Query psy1009
Match_columns 129
No_of_seqs 134 out of 178
Neff 4.2
Searched_HMMs 13730
Date Fri Aug 16 17:38:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1009.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1009hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d4bcla_ b.75.1.1 (A:) Bacterio 46.8 1.7 0.00013 34.4 -0.3 15 71-85 276-290 (359)
2 d1qsaa1 a.118.5.1 (A:1-450) 70 33.0 57 0.0042 24.2 6.7 40 43-86 4-43 (450)
3 d1juga_ d.2.1.2 (A:) Lysozyme 22.8 4.8 0.00035 27.6 -1.3 7 88-94 3-9 (125)
4 d1toaa_ c.92.2.2 (A:) Periplas 21.3 27 0.002 24.7 2.6 66 23-88 113-178 (277)
5 d1lmqa_ d.2.1.2 (A:) Lysozyme 20.2 5.8 0.00042 27.3 -1.3 8 113-120 83-90 (129)
6 d2nwdx1 d.2.1.2 (X:1-130) Lyso 19.4 6.2 0.00045 27.0 -1.3 7 88-94 3-9 (130)
7 d1b9oa_ d.2.1.2 (A:) alpha-Lac 17.9 7 0.00051 26.6 -1.3 7 88-94 3-9 (123)
8 d1qqya_ d.2.1.2 (A:) Lysozyme 17.3 7.4 0.00054 26.5 -1.3 7 88-94 4-10 (130)
9 d1gd6a_ d.2.1.2 (A:) Lysozyme 16.6 7.8 0.00057 26.1 -1.3 7 88-94 3-9 (119)
10 d1hfxa_ d.2.1.2 (A:) alpha-Lac 16.4 8 0.00058 26.1 -1.3 7 88-94 3-9 (123)
No 1
>d4bcla_ b.75.1.1 (A:) Bacteriochlorophyll A protein {Prosthecochloris aestuarii, strain 2k [TaxId: 1102]}
Probab=46.84 E-value=1.7 Score=34.37 Aligned_cols=15 Identities=33% Similarity=0.594 Sum_probs=12.5
Q ss_pred hhhhhhcCCchHHHH
Q psy1009 71 HCALCFRHPLFPLLA 85 (129)
Q Consensus 71 ~~~~i~~hplfpll~ 85 (129)
.+++|.+|||.||.-
T Consensus 276 g~rrilnhpliplvH 290 (359)
T d4bcla_ 276 GLRRILNHPLIPLVH 290 (359)
T ss_dssp TEEEECCCCHHHHHH
T ss_pred CchhhhcCCccceee
Confidence 357899999999964
No 2
>d1qsaa1 a.118.5.1 (A:1-450) 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain {Escherichia coli [TaxId: 562]}
Probab=33.05 E-value=57 Score=24.15 Aligned_cols=40 Identities=13% Similarity=0.196 Sum_probs=25.0
Q ss_pred HHhhHHHHHHHHhhccchhhhhhhhhhhhhhhhhcCCchHHHHH
Q psy1009 43 AQNRNEWRRRTKLLLPTNRQIFQLISSVHCALCFRHPLFPLLAL 86 (129)
Q Consensus 43 A~DRe~WR~lv~a~~P~~~qi~~~~~~~~~~~i~~hplfpll~l 86 (129)
.++|..-...+.+....+.+.+. .-+..+-.|||.|.|..
T Consensus 4 ~~~r~~y~~a~~a~~~~~~~~~~----~~~~~L~dypL~pYl~~ 43 (450)
T d1qsaa1 4 DEQRSRYAQIKQAWDNRQMDVVE----QMMPGLKDYPLYPYLEY 43 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHH----HHSGGGTTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHH----HHHhhhcCCCCHHHHHH
Confidence 45666666666666555544432 33455668999999854
No 3
>d1juga_ d.2.1.2 (A:) Lysozyme {Australian echidna (Tachyglossus aculeatus) [TaxId: 9261]}
Probab=22.78 E-value=4.8 Score=27.65 Aligned_cols=7 Identities=43% Similarity=0.577 Sum_probs=3.1
Q ss_pred HHHhhhh
Q psy1009 88 FEKCELA 94 (129)
Q Consensus 88 fekce~a 94 (129)
|++||||
T Consensus 3 ~~rCela 9 (125)
T d1juga_ 3 LKKQELC 9 (125)
T ss_dssp CCHHHHH
T ss_pred ccHHHHH
Confidence 3444444
No 4
>d1toaa_ c.92.2.2 (A:) Periplasmic zinc binding protein TroA {Treponema pallidum [TaxId: 160]}
Probab=21.27 E-value=27 Score=24.68 Aligned_cols=66 Identities=12% Similarity=0.110 Sum_probs=41.8
Q ss_pred cHHHHHHHhccCChHHHHHHHHhhHHHHHHHHhhccchhhhhhhhhhhhhhhhhcCCchHHHHHHH
Q psy1009 23 YIRDVETAMGYQNYMELKRLAQNRNEWRRRTKLLLPTNRQIFQLISSVHCALCFRHPLFPLLALIF 88 (129)
Q Consensus 23 W~D~Vk~Dl~~~~~~~~kelA~DRe~WR~lv~a~~P~~~qi~~~~~~~~~~~i~~hplfpll~llf 88 (129)
+.+.|...|.....++-.....+-+++..-+......-...+.......|..|-.||-|.-++-=|
T Consensus 113 ~a~~I~~~L~~~dP~~~~~y~~n~~~~~~~L~~l~~~~~~~~~~~~~~~~~~v~~H~a~~Yf~~~~ 178 (277)
T d1toaa_ 113 SVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAY 178 (277)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccceEEEEeccchhhHHHhc
Confidence 345566666656666655566666666666666555444444444556677889999999776444
No 5
>d1lmqa_ d.2.1.2 (A:) Lysozyme {Rainbow trout (Oncorhynchus mykiss) [TaxId: 8022]}
Probab=20.22 E-value=5.8 Score=27.26 Aligned_cols=8 Identities=25% Similarity=0.609 Sum_probs=3.5
Q ss_pred chHHHHHH
Q psy1009 113 SFNEDIAV 120 (129)
Q Consensus 113 sf~~d~~~ 120 (129)
=.++||..
