTLDIH-------LRSHTGEKPYMCGECGYR 361
Query: 96 TIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++ H H G++ +KC C Y A QK L H +
Sbjct: 362 ATQKAHLSRHMRTHTGERPYKCDQCDYSATQKSSLDRHQR 401
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T + H H G+K +KC C Y A +K L H++
Sbjct: 808 YMCGKCGYRTARRGRLSLHMKTHTGEKPYKCEQCGYSAAEKSNLVKHIR 856
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++C C Y T ++ H H G+K +KC C Y A K L H+++
Sbjct: 297 YMCWECGYRTAKKCHLSRHMRTHTGEKPYKCDRCDYSAADKLTLDIHLRS 346
>gi|171474913|gb|ACB47397.1| brother of regulator of imprinted sites [Pogona vitticeps]
Length = 520
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+R + + C C Y + + ++ H + H G+K F+C +C Q L+FH+ +K
Sbjct: 281 IRSHTGERPYHCTLCSYASRDTYKLKRHMVTHSGEKPFECLICKARFTQAGTLKFHILHK 340
Query: 138 HSTKV 142
H T V
Sbjct: 341 HETNV 345
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+F C C+Y ++M H H G+K F C CS QK+ L+ H K H + K
Sbjct: 405 RFKCDQCNYACKQERHMVIHKWTHTGEKPFVCVACSKCFRQKQLLRVHFKKHHDSSFK 462
>gi|410306670|gb|JAA31935.1| zinc finger protein, Y-linked [Pan troglodytes]
Length = 801
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 599
>gi|410306666|gb|JAA31933.1| zinc finger protein, Y-linked [Pan troglodytes]
Length = 801
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 599
>gi|344288513|ref|XP_003415994.1| PREDICTED: zinc finger X-chromosomal protein-like [Loxodonta
africana]
Length = 800
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 598
>gi|219520655|gb|AAI36309.1| ZFX protein [Homo sapiens]
Length = 844
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 560 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 608
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 609 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 642
>gi|260823122|ref|XP_002604032.1| hypothetical protein BRAFLDRAFT_71678 [Branchiostoma floridae]
gi|229289357|gb|EEN60043.1| hypothetical protein BRAFLDRAFT_71678 [Branchiostoma floridae]
Length = 235
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++D + L+ H +V+ K ++C C Y T
Sbjct: 116 HMRTHTGERPYKCGQC-DYSAADKSTLVLH------LVKHTGEK-PYMCGECGYRTAQKS 167
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G+K +KC C Y + QK +L H+
Sbjct: 168 NLTKHMRTHTGEKPYKCNQCDYSSAQKGQLDQHL 201
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C C Y T + H H G++ +KC C Y A K L H+
Sbjct: 98 FKCRECGYSTAYQSQLFRHMRTHTGERPYKCGQCDYSAADKSTLVLHL 145
>gi|332224100|ref|XP_003261204.1| PREDICTED: zinc finger X-chromosomal protein isoform 2 [Nomascus
leucogenys]
gi|332224102|ref|XP_003261205.1| PREDICTED: zinc finger X-chromosomal protein isoform 3 [Nomascus
leucogenys]
gi|441673337|ref|XP_004092429.1| PREDICTED: zinc finger X-chromosomal protein [Nomascus leucogenys]
Length = 802
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 518 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 566
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 567 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 600
>gi|392933947|ref|NP_001255983.1| transcriptional repressor CTCFL isoform 12 [Homo sapiens]
gi|111550168|gb|ABH10106.1| BORIS transcription factor transcript variant B2 [Homo sapiens]
Length = 403
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 80 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 128
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 79 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 130
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 131 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 163
>gi|431909737|gb|ELK12883.1| Zinc finger X-chromosomal protein [Pteropus alecto]
Length = 798
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 514 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 562
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 563 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 596
>gi|426395417|ref|XP_004063969.1| PREDICTED: zinc finger X-chromosomal protein isoform 1 [Gorilla
gorilla gorilla]
Length = 802
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 518 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 566
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 567 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 600
>gi|426256794|ref|XP_004022022.1| PREDICTED: zinc finger X-chromosomal protein isoform 2 [Ovis aries]
Length = 610
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 326 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 374
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 375 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 408
>gi|410219168|gb|JAA06803.1| zinc finger protein, X-linked [Pan troglodytes]
Length = 800
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 598
>gi|119619422|gb|EAW99016.1| zinc finger protein, X-linked, isoform CRA_b [Homo sapiens]
Length = 758
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 474 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 522
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 523 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 556
>gi|354487146|ref|XP_003505735.1| PREDICTED: zinc finger Y-chromosomal protein isoform 1 [Cricetulus
griseus]
gi|344240145|gb|EGV96248.1| Zinc finger X-chromosomal protein [Cricetulus griseus]
Length = 799
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 515 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 563
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 564 HTGEKPYECQYCEYRSADSSNLKTHVKTKHSKEM 597
>gi|301784334|ref|XP_002927582.1| PREDICTED: zinc finger X-chromosomal protein-like [Ailuropoda
melanoleuca]
Length = 800
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 598
>gi|149642509|ref|XP_001505825.1| PREDICTED: zinc finger protein 518A-like [Ornithorhynchus anatinus]
Length = 1539
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+ C+ F++ DV ++H + R + ++YK C C + + H L+H G
Sbjct: 227 CEKCR-FSTKDVGTFVQH------IHRHNEIQYK--CGQCPQVSFTKGEFQRHLLVHSGT 277
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKH 138
F+C CSY A +K+ L HV H
Sbjct: 278 FSFRCQYCSYSAMRKDHLIKHVIGSH 303
>gi|443734815|gb|ELU18672.1| hypothetical protein CAPTEDRAFT_179609 [Capitella teleta]
Length = 262
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 91 ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
C + ++R H L+H G+K F C LC Y + QK L HV + H K
Sbjct: 58 GCGKLFAGTSSLRRHYLVHTGEKMFTCALCPYSSNQKNNLDRHVFSLHRDK 108
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 87 FICVACDY-FTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
F C C + + S ++R H H G+K +KC +C + + +K+ + H+K KH
Sbjct: 202 FQCPVCPHTWFSASADLRRHMATHTGEKPYKCPVCPHSSNRKDNMDVHIKMKH 254
>gi|410988280|ref|XP_004000414.1| PREDICTED: zinc finger X-chromosomal protein isoform 1 [Felis
catus]
Length = 799
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 515 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 563
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 564 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 597
>gi|410219166|gb|JAA06802.1| zinc finger protein, X-linked [Pan troglodytes]
Length = 799
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 515 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 563
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 564 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 597
>gi|354487150|ref|XP_003505737.1| PREDICTED: zinc finger Y-chromosomal protein isoform 3 [Cricetulus
griseus]
Length = 791
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 507 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 555
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 556 HTGEKPYECQYCEYRSADSSNLKTHVKTKHSKEM 589
>gi|348561313|ref|XP_003466457.1| PREDICTED: zinc finger X-chromosomal protein-like isoform 1 [Cavia
porcellus]
Length = 799
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 515 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 563
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 564 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 597
>gi|260789286|ref|XP_002589678.1| hypothetical protein BRAFLDRAFT_199674 [Branchiostoma floridae]
gi|229274859|gb|EEN45689.1| hypothetical protein BRAFLDRAFT_199674 [Branchiostoma floridae]
Length = 196
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T M H IH G+K F CCLCSY ++ L+ H++
Sbjct: 1 YVCEGCGYRTRCRSTMEVHVRIHTGEKPFGCCLCSYRTTCEKYLRTHMQ 49
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C++C T S L+ +R + +IC C Y T S M H IH
Sbjct: 57 PYVCEYCGYTTGSKPALIGH--------IRIHTGEKPYICDVCGYRTRTSSRMNGHVRIH 108
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFH 133
+ ++C C+Y A +++ L H
Sbjct: 109 TNKRSYRCGQCTYRANRRDSLVRH 132
>gi|260810250|ref|XP_002599916.1| hypothetical protein BRAFLDRAFT_120611 [Branchiostoma floridae]
gi|229285200|gb|EEN55928.1| hypothetical protein BRAFLDRAFT_120611 [Branchiostoma floridae]
Length = 496
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C CDY T ++ H +H G++ + C C Y A +K KL H++ KH
Sbjct: 129 YKCEECDYRTTRHSHVTRHMRLHTGERPYSCQECDYKAKEKAKLNRHIRVKH 180
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 15/118 (12%)
Query: 35 HCQTCPNMSFLNSVIPQSCKHC----KNFTSSDVNLLMEHSENC-------PCMVRPDPV 83
H +M P SC+ C K + ++ ++H +C C P
Sbjct: 141 HSHVTRHMRLHTGERPYSCQECDYKAKEKAKLNRHIRVKHPRDCQNSSKHRKCHKGERP- 199
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
FIC C Y + + H H G+K FKC C+Y K L HVK T+
Sbjct: 200 ---FICGECGYRARLKHRLVEHMRTHTGEKPFKCNHCNYKTSLKRTLDEHVKRHSDTE 254
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 54 KHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDK 113
KH K+ + N+L + R + + F+C C Y + H H G++
Sbjct: 334 KHLKHVQTKGTNMLWS-------LARGNKEEKPFMCGECGYRARHKYQLVGHMRTHTGER 386
Query: 114 QFKCCLCSYGAYQKEKLQFHVKN 136
FKC CSY K L H+K
Sbjct: 387 SFKCNQCSYKTSFKRNLDKHMKR 409
>gi|194227739|ref|XP_001916379.1| PREDICTED: zinc finger X-chromosomal protein-like isoform 1 [Equus
caballus]
Length = 800
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 598
>gi|359324145|ref|XP_003640295.1| PREDICTED: zinc finger X-chromosomal protein-like isoform 1 [Canis
lupus familiaris]
Length = 800
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 598
>gi|268565193|ref|XP_002639365.1| Hypothetical protein CBG03948 [Caenorhabditis briggsae]
Length = 492
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 25/146 (17%)
Query: 7 CLLVPLSTKKTCLYCNK------YVPSDIDVFIGHCQTCPNMSFLNSVIPQ--------- 51
C L P +K+ N+ ++ +D C+ CP F I Q
Sbjct: 351 CQLCPEEEQKSMDPANQQQMQEHFLDKHVDKEKKKCEACPTDQFQPHNIGQHYRFHTNSV 410
Query: 52 -SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
+C+HC N LM H VR + + C C + +R H L+H
Sbjct: 411 YACQHCGKRGRR--NYLMSH-------VRTHTGERPYRCDTCSKSFSDASTLRRHRLVHT 461
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K+++C +C +K+ ++ H+++
Sbjct: 462 GEKKYQCPVCGRAIARKDNVKVHIRS 487
>gi|260787825|ref|XP_002588952.1| hypothetical protein BRAFLDRAFT_89143 [Branchiostoma floridae]
gi|229274124|gb|EEN44963.1| hypothetical protein BRAFLDRAFT_89143 [Branchiostoma floridae]
Length = 426
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T+ ++ H IH G+K +KC C Y A K L HV
Sbjct: 318 YMCGECGYSTVQKSHLSQHMRIHTGEKNYKCDQCDYSAVHKNSLAQHV 365
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A QK L H+
Sbjct: 38 YMCGECGYRTAQKSHLSRHMKTHKGEKPYKCDQCDYSAAQKSHLDRHL 85
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T ++ H H G+K +KC C Y A K L H
Sbjct: 262 YMCGECGYRTARKSDLSQHMRTHTGEKPYKCDQCDYSAAHKSSLDQH 308
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C+Y T + H H +K FKC C Y +K+ L H+
Sbjct: 150 YMCGECEYRTAWESQLSRHMRTHTREKSFKCGQCDYSTSRKDTLDQHL 197
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + + H H GDK + C C Y QK L H++
Sbjct: 374 YKCDRCDYSAALKSALNKHLAKHTGDKPYMCGECGYRTTQKSNLANHMR 422
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H IH G+K ++C C Y A +K L H+
Sbjct: 94 YMCGECGYRTAHKSDLSTHMRIHTGEKPYRCDQCDYSATRKCHLDQHL 141
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+R + ++ C CDY ++ H H G K + C C Y QK L H+K
Sbjct: 1 MRTHTGEKRYKCDQCDYSAARKSSLDQHQAKHTGQKPYMCGECGYRTAQKSHLSRHMK 58
>gi|260781633|ref|XP_002585909.1| hypothetical protein BRAFLDRAFT_116712 [Branchiostoma floridae]
gi|229270975|gb|EEN41920.1| hypothetical protein BRAFLDRAFT_116712 [Branchiostoma floridae]
Length = 315
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C Y T N+ H H G++ + C C Y A Q+ L +H++ KH +K
Sbjct: 261 YKCEECGYRTADKGNLTKHMRCHTGERPYSCQECDYKASQRSSLVWHMRTKHQSK 315
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C C Y T N+ H H G++ + C C Y A Q+ L +H++ KH
Sbjct: 111 YKCEECGYRTADKGNLTKHMRCHTGERPYSCQECDYKASQRSSLVWHMRTKH 162
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 15/98 (15%)
Query: 50 PQSCKHCKNFTSSDVNLL--------MEHSENCPCMVRPDPVKYKFICVACDYFTIISQN 101
P SC+ C S +L+ MEH + +P F+C C Y
Sbjct: 138 PYSCQECDYKASQRSSLVWHMRTKHQMEHRQRHKTGEKP------FMCGECGYRASDRTR 191
Query: 102 MRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ +H H G+K FKC C Y A K L H+K KHS
Sbjct: 192 LVDHVRTHTGEKPFKCNQCHYQASIKSSLVKHMK-KHS 228
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 13/123 (10%)
Query: 17 TCLYCNKYVPSDIDVFIGHCQTCPNMSFLN----SVIPQSCKHCKNFTSSDVNLLMEHSE 72
+C C+ Y S + H +T M P C C + +SD L++H
Sbjct: 140 SCQECD-YKASQRSSLVWHMRTKHQMEHRQRHKTGEKPFMCGEC-GYRASDRTRLVDH-- 195
Query: 73 NCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQF 132
VR + F C C Y I ++ H H ++ ++C LC Y Y+ ++
Sbjct: 196 -----VRTHTGEKPFKCNQCHYQASIKSSLVKHMKKHSDEEPYRCELCEYKTYRGAHIER 250
Query: 133 HVK 135
H+K
Sbjct: 251 HMK 253
>gi|432102098|gb|ELK29913.1| Zinc finger X-chromosomal protein [Myotis davidii]
Length = 796
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 512 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 560
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 561 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 594
>gi|426395421|ref|XP_004063971.1| PREDICTED: zinc finger X-chromosomal protein isoform 3 [Gorilla
gorilla gorilla]
Length = 609
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 325 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 373
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 374 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 407
>gi|410219172|gb|JAA06805.1| zinc finger protein, X-linked [Pan troglodytes]
Length = 800
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 598
>gi|410219160|gb|JAA06799.1| zinc finger protein, X-linked [Pan troglodytes]
gi|410219162|gb|JAA06800.1| zinc finger protein, Y-linked [Pan troglodytes]
gi|410219174|gb|JAA06806.1| zinc finger protein, X-linked [Pan troglodytes]
gi|410219176|gb|JAA06807.1| zinc finger protein, X-linked [Pan troglodytes]
gi|410341515|gb|JAA39704.1| zinc finger protein, X-linked [Pan troglodytes]
Length = 800
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 598
>gi|354487148|ref|XP_003505736.1| PREDICTED: zinc finger Y-chromosomal protein isoform 2 [Cricetulus
griseus]
Length = 749
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 465 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 513
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 514 HTGEKPYECQYCEYRSADSSNLKTHVKTKHSKEM 547
>gi|291407237|ref|XP_002720028.1| PREDICTED: Zinc finger X-chromosomal protein-like isoform 1
[Oryctolagus cuniculus]
Length = 798
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 514 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 562
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 563 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 596
>gi|291237262|ref|XP_002738554.1| PREDICTED: zinc finger protein 64-like, partial [Saccoglossus
kowalevskii]
Length = 845
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 51 QSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
Q C + +S V L H+ +CP F C CD I+ +++ H IH
Sbjct: 265 QICNYASRNSSQLVVHLRSHTGDCP-----------FQCQQCDAKFKINSDLKRHMRIHT 313
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G+K + C LC Y K L+ H++ H+
Sbjct: 314 GEKPYTCELCDYRCAMKGNLRAHMRINHN 342
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 91 ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
C + + ++++ H H G+K FKC +C +++KL+ H+++ K
Sbjct: 182 GCSFVSAYNKDLERHYRTHTGEKPFKCEMCHKAFNRRDKLKVHLRSHSGEK 232
>gi|260810933|ref|XP_002600177.1| hypothetical protein BRAFLDRAFT_66685 [Branchiostoma floridae]
gi|229285463|gb|EEN56189.1| hypothetical protein BRAFLDRAFT_66685 [Branchiostoma floridae]
Length = 1332
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ C C Y T + H H G+K +KC C Y +K +L+ H+ KH+
Sbjct: 947 RYSCDKCGYKTTFHSALNRHKRTHTGEKPYKCDHCDYSTERKTRLEIHMATKHT 1000
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 46 NSVIPQSCKHCKNFTSSDVNLLMEHSENCP-----CMVRPDPVKYK-FICVACDYFTIIS 99
NS+ + C N +++ +L + SE C M + P K F C CD+
Sbjct: 8 NSMGNLPVEQCGNEVTTEEKMLDQESETCSEDFTLQMDKSKPTGDKPFKCDQCDFSAKCK 67
Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H H G+K ++C C + K L H++ KH+
Sbjct: 68 SHLDEHLYTHSGEKPYQCSQCEHKTAYKSALTRHMRRKHA 107
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K F C CDY ++ +H H G+K ++C C + K L H++ KH+ K
Sbjct: 141 KRSFKCDRCDYSARCRSHLEDHLYTHSGEKPYQCSHCDHRTAYKSALARHMRRKHAGK 198
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T ++ + H H G+K FKC C Y A +K L+ H+
Sbjct: 1060 LMCERCGYRTAYNEELTVHMRTHTGEKPFKCNQCDYSAIRKSFLKRHM 1107
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 33 IGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVAC 92
GH QT + P C+ C + ++ L EH M++ K C C
Sbjct: 708 TGHAQTTERSK--GTFKPYGCEEC-GYRAATRYKLSEH------MLKHSSDKC-HKCEKC 757
Query: 93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
DY T + H H+G+K +KC C Y +K +L H+
Sbjct: 758 DYKTQYKSALNRHVKTHIGEKPYKCDQCDYSTTRKGRLDKHM 799
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
+ C CDY N++ H IH G+K++ C C Y
Sbjct: 920 YKCDQCDYSAAERSNLKQHMYIHTGEKRYSCDKCGY 955
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ C C++ T + H +H G+K +KC C Y A ++ L+ HV H
Sbjct: 836 YKCDECEFKTTDKYSFSAHMRLHTGEKPYKCHKCDYAATRRGPLRRHVIKHHG 888
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C HC T L + M + + C C Y T + H H
Sbjct: 975 PYKCDHCDYSTERKTRLEIH-------MATKHTGERTYTCDLCKYVTTQESRLSRHVKSH 1027
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K F C LC++ K+ L+ H+
Sbjct: 1028 TGEKPFICDLCNFATVTKKMLRKHM 1052
>gi|260800077|ref|XP_002594963.1| hypothetical protein BRAFLDRAFT_130495 [Branchiostoma floridae]
gi|229280201|gb|EEN50974.1| hypothetical protein BRAFLDRAFT_130495 [Branchiostoma floridae]
Length = 884
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+C C + T ++ H H G+KQ+ C C Y AYQK L H+K KH+
Sbjct: 319 VCGVCGFRTAYQAHLYKHMKTH-GNKQYSCDQCDYAAYQKAHLDRHIKAKHT 369
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ICV C Y T + H IH +K +KC C + KE L H K+KH+
Sbjct: 541 YICVECGYETASKSGLSRHKKIHSREKPYKCDQCDFRTAWKEYLSLH-KSKHT 592
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
C CDY T NM H + H G+K + C C Y + K L+ H+K +
Sbjct: 444 CELCDYRTTWKANMVTHMVKHSGEKPYMCDQCGYRSAYKSGLRSHMKTQ 492
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 77 MVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
M P + F C CD+ T +++NH H G+K+F C +C + H++
Sbjct: 377 MCGRKPREKSFKCDQCDFCTAYKHSLKNHMAQHTGEKRFMCEICGFRTADHSSFSNHMR- 435
Query: 137 KHSTKV 142
+H+ +V
Sbjct: 436 EHTGEV 441
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C CDY +I S N+ H + H G+K + C C Y + + L H+K
Sbjct: 818 CDLCDYSSIWSGNLAKHMVKHTGEKPYMCDQCGYRSAYRSGLTSHMK 864
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C++ T ++ H IH +K ++C LC Y A QK L H+
Sbjct: 653 YTCGECEFRTAYKCHLSRHKRIHTTEKPYRCNLCDYSANQKGHLDRHM 700
>gi|392933949|ref|NP_001255984.1| transcriptional repressor CTCFL isoform 13 [Homo sapiens]
gi|111550176|gb|ABH10109.1| BORIS transcription factor transcript variant B5 [Homo sapiens]
Length = 299
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 80 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 128
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 79 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 130
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KH V
Sbjct: 131 SGEKPYECHICHTRFTQSGTMKIHILQKHGENV 163
>gi|281349402|gb|EFB24986.1| hypothetical protein PANDA_017361 [Ailuropoda melanoleuca]
Length = 780
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 496 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 544
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 545 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 578
>gi|426256792|ref|XP_004022021.1| PREDICTED: zinc finger X-chromosomal protein isoform 1 [Ovis aries]
gi|115502479|sp|O62836.2|ZFX_BOVIN RecName: Full=Zinc finger X-chromosomal protein
gi|440898928|gb|ELR50324.1| Zinc finger X-chromosomal protein [Bos grunniens mutus]
Length = 800
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 598
>gi|441638119|ref|XP_004090111.1| PREDICTED: transcriptional repressor CTCFL [Nomascus leucogenys]
Length = 420
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 103 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 151
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 102 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 153
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 154 SGEKPYECHICHARFTQNGTMKTHILQKHSENV 186
>gi|202456|gb|AAA40585.1| zinc finger protein (Zfx) [Mus musculus]
Length = 839
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 555 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 603
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 604 HTGEKPYECQYCEYRSADSSNLKTHVKTKHSKEM 637
>gi|410261678|gb|JAA18805.1| zinc finger protein, Y-linked [Pan troglodytes]
Length = 801
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 599
>gi|410261672|gb|JAA18802.1| zinc finger protein, Y-linked [Pan troglodytes]
gi|410261674|gb|JAA18803.1| zinc finger protein, Y-linked [Pan troglodytes]
gi|410261680|gb|JAA18806.1| zinc finger protein, Y-linked [Pan troglodytes]
Length = 801
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 599
>gi|383421393|gb|AFH33910.1| zinc finger X-chromosomal protein isoform 1 [Macaca mulatta]
Length = 803
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 519 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 567
