RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10091
(237 letters)
>d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos
taurus), brain [TaxId: 9913]}
Length = 400
Score = 91.6 bits (226), Expect = 3e-22
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 19/130 (14%)
Query: 123 RSHNTSVVQAVLDAMKPDEVVRVGGAGNKVLLVMEGKAHAYVYANAGCKRWDTCAPEAIL 182
+ ++ L + + + R GAG K L V+ G A Y+++ +WD+CA AIL
Sbjct: 266 STSEKETIKGALSHVCGERIFRAAGAGYKSLCVILGLADIYIFSEDTTFKWDSCAAHAIL 325
Query: 183 NAQGGLLTDVHGVPYDYTDTV-------------------DPLNKGGVIATAVKSEHDYY 223
A GG + D+ DT NKGG+IA + + + +
Sbjct: 326 RAMGGGMVDLKECLERNPDTGLDLPQLVYHVGNEGAAGVDQWANKGGLIAYRSEKQLETF 385
Query: 224 ISRIPQEVKD 233
+SR+ Q +
Sbjct: 386 LSRLLQHLAP 395
>d1jp4a_ e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 304
Score = 82.0 bits (201), Expect = 3e-19
Identities = 60/114 (52%), Positives = 80/114 (70%), Gaps = 2/114 (1%)
Query: 123 RSHNTSVVQAVLDAMKPDEVVRVGGAGNKVLLVMEGKAHAYVYANAGCKRWDTCAPEAIL 182
RSH+ +V + AM PD V+RVGGAGNK++ ++EGKA AYV+A+ GCK+WDTCAPE IL
Sbjct: 192 RSHSNKLVTDCIAAMNPDNVLRVGGAGNKIIQLIEGKASAYVFASPGCKKWDTCAPEVIL 251
Query: 183 NAQGGLLTDVHGVPYDYTDTVDPLNKGGVIATAVKSEHDYYISRIPQEVKDKLV 236
+A GG LTD+HG P Y V +N GV+A ++YY SR+P+ VK L+
Sbjct: 252 HAVGGKLTDIHGNPLQYDKEVKHMNSAGVLAAL--RNYEYYASRVPESVKSALI 303
>d1ka1a_ e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP
phosphatase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 354
Score = 55.1 bits (131), Expect = 1e-09
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 156 MEGKAHAYV----YANAGCKRWDTCAPEAILNAQGGLLTD-VHGVPYDYTDTVDPLNKGG 210
G A Y+ + K WD A I++ GG+ TD + VP D+ + KG
Sbjct: 271 ALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPLDFGNGRTLATKGV 330
Query: 211 VIATAVKSEHDYYISRIPQEVKDK 234
+ ++ + HD +S ++ +
Sbjct: 331 IASSGPRELHDLVVSTSCDVIQSR 354
>d1xi6a_ e.7.1.1 (A:) Archaeal inositol
monophosphatase/fructose-1,6-bisphosphatase {Pyrococcus
furiosus [TaxId: 2261]}
Length = 249
Score = 50.8 bits (120), Expect = 2e-08
Identities = 29/232 (12%), Positives = 53/232 (22%), Gaps = 18/232 (7%)
Query: 4 IIRSIYCNPSATAD---------VIPADMAINALVCSAWYSANSYYKKTSPVLPIFN--- 51
I + NP D L+ S +
Sbjct: 19 TIMPFFGNPDGGKLVKISPSGDETKLVDKLAEDLILSRITELGVNVVSEEVGVIDNESEY 78
Query: 52 --YVSSTDNRITWLEFSNKTFGAATKIPSSKALWWYCYHLVEDKTVYAIQSLFYHYFFAY 109
V D ++ + K ++ Y + ++ I
Sbjct: 79 TVIVDPLDGSYNFIAGIPFFALSLAVFKKDKPIYAIIYEPMTERFFEGIPGEGAFLNGKR 138
Query: 110 IVDFCAPLTKSKLRSHNTSVVQAVLDAMKPDEVVRVGGAGNKVLLVMEGKAHAYVYANAG 169
I P K + S + +G ++ + G V
Sbjct: 139 IKVRKTPDEKPSI--SFYSRGKGHEIVKHVKRTRTLGAIALELAYLAMGALDGVVDVRKY 196
Query: 170 CKRWDTCAPEAILNAQGGLLTDVHGVPYDYTDTVDPLNKGGVIATAVKSEHD 221
+ D A I G L+ D G D + + ++ VIA +
Sbjct: 197 VRPTDIAAGTIIAKEAGALIKDSAGKDIDI--SFNATDRLDVIAVNSEELLK 246
>d1vdwa_ e.7.1.1 (A:) Archaeal inositol
