RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10075
(373 letters)
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 40.7 bits (96), Expect = 6e-06
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC 293
KP+ C+ C F + + H+ + H +P KC
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 37.3 bits (87), Expect = 1e-04
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 171 FQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTL 204
+ C C + F + H + HT+E+P KC +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 35.4 bits (82), Expect = 4e-04
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 84 ECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCN 115
C C FS L HI++ HT++RP C
Sbjct: 7 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 32.7 bits (75), Expect = 0.004
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 109 DRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTI 146
+P+ C C + H + H+ ++PHKC +
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHT-SERPHKCQV 39
Score = 31.5 bits (72), Expect = 0.009
Identities = 7/32 (21%), Positives = 16/32 (50%)
Query: 289 KPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYF 320
KP+ C C + L H+ ++H++++
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPH 35
Score = 30.3 bits (69), Expect = 0.029
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 139 DKPHKCTICESTYLTKVELKNHILKIHQGQTRFQC 173
KP+ C C + L HI ++H + +C
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 30.3 bits (69), Expect = 0.029
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 197 EKPFKCTLCSYKAKRNFELKQHILRIH 223
KP+ C C R L HI ++H
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVH 29
Score = 26.9 bits (60), Expect = 0.47
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 231 YHCTYCDYICSSRTILKSHINKKHANDEDKPFTCE 265
Y C C S L HI + H + ++P C+
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTS--ERPHKCQ 38
Score = 25.3 bits (56), Expect = 1.6
Identities = 7/36 (19%), Positives = 17/36 (47%)
Query: 52 KLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSL 87
K + C C + ++ H+ ++H +R +C +
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 38.4 bits (90), Expect = 3e-05
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNI 227
H+ EKP++C +C + ++ +K HIL+ H +N+
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTENV 36
Score = 33.8 bits (78), Expect = 0.001
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS 315
R H G KP++C C + T +K H+ + H+
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT 33
Score = 32.3 bits (74), Expect = 0.005
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 75 KIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTND 109
+ H ++ EC +C + F+ + +K HI +KHT +
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 31.9 bits (73), Expect = 0.006
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 163 KIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNE 197
+ H G+ ++C C RF H L+ HT
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 31.9 bits (73), Expect = 0.007
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 104 RKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSK 137
R H+ ++P+ C C + + H L+KH++
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 29.6 bits (67), Expect = 0.051
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 133 RKHSKGDKPHKCTICESTYLTKVELKNHILKIH 165
R HS G+KP++C IC + + +K HIL+ H
Sbjct: 1 RTHS-GEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 29.2 bits (66), Expect = 0.064
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 259 DKPFTCEHCDSKFCKKYDMKMHMSRAH 285
+KP+ C C ++F + MKMH+ + H
Sbjct: 6 EKPYECYICHARFTQSGTMKMHILQKH 32
Score = 24.6 bits (54), Expect = 2.7
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 48 HFEQKLFSCDLCEYQTNTKIYIRRHMLKIH 77
H +K + C +C + ++ H+L+ H
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 23.4 bits (51), Expect = 7.9
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 221 RIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHAND 257
R H E Y C C + +K HI +KH +
Sbjct: 1 RTHSG--EKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 23.0 bits (50), Expect = 9.1
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 312 RIHSNQK-YFCGSCNFSCTSNTDLLEHVQTNH 342
R HS +K Y C C+ T + + H+ H
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 31.8 bits (73), Expect = 0.006
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIH 223
H+ EKP+ C C R+ L QH R+H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQH-QRVH 30
Score = 28.4 bits (64), Expect = 0.12
