RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy10090
(395 letters)
>gnl|CDD|238818 cd01640, IPPase, IPPase; Inositol polyphosphate-1-phosphatase, a
member of the Mg++ dependent family of inositol
monophosphatase-like domains, hydrolyzes the 1' position
phosphate from inositol 1,3,4-trisphosphate and inositol
1,4-bisphosphate. Members in this group may also exhibit
3'-phosphoadenosine 5'-phosphate phosphatase activity,
and they all appear to be inhibited by lithium. IPPase
is one of the proposed targets of Li+ therapy in
manic-depressive illness.
Length = 293
Score = 172 bits (439), Expect = 3e-51
Identities = 74/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 229 DKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDVDE 288
+ NDF T ADR ++ I SL FP + IIGEE E + E D+DE
Sbjct: 35 KEGANDFKTLADRLSQRVIKHSLQKQFPKLKIIGEEDNEF------ENQEDESRDVDLDE 88
Query: 289 AILAKTCPPSLQTLAEKDIVVWVDPLDGTREYTQGFLDHVTVLIGISAHGKALAGVIHQP 348
IL ++CP + L E+D+ VWVDPLD T+EYT+G L++VTVLIG++ GK +AGVIHQP
Sbjct: 89 EILEESCPSPSKDLPEEDLGVWVDPLDATQEYTEGLLEYVTVLIGVAVKGKPIAGVIHQP 148
Query: 349 FYNYQNKESGAQLGRTIWGIQDLGVGG-YTPNPPPANKRIITTTR 392
FY +GA LGRTIWG+ LG A K I++T+
Sbjct: 149 FYEKTA-GAGAWLGRTIWGLSGLGAHSSDFKEREDAGKIIVSTSH 192
Score = 63.5 bits (155), Expect = 2e-11
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 148 DKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDVDE 207
+ NDF T ADR ++ I SL FP + IIGEE E + E D+DE
Sbjct: 35 KEGANDFKTLADRLSQRVIKHSLQKQFPKLKIIGEEDNEF------ENQEDESRDVDLDE 88
Query: 208 AILAKTCPPSLQTLAEKDIV 227
IL ++CP + L E+D+
Sbjct: 89 EILEESCPSPSKDLPEEDLG 108
>gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases.
C-terminal domain of fatty acyl CoA reductases, a family
of SDR-like proteins. SDRs or short-chain
dehydrogenases/reductases are Rossmann-fold
NAD(P)H-binding proteins. Many proteins in this FAR_C
family may function as fatty acyl-CoA reductases (FARs),
acting on medium and long chain fatty acids, and have
been reported to be involved in diverse processes such
as the biosynthesis of insect pheromones, plant
cuticular wax production, and mammalian wax
biosynthesis. In Arabidopsis thaliana, proteins with
this particular architecture have also been identified
as the MALE STERILITY 2 (MS2) gene product, which is
implicated in male gametogenesis. Mutations in MS2
inhibit the synthesis of exine (sporopollenin),
rendering plants unable to reduce pollen wall fatty
acids to corresponding alcohols. The function of this
C-terminal domain is unclear.
Length = 92
Score = 121 bits (305), Expect = 5e-34
Identities = 39/90 (43%), Positives = 58/90 (64%)
Query: 35 FYHYLFAYIVDFCAPLTKSKLRLVPIYQRIDKVMDVLEPFSTNEWSFINENIHTLWDSLS 94
F H L AY++D L K RL+ +Y++I K++D+LE F+TNEW F N+N LW+ LS
Sbjct: 1 FLHLLPAYLLDLLLRLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLS 60
Query: 95 PQEQAKFPFNIRDLDWTKYLETYVKGILVY 124
+++ F F+IR +DW Y E Y+ G+ Y
Sbjct: 61 EEDRELFNFDIRSIDWDDYFENYIPGLRKY 90
>gnl|CDD|111859 pfam03015, Sterile, Male sterility protein. This family represents
the C-terminal region of the male sterility protein in a
number of arabidopsis and drosophila. A sequence-related
jojoba acyl CoA reductase is also included.
Length = 94
Score = 94.2 bits (235), Expect = 8e-24
Identities = 38/94 (40%), Positives = 58/94 (61%)
Query: 35 FYHYLFAYIVDFCAPLTKSKLRLVPIYQRIDKVMDVLEPFSTNEWSFINENIHTLWDSLS 94
FYH L AY +D L K RLV +Y++I K ++VL+PFS NEW F N+N L + +S
Sbjct: 1 FYHTLPAYFLDLLLRLYGQKPRLVKLYRKIHKGLEVLQPFSLNEWIFDNKNTRELREKMS 60
Query: 95 PQEQAKFPFNIRDLDWTKYLETYVKGILVYQLQD 128
+++ F F++ LDW +Y ++GI Y L++
Sbjct: 61 EEDKKLFNFDMESLDWDEYFRNAIRGIRKYLLKE 94
>gnl|CDD|215930 pfam00459, Inositol_P, Inositol monophosphatase family.