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 568 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 601
>gi|260826640|ref|XP_002608273.1| hypothetical protein BRAFLDRAFT_125083 [Branchiostoma floridae]
gi|229293624|gb|EEN64283.1| hypothetical protein BRAFLDRAFT_125083 [Branchiostoma floridae]
Length = 4574
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
K F C C + T + +R H IH G+K + C C Y A QK L H++
Sbjct: 2455 KRTFNCEECGFSTYRRETLRTHMRIHSGEKPYACSFCPYRARQKPNLNTHMQ 2506
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 57 KNFTSSDVNLLMEHS---ENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDK 113
KN + + EHS E P K F C C + T S +++ H IH G K
Sbjct: 2544 KNLGTPEKEDYSEHSDSPEKSPRSKVTRDRKGLFRCKHCSFHTRHSTSIQRHLKIHEGSK 2603
Query: 114 QFKCCLCSYGAYQKEKLQFHVKNKHST 140
FKC CSY A ++Q H K+ T
Sbjct: 2604 PFKCKHCSYRAITLFQIQGHEKHHDET 2630
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 77 MVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ P VK ++ C CDY + + H H G+K + C C Y E L H+K+
Sbjct: 3682 LAEPLVVKKRYECQICDYTSEDKSRLVKHQRTHTGEKPYSCRFCPYKTALNESLWKHMKH 3741
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C C Y T + + + H H G+ FKC CSY A K FHVK
Sbjct: 3612 YGCDMCPYRTPLRETLMRHKKHHTGNFAFKCSFCSYSA----KRDFHVKE 3657
>gi|403294886|ref|XP_003938391.1| PREDICTED: zinc finger protein 281 [Saimiri boliviensis
boliviensis]
Length = 1183
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 546 PSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 599
>gi|219841784|gb|AAI44980.1| Zfx protein [Mus musculus]
Length = 749
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 465 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 513
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 514 HTGEKPYECQYCEYRSADSSNLKTHVKTKHSKEM 547
>gi|260809003|ref|XP_002599296.1| hypothetical protein BRAFLDRAFT_64347 [Branchiostoma floridae]
gi|229284573|gb|EEN55308.1| hypothetical protein BRAFLDRAFT_64347 [Branchiostoma floridae]
Length = 394
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C S L L+ H+ P +C C Y
Sbjct: 142 HMRTHTGETPYKCDQCDYAASRKSTLDIHLLTHTGEKP-----------HVCSVCGYRAY 190
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
N+ H IH G+K +KC C Y A +K +L++H+ KHS
Sbjct: 191 QRSNLSIHMRIHTGEKPYKCNQCDYSAARKNELKYHLA-KHS 231
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLL----MEHSENCPCMVRPDPVKYKFICVACDYFT 96
+M P C C +++++ N L +HS+ P F+C C Y T
Sbjct: 198 HMRIHTGEKPYKCNQC-DYSAARKNELKYHLAKHSDQKP-----------FVCKECGYKT 245
Query: 97 IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ NH H G+K++KC C Y A K L H+
Sbjct: 246 HKKYNLTNHMRYHTGEKRYKCDQCDYCAAHKHTLDEHM 283
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y + + +R H H G+K +KC C Y A +K L H+
Sbjct: 68 YACGECGYRSRHRKALRQHQRTHTGEKPYKCDQCDYSAARKSTLDHHL 115
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y S + H H G+ +KC C Y A +K L H+
Sbjct: 124 YICRECGYAANQSGALTRHMRTHTGETPYKCDQCDYAASRKSTLDIHL 171
>gi|260781005|ref|XP_002585619.1| hypothetical protein BRAFLDRAFT_111659 [Branchiostoma floridae]
gi|229270637|gb|EEN41630.1| hypothetical protein BRAFLDRAFT_111659 [Branchiostoma floridae]
Length = 382
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
D + +IC C Y + ++ H H G+K FKC C Y A QK L HV+
Sbjct: 116 DTGEKPYICGECGYRAGLKSSLLKHMKTHSGEKPFKCDQCDYSALQKSSLSDHVR 170
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C HC + +L L +H+ P ++C C Y + + H
Sbjct: 37 PYKCNHCDYSAARKSSLDLHLTKHTGEKP-----------YMCGECGYRAGLKSCLTKHM 85
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
IH G+K +KC C Y A QK L FH+
Sbjct: 86 KIHSGEKPYKCDQCDYSAVQKTSLDFHL 113
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+R + + C CDY ++ H IH G+K +KC C Y A +K L H+
Sbjct: 1 MRTHTAEKPYKCGQCDYAAKWKSDLSIHLRIHTGEKPYKCNHCDYSAARKSSLDLHL 57
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CDY + ++ +H H G+K +KC C Y K L H+
Sbjct: 150 FKCDQCDYSALQKSSLSDHVRTHTGEKPYKCDQCDYSVAHKSNLAQHL 197
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++++++ L+EH +R + ++C C Y T
Sbjct: 280 HMRTHTGEKPYKCDQC-DYSAAEKYNLVEH-------LRKHTGEKPYMCGECGYRTAHKS 331
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G+K KC C Y K L H+
Sbjct: 332 NLSAHMRTHTGEKPNKCDKCDYSTIPKSHLDQHM 365
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 29/79 (36%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K + + H N +R + + C CDY N+ H H G+K +
Sbjct: 260 KPYMCGECGFRAAHKSNSIAHMRTHTGEKPYKCDQCDYSAAEKYNLVEHLRKHTGEKPYM 319
Query: 117 CCLCSYGAYQKEKLQFHVK 135
C C Y K L H++
Sbjct: 320 CGECGYRTAHKSNLSAHMR 338
>gi|113205061|ref|NP_035898.2| zinc finger X-chromosomal protein [Mus musculus]
gi|113205067|ref|NP_001037851.1| zinc finger X-chromosomal protein [Mus musculus]
gi|110825753|sp|P17012.2|ZFX_MOUSE RecName: Full=Zinc finger X-chromosomal protein
gi|202454|gb|AAA40584.1| zinc finger protein [Mus musculus]
gi|187957560|gb|AAI37860.1| Zinc finger protein X-linked [Mus musculus]
Length = 799
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 515 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 563
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 564 HTGEKPYECQYCEYRSADSSNLKTHVKTKHSKEM 597
>gi|311276054|ref|XP_003135029.1| PREDICTED: zinc finger X-chromosomal protein isoform 1 [Sus scrofa]
Length = 800
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 598
>gi|260808995|ref|XP_002599292.1| hypothetical protein BRAFLDRAFT_199914 [Branchiostoma floridae]
gi|229284569|gb|EEN55304.1| hypothetical protein BRAFLDRAFT_199914 [Branchiostoma floridae]
Length = 516
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C C Y T + N+ H IH G+K FKC C Y A +K L H+
Sbjct: 236 FSCGDCGYRTALKSNLSQHLHIHTGEKPFKCDQCDYLAARKAHLDSHL 283
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F+C C Y T + N+ H +H G+K +C C Y A +K L H++
Sbjct: 348 FVCGECGYSTAVKSNLFQHLKMHTGEKPHQCDHCDYSATRKSHLNRHLR 396
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
NF+++ L +H VR + +IC C Y T + H H G+K +KC
Sbjct: 104 NFSTATEITLNKH-------VRQHSGEKAYICRECGYSTSRRYMLSRHKRTHTGEKPYKC 156
Query: 118 CLCSYGAYQKEKLQFHV 134
C Y A +K L H+
Sbjct: 157 DQCDYSAARKHHLDIHL 173
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY ++ NH H GDK FKC C Y A +K L H+
Sbjct: 14 YKCHLCDYSAAHKLSLDNHVAKHTGDKPFKCDHCDYSAVRKAHLNDHM 61
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY + ++ +H H G+K F C C Y K L H+K
Sbjct: 42 FKCDHCDYSAVRKAHLNDHMTTHTGEKPFACGQCGYRLATKSSLSQHLK 90
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ NH H G+K F C C Y A +K L H+K
Sbjct: 182 YTCDQCDYSAAHKLSLDNHLAKHTGEKPFACDQCDYTAVRKSHLNDHMK 230
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLG-DKQFKCCLCSYGAYQKEKLQFHV 134
+++C C Y T+ S ++ H H +K +KC C Y A QK L H+
Sbjct: 459 RYVCGECGYRTVESSSLSKHQRTHTDREKPYKCDQCDYSAMQKASLDTHL 508
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CDY ++ +H + H G+K + C C Y A K L H+
Sbjct: 264 FKCDQCDYLAARKAHLDSHLITHTGEKPYTCDQCDYSAAHKLSLDNHL 311
>gi|260832101|ref|XP_002610996.1| hypothetical protein BRAFLDRAFT_61067 [Branchiostoma floridae]
gi|229296366|gb|EEN67006.1| hypothetical protein BRAFLDRAFT_61067 [Branchiostoma floridae]
Length = 776
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + +L L +H+ + PCM C C Y T
Sbjct: 425 HMRTHTGEKPYKCDQCDYSAARKSSLDRHLAKHTGDKPCM-----------CGECGYRTA 473
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H H GDK +KC C + A QK L H+
Sbjct: 474 QKSDLSKHMRTHTGDKPYKCDQCDFSAAQKSNLDRHL 510
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T ++ H H G+K +KC C Y A +K L H+
Sbjct: 407 FMCGECGYRTAQKSDLSRHMRTHTGEKPYKCDQCDYSAARKSSLDRHL 454
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 40/120 (33%), Gaps = 21/120 (17%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENC 74
C C P D+ +M P C C + NL L +H
Sbjct: 2 CGECGYRAPQKSDLS-------KHMRTHTGEKPYKCDKCDYSAAQKSNLDIHLAKHKGGK 54
Query: 75 PCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
P F+C C Y T + H H G++ +KC C Y A QK L H+
Sbjct: 55 P-----------FMCGECGYGTTTKAGLAKHMRTHTGERPYKCDQCDYSAAQKYTLNRHL 103
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + Q + H H GDK F C C Y QK L H++
Sbjct: 601 YKCDQCDYSAGLKQLLDRHLAKHTGDKPFMCGECGYRTTQKSALSIHMR 649
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + N+ H IH G+K +KC C Y A K+ L H+
Sbjct: 573 YMCGECGYRTAVRCNLYRHMKIHTGEKPYKCDQCDYSAGLKQLLDRHL 620
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M + P C C + +L + +HS + P F+C C + T
Sbjct: 647 HMRAHTGIKPYKCDQCDYSAARKSHLDIHIAKHSNDKP-----------FMCGECGFRTN 695
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ H IH +K FKC C Y A +K L H+
Sbjct: 696 DRSSLSRHMKIHTSEKTFKCDQCDYSAARKHHLDRHL 732
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ C Y T + + H IH G+K +KC C Y A +K+ L H+
Sbjct: 180 YMWGECGYSTTARRYLTRHMKIHAGEKPYKCDQCDYSAARKQHLDIHL 227
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 25/59 (42%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+R + + C CDY ++ H H GDK F C C Y QK L H++
Sbjct: 370 MRTHTGRKPYKCDQCDYSAAHKLSLDQHLARHTGDKPFMCGECGYRTAQKSDLSRHMRT 428
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y T + H H G K +KC C Y A +K L H+ KHS
Sbjct: 629 FMCGECGYRTTQKSALSIHMRAHTGIKPYKCDQCDYSAARKSHLDIHIA-KHS 680
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + + H H GDK + C C Y A K L H++
Sbjct: 323 YNCDQCDYSAAVKSTLDRHLAKHTGDKPYMCGECGYRAALKSHLSVHMRT 372
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y ++ H H G+K +KC C Y A QK L H+
Sbjct: 1 MCGECGYRAPQKSDLSKHMRTHTGEKPYKCDKCDYSAAQKSNLDIHL 47
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
Query: 49 IPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTI----ISQNMRN 104
Q C CK+ S + +H+ P ++C AC+Y T ++++MR
Sbjct: 121 TAQKCDLCKHMRSHTEIHIAKHTGEKP-----------YMCGACEYRTADRRHLNRHMRT 169
Query: 105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
HT H G+K + C Y + L H+K
Sbjct: 170 HTAKHSGEKPYMWGECGYSTTARRYLTRHMK 200
>gi|410261682|gb|JAA18807.1| zinc finger protein, Y-linked [Pan troglodytes]
Length = 801
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 599
>gi|383421401|gb|AFH33914.1| zinc finger X-chromosomal protein isoform 1 [Macaca mulatta]
Length = 802
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 518 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 566
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 567 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 600
>gi|348532351|ref|XP_003453670.1| PREDICTED: fez family zinc finger protein 1-like [Oreochromis
niloticus]
Length = 438
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C N +NH L H G+KQFKC +CS +Q L FH+
Sbjct: 348 FVCEFCGKGFHQKGNYKNHKLTHSGEKQFKCSICSKAFHQVYNLTFHM 395
>gi|260823042|ref|XP_002603992.1| hypothetical protein BRAFLDRAFT_119787 [Branchiostoma floridae]
gi|229289317|gb|EEN60003.1| hypothetical protein BRAFLDRAFT_119787 [Branchiostoma floridae]
Length = 588
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C+Y T ++ H +H G++ +KC LC Y A QK L H+
Sbjct: 387 YMCRECEYRTAHQSHLSRHMRVHTGERPYKCDLCDYSAAQKGHLVQHL 434
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G+K +KC C Y A QK +L H+
Sbjct: 180 YMCGECGYRTTYRSHLSQHMRTHTGEKPYKCDKCDYSAAQKGELNKHI 227
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C+ C +F++ D + L +H + Y ++C C Y T S
Sbjct: 461 HMRTHTGEKPYKCEQC-DFSAIDKSKLKQHQ-----VKHTGEKPYIYMCGECGYKTAYSS 514
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+ H H G+K +KC C Y A +K L H + +HS
Sbjct: 515 LLSRHMRTHTGEKPYKCDQCDYSAAEKHHLIDH-QTRHS 552
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ +H H G+K +KC C Y A Q+ L H+K
Sbjct: 529 YKCDQCDYSAAEKHHLIDHQTRHSGEKPYKCGECGYRAAQRSTLSRHMK 577
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 16/103 (15%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNL----LMEHSENCPCMVRPDPVKYKFICVA 91
C+ +M P C C ++++++ + LM+HS P F+C
Sbjct: 288 CKLSRHMRIHTGEKPYKCDQC-DYSAAEKSTFDKHLMKHSGEKP-----------FMCGE 335
Query: 92 CDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C Y T ++ H H G+K +KC C Y A + L H+
Sbjct: 336 CWYRTTQKSHLSRHMKTHTGEKPYKCDQCDYSAAVQSTLDKHL 378
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C + T ++ H H G+K +KC C + A K KL+ H
Sbjct: 443 YMCGECGHRTAQMSDLSKHMRTHTGEKPYKCEQCDFSAIDKSKLKQH 489
>gi|432962520|ref|XP_004086710.1| PREDICTED: zinc finger protein 407-like [Oryzias latipes]
Length = 1971
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C++ T + RNH HLG +++KC +C + K+ L H+ KH
Sbjct: 916 FMCKICNFATAQLGDARNHVKRHLGMREYKCHICGWAFVMKKHLSTHLLGKHG 968
>gi|296205592|ref|XP_002806980.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 142 [Callithrix
jacchus]
Length = 1551
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 452 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 503
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 504 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 534
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1350 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1398
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 211 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 266
>gi|260806396|ref|XP_002598070.1| hypothetical protein BRAFLDRAFT_85714 [Branchiostoma floridae]
gi|229283341|gb|EEN54082.1| hypothetical protein BRAFLDRAFT_85714 [Branchiostoma floridae]
Length = 139
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 11/78 (14%)
Query: 61 SSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC 120
S D ++ +HS+ P +ICV C Y + H H G+K +KC C
Sbjct: 42 SVDNHIAAKHSDMKP-----------YICVECGYRAFQKATLTRHMRTHTGEKPYKCDQC 90
Query: 121 SYGAYQKEKLQFHVKNKH 138
Y QK L H+ KH
Sbjct: 91 DYSVAQKVTLAIHMAAKH 108
>gi|29135277|ref|NP_803457.1| zinc finger Y-chromosomal protein [Bos taurus]
gi|75073824|sp|Q95LI3.1|ZFY_BOVIN RecName: Full=Zinc finger Y-chromosomal protein
gi|16416473|gb|AAL18261.1|AF032867_1 Y-linked zinc finger protein [Bos taurus]
Length = 801
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 599
>gi|395838103|ref|XP_003791964.1| PREDICTED: zinc finger X-chromosomal protein [Otolemur garnettii]
Length = 800
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 598
>gi|297490806|ref|XP_002698453.1| PREDICTED: zinc finger protein 518A [Bos taurus]
gi|296472750|tpg|DAA14865.1| TPA: KIAA0335-like [Bos taurus]
Length = 1482
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+ C+ F++ DV ++H + R + + YK C C Y + ++ H IH G
Sbjct: 220 CEKCE-FSTQDVGTFVQH------IHRHNEILYK--CGKCHYICLTKGELQKHLYIHSGT 270
Query: 113 KQFKCCLCSYGAYQKEKLQFHV 134
F C CSYGA ++E L HV
Sbjct: 271 FPFTCQYCSYGATRREHLVRHV 292
>gi|260810837|ref|XP_002600129.1| hypothetical protein BRAFLDRAFT_276371 [Branchiostoma floridae]
gi|229285415|gb|EEN56141.1| hypothetical protein BRAFLDRAFT_276371 [Branchiostoma floridae]
Length = 214
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CD+ T + +++ NH IH G+K KC LC Y A +K L+ H+
Sbjct: 112 YECEECDFTTHVKKSLINHVKIHTGEKPHKCDLCDYSALRKSCLEAHM 159
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H G+ +KC LC Y A QK L H+
Sbjct: 56 YLCEKCGYRTAYPANLNVHMRQHTGEMPYKCSLCDYAAAQKGHLDQHL 103
>gi|260815781|ref|XP_002602651.1| hypothetical protein BRAFLDRAFT_81931 [Branchiostoma floridae]
gi|229287962|gb|EEN58663.1| hypothetical protein BRAFLDRAFT_81931 [Branchiostoma floridae]
Length = 324
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C HC N++++ + L +H ++ + ++C C Y T +
Sbjct: 235 HMRTHTGGKPYKCGHC-NYSAALKSTLAKH-------IKQHTGEKPYMCGECGYRTAKKR 286
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+ H H G+K F C C Y A K L H K
Sbjct: 287 NLSQHMRTHTGEKPFLCDQCGYSAALKSTLSNHCK 321
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
N L +H+ P M +IC C Y T ++ H H G K +KC C+Y A
Sbjct: 195 NHLAKHAGAKPYMCEQCGGDKLYICDQCGYRTAQMSHLSEHMRTHTGGKPYKCGHCNYSA 254
Query: 125 YQKEKLQFHVKN 136
K L H+K
Sbjct: 255 ALKSTLAKHIKQ 266
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y T+ + H H G+K +KC C+Y A +K L H+
Sbjct: 150 YICGECGYRTVRKFYLSTHMRTHTGEKPYKCGQCNYSARRKSHLDNHL 197
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
+IC C Y T+ ++ H H G+K +KC C Y A K L
Sbjct: 94 YICGECGYKTVRKSHLSQHMRTHTGEKPYKCNQCDYSAALKSSL 137
>gi|391340301|ref|XP_003744481.1| PREDICTED: uncharacterized protein LOC100908370 [Metaseiulus
occidentalis]
Length = 354
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
C+ C + NM+ H + HLG K FKC C + + + L H+K +H
Sbjct: 293 CMLCPHTATFPSNMKRHIMAHLGIKPFKCAYCDFQSTLRGDLTVHLKKRH 342
>gi|383421403|gb|AFH33915.1| zinc finger X-chromosomal protein isoform 1 [Macaca mulatta]
Length = 799
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 515 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 563
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 564 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 597
>gi|332249021|ref|XP_003273661.1| PREDICTED: zinc finger protein PLAGL2, partial [Nomascus
leucogenys]
Length = 469
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 52 SCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
SCK C + F S+ L+EH + V + K C CD +++R H ++H
Sbjct: 287 SCKVCLQTFESTQA--LLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHT 344
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G K F C C+ +K+ L HVK HS ++
Sbjct: 345 GRKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 376
>gi|260823108|ref|XP_002604025.1| hypothetical protein BRAFLDRAFT_71686 [Branchiostoma floridae]
gi|229289350|gb|EEN60036.1| hypothetical protein BRAFLDRAFT_71686 [Branchiostoma floridae]
Length = 682
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQN 101
M P C C +++++ + L+ H ++ + FIC AC Y T +
Sbjct: 309 MRIHTGEKPYRCDQC-GYSAAEKSNLVTH-------IKKHTGEKPFICGACGYRTAHKSD 360
Query: 102 MRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ H H G+K + C C Y A +K L H++ KH+ +
Sbjct: 361 LSRHMRTHSGEKPYMCDQCDYSATEKSHLDRHLR-KHTGE 399
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T ++ H H GDK +KC C Y A K L H+ +KHS +
Sbjct: 402 YMCGECGYRTTQRGHLSRHMRTHTGDKPYKCDQCDYSAAHKSDLDQHL-SKHSGE 455
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 22/52 (42%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
++C C Y T H IH G+K F C C Y K L H+ KH
Sbjct: 233 YMCGECGYRTATKSRFSRHMKIHTGEKAFTCDQCDYSTSLKSNLNRHIGEKH 284
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++CV C Y + H H G+K +KC C Y A QK L H+
Sbjct: 182 YMCVECGYRAAYKSQISQHMRTHTGEKPYKCDQCDYSAAQKGGLNKHL 229
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C + T ++ H IH G+K ++C C Y A +K L H+K KH+ +
Sbjct: 290 YMCGECGHRTAQKSSLSKHMRIHTGEKPYRCDQCGYSAAEKSNLVTHIK-KHTGE 343
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 87 FICVACDYFTIISQNMRNH-TLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CDY T + N+ H H+G+K + C C + QK L H++
Sbjct: 261 FTCDQCDYSTSLKSNLNRHIGEKHIGEKPYMCGECGHRTAQKSSLSKHMR 310
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y Q++ H H G+K +KC C Y QK L H+
Sbjct: 458 YMCGECGYRAARKQHLSLHMRTHTGEKPYKCDQCDYSTAQKGMLDQHL 505
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H H G+K + C C Y A +K+ L H++
Sbjct: 430 YKCDQCDYSAAHKSDLDQHLSKHSGEKPYMCGECGYRAARKQHLSLHMR 478
>gi|301754355|ref|XP_002913041.1| PREDICTED: zinc finger protein 64 homolog, isoforms 3 and 4-like
[Ailuropoda melanoleuca]
Length = 792
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
+ C CDY S ++ H IH ++ +KC LC Y + +L H+++ +++++D
Sbjct: 350 YKCKTCDYAAADSSSLNKHLRIHSDERPYKCQLCPYASRNSSQLTVHLRSHTASELED 407
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C S NL M C V+P C CDY + S +++ H IH
Sbjct: 476 PHKCEFCDKCFSRKDNLTMHM--RCHTSVKP------HKCHLCDYAAVDSSSLKKHLRIH 527
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ +KC LC Y + +L H+++
Sbjct: 528 SDERPYKCQLCPYASRNSSQLTVHLRS 554
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C IS +++ H ++H G+K FKC C+ K L+ H++ KH+ K
Sbjct: 561 FQCWLCSAKFKISSDLKRHMIVHSGEKPFKCEFCNVRCTMKGNLKSHIRIKHTFK 615
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C HC +F D L+EHS R + C C Y + +R H+ +H D
Sbjct: 616 CLHC-SFQGRDRADLLEHS-------RLHQADHPEKCPECSYSCSSAAALRVHSRVHCKD 667
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+ FKC CS+ + L H+ H + K
Sbjct: 668 RPFKCDFCSFDTKRPSSLAKHIDKVHRDETK 698
>gi|296470524|tpg|DAA12639.1| TPA: zinc finger Y-chromosomal protein [Bos taurus]
Length = 800
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 599
>gi|260794242|ref|XP_002592118.1| hypothetical protein BRAFLDRAFT_114861 [Branchiostoma floridae]
gi|229277333|gb|EEN48129.1| hypothetical protein BRAFLDRAFT_114861 [Branchiostoma floridae]
Length = 392
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M +S P C+ C +++++ + L +H + + + C CDY ++
Sbjct: 195 HMVVHSSEKPYKCELC-DYSAARIQHLKQH-------IARHAGEKNYKCELCDYSGLMLV 246
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+++ H ++H D+ +KC LC Y +K ++ H+K
Sbjct: 247 DLKQHMVVHSTDRPYKCELCDYSGARKSDVKIHMKT 282
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C CDY + + H IH G+K KC C Y +K L+ H++ KH+
Sbjct: 291 CPFCDYAAAHASQLTQHVRIHKGEKPHKCDFCDYRTLRKTHLRRHIQAKHT 341
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 42 MSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQN 101
MS P +C C F + ++ L H + + + C CDY +
Sbjct: 140 MSIHTGEKPYNCDTC-GFATGRLSNLKRH-------IATHTSERPYKCTVCDYAASWPDD 191
Query: 102 MRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H ++H +K +KC LC Y A + + L+ H+
Sbjct: 192 LNRHMVVHSSEKPYKCELCDYSAARIQHLKQHI 224
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 50 PQSCKHCKNFTSSDVNL----LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
P C C TS NL + +HS+ RP + + C C Y Q++ H
Sbjct: 28 PFQCDRCDYSTSEKANLKTHIMGKHSD-----YRPYTCEKPYKCELCAYSAYQRQHLVRH 82
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
H G+K KC +C Y Q L+ H+ K
Sbjct: 83 MAKHTGEKPHKCEICGYSTSQASYLKTHMARHRGEK 118
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 88 ICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+C CDY T ++ H + H G++ F+C C Y +K L+ H+ KHS
Sbjct: 1 MCDQCDYSTGNKYALKKHVKVTHRGERPFQCDRCDYSTSEKANLKTHIMGKHS 53
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
C C Y T + ++ H H G+K +KC LC Y A K L H+ + H+
Sbjct: 94 CEICGYSTSQASYLKTHMARHRGEKPYKCKLCDYAATLKSGLTRHMMSIHT 144
>gi|410987789|ref|XP_004000177.1| PREDICTED: zinc finger protein ZFAT isoform 1 [Felis catus]
Length = 1247
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 89 CVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 886 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 938
