Query psy10095
Match_columns 680
No_of_seqs 385 out of 1492
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 17:45:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10095.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10095hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lss_A Seryl-tRNA synthetase; 100.0 3.5E-83 1.2E-87 707.4 32.9 350 153-523 7-400 (484)
2 3qne_A Seryl-tRNA synthetase, 100.0 1.4E-82 4.6E-87 702.3 28.3 345 153-523 1-377 (485)
3 3vbb_A Seryl-tRNA synthetase, 100.0 4.2E-81 1.4E-85 695.0 28.9 359 153-523 2-402 (522)
4 1wle_A Seryl-tRNA synthetase; 100.0 2.3E-80 7.7E-85 689.2 33.6 371 130-525 21-414 (501)
5 2dq0_A Seryl-tRNA synthetase; 100.0 7.9E-74 2.7E-78 631.5 29.7 343 153-523 1-381 (455)
6 1ses_A Seryl-tRNA synthetase; 100.0 2.1E-73 7.1E-78 623.0 29.2 341 153-524 1-357 (421)
7 2dq3_A Seryl-tRNA synthetase; 100.0 2.6E-71 8.9E-76 607.1 28.6 343 153-523 1-360 (425)
8 3err_A Fusion protein of micro 100.0 2.7E-66 9.3E-71 580.8 31.6 275 227-525 177-467 (536)
9 3mf2_A BLL0957 protein; aminoa 100.0 1.3E-45 4.3E-50 391.3 13.6 205 296-523 47-281 (346)
10 1nj1_A PROR, proline-tRNA synt 100.0 4.2E-36 1.4E-40 334.9 13.0 246 256-524 11-264 (501)
11 2cja_A Seryl-tRNA synthetase; 100.0 1.5E-33 5.3E-38 314.8 15.2 221 285-523 203-463 (522)
12 1zr9_A Zinc finger protein 593 100.0 1.5E-33 5E-38 260.3 2.1 113 14-126 5-120 (124)
13 4hvc_A Bifunctional glutamate/ 100.0 2E-30 7E-35 290.0 15.8 220 285-524 31-256 (519)
14 3ial_A Prolyl-tRNA synthetase; 100.0 1.4E-29 4.9E-34 282.9 11.0 214 289-523 30-248 (518)
15 3uh0_A Threonyl-tRNA synthetas 99.9 4.6E-26 1.6E-30 251.7 12.7 181 279-479 29-212 (460)
16 1evl_A Threonyl-tRNA synthetas 99.9 9.9E-25 3.4E-29 236.0 6.1 204 285-517 1-207 (401)
17 1qf6_A THRRS, threonyl-tRNA sy 99.9 8.8E-25 3E-29 250.3 5.5 206 283-517 240-448 (642)
18 2j3l_A Prolyl-tRNA synthetase; 99.9 4.5E-23 1.5E-27 232.5 13.9 212 283-522 19-230 (572)
19 3ikl_A DNA polymerase subunit 99.9 4.9E-23 1.7E-27 226.8 12.1 182 303-525 94-280 (459)
20 1nj8_A Proline-tRNA synthetase 99.9 2.4E-21 8.1E-26 214.0 17.8 217 284-521 8-229 (459)
21 1ati_A Glycyl-tRNA synthetase; 99.8 1.9E-21 6.6E-26 217.1 9.8 222 286-523 7-315 (505)
22 1hc7_A Prolyl-tRNA synthetase; 99.8 6.6E-20 2.3E-24 203.5 15.3 214 285-520 16-233 (477)
23 1nyr_A Threonyl-tRNA synthetas 99.8 7.7E-21 2.6E-25 217.7 6.0 200 283-506 239-443 (645)
24 3a32_A Probable threonyl-tRNA 99.7 1.8E-18 6E-23 191.4 10.1 176 283-484 20-206 (471)
25 2i4l_A Proline-tRNA ligase; al 99.7 5.4E-18 1.8E-22 186.9 13.4 191 283-497 39-229 (458)
26 1g5h_A Mitochondrial DNA polym 99.5 4.6E-15 1.6E-19 163.8 7.2 219 285-525 25-270 (454)
27 1qe0_A Histidyl-tRNA synthetas 99.4 5E-13 1.7E-17 144.7 10.2 154 302-484 6-163 (420)
28 1zr9_A Zinc finger protein 593 99.4 4.1E-14 1.4E-18 130.8 0.4 77 595-671 8-120 (124)
29 3dsq_A Pyrrolysyl-tRNA synthet 99.1 3.4E-10 1.1E-14 118.2 13.6 160 316-517 74-234 (288)
30 4e51_A Histidine--tRNA ligase; 98.9 4E-09 1.4E-13 116.7 9.8 152 302-484 36-192 (467)
31 2zt5_A Glycyl-tRNA synthetase; 98.8 6.1E-09 2.1E-13 120.5 10.9 219 286-521 69-412 (693)
32 1h4v_B Histidyl-tRNA synthetas 98.5 4.7E-07 1.6E-11 98.0 13.0 154 301-483 6-162 (421)
33 1wu7_A Histidyl-tRNA synthetas 98.5 7.9E-07 2.7E-11 96.9 13.1 154 301-487 9-165 (434)
34 1z7m_A ATP phosphoribosyltrans 98.5 1.8E-06 6E-11 92.1 14.9 151 301-483 25-178 (344)
35 1htt_A Histidyl-tRNA synthetas 98.3 1.6E-06 5.5E-11 93.9 10.3 154 301-484 7-164 (423)
36 3rac_A Histidine-tRNA ligase; 98.2 5.2E-06 1.8E-10 89.5 11.0 158 301-483 26-185 (373)
37 3qtc_A Pyrrolysyl-tRNA synthet 98.2 6.6E-06 2.2E-10 85.5 11.0 131 317-483 81-213 (290)