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 285 HYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS 315
H G KP+ C C + L H R+H+
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQ-RVHT 31
Score = 26.4 bits (59), Expect = 0.56
Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYG 287
+KP+ C C F + + H R H G
Sbjct: 5 EKPYGCVECGKAFSRSSILVQHQ-RVHTG 32
Score = 26.4 bits (59), Expect = 0.63
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 76 IHLRQRNLECSLCDSTFSDNMDLKKHIQRKHT 107
IH ++ C C FS + L +H QR HT
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQH-QRVHT 31
Score = 24.9 bits (55), Expect = 1.7
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 138 GDKPHKCTICESTYLTKVELKNHILKIHQG 167
G+KP+ C C + L H ++H G
Sbjct: 4 GEKPYGCVECGKAFSRSSILVQH-QRVHTG 32
Score = 24.9 bits (55), Expect = 2.1
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 106 HTNDRPFSCNFCDYKSKTKYDITSHSLRKHS 136
H+ ++P+ C C + H R H+
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQH-QRVHT 31
Score = 24.5 bits (54), Expect = 2.5
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 164 IHQGQTRFQCSFCDRRFYFKNECTKHYLEH 193
IH G+ + C C + F + +H H
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 31.2 bits (71), Expect = 0.012
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKY 319
R H G KP+ CS C+ K L H + + + +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHF-KRYHDPNF 36
Score = 30.4 bits (69), Expect = 0.024
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQD 225
HT EKP+ C+ C ++ L H + + D
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMH-FKRYHD 33
Score = 26.2 bits (58), Expect = 0.70
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 163 KIHQGQTRFQCSFCDRRFYFKNECTKHYLEHH 194
+ H G+ + CS CD+ F K H+ +H
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 25.8 bits (57), Expect = 0.88
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 75 KIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTN 108
+ H ++ CS CD TF L H +++ +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMH-FKRYHD 33
Score = 25.0 bits (55), Expect = 1.7
Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 104 RKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHS 136
R HT ++P++C+ CD + K + H +++
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMH-FKRYH 32
Score = 24.2 bits (53), Expect = 3.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 259 DKPFTCEHCDSKFCKKYDMKMHM 281
+KP+ C HCD F +K + MH
Sbjct: 6 EKPYACSHCDKTFRQKQLLDMHF 28
Score = 23.5 bits (51), Expect = 6.8
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 133 RKHSKGDKPHKCTICESTYLTKVELKNHILKIHQG 167
R H+ G+KP+ C+ C+ T+ K L H K +
Sbjct: 1 RTHT-GEKPYACSHCDKTFRQKQLLDMH-FKRYHD 33
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 30.5 bits (69), Expect = 0.018
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNI 227
+ ++PF C +C +H L++H D +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARH-LKVHTDTL 34
Score = 27.0 bits (60), Expect = 0.31
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 285 HYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN 316
G +PF C C TTK H+ ++H++
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHL-KVHTD 32
Score = 24.7 bits (54), Expect = 2.8
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 77 HLRQRNLECSLCDSTFSDNMDLKKHIQRKHTN 108
+R C +C S F+ + +H + HT+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARH-LKVHTD 32
Score = 23.2 bits (50), Expect = 7.6
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 259 DKPFTCEHCDSKFCKKYDMKMHM 281
+PF C C S F K + H+
Sbjct: 5 KRPFVCRICLSAFTTKANCARHL 27
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 29.0 bits (64), Expect = 0.064
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 289 KPFKCSFCEYKCTTKFGLKSHVTRIHSNQK 318
K ++C +CE++ LK+H+ HS +K
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK 30
Score = 27.4 bits (60), Expect = 0.28
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 231 YHCTYCDYICSSRTILKSHINKKHANDE 258
Y C YC++ + + LK+HI KH+ ++
Sbjct: 3 YQCQYCEFRSADSSNLKTHIKTKHSKEK 30
Score = 24.7 bits (53), Expect = 2.1
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 110 RPFSCNFCDYKSKTKYDITSHSLRKHSK 137
+ + C +C+++S ++ +H KHSK
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHSK 28
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 28.2 bits (63), Expect = 0.14
Identities = 7/30 (23%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIH 223
+ +KC C + +L +H R H
Sbjct: 7 QRERRRYKCDECGKSFSHSSDLSKH-RRTH 35
Score = 27.4 bits (61), Expect = 0.30
Identities = 7/33 (21%), Positives = 11/33 (33%), Gaps = 1/33 (3%)