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 48 VIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL 107
V P C C+ T S NL + + + +C C +++H L
Sbjct: 910 VKPFKCSLCEYATRSKSNLKAHMNRH--------STEKTHLCDMCGKKFKSKGTLKSHKL 961
Query: 108 IHLGD-KQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+H D KQFKC +C Y A QK +L H++ S K
Sbjct: 962 LHTADGKQFKCTVCDYTAAQKPQLLRHMEQHASFK 996
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 79 RPDPVKYK-FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
R P + K F C C+ +++ H IH +K +KC CSY + K L H++ K
Sbjct: 263 RLGPTQLKIFTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLR-K 321
Query: 138 HS 139
H+
Sbjct: 322 HT 323
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K FT N + + + +R + + C C Y + I N+ H H G+K F
Sbjct: 270 KIFTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEK-FA 328
Query: 117 CCLCSYGAYQKEKLQFHVKNKHSTKVK 143
C C++ K L+ HV+ H KVK
Sbjct: 329 CDYCAFTCLSKGHLKVHVERVHK-KVK 354
>gi|383421395|gb|AFH33911.1| zinc finger X-chromosomal protein isoform 1 [Macaca mulatta]
Length = 802
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 518 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 566
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 567 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 600
>gi|326680516|ref|XP_001919345.2| PREDICTED: zinc finger protein 568-like [Danio rerio]
Length = 375
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%)
Query: 72 ENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQ 131
+N +R + FIC C QN+ H IH G+K F C LC G QK+ LQ
Sbjct: 252 QNLEVHMRTHTGEKPFICHKCGKGFKQIQNLEAHMTIHTGEKPFVCYLCGKGFTQKQNLQ 311
Query: 132 FHV 134
H+
Sbjct: 312 VHM 314
>gi|291407241|ref|XP_002720030.1| PREDICTED: Zinc finger X-chromosomal protein-like isoform 3
[Oryctolagus cuniculus]
Length = 747
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 463 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 511
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 512 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 545
>gi|195376191|ref|XP_002046880.1| GJ12245 [Drosophila virilis]
gi|194154038|gb|EDW69222.1| GJ12245 [Drosophila virilis]
Length = 806
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 14 TKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSEN 73
T+ L +K + S +D + C CP + + H N +SD L+ +
Sbjct: 430 TQSNSLKAHKLIHSVVDKPVFQCTLCPTTCGRKADLRT---HMANMHTSDKPLICKR--- 483
Query: 74 CPCMVRPDPVKYK-----------FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
C + PD +YK + C C Y ++ +++ +H LIH K FKC LCS
Sbjct: 484 CGQEL-PDRYQYKLHIKSHEGEKCYRCSLCSYASVSQRHLDSHMLIHTDTKPFKCDLCSQ 542
Query: 123 GAYQKEKLQFHVKNKHSTKVK 143
Q++ L+ HV H+ K
Sbjct: 543 AFRQRQLLRRHVNLMHNEDYK 563
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 21 CNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQ--SCKHCKNFTSSDVNLLMEHSENCPCMV 78
N SD+D + Q + NS Q +C HC ++T++ L+ H V
Sbjct: 247 ANMSARSDVDFVLSSNQYKLKPAASNSAGSQKYACSHC-SYTTNKKFLISRH-------V 298
Query: 79 RPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
R + F C C+ + + NH H+G+K KC LC +L H + KH
Sbjct: 299 RSHDSELSFKCSICERGFKSNMGLVNHLNTHMGNKPHKCKLCESAFTTSGELIRHTRYKH 358
Query: 139 S 139
+
Sbjct: 359 T 359
>gi|119917516|ref|XP_603021.3| PREDICTED: zinc finger protein 518A [Bos taurus]
Length = 1482
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+ C+ F++ DV ++H + R + + YK C C Y + ++ H IH G
Sbjct: 220 CEKCE-FSTQDVGTFVQH------IHRHNEILYK--CGKCHYICLTKGELQKHLYIHSGT 270
Query: 113 KQFKCCLCSYGAYQKEKLQFHV 134
F C CSYGA ++E L HV
Sbjct: 271 FPFTCQYCSYGATRREHLVRHV 292
>gi|410907666|ref|XP_003967312.1| PREDICTED: fez family zinc finger protein 1-like [Takifugu
rubripes]
Length = 394
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C N +NH L H G+KQFKC +CS +Q L FH+
Sbjct: 302 FVCEFCGKGFHQKGNYKNHKLTHSGEKQFKCSICSKAFHQVYNLTFHM 349
>gi|383421391|gb|AFH33909.1| zinc finger X-chromosomal protein isoform 1 [Macaca mulatta]
gi|383421405|gb|AFH33916.1| zinc finger X-chromosomal protein isoform 1 [Macaca mulatta]
Length = 802
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 518 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 566
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 567 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 600
>gi|355711922|gb|AES04173.1| pleiomorphic adenoma protein-like 2 [Mustela putorius furo]
Length = 394
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 52 SCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
SCK C + F S+ L+EH + V + K C CD +++R H ++H
Sbjct: 166 SCKVCLQTFESTQA--LLEHLKAHSRRVAGGAKEKKHPCDHCDRRVYTRKDVRRHLVVHT 223
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G K F C C+ +K+ L HVK HS ++
Sbjct: 224 GRKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 255
>gi|354478557|ref|XP_003501481.1| PREDICTED: transcriptional repressor CTCFL [Cricetulus griseus]
gi|344254906|gb|EGW11010.1| Transcriptional repressor CTCFL [Cricetulus griseus]
Length = 665
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+CC C+Y + KL+ H++ K
Sbjct: 353 FKCSICKYASVEASKLKRHIRSHTGERPFQCCQCTYASKDTYKLKRHMRTHSGEK 407
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
KF C CDY + ++ H H G+K F C CS QK+ L H++ H
Sbjct: 496 KFKCKQCDYACKQERCLKAHVRTHTGEKPFSCLDCSKHFRQKQLLTVHLRKYH 548
>gi|210137245|gb|ACJ09044.1| Y-linked zinc finger protein, partial [Capra hircus]
Length = 175
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C +R H I
Sbjct: 54 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELRKHMRI 102
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 103 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 136
>gi|260823120|ref|XP_002604031.1| hypothetical protein BRAFLDRAFT_71679 [Branchiostoma floridae]
gi|229289356|gb|EEN60042.1| hypothetical protein BRAFLDRAFT_71679 [Branchiostoma floridae]
Length = 699
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C HC +F+++ + L +H + + ++C C Y T
Sbjct: 382 HMRTHTGERPFKCDHC-DFSAAQKSTLDDH-------LTKHTGEKPYMCGECGYRTAQRS 433
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
N+ H H G+K +KC C Y K L +H+ KH+
Sbjct: 434 NLSRHMRTHTGEKPYKCNQCDYSYADKSALNYHL-GKHA 471
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
++C C Y ++ H IH G+K +KC C Y A +K L+ HV +T K
Sbjct: 170 YMCGECGYRAAKKSHLSQHMTIHTGEKPYKCDQCDYSAARKSHLERHVAKHTATGDK 226
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 14/98 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C + +NL + +H+ P + C CDY+ +
Sbjct: 494 HMRTHTGEKPYKCDQCDYSAARKINLVQHMTKHTGEKP-----------YRCDQCDYYAV 542
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ +H H G+K F C C Y A QK H++
Sbjct: 543 QKYRLVDHLRTHTGEKPFMCGKCGYRASQKSHSSKHMR 580
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY + + ++ +H H G+K + C C Y A Q+ L H+K
Sbjct: 644 YKCDQCDYSSALKHHLIDHQTRHTGEKPYMCGECGYRAAQRATLSRHMK 692
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H G++ FKC C + A QK L H+
Sbjct: 364 YMCWDCGYRTDRKYHLSRHMRTHTGERPFKCDHCDFSAAQKSTLDDHL 411
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC C Y ++ H H G+K +KC C Y A +K L H+
Sbjct: 476 YICGECGYRATRKNDLSRHMRTHTGEKPYKCDQCDYSAARKINLVQHM 523
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y ++ H H G+K +KC C+Y A K HV+
Sbjct: 228 YMCGECGYRATQMSDLSKHMRTHTGEKPYKCDQCNYSAASKFSFNRHVR 276
>gi|440903525|gb|ELR54171.1| Zinc finger protein 518A [Bos grunniens mutus]
Length = 1482
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+ C+ F++ DV ++H + R + + YK C C Y + ++ H IH G
Sbjct: 220 CEKCE-FSTQDVGTFVQH------IHRHNEILYK--CGKCHYICLTKGELQKHLYIHSGT 270
Query: 113 KQFKCCLCSYGAYQKEKLQFHV 134
F C CSYGA ++E L HV
Sbjct: 271 FPFTCQYCSYGATRREHLVRHV 292
>gi|260818162|ref|XP_002603953.1| hypothetical protein BRAFLDRAFT_208166 [Branchiostoma floridae]
gi|229289278|gb|EEN59964.1| hypothetical protein BRAFLDRAFT_208166 [Branchiostoma floridae]
Length = 297
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C N++++ L +H +P ++C C Y T
Sbjct: 109 HMKIHTGEKPYKCDQC-NYSTARKGTL-DHHRTRHAGEKP------YMCGECGYRTTQKS 160
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H H G K +KC C Y A QK L H+ N
Sbjct: 161 HLSQHMRTHTGQKPYKCDQCDYSAAQKSSLNKHIAN 196
>gi|432964916|ref|XP_004087032.1| PREDICTED: fez family zinc finger protein 1-like [Oryzias latipes]
Length = 423
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C N +NH L H G+KQFKC +CS +Q L FH+
Sbjct: 333 FVCEFCGKGFHQKGNYKNHKLTHSGEKQFKCSICSKAFHQVYNLTFHM 380
>gi|426252855|ref|XP_004020118.1| PREDICTED: zinc finger protein 518A [Ovis aries]
Length = 1480
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C+ C+ F++ DV ++H + R + + YK C C Y + ++ H IH G
Sbjct: 220 CEKCE-FSTQDVGTFVQH------IHRHNEILYK--CGKCHYICLTKGELQKHLYIHSGT 270
Query: 113 KQFKCCLCSYGAYQKEKLQFHV 134
F C CSYGA ++E L HV
Sbjct: 271 FPFTCQYCSYGATRREHLVRHV 292
>gi|301607198|ref|XP_002933198.1| PREDICTED: zinc finger protein 64 homolog, isoforms 1 and 2
[Xenopus (Silurana) tropicalis]
Length = 677
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F C+ C+ I+ +++ H +H G+K F+C C++ K L+ H++ KH+T+
Sbjct: 271 FQCILCNAKFKINSDLKRHMRVHTGEKPFRCDFCNFVCAMKGNLKSHIRMKHNTET 326
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY S ++ H IH ++ FKC +C Y + +L H+++
Sbjct: 215 FKCKECDYRAADSSSLCKHQRIHTNERPFKCQICPYASRNSSQLTVHLRS 264
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 76 CMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C + PVK C C Y ++ H IH D+ FKC C + Q+ L H+K
Sbjct: 349 CHLPEQPVK----CADCSYSCSSKAALKVHERIHSKDRPFKCNFCQFDTKQRSNLTTHIK 404
Query: 136 NKHSTKVK 143
H +VK
Sbjct: 405 KCHGDQVK 412
>gi|260806155|ref|XP_002597950.1| hypothetical protein BRAFLDRAFT_221309 [Branchiostoma floridae]
gi|229283220|gb|EEN53962.1| hypothetical protein BRAFLDRAFT_221309 [Branchiostoma floridae]
Length = 356
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F C CD+ T +Q+++ H H GDK KC LC Y + L+ H+
Sbjct: 189 FYCELCDFSTARNQDLKRHVARHTGDKPHKCELCDYSTANRSHLKRHM 236
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
+++ +HS N P C CD+ ++ + ++ H H G+K + C LCSY +
Sbjct: 66 HVMAKHSNNRP-----------HKCTLCDFSSVSKKGLKLHMTTHTGEKPYSCELCSYAS 114
Query: 125 YQKEKLQFHV 134
QK +L+ H+
Sbjct: 115 RQKGQLKVHM 124
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
C CDY T +++ H H GDK +KC +C Y A Q L+ H+
Sbjct: 219 CELCDYSTANRSHLKRHMSTHTGDKPYKCEVCGYAAAQMYSLREHM 264
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+MS P C+ C + ++ + L EH M + K + C C YFT
Sbjct: 235 HMSTHTGDKPYKCEVC-GYAAAQMYSLREH------MTKHTGEK-PYQCEECGYFTTNKG 286
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G+K + C +C + A +K L+ H+
Sbjct: 287 NLAQHMTKHTGEKPYMCEVCGFKAARKGTLRQHI 320
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY ++ ++ H H K +KC +C Y +L+ H+ N
Sbjct: 133 FKCEVCDYSSVSKSKLKTHMFTHTNKKPYKCEICDYSTIGMSRLKLHMAN 182
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY TI ++ H H G+K F C LC + + + L+ HV
Sbjct: 161 YKCEICDYSTIGMSRLKLHMANHTGEKPFYCELCDFSTARNQDLKRHV 208
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C C Y + ++ H H G+K FKC +C Y + K KL+ H+
Sbjct: 105 YSCELCSYASRQKGQLKVHMAKHAGEKPFKCEVCDYSSVSKSKLKTHM 152
>gi|403298978|ref|XP_003940271.1| PREDICTED: fez family zinc finger protein 2 [Saimiri boliviensis
boliviensis]
Length = 475
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F+C C N +NH L H G+KQ+KC +C+ +Q L FH+ + K
Sbjct: 377 FVCEFCGKGFHQKGNYKNHKLTHSGEKQYKCTICNKAFHQVYNLTFHMHTHNDKK 431
>gi|383421399|gb|AFH33913.1| zinc finger X-chromosomal protein isoform 1 [Macaca mulatta]
Length = 802
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 518 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 566
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 567 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 600
>gi|441638122|ref|XP_004090112.1| PREDICTED: transcriptional repressor CTCFL [Nomascus leucogenys]
Length = 322
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C C Y ++ + ++ H H G++ F+CC CSY + KL+ H++
Sbjct: 103 FKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMR 151
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H VR + F C C Y + + ++ H H
Sbjct: 102 PFKCSMCK-YASVEASKLKRH-------VRSHTGERPFQCCQCSYASRDTYKLKRHMRTH 153
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 154 SGEKPYECHICHARFTQNGTMKTHILQKHSENV 186
>gi|403282637|ref|XP_003932750.1| PREDICTED: zinc finger protein 217 [Saimiri boliviensis
boliviensis]
Length = 1074
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C C F + + H H G+K +KC C Y A QK L++H++ H K D
Sbjct: 489 CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCDYAAAQKTSLRYHLERHHKEKQAD 544
>gi|383421397|gb|AFH33912.1| zinc finger X-chromosomal protein isoform 1 [Macaca mulatta]
Length = 803
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 519 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 567
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 568 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 601
>gi|358417007|ref|XP_002702019.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 91 [Bos taurus]
Length = 925
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 56 CKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQF 115
CK F+ D N +M SE P + YK C CD + + H IH G K +
Sbjct: 195 CKGFSHKDENAVMHPSELLPDHETQNKRPYK--CNECDITFLQDSELTRHQRIHTGGKPY 252
Query: 116 KCCLCSYGAYQKEKLQFHVK 135
KC +C Q KL H +
Sbjct: 253 KCDVCGKAFNQTRKLAIHWR 272
>gi|260823070|ref|XP_002604006.1| hypothetical protein BRAFLDRAFT_71705 [Branchiostoma floridae]
gi|229289331|gb|EEN60017.1| hypothetical protein BRAFLDRAFT_71705 [Branchiostoma floridae]
Length = 243
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++D + L++H +V+ K ++C C Y T N+ H H
Sbjct: 92 PYKCDQC-DYSAADKSTLVKH------LVKHTGEK-PYMCGECGYRTTNKTNLSVHMRTH 143
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
G+K +KC C Y A QK L H+ N
Sbjct: 144 TGEKPYKCDQCDYSATQKINLVQHMTN 170
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T + H H G+K +KC C Y A ++ L H +
Sbjct: 9 YMCGECGYKTAKKSTLSRHMRTHTGEKPYKCDQCDYSAAERTTLANHQR 57
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 19/105 (18%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSE----------NCPCMVRPDPVKYKFICV 90
+M P C C + +NL+ + +CPC+ + C
Sbjct: 139 HMRTHTGEKPYKCDQCDYSATQKINLVQHMTNHTGEKPYKCGDCPCL---------YKCD 189
Query: 91 ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
CDY ++ H H G+K + C C Y A K L H++
Sbjct: 190 QCDYSATEKSHLDRHLRKHTGEKPYMCGECGYRANYKASLSRHMR 234
>gi|417411510|gb|JAA52189.1| Putative zfx / zfy transcription activation region, partial
[Desmodus rotundus]
Length = 541
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 257 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 305
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 306 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 339
>gi|395536583|ref|XP_003770292.1| PREDICTED: zinc finger protein 729-like [Sarcophilus harrisii]
Length = 1397
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 79 RPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
RP K FIC C S+ ++ H IH+G+ +F+C +C QKE L H K
Sbjct: 1255 RPHSGKKSFICHECGKTFNESEALKKHQKIHIGETRFECNVCKKAFSQKELLISHQKTHT 1314
Query: 139 STKV 142
S K+
Sbjct: 1315 SVKL 1318
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C C+ T S+ + L+ H R P + FIC+ C ++ ++ H H G+
Sbjct: 660 CNDCEK-TFSEKDHLITHQ-------RTHPGRKSFICIECGETFSENEALKKHQTTHSGE 711
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
+F+C +C QKE L H K S K+
Sbjct: 712 TRFECNVCKKAFSQKEYLISHQKTHTSVKL 741
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C S+ ++ H IH GDK F+C +C Q+E L H K S K
Sbjct: 1151 FTCNECGKAFGDSEALKTHQKIHTGDKPFECNVCKKAFSQQEHLIVHKKTHASAK 1205
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F C+ C S+ ++ H H G+ +F+C +C QKE L H K S K+
Sbjct: 1039 FTCIECGKTFNESETLKKHQTTHSGETRFECNVCKKAFSQKEYLISHQKTHTSVKL 1094
>gi|301774102|ref|XP_002922470.1| PREDICTED: zinc finger protein ZFAT-like [Ailuropoda melanoleuca]
Length = 1113
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 933 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 990
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
+++H L+H D KQFKC +C Y A QK +L H++ S K+ D
Sbjct: 1007 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQHASFKIPD 1051
>gi|444730846|gb|ELW71219.1| Zinc finger protein 217 [Tupaia chinensis]
Length = 1056
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
C C F + + H H G+K +KC C Y A QK L++H++ H K D
Sbjct: 482 CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCDYAAAQKTSLRYHLERHHKDKQGD 537
>gi|390478519|ref|XP_003735526.1| PREDICTED: zinc finger protein 850 [Callithrix jacchus]
Length = 1006
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Query: 50 PQSCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
P CK C K F S + L EH VR + F CV C IS N+ H I
Sbjct: 415 PYECKECGKAFARS--SRLSEH-------VRTHTGEKPFECVKCGKAFAISSNLSGHLRI 465
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
H G+K F+C C L H++ HSTK
Sbjct: 466 HTGEKPFECLECGKAFTHSSSLNNHMRT-HSTK 497
>gi|390349369|ref|XP_003727203.1| PREDICTED: zinc finger protein 236-like [Strongylocentrotus
purpuratus]
Length = 788
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 42 MSFLNSVIPQSCKHCKNFTS---SDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTII 98
MS+ N + + + CK+F + SD+ L + ++ N D Y+ C C +
Sbjct: 500 MSYQNGEVNGNFQECKDFEAGGGSDLPLNLTNA-NSLGDGYEDLEAYQAQCHICGQYYKT 558
Query: 99 SQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
QN+ H IH G++ C +CS Q L+ H+K+KH
Sbjct: 559 RQNLSIHMRIHTGERPHSCSICSKKFIQPHHLKAHLKSKH 598
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
FIC C ++N+ H IH G++ + C LCS Q + H+ +KH
Sbjct: 210 FICQECGKLCKTNRNLMIHKRIHTGERPYNCTLCSLTFRQSHHRKAHMLSKHG 262
>gi|148697801|gb|EDL29748.1| mCG113954, isoform CRA_a [Mus musculus]
gi|148697802|gb|EDL29749.1| mCG113954, isoform CRA_a [Mus musculus]
Length = 601
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 515 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 563
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 564 HTGEKPYECQYCEYRSADSSNLKTHVKTKHSKEM 597
>gi|260804322|ref|XP_002597037.1| hypothetical protein BRAFLDRAFT_145009 [Branchiostoma floridae]
gi|229282299|gb|EEN53049.1| hypothetical protein BRAFLDRAFT_145009 [Branchiostoma floridae]
Length = 351
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +FT++ N L H MV K +F+C C + T
Sbjct: 146 HMRRHTGEKPHMCDQC-DFTTAWKNHLKRH------MVTHTGEK-RFMCGICGHRTPDKA 197
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N+ H H G+K FKC LC Y + K L H+
Sbjct: 198 NIVRHIRRHTGEKPFKCDLCDYSSADKGNLDRHI 231
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+R + F C CDY + N+ H L H G+K + C C + K +L H++
Sbjct: 203 IRRHTGEKPFKCDLCDYSSADKGNLDRHILKHTGEKPYMCGECGFRTTYKSELTIHMR 260
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+C CD+ T +++ H + H G+K+F C +C + K + H++
Sbjct: 157 MCDQCDFTTAWKNHLKRHMVTHTGEKRFMCGICGHRTPDKANIVRHIRR 205
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CD+ + ++ H L+H G+K + C C + K L H+K
Sbjct: 296 FKCDQCDHSAVRRSDLDKHMLVHTGEKPYMCGECYFRTANKSNLAVHMKQ 345
>gi|426236037|ref|XP_004011981.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein ZFAT [Ovis
aries]
Length = 1228
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 89 CVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 874 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 926
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K FT N + + + +R + + C C Y + I N+ H H G+K F
Sbjct: 265 KIFTCEYCNKVFKFKHSLQAHLRIHTKEKPYKCSQCSYASAIKANLNVHLRKHTGEK-FA 323
Query: 117 CCLCSYGAYQKEKLQFHVKNKH 138
C CS+ K L+ HV+ H
Sbjct: 324 CDCCSFTCLSKGHLKVHVERVH 345
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 79 RPDPVKYK-FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
R P + K F C C+ +++ H IH +K +KC CSY + K L H++ K
Sbjct: 258 RLGPTQLKIFTCEYCNKVFKFKHSLQAHLRIHTKEKPYKCSQCSYASAIKANLNVHLR-K 316
Query: 138 HS 139
H+
Sbjct: 317 HT 318
>gi|395518796|ref|XP_003763543.1| PREDICTED: zinc finger X-chromosomal protein isoform 2 [Sarcophilus
harrisii]
Length = 723
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
+LL HS+N P ICV C ++ H IH G+K ++C C Y +
Sbjct: 455 HLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRS 503
Query: 125 YQKEKLQFHVKNKHSTKV 142
L+ HVK KHS ++
Sbjct: 504 ADSSNLKTHVKTKHSKEM 521
>gi|390352602|ref|XP_003727932.1| PREDICTED: zinc finger protein 84-like [Strongylocentrotus
purpuratus]
Length = 507
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 15/119 (12%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
C YC+K + I ++ P C HC S NL+
Sbjct: 10 CPYCDKGFSQKTKLTI-------HLRTHTGEKPFKCSHCDKGFSHQCNLIRH-------- 54
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
VR + ++ C C+ ++ +H +H G+K F+C C G QK KL H++
Sbjct: 55 VRTHTGEMRYQCPYCEKGFSQKSSLSSHLRVHTGEKPFRCSQCDKGFSQKTKLTIHLRT 113
>gi|86561653|ref|NP_491843.3| Protein ZC328.2 [Caenorhabditis elegans]
gi|351064802|emb|CCD73296.1| Protein ZC328.2 [Caenorhabditis elegans]
Length = 386
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
F C C F S ++R H H +K + CC+C+Y A +++ L H+ +H
Sbjct: 275 FKCEDCGRFFSRSDHLRTHRRTHTDEKPYHCCVCNYSARRRDVLTRHMSTRH 326
>gi|395518794|ref|XP_003763542.1| PREDICTED: zinc finger X-chromosomal protein isoform 1 [Sarcophilus
harrisii]
Length = 794
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
+LL HS+N P ICV C ++ H IH G+K ++C C Y +
Sbjct: 526 HLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRS 574
Query: 125 YQKEKLQFHVKNKHSTKV 142
L+ HVK KHS ++
Sbjct: 575 ADSSNLKTHVKTKHSKEM 592
>gi|126325555|ref|XP_001362448.1| PREDICTED: zinc finger X-chromosomal protein-like [Monodelphis
domestica]
Length = 794
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
+LL HS+N P ICV C ++ H IH G+K ++C C Y +
Sbjct: 526 HLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRS 574
Query: 125 YQKEKLQFHVKNKHSTKV 142
L+ HVK KHS ++
Sbjct: 575 ADSSNLKTHVKTKHSKEM 592
>gi|2576307|emb|CAA05200.1| Zfx [Monodelphis domestica]
Length = 180
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
CK C ++ +++ LL H ++ K+ ICV C ++ H IH G+
Sbjct: 73 CKFC-DYETAEQGLLNRH------LLAVHSKKFPHICVECGKGFRHPSELKKHMRIHTGE 125
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
K ++C C Y + L+ HVK KHS ++
Sbjct: 126 KPYQCQYCEYRSADSSNLKTHVKTKHSKEM 155
>gi|357609802|gb|EHJ66686.1| putative CTCF-like protein [Danaus plexippus]