38 3od1_A ATP phosphoribosyltrans 98.1 9.5E-06 3.2E-10 88.2 11.2 151 301-483 13-164 (400)
39 3lc0_A Histidyl-tRNA synthetas 97.9 2.3E-05 7.7E-10 86.7 9.4 156 296-483 26-186 (456)
40 3net_A Histidyl-tRNA synthetas 97.9 4.4E-05 1.5E-09 84.3 11.3 168 291-483 4-183 (465)
41 4g84_A Histidine--tRNA ligase, 97.5 0.00046 1.6E-08 75.3 11.2 149 303-485 19-169 (464)
42 1zu1_A DSRBP-ZFA, RNA binding 97.4 4E-05 1.4E-09 70.7 2.0 38 52-89 89-126 (127)
43 4g85_A Histidine-tRNA ligase, 97.1 0.0014 5E-08 73.0 10.2 148 304-485 73-222 (517)
44 1usy_A ATP phosphoribosyltrans 96.1 0.0064 2.2E-07 62.6 6.1 110 324-482 14-127 (275)
45 1b7y_A Phers, protein (phenyla 96.0 0.066 2.3E-06 57.3 13.8 173 312-517 104-284 (350)
46 3l4g_A Phenylalanyl-tRNA synth 95.9 0.045 1.5E-06 61.3 12.3 92 402-517 344-436 (508)
47 1nnh_A Asparaginyl-tRNA synthe 95.9 0.089 3.1E-06 54.7 13.6 121 313-469 16-140 (294)
48 3cw1_L U1 small nuclear ribonu 94.7 0.013 4.4E-07 49.9 2.3 34 55-88 2-37 (77)
49 2rhq_A Phenylalanyl-tRNA synth 93.7 0.74 2.5E-05 47.8 13.6 124 312-479 56-187 (294)
50 1zu1_A DSRBP-ZFA, RNA binding 93.3 0.031 1.1E-06 51.3 2.0 34 56-89 32-65 (127)
51 3a74_A Lysyl-tRNA synthetase; 93.2 0.56 1.9E-05 52.3 12.5 117 313-469 175-291 (493)
52 1wyd_A Hypothetical aspartyl-t 93.0 0.48 1.6E-05 51.9 11.3 113 313-468 135-248 (429)
53 3bju_A Lysyl-tRNA synthetase; 93.0 0.36 1.2E-05 54.2 10.5 117 313-470 177-294 (521)
54 3a5y_A GENX, putative lysyl-tR 92.3 0.53 1.8E-05 50.2 10.2 124 311-469 35-158 (345)
55 1x54_A Asparaginyl-tRNA synthe 92.3 0.52 1.8E-05 51.7 10.4 112 313-467 136-248 (434)
56 4dgw_A PRE-mRNA-splicing facto 92.2 0.054 1.8E-06 59.0 2.5 58 25-86 264-322 (402)
57 3pco_A Phenylalanyl-tRNA synth 91.9 0.67 2.3E-05 49.2 10.4 90 402-517 181-273 (327)
58 2xgt_A Asparaginyl-tRNA synthe 91.7 0.8 2.7E-05 50.2 11.1 114 313-469 133-247 (435)
59 1e1o_A Lysyl-tRNA synthetase, 91.4 1.1 3.8E-05 50.1 11.9 116 313-469 184-300 (504)
60 2du7_A O-phosphoseryl-tRNA syn 90.9 1 3.4E-05 50.9 11.0 95 402-517 214-311 (549)
61 3m4p_A Ehasnrs, asparaginyl-tR 90.1 1.4 4.8E-05 48.6 11.2 112 313-469 157-271 (456)
62 3nem_A Aspartyl-tRNA synthetas 89.7 1.4 4.6E-05 48.5 10.6 113 314-470 139-255 (438)
63 1eov_A ASPRS, aspartyl-tRNA sy 89.6 1.4 4.9E-05 49.0 10.7 117 311-469 177-295 (487)
64 1l0w_A Aspartyl-tRNA synthetas 89.6 1.4 4.7E-05 50.2 10.8 116 314-471 146-263 (580)
65 2m0f_A Zinc finger and BTB dom 89.5 0.15 5.2E-06 32.2 1.8 24 55-78 1-24 (29)
66 3i7f_A Aspartyl-tRNA synthetas 89.4 1.2 4.2E-05 50.3 10.1 116 313-469 245-361 (548)
67 3cmq_A Phenylalanyl-tRNA synth 88.8 3.4 0.00011 45.1 12.8 172 311-526 50-263 (415)
68 4ex5_A Lysine--tRNA ligase; st 88.7 0.89 3E-05 51.2 8.4 116 313-469 205-321 (529)
69 1znf_A 31ST zinc finger from X 88.3 0.25 8.6E-06 30.8 2.2 22 57-78 2-23 (27)
70 2m0d_A Zinc finger and BTB dom 87.8 0.23 7.9E-06 31.5 1.8 23 56-78 3-25 (30)
71 1p7a_A BF3, BKLF, kruppel-like 87.7 0.3 1E-05 33.1 2.4 25 54-78 9-33 (37)
72 1c0a_A Aspartyl tRNA synthetas 87.5 2 6.8E-05 48.9 10.3 117 313-471 139-257 (585)
73 2kvf_A Zinc finger and BTB dom 87.2 0.29 1E-05 30.9 2.0 23 56-78 3-25 (28)
74 1n9w_A Aspartyl-tRNA synthetas 87.1 1.5 5.1E-05 47.9 8.7 113 313-468 126-240 (422)
75 2kvg_A Zinc finger and BTB dom 86.9 0.29 9.9E-06 31.1 1.9 22 57-78 4-25 (27)
76 2elv_A Zinc finger protein 406 86.9 0.37 1.3E-05 32.5 2.5 26 53-78 6-31 (36)
77 2kvh_A Zinc finger and BTB dom 86.9 0.28 9.5E-06 30.9 1.7 23 56-78 3-25 (27)
78 1srk_A Zinc finger protein ZFP 86.8 0.38 1.3E-05 32.1 2.5 26 53-78 4-29 (35)
79 3eph_A TRNA isopentenyltransfe 86.7 0.22 7.7E-06 54.3 1.9 35 55-89 359-399 (409)