Length = 269
Score = 92.8 bits (231), Expect = 2e-21
Identities = 43/175 (24%), Positives = 65/175 (37%), Gaps = 47/175 (26%)
Query: 227 VGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDV 286
ND T AD++AE I+ +LA+LFP IIGEE G T D P
Sbjct: 32 EKTSGSNDLVTAADKAAEELILEALAALFPGHPIIGEETGAIGGTELTDDGP-------- 83
Query: 287 DEAILAKTCPPSLQTLAEKDIVVWVDPLDGTREYTQGFLDHVTVLIGISAHGKALAGVIH 346
+DP+DGT+ + +G V IG+ +G+ + GV++
Sbjct: 84 ---------------------TWIIDPIDGTKNFIRGI-PQFAVSIGLLVNGEPVLGVVY 121
Query: 347 QPFYNYQNKESGAQLGRTIWGIQDLG--VGGY----TPNPPPANKRIITTTRYES 395
P LG + G + G + P +N ++T S
Sbjct: 122 APA-----------LGELYSAAKGKGAFLNGQKLPVSGAPLLSNALLVTLFGSSS 165
Score = 59.3 bits (144), Expect = 6e-10
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 122 LVYQLQDKLDPETRKYARRRYKRIQGDKSKNDFSTEADRSAETCIISSLASLFPSITIIG 181
+ +L K R+ + ND T AD++AE I+ +LA+LFP IIG
Sbjct: 8 IAVELARKAGEVLREAFSNDLTVEEKTSGSNDLVTAADKAAEELILEALAALFPGHPIIG 67
Query: 182 EEGRESGHTHKMCDVPPEWII 202
EE G T D P WII
Sbjct: 68 EETGAIGGTELTDD-GPTWII 87
>gnl|CDD|223559 COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related
enzymes of inositol monophosphatase family [Carbohydrate
transport and metabolism].
Length = 260
Score = 80.1 bits (198), Expect = 4e-17
Identities = 44/169 (26%), Positives = 60/169 (35%), Gaps = 43/169 (25%)
Query: 199 EWIISDVDEAILAKTCPPSLQTLAEKDIVGDKSKNDFSTEADRSAETCIISSLASLFPSI 258
IL P + L ++ KS D TEAD++AE I + L + FP
Sbjct: 9 LRAARKAGALIL-----PLFRELDAVEVEVKKSDGDPVTEADKAAERIIRARLRAAFPDH 63
Query: 259 TIIGEEGRESGHTHKMCDVPPEWIISDVDEAILAKTCPPSLQTLAEKDIVVWV-DPLDGT 317
I+GEE + L D VWV DP+DGT
Sbjct: 64 GILGEESGGA---------------------------------LGGGDEYVWVIDPIDGT 90
Query: 318 REYTQGFLDHVTVLIGISAHGKALAGVIHQPFYN---YQNKESGAQLGR 363
+ +G V I + G+ +AGVI+ P K GA L
Sbjct: 91 TNFVRGI-PFFAVSIALVEDGEPVAGVIYDPATGELYTAAKGKGAYLNG 138
Score = 47.0 bits (112), Expect = 6e-06
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 126 LQDKLDPETRKYARRRYK-RIQGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEG 184
K R ++ KS D TEAD++AE I + L + FP I+GEE
Sbjct: 11 AARKAGALILPLFRELDAVEVEVKKSDGDPVTEADKAAERIIRARLRAAFPDHGILGEES 70
>gnl|CDD|238815 cd01637, IMPase_like, Inositol-monophosphatase-like domains. This
family of phosphatases is dependent on bivalent metal
ions such as Mg++, and many members are inhibited by Li+
(which is thought to displace a bivalent ion in the
active site). Substrates include
fructose-1,6-bisphosphate, inositol poly- and
monophosphates, PAP and PAPS,
sedoheptulose-1,7-bisphosphate and probably others.
Length = 238
Score = 73.1 bits (180), Expect = 7e-15
Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 32/128 (25%)
Query: 222 AEKDIVGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEW 281
E + K D TEAD +AE I+ L +LFP I+GEEG SG
Sbjct: 21 EELTVETKKGDGDLVTEADLAAEELIVDVLKALFPDDGILGEEGGGSG------------ 68
Query: 282 IISDVDEAILAKTCPPSLQTLAEKDIVVWVDPLDGTREYTQGFLDHVTVLIGISAHGKAL 341
+++ V +DP+DGT + G L + V I + GK +
Sbjct: 69 -------------------NVSDGGRVWVIDPIDGTTNFVAG-LPNFAVSIALYEDGKPV 108
Query: 342 AGVIHQPF 349
GVI+ P
Sbjct: 109 LGVIYDPM 116
Score = 47.3 bits (113), Expect = 4e-06
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 138 ARRRYKRIQGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESG 188
A ++ K D TEAD +AE I+ L +LFP I+GEEG SG
Sbjct: 18 AFGEELTVETKKGDGDLVTEADLAAEELIVDVLKALFPDDGILGEEGGGSG 68
>gnl|CDD|238817 cd01639, IMPase, IMPase, inositol monophosphatase and related
domains. A family of Mg++ dependent phosphatases,
inhibited by lithium, many of which may act on inositol
monophosphate substrate. They dephosphorylate inositol
phosphate to generate inositol, which may be recycled
into inositol lipids; in eukaryotes IMPase plays a vital
role in intracellular signaling. IMPase is one of the
proposed targets of Li+ therapy in manic-depressive
illness. This family contains some bacterial members of
the inositol monophosphatase family classified as
SuhB-like. E. coli SuhB has been suggested to
participate in posstranscriptional control of gene
expression, and its inositol monophosphatase activity
doesn't appear to be sufficient for its cellular
function. It has been proposed, that SuhB plays a role
in the biosynthesis of phosphatidylinositol in
mycobacteria.