Length = 671
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 46 NSVIPQSCKHCKN-FTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRN 104
N V P CK+CK+ FT+S L+ H +P C CDY ++ +R
Sbjct: 258 NGVKPHVCKYCKSPFTTS--GELVRHVRYRHTHEKP------HKCSECDYASVELSKLRR 309
Query: 105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H H G++ ++C C+Y + KL+ H++
Sbjct: 310 HVRCHTGERPYQCPHCTYASPDTFKLKRHLR 340
>gi|195062628|ref|XP_001996227.1| GH22314 [Drosophila grimshawi]
gi|193899722|gb|EDV98588.1| GH22314 [Drosophila grimshawi]
Length = 333
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
FIC C + + +N++ H L H G+K F+C C Y K LQ H++ KH ++
Sbjct: 256 FICDLCGHQSSNQKNLQIHILRHKGEKNFECEECGLKHYSKYLLQLHIRVKHRGEM 311
>gi|410987791|ref|XP_004000178.1| PREDICTED: zinc finger protein ZFAT isoform 2 [Felis catus]
Length = 1184
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 89 CVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 823 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 875
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 48 VIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL 107
V P C C+ T S NL + + + +C C +++H L
Sbjct: 847 VKPFKCSLCEYATRSKSNLKAHMNRH--------STEKTHLCDMCGKKFKSKGTLKSHKL 898
Query: 108 IHLGD-KQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+H D KQFKC +C Y A QK +L H++ S K
Sbjct: 899 LHTADGKQFKCTVCDYTAAQKPQLLRHMEQHASFK 933
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 79 RPDPVKYK-FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
R P + K F C C+ +++ H IH +K +KC CSY + K L H++ K
Sbjct: 200 RLGPTQLKIFTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLR-K 258
Query: 138 HS 139
H+
Sbjct: 259 HT 260
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K FT N + + + +R + + C C Y + I N+ H H G+K F
Sbjct: 207 KIFTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEK-FA 265
Query: 117 CCLCSYGAYQKEKLQFHVKNKHSTKVK 143
C C++ K L+ HV+ H KVK
Sbjct: 266 CDYCAFTCLSKGHLKVHVERVHK-KVK 291
>gi|410036262|ref|XP_003309529.2| PREDICTED: zinc finger protein 142 [Pan troglodytes]
Length = 1603
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 453 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 504
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 505 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 535
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 212 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 267
>gi|354491026|ref|XP_003507657.1| PREDICTED: zinc finger protein 142-like isoform 3 [Cricetulus
griseus]
Length = 1641
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K ++C LCSY +L++H++
Sbjct: 1406 YKCTDCAYSTKNRQKITWHSRIHTGEKPYRCHLCSYACADPSRLKYHMR 1454
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K +C LC Y A ++ L H+ + H
Sbjct: 184 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHQCPLCHYSAVERNALNRHMASMH 239
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++C C + +R+H L H F C LCSY A QK ++ HV+ H +
Sbjct: 1547 YVCNVCHRAFRWAAGLRHHALTHTDRHPFFCRLCSYKAKQKFQVVKHVRRHHPDQA 1602
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T + H H
Sbjct: 425 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLSVHMRKH 476
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 477 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 507
>gi|410341527|gb|JAA39710.1| zinc finger protein, X-linked [Pan troglodytes]
Length = 803
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 519 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 567
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 568 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 601
>gi|334321862|ref|XP_003340164.1| PREDICTED: zinc finger protein 281 [Monodelphis domestica]
Length = 919
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 279 PSQKPHICEHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 332
>gi|260832822|ref|XP_002611356.1| hypothetical protein BRAFLDRAFT_135918 [Branchiostoma floridae]
gi|229296727|gb|EEN67366.1| hypothetical protein BRAFLDRAFT_135918 [Branchiostoma floridae]
Length = 386
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
FIC C Y T ++ H H G+K +KC LC Y A +K L+ H + KH+
Sbjct: 8 FICGECGYRTAKKTDLSIHMRTHTGEKPYKCDLCDYAATRKFHLEIH-RRKHT 59
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 91 ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
AC Y T + H H G+K FKC LC Y A QK KL H ++KHS
Sbjct: 156 ACGYRTAHKYTLSIHMRTHTGEKPFKCDLCDYSAAQKSKLDVH-RSKHS 203
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T ++ H H G+K +KC C Y A QK L H
Sbjct: 64 YMCGKCGYKTSDKSDLSRHIRTHTGEKPYKCDQCDYSAAQKSNLDIH 110
>gi|260819198|ref|XP_002604924.1| hypothetical protein BRAFLDRAFT_217118 [Branchiostoma floridae]
gi|229290253|gb|EEN60934.1| hypothetical protein BRAFLDRAFT_217118 [Branchiostoma floridae]
Length = 311
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 46 NSVIPQSCKHCK-NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRN 104
N V P C C +F +S LM H +P C CDY ++ ++
Sbjct: 59 NGVKPHKCDQCPMSFVTS--GELMRHRRYKHTHEKPHK------CTMCDYASVEISKLKR 110
Query: 105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
H H G++ F+C +CSY + KL+ H++
Sbjct: 111 HMRSHTGERPFQCGMCSYASPDSYKLKRHMRT 142
>gi|440901954|gb|ELR52811.1| Zinc finger protein ZFAT, partial [Bos grunniens mutus]
Length = 1217
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 851 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 908
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+++H L+H D KQFKC +C Y A QK +L H++ S K
Sbjct: 925 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQHASFK 966
>gi|73974640|ref|XP_848258.1| PREDICTED: zinc finger protein ZFAT isoform 5 [Canis lupus
familiaris]
Length = 1242
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 876 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 933
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+++H L+H D KQFKC +C Y A QK +L H++ S K
Sbjct: 950 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQHASFK 991
>gi|384949294|gb|AFI38252.1| zinc finger X-chromosomal protein isoform 1 [Macaca mulatta]
Length = 802
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 518 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 566
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 567 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 600
>gi|351703876|gb|EHB06795.1| Zinc finger X-chromosomal protein [Heterocephalus glaber]
Length = 794
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
+LL HS+N P ICV C ++ H IH G+K ++C C Y +
Sbjct: 526 HLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRS 574
Query: 125 YQKEKLQFHVKNKHSTKV 142
L+ HVK KHS ++
Sbjct: 575 ADSSNLKTHVKTKHSREM 592
>gi|345327008|ref|XP_003431115.1| PREDICTED: zinc finger X-chromosomal protein-like isoform 2
[Ornithorhynchus anatinus]
Length = 743
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
+LL HS+N P +CV C ++ H IH G+K ++C C Y +
Sbjct: 474 HLLAVHSKNFP-----------HVCVECGKGFRHPSELKKHMRIHTGEKPYQCQFCPYRS 522
Query: 125 YQKEKLQFHVKNKHSTKV 142
L+ HVK KHS +
Sbjct: 523 ADSSNLKTHVKTKHSKET 540
>gi|410341517|gb|JAA39705.1| zinc finger protein, X-linked [Pan troglodytes]
Length = 799
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 515 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 563
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 564 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 597
>gi|410261676|gb|JAA18804.1| zinc finger protein, Y-linked [Pan troglodytes]
Length = 801
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 599
>gi|344255782|gb|EGW11886.1| Zinc finger protein 142 [Cricetulus griseus]
Length = 1825
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K ++C LCSY +L++H++
Sbjct: 1590 YKCTDCAYSTKNRQKITWHSRIHTGEKPYRCHLCSYACADPSRLKYHMR 1638
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K +C LC Y A ++ L H+ + H
Sbjct: 368 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHQCPLCHYSAVERNALNRHMASMH 423
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++C C + +R+H L H F C LCSY A QK ++ HV+ H +
Sbjct: 1731 YVCNVCHRAFRWAAGLRHHALTHTDRHPFFCRLCSYKAKQKFQVVKHVRRHHPDQA 1786
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T + H H
Sbjct: 609 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLSVHMRKH 660
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 661 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 691
>gi|315139197|gb|ADT80791.1| X-linked zinc finger protein [Ailurus fulgens]
Length = 132
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 41 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGLRHPSELKKHMRI 89
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 90 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 123
>gi|270311000|gb|ACZ72608.1| Y-linked zinc finger protein [Bradypus torquatus]
Length = 141
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 51 QSCKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
+CK C+ T+ +LL HS+N P ICV C ++ H
Sbjct: 45 HTCKFCEYETAEQGLLSRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHM 93
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
IH G+K ++C C Y + L+ HVK KHS ++
Sbjct: 94 RIHTGEKPYQCQYCEYSSADSSNLKTHVKTKHSKEM 129
>gi|16416471|gb|AAL18260.1|AF032866_1 X-linked zinc finger protein [Bos taurus]
Length = 800
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNPHLLAVHSKNFP-----------HICVECGKGFRHPSKLKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSANSSNLKTHVKTKHSKEM 598
>gi|410306664|gb|JAA31932.1| zinc finger protein, Y-linked [Pan troglodytes]
gi|410341519|gb|JAA39706.1| zinc finger protein, X-linked [Pan troglodytes]
Length = 801
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 599
>gi|354491022|ref|XP_003507655.1| PREDICTED: zinc finger protein 142-like isoform 1 [Cricetulus
griseus]
Length = 1843
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K ++C LCSY +L++H++
Sbjct: 1608 YKCTDCAYSTKNRQKITWHSRIHTGEKPYRCHLCSYACADPSRLKYHMR 1656
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K +C LC Y A ++ L H+ + H
Sbjct: 386 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHQCPLCHYSAVERNALNRHMASMH 441
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++C C + +R+H L H F C LCSY A QK ++ HV+ H +
Sbjct: 1749 YVCNVCHRAFRWAAGLRHHALTHTDRHPFFCRLCSYKAKQKFQVVKHVRRHHPDQA 1804
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T + H H
Sbjct: 627 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLSVHMRKH 678
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 679 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 709
>gi|149638244|ref|XP_001515796.1| PREDICTED: zinc finger X-chromosomal protein-like isoform 1
[Ornithorhynchus anatinus]
Length = 814
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
+LL HS+N P +CV C ++ H IH G+K ++C C Y +
Sbjct: 545 HLLAVHSKNFP-----------HVCVECGKGFRHPSELKKHMRIHTGEKPYQCQFCPYRS 593
Query: 125 YQKEKLQFHVKNKHSTKV 142
L+ HVK KHS +
Sbjct: 594 ADSSNLKTHVKTKHSKET 611
>gi|109101058|ref|XP_001090487.1| PREDICTED: zinc finger protein 142 [Macaca mulatta]
Length = 1683
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 452 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 503
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 504 TGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 534
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1448 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1496
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 211 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 266
>gi|383421437|gb|AFH33932.1| zinc finger protein 142 [Macaca mulatta]
Length = 1659
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 428 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 479
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 480 TGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 510
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1424 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1472
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 187 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 242
>gi|355565186|gb|EHH21675.1| hypothetical protein EGK_04798 [Macaca mulatta]
Length = 1659
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 428 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 479
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 480 TGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 510
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1424 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1472
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 187 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 242
>gi|443714940|gb|ELU07137.1| hypothetical protein CAPTEDRAFT_41560, partial [Capitella teleta]
Length = 205
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C C++ + HTL HLG+K FKC C + +K L+FH++
Sbjct: 71 CDQCEFACFTKHEFKRHTLNHLGEKPFKCTECDFATVEKMNLKFHMR 117
>gi|410341521|gb|JAA39707.1| zinc finger protein, X-linked [Pan troglodytes]
Length = 800
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 598
>gi|391348269|ref|XP_003748370.1| PREDICTED: zinc finger protein 64 homolog, isoforms 3 and 4-like
[Metaseiulus occidentalis]
Length = 205
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 14/86 (16%)
Query: 53 CKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
CKHC T L L HS P F C C+Y T + N+ H H
Sbjct: 49 CKHCNYLTPYQAALKTHLKSHSGEKP-----------FKCQFCEYRTGLKHNLETHLRTH 97
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K + C C Y K L+ HV+
Sbjct: 98 TGEKPYSCPYCPYKCAAKGNLKLHVR 123
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 19/108 (17%)
Query: 28 DIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKF 87
D+D + Q PN+ +++ + +H T+S+ P +F
Sbjct: 7 DLDQVM---QNLPNLHLFSNLQSLNLEHLIALTNSEA----------------QPAVKQF 47
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C C+Y T ++ H H G+K FKC C Y K L+ H++
Sbjct: 48 KCKHCNYLTPYQAALKTHLKSHSGEKPFKCQFCEYRTGLKHNLETHLR 95
>gi|395531071|ref|XP_003767606.1| PREDICTED: zinc finger protein 281, partial [Sarcophilus harrisii]
Length = 783
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 143 PSQKPHICEHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 196
>gi|297259551|ref|XP_001093318.2| PREDICTED: zinc finger protein 64 homolog, isoforms 3 and 4-like
[Macaca mulatta]
Length = 329
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 44 FLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMR 103
F P C+ C S NL M C V+P C CDY + S +++
Sbjct: 7 FARRDKPHKCEFCDKCFSRKDNLTMH--MRCHTSVKP------HKCHLCDYAAVDSSSLK 58
Query: 104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
H IH ++ +KC LC Y + +L H+++
Sbjct: 59 KHLRIHSDERPYKCQLCPYASRNSSQLTVHLRS 91
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C IS +++ H ++H G+K FKC C K L+ H++ KH+ K
Sbjct: 98 FQCWLCSAKFKISSDLKRHMIVHSGEKPFKCEFCDVRCTMKANLKSHIRIKHTFK 152
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C HC F D L+EHS R + C C Y + +R H+ +H D
Sbjct: 153 CLHCA-FQGRDRADLLEHS-------RLHQADHPEKCPECSYSCSSAAALRVHSRVHCKD 204
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+ FKC CS+ + L H+ H + K
Sbjct: 205 RPFKCDFCSFDTKRPSSLAKHIDKVHRDEAK 235
>gi|270311006|gb|ACZ72611.1| Y-linked zinc finger protein [Bradypus variegatus]
Length = 132
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 51 QSCKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
+CK C+ T+ +LL HS+N P ICV C ++ H
Sbjct: 39 HTCKFCEYETAEQGLLSRHLLAVHSKNFP-----------HICVECGKGCRHPSELKKHM 87
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
IH G+K ++C C Y + L+ HVK KHS ++
Sbjct: 88 RIHTGEKPYQCQYCEYSSADSSNLKTHVKTKHSKEM 123
>gi|9623268|gb|AAF90088.1| zinc finger protein Zfy [Lynx lynx]
Length = 392
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 108 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 156
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK+KHS ++
Sbjct: 157 HTGEKPYQCQYCEYRSADSSNLKTHVKSKHSKEM 190
>gi|410219164|gb|JAA06801.1| zinc finger protein, X-linked [Pan troglodytes]
gi|410341511|gb|JAA39702.1| zinc finger protein, X-linked [Pan troglodytes]
gi|410341513|gb|JAA39703.1| zinc finger protein, Y-linked [Pan troglodytes]
gi|410341525|gb|JAA39709.1| zinc finger protein, X-linked [Pan troglodytes]
Length = 800
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 598
>gi|395838911|ref|XP_003792349.1| PREDICTED: zinc finger protein 281 [Otolemur garnettii]
Length = 899
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 259 PSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 312
>gi|354491024|ref|XP_003507656.1| PREDICTED: zinc finger protein 142-like isoform 2 [Cricetulus
griseus]
Length = 1740
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K ++C LCSY +L++H++
Sbjct: 1505 YKCTDCAYSTKNRQKITWHSRIHTGEKPYRCHLCSYACADPSRLKYHMR 1553
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K +C LC Y A ++ L H+ + H
Sbjct: 283 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHQCPLCHYSAVERNALNRHMASMH 338
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++C C + +R+H L H F C LCSY A QK ++ HV+ H +
Sbjct: 1646 YVCNVCHRAFRWAAGLRHHALTHTDRHPFFCRLCSYKAKQKFQVVKHVRRHHPDQA 1701
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T + H H
Sbjct: 524 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLSVHMRKH 575
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 576 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 606
>gi|260817661|ref|XP_002603704.1| hypothetical protein BRAFLDRAFT_126889 [Branchiostoma floridae]
gi|229289026|gb|EEN59715.1| hypothetical protein BRAFLDRAFT_126889 [Branchiostoma floridae]
Length = 556
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y + S ++ H H GD+ FKC C Y + +K+ ++ H + HS
Sbjct: 226 YMCPHCTYASSNSSDLVKHVRRHTGDRLFKCRHCDYTSTEKQTVEVHERGSHS 278
>gi|157822815|ref|NP_001101695.1| zinc finger protein 142 [Rattus norvegicus]
gi|149016114|gb|EDL75360.1| zinc finger protein 142 (clone pHZ-49) (predicted) [Rattus
norvegicus]
Length = 1668
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K ++C LCSY +L++H++
Sbjct: 1433 YKCTDCAYSTKNRQKITWHSRIHTGEKPYRCHLCSYACADPSRLKYHMR 1481
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K +C LC Y A ++ L H+ + H
Sbjct: 195 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHRCPLCHYSAVERNALNRHMASMH 250
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 16/124 (12%)
Query: 18 CLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCM 77
C CN + + V I H M P C+ C +FT DV+ L +H M
Sbjct: 411 CSECN-FATAHKRVLIRH------MLLHTGEKPHKCELC-DFTCRDVSYLSKH------M 456
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+ K ++C C Y T + H H GD +++C CSY ++ ++L H K +
Sbjct: 457 LTHSNTK-DYMCTECGYVTKWKHYLSVHMRKHAGDLRYQCNQCSYRCHRADQLSSH-KLR 514
Query: 138 HSTK 141
H K
Sbjct: 515 HQGK 518
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 67 LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQ 126
L +HSE P ++C C + +R+H L H F C LCSY A Q
Sbjct: 1565 LRKHSEAKP-----------YVCNVCHRAFRWAAGLRHHALTHTDRHPFFCRLCSYKAKQ 1613
Query: 127 KEKLQFHVKNKHSTKV 142
K ++ HV+ H +
Sbjct: 1614 KFQVVKHVRRHHPDQA 1629
>gi|301070254|gb|ADK55547.1| zinc finger protein 513, 3 prime [Zonotrichia albicollis]
Length = 447
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY N++ H IH GDK F+C LCSY Q L+ H+
Sbjct: 342 YKCQLCDYACGNLANLKRHGRIHSGDKPFQCSLCSYSCNQSMNLKRHM 389
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 20/141 (14%)
Query: 6 QC-LLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCP-----------NMSFLNSVIPQSC 53
QC L + S ++CL C + CQ CP +M N P +C
Sbjct: 47 QCGLQLAASLGQSCLQCAGAEGGRSQRIVYSCQLCPFASHYSSHLKRHMKTHNGEKPFAC 106
Query: 54 KHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDK 113
C ++ VNL +R + + C C + N++ H +H DK
Sbjct: 107 PQCAYASAQLVNLTRH--------LRTHTGEKPYRCTGCSFACSSLGNLKRHERVHSQDK 158
Query: 114 QFKCCLCSYGAYQKEKLQFHV 134
F+C C Y Q L+ H+
Sbjct: 159 PFQCAACDYRCNQSRNLKRHM 179
>gi|357618481|gb|EHJ71442.1| hypothetical protein KGM_19412 [Danaus plexippus]
Length = 366
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 72 ENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQ 131
E+ +R + + C C + N+ H L H GD FKC C G Y K L
Sbjct: 249 ESLKMHMRSHTGEKPYQCSECSSRFVNKSNLNKHMLTHKGDHDFKCEACGRGFYTKRDLD 308
Query: 132 FHVKNKHSTKVKD 144
H K H T +KD
Sbjct: 309 LHFKVDH-TGIKD 320
>gi|260823118|ref|XP_002604030.1| hypothetical protein BRAFLDRAFT_71680 [Branchiostoma floridae]
gi|229289355|gb|EEN60041.1| hypothetical protein BRAFLDRAFT_71680 [Branchiostoma floridae]
Length = 440
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C T+ VNL S + R P K C CDY T + H H
Sbjct: 216 PYMCEECGYRTTQKVNL----SRHIRTHTREKPYK----CDQCDYSTAWISALNQHLAKH 267
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
GDK + C C Y QK L H+
Sbjct: 268 TGDKPYMCGECGYRTAQKSDLYKHI 292
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Query: 38 TCPNMSFLNSVI-------PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICV 90
+ + S+LN + P +C C + ++D + L H +R + + C
Sbjct: 309 SAAHKSYLNRHLRKHTGDKPYTCGEC-GYRAADRSHLSRH-------MRIHTGEKPYKCD 360
Query: 91 ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
CDY + ++ +H H G+K + C C Y A Q+ L H++
Sbjct: 361 QCDYSAAVKHHLIDHQTRHSGEKPYMCGECGYRAAQRSALSQHMR 405
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
F+C C Y T ++ H H G+K +KC C Y A QK L H+
Sbjct: 161 FMCGECGYRTDRKSHLSRHMRTHTGEKPYKCDQCDYSAAQKGHLDQHL 208
>gi|158819042|ref|NP_001103644.1| transcriptional repressor CTCFL [Sus scrofa]
gi|147223335|emb|CAN13249.1| CCCTC-binding factor (zinc finger protein)-like [Sus scrofa]
gi|147223433|emb|CAN13126.1| CCCTC-binding factor (zinc finger protein)-like [Sus scrofa]
Length = 647
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 341 FKCSMCKYASVEASKLKRHIRSHTGERPFQCPLCSYASKDTYKLKRHMRTHSGEK 395
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H +R + F C C Y + + ++ H H
Sbjct: 340 PFKCSMCK-YASVEASKLKRH-------IRSHTGERPFQCPLCSYASKDTYKLKRHMRTH 391
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ HV KHS V
Sbjct: 392 SGEKPYECHICHARFTQSGTMKIHVLQKHSENV 424
>gi|73992358|ref|XP_534463.2| PREDICTED: transcriptional repressor CTCFL isoform 1 [Canis lupus
familiaris]
Length = 582
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F C C Y ++ + ++ H H G++ F+C LCSY + KL+ H++ K
Sbjct: 346 FKCSMCKYASVEASKLKRHIRSHTGERPFQCLLCSYASKDTYKLKRHMRTHSGEK 400