80 2elt_A Zinc finger protein 406 86.6 0.34 1.1E-05 32.5 2.1 26 53-78 6-31 (36)
81 1rik_A E6APC1 peptide; E6-bind 86.5 0.3 1E-05 30.9 1.7 22 57-78 3-24 (29)
82 2elx_A Zinc finger protein 406 86.3 0.33 1.1E-05 32.2 2.0 25 54-78 5-29 (35)
83 4ah6_A Aspartate--tRNA ligase, 86.2 1.3 4.3E-05 50.9 7.8 113 313-467 149-263 (617)
84 2elq_A Zinc finger protein 406 86.2 0.36 1.2E-05 32.6 2.1 26 53-78 6-31 (36)
85 1ard_A Yeast transcription fac 86.2 0.31 1.1E-05 30.8 1.7 22 57-78 3-24 (29)
86 2elr_A Zinc finger protein 406 85.5 0.4 1.4E-05 32.1 2.1 26 53-78 6-31 (36)
87 2elm_A Zinc finger protein 406 85.3 0.41 1.4E-05 32.8 2.1 24 54-77 7-31 (37)
88 2elo_A Zinc finger protein 406 84.6 0.42 1.4E-05 32.3 1.9 25 54-78 7-31 (37)
89 2lvu_A Zinc finger and BTB dom 85.0 0.19 6.4E-06 31.5 0.0 23 56-78 2-24 (26)
90 2els_A Zinc finger protein 406 84.4 0.5 1.7E-05 31.8 2.2 25 54-78 7-31 (36)
91 2ab3_A ZNF29; zinc finger prot 84.3 0.5 1.7E-05 29.7 2.0 23 56-78 2-26 (29)
92 1bbo_A Human enhancer-binding 84.3 0.35 1.2E-05 36.1 1.4 28 55-82 28-55 (57)
93 1njq_A Superman protein; zinc- 83.8 0.52 1.8E-05 32.5 2.1 25 54-78 4-28 (39)
94 2el5_A Zinc finger protein 268 83.7 0.58 2E-05 32.7 2.3 25 54-78 8-32 (42)
95 2elp_A Zinc finger protein 406 83.4 0.49 1.7E-05 32.1 1.8 24 55-78 8-32 (37)
96 1rim_A E6APC2 peptide; E6-bind 83.4 0.46 1.6E-05 31.9 1.6 22 57-78 3-24 (33)
97 2lvt_A Zinc finger and BTB dom 83.8 0.23 7.8E-06 31.7 0.0 22 57-78 3-24 (29)
98 2m0e_A Zinc finger and BTB dom 83.2 0.38 1.3E-05 30.1 1.1 22 57-78 3-24 (29)
99 1fv5_A First zinc finger of U- 83.1 0.55 1.9E-05 33.7 2.0 24 53-76 5-28 (36)
100 2ept_A Zinc finger protein 32; 83.1 0.71 2.4E-05 32.1 2.6 26 53-78 7-32 (41)
101 2eof_A Zinc finger protein 268 82.9 0.55 1.9E-05 33.0 1.9 26 53-78 9-34 (44)
102 2epc_A Zinc finger protein 32; 82.9 0.58 2E-05 32.5 2.0 26 53-78 8-33 (42)
103 2eos_A B-cell lymphoma 6 prote 82.7 0.66 2.3E-05 32.4 2.3 25 54-78 9-33 (42)
104 2yrm_A B-cell lymphoma 6 prote 82.7 0.59 2E-05 33.1 2.0 26 53-78 7-32 (43)
105 2ytb_A Zinc finger protein 32; 82.7 0.59 2E-05 32.5 2.0 26 53-78 8-33 (42)
106 1klr_A Zinc finger Y-chromosom 82.6 0.45 1.5E-05 30.0 1.3 22 57-78 3-24 (30)
107 2en2_A B-cell lymphoma 6 prote 82.3 0.61 2.1E-05 32.5 2.0 26 53-78 8-33 (42)
108 1paa_A Yeast transcription fac 82.2 0.55 1.9E-05 29.9 1.6 21 57-77 3-24 (30)
109 2epv_A Zinc finger protein 268 82.1 0.79 2.7E-05 32.5 2.5 26 53-78 9-34 (44)
110 2el4_A Zinc finger protein 268 82.1 0.77 2.6E-05 32.7 2.5 26 53-78 9-34 (46)
111 2emi_A Zinc finger protein 484 81.9 0.77 2.6E-05 32.8 2.4 25 54-78 10-34 (46)
112 2em5_A ZFP-95, zinc finger pro 81.7 0.74 2.5E-05 32.9 2.3 26 53-78 9-34 (46)
113 2emg_A Zinc finger protein 484 81.6 0.71 2.4E-05 33.0 2.1 26 53-78 9-34 (46)
114 2du3_A O-phosphoseryl-tRNA syn 81.6 2.6 8.8E-05 47.5 7.6 95 402-517 202-307 (534)
115 2emf_A Zinc finger protein 484 81.5 0.84 2.9E-05 32.6 2.5 25 54-78 10-34 (46)
116 2lvr_A Zinc finger and BTB dom 82.2 0.3 1E-05 31.1 0.0 23 56-78 3-25 (30)
117 2eon_A ZFP-95, zinc finger pro 81.3 0.75 2.6E-05 33.0 2.2 25 54-78 10-34 (46)
118 2em7_A Zinc finger protein 224 81.2 0.86 2.9E-05 32.5 2.5 25 54-78 10-34 (46)
119 2ep1_A Zinc finger protein 484 81.1 0.76 2.6E-05 32.7 2.1 26 53-78 9-34 (46)
120 2eoj_A Zinc finger protein 268 81.0 0.72 2.5E-05 32.5 2.0 24 55-78 11-34 (44)
121 2en7_A Zinc finger protein 268 81.0 0.73 2.5E-05 32.4 2.0 25 54-78 10-34 (44)
122 2emb_A Zinc finger protein 473 81.0 0.88 3E-05 32.1 2.4 25 54-78 10-34 (44)
123 2yte_A Zinc finger protein 473 81.0 0.7 2.4E-05 32.1 1.9 24 55-78 9-32 (42)
124 2yrj_A Zinc finger protein 473 81.0 0.83 2.9E-05 32.5 2.3 26 53-78 9-34 (46)