monophosphatase/fructose-1,6-bisphosphatase {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 253
Score = 49.6 bits (117), Expect = 6e-08
Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Query: 137 MKPDEVVRVGGAGNKVLLVMEGKAHAYVYANAGCKRWDTCAPEAILNAQGGLLTDVHGVP 196
K +G ++ + G A V + D A I G ++ D+ G
Sbjct: 163 DKVKRTRTLGAIALELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLDGKD 222
Query: 197 YDYTDTVDPLNKGGVIATAVKSEHDYYISRI 227
+ T K +IA + + + I
Sbjct: 223 VEITF--SATEKVNIIAANNEELLETILRSI 251
>d1g0ha_ e.7.1.1 (A:) Archaeal inositol
monophosphatase/fructose-1,6-bisphosphatase {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 252
Score = 47.0 bits (110), Expect = 6e-07
Identities = 31/219 (14%), Positives = 62/219 (28%), Gaps = 8/219 (3%)
Query: 12 PSATADVIPADMAINALVC---SAWYSANSYYKKTSPVLPIFNYVSSTDNRITWLEFSNK 68
+ D I D+A+ L + +S + + + + N I + F
Sbjct: 39 ETEIFDKISEDIALKYLKSLNVNIVSEELGVIDNSSEWTVVIDPIDGSFNFINGIPFFAF 98
Query: 69 TFGAATKIPSSKALWWYCYHLVEDKTVYAIQSLFYHYFFAYIVDFCAPLTKSKLRSHNTS 128
FG L + + + + S S
Sbjct: 99 CFGVFKNNEPYYGLTYEFLTKSFYEAYKGKGAYLNGRKIKVKDFNPNNIVISYYPSKKID 158
Query: 129 VVQAVLDAMKPDEVVRVGGAGNKVLLVMEGKAHAYVYANAGCKRWDTCAPEAILNAQGGL 188
+ + K V G G ++ V +G A + D + I G L
Sbjct: 159 LEK---LRNKVKRVRIFGAFGLEMCYVAKGTLDAVFDVRPKVRAVDIASSYIICKEAGAL 215
Query: 189 LTDVHGVPYDYTDTVDPLNKGGVIATAVKSEHDYYISRI 227
+TD +G + ++ ++ +I K D + +
Sbjct: 216 ITDENGDELKF--DLNATDRLNIIVANSKEMLDIILDLL 252
>d1lbva_ e.7.1.1 (A:) Archaeal inositol
monophosphatase/fructose-1,6-bisphosphatase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 252
Score = 46.6 bits (109), Expect = 6e-07
Identities = 27/203 (13%), Positives = 52/203 (25%), Gaps = 17/203 (8%)
Query: 21 ADMAINALVCSAWYSANSYY-------KKTSPVLPIFNYVSSTDNRITWLEFSNKTFGAA 73
AD V + + T N + + + +
Sbjct: 45 ADRVAEDAALEILRKERVTVVTEESGVLGEGDVFVALDPLDGTFNATRGIPVYSVSLCFS 104
Query: 74 TKIPSSKALWWYCYHLVEDKTVYAIQSLFYHYFFAYIVDFCAPLTKSKLRSHNTSVVQAV 133
A + Y Y+L YA S Y V L + + +
Sbjct: 105 YSDKLKDAFFGYVYNLATGDEYYADSSGAYRNGERIEVSDAEELYCNAIIYYPDRK---- 160
Query: 134 LDAMKPDEVVRVGGAGNKVLLVMEGKAHAYVY--ANAGCKRWDTCAPEAILNAQGGLLTD 191
+ G A ++ +G ++ + +D A I GG +T+
Sbjct: 161 ---FPFKRMRIFGSAATELCFFADGSFDCFLDIRPGKMLRIYDAAAGVFIAEKAGGKVTE 217
Query: 192 VHGVPYDYTDTVDPLNKGGVIAT 214
+ G D + ++A
Sbjct: 218 LDGESLGNKKF-DMQERLNIVAA 239
>d2hhma_ e.7.1.1 (A:) Inositol monophosphatase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 272
Score = 46.2 bits (108), Expect = 1e-06
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 9/86 (10%)
Query: 136 AMKPDEVVRVGGAGNKVLLVMEGKAHAYVYANAGCKRWDTCAPEAILNAQGGLLTDVHGV 195
+ + VG A + LV G A AY G WD I+ GG+L DV G
Sbjct: 180 CIPVHGIRSVGTAAVNMCLVATGGADAYYEM--GIHCWDVAGAGIIVTEAGGVLMDVTGG 237
Query: 196 PYDYTDTVDPLNKGGVIATAVKSEHD 221
P+D VIA + +
Sbjct: 238 PFDL-------MSRRVIAANNRILAE 256
>d1m5xa_ d.95.2.1 (A:) DNA endonuclease I-MsoI {Monomastix sp.