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H +R + F C+ C Y + + ++ H H
Sbjct: 345 PFKCSMCK-YASVEASKLKRH-------IRSHTGERPFQCLLCSYASKDTYKLKRHMRTH 396
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 397 SGEKPYECHVCHARFTQSGTMKIHILQKHSENV 429
>gi|410341523|gb|JAA39708.1| zinc finger protein, X-linked [Pan troglodytes]
Length = 800
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 516 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 564
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 565 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 598
>gi|326913551|ref|XP_003203100.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger X-chromosomal
protein-like [Meleagris gallopavo]
Length = 793
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
+LL HS+N P ICV C ++ H IH G+K ++C C Y +
Sbjct: 525 HLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRS 573
Query: 125 YQKEKLQFHVKNKHSTKV 142
L+ HVK KHS +
Sbjct: 574 ADSSNLKTHVKTKHSKET 591
>gi|119591036|gb|EAW70630.1| zinc finger protein 142 (clone pHZ-49), isoform CRA_a [Homo
sapiens]
gi|119591038|gb|EAW70632.1| zinc finger protein 142 (clone pHZ-49), isoform CRA_a [Homo
sapiens]
Length = 1687
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 428 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 479
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 480 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 510
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1452 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1500
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 187 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 242
>gi|403266864|ref|XP_003925580.1| PREDICTED: zinc finger protein 142 [Saimiri boliviensis
boliviensis]
Length = 1831
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 612 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 663
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 664 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 694
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1596 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1644
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 371 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 426
>gi|402889405|ref|XP_003908007.1| PREDICTED: zinc finger protein 142 [Papio anubis]
Length = 1843
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 612 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 663
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 664 TGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 694
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1608 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1656
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 371 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 426
>gi|397495674|ref|XP_003818672.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 142 [Pan
paniscus]
Length = 1870
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 611 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 662
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 663 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 693
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1635 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1683
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 370 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 425
>gi|355747693|gb|EHH52190.1| hypothetical protein EGM_12589 [Macaca fascicularis]
Length = 1659
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 428 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 479
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 480 TGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 510
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1424 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1472
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 187 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 242
>gi|75069666|sp|Q52V16.1|ZFY_GORGO RecName: Full=Zinc finger Y-chromosomal protein
gi|62728523|gb|AAX94761.1| ZFY [Gorilla gorilla]
Length = 801
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 599
>gi|40788922|dbj|BAA13242.2| KIAA0236 [Homo sapiens]
Length = 1696
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 437 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 488
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 489 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 519
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1461 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1509
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 196 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 251
>gi|395840114|ref|XP_003792910.1| PREDICTED: zinc finger protein ZFAT isoform 1 [Otolemur garnettii]
Length = 1179
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 814 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCTLCEYATRSKSNLKAHM-NRHSTE 871
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 888 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 924
>gi|260815769|ref|XP_002602645.1| hypothetical protein BRAFLDRAFT_225324 [Branchiostoma floridae]
gi|229287956|gb|EEN58657.1| hypothetical protein BRAFLDRAFT_225324 [Branchiostoma floridae]
Length = 227
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 50 PQSCKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
P C HC S D +L +H+ P F+C C Y + + + H
Sbjct: 147 PYKCNHCDYLARSRAGLDYHLKTKHTGQKP-----------FMCGICGYRSALP--LTRH 193
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
H G+K +KC C Y A +K L +H + KH+
Sbjct: 194 MRTHTGEKPYKCDQCDYSAARKYSLDYHRQTKHN 227
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+R + ++C C Y ++ H H G+K +KC C Y A QK L H +K
Sbjct: 82 IRTQTGENPYVCEECGYSVTQKSHLSQHMRTHTGEKPYKCDQCDYSAAQKSTLDQHHLSK 141
Query: 138 HS 139
H+
Sbjct: 142 HT 143
>gi|427793803|gb|JAA62353.1| Putative zinc finger protein, partial [Rhipicephalus pulchellus]
Length = 234
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F CV CD F N+ H IH G++ F C C+ +K++L H+ +H K
Sbjct: 179 FFCVHCDAFFARKANLTEHIRIHTGERPFSCVHCNASFTRKKQLMCHMSRQHGKK 233
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P SC HC N + S +LM H VR + F CV C+ + + + H H
Sbjct: 122 PFSCVHC-NASFSYKRILMRH-------VRTHTRERPFFCVHCNASFVTERRLITHKRTH 173
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G++ F C C +K L H++
Sbjct: 174 TGERLFFCVHCDAFFARKANLTEHIR 199
>gi|57113889|ref|NP_001009003.1| zinc finger Y-chromosomal protein [Pan troglodytes]
gi|55976642|sp|Q6B4Z5.1|ZFY_PANTR RecName: Full=Zinc finger Y-chromosomal protein
gi|50844487|gb|AAT84367.1| ZFY [Pan troglodytes]
gi|62728519|gb|AAX94760.1| ZFY [Pan troglodytes]
Length = 801
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 599
>gi|380788637|gb|AFE66194.1| zinc finger Y-chromosomal protein isoform 1 [Macaca mulatta]
Length = 801
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 599
>gi|260832826|ref|XP_002611358.1| hypothetical protein BRAFLDRAFT_73247 [Branchiostoma floridae]
gi|229296729|gb|EEN67368.1| hypothetical protein BRAFLDRAFT_73247 [Branchiostoma floridae]
Length = 396
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H IH G+K +KC LC Y QK L H+
Sbjct: 19 YMCGECGYRTARKSHLSQHMRIHTGEKPYKCDLCDYSTAQKSNLDCHL 66
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 22/47 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T + H H G+K FKC C Y A QK L H
Sbjct: 159 YMCGECGYRTAHKSALSQHMRTHTGEKPFKCDQCDYSAAQKSTLDCH 205
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 43/123 (34%), Gaps = 20/123 (16%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCM-----------------VRP 80
+M P C C T+ NL M+H+ P M +R
Sbjct: 233 HMRTHTGERPFRCDQCDYSTAQKSNLDCHRMKHTGEKPYMCGECGYRTAYKSALDRHMRT 292
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
+ F C CDY T N+ H + H G+K + C C Y K L H++
Sbjct: 293 HTGERPFRCDQCDYSTAQKSNLDCHRMRHTGEKPYMCGECGYRTADKSDLSRHMRTHMEG 352
Query: 141 KVK 143
K K
Sbjct: 353 KYK 355
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 20/113 (17%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCM-----------------VRP 80
+M P C C T+ NL L +H+ + P M +R
Sbjct: 37 HMRIHTGEKPYKCDLCDYSTAQKSNLDCHLAKHTGDKPYMCGECGYRTAFKSHLSQHMRR 96
Query: 81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
+ ++C C Y T ++ H H G+K FKC C + A QK L H
Sbjct: 97 HTGEKPYMCGECGYRTARKTDLLKHMRTHTGEKPFKCDKCDFSAAQKSTLDCH 149
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y T + H H G++ F+C C Y QK L H
Sbjct: 215 YMCGECGYRTAYKSALDRHMRTHTGERPFRCDQCDYSTAQKSNLDCH 261
>gi|189230150|ref|NP_001121399.1| uncharacterized protein LOC100158487 [Xenopus (Silurana)
tropicalis]
gi|158253524|gb|AAI54159.1| Zgc:174288 protein [Danio rerio]
gi|183986423|gb|AAI66099.1| LOC100158487 protein [Xenopus (Silurana) tropicalis]
Length = 302
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K FT + + HS + +R + F C C +S +++ H +IH G+++ +
Sbjct: 75 KPFTCTQCGMTFRHSSSLKVHMRIHTGENPFSCTHCGKSFRLSSSLKEHMMIHTGERKHR 134
Query: 117 CCLCSYGAYQKEKLQFHVKN 136
C CS ++ L+ H+K
Sbjct: 135 CDQCSRAFFRASTLKLHLKT 154
>gi|157676340|ref|NP_001099007.1| zinc finger protein 142 [Homo sapiens]
gi|313104298|sp|P52746.4|ZN142_HUMAN RecName: Full=Zinc finger protein 142; AltName: Full=HA4654
Length = 1687
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 428 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 479
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 480 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 510
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1452 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1500
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 187 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 242
>gi|449282372|gb|EMC89216.1| Zinc finger X-chromosomal protein, partial [Columba livia]
Length = 795
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
+LL HS+N P ICV C ++ H IH G+K ++C C Y +
Sbjct: 527 HLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRS 575
Query: 125 YQKEKLQFHVKNKHSTKV 142
L+ HVK KHS +
Sbjct: 576 ADSSNLKTHVKTKHSKET 593
>gi|443734812|gb|ELU18669.1| hypothetical protein CAPTEDRAFT_131120, partial [Capitella teleta]
Length = 55
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
F+C C+ ++ H IH G+K F C +C+Y + +K+ L HVK H
Sbjct: 1 FVCTICEKGFTAKTSLARHLRIHTGEKPFTCPVCAYASKKKDNLMRHVKAIH 52
>gi|222831662|ref|NP_001138541.1| zinc finger Y-chromosomal protein [Macaca mulatta]
gi|219880814|gb|ACL51680.1| zinc finger protein Y-linked [Macaca mulatta]
Length = 801
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 517 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 565
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 566 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 599
>gi|260781198|ref|XP_002585708.1| hypothetical protein BRAFLDRAFT_257729 [Branchiostoma floridae]
gi|229270741|gb|EEN41719.1| hypothetical protein BRAFLDRAFT_257729 [Branchiostoma floridae]
Length = 444
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+IC AC Y T N+ H +H G+K +KC C Y A K L+ H+
Sbjct: 125 YICEACGYKTANRSNLSAHLKMHTGEKPYKCDQCDYSAVWKLSLELHM 172
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH-VKNKHS 139
+++C C + T ++ H IH G+K ++C C Y AYQK ++ H KH+
Sbjct: 236 RYMCEECGHTTAHKAHLSRHMKIHTGEKPYRCDQCDYSAYQKGQVDRHKASGKHT 290
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P CK C F+++ L++H V+ K ++ C CDY T + +++ H H
Sbjct: 68 PYICKEC-GFSTAYKTSLVKH-------VKIHTRKKQYRCEHCDYSTNMKRDLHKHKSQH 119
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K + C C Y + L H+K
Sbjct: 120 TGEKLYICEACGYKTANRSNLSAHLK 145
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C+HC+ T+ +L + +H+ P ++C C + T + + H
Sbjct: 326 PYRCEHCEFQTAWKQSLETHMAQHTGEKP-----------YMCDKCGFRTAHTSHFSQHR 374
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+H G+K +KC LC Y + K + H+
Sbjct: 375 KLHTGEKPYKCGLCEYRSVWKSNVDIHM 402
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK-NKHST 140
++C C Y T + + H IH KQ++C C + QK +L H K +KH +
Sbjct: 7 YLCKECGYGTAYKKQLSRHVEIHTRKKQYRCEHCDFLTNQKRELDIHKKLDKHKS 61
>gi|208965720|dbj|BAG72874.1| zinc finger protein 142 [synthetic construct]
Length = 1687
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 428 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 479
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 480 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 510
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1452 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1500
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 187 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 242
>gi|427794203|gb|JAA62553.1| Putative zinc finger protein, partial [Rhipicephalus pulchellus]
Length = 251
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P SC HC S +L++ +R + +F CV CD ++ +H IH
Sbjct: 167 PFSCVHCNASFSIKRSLIVH--------IRTHTGERRFSCVHCDASFTRKSHLTDHVRIH 218
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G++ F C C+ +K+ L+ H+ +H K
Sbjct: 219 SGERPFSCVHCNASFARKQNLRDHILVRHGKK 250
>gi|380816300|gb|AFE80024.1| zinc finger X-chromosomal protein isoform 1 [Macaca mulatta]
Length = 803
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 519 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 567
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 568 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 601
>gi|242000396|ref|XP_002434841.1| zinc finger protein, putative [Ixodes scapularis]
gi|215498171|gb|EEC07665.1| zinc finger protein, putative [Ixodes scapularis]
Length = 245
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 35/84 (41%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P S + F D + + E RP P ++ C+ C Y + + N+ H H
Sbjct: 52 PASRPEGEGFDRGDSSSQPDCQELVRDGGRPHPEGREYQCLLCPYSSYLKTNLTRHEKTH 111
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFH 133
G+K FKC C QK ++ H
Sbjct: 112 TGEKPFKCSTCQQTFSQKAHVRHH 135
>gi|260815939|ref|XP_002602730.1| hypothetical protein BRAFLDRAFT_72909 [Branchiostoma floridae]
gi|229288041|gb|EEN58742.1| hypothetical protein BRAFLDRAFT_72909 [Branchiostoma floridae]
Length = 361
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++ NL + +R + F C CDY + +H LIH
Sbjct: 244 PYKCDQCGYSSTTKPNLALH--------IRTHTGEKPFKCDQCDYSAARKSTLDSHLLIH 295
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
G+K + C C Y Q+ L+ H++
Sbjct: 296 SGEKPYMCGECGYRTRQRNHLKQHLR 321
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++P K + C C Y T + N+ H + H G++ +KC C Y A K L H+
Sbjct: 12 IQPRNDKKLYSCRDCGYRTSLKYNLSRHMITHTGERPYKCNQCEYSASDKGNLDSHM 68
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++D + L+ H + K ++C C Y
Sbjct: 179 HMRTHTGEKPYKCDQC-DYSAADKSTLVSH-------LARHTGKKPYMCEKCGYRAARKS 230
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ H H+G+K +KC C Y + K L H++
Sbjct: 231 HFSKHMRTHMGEKPYKCDQCGYSSTTKPNLALHIR 265
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T +++ H H G+K +KC C Y A QK L H++
Sbjct: 301 YMCGECGYRTRQRNHLKQHLRTHTGEKPYKCDQCDYSAAQKCSLNSHLE 349
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Query: 52 SCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
SC+ C TS NL ++ H+ P + C C+Y N+ +H +
Sbjct: 22 SCRDCGYRTSLKYNLSRHMITHTGERP-----------YKCNQCEYSASDKGNLDSHMVR 70
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K + C C Y AY+K L H++
Sbjct: 71 HTGNKPYMCGECGYRAYRKFTLSQHMR 97
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T + H IH G+K +KC C++ + +K L H++
Sbjct: 133 YMCGECGYGTSKKDGLSRHMRIHTGEKPYKCEQCNFSSARKTHLLRHMR 181
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C+ +++SD L H MVR K ++C C Y + H H
Sbjct: 48 PYKCNQCE-YSASDKGNLDSH------MVRHTGNK-PYMCGECGYRAYRKFTLSQHMRTH 99
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C Y A K L H+
Sbjct: 100 TGEKPYKCDQCDYSAALKSSLDCHL 124
>gi|260787875|ref|XP_002588977.1| hypothetical protein BRAFLDRAFT_125440 [Branchiostoma floridae]
gi|229274149|gb|EEN44988.1| hypothetical protein BRAFLDRAFT_125440 [Branchiostoma floridae]
Length = 397
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F+C C Y T ++ H H GDK +KC C Y A +K L H++
Sbjct: 150 FMCGECGYRTAWKTHLSTHMRTHTGDKPYKCDQCDYSAAEKTNLSNHMR 198
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY N+ NH H G+K +KC C Y A +K L H+
Sbjct: 178 YKCDQCDYSAAEKTNLSNHMRTHTGEKPYKCVQCGYSASRKYSLVLHL 225
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ H H GDK +KC C Y A K L H+
Sbjct: 234 YMCGECGYRTTRKSDLSKHMRTHAGDKPYKCDQCDYSAAHKNSLNQHL 281
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T+ + H IH G+K +KC C Y A K L H+
Sbjct: 290 YMCGECGYRTVRKFDFSQHVRIHTGEKPYKCDQCDYSAAHKSTLNRHL 337
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ ++ H H DK FKC C + A QK L+ H+
Sbjct: 38 YMCGECGYRAVLKSDLVKHMRTHTSDKPFKCDQCDFSAAQKSNLKQHL 85
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
F C CD+ N++ H H GDK + C C Y A +K + H++
Sbjct: 66 FKCDQCDFSAAQKSNLKQHLSKHTGDKPYMCDECGYMADRKSTISRHMR 114
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T N+ H H G+K +KC C Y A K L H K
Sbjct: 346 YMCGECGYRTTKKCNLSQHMRTHTGEKPYKCDQCDYSAAVKFALNNHFK 394
>gi|402879200|ref|XP_003903236.1| PREDICTED: zinc finger protein ZFAT isoform 1 [Papio anubis]
Length = 1181
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 815 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 872
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 889 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 925
>gi|363732527|ref|XP_419998.3| PREDICTED: zinc finger protein 513 [Gallus gallus]
Length = 452
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY N++ H IH GDK F+C LCSY Q L+ H+
Sbjct: 347 YKCQLCDYACGNLANLKRHGRIHSGDKPFQCSLCSYSCNQSMNLKRHM 394
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 20/141 (14%)
Query: 6 QC-LLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCP-----------NMSFLNSVIPQSC 53
QC L + S ++CL C + CQ CP +M N P +C
Sbjct: 52 QCGLQLAASLGQSCLQCAGTEGGRNQRIVYTCQLCPFASHYSSHLKRHMKTHNGEKPFAC 111
Query: 54 KHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDK 113
C ++ VNL +R + + C C + N++ H +H DK
Sbjct: 112 PQCAYASAQLVNLTRH--------LRTHTGEKPYRCTGCSFACSSLGNLKRHERVHSQDK 163
Query: 114 QFKCCLCSYGAYQKEKLQFHV 134
F+C C Y Q L+ H+
Sbjct: 164 PFQCAACDYRCNQSRNLKRHM 184
>gi|326916622|ref|XP_003204605.1| PREDICTED: zinc finger protein 513-like [Meleagris gallopavo]
Length = 452
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY N++ H IH GDK F+C LCSY Q L+ H+
Sbjct: 347 YKCQLCDYACGNLANLKRHGRIHSGDKPFQCSLCSYSCNQSMNLKRHM 394
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 51/141 (36%), Gaps = 20/141 (14%)
Query: 6 QC-LLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCP-----------NMSFLNSVIPQSC 53
QC L + S + CL C + CQ CP +M N P +C
Sbjct: 52 QCGLQLAASLGQNCLQCAGTEGGRNQRIVYTCQLCPFASHYSSHLKRHMKTHNGEKPFAC 111
Query: 54 KHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDK 113
C ++ VNL +R + + C C + N++ H +H DK
Sbjct: 112 PQCAYASAQLVNLTRH--------LRTHTGEKPYRCTGCSFACSSLGNLKRHERVHSQDK 163
Query: 114 QFKCCLCSYGAYQKEKLQFHV 134
F+C C Y Q L+ H+
Sbjct: 164 PFQCAACDYRCNQSRNLKRHM 184
>gi|224042673|ref|XP_002195536.1| PREDICTED: zinc finger X-chromosomal protein [Taeniopygia guttata]
Length = 794
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
+LL HS+N P ICV C ++ H IH G+K ++C C Y +
Sbjct: 526 HLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRS 574
Query: 125 YQKEKLQFHVKNKHSTKV 142
L+ HVK KHS +
Sbjct: 575 ADSSNLKTHVKTKHSKET 592
>gi|118083994|ref|XP_416795.2| PREDICTED: zinc finger X-chromosomal protein [Gallus gallus]
Length = 794
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
+LL HS+N P ICV C ++ H IH G+K ++C C Y +
Sbjct: 526 HLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRS 574
Query: 125 YQKEKLQFHVKNKHSTKV 142
L+ HVK KHS +
Sbjct: 575 ADSSNLKTHVKTKHSKET 592
>gi|58865628|ref|NP_001012030.1| zinc finger protein 281 [Rattus norvegicus]
gi|53733788|gb|AAH83844.1| Zinc finger protein 281 [Rattus norvegicus]
Length = 889
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 249 PSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 302
>gi|380816304|gb|AFE80026.1| zinc finger Y-chromosomal protein isoform 1 [Macaca mulatta]
Length = 804
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 520 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 568
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 569 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 602
>gi|380816302|gb|AFE80025.1| zinc finger Y-chromosomal protein isoform 1 [Macaca mulatta]
Length = 804
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 520 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 568
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 569 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 602
>gi|260791894|ref|XP_002590962.1| hypothetical protein BRAFLDRAFT_106952 [Branchiostoma floridae]
gi|229276162|gb|EEN46973.1| hypothetical protein BRAFLDRAFT_106952 [Branchiostoma floridae]
Length = 378
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY ++R H H GDK +KC C Y A K L H++
Sbjct: 28 YKCDQCDYSAAQRSSLRQHKSKHTGDKPYKCNECGYRAAHKSTLTTHIRT 77
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
+ CV C Y + N+ H H G+K FKC C Y A K L H+ +H++
Sbjct: 168 YKCVECSYTSATRSNLSRHMRKHTGEKPFKCDQCDYSAAVKFALDKHILARHNS 221
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY 122
D ++L H+ N +P F+C C Y + ++ H H G++ +KC LCSY
Sbjct: 212 DKHILARHNSN---HEKP------FMCGECGYRSDQKCHLLQHLKTHTGERPYKCDLCSY 262
Query: 123 GAYQKEKLQFHVKN 136
A QK L H++
Sbjct: 263 SAAQKSTLSQHLRT 276
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+ C CDY ++ H H GDK F C +C Y QK +L H++ H+ K K
Sbjct: 311 YKCDQCDYSGARKCSLDKHKATHTGDKPFMCEVCGYRTAQKTRLTQHMRT-HTKKKK 366
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T N+ H H G+K FKC C + +K L HV
Sbjct: 112 YMCGECGYRTTRMFNLSAHMRTHSGEKPFKCDWCEFSTARKSNLDVHV 159
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+C C Y T ++ H +H G+K +KC C Y A Q+ L+ H K+KH+
Sbjct: 1 MCDECGYRTDKRSDLVVHMRVHTGEKPYKCDQCDYSAAQRSSLRQH-KSKHT 51
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 73 NCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQF 132
N +R + F C C++ T N+ H H G K +KC CSY + + L
Sbjct: 126 NLSAHMRTHSGEKPFKCDWCEFSTARKSNLDVHVTTHTGKKPYKCVECSYTSATRSNLSR 185