125 2elz_A Zinc finger protein 224 80.8 0.95 3.3E-05 32.3 2.6 26 53-78 9-34 (46)
126 1sp2_A SP1F2; zinc finger, tra 80.8 0.78 2.7E-05 29.7 2.0 22 57-78 3-26 (31)
127 2en9_A Zinc finger protein 28 80.8 0.74 2.5E-05 32.9 2.0 26 53-78 9-34 (46)
128 2yth_A Zinc finger protein 224 80.7 0.92 3.2E-05 32.4 2.5 25 54-78 10-34 (46)
129 2ema_A Zinc finger protein 347 80.7 0.9 3.1E-05 32.4 2.4 26 53-78 9-34 (46)
130 2eow_A Zinc finger protein 347 80.6 0.78 2.7E-05 32.7 2.1 26 53-78 9-34 (46)
131 2emj_A Zinc finger protein 28 80.6 0.75 2.6E-05 32.9 2.0 25 54-78 10-34 (46)
132 2eq2_A Zinc finger protein 347 80.5 0.84 2.9E-05 32.6 2.2 25 54-78 10-34 (46)
133 2ytf_A Zinc finger protein 268 80.5 0.8 2.7E-05 32.6 2.1 25 54-78 10-34 (46)
134 2eoy_A Zinc finger protein 473 80.5 0.79 2.7E-05 32.8 2.1 25 54-78 10-34 (46)
135 2eor_A Zinc finger protein 224 80.4 0.77 2.6E-05 32.7 2.0 25 54-78 10-34 (46)
136 2eov_A Zinc finger protein 484 80.3 0.75 2.6E-05 32.7 1.9 25 54-78 10-34 (46)
137 2ytn_A Zinc finger protein 347 80.3 0.95 3.2E-05 32.3 2.4 25 54-78 10-34 (46)
138 2eq1_A Zinc finger protein 347 80.2 0.86 2.9E-05 32.5 2.2 26 53-78 9-34 (46)
139 2yts_A Zinc finger protein 484 80.2 0.96 3.3E-05 32.1 2.4 25 54-78 10-34 (46)
140 2ysp_A Zinc finger protein 224 80.2 0.82 2.8E-05 32.6 2.1 26 53-78 9-34 (46)
141 2el6_A Zinc finger protein 268 80.2 0.94 3.2E-05 32.4 2.4 26 53-78 9-34 (46)
142 2lce_A B-cell lymphoma 6 prote 80.1 0.87 3E-05 36.0 2.4 31 48-78 9-39 (74)
143 2em9_A Zinc finger protein 224 80.1 0.99 3.4E-05 32.1 2.5 25 54-78 10-34 (46)
144 2ep3_A Zinc finger protein 484 80.1 0.89 3.1E-05 32.4 2.2 25 54-78 10-34 (46)
145 2eme_A Zinc finger protein 473 80.0 0.96 3.3E-05 32.1 2.4 25 54-78 10-34 (46)
146 2enh_A Zinc finger protein 28 80.0 0.87 3E-05 32.6 2.2 25 54-78 10-34 (46)
147 2eop_A Zinc finger protein 268 80.0 0.89 3E-05 32.3 2.2 25 54-78 10-34 (46)
148 2emx_A Zinc finger protein 268 80.0 0.83 2.9E-05 32.2 2.0 26 53-78 7-32 (44)
149 2ytj_A Zinc finger protein 484 79.9 0.81 2.8E-05 32.6 1.9 25 54-78 10-34 (46)
150 2ytp_A Zinc finger protein 484 79.9 0.95 3.3E-05 32.3 2.3 24 55-78 11-34 (46)
151 2ep0_A Zinc finger protein 28 79.8 0.92 3.1E-05 32.3 2.2 26 53-78 9-34 (46)
152 2enf_A Zinc finger protein 347 79.8 0.92 3.1E-05 32.3 2.2 25 54-78 10-34 (46)
153 2em4_A Zinc finger protein 28 79.7 0.85 2.9E-05 32.6 2.0 25 54-78 10-34 (46)
154 2eou_A Zinc finger protein 473 79.7 0.81 2.8E-05 32.4 1.9 25 54-78 10-34 (44)
155 2ene_A Zinc finger protein 347 79.5 0.96 3.3E-05 32.2 2.3 26 53-78 9-34 (46)
156 2eml_A Zinc finger protein 28 79.5 1 3.4E-05 32.1 2.3 26 53-78 9-34 (46)
157 2em2_A Zinc finger protein 28 79.5 0.92 3.1E-05 32.4 2.1 26 53-78 9-34 (46)
158 2eoo_A ZFP-95, zinc finger pro 79.5 0.9 3.1E-05 32.5 2.1 26 53-78 9-34 (46)
159 2eom_A ZFP-95, zinc finger pro 79.4 0.81 2.8E-05 32.8 1.8 25 54-78 10-34 (46)
160 2emy_A Zinc finger protein 268 79.4 0.89 3.1E-05 32.4 2.0 26 53-78 9-34 (46)
161 2epr_A POZ-, at HOOK-, and zin 79.4 1.1 3.7E-05 32.5 2.5 26 53-78 9-34 (48)
162 1zfd_A SWI5; DNA binding motif 79.3 0.86 3E-05 29.6 1.8 22 57-78 4-27 (32)
163 2eq4_A Zinc finger protein 224 79.3 0.89 3E-05 32.3 2.0 25 54-78 10-34 (46)
164 2em0_A Zinc finger protein 224 79.2 1.1 3.7E-05 32.0 2.4 25 54-78 10-34 (46)
165 2em6_A Zinc finger protein 224 79.2 1 3.5E-05 32.2 2.3 25 54-78 10-34 (46)
166 2epz_A Zinc finger protein 28 78.9 1 3.4E-05 32.1 2.2 25 54-78 10-34 (46)
167 2emz_A ZFP-95, zinc finger pro 78.9 0.87 3E-05 32.6 1.8 25 54-78 10-34 (46)
168 2em8_A Zinc finger protein 224 78.9 0.96 3.3E-05 32.3 2.1 26 53-78 9-34 (46)