Length = 244
Score = 73.0 bits (180), Expect = 1e-14
Identities = 34/121 (28%), Positives = 46/121 (38%), Gaps = 33/121 (27%)
Query: 231 SKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDVDEAI 290
S D TE D++ E II L +P +GEE +G P WII
Sbjct: 32 SPVDLVTEVDKAVEKLIIEILKKAYPDHGFLGEESGAAGGLTD----EPTWII------- 80
Query: 291 LAKTCPPSLQTLAEKDIVVWVDPLDGTREYTQGFLDHVTVLIGISAHGKALAGVIHQPFY 350
DPLDGT + GF H V I ++ G+ + GV++ P
Sbjct: 81 ---------------------DPLDGTTNFVHGF-PHFAVSIALAVKGEPVVGVVYDPIR 118
Query: 351 N 351
N
Sbjct: 119 N 119
Score = 56.4 bits (137), Expect = 4e-09
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 135 RKYARRRYKRIQGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMC 194
+ + ++ S D TE D++ E II L +P +GEE +G
Sbjct: 17 LEAYEKLGLNVEEKGSPVDLVTEVDKAVEKLIIEILKKAYPDHGFLGEESGAAGGLTD-- 74
Query: 195 DVPPEWII 202
P WII
Sbjct: 75 --EPTWII 80
>gnl|CDD|238819 cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of
Mg++ dependend phosphatases, related to inositol
monophosphatases. These enzymes may dephosphorylate
fructose-1,6-bisphosphate, inositol monophospate,
3'-phosphoadenosine-5'-phosphate, or similar
substrates.
Length = 248
Score = 68.0 bits (167), Expect = 5e-13
Identities = 42/154 (27%), Positives = 59/154 (38%), Gaps = 49/154 (31%)
Query: 231 SKNDFS--TEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDVDE 288
+K DFS TEADR+AE + +A+ FP I+GEE G D W++
Sbjct: 28 TKADFSPVTEADRAAEAAMRELIAAAFPDHGILGEEFGNEG-----GDAGYVWVL----- 77
Query: 289 AILAKTCPPSLQTLAEKDIVVWVDPLDGTREYTQGFLDHVTVLIGISAHGKALAGVIHQP 348
DP+DGT+ + +G L LI + G+ + GVI QP
Sbjct: 78 -----------------------DPIDGTKSFIRG-LPVWGTLIALLHDGRPVLGVIDQP 113
Query: 349 FYNYQNKESGAQLGRTIWGIQDLG--VGGYTPNP 380
LG G + G + G P
Sbjct: 114 A-----------LGERWIGARGGGTFLNGAGGRP 136
Score = 53.0 bits (128), Expect = 5e-08
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 122 LVYQLQDKLDPETRKYARRRYKRIQGDKSKNDFS--TEADRSAETCIISSLASLFPSITI 179
+L D T Y R R +Q + +K DFS TEADR+AE + +A+ FP I
Sbjct: 4 FALELADAAGQITLPYFRTR---LQVE-TKADFSPVTEADRAAEAAMRELIAAAFPDHGI 59
Query: 180 IGEEGRESGHTHKMCDVPPEWIISDVD 206
+GEE G D W++ +D
Sbjct: 60 LGEEFGNEG-----GDAGYVWVLDPID 81
>gnl|CDD|238816 cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS)
3'-phosphatase, is a bacterial member of the inositol
monophosphatase family. It has been proposed that CysQ
helps control intracellular levels of PAPS, which is an
intermediate in cysteine biosynthesis (a principal route
of sulfur assimilation).
Length = 242
Score = 64.9 bits (159), Expect = 5e-12
Identities = 34/148 (22%), Positives = 51/148 (34%), Gaps = 45/148 (30%)
Query: 227 VGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDV 286
V K T AD +A I+ LA+L P I ++ EE + +
Sbjct: 26 VERKEDGSPVTAADLAANAFIVEGLAALRPDIPVLSEESADDPLRL-----GWDR----- 75
Query: 287 DEAILAKTCPPSLQTLAEKDIVVW-VDPLDGTREYTQGFLDHVTVLIGISAHGKALAGVI 345
W VDPLDGTRE+ +G V I + G+ + GV+
Sbjct: 76 ----------------------FWLVDPLDGTREFIKG-NGEFAVNIALVEDGRPVLGVV 112
Query: 346 HQPFYNYQNKESGAQLGRTIWGIQDLGV 373
+ P LG + ++ G
Sbjct: 113 YAP-----------ALGELYYALRGGGA 129
Score = 40.7 bits (96), Expect = 7e-04
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 139 RRRYKRIQGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEG 184
R ++ K T AD +A I+ LA+L P I ++ EE
Sbjct: 20 YRGGFTVE-RKEDGSPVTAADLAANAFIVEGLAALRPDIPVLSEES 64
>gnl|CDD|238814 cd01636, FIG, FIG, FBPase/IMPase/glpX-like domain. A superfamily of
metal-dependent phosphatases with various substrates.