cl-1997 [TaxId: 141716]}
Length = 161
Score = 27.9 bits (62), Expect = 0.80
Identities = 8/92 (8%), Positives = 22/92 (23%), Gaps = 7/92 (7%)
Query: 37 NSYYKKTSPVLPIFNYVSSTDNRITWLEFSNKTFGAATKIPSSKALWWYCYHLVEDKTVY 96
Y V + ++ +L+ G + + Y ++ +
Sbjct: 28 PDYKDIKYQVSLAIS-FIQRKDKFPYLQDIYDQLGKRGNLRKDRGDGIADYTIIGSTHLS 86
Query: 97 AIQSLFYHYF------FAYIVDFCAPLTKSKL 122
I Y I+ +++
Sbjct: 87 IILPDLVPYLRIKKKQANRILHIINLYPQAQK 118
>d2ebfx3 d.3.1.17 (X:1094-1285) Dermonecrotic toxin, ToxA
{Pasteurella multocida [TaxId: 747]}
Length = 192
Score = 26.6 bits (58), Expect = 2.1
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 17 DVIPADMAINALVCSAWYSANSYYKKTSPVLPIFNYVSSTDNRITW------LEFSNKTF 70
D I D+ +N+LVC S +S K + L + ITW +EFS++
Sbjct: 53 DAIKNDVKMNSLVCMEAGSCDSVSPKVAARLKDMGLEAGMGASITWWRREGGMEFSHQMH 112
Query: 71 GAAT 74
A+
Sbjct: 113 TTAS 116
>d1w27a_ a.127.1.2 (A:) Phenylalanine ammonia-lyase, PAL {Parsley
(Petroselinum crispum), PAL1 [TaxId: 4043]}
Length = 692
Score = 26.8 bits (59), Expect = 2.9
Identities = 13/71 (18%), Positives = 21/71 (29%), Gaps = 11/71 (15%)
Query: 115 APLTKSKLRSHNTSVVQAVLDAMKPDEVVRVGGAGNKVLLVMEGKAHAYVYANAGCKRWD 174
L K +R N + D P R M + + + +G R++
Sbjct: 104 GALQKELIRFLNAGIFGNGSDNTLPHSATR---------AAMLVRINTLLQGYSGI-RFE 153
Query: 175 TC-APEAILNA 184
A LN
Sbjct: 154 ILEAITKFLNQ 164
>d2b8na1 c.118.1.1 (A:4-417) Putative glycerate kinase (hypothetical
protein TM1585) {Thermotoga maritima [TaxId: 2336]}
Length = 414
Score = 25.7 bits (56), Expect = 6.0
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 122 LRSHNTSVVQAVLDAMKPDEVVRVG---GAGNKVLLVMEGKAHAYVYANAGCKRWDTCAP 178
L+ +V+ ++A+ PD V+ ++V+LV GKA A+ A A +
Sbjct: 4 LKKLAIEIVKKSIEAVFPDRAVKETLPKLNLDRVILVAVGKA-AWRMAKAAYEVLGKKIR 62
Query: 179 EAIL 182
+ ++
Sbjct: 63 KGVV 66
>g1qqp.1 b.121.4.1 (4:,2:) Aphthovirus (Foot-and-mouth disease
virus) coat proteins {FMDV (Foot-and-mouth disease
virus), strain bfs, 1860 [TaxId: 12110]}
Length = 289
Score = 25.3 bits (55), Expect = 6.5
Identities = 4/30 (13%), Positives = 7/30 (23%), Gaps = 1/30 (3%)
Query: 78 SSKALWWYCYHLVEDKTVYAIQSLFYHYFF 107
S + K VY + +
Sbjct: 144 DSFGRCHLLELPTDHKGVYG-SLTDSYAYM 172
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.133 0.415
Gapped
Lambda K H
0.267 0.0590 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 903,268
Number of extensions: 39424
Number of successful extensions: 85
Number of sequences better than 10.0: 1
Number of HSP's gapped: 82
Number of HSP's successfully gapped: 18
Length of query: 237
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 154
Effective length of database: 1,268,006
Effective search space: 195272924
Effective search space used: 195272924
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.7 bits)