169 2em3_A Zinc finger protein 28 78.8 0.91 3.1E-05 32.4 1.9 24 55-78 11-34 (46)
170 2yso_A ZFP-95, zinc finger pro 78.8 0.96 3.3E-05 32.2 2.1 26 53-78 9-34 (46)
171 2emm_A ZFP-95, zinc finger pro 78.8 0.94 3.2E-05 32.2 2.0 25 54-78 10-34 (46)
172 2en1_A Zinc finger protein 224 78.7 1.1 3.8E-05 31.9 2.4 26 53-78 9-34 (46)
173 2en6_A Zinc finger protein 268 78.7 0.93 3.2E-05 32.3 1.9 26 53-78 9-34 (46)
174 2epu_A Zinc finger protein 32; 78.6 0.99 3.4E-05 32.1 2.1 25 54-78 10-34 (45)
175 2ytt_A Zinc finger protein 473 78.4 0.86 2.9E-05 32.6 1.7 25 54-78 10-34 (46)
176 2eoz_A Zinc finger protein 473 78.3 0.92 3.1E-05 32.4 1.8 25 54-78 10-34 (46)
177 2eq3_A Zinc finger protein 347 78.2 0.99 3.4E-05 32.1 2.0 25 54-78 10-34 (46)
178 2epx_A Zinc finger protein 28 78.2 1.1 3.8E-05 31.9 2.2 25 53-77 9-33 (47)
179 2ytq_A Zinc finger protein 268 78.2 1.1 3.7E-05 32.0 2.2 25 54-78 10-34 (46)
180 2yu5_A Zinc finger protein 473 78.1 0.89 3E-05 32.1 1.7 25 54-78 10-34 (44)
181 2enc_A Zinc finger protein 224 78.1 1.1 3.7E-05 32.0 2.1 26 53-78 9-34 (46)
182 2odr_B Phosphoseryl-tRNA synth 78.1 6.1 0.00021 45.4 9.2 97 402-517 221-318 (648)
183 2eoe_A Zinc finger protein 347 78.1 1.1 3.7E-05 31.9 2.1 25 54-78 10-34 (46)
184 2yti_A Zinc finger protein 347 78.0 0.94 3.2E-05 32.3 1.8 24 55-78 11-34 (46)
185 2ytr_A Zinc finger protein 347 78.0 0.91 3.1E-05 32.3 1.7 25 54-78 10-34 (46)
186 2emk_A Zinc finger protein 28 78.0 0.99 3.4E-05 32.3 1.9 25 54-78 10-34 (46)
187 2emh_A Zinc finger protein 484 78.0 1 3.5E-05 32.1 2.0 25 54-78 10-34 (46)
188 2eoh_A Zinc finger protein 28 78.0 1 3.5E-05 32.2 2.0 25 54-78 10-34 (46)
189 2emp_A Zinc finger protein 347 77.9 1 3.5E-05 32.1 2.0 26 53-78 9-34 (46)
190 2odr_A Phosphoseryl-tRNA synth 77.9 6.2 0.00021 45.4 9.2 97 402-517 221-318 (665)
191 2ep2_A Zinc finger protein 484 77.9 1.1 3.7E-05 31.9 2.1 25 54-78 10-34 (46)
192 2ytd_A Zinc finger protein 473 77.8 1 3.6E-05 32.0 2.0 26 53-78 9-34 (46)
193 2ytm_A Zinc finger protein 28 77.8 0.96 3.3E-05 32.4 1.8 25 54-78 10-34 (46)
194 1yui_A GAGA-factor; complex (D 77.6 1 3.6E-05 33.5 2.0 24 55-78 23-46 (54)
195 2yto_A Zinc finger protein 484 77.5 1.1 3.7E-05 32.0 2.0 24 55-78 11-34 (46)
196 2ytk_A Zinc finger protein 347 77.5 1.1 3.7E-05 32.0 2.0 26 53-78 9-34 (46)
197 2odr_D Phosphoseryl-tRNA synth 77.4 6.5 0.00022 45.4 9.2 97 402-517 221-318 (685)
198 2eq0_A Zinc finger protein 347 77.4 1.2 4.3E-05 31.6 2.3 25 54-78 10-34 (46)
199 3uk3_C Zinc finger protein 217 77.3 0.93 3.2E-05 33.6 1.7 25 54-78 2-26 (57)
200 2odr_C Phosphoseryl-tRNA synth 77.3 6.6 0.00022 45.4 9.2 97 402-517 221-318 (701)
201 2eoq_A Zinc finger protein 224 77.1 1 3.5E-05 32.1 1.8 26 53-78 9-34 (46)
202 2ytg_A ZFP-95, zinc finger pro 77.0 1 3.5E-05 32.1 1.7 25 54-78 10-34 (46)
203 3iuf_A Zinc finger protein UBI 76.9 1.2 4E-05 32.7 2.1 24 54-77 5-28 (48)
204 2en8_A Zinc finger protein 224 76.8 1.3 4.4E-05 31.5 2.2 25 54-78 10-34 (46)
205 4gzn_C ZFP-57, zinc finger pro 76.8 1.4 4.6E-05 34.9 2.5 24 55-78 31-54 (60)
206 2eox_A Zinc finger protein 473 76.7 0.88 3E-05 32.1 1.3 25 54-78 10-34 (44)
207 2yu8_A Zinc finger protein 347 76.6 1 3.6E-05 32.0 1.7 25 54-78 10-34 (46)
208 2eln_A Zinc finger protein 406 76.4 1.2 4.3E-05 32.0 2.1 24 55-78 8-33 (38)
209 2epw_A Zinc finger protein 268 75.9 1.1 3.8E-05 31.8 1.7 25 54-78 10-34 (46)
210 1va1_A Transcription factor SP 75.8 1.5 5.3E-05 29.8 2.3 26 53-78 5-32 (37)
211 2kfq_A FP1; protein, de novo p 75.7 0.27 9.3E-06 32.7 -1.6 22 57-78 3-24 (32)
212 2ely_A Zinc finger protein 224 75.7 1 3.6E-05 32.1 1.5 25 54-78 10-34 (46)