Fructose-1,6-bisphospatase (both the major and the
glpX-encoded variant) hydrolyze
fructose-1,6,-bisphosphate to fructose-6-phosphate in
gluconeogenesis. Inositol-monophosphatases and inositol
polyphosphatases play vital roles in eukaryotic
signalling, as they participate in metabolizing the
messenger molecule Inositol-1,4,5-triphosphate. Many of
these enzymes are inhibited by Li+.
Length = 184
Score = 62.4 bits (152), Expect = 1e-11
Identities = 29/139 (20%), Positives = 44/139 (31%), Gaps = 34/139 (24%)
Query: 225 DIVGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIIS 284
+ KS ND T AD +AET I + L S FP + I+GEE +
Sbjct: 26 KVKITKSDNDPVTTADVAAETLIRNMLKSSFPDVKIVGEES------------GVAEEVM 73
Query: 285 DVDEAILAKTCPPSLQTLAEKDIVVWVDPLDGTREYTQGFLDHVTVLIGI----SAHGKA 340
+ +DP+DGT+ + G V V+I + +
Sbjct: 74 GRR-----------------DEYTWVIDPIDGTKNFINGL-PFVAVVIAVYVILILAEPS 115
Query: 341 LAGVIHQPFYNYQNKESGA 359
V +
Sbjct: 116 HKRVDEKKAELQLLAVYRI 134
Score = 45.1 bits (107), Expect = 1e-05
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 137 YARRRYKRIQGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEG 184
+ R +++ KS ND T AD +AET I + L S FP + I+GEE
Sbjct: 19 FGRELSGKVKITKSDNDPVTTADVAAETLIRNMLKSSFPDVKIVGEES 66
>gnl|CDD|238775 cd01517, PAP_phosphatase, PAP-phosphatase_like domains.
PAP-phosphatase is a member of the inositol
monophosphatase family, and catalyses the hydrolysis of
3'-phosphoadenosine-5'-phosphate (PAP) to AMP. In
Saccharomyces cerevisiae, HAL2 (MET22) is involved in
methionine biosynthesis and provides increased salt
tolerance when over-expressed. Bacterial members of this
domain family may differ in their substrate specificity
and dephosphorylate different targets, as the substrate
binding site does not appear to be conserved in that
sub-set.
Length = 274
Score = 63.9 bits (156), Expect = 2e-11
Identities = 41/151 (27%), Positives = 54/151 (35%), Gaps = 44/151 (29%)
Query: 211 AKTCPPSLQTLAEKDIVGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGH 270
A P + L D+V KS T AD A+ I ++LA LFPS I+GEE
Sbjct: 13 ASLTLPVFRNLGAGDVVWKKSDKSPVTVADYGAQALITAALARLFPSDPIVGEE------ 66
Query: 271 THKMCDVPPEWIISDVDEAILAKTCPPSLQTLAEKDIVVWV-DPLDGTREYTQGFL--DH 327
D WV DP+DGT+ GFL D
Sbjct: 67 --------------DSAALGRF-----------------WVLDPIDGTK----GFLRGDQ 91
Query: 328 VTVLIGISAHGKALAGVIHQPFYNYQNKESG 358
V + + G+ + GVI P + G
Sbjct: 92 FAVALALIEDGEVVLGVIGCPNLPLDDGGGG 122
Score = 48.1 bits (115), Expect = 2e-06
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 139 RRRYKRIQGDK--SKNDFS--TEADRSAETCIISSLASLFPSITIIGEE 183
GD K+D S T AD A+ I ++LA LFPS I+GEE
Sbjct: 18 PVFRNLGAGDVVWKKSDKSPVTVADYGAQALITAALARLFPSDPIVGEE 66
>gnl|CDD|224139 COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS)
3'-phosphatase [Inorganic ion transport and metabolism].