Query: 283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS 315
+ +KC C + L H R H+
Sbjct: 5 WQQRERRRYKCDECGKSFSHSSDLSKHR-RTHT 36
Score = 25.9 bits (57), Expect = 0.88
Identities = 7/34 (20%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 103 QRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHS 136
+ + R + C+ C D++ H R H+
Sbjct: 4 EWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHT 36
Score = 25.5 bits (56), Expect = 1.3
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 71 RHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHT 107
R +R +C C +FS + DL KH +R HT
Sbjct: 2 RSE-WQQRERRRYKCDECGKSFSHSSDLSKH-RRTHT 36
Score = 23.6 bits (51), Expect = 6.5
Identities = 8/29 (27%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYG 287
+ + C+ C F D+ H R H G
Sbjct: 10 RRRYKCDECGKSFSHSSDLSKHR-RTHTG 37
Score = 23.2 bits (50), Expect = 9.4
Identities = 7/35 (20%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 133 RKHSKGDKPHKCTICESTYLTKVELKNHILKIHQG 167
+ + +KC C ++ +L H + H G
Sbjct: 5 WQQR-ERRRYKCDECGKSFSHSSDLSKH-RRTHTG 37
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 28.1 bits (63), Expect = 0.16
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 84 ECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNF 116
C +F+ LK+H + H++ R + C F
Sbjct: 5 PEPACGKSFNFKKHLKEH-MKLHSDTRDYICEF 36
Score = 26.6 bits (59), Expect = 0.59
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 262 FTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCSF 295
F+C C F K +K HM + H + + C F
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICEF 36
Score = 25.8 bits (57), Expect = 0.99
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 171 FQCS--FCDRRFYFKNECTKHYLEHHTNEKPFKC 202
F C C + F FK +H + H++ + + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYIC 34
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 28.2 bits (63), Expect = 0.17
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIH 223
T KPF+C C R+ L H + H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHR-KRH 34
Score = 27.4 bits (61), Expect = 0.24
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 282 SRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIH 314
+R G+KPF+C C+ + L H + H
Sbjct: 3 TRGSTGIKPFQCPDCDRSFSRSDHLALHR-KRH 34
Score = 25.1 bits (55), Expect = 2.0
Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 103 QRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKH 135
R T +PF C CD + H ++H
Sbjct: 3 TRGSTGIKPFQCPDCDRSFSRSDHLALH-RKRH 34
Score = 23.2 bits (50), Expect = 8.3
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 259 DKPFTCEHCDSKFCKKYDMKMHM 281
KPF C CD F + + +H
Sbjct: 9 IKPFQCPDCDRSFSRSDHLALHR 31
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 28.5 bits (63), Expect = 0.19
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIH 314
DK + C+ C F K HM H GL+P+ C C K K L H+ +IH
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHM-KIH 53
Score = 27.0 bits (59), Expect = 0.61
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 289 KPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQT 340
K + C C T K H++ + Y CG C L+ H++
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52
Score = 24.3 bits (52), Expect = 5.6
Identities = 9/53 (16%), Positives = 15/53 (28%), Gaps = 4/53 (7%)
Query: 197 EKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSH 249
+K + C C + +H+ Y C C + L H
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP---YGCGVCGKKFKMKHHLVGH 49
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 27.3 bits (61), Expect = 0.29
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 289 KPFKCSFCEYKCTTKFGLKSHVTRIHSNQK 318
K F C C + L H+ + H N+K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHI-KTHQNKK 29
Score = 25.8 bits (57), Expect = 1.0
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 198 KPFKCTLCSYKAKRNFELKQHILRIH 223
K F C C + R+ L +HI + H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHI-KTH 25
Score = 25.4 bits (56), Expect = 1.2
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLK 289
K F C C +F + + H+ + H K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHI-KTHQNKK 29
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 26.9 bits (59), Expect = 0.36
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 197 EKPFKCTLCSYKAKRNFELKQHILR 221
E+PFKC +C Y ++ + +L H+
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRS 25
Score = 26.2 bits (57), Expect = 0.73
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 109 DRPFSCNFCDYKSKTKYDITSHSLRKHS 136
+RPF C C Y S+ +T H LR H+
Sbjct: 1 ERPFKCQICPYASRNSSQLTVH-LRSHT 27