213 2rhq_B Phenylalanyl-tRNA synth 75.4 4.6 0.00016 47.5 7.6 135 318-483 498-639 (795)
214 2en3_A ZFP-95, zinc finger pro 75.3 1.2 4E-05 31.7 1.7 24 55-78 11-34 (46)
215 2drp_A Protein (tramtrack DNA- 73.9 1.3 4.4E-05 33.9 1.7 26 53-78 7-32 (66)
216 1f2i_G Fusion of N-terminal 17 73.7 1.6 5.6E-05 34.1 2.3 22 57-78 50-71 (73)
217 3uk3_C Zinc finger protein 217 73.6 1.6 5.4E-05 32.3 2.1 23 56-78 32-54 (57)
218 3l4g_B Phenylalanyl-tRNA synth 73.2 17 0.00057 41.3 11.3 129 319-480 397-526 (589)
219 3hnw_A Uncharacterized protein 72.4 33 0.0011 31.8 11.2 69 185-254 66-134 (138)
220 2epq_A POZ-, at HOOK-, and zin 72.1 1.6 5.3E-05 31.0 1.6 24 55-78 9-32 (45)
221 2drp_A Protein (tramtrack DNA- 72.0 1.7 5.8E-05 33.3 2.0 25 54-78 38-62 (66)
222 2epp_A POZ-, at HOOK-, and zin 72.0 1.8 6.2E-05 35.1 2.2 24 55-78 12-35 (66)
223 4gzn_C ZFP-57, zinc finger pro 71.7 1.6 5.4E-05 34.5 1.7 22 57-78 5-26 (60)
224 1bhi_A CRE-BP1, ATF-2; CRE bin 71.1 2 7E-05 29.0 2.0 25 54-78 4-30 (38)
225 1x6e_A Zinc finger protein 24; 69.9 2.2 7.5E-05 33.5 2.2 26 53-78 11-36 (72)
226 2wbs_A Krueppel-like factor 4; 69.5 2.5 8.6E-05 34.0 2.6 24 55-78 64-87 (89)
227 2d9h_A Zinc finger protein 692 69.4 2.1 7.1E-05 34.0 2.0 26 53-78 4-29 (78)
228 1x5w_A Zinc finger protein 64, 69.2 2.5 8.4E-05 32.9 2.4 26 53-78 6-31 (70)
229 2kmk_A Zinc finger protein GFI 69.2 2.1 7.3E-05 33.7 2.0 24 55-78 56-79 (82)
230 1x5w_A Zinc finger protein 64, 68.6 2.2 7.7E-05 33.1 2.0 24 55-78 36-59 (70)
231 2eps_A POZ-, at HOOK-, and zin 68.4 2.6 8.9E-05 31.4 2.3 26 52-77 8-33 (54)
232 2adr_A ADR1; transcription reg 68.1 2.2 7.4E-05 32.0 1.8 22 57-78 3-24 (60)
233 1bbo_A Human enhancer-binding 67.2 2.3 7.7E-05 31.4 1.7 22 57-78 2-23 (57)
234 3hnw_A Uncharacterized protein 67.1 49 0.0017 30.7 11.1 68 180-248 68-135 (138)
235 2dmd_A Zinc finger protein 64, 67.1 2.9 9.9E-05 34.2 2.5 26 53-78 5-30 (96)
236 1a1h_A QGSR zinc finger peptid 66.8 2.9 0.0001 33.6 2.5 24 55-78 61-84 (90)
237 2ebt_A Krueppel-like factor 5; 66.6 2.4 8.2E-05 34.9 1.9 24 55-78 74-97 (100)
238 1x6e_A Zinc finger protein 24; 66.5 2.7 9.2E-05 32.9 2.1 23 56-78 42-64 (72)
239 2epa_A Krueppel-like factor 10 65.8 4 0.00014 31.7 3.0 30 49-78 10-41 (72)
240 2lce_A B-cell lymphoma 6 prote 65.0 2.8 9.6E-05 32.9 1.9 24 55-78 44-67 (74)
241 2yt9_A Zinc finger-containing 64.0 2.9 0.0001 34.1 1.9 26 53-78 4-29 (95)
242 2ct1_A Transcriptional repress 63.5 2.9 9.8E-05 33.1 1.7 24 56-79 45-68 (77)
243 2ebt_A Krueppel-like factor 5; 62.9 4.2 0.00014 33.4 2.7 31 48-78 7-39 (100)
244 2dmd_A Zinc finger protein 64, 62.8 3.7 0.00013 33.5 2.3 24 55-78 63-86 (96)
245 2ent_A Krueppel-like factor 15 61.7 4.4 0.00015 28.7 2.3 25 54-78 10-36 (48)
246 3mjh_B Early endosome antigen 61.6 3.4 0.00012 29.8 1.6 23 57-79 6-28 (34)
247 2adr_A ADR1; transcription reg 61.2 4.1 0.00014 30.4 2.2 23 55-77 29-51 (60)
248 2cot_A Zinc finger protein 435 60.7 4.6 0.00016 31.9 2.5 24 55-78 45-68 (77)
249 2cot_A Zinc finger protein 435 60.6 4.1 0.00014 32.2 2.2 26 53-78 15-40 (77)
250 2kmk_A Zinc finger protein GFI 60.6 3.9 0.00013 32.1 2.1 24 55-78 28-51 (82)
251 2ct1_A Transcriptional repress 60.4 3.9 0.00013 32.3 2.0 25 54-78 13-37 (77)
252 1ncs_A Peptide M30F, transcrip 60.3 2.7 9.4E-05 30.4 1.0 26 53-78 15-42 (47)
253 2gqj_A Zinc finger protein KIA 60.0 3.3 0.00011 34.8 1.5 26 53-78 21-47 (98)
254 2lv2_A Insulinoma-associated p 59.9 4.1 0.00014 34.4 2.1 24 55-78 27-50 (85)
255 2f23_A Anti-cleavage anti-GREA 59.8 40 0.0014 31.5 9.2 60 189-255 12-71 (156)
256 2csh_A Zinc finger protein 297 59.4 4 0.00014 34.3 2.1 26 53-78 62-87 (110)
257 2ghf_A ZHX1, zinc fingers and 58.9 4.8 0.00016 35.1 2.5 29 49-77 11-39 (102)