Query: 133 HVK 135
H++
Sbjct: 186 HMR 188
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C Y + H H G++ +KC C Y A K L H+K KH+ K
Sbjct: 56 YKCNECGYRAAHKSTLTTHIRTHTGERPYKCDQCDYSAITKSTLDLHLK-KHAGK 109
>gi|157954516|ref|NP_001103333.1| uncharacterized protein LOC100126137 [Danio rerio]
gi|157423049|gb|AAI53554.1| Zgc:174288 protein [Danio rerio]
Length = 302
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K FT + + HS + +R + F C C +S +++ H +IH G+++ +
Sbjct: 75 KPFTCTQCGMTFRHSSSLKVHMRIHTGENPFSCTHCGKSFRLSSSLKEHMMIHTGERKHR 134
Query: 117 CCLCSYGAYQKEKLQFHVKN 136
C CS ++ L+ H+K
Sbjct: 135 CDQCSRAFFRASTLKLHLKT 154
>gi|18377589|gb|AAL67136.1| zinc finger protein ZFX isoform 4 [Homo sapiens]
Length = 492
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 208 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 256
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 257 HTGEKPYQCQYCEYRSADPSNLKTHVKTKHSKEM 290
>gi|38348526|ref|NP_941046.1| zinc finger protein ZFAT isoform 2 [Mus musculus]
gi|32172725|gb|AAH53930.1| Zinc finger and AT hook domain containing [Mus musculus]
Length = 1219
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 865 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 922
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+++H L+H D KQFKC +C Y A QK +L H++ S K
Sbjct: 939 TLKSHKLLHTSDGKQFKCTVCDYTAAQKPQLLRHMEQHASFK 980
>gi|395840116|ref|XP_003792911.1| PREDICTED: zinc finger protein ZFAT isoform 2 [Otolemur garnettii]
Length = 1155
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 865 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCTLCEYATRSKSNLKAHM-NRHSTE 922
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 939 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 975
>gi|357613515|gb|EHJ68557.1| hypothetical protein KGM_03879 [Danaus plexippus]
Length = 367
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 67 LMEHSENCPCMVRPD------PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC 120
L+E PC D VK + IC C T ++M++H L+H G+++FKC C
Sbjct: 179 LLEGYRVIPCRKIKDHKDKKSAVKREDICPYCGKKT---RSMKSHILVHAGERKFKCNGC 235
Query: 121 SYGAYQKEKLQFHVKN 136
G Y K L+ H+K+
Sbjct: 236 KRGFYSKHTLKQHIKS 251
>gi|9623236|gb|AAF90072.1| zinc finger protein Zfx [Profelis aurata]
Length = 393
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|380816296|gb|AFE80022.1| zinc finger Y-chromosomal protein isoform 1 [Macaca mulatta]
gi|380816306|gb|AFE80027.1| zinc finger Y-chromosomal protein isoform 1 [Macaca mulatta]
Length = 804
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 520 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 568
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 569 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 602
>gi|332246544|ref|XP_003272413.1| PREDICTED: zinc finger protein 142 [Nomascus leucogenys]
Length = 1686
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 428 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 479
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 480 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 510
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1451 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1499
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 187 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 242
>gi|326924960|ref|XP_003208690.1| PREDICTED: zinc finger protein 281-like [Meleagris gallopavo]
Length = 694
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCM-------VRPDPVKYKFICVACDYFTIISQNMRNH 105
+H +N +S +L + S + P + P + +C C S ++R H
Sbjct: 18 SEHGRNLITSFHTVLAKRSLHLPDIWGVQHRGAVASPSQKPHVCEHCSAAFRSSYHLRRH 77
Query: 106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
LIH G++ F+C CS G QK LQ H K
Sbjct: 78 VLIHTGERPFQCSQCSMGFIQKYLLQRHEK 107
>gi|219880775|gb|ACL51661.1| zinc finger protein Y-linked [Callithrix jacchus]
Length = 799
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 515 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 563
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 564 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 597
>gi|260823006|ref|XP_002603974.1| hypothetical protein BRAFLDRAFT_71738 [Branchiostoma floridae]
gi|229289299|gb|EEN59985.1| hypothetical protein BRAFLDRAFT_71738 [Branchiostoma floridae]
Length = 182
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++D + L +H V + ++C C Y T ++ H IH
Sbjct: 27 PYKCDQC-DYSAADKSTLEQH-------VAKHNGEKPYMCGECGYRTAYRSHLSRHIRIH 78
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
G++ +KC C Y A +K + H+ ++HS K
Sbjct: 79 TGERPYKCDQCGYSAARKYSIDQHL-SRHSCK 109
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+C C Y T ++ HT H G++ +KC C Y A K L+ HV + K
Sbjct: 1 MCGECGYRTDKKSHLSRHTRTHTGERPYKCDQCDYSAADKSTLEQHVAKHNGEK 54
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++ C Y ++R H IH G+K +KC C Y A K L+ HV
Sbjct: 112 YMSGKCGYKADQKSDLRKHMRIHTGEKPYKCDHCDYSAAHKSNLEQHV 159
>gi|397519977|ref|XP_003830125.1| PREDICTED: zinc finger protein ZFAT isoform 4 [Pan paniscus]
Length = 1181
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 815 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 872
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 889 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 925
>gi|328715760|ref|XP_001948978.2| PREDICTED: zinc finger protein 502-like [Acyrthosiphon pisum]
Length = 372
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA 124
N L+ + + VR + +C C +S+ + H IH G++ FKC LCS G
Sbjct: 253 NKLLSSAHHLKLHVRIHTGEKNHVCEMCGKAFTVSKYLVEHKRIHTGERPFKCDLCSKGF 312
Query: 125 YQKEKLQFHVK 135
QK L+ H +
Sbjct: 313 TQKTSLRIHTR 323
>gi|444717056|gb|ELW57892.1| Zinc finger protein 281 [Tupaia chinensis]
Length = 704
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 159 PSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 212
>gi|403284782|ref|XP_003933734.1| PREDICTED: zinc finger protein ZFAT isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1270
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 904 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 961
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 978 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 1014
>gi|444716263|gb|ELW57116.1| Zinc finger protein ZFAT [Tupaia chinensis]
Length = 1150
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 825 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 882
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Query: 46 NSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH 105
V P C C+ T S NL + + + +C C +++H
Sbjct: 852 EGVKPFKCSLCEYATRSKSNLKAHMNRHS--------TEKTHLCDMCGKKFKSKGTLKSH 903
Query: 106 TLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
L+H D KQFKC +C Y A QK +L H++ S K
Sbjct: 904 KLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQHASFK 940
>gi|45504124|dbj|BAD12568.1| ZFAT-2 [Homo sapiens]
gi|45504126|dbj|BAD12569.1| ZFAT-3 [Homo sapiens]
Length = 1231
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 865 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 922
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 939 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 975
>gi|397519973|ref|XP_003830123.1| PREDICTED: zinc finger protein ZFAT isoform 2 [Pan paniscus]
Length = 1243
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 877 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 934
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 951 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 987
>gi|162138984|ref|NP_001104697.1| zinc finger protein 502-like [Danio rerio]
gi|158254069|gb|AAI54259.1| Zgc:174234 protein [Danio rerio]
Length = 294
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 50 PQSCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
P C HC K F SD LL +H E +P +IC CD N+R H I
Sbjct: 205 PYKCSHCDKRF--SDSGLLRQH-ERVHTGEKP------YICSYCDKRFSGGGNLRQHVRI 255
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K +KC C Q L+ H +
Sbjct: 256 HTGEKPYKCSYCDKRFRQLGGLKIHER 282
>gi|449680295|ref|XP_002165356.2| PREDICTED: zinc finger protein 624-like [Hydra magnipapillata]
Length = 590
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 18/105 (17%)
Query: 36 CQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFI-----CV 90
C+ + N P CK+C NF S+ L HS +Y ++ C
Sbjct: 383 CREAGQLQTQNCEKPFKCKYC-NFESAYEMDLKRHS------------RYHYLVKLLKCT 429
Query: 91 ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
CDY + N R H H G+K FKC Y QK L H++
Sbjct: 430 YCDYICKAANNFRLHMRTHTGEKPFKCSYWEYKCAQKSNLTVHLR 474
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 79 RPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
R ++ F C CDY I ++ H H DK FKC +C+Y + K L+ H K
Sbjct: 530 RKHTLEKPFHCTICDYKCSIKGYLKIHERTHANDKPFKCTVCNYSSNVKSNLKKHSK 586
>gi|81674613|gb|AAI09518.1| PLAGL2 protein [Bos taurus]
Length = 366
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 52 SCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
SCK C + F S+ L+EH + V + K C CD +++R H ++H
Sbjct: 157 SCKVCLQTFESTQA--LLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHT 214
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G K F C C+ +K+ L HVK HS ++
Sbjct: 215 GRKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 246
>gi|397519971|ref|XP_003830122.1| PREDICTED: zinc finger protein ZFAT isoform 1 [Pan paniscus]
gi|397519975|ref|XP_003830124.1| PREDICTED: zinc finger protein ZFAT isoform 3 [Pan paniscus]
gi|397519979|ref|XP_003830126.1| PREDICTED: zinc finger protein ZFAT isoform 5 [Pan paniscus]
Length = 1231
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 865 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 922
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 939 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 975
>gi|380816298|gb|AFE80023.1| zinc finger X-chromosomal protein isoform 1 [Macaca mulatta]
Length = 803
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 519 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 567
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ H+K KHS ++
Sbjct: 568 HTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEM 601
>gi|71059729|emb|CAJ18408.1| Zfp281 [Mus musculus]
Length = 893
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 253 PSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 306
>gi|326421474|gb|ADZ73765.1| pleiomorphic adenoma protein-like 2 [Platanista gangetica]
Length = 238
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 52 SCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
SCK C + F S+ L+EH + V + K C CD +++R H ++H
Sbjct: 43 SCKVCLQTFESTQA--LLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHT 100
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G K F C C+ +K+ L HVK HS ++
Sbjct: 101 GRKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 132
>gi|297669431|ref|XP_002812897.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 142 [Pongo
abelii]
Length = 1667
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C +FT DV+ L +H M+ K ++C C Y T +R H H
Sbjct: 428 PHKCELC-DFTCRDVSYLSKH------MLTHSNTK-DYMCTECGYVTKWKHYLRVHMRKH 479
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
GD +++C CSY ++ ++L H K +H K
Sbjct: 480 AGDLRYQCNQCSYRCHRADQLSSH-KLRHQGK 510
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T Q + H+ IH G+K + C LC Y +L++H++
Sbjct: 1432 YKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR 1480
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
PDP C C F ++ H L LG+K C LC Y A ++ L H+ + H
Sbjct: 187 PDP---SLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMH 242
>gi|291242666|ref|XP_002741229.1| PREDICTED: zinc finger-like protein-like [Saccoglossus kowalevskii]
Length = 803
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK 137
+R ++ F+C C S +++ H L H G + ++C LC K+ LQFH+K
Sbjct: 479 LRAHKGEFPFVCDKCSKGFFDSHSLKVHLLTHSGVRPYRCTLCDSSTTTKQLLQFHMKKA 538
Query: 138 HS 139
H
Sbjct: 539 HG 540
>gi|427793727|gb|JAA62315.1| Putative zinc finger protein, partial [Rhipicephalus pulchellus]
Length = 450
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
+ C+ C+ ++R H +HLG +++C CSY +Y + + HV+ H+ D
Sbjct: 343 RLACLRCERLFSSFSSLRRHAAVHLGYSRYQCTRCSYQSYNRADCRSHVQRVHADAAHD 401
>gi|9623214|gb|AAF90061.1| zinc finger protein Zfx [Lynx lynx]
Length = 393
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|410296910|gb|JAA27055.1| zinc finger and AT hook domain containing [Pan troglodytes]
Length = 1243
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 877 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 934
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 951 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 987
>gi|410218770|gb|JAA06604.1| zinc finger and AT hook domain containing [Pan troglodytes]
gi|410353353|gb|JAA43280.1| zinc finger and AT hook domain containing [Pan troglodytes]
Length = 1243
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 877 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 934
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 951 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 987
>gi|403284788|ref|XP_003933737.1| PREDICTED: zinc finger protein ZFAT isoform 4 [Saimiri boliviensis
boliviensis]
Length = 1184
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 904 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 961
>gi|403284786|ref|XP_003933736.1| PREDICTED: zinc finger protein ZFAT isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1181
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 815 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 872
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 889 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 925
>gi|403284784|ref|XP_003933735.1| PREDICTED: zinc finger protein ZFAT isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1243
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 877 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 934
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 951 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 987
>gi|397519981|ref|XP_003830127.1| PREDICTED: zinc finger protein ZFAT isoform 6 [Pan paniscus]
Length = 1145
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 865 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 922
>gi|426360783|ref|XP_004047612.1| PREDICTED: zinc finger protein ZFAT [Gorilla gorilla gorilla]
Length = 1271
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 919 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 976
>gi|344283556|ref|XP_003413537.1| PREDICTED: zinc finger and BTB domain-containing protein 48
[Loxodonta africana]
Length = 688
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C NLL + NC M R + V F C C +R H + H
Sbjct: 318 PFECPKCGKCYFRKENLLEHEARNC--MTRSEQV---FTCSVCQETFRRRMELRVHMVSH 372
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
G+ +KC CS QK+ LQ H+ H
Sbjct: 373 TGEMPYKCSSCSQQFMQKKDLQSHMIKLH 401
>gi|260823084|ref|XP_002604013.1| hypothetical protein BRAFLDRAFT_71698 [Branchiostoma floridae]
gi|229289338|gb|EEN60024.1| hypothetical protein BRAFLDRAFT_71698 [Branchiostoma floridae]
Length = 472
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F+C C Y + ++ H H G+K FKC C Y A QK + H+ KHS
Sbjct: 238 FMCGECGYRSAHKCHLSEHMKTHTGEKPFKCDQCDYSAAQKTHMDRHIVAKHS 290
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 60 TSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL 119
T D +++ +HS+ P +IC C Y T ++ H IH G+K +KC
Sbjct: 279 THMDRHIVAKHSDEKP-----------YICGECGYRTTQKAHLSQHMRIHTGEKPYKCDQ 327
Query: 120 CSYGAYQKEKLQFHV 134
C Y K L H+
Sbjct: 328 CDYTVAHKSSLNDHM 342
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
++C C Y T N+ H IH +K +KC C+Y A ++ KL H+ KV
Sbjct: 113 YMCEVCGYRTAQKFNLSRHMRIHTEEKPYKCDQCNYSASERSKLDKHLAKHTGKKV 168
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
+C C Y ++ H H G+K FKC C + A QK L H KH+
Sbjct: 1 MCGECGYRAAQKHHLSRHMRTHTGEKPFKCDQCDFSAAQKSSLDNHTVAKHT 52
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C C Y T N+ H H G+K +KC C Y A QK L H++
Sbjct: 351 YKCGECGYKTAKKANLFRHMRTHTGEKPYKCDQCDYSAAQKCALDQHMR 399
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
++C C Y T ++ H IH G+K F C C Y + K L H+K
Sbjct: 210 YLCGECGYRTAKKDHLTEHLKIHTGEKPFMCGECGYRSAHKCHLSEHMK 258
>gi|17933059|gb|AAL48189.1| Y-linked zinc finger protein [Bos taurus]
Length = 208
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|9623286|gb|AAF90097.1| zinc finger protein Zfy [Panthera tigris]
Length = 392
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 108 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 156
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 157 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 190
>gi|9623278|gb|AAF90093.1| zinc finger protein Zfy [Neofelis nebulosa]
gi|9623284|gb|AAF90096.1| zinc finger protein Zfy [Panthera pardus]
gi|9623292|gb|AAF90100.1| zinc finger protein Zfy [Felis chaus]
gi|9623294|gb|AAF90101.1| zinc finger protein Zfy [Felis catus]
gi|9623300|gb|AAF90104.1| zinc finger protein Zfy [Herpailurus yaguarondi]
Length = 392
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 108 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 156
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 157 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 190
>gi|9623208|gb|AAF90058.1| zinc finger protein Zfx [Leopardus tigrinus]
Length = 393
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------XICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|9623212|gb|AAF90060.1| zinc finger protein Zfx [Leopardus geoffroyi]
Length = 393
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|9623220|gb|AAF90064.1| zinc finger protein Zfx [Prionailurus bengalensis]
Length = 389
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|45504122|dbj|BAD12567.1| ZFAT-1 [Homo sapiens]
Length = 1243
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 877 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 934
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 951 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 987
>gi|161598425|gb|ABX74956.1| ZFX [Diceros bicornis michaeli]
Length = 201
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 51 QSCKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
CK C+ T+ + +LL HS+N P ICV C ++ H
Sbjct: 100 HKCKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHM 148
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
IH G+K ++C C Y + L+ HVK KHS ++
Sbjct: 149 RIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 184
>gi|26325460|dbj|BAC26484.1| unnamed protein product [Mus musculus]
Length = 742
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 458 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFCHPSELKKHMRI 506
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 507 HTGEKPYECQYCEYRSTDSSNLKTHVKTKHSKEM 540
>gi|141626|sp|P23607.1|ZFA_MOUSE RecName: Full=Zinc finger autosomal protein
gi|55469|emb|CAA37338.1| Zfa [Mus musculus]
gi|151556692|gb|AAI48595.1| Zinc finger protein, autosomal [synthetic construct]
gi|157170124|gb|AAI53159.1| Zinc finger protein, autosomal [synthetic construct]
Length = 742
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 458 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFCHPSELKKHMRI 506
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 507 HTGEKPYECQYCEYRSTDSSNLKTHVKTKHSKEM 540
>gi|9623228|gb|AAF90068.1| zinc finger protein Zfx [Panthera onca]
Length = 393
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|46487911|ref|NP_065914.2| zinc finger protein ZFAT isoform 1 [Homo sapiens]
gi|85681862|sp|Q9P243.2|ZFAT_HUMAN RecName: Full=Zinc finger protein ZFAT; AltName: Full=Zinc finger
gene in AITD susceptibility region; AltName: Full=Zinc
finger protein 406
gi|75516788|gb|AAI01767.1| Zinc finger and AT hook domain containing [Homo sapiens]
gi|75516790|gb|AAI01769.1| Zinc finger and AT hook domain containing [Homo sapiens]
Length = 1243
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 84 KYKFICVACD-YFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
K C CD YF +++ H H G K FKC LC Y K L+ H+ N+HST+
Sbjct: 877 KRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHM-NRHSTE 934
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 101 NMRNHTLIHLGD-KQFKCCLCSYGAYQKEKLQFHVKN 136
+++H L+H D KQFKC +C Y A QK +L H++
Sbjct: 951 TLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQ 987
>gi|397505089|ref|XP_003823107.1| PREDICTED: zinc finger protein 281 [Pan paniscus]
Length = 896
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 257 PSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 310
>gi|326680713|ref|XP_691749.5| PREDICTED: zinc finger Y-chromosomal protein 1-like [Danio rerio]
Length = 725
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 51 QSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
CK C ++ +++ LL H ++ + ICV C ++ H H
Sbjct: 436 HKCKFC-DYETAEQGLLNRH------LLAVHSKSFPHICVECGKGFRHPSELKKHMRTHT 488
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K + C C Y + L+ HVK KHS ++
Sbjct: 489 GEKPYSCMYCDYKSADSSNLKTHVKTKHSREL 520
>gi|222708635|gb|ACM67119.1| zinc finger protein ZFX/ZFX [Elephas maximus indicus]
Length = 120
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 26 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 74
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 75 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 108
>gi|194672710|ref|XP_001255070.2| PREDICTED: zinc finger protein 64 homolog, isoforms 3 and 4 [Bos
taurus]
gi|297482129|ref|XP_002692551.1| PREDICTED: zinc finger protein 64 homolog, isoforms 3 and 4 [Bos
taurus]
gi|296480978|tpg|DAA23093.1| TPA: zinc finger protein 64 homolog-like [Bos taurus]
Length = 109
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C S NL M C V+P C CDY + S +++ H IH
Sbjct: 16 PHKCEFCDKCFSRKDNLTMH--MRCHTSVKP------HKCHLCDYAAVDSSSLKKHLRIH 67
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ +KC LC Y + +L H+++
Sbjct: 68 SDERPYKCQLCPYASRNSSQLTVHLRS 94
>gi|17530011|gb|AAL40669.1| zinc finger protein ZFY [Elephas maximus]
Length = 116
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 28 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 76