Length = 276
Score = 60.8 bits (148), Expect = 2e-10
Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 30/122 (24%)
Query: 227 VGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDV 286
V K+ N T AD +A+ I+ L +LFP I ++ EE
Sbjct: 34 VWTKADNSPVTAADLAAQQIILEGLRALFPDIPVVSEE---------------------- 71
Query: 287 DEAILAKTCPPSLQTLAEKDIVVWVDPLDGTREYTQGFLDHVTVLIGISAHGKALAGVIH 346
+ D VDPLDGT+E+ + V I + +G + GV++
Sbjct: 72 -------EEAIDWEERLHWDRFWLVDPLDGTKEFIKR-NGDFAVNIALIENGVPVLGVVY 123
Query: 347 QP 348
P
Sbjct: 124 AP 125
Score = 40.8 bits (96), Expect = 7e-04
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 150 SKNDFS--TEADRSAETCIISSLASLFPSITIIGEE 183
+K D S T AD +A+ I+ L +LFP I ++ EE
Sbjct: 36 TKADNSPVTAADLAAQQIILEGLRALFPDIPVVSEE 71
>gnl|CDD|130398 TIGR01331, bisphos_cysQ, 3'(2'),5'-bisphosphate nucleotidase,
bacterial. Sulfate is incorporated into
3-phosphoadenylylsulfate, PAPS, for utilization in
pathways such as methionine biosynthesis. Transfer of
sulfate from PAPS to an acceptor leaves adenosine
3'-5'-bisphosphate, APS. This model describes a form
found in bacteria of the enzyme 3'(2'),5'-bisphosphate
nucleotidase, which removes the 3'-phosphate from APS to
regenerate AMP and help drive the cycle [Central
intermediary metabolism, Sulfur metabolism].
Length = 249
Score = 58.6 bits (142), Expect = 8e-10
Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 37/135 (27%)
Query: 227 VGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDV 286
V K+ N TEADR+A I+ L +L P I ++ EE D
Sbjct: 26 VAQKADNSPVTEADRAAHRFILEGLRALTPDIPVLSEE-----------DASIPLTPRQT 74
Query: 287 DEAILAKTCPPSLQTLAEKDIVVW-VDPLDGTREYTQGFLDHVTVLIGISAHGKALAGVI 345
+ W VDPLDGT+E+ D TV I + HG + GV+
Sbjct: 75 WQRF-------------------WLVDPLDGTKEFINRNGD-FTVNIALVEHGVPVLGVV 114
Query: 346 HQP-----FYNYQNK 355
+ P ++ K
Sbjct: 115 YAPATGVTYFATAGK 129
Score = 40.1 bits (94), Expect = 0.001
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 149 KSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHT 190
K+ N TEADR+A I+ L +L P I ++ EE T
Sbjct: 29 KADNSPVTEADRAAHRFILEGLRALTPDIPVLSEEDASIPLT 70
>gnl|CDD|213680 TIGR02067, his_9_HisN, histidinol-phosphatase, inositol
monophosphatase family. This subfamily belongs to the
inositol monophosphatase family (pfam00459). The members
of this family consist of no more than one per species
and are found only in species in which histidine is
synthesized de novo but no histidinol phosphatase can be
found in either of the two described families
(TIGR01261, TIGR01856). In at least one species, the
member of this family is found near known histidine
biosynthesis genes. The role as histidinol-phosphatase
wsa first proven in Corynebacterium glutamicum [Amino
acid biosynthesis, Histidine family].
Length = 251
Score = 56.5 bits (137), Expect = 4e-09
Identities = 39/165 (23%), Positives = 53/165 (32%), Gaps = 51/165 (30%)
Query: 225 DIVGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEE--GRESGHTHKMCDVPPEWI 282
+V KS TEADR+AE + +A+ FP I+GEE E G D W+
Sbjct: 25 LVVDKKSDKTPVTEADRAAEEAMRELIAAFFPDHGILGEEFGHNEEG------DAERVWV 78
Query: 283 ISDVDEAILAKTCPPSLQTLAEKDIVVWVDPLDGTREYTQGFLDHVTVLIGISAHGKALA 342
+ DP+DGT+ + +G T LI + G +
Sbjct: 79 L----------------------------DPIDGTKSFIRGVPVWGT-LIALVEGGMPVL 109
Query: 343 GVIHQPFYNYQNKESGAQLGRTIWGIQDLGVGGYTPNPPPANKRI 387
GVI QP G W G
Sbjct: 110 GVIFQPA-----------TGERWWAAGG---GAAFLGGRRLRVSS 140
Score = 38.4 bits (90), Expect = 0.003
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 13/86 (15%)
Query: 125 QLQDKLDPETRKYARRRYKRIQGDKSKNDFS--TEADRSAETCIISSLASLFPSITIIGE 182
L D + R K+D + TEADR+AE + +A+ FP I+GE
Sbjct: 7 DLADAAGETILPFFRASL---LVVDKKSDKTPVTEADRAAEEAMRELIAAFFPDHGILGE 63
Query: 183 E--GRESGHTHKMCDVPPEWIISDVD 206
E E G D W++ +D
Sbjct: 64 EFGHNEEG------DAERVWVLDPID 83
>gnl|CDD|236753 PRK10757, PRK10757, inositol monophosphatase; Provisional.