258 2dlq_A GLI-kruppel family memb 58.7 4.1 0.00014 34.7 2.0 27 52-78 3-29 (124)
259 2csh_A Zinc finger protein 297 58.5 4.2 0.00014 34.2 2.0 25 53-78 7-31 (110)
260 2p4v_A Transcription elongatio 58.2 38 0.0013 31.9 8.8 60 188-254 10-70 (158)
261 1a1h_A QGSR zinc finger peptid 57.7 4.6 0.00016 32.4 2.0 24 55-78 33-56 (90)
262 2d9h_A Zinc finger protein 692 57.5 4.9 0.00017 31.7 2.2 24 55-78 37-60 (78)
263 1f2i_G Fusion of N-terminal 17 57.0 5.4 0.00018 31.0 2.3 31 48-78 11-43 (73)
264 1llm_C Chimera of ZIF23-GCN4; 56.8 4.9 0.00017 32.6 2.1 25 55-79 30-54 (88)
265 2ctd_A Zinc finger protein 512 56.4 3.8 0.00013 34.8 1.4 24 55-78 33-57 (96)
266 2eod_A TNF receptor-associated 56.3 5.1 0.00017 30.9 2.0 25 53-78 7-31 (66)
267 2dmi_A Teashirt homolog 3; zin 56.3 4.4 0.00015 34.4 1.7 29 54-82 78-106 (115)
268 2ee8_A Protein ODD-skipped-rel 55.8 4.2 0.00014 33.9 1.5 23 55-77 72-94 (106)
269 1x6h_A Transcriptional repress 55.3 5.4 0.00019 31.7 2.1 24 55-78 14-37 (86)
270 1x6h_A Transcriptional repress 55.1 4.8 0.00016 32.0 1.7 24 55-78 46-69 (86)
271 2wbt_A B-129; zinc finger; 2.7 55.1 3.9 0.00013 35.6 1.2 25 54-78 72-96 (129)
272 2gqj_A Zinc finger protein KIA 54.8 4.1 0.00014 34.2 1.3 23 56-78 54-76 (98)
273 1x3c_A Zinc finger protein 292 54.7 5.4 0.00018 33.5 1.9 25 53-77 24-50 (73)
274 2jp9_A Wilms tumor 1; DNA bind 53.8 5.6 0.00019 33.6 2.0 25 54-78 64-88 (119)
275 1llm_C Chimera of ZIF23-GCN4; 53.7 5.1 0.00018 32.5 1.7 23 56-78 3-25 (88)
276 2lv2_A Insulinoma-associated p 53.5 6 0.00021 33.3 2.1 23 56-78 56-78 (85)
277 1wjp_A Zinc finger protein 295 52.4 6.5 0.00022 33.0 2.2 26 53-78 13-38 (107)
278 2dmi_A Teashirt homolog 3; zin 52.1 6.6 0.00023 33.3 2.2 26 53-78 16-41 (115)
279 2yt9_A Zinc finger-containing 52.0 6.2 0.00021 32.0 1.9 24 55-78 34-57 (95)
280 2eod_A TNF receptor-associated 51.7 4.6 0.00016 31.1 1.0 26 53-78 33-59 (66)
281 2lt7_A Transcriptional regulat 51.7 5.4 0.00019 36.0 1.7 26 53-78 19-44 (133)
282 1fu9_A U-shaped transcriptiona 51.1 6.3 0.00021 28.8 1.5 23 55-77 7-29 (36)
283 1x3z_A Peptide: N-glycanase; h 50.7 14 0.00048 39.3 4.8 109 463-599 185-293 (335)
284 1ubd_C Protein (YY1 zinc finge 50.6 8 0.00027 33.1 2.5 25 54-78 32-56 (124)
285 1wjp_A Zinc finger protein 295 50.6 6.2 0.00021 33.1 1.8 24 54-77 67-90 (107)
286 2ee8_A Protein ODD-skipped-rel 50.4 8.4 0.00029 32.0 2.5 24 55-78 44-67 (106)
287 3ig2_A Phenylalanyl-tRNA synth 50.2 30 0.001 33.8 6.9 129 329-479 19-154 (213)
288 3ica_A Phenylalanyl-tRNA synth 50.2 47 0.0016 32.3 8.3 128 329-479 19-154 (213)
289 1grj_A GREA protein; transcrip 50.1 55 0.0019 30.7 8.4 60 188-254 10-70 (158)
290 2czr_A TBP-interacting protein 49.6 5.1 0.00017 39.2 1.2 36 56-94 153-189 (226)
291 2e72_A POGO transposable eleme 49.0 10 0.00035 29.4 2.5 25 53-77 9-33 (49)
292 2ctd_A Zinc finger protein 512 48.9 7.3 0.00025 33.0 1.9 23 55-77 61-84 (96)
293 2dlq_A GLI-kruppel family memb 48.5 8 0.00027 32.8 2.2 26 53-78 63-88 (124)
294 3na7_A HP0958; flagellar bioge 48.1 1.3E+02 0.0043 30.2 11.3 30 224-253 91-120 (256)
295 2dlk_A Novel protein; ZF-C2H2 48.1 8.2 0.00028 30.2 2.0 23 56-78 38-62 (79)
296 2wbs_A Krueppel-like factor 4; 47.9 8.7 0.0003 30.7 2.2 25 54-78 3-29 (89)
297 1x6f_A Zinc finger protein 462 47.7 8.7 0.0003 32.3 2.2 26 53-78 22-47 (88)
298 1b7y_B Phers, protein (phenyla 46.9 49 0.0017 38.9 9.1 130 316-483 492-627 (785)
299 3lay_A Zinc resistance-associa 46.5 2E+02 0.007 27.6 11.9 40 176-215 67-106 (175)
300 2lt7_A Transcriptional regulat 46.4 8.4 0.00029 34.7 2.0 23 56-78 78-100 (133)
301 2yy0_A C-MYC-binding protein; 46.3 34 0.0012 26.8 5.2 33 222-254 18-50 (53)