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 77 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 110
>gi|9623204|gb|AAF90056.1| zinc finger protein Zfx [Leopardus colocolo]
Length = 393
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|118344058|ref|NP_001071855.1| zinc finger protein [Ciona intestinalis]
gi|70571536|dbj|BAE06768.1| zinc finger protein [Ciona intestinalis]
Length = 750
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 32 FIGHCQTCPNMSFLNSVIPQS------CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKY 85
+ H +TCP + + P C C S+ NL E V+P
Sbjct: 429 MVAHERTCPGVDESGKMNPTKNEEKFVCSVCSKQLSNKRNL--EKHFEIHLDVKP----- 481
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F+C C + T + +++ H +H G+K FKC +C+Y K L+ H K +HS +
Sbjct: 482 -FVCDLCGHSTRLKESLIMHKRLHTGEKPFKCDICNYATPDKSSLRRH-KRRHSNE 535
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
F C C+Y T ++R H H +K +KC C Y QK L+ H++ KH+
Sbjct: 510 FKCDICNYATPDKSSLRRHKRRHSNEKPYKCSYCGYKCIQKHCLENHIRRKHT 562
>gi|426333176|ref|XP_004028160.1| PREDICTED: zinc finger protein 281 [Gorilla gorilla gorilla]
Length = 893
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 254 PSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 307
>gi|74178628|dbj|BAE33992.1| unnamed protein product [Mus musculus]
Length = 893
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 253 PSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 306
>gi|29244048|ref|NP_808311.1| zinc finger protein 281 [Mus musculus]
gi|237681154|ref|NP_001153723.1| zinc finger protein 281 [Mus musculus]
gi|81916620|sp|Q99LI5.1|ZN281_MOUSE RecName: Full=Zinc finger protein 281
gi|13096885|gb|AAH03243.1| Zinc finger protein 281 [Mus musculus]
gi|38328343|gb|AAH62153.1| Zinc finger protein 281 [Mus musculus]
gi|74209201|dbj|BAE24981.1| unnamed protein product [Mus musculus]
Length = 893
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 253 PSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 306
>gi|297499793|gb|ADI44084.1| zinc finger protein ZFX, partial [Macaca maura]
gi|297499795|gb|ADI44085.1| zinc finger protein ZFX, partial [Macaca hecki]
gi|297499797|gb|ADI44086.1| zinc finger protein ZFX, partial [Macaca tonkeana]
gi|297499799|gb|ADI44087.1| zinc finger protein ZFX, partial [Macaca tonkeana]
gi|297499801|gb|ADI44088.1| zinc finger protein ZFX, partial [Macaca tonkeana]
gi|297499803|gb|ADI44089.1| zinc finger protein ZFX, partial [Macaca tonkeana]
gi|297499805|gb|ADI44090.1| zinc finger protein ZFX, partial [Macaca hecki]
gi|297499807|gb|ADI44091.1| zinc finger protein ZFX, partial [Macaca ochreata]
gi|297499809|gb|ADI44092.1| zinc finger protein ZFX, partial [Macaca nigrescens]
gi|297499811|gb|ADI44093.1| zinc finger protein ZFX, partial [Macaca nigra]
gi|297499813|gb|ADI44094.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499815|gb|ADI44095.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499817|gb|ADI44096.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499819|gb|ADI44097.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499821|gb|ADI44098.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499823|gb|ADI44099.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499825|gb|ADI44100.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499827|gb|ADI44101.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499829|gb|ADI44102.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499831|gb|ADI44103.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499833|gb|ADI44104.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499835|gb|ADI44105.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499837|gb|ADI44106.1| zinc finger protein ZFX, partial [Macaca nemestrina]
gi|297499839|gb|ADI44107.1| zinc finger protein ZFX, partial [Macaca fascicularis]
Length = 264
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|260804231|ref|XP_002596992.1| hypothetical protein BRAFLDRAFT_58403 [Branchiostoma floridae]
gi|229282253|gb|EEN53004.1| hypothetical protein BRAFLDRAFT_58403 [Branchiostoma floridae]
Length = 458
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T+ ++ +H IH G+K +KC C Y A +K L +H+
Sbjct: 104 YMCGECGYRTVQKSHLFDHMRIHTGEKPYKCDQCDYSASKKSILDYHL 151
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDYF ++ H H G+K + C C Y A QK L H++
Sbjct: 321 FKCEQCDYFAARKYHLDRHLAKHTGEKSYMCEECGYRAAQKSHLSRHMRT 370
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T ++ +H H G+K +KC C Y A +K + +H+
Sbjct: 181 YMCGECGYRTAKKSHLSDHMRTHTGEKPYKCDQCDYSAAKKSHVDYHL 228
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C + ++ + L EH +R + + C CDY N+ H H
Sbjct: 47 PYMCGEC-GYRTTQKSDLSEH-------MRTHTGRKSYKCNQCDYSAAHKYNLGRHLAKH 98
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK 135
GDK + C C Y QK L H++
Sbjct: 99 TGDKPYMCGECGYRTVQKSHLFDHMR 124
>gi|9623282|gb|AAF90095.1| zinc finger protein Zfy [Panthera onca]
Length = 392
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 108 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 156
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 157 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 190
>gi|9623242|gb|AAF90075.1| zinc finger protein Zfx [Puma concolor]
Length = 393
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|410219202|gb|JAA06820.1| zinc finger protein 281 [Pan troglodytes]
gi|410249860|gb|JAA12897.1| zinc finger protein 281 [Pan troglodytes]
gi|410352569|gb|JAA42888.1| zinc finger protein 281 [Pan troglodytes]
Length = 896
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 257 PSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 310
>gi|222708633|gb|ACM67118.1| zinc finger protein ZFX/ZFY [Elephas maximus indicus]
Length = 120
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 26 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 74
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 75 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 108
>gi|260823056|ref|XP_002603999.1| hypothetical protein BRAFLDRAFT_71712 [Branchiostoma floridae]
gi|229289324|gb|EEN60010.1| hypothetical protein BRAFLDRAFT_71712 [Branchiostoma floridae]
Length = 260
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 14/84 (16%)
Query: 54 KHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
KH +T+ NL L +H+ P ++C C + + H IH
Sbjct: 96 KHVVEYTAQKSNLDQHLEKHTGEKP-----------YMCGECGFRATFKSTLSTHMRIHT 144
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHV 134
G+K +KC C Y A QK L H+
Sbjct: 145 GEKPYKCDQCDYSAAQKSTLDIHL 168
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
+ C CDY +++ +H H G+K + C C Y A Q+ L H+K K+
Sbjct: 205 YKCDQCDYSAAQKRHLIDHQTRHTGEKPYMCGECGYRAAQRSSLSRHMKTHTGGKL 260
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL 130
++C C Y T ++ H H G+K +KC C Y A QK L
Sbjct: 177 YMCGECGYRTANRSHLSKHMRTHTGEKPYKCDQCDYSAAQKRHL 220
>gi|9623206|gb|AAF90057.1| zinc finger protein Zfx [Leopardus pardalis]
gi|9623210|gb|AAF90059.1| zinc finger protein Zfx [Leopardus wiedii]
gi|9623216|gb|AAF90062.1| zinc finger protein Zfx [Lynx rufus]
gi|9623226|gb|AAF90067.1| zinc finger protein Zfx [Panthera leo]
gi|9623230|gb|AAF90069.1| zinc finger protein Zfx [Panthera pardus]
gi|9623232|gb|AAF90070.1| zinc finger protein Zfx [Panthera tigris]
gi|9623234|gb|AAF90071.1| zinc finger protein Zfx [Catopuma temminckii]
gi|9623238|gb|AAF90073.1| zinc finger protein Zfx [Acinonyx jubatus]
gi|9623240|gb|AAF90074.1| zinc finger protein Zfx [Herpailurus yaguarondi]
gi|9623244|gb|AAF90076.1| zinc finger protein Zfx [Felis catus]
gi|9623246|gb|AAF90077.1| zinc finger protein Zfx [Felis chaus]
gi|9623248|gb|AAF90078.1| zinc finger protein Zfx [Felis silvestris]
gi|9623252|gb|AAF90080.1| zinc finger protein Zfx [Leptailurus serval]
gi|9623254|gb|AAF90081.1| zinc finger protein Zfx [Otocolobus manul]
gi|9623256|gb|AAF90082.1| zinc finger protein Zfy [Otocolobus manul]
Length = 393
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|9623260|gb|AAF90084.1| zinc finger protein Zfy [Leopardus pardalis]
gi|9623266|gb|AAF90087.1| zinc finger protein Zfy [Leopardus geoffroyi]
Length = 392
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 108 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 156
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 157 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 190
>gi|260813262|ref|XP_002601337.1| hypothetical protein BRAFLDRAFT_82753 [Branchiostoma floridae]
gi|229286632|gb|EEN57349.1| hypothetical protein BRAFLDRAFT_82753 [Branchiostoma floridae]
Length = 353
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+C C Y T +N+ H H G++ +KC C Y A QK L H+
Sbjct: 302 IMCGECGYRTADRRNLHRHMRTHTGERPYKCDQCDYSAAQKSTLNHHL 349
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
+ C CDY ++ H L H GDK + C C Y A QK L H+K
Sbjct: 217 YKCDQCDYSAAQKSSLDIHLLKHTGDKPYMCWECGYRATQKGDLSRHMK 265
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y ++ H H G+K +KC C Y A QK L H+ TK
Sbjct: 245 YMCWECGYRATQKGDLSRHMKKHTGEKPYKCDQCDYSAAQKSTLDSHLATHSGTK 299
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y ++ H H G+K +KC C Y A QK L H+
Sbjct: 189 YMCGECGYRATQKCDLSRHMKKHTGEKPYKCDQCDYSAAQKSSLDIHL 236
>gi|194903706|ref|XP_001980922.1| GG17430 [Drosophila erecta]
gi|190652625|gb|EDV49880.1| GG17430 [Drosophila erecta]
Length = 347
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+HC + SD + ++H E RP F+C C+ S ++NH L+H
Sbjct: 250 PFKCRHCSR-SFSDYSTRLKH-ERTHTNERP------FVCKECNNAFTTSYILKNHMLVH 301
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVK-NKHSTKV 142
G+K F+C LC + L H + N H K
Sbjct: 302 TGEKAFRCDLCDKSFSRDTHLNTHYRSNAHRRKA 335
>gi|166796199|gb|AAI59086.1| zfp64 protein [Xenopus (Silurana) tropicalis]
gi|171847146|gb|AAI61587.1| Unknown (protein for IMAGE:7601694) [Xenopus (Silurana) tropicalis]
Length = 420
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
F C+ C+ I+ +++ H +H G+K F+C C++ K L+ H++ KH+T+
Sbjct: 249 FQCILCNAKFKINSDLKRHMRVHTGEKPFRCDFCNFVCAMKGNLKSHIRMKHNTET 304
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 76 CMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C + PVK C C Y ++ H IH D+ FKC C + Q+ L H+K
Sbjct: 327 CHLPEQPVK----CADCSYSCSSKAALKVHERIHSKDRPFKCSFCQFDTKQRSNLTTHIK 382
Query: 136 NKHSTKVK 143
H +VK
Sbjct: 383 KCHGDQVK 390
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY S ++ H IH ++ FKC +C Y + +L H+++
Sbjct: 193 FKCKECDYRAADSSSLCKHQRIHTNERPFKCQICPYASRNSSQLTVHLRS 242
>gi|90080818|dbj|BAE89890.1| unnamed protein product [Macaca fascicularis]
Length = 362
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 52 SCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
SCK C + F S+ L+EH + V + K C CD +++R H ++H
Sbjct: 157 SCKVCLQTFESTQA--LLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHT 214
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G K F C C+ +K+ L HVK HS ++
Sbjct: 215 GRKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 246
>gi|431894525|gb|ELK04325.1| Transcriptional repressor CTCFL [Pteropus alecto]
Length = 367
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C C Y ++ + ++ H H G++ F+C LCSY + KL+ H++
Sbjct: 67 FKCSMCKYASVEASKLKRHIRSHTGERPFQCRLCSYASKDTYKLKRHMRT 116
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 27/55 (49%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
KF C C Y ++M HT H G+K F C CS QK+ L HVK H T
Sbjct: 210 KFQCEHCSYACKQERHMTAHTRTHTGEKPFICHFCSKCFRQKQLLNVHVKKCHET 264
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C CK + S + + L H +R + F C C Y + + ++ H H
Sbjct: 66 PFKCSMCK-YASVEASKLKRH-------IRSHTGERPFQCRLCSYASKDTYKLKRHMRTH 117
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G+K ++C +C Q ++ H+ KHS V
Sbjct: 118 SGEKPYECHVCHARFTQSGTMKIHILQKHSENV 150
>gi|9623270|gb|AAF90089.1| zinc finger protein Zfy [Lynx rufus]
gi|9623272|gb|AAF90090.1| zinc finger protein Zfy [Prionailurus planiceps]
gi|9623296|gb|AAF90102.1| zinc finger protein Zfy [Felis silvestris]
gi|9623298|gb|AAF90103.1| zinc finger protein Zfy [Acinonyx jubatus]
Length = 392
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 108 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 156
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 157 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 190
>gi|9623250|gb|AAF90079.1| zinc finger protein Zfx [Caracal caracal]
Length = 393
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|402857716|ref|XP_003893392.1| PREDICTED: zinc finger protein 281 [Papio anubis]
Length = 908
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 258 PSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 311
>gi|13991105|gb|AAK51203.1|AF260783_1 zinc finger protein [Balaena mysticetus]
gi|13991107|gb|AAK51204.1|AF260784_1 zinc finger protein [Balaena mysticetus]
gi|13991109|gb|AAK51205.1|AF260785_1 zinc finger protein [Balaena mysticetus]
gi|13991111|gb|AAK51206.1|AF260786_1 zinc finger protein [Delphinapterus leucas]
gi|13991115|gb|AAK51208.1|AF260788_1 zinc finger protein [Delphinapterus leucas]
gi|13991117|gb|AAK51209.1|AF260789_1 zinc finger protein [Eschrichtius robustus]
gi|13991119|gb|AAK51210.1|AF260790_1 zinc finger protein [Eschrichtius robustus]
gi|13991123|gb|AAK51212.1|AF260792_1 zinc finger protein [Kogia breviceps]
gi|13991129|gb|AAK51215.1|AF260795_1 zinc finger protein [Kogia sima]
gi|13991133|gb|AAK51217.1|AF260797_1 zinc finger protein [Kogia sima]
gi|13991135|gb|AAK51218.1|AF260798_1 zinc finger protein [Neophocaena phocaenoides]
gi|13991139|gb|AAK51220.1|AF260800_1 zinc finger protein [Neophocaena phocaenoides]
gi|13991141|gb|AAK51221.1|AF260801_1 zinc finger protein [Physeter catodon]
gi|13991143|gb|AAK51222.1|AF260802_1 zinc finger protein [Physeter catodon]
gi|13991147|gb|AAK51224.1|AF260804_1 zinc finger protein [Phocoena phocoena]
gi|13991149|gb|AAK51225.1|AF260805_1 zinc finger protein [Phocoena phocoena]
gi|13991153|gb|AAK51227.1|AF260807_1 zinc finger protein [Stenella longirostris]
gi|13991155|gb|AAK51228.1|AF260808_1 zinc finger protein [Stenella longirostris]
gi|13991159|gb|AAK51230.1|AF260810_1 zinc finger protein [Stenella longirostris orientalis]
gi|13991163|gb|AAK51232.1|AF260812_1 zinc finger protein [Stenella longirostris orientalis]
gi|161598427|gb|ABX74957.1| ZFY [Diceros bicornis michaeli]
Length = 201
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 51 QSCKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
CK C+ T+ + +LL HS+N P ICV C ++ H
Sbjct: 100 HKCKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHM 148
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
IH G+K ++C C Y + L+ HVK KHS ++
Sbjct: 149 RIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 184
>gi|9623262|gb|AAF90085.1| zinc finger protein Zfy [Leopardus tigrinus]
Length = 387
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 108 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 156
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 157 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 190
>gi|260821736|ref|XP_002606259.1| hypothetical protein BRAFLDRAFT_83989 [Branchiostoma floridae]
gi|229291600|gb|EEN62269.1| hypothetical protein BRAFLDRAFT_83989 [Branchiostoma floridae]
Length = 803
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 25/113 (22%)
Query: 36 CQTCPNMSFLNSVI-----------PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPD 81
C TC + +F ++ + P C C+ T NL +++H+ P
Sbjct: 14 CDTCGHRAFTSAALSKHQKIHSKDKPYKCDQCEYSTVLRANLAQHMIKHTGEKP------ 67
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T N+ H H G+K KC +C Y A +K L H+
Sbjct: 68 -----YMCSECGFCTAYQSNLSAHMKRHRGEKPHKCNMCDYAALKKGSLDLHM 115
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 25/113 (22%)
Query: 36 CQTCPNMSFLNSVI-----------PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPD 81
C TC + +F + + P C C+ T NL +++HS P
Sbjct: 350 CDTCGHRAFTLAALSHHLKTHSKEKPYKCNQCEYSTVLSANLAQHMIKHSGEKP------ 403
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T N+ H H G+K KC C Y A +K L+ H+
Sbjct: 404 -----YMCSECGFRTAYQSNLSAHMKRHRGEKPHKCNQCDYAALKKANLKAHM 451
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C CD+ T N+ H H G+K KC C + A QK L H+ KHS
Sbjct: 667 YMCGQCDFRTKFRSNLTTHMKRHTGEKPHKCNQCDFAAVQKAHLDLHMA-KHS 718
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C N+ + L EH +R + ++C C Y T ++ H IH
Sbjct: 263 PYKCHQC-NYATIGSFQLKEH-------LRKHTGEKPYMCGECGYRTNFRSSLTIHIKIH 314
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHV 134
G+K KC LC Y A +K L H+
Sbjct: 315 TGEKPLKCNLCDYTALRKHSLVMHM 339
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY---GAYQ-KEKLQFHVKNK 137
+ C C+Y T + ++ H IH G+K +KC C+Y G++Q KE L+ H K
Sbjct: 236 YRCQKCEYRTAVKSSLTKHLRIHTGEKPYKCHQCNYATIGSFQLKEHLRKHTGEK 290
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 25/113 (22%)
Query: 36 CQTCPNMSFLNSVI-----------PQSCKHCKNFT---SSDVNLLMEHSENCPCMVRPD 81
C TC + +F ++ + P C C+ T +S +++H+ P
Sbjct: 126 CDTCGHRAFTSADLSKHLKIHSKDKPYKCDQCEYTTVLRASLAEHMLKHTGEKP------ 179
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C + T NM H H G+K KC C Y A +K L+ H+
Sbjct: 180 -----YMCSECGFCTAYQSNMSAHMKRHRGEKPHKCNQCDYAALKKGNLKAHM 227
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
+ C C+Y T++S N+ H + H G+K + C C + + L H+K K
Sbjct: 376 YKCNQCEYSTVLSANLAQHMIKHSGEKPYMCSECGFRTAYQSNLSAHMKRHRGEK 430
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
C C+Y + N+R+H L H G+K + C C Y + L H+K
Sbjct: 753 CDQCEYAAVCKSNLRSHMLKHTGEKPYMCGECGYRTNFRSNLATHMKR 800
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
C CD+ + ++ H H G+K + C +C Y AY ++ + HVK
Sbjct: 697 CNQCDFAAVQKAHLDLHMAKHSGEKPYSCEVCGYRAYSRQHVSQHVK 743
>gi|9623224|gb|AAF90066.1| zinc finger protein Zfx [Neofelis nebulosa]
Length = 393
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 109 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 157
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 158 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 191
>gi|9623264|gb|AAF90086.1| zinc finger protein Zfy [Leopardus wiedii]
Length = 392
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 108 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 156
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 157 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 190
>gi|410986214|ref|XP_003999406.1| PREDICTED: zinc finger protein 281 [Felis catus]
Length = 897
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
P + IC C S ++R H LIH G++ F+C CS G QK LQ H K
Sbjct: 257 PSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEK 310
>gi|395506841|ref|XP_003757738.1| PREDICTED: zinc finger protein 64 homolog, isoforms 1 and 2
[Sarcophilus harrisii]
Length = 934
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
PVK C C Y ++ H IH ++ FKC LCS+ Q+ L HVK H K
Sbjct: 582 PVK----CPECSYSCAHKAALKVHERIHGQERPFKCELCSFDTKQRSNLTTHVKKVHGDK 637
Query: 142 VKD 144
VK
Sbjct: 638 VKS 640
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C +CDY S ++ H IH ++ FKC +C Y + +L H+++
Sbjct: 442 YKCKSCDYAAADSSSLNKHQRIHSNERPFKCQICPYASRNSSQLTVHLRS 491
>gi|391343767|ref|XP_003746177.1| PREDICTED: zinc finger protein 775-like [Metaseiulus occidentalis]
Length = 299
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
FIC C+Y + ++R H +H G++ + C +C Y + L H++ +H
Sbjct: 70 FICGKCNYRSERFDSLRKHCRVHTGERPYACPICGYRSKTNSNLHAHIRTRH 121
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
K +C C Y T+ + +H H G+K FKC C Y A Q+ L+ H+
Sbjct: 221 KHVCNFCGYSTVYKHVLTHHIRTHTGEKPFKCDFCDYRATQRSNLRKHM 269
>gi|315139199|gb|ADT80792.1| Y-linked zinc finger protein [Ailurus fulgens]
Length = 132
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 41 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 89
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 90 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 123
>gi|195126088|ref|XP_002007506.1| GI12352 [Drosophila mojavensis]
gi|193919115|gb|EDW17982.1| GI12352 [Drosophila mojavensis]
Length = 796
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK 143
+ C C Y ++ +++ H LIH K FKC LCS Q++ L+ HV H+ K
Sbjct: 497 YRCTLCSYASVSQRHLDAHMLIHTDSKPFKCNLCSQAFRQRQLLRRHVNLMHNEDYK 553
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 10/121 (8%)
Query: 21 CNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQ--SCKHCKNFTSSDVNLLMEHSENCPCMV 78
N SD+D Q + NS Q +C HC N+T++ L+ H V
Sbjct: 237 ANITASSDVDFVPSGNQYKLKPAATNSAGSQKFACSHC-NYTTNKKFLISRH-------V 288
Query: 79 RPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
R + F C C+ + + NH H+G+K KC LC +L H + KH
Sbjct: 289 RSHNSEMSFKCSICERGFKSNMGLVNHLNTHMGNKPHKCKLCESAFTTNGELIRHTRYKH 348
Query: 139 S 139
+
Sbjct: 349 T 349
>gi|13991127|gb|AAK51214.1|AF260794_1 zinc finger protein [Kogia breviceps]
gi|13991131|gb|AAK51216.1|AF260796_1 zinc finger protein [Kogia sima]
Length = 200
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 51 QSCKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
CK C+ T+ + +LL HS+N P ICV C ++ H
Sbjct: 99 HKCKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHM 147
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
IH G+K ++C C Y + L+ HVK KHS ++
Sbjct: 148 RIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 183
>gi|426249870|ref|XP_004018670.1| PREDICTED: LOW QUALITY PROTEIN: fez family zinc finger protein 2
[Ovis aries]
Length = 509
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
F+C C N +NH L H G+KQ+KC +C+ +Q L FH+ + K
Sbjct: 411 FVCEFCGKGFHQKGNYKNHKLTHSGEKQYKCTICNKAFHQVYNLTFHMHTHNDKK 465
>gi|327268294|ref|XP_003218933.1| PREDICTED: zinc finger X-chromosomal protein-like [Anolis
carolinensis]
Length = 811
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 509 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 557
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK +HS ++
Sbjct: 558 HTGEKPYQCQYCEYRSADSSNLKTHVKTRHSKEM 591
>gi|301624203|ref|XP_002941414.1| PREDICTED: gastrula zinc finger protein 5-1-like [Xenopus
(Silurana) tropicalis]
Length = 293
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 23/52 (44%)
Query: 82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
P FIC C R H L+H G+K F C CS YQ+ +L H
Sbjct: 181 PESKPFICSVCGKKYNSKNGFRAHKLVHTGEKPFACSECSKSFYQRSRLHIH 232