Length = 267
Score = 53.3 bits (128), Expect = 5e-08
Identities = 39/136 (28%), Positives = 51/136 (37%), Gaps = 38/136 (27%)
Query: 230 KSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDVDEA 289
K NDF T D++AE II ++ +P TII EE E
Sbjct: 34 KGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGE---------------------- 71
Query: 290 ILAKTCPPSLQTLAEKDIVVWV-DPLDGTREYTQGFLDHVTVLIGISAHGKALAGVIHQP 348
E V WV DPLDGT + + L H V I + G+ V++ P
Sbjct: 72 -----------LEGEDQDVQWVIDPLDGTTNFIKR-LPHFAVSIAVRIKGRTEVAVVYDP 119
Query: 349 FYN---YQNKESGAQL 361
N + GAQL
Sbjct: 120 MRNELFTATRGQGAQL 135
Score = 42.9 bits (101), Expect = 1e-04
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 149 KSKNDFSTEADRSAETCIISSLASLFPSITIIGEE-GRESGHTHKMCDVPPEWIISDVD 206
K NDF T D++AE II ++ +P TII EE G G DV +W+I +D
Sbjct: 34 KGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELEGEDQ---DV--QWVIDPLD 87
>gnl|CDD|178168 PLN02553, PLN02553, inositol-phosphate phosphatase.
Length = 270
Score = 50.5 bits (121), Expect = 5e-07
Identities = 36/130 (27%), Positives = 47/130 (36%), Gaps = 40/130 (30%)
Query: 227 VGDKSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVP-----PEW 281
V K + D TE D++ E I + L FPS IGEE T P W
Sbjct: 35 VEHKGQVDLVTETDKACEDLIFNHLKQAFPSHKFIGEE------TTAASGGTELTDEPTW 88
Query: 282 IISDVDEAILAKTCPPSLQTLAEKDIVVWVDPLDGTREYTQGFLDHVTVLIGISAHGKAL 341
I VDPLDGT + GF V V IG++ +
Sbjct: 89 I----------------------------VDPLDGTTNFVHGF-PFVCVSIGLTIGKVPV 119
Query: 342 AGVIHQPFYN 351
GV++ P +
Sbjct: 120 VGVVYNPILD 129
Score = 38.5 bits (90), Expect = 0.004
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 11/63 (17%)
Query: 149 KSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVP-----PEWIIS 203
K + D TE D++ E I + L FPS IGEE T P WI+
Sbjct: 38 KGQVDLVTETDKACEDLIFNHLKQAFPSHKFIGEE------TTAASGGTELTDEPTWIVD 91
Query: 204 DVD 206
+D
Sbjct: 92 PLD 94
>gnl|CDD|238821 cd01643, Bacterial_IMPase_like_2, Bacterial family of Mg++
dependent phosphatases, related to inositol
monophosphatases. These enzymes may dephosphorylate
inositol monophosphate or similar substrates.
Length = 242
Score = 48.5 bits (116), Expect = 2e-06
Identities = 34/154 (22%), Positives = 50/154 (32%), Gaps = 53/154 (34%)
Query: 230 KSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRE----SGHTHKMCDVPPEWIISD 285
K+ T ADR E I + LA+ FP ++GEEG SG W+I
Sbjct: 28 KADGSLVTAADRWVEQLIRARLAAQFPDDGVLGEEGGGIFPSSGWY---------WVI-- 76
Query: 286 VDEAILAKTCPPSLQTLAEKDIVVWVDPLDGTREYTQGFLDHVTVLIGISAHGKALAGVI 345
DP+DGT + +G + + I + G+ + GVI
Sbjct: 77 --------------------------DPIDGTTNFARG-IPIWAISIALLYRGEPVFGVI 109
Query: 346 HQPFYNYQNKESGAQLGRTIWGIQDLGVGGYTPN 379
P L +T + G
Sbjct: 110 ALP-----------ALNQTFVAFKGGGAFLNGKP 132
Score = 38.1 bits (89), Expect = 0.004
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 13/62 (20%)
Query: 149 KSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRE----SGHTHKMCDVPPEWIISD 204
K+ T ADR E I + LA+ FP ++GEEG SG W+I
Sbjct: 28 KADGSLVTAADRWVEQLIRARLAAQFPDDGVLGEEGGGIFPSSGWY---------WVIDP 78
Query: 205 VD 206
+D
Sbjct: 79 ID 80
>gnl|CDD|233360 TIGR01330, bisphos_HAL2, 3'(2'),5'-bisphosphate nucleotidase, HAL2
family. Sulfate is incorporated into
3-phosphoadenylylsulfate, PAPS, for utilization in
pathways such as methionine biosynthesis. Transfer of
sulfate from PAPS to an acceptor leaves adenosine
3'-5'-bisphosphate, APS. This model describes a form
found in plants of the enzyme 3'(2'),5'-bisphosphate
nucleotidase, which removes the 3'-phosphate from APS to
regenerate AMP and help drive the cycle. Sensitivity of
this essential enzyme to sodium and other metal ions
results is responsible for characterization of this
enzyme as a salt tolerance protein. Some members of this
family are active also as inositol 1-monophosphatase.