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 26.9 bits (59), Expect = 0.37
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 198 KPFKCTLCSYKAKRNFELKQHILRIHQD 225
+PFKC CS+ K+ L +H+ + H D
Sbjct: 1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD 28
Score = 25.0 bits (54), Expect = 1.5
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 289 KPFKCSFCEYKCTTKFGLKSHVTRIHSN 316
+PFKC++C + L H+ + H +
Sbjct: 1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD 28
Score = 24.6 bits (53), Expect = 2.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 110 RPFSCNFCDYKSKTKYDITSHSLRKH 135
RPF CN+C + +K +++ H + H
Sbjct: 1 RPFKCNYCSFDTKQPSNLSKHMKKFH 26
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 26.8 bits (60), Expect = 0.40
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 197 EKPFKCTLCSYKAKRNFELKQHILRIH 223
+KPF+C +C R+ L HI R H
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHI-RTH 26
Score = 24.5 bits (54), Expect = 2.4
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYG 287
KPF C C F + + H+ R H G
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHI-RTHTG 28
Score = 24.1 bits (53), Expect = 3.8
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 289 KPFKCSFCEYKCTTKFGLKSHVTRIHS 315
KPF+C C + L +H+ R H+
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHI-RTHT 27
Score = 23.3 bits (51), Expect = 5.6
Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Query: 84 ECSLCDSTFSDNMDLKKHIQRKHT 107
+C +C FS + L H R HT
Sbjct: 5 QCRICMRNFSRSDHLTTH-IRTHT 27
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 26.8 bits (60), Expect = 0.43
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 289 KPFKCSFCEYKCTTKFGLKSHVTRIHSNQK 318
+ F C C + LK H R H+N+K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEK 29
Score = 26.0 bits (58), Expect = 0.81
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 198 KPFKCTLCSYKAKRNFELKQHILRIH 223
+ F C +C+ R LK+H R H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHY-RSH 25
Score = 25.7 bits (57), Expect = 0.94
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLK 289
+ F CE C F ++ +K H R+H K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEK 29
Score = 23.4 bits (51), Expect = 5.8
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 84 ECSLCDSTFSDNMDLKKHIQRKHTNDR 110
C +C F+ LK+H R HTN++
Sbjct: 4 VCEVCTRAFARQEHLKRH-YRSHTNEK 29
>d2ddza1 d.104.1.4 (A:3-190) Uncharacterized protein PH0223
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 188
Score = 29.4 bits (66), Expect = 0.49
Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 8/67 (11%)
Query: 21 DDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQ 80
DD ++I E F + + L S QKL L E N I R I++
Sbjct: 64 DDMVHYIL-------ELFWHPDILLASSL-QKLLIARLVELLWNYGIEASRRGDDIYVNG 115
Query: 81 RNLECSL 87
R L S+
Sbjct: 116 RKLSISI 122
>d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId:
562]}
Length = 312
Score = 28.4 bits (62), Expect = 1.5
Identities = 14/170 (8%), Positives = 37/170 (21%), Gaps = 10/170 (5%)
Query: 178 RRFYFKNECTKHYL-EHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIE-------- 228
R+ + + L T P C C ++ L+ L + +E
Sbjct: 29 RQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAA 88
Query: 229 -AEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYG 287
+ C + + C + + + +Y
Sbjct: 89 GSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYN 148
Query: 288 LKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEH 337
T + + + + C+ + ++
Sbjct: 149 HNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKD 198
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 26
Score = 24.8 bits (53), Expect = 2.3
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 141 PHKCTICESTYLTKVELKNHILKIH 165
P+KC+ C ++ K +L++H++K+H
Sbjct: 2 PYKCSSCSQQFMQKKDLQSHMIKLH 26
Score = 23.2 bits (49), Expect = 7.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 261 PFTCEHCDSKFCKKYDMKMHMSRAH 285
P+ C C +F +K D++ HM + H
Sbjct: 2 PYKCSSCSQQFMQKKDLQSHMIKLH 26
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 24.7 bits (53), Expect = 2.4
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 198 KPFKCTLCSYKAKRNFELKQHILRIHQD 225
KP+KC C Y A + L +H LRIH D
Sbjct: 2 KPYKCKTCDYAAADSSSLNKH-LRIHSD 28
Score = 23.6 bits (50), Expect = 6.3
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 288 LKPFKCSFCEYKCTTKFGLKSHVTRIHSN 316
+KP+KC C+Y L H+ RIHS+
Sbjct: 1 VKPYKCKTCDYAAADSSSLNKHL-RIHSD 28
>d2ghfa1 g.37.1.1 (A:45-102) Zinc fingers and homeoboxes protein
1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 25.2 bits (55), Expect = 2.9
Identities = 4/20 (20%), Positives = 13/20 (65%)