T Consensus 83 Ll~ddI~d 90 (129)
T d1lmqa_ 83 LLTDDLTV 90 (129)
T ss_dssp GSSSSCHH
T ss_pred HcCCCcHH
Confidence 34445543
No 6
>d2nwdx1 d.2.1.2 (X:1-130) Lysozyme {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.41 E-value=6.2 Score=26.97 Aligned_cols=7 Identities=86% Similarity=1.654 Sum_probs=4.0
Q ss_pred HHHhhhh
Q psy1009 88 FEKCELA 94 (129)
Q Consensus 88 fekce~a 94 (129)
|.+||||
T Consensus 3 ~~rCeLA 9 (130)
T d2nwdx1 3 FERCELA 9 (130)
T ss_dssp CCHHHHH
T ss_pred ccHhHHH
Confidence 4556555
No 7
>d1b9oa_ d.2.1.2 (A:) alpha-Lactalbumin {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.86 E-value=7 Score=26.61 Aligned_cols=7 Identities=71% Similarity=1.440 Sum_probs=3.2
Q ss_pred HHHhhhh
Q psy1009 88 FEKCELA 94 (129)
Q Consensus 88 fekce~a 94 (129)
|++||||
T Consensus 3 ~~rCeLA 9 (123)
T d1b9oa_ 3 FTKCELS 9 (123)
T ss_dssp CCHHHHH
T ss_pred CcHhHHH
Confidence 3444444
No 8
>d1qqya_ d.2.1.2 (A:) Lysozyme {Dog (Canis familiaris), milk [TaxId: 9615]}
Probab=17.27 E-value=7.4 Score=26.54 Aligned_cols=7 Identities=86% Similarity=1.516 Sum_probs=3.7
Q ss_pred HHHhhhh
Q psy1009 88 FEKCELA 94 (129)
Q Consensus 88 fekce~a 94 (129)
|++||||
T Consensus 4 ~~rCeLA 10 (130)
T d1qqya_ 4 FSKCELA 10 (130)
T ss_dssp CCHHHHH
T ss_pred ccHhHHH
Confidence 4555554
No 9
>d1gd6a_ d.2.1.2 (A:) Lysozyme {Silkworm (Bombyx mori) [TaxId: 7091]}
Probab=16.61 E-value=7.8 Score=26.08 Aligned_cols=7 Identities=43% Similarity=1.160 Sum_probs=3.2
Q ss_pred HHHhhhh
Q psy1009 88 FEKCELA 94 (129)
Q Consensus 88 fekce~a 94 (129)
|++||||
T Consensus 3 ~~rCeLa 9 (119)
T d1gd6a_ 3 FTRCGLV 9 (119)
T ss_dssp CCHHHHH
T ss_pred ccHHHHH
Confidence 4445444
No 10
>d1hfxa_ d.2.1.2 (A:) alpha-Lactalbumin {Guinea pig (Cavia porcellus) [TaxId: 10141]}
Probab=16.44 E-value=8 Score=26.14 Aligned_cols=7 Identities=43% Similarity=1.032 Sum_probs=3.1
Q ss_pred HHHhhhh
Q psy1009 88 FEKCELA 94 (129)
Q Consensus 88 fekce~a 94 (129)
|++||||
T Consensus 3 ~~rCelA 9 (123)
T d1hfxa_ 3 LTKCALS 9 (123)
T ss_dssp CCHHHHH
T ss_pred CcHhHHH
Confidence 3444444
Done!