Length = 353
Score = 47.6 bits (113), Expect = 6e-06
Identities = 42/184 (22%), Positives = 70/184 (38%), Gaps = 31/184 (16%)
Query: 221 LAEKDIVGDKSKNDFS--TEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVP 278
L +K+D S T D A+ +I+ L S FP I+GEE +S +
Sbjct: 27 LISHKDSTVITKDDKSPVTVGDYGAQAIVINVLKSNFPDDPIVGEE--DSSGLSEADFT- 83
Query: 279 PEWIISDVDEAILAKT---CPPSLQTLAEKDIV---------------VWV-DPLDGTRE 319
+ V+E ++ + +D++ WV DP+DGT+
Sbjct: 84 LGRVNELVNETLVYAKNYKKDDQFPLKSLEDVLQIIDFGNYEGGRKGRHWVLDPIDGTKG 143
Query: 320 YTQGFLDHVTVLIGISAHGKALAGVIHQP-----FYNYQNKESGAQLGRTIWGIQDLGVG 374
+ +G D V + + +GK + GVI P Y QN + G ++ G
Sbjct: 144 FLRG--DQYAVCLALIENGKVVLGVIGCPNLPLSSYGAQNLKGSESKGCIFRAVRGSGAF 201
Query: 375 GYTP 378
Y+
Sbjct: 202 MYSL 205
Score = 34.1 bits (78), Expect = 0.10
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 147 GDKSKNDFS--TEADRSAETCIISSLASLFPSITIIGEE 183
+K+D S T D A+ +I+ L S FP I+GEE
Sbjct: 34 TVITKDDKSPVTVGDYGAQAIVINVLKSNFPDDPIVGEE 72
>gnl|CDD|182848 PRK10931, PRK10931, adenosine-3'(2'),5'-bisphosphate nucleotidase;
Provisional.
Length = 246
Score = 42.4 bits (100), Expect = 2e-04
Identities = 38/127 (29%), Positives = 51/127 (40%), Gaps = 47/127 (37%)
Query: 231 SKNDFS--TEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDVDE 288
SK D S T AD +A T I L +L P I ++ EE PP W +V +
Sbjct: 30 SKADDSPVTAADIAAHTVIKDGLRTLTPDIPVLSEED------------PPAW---EVRQ 74
Query: 289 AILAKTCPPSLQTLAEKDIVVW-----VDPLDGTREYTQ--GFLDHVTVLIGISAHGKAL 341
W VDPLDGT+E+ + G TV I + GK +
Sbjct: 75 H--------------------WQRYWLVDPLDGTKEFIKRNG---EFTVNIALIEQGKPV 111
Query: 342 AGVIHQP 348
GV++ P
Sbjct: 112 LGVVYAP 118
Score = 30.0 bits (68), Expect = 1.7
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 14/53 (26%)
Query: 150 SKNDFS--TEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEW 200
SK D S T AD +A T I L +L P I ++ EE PP W
Sbjct: 30 SKADDSPVTAADIAAHTVIKDGLRTLTPDIPVLSEED------------PPAW 70
>gnl|CDD|178499 PLN02911, PLN02911, inositol-phosphate phosphatase.
Length = 296
Score = 40.9 bits (96), Expect = 6e-04
Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 42/124 (33%)
Query: 231 SKNDFS--TEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDVDE 288
K D S T ADR+AE + S + FPS I GEE H + + ++
Sbjct: 63 DKEDLSPVTIADRAAEEAMRSIILENFPSHAIFGEE-----HGLRCGEGSSDY------- 110
Query: 289 AILAKTCPPSLQTLAEKDIVVWV-DPLDGTREYTQG---FLDHVTVLIGISAHGKALAGV 344
VWV DP+DGT+ + G F LI + GK + G+
Sbjct: 111 --------------------VWVLDPIDGTKSFITGKPLF----GTLIALLYKGKPVLGI 146
Query: 345 IHQP 348
I QP
Sbjct: 147 IDQP 150
Score = 39.3 bits (92), Expect = 0.002
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 134 TRKYARRRYKRIQGDKSKNDFS--TEADRSAETCIISSLASLFPSITIIGEEG 184
TRKY R +++ I K D S T ADR+AE + S + FPS I GEE
Sbjct: 51 TRKYFRTKFEII----DKEDLSPVTIADRAAEEAMRSIILENFPSHAIFGEEH 99
>gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2.
Length = 605
Score = 41.0 bits (96), Expect = 9e-04
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 69 DVLEPFSTNEWSFINENIHTLWDSLSPQEQAKFPFNIRDLDWTKYL 114
+ EP++ F N N L + +S +E+A+F F++ +DW Y+
Sbjct: 543 SIYEPYTFYGGRFDNSNTQRLMERMSEEEKAEFGFDVGSIDWRDYI 588
>gnl|CDD|215392 PLN02737, PLN02737, inositol monophosphatase family protein.
Length = 363
Score = 37.9 bits (88), Expect = 0.006
Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 35/117 (29%)
Query: 230 KSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDVDEA 289
K D T+ D+++E I+ + FP I+GEEG +I D
Sbjct: 107 KGLTDLVTDTDKASEAAILEVVRKNFPDHLILGEEGG---------------VIGDSSSD 151
Query: 290 ILAKTCPPSLQTLAEKDIVVW-VDPLDGTREYTQGFLDHVTVLIGISAHGKALAGVI 345
L W +DPLDGT + G+ V +G+ G A +
Sbjct: 152 YL------------------WCIDPLDGTTNFAHGY-PSFAVSVGVLFRGTPAAATV 189
Score = 30.5 bits (69), Expect = 1.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 149 KSKNDFSTEADRSAETCIISSLASLFPSITIIGEEGRESGHT 190
K D T+ D+++E I+ + FP I+GEEG G +
Sbjct: 107 KGLTDLVTDTDKASEAAILEVVRKNFPDHLILGEEGGVIGDS 148
>gnl|CDD|221069 pfam11304, DUF3106, Protein of unknown function (DUF3106). Some
members in this family of proteins are annotated as
transmembrane proteins however this cannot be confirmed.