Query: 25 NFICILCNYHAENFENIYLH 44
+++C+ CN+ + ++ + H
Sbjct: 6 SYVCVECNFLTKRYDALSEH 25
Score = 23.7 bits (51), Expect = 8.8
Identities = 10/27 (37%), Positives = 10/27 (37%)
Query: 316 NQKYFCGSCNFSCTSNTDLLEHVQTNH 342
N Y C CNF L EH H
Sbjct: 4 NSSYVCVECNFLTKRYDALSEHNLKYH 30
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 25.4 bits (56), Expect = 3.1
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 5/34 (14%)
Query: 257 DEDKP----FTCEHCDSKFCKKYDMKMHM-SRAH 285
D D P C C F ++K H S+ H
Sbjct: 7 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSKDH 40
>d2tnfa_ b.22.1.1 (A:) Tumor necrosis factor (TNF) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 148
Score = 26.5 bits (58), Expect = 3.2
Identities = 11/75 (14%), Positives = 21/75 (28%)
Query: 212 NFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKF 271
+LK + L + D + Y +L +H + A +
Sbjct: 32 GMDLKDNQLVVPADGLYLVYSQVLFKGQGCPDYVLLTHTVSRFAISYQEKVNLLSAVKSP 91
Query: 272 CKKYDMKMHMSRAHY 286
C K + + Y
Sbjct: 92 CPKDTPEGAELKPWY 106
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 24.0 bits (52), Expect = 3.3
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 197 EKPFKCTLCSYKAKRNFELKQHILRIHQ 224
EKPF C +C K R+ E K+H +IH
Sbjct: 1 EKPFACDICGRKFARSDERKRHT-KIHL 27
Score = 23.6 bits (51), Expect = 5.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 259 DKPFTCEHCDSKFCKKYDMKMHM 281
+KPF C+ C KF + + K H
Sbjct: 1 EKPFACDICGRKFARSDERKRHT 23
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 130
Score = 26.1 bits (57), Expect = 4.2
Identities = 13/58 (22%), Positives = 17/58 (29%), Gaps = 6/58 (10%)
Query: 309 HVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSSRDFIIHSFVKNAMYHC 366
T IH + + T+ D V I G S DF + YH
Sbjct: 59 KSTSIHWH------GFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHS 110
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.9 bits (51), Expect = 4.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 262 FTCEHCDSKFCKKYDMKMHMSRAH 285
F C HCD+ +K D+ +H+ + H
Sbjct: 3 FHCPHCDTVIARKSDLGVHLRKQH 26
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 23.5 bits (50), Expect = 6.2
Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 80 QRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFS 113
++ + C +C F D L +H + H+ ++P+S
Sbjct: 3 RKQVACEICGKIFRDVYHLNRH-KLSHSGEKPYS 35
>d2avue1 e.64.1.1 (E:5-160) Flagellar transcriptional activator FlhC
{Escherichia coli [TaxId: 562]}
Length = 156
Score = 25.9 bits (57), Expect = 6.6
Identities = 9/35 (25%), Positives = 11/35 (31%), Gaps = 9/35 (25%)
Query: 142 HKCTICESTYLTKVELKNHILKIHQGQTRFQCSFC 176
C C ++T HQ F CS C
Sbjct: 131 SSCNCCGGNFITHA---------HQPVGSFACSLC 156
>d1r9ja2 c.36.1.10 (A:1-336) Transketolase (TK), PP module
{Leishmania mexicana mexicana [TaxId: 44270]}
Length = 336
Score = 26.4 bits (57), Expect = 6.7
Identities = 12/106 (11%), Positives = 21/106 (19%), Gaps = 5/106 (4%)
Query: 189 HYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCT-----YCDYICSSR 243
Y H + H R +E + +
Sbjct: 71 QYALLHMAGYNLTMDDLKGFRQDGSRTPGHPERFVTPGVEVTTGPLGQGIANAVGLAIAE 130
Query: 244 TILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLK 289
L + N+ N D D + + H L+
Sbjct: 131 AHLAATFNRPGYNIVDHYTYVYCGDGCLMEGVCQEALSLAGHLALE 176
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 24.6 bits (53), Expect = 6.9
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 167 GQTRFQCSFCDRRFYFKNECTKHYLEHH 194
+ +QC CD + E T H H+
Sbjct: 15 QNSTYQCKHCDSKLQSTAELTSHLNIHN 42
>d1xfja_ d.194.1.2 (A:) Hypothetical protein CC0490 {Caulobacter
crescentus [TaxId: 155892]}
Length = 256
Score = 25.6 bits (55), Expect = 9.7
Identities = 3/99 (3%), Positives = 14/99 (14%), Gaps = 3/99 (3%)
Query: 142 HKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKP-- 199
+ + + + + E +
Sbjct: 130 WRGALDGVVQSAVDRMVELGASPANITGVVGPCIGPKSYEVGLEFLHRFEADCPGSGRFF 189
Query: 200 -FKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCD 237
+ + + + E T +
Sbjct: 190 KPGASEDKRFFDLPAFVLDRLATAGVERREWVGRDTRAE 228
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.326 0.136 0.442
Gapped
Lambda K H
0.267 0.0562 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,446,760
Number of extensions: 72027
Number of successful extensions: 754
Number of sequences better than 10.0: 1
Number of HSP's gapped: 727
Number of HSP's successfully gapped: 288
Length of query: 373
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 286
Effective length of database: 1,213,086
Effective search space: 346942596
Effective search space used: 346942596
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 54 (25.0 bits)