>gi|260822994|ref|XP_002603968.1| hypothetical protein BRAFLDRAFT_71744 [Branchiostoma floridae]
gi|229289293|gb|EEN59979.1| hypothetical protein BRAFLDRAFT_71744 [Branchiostoma floridae]
Length = 574
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C C +++++D + L +H V + ++C C Y T ++ H IH
Sbjct: 211 PYKCDQC-DYSAADKSTLEQH-------VAKHNGEKPYMCGDCGYRTAYRSHLSRHIRIH 262
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
G++ +KC C Y A K L+ HV KHS
Sbjct: 263 TGERPYKCDQCGYSAAHKSTLEQHVA-KHS 291
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++CV C Y T ++ H IH G++ +KC C Y A K L+ HV + K
Sbjct: 184 YMCVECGYRTDKKSHLSRHMRIHTGERPYKCDQCDYSAADKSTLEQHVAKHNGEK 238
>gi|427797403|gb|JAA64153.1| Putative gonadotropin inducible transcription factor, partial
[Rhipicephalus pulchellus]
Length = 553
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 53 CKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD 112
C +C + SS +L M +R + F C C+Y T ++R H + H G
Sbjct: 406 CSYCGHRASSQSSLKMH--------LRQHTGEKPFACNLCEYRTGDHNSLRRHKMRHSGT 457
Query: 113 KQFKCCLCSYGAYQKEKLQFHVKNKH 138
K +KC C Y Q + H+ KH
Sbjct: 458 KPYKCPHCPYACIQSSTFKSHLHRKH 483
>gi|9623302|gb|AAF90105.1| zinc finger protein Zfy [Puma concolor]
Length = 392
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 108 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 156
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 157 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 190
>gi|10716028|dbj|BAB16366.1| zinc finger protein [Lemur catta]
Length = 132
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 41 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 89
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 90 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 123
>gi|9623258|gb|AAF90083.1| zinc finger protein Zfy [Leopardus colocolo]
Length = 384
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 108 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 156
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 157 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 190
>gi|260781013|ref|XP_002585623.1| hypothetical protein BRAFLDRAFT_258062 [Branchiostoma floridae]
gi|229270641|gb|EEN41634.1| hypothetical protein BRAFLDRAFT_258062 [Branchiostoma floridae]
Length = 327
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + + H H G+K +KC C Y A QK L H+
Sbjct: 44 YMCGECGYRTNLKSTLSKHIRTHTGEKPYKCDQCDYSAAQKANLDLHL 91
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + + H H G+K +KC C Y A QK L H+
Sbjct: 241 YMCGECGYRTNLKSTLSKHIRTHTGEKPYKCDQCDYSAAQKANLDLHL 288
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 14/88 (15%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
P C C + NL L +H+ P ++C C Y N+ H
Sbjct: 71 PYKCDQCDYSAAQKANLDLHLTKHTGEKP-----------YMCGECGYRAACKSNLSRHM 119
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
H G+K FKC C+Y A QK L H+
Sbjct: 120 KTHTGEKPFKCDQCNYSAAQKSSLVKHL 147
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 87 FICVACDYFTIISQ-NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ C CDY + N+ H H GDK +KC C Y A QK L HV
Sbjct: 184 YKCDQCDYSAAPRKSNLARHRTKHTGDKPYKCDQCDYSAAQKCALVIHV 232
>gi|13991121|gb|AAK51211.1|AF260791_1 zinc finger protein [Eschrichtius robustus]
Length = 201
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 51 QSCKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
CK C+ T+ + +LL HS+N P ICV C ++ H
Sbjct: 100 HKCKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHM 148
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
IH G+K ++C C Y + L+ HVK KHS ++
Sbjct: 149 RIHTGEKPYECQYCEYRSADSSNLKTHVKTKHSKEM 184
>gi|9623290|gb|AAF90099.1| zinc finger protein Zfy [Catopuma temminckii]
Length = 387
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 108 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 156
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 157 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 190
>gi|260810244|ref|XP_002599913.1| hypothetical protein BRAFLDRAFT_58116 [Branchiostoma floridae]
gi|229285197|gb|EEN55925.1| hypothetical protein BRAFLDRAFT_58116 [Branchiostoma floridae]
Length = 377
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+ C CDY T + ++ H H G++ + C C Y A +K KL H++ KH
Sbjct: 325 YKCEECDYRTAYNPDLTRHRRRHTGERPYSCQECDYKAKEKGKLNRHMRFKH 376
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C N+ +S LL++H ++ +P + C C+Y T I
Sbjct: 28 HMRKHTGEKPFKCDQC-NYNASYKTLLVKHMKS---HTDAEP----YSCDICEYQTYIKS 79
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
N+ H + H K +KC C + A K L H + +H+
Sbjct: 80 NVERHMMCHSAVKPYKCEECDFRAVGKSYLVKHRRRRHT 118
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 20/133 (15%)
Query: 23 KYVPSDIDVFIGHCQTCPNMSFLNS-----------VIPQSCKHCKNFTSSDVNLLMEHS 71
K++ S D C C +++ S V P C+ C +F + + L++H
Sbjct: 55 KHMKSHTDAEPYSCDICEYQTYIKSNVERHMMCHSAVKPYKCEEC-DFRAVGKSYLVKHR 113
Query: 72 ENCPCMVRP---DPVKYK-----FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYG 123
+P YK + C CD+ I N H + H G K +KC C Y
Sbjct: 114 RRRHTGEKPYSCQECDYKANAEPYSCEICDHKAYIKANFETHMMRHAGVKPYKCEECDYS 173
Query: 124 AYQKEKLQFHVKN 136
K L H +
Sbjct: 174 TAHKSDLIKHRRR 186
>gi|260787843|ref|XP_002588961.1| hypothetical protein BRAFLDRAFT_89152 [Branchiostoma floridae]
gi|229274133|gb|EEN44972.1| hypothetical protein BRAFLDRAFT_89152 [Branchiostoma floridae]
Length = 433
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y T + ++ H H G+K +KC C Y A K L++H+
Sbjct: 326 YMCGECGYRTAHTSHLSRHMRTHTGEKPYKCEQCDYSATTKGSLEYHL 373
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
Query: 50 PQSCKHCKNFTSSDVNL---LMEHSENCPCM------VRPDPVKYKFICVACDYFTIISQ 100
P C C + NL L H+ + P M +R + + C CDY
Sbjct: 84 PYKCDQCDYSAARKSNLNQHLAMHTGDKPYMCGECGHMRTHTGEKPYKCDQCDYSATRKY 143
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H IH G+K + C C Y QK L +H++
Sbjct: 144 HLDQHQAIHTGEKPYMCGECGYRTAQKSTLSYHMRT 179
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 22/50 (44%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
F C CDY + H H GDK + C C Y A QK L H++
Sbjct: 242 FKCDQCDYSAAMKSTFDRHLAKHTGDKPYMCGECGYRATQKSHLSKHMRT 291
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY ++ H H GDK + C C Y A QK L H++
Sbjct: 354 YKCEQCDYSATTKGSLEYHLAQHTGDKPYMCGECGYRAAQKSDLVKHMRT 403
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++C C Y + HT H G+K +KC C Y A +K L H+
Sbjct: 57 YMCGECGYRAARKSLLSEHTRTHTGEKPYKCDQCDYSAARKSNLNQHL 104
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++C C Y T + H H G+K +KC C Y A K L H+ KHS
Sbjct: 158 YMCGECGYRTAQKSTLSYHMRTHTGEKPYKCDQCDYSAAAKSTLDRHLA-KHS 209
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH 133
++C C Y ++ H H G+K +KC C Y A QK L H
Sbjct: 270 YMCGECGYRATQKSHLSKHMRTHTGEKPYKCNQCDYSAAQKSSLYQH 316
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C+ C ++ +L L +H+ + P ++C C Y
Sbjct: 344 HMRTHTGEKPYKCEQCDYSATTKGSLEYHLAQHTGDKP-----------YMCGECGYRAA 392
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H H G+K +KC C Y A +K L H K
Sbjct: 393 QKSDLVKHMRTHTGEKPYKCDQCDYSATKKSTLNNHCKT 431
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 14/97 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C ++ L L +HS + P ++C C Y T
Sbjct: 176 HMRTHTGEKPYKCDQCDYSAAAKSTLDRHLAKHSGDKP-----------YLCGECGYRTA 224
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ H H G+K FKC C Y A K H+
Sbjct: 225 RKSTLSIHLRTHTGEKPFKCDQCDYSAAMKSTFDRHL 261
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C CDY + H H GDK + C C Y +K L H++
Sbjct: 186 YKCDQCDYSAAAKSTLDRHLAKHSGDKPYLCGECGYRTARKSTLSIHLRT 235
>gi|13991145|gb|AAK51223.1|AF260803_1 zinc finger protein [Physeter catodon]
Length = 201
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 51 QSCKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT 106
CK C+ T+ + +LL HS+N P ICV C ++ H
Sbjct: 100 HKCKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHM 148
Query: 107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
IH G+K ++C C Y + L+ HVK KHS ++
Sbjct: 149 RIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 184
>gi|10716026|dbj|BAB16365.1| zinc finger protein [Lemur catta]
Length = 132
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 41 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 89
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 90 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 123
>gi|10715994|dbj|BAB16349.1| zinc finger protein [Pan troglodytes]
gi|10715998|dbj|BAB16351.1| zinc finger protein [Gorilla gorilla]
gi|10716002|dbj|BAB16353.1| zinc finger protein [Pongo pygmaeus]
gi|10716006|dbj|BAB16355.1| zinc finger protein [Hylobates agilis]
gi|10716010|dbj|BAB16357.1| zinc finger protein [Symphalangus syndactylus]
gi|10716014|dbj|BAB16359.1| zinc finger protein [Macaca fuscata]
gi|10716018|dbj|BAB16361.1| zinc finger protein [Chlorocebus aethiops]
gi|10716022|dbj|BAB16363.1| zinc finger protein [Saguinus tripartitus]
gi|10716024|dbj|BAB16364.1| zinc finger protein [Saguinus tripartitus]
gi|13516463|dbj|BAB40313.1| zinc finger protein [Canis lupus familiaris]
gi|116293929|gb|ABJ98152.1| X-linked zinc finger protein [Moschus berezovskii]
gi|160960108|emb|CAO02407.1| Y-linked zinc finger protein [Ursus maritimus]
gi|160960110|emb|CAO02408.1| Y-linked zinc finger protein [Ursus arctos]
gi|160960112|emb|CAO02409.1| Y-linked zinc finger protein [Ursus americanus]
gi|160960114|emb|CAO02410.1| Y-linked zinc finger protein [Helarctos malayanus]
gi|160960116|emb|CAO02411.1| Y-linked zinc finger protein [Melursus ursinus]
gi|160960118|emb|CAO02412.1| Y-linked zinc finger protein [Ursus thibetanus]
gi|160960120|emb|CAO02413.1| Y-linked zinc finger protein [Tremarctos ornatus]
gi|242098054|emb|CAQ00072.1| X-linked zinc finger protein [Ursus arctos]
gi|242098056|emb|CAQ00073.1| X-linked zinc finger protein [Ursus maritimus]
gi|242098058|emb|CAQ00074.1| X-linked zinc finger protein [Ursus americanus]
gi|242098060|emb|CAQ00075.1| X-linked zinc finger protein [Ursus thibetanus]
gi|242098062|emb|CAQ00076.1| X-linked zinc finger protein [Helarctos malayanus]
gi|242098064|emb|CAQ00077.1| X-linked zinc finger protein [Melursus ursinus]
gi|242098066|emb|CAQ00078.1| X-linked zinc finger protein [Tremarctos ornatus]
gi|242098068|emb|CAQ00079.1| X-linked zinc finger protein [Ailuropoda melanoleuca]
gi|270311004|gb|ACZ72610.1| X-linked zinc finger protein [Bradypus variegatus]
gi|386684114|gb|AFJ19862.1| zinc-finger protein, partial [Martes zibellina]
gi|386684116|gb|AFJ19863.1| zinc-finger protein, partial [Martes zibellina]
gi|386684118|gb|AFJ19864.1| zinc-finger protein, partial [Martes foina]
gi|386684120|gb|AFJ19865.1| zinc-finger protein, partial [Martes foina]
Length = 132
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 41 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 89
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 90 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 123
>gi|260814494|ref|XP_002601950.1| hypothetical protein BRAFLDRAFT_86434 [Branchiostoma floridae]
gi|229287253|gb|EEN57962.1| hypothetical protein BRAFLDRAFT_86434 [Branchiostoma floridae]
Length = 514
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
+ICV C Y T N+ H H +K +KC LC Y A +K L H+
Sbjct: 182 YICVECGYDTADKSNLAQHKKTHTENKPYKCDLCEYSAGRKADLDTHM 229
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C +C +++S L H M + VK ++C C Y T
Sbjct: 394 HMKAHTGEKPHQCDYC-DYSSVRKRDLDAH------MAKHTGVK-PYLCWQCGYRTADRS 445
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
++R H IH G+ +C LC Y +K L H+
Sbjct: 446 SLRKHVKIHTGELHHRCQLCDYSTARKGDLDRHM 479
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++ S+ + L +H ++ + + C CD+ T Q
Sbjct: 116 HMKIHTEGRPHKCGKC-DYRSAKRSHLNQH-------MKTHTGEKPYACDLCDFCTAWKQ 167
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N+ H H GDK + C C Y K L H K
Sbjct: 168 NLDIHMAKHRGDKPYICVECGYDTADKSNLAQHKK 202
>gi|62896983|dbj|BAD96432.1| zinc finger protein 64 isoform d variant [Homo sapiens]
Length = 410
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD 144
+ C CDY S ++ H IH ++ FKC +C Y +L H+++ ++++ D
Sbjct: 203 YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYAGRNSSQLTVHLRSHTASELDD 260
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
P C+ C S NL M C V+P C CDY + S +++ H IH
Sbjct: 329 PHKCEFCDKCFSRKDNLTMH--MRCHTSVKP------HKCHLCDYAAVDSSSLKKHLRIH 380
Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ +KC LC Y + +L H+++
Sbjct: 381 SDERPYKCQLCPYASRNSSQLTVHLRS 407
>gi|426253929|ref|XP_004020642.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 407 [Ovis aries]
Length = 2175
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 53 CKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
CK+C K SS+ + H +R F C C + T + RNH HLG
Sbjct: 1490 CKYCGKMCRSSNSMAFLAH-------IRTHTGSKPFKCKICHFATAQLGDARNHVKRHLG 1542
Query: 112 DKQFKCCLCSYGAYQKEKLQFHVKNKH 138
+++KC +C K+ L H+ KH
Sbjct: 1543 MREYKCHVCGVAFVMKKHLNTHLLGKH 1569
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL-- 107
P C C NF S+ + L H R + + C CDY + ++N+R H L
Sbjct: 1664 PFKCDEC-NFASTTQSHLTRHK-------RVHTGEKPYRCPWCDYRSNCAENIRKHILHT 1715
Query: 108 -IHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
H G K + C C YG + + H+K +H
Sbjct: 1716 GKHEGVKMYNCPKCDYGTNIPVEFRNHLKEQH 1747
>gi|9623276|gb|AAF90092.1| zinc finger protein Zfy [Prionailurus viverrinus]
Length = 387
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 108 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 156
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 157 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 190
>gi|326667465|ref|XP_700431.5| PREDICTED: hypothetical protein LOC571721 [Danio rerio]
Length = 2943
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C+HC S NL E V+P F C C +
Sbjct: 872 HMRVHTGEKPYHCQHCGKSFSQQTNL--EGHMRIHSGVKP------FTCQECGKSFVHKH 923
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N++ H +H G+K FKC C G K LQ H++
Sbjct: 924 NLQLHLRVHTGEKPFKCQHCGKGFVHKHNLQLHLR 958
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 50 PQSCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
P C+HC K+F +NC +R + + C CD N+ H +
Sbjct: 2494 PYECQHCGKSFNQK---------QNCEAHMRIHTGEKPYKCQQCDMQFTQKANLTVHMRV 2544
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVK 135
H G+K F C C +QK+ L H++
Sbjct: 2545 HTGEKTFNCQHCGKSFFQKQNLNVHMR 2571
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M + P C+HC S +L E +P + C+ C + Q
Sbjct: 1488 HMRIHSREKPYKCQHCGESFSQKAHLTGH--ERVHTKEKP------YTCLQCGKCFSLKQ 1539
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK 135
N++ H IH G+K + CC C QK L H +
Sbjct: 1540 NLKLHVRIHSGEKPYHCCDCGKSFSQKPNLDVHRR 1574
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C+HC S NL VR + F C C I Q
Sbjct: 2217 HMRVHTGEKPFKCQHCGKSFSLQKNL--------DGHVRIHTGEKPFSCPQCGKSFIDKQ 2268
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV 134
N + H +H G+K ++C C G QK L H+
Sbjct: 2269 NFKVHMRVHTGEKPYQCQQCGKGFSQKANLDCHM 2302
>gi|326421470|gb|ADZ73763.1| pleiomorphic adenoma protein-like 2 [Balaenoptera omurai]
Length = 238
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 52 SCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
SCK C + F S+ L+EH + V + K C CD +++R H ++H
Sbjct: 43 SCKVCLQTFESTQA--LLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHT 100
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G K F C C+ +K+ L HVK HS ++
Sbjct: 101 GRKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 132
>gi|260832466|ref|XP_002611178.1| hypothetical protein BRAFLDRAFT_88423 [Branchiostoma floridae]
gi|229296549|gb|EEN67188.1| hypothetical protein BRAFLDRAFT_88423 [Branchiostoma floridae]
Length = 218
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C ++TS + L H +P + C C Y T
Sbjct: 73 HMRTHTGEKPHKCNQC-DYTSVRKSSLARHHLAKHTAEKP------YKCGECGYGTAQMY 125
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
++ H IH G+K +KC C Y A QK L H++ KHS
Sbjct: 126 HLSQHMRIHTGEKPYKCDQCDYSATQKWNLDQHLR-KHS 163
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
++C C Y T+ + H H G+K KC C Y + +K L H KH+ +
Sbjct: 55 YMCGECGYRTVQKSTLSQHMRTHTGEKPHKCNQCDYTSVRKSSLARHHLAKHTAE 109
>gi|17530009|gb|AAL40668.1| zinc finger protein ZFX, partial [Elephas maximus]
Length = 116
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 28 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 76
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 77 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 110
>gi|270311002|gb|ACZ72609.1| X-linked zinc finger protein [Bradypus torquatus]
Length = 141
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 47 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 95
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 96 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 129
>gi|260823110|ref|XP_002604026.1| hypothetical protein BRAFLDRAFT_57765 [Branchiostoma floridae]
gi|229289351|gb|EEN60037.1| hypothetical protein BRAFLDRAFT_57765 [Branchiostoma floridae]
Length = 263
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNL---LMEHSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C+ + NL L +H+ P ++C C + T
Sbjct: 56 HMKTHTGEKPYKCDQCEYAAAHKSNLDKHLRKHTGEKP-----------YMCGECGFRTT 104
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+++ H H G+K +KC C Y A QK L H++
Sbjct: 105 HKESLSRHMRTHTGEKPYKCDQCDYSAAQKSTLDQHLRK 143
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 41 NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
+M P C C +++++ + L +H +R + + C C Y ++
Sbjct: 112 HMRTHTGEKPYKCDQC-DYSAAQKSTLDQH-------LRKHTGEKPYTCGECGYRSVQKS 163
Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H H G+K +KC C Y K L H++
Sbjct: 164 DLSKHMRTHTGEKPYKCGECGYRTAYKSDLSRHMRT 199
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
+ C C Y T ++ H H G+K + C C Y A +K L H++
Sbjct: 178 YKCGECGYRTAYKSDLSRHMRTHSGEKPYMCGQCDYSATEKSHLDRHLRK 227
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 31/80 (38%)
Query: 57 KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK 116
K + + H E+ +R + + C CDY + H H G+K +
Sbjct: 92 KPYMCGECGFRTTHKESLSRHMRTHTGEKPYKCDQCDYSAAQKSTLDQHLRKHTGEKPYT 151
Query: 117 CCLCSYGAYQKEKLQFHVKN 136
C C Y + QK L H++
Sbjct: 152 CGECGYRSVQKSDLSKHMRT 171
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 14/99 (14%)
Query: 41 NMSFLNSVIPQSCKHCKNFTS--SDVNLLME-HSENCPCMVRPDPVKYKFICVACDYFTI 97
+M P C C T+ SD++ M HS P ++C CDY
Sbjct: 168 HMRTHTGEKPYKCGECGYRTAYKSDLSRHMRTHSGEKP-----------YMCGQCDYSAT 216
Query: 98 ISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
++ H H G+K + C C Y QK L H++
Sbjct: 217 EKSHLDRHLRKHTGEKPYMCGECGYRTTQKSVLSRHMRT 255
>gi|118599853|gb|AAH30967.1| ZNF518A protein [Homo sapiens]
Length = 348
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 55/139 (39%), Gaps = 31/139 (22%)
Query: 18 CLYCNKYVPSDIDVFIGH----------CQTCPNMS---FLNSVIPQSCKHCKN------ 58
C CN + +D VF H C C N S LN + HC N
Sbjct: 152 CEMCN-FSANDFQVFKQHRRTHRSTLVKCDICNNESVYTLLNLTKHFTSTHCVNGNFQCE 210
Query: 59 ---FTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQF 115
F++ DV ++H + R + + YK C C + ++ H IH G F
Sbjct: 211 KCKFSTQDVGTFVQH------IHRHNGIHYK--CGKCHHVCFTKGELQKHLHIHSGTFPF 262
Query: 116 KCCLCSYGAYQKEKLQFHV 134
C CSYGA ++E L HV
Sbjct: 263 TCQYCSYGATRREHLVRHV 281
>gi|57282607|emb|CAD45342.2| Zinc finger X-chromosomal protein [Bos taurus]
Length = 137
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 43 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 91
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 92 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 125
>gi|2576309|emb|CAA05201.1| Zfx [Monodelphis domestica]
Length = 180
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 58 NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC 117
++ +++ LL H ++ K+ ICV C ++ H IH G+K ++C
Sbjct: 77 DYETAEQGLLNRH------LLAVHSKKFPHICVECGKGFRHPSELKKHMRIHTGEKPYQC 130
Query: 118 CLCSYGAYQKEKLQFHVKNKHSTKV 142
C Y + L+ HVK KHS ++
Sbjct: 131 QYCEYRSADSSNLKTHVKTKHSKEM 155
>gi|17530017|gb|AAL40672.1| zinc finger protein ZFX, partial [Canis lupus familiaris]
gi|17530019|gb|AAL40673.1| zinc finger protein ZFY, partial [Canis lupus familiaris]
gi|17530021|gb|AAL40674.1| zinc finger protein ZFX, partial [Macaca tonkeana]
Length = 116
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 53 CKHCKNFTSS----DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
CK C+ T+ + +LL HS+N P ICV C ++ H I
Sbjct: 28 CKFCEYETAEQGLLNRHLLAVHSKNFP-----------HICVECGKGFRHPSELKKHMRI 76
Query: 109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
H G+K ++C C Y + L+ HVK KHS ++
Sbjct: 77 HTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEM 110
>gi|326322028|gb|ADZ54014.1| pleiomorphic adenoma-like protein 2 [Mesoplodon densirostris]
gi|326421472|gb|ADZ73764.1| pleiomorphic adenoma protein-like 2 [Kogia sima]
gi|327241686|gb|AEA40624.1| pleiomorphic adenoma-like protein 2, partial [Hippopotamus
amphibius]
gi|327241688|gb|AEA40625.1| pleiomorphic adenoma-like protein 2, partial [Sus scrofa]
gi|327241690|gb|AEA40626.1| pleiomorphic adenoma-like protein 2, partial [Camelus bactrianus]
Length = 238
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 52 SCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL 110
SCK C + F S+ L+EH + V + K C CD +++R H ++H
Sbjct: 43 SCKVCLQTFESTQA--LLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHT 100
Query: 111 GDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
G K F C C+ +K+ L HVK HS ++
Sbjct: 101 GRKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 132
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.137 0.463
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,264,896,965
Number of Sequences: 23463169
Number of extensions: 83499394
Number of successful extensions: 492043
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9282
Number of HSP's successfully gapped in prelim test: 4913
Number of HSP's that attempted gapping in prelim test: 388084
Number of HSP's gapped (non-prelim): 102444
length of query: 144
length of database: 8,064,228,071
effective HSP length: 108
effective length of query: 36
effective length of database: 9,825,173,115
effective search space: 353706232140
effective search space used: 353706232140
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 71 (32.0 bits)