Currently no function is known.
Length = 107
Score = 30.4 bits (69), Expect = 0.47
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 13/86 (15%)
Query: 70 VLEPFSTNEWSFINE-------NIHTLWDSLSPQEQAKFPFNIRDLDWTKYLETYVKGI- 121
L P + W ++ I + +SP+EQ + + W K L +
Sbjct: 12 ALAPLA-ERWDSLSPEQRQKWLRIAERYPKMSPEEQKRLQERMT--RWAK-LSPEQREQA 67
Query: 122 -LVYQLQDKLDPETRKYARRRYKRIQ 146
L YQ +L PE ++ R R++ Q
Sbjct: 68 RLNYQRFRQLPPEQKEALRARWEAYQ 93
>gnl|CDD|177781 PLN00187, PLN00187, photosystem II light-harvesting complex II
protein Lhcb4; Provisional.
Length = 286
Score = 29.4 bits (66), Expect = 2.9
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 102 PFNIRDLDWTKYLETYVKGILVYQLQDKLDPETRKY 137
PF+I L W +E V G + +Q +LDPE R Y
Sbjct: 182 PFSITTLIW---IEVLVIGYIEFQRNAELDPEKRLY 214
>gnl|CDD|183673 PRK12676, PRK12676, bifunctional inositol-1
monophosphatase/fructose-1,6-bisphosphatase; Reviewed.
Length = 263
Score = 28.7 bits (65), Expect = 4.3
Identities = 39/204 (19%), Positives = 63/204 (30%), Gaps = 75/204 (36%)
Query: 201 IISDVDEAILAKTCPPSLQTLAEKDIVGDKSKNDF--------STEA-DRSAETCIISSL 251
+ +V++AI + G + T+ D+ AE I+ L
Sbjct: 13 MAKEVEKAI--------------MPLFGTPDAGETVGMGADGTPTKLIDKVAEDIILEVL 58
Query: 252 ASLFPSITIIGEEGRESGHTHKMCDVPPEWIISDVDEAILAKTCPPSLQTLAEKDIVVWV 311
L + II EE G ++ PE+ + +
Sbjct: 59 KPLGRCVNIISEE---LG---EIVGNGPEYTV--------------------------VL 86
Query: 312 DPLDGTREYTQG--FLDHVTVLIGISAHGKALAGVIHQP-----FYNYQNKESGAQL-GR 363
DPLDGT G F + I + GK + G ++ + K GA L G+
Sbjct: 87 DPLDGTYNAINGIPFY---AISIAVFKGGKPVYGYVYNLATGDFYEAIPGK--GAYLNGK 141
Query: 364 TI--WGIQDL-----GVGGYTPNP 380
I +L + GY
Sbjct: 142 PIKVSKTSELNESAVSIYGYRRGK 165
>gnl|CDD|140249 PTZ00222, PTZ00222, 60S ribosomal protein L7a; Provisional.
Length = 263
Score = 28.9 bits (64), Expect = 4.6
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 123 VYQLQDKLDPETRKYARRRYKRIQGDKSKNDFSTEADRSAETCIISSLASLFPSI 177
+ +L K PETRK R R ++ +K K+ T + + A +++ L + +I
Sbjct: 91 LLKLIKKYAPETRKARRDRLHKVAEEKKKDPKKTVSTK-APLAVVTGLQEVTRAI 144
>gnl|CDD|181205 PRK08040, PRK08040, putative semialdehyde dehydrogenase;
Provisional.
Length = 336
Score = 28.9 bits (65), Expect = 5.4
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 4/21 (19%)
Query: 327 HVTVLIGISAHGKA----LAG 343
HVT L+ SAHGKA LAG
Sbjct: 154 HVTNLLSASAHGKAAVDALAG 174
>gnl|CDD|163005 TIGR02762, TraL_TIGR, type IV conjugative transfer system protein
TraL. This protein is part of the type IV secretion
system for conjugative plasmid transfer. The function
of the TraL protein is unknown [Cellular processes,
Conjugation].
Length = 95
Score = 26.6 bits (59), Expect = 9.8
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 15 LWWYCYHLVEDKTVYAIQSLFYHYLFAYI 43
+W + + + LFY YL +
Sbjct: 52 IWKRLRRIKGGEGENFLLHLFYWYLPGSL 80
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.319 0.136 0.421
Gapped
Lambda K H
0.267 0.0724 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 20,372,577
Number of extensions: 1955203
Number of successful extensions: 1765
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1749
Number of HSP's successfully gapped: 66
Length of query: 395
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 296
Effective length of database: 6,546,556
Effective search space: 1937780576
Effective search space used: 1937780576
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (26.9 bits)