302 2ej4_A Zinc finger protein ZIC 45.8 6.9 0.00024 31.9 1.3 22 57-78 63-84 (95)
303 2epa_A Krueppel-like factor 10 45.6 10 0.00036 29.3 2.2 24 55-78 46-71 (72)
304 2w83_C C-JUN-amino-terminal ki 44.5 1.4E+02 0.0047 25.3 8.8 66 180-253 9-74 (77)
305 2j7j_A Transcription factor II 44.1 10 0.00036 29.7 2.1 23 56-78 31-55 (85)
306 3d5a_X RF1, peptide chain rele 44.0 1.5E+02 0.0051 31.7 11.4 93 161-265 10-102 (354)
307 2i13_A AART; DNA binding, zinc 43.6 11 0.00036 35.0 2.3 23 56-78 161-183 (190)
308 2jp9_A Wilms tumor 1; DNA bind 43.5 11 0.00036 31.8 2.1 24 55-78 93-118 (119)
309 1x79_B RAB GTPase binding effe 43.2 1.7E+02 0.0057 26.4 9.9 33 180-212 6-38 (112)
310 3u1c_A Tropomyosin alpha-1 cha 42.4 1.6E+02 0.0055 25.6 9.7 34 180-213 23-56 (101)
311 2wbt_A B-129; zinc finger; 2.7 42.3 9.5 0.00033 33.0 1.7 22 57-78 101-122 (129)
312 3u59_A Tropomyosin beta chain; 42.3 1.6E+02 0.0056 25.4 9.7 50 164-213 5-56 (101)
313 2zqm_A Prefoldin beta subunit 41.2 1.7E+02 0.006 25.2 12.1 78 181-258 14-112 (117)
314 1zbt_A RF-1, peptide chain rel 39.9 43 0.0015 36.1 6.5 104 153-265 16-120 (371)
315 2i13_A AART; DNA binding, zinc 38.9 9.7 0.00033 35.3 1.2 27 52-78 17-43 (190)
316 3uul_A Utrophin; spectrin repe 38.3 1.8E+02 0.0061 24.4 14.4 81 175-256 31-111 (118)
317 2j7j_A Transcription factor II 37.9 13 0.00045 29.1 1.7 22 57-78 2-25 (85)
318 2jee_A YIIU; FTSZ, septum, coi 36.9 2E+02 0.0067 24.6 11.5 58 187-259 20-77 (81)
319 2lw1_A ABC transporter ATP-bin 36.9 1.9E+02 0.0065 24.4 9.6 63 187-251 22-84 (89)
320 3oja_A Leucine-rich immune mol 36.8 3.1E+02 0.01 29.4 13.0 34 224-257 443-476 (487)
321 2dlk_A Novel protein; ZF-C2H2 36.5 16 0.00055 28.4 2.1 25 53-77 4-30 (79)
322 2ghf_A ZHX1, zinc fingers and 36.3 14 0.00047 32.1 1.7 23 55-77 49-72 (102)
323 3ghg_A Fibrinogen alpha chain; 36.0 44 0.0015 37.5 5.9 68 182-257 87-158 (562)
324 3qh9_A Liprin-beta-2; coiled-c 35.9 2E+02 0.007 24.5 9.3 31 182-212 21-51 (81)
325 2ej4_A Zinc finger protein ZIC 35.8 15 0.00051 29.8 1.8 23 56-78 25-47 (95)
326 2dfs_A Myosin-5A; myosin-V, in 35.7 1.6E+02 0.0053 36.0 11.3 24 228-251 1021-1044(1080)
327 2rpc_A Zinc finger protein ZIC 35.7 15 0.00053 32.6 2.0 25 54-78 23-47 (155)
328 1gqe_A Release factor 2, RF2; 35.1 1.2E+02 0.0043 32.4 9.2 57 151-207 22-78 (365)
329 2gli_A Protein (five-finger GL 34.2 18 0.00061 32.0 2.2 23 56-78 128-152 (155)
330 2fcw_A Alpha-2-macroglobulin r 34.1 2.6E+02 0.0089 25.1 12.2 81 175-258 19-102 (109)
331 3na7_A HP0958; flagellar bioge 32.9 3.6E+02 0.012 26.8 11.9 29 233-261 146-174 (256)
332 3uun_A Dystrophin; triple heli 32.5 2.2E+02 0.0075 23.8 14.2 82 175-257 31-112 (119)
333 3tnu_B Keratin, type II cytosk 31.3 2.9E+02 0.0099 24.8 11.6 34 180-213 36-69 (129)
334 3tnu_A Keratin, type I cytoske 30.9 3E+02 0.01 24.8 10.4 34 180-213 38-71 (131)
335 3bas_A Myosin heavy chain, str 30.1 2.5E+02 0.0087 23.8 9.4 27 183-209 17-43 (89)
336 2jee_A YIIU; FTSZ, septum, coi 29.7 2.6E+02 0.009 23.8 10.8 27 180-206 20-46 (81)
337 1vd4_A Transcription initiatio 29.4 7.6 0.00026 29.8 -1.0 19 56-74 39-57 (62)
338 1fxk_A Prefoldin; archaeal pro 29.4 2.6E+02 0.0089 23.7 12.3 76 180-255 8-97 (107)
339 3mq7_A Bone marrow stromal ant 29.4 2.8E+02 0.0095 25.2 9.0 28 226-253 74-101 (121)
340 1tf6_A Protein (transcription 28.5 24 0.00083 32.5 2.1 24 55-78 133-158 (190)
341 2yrk_A Zinc finger homeobox pr 28.3 22 0.00075 28.3 1.4 39 49-90 9-47 (55)
342 3oja_B Anopheles plasmodium-re 28.0 4E+02 0.014 29.1 12.2 36 228-263 549-584 (597)
343 3uux_B Mitochondrial division 27.4 3.6E+02 0.012 27.3 10.4 21 192-212 161-181 (242)
344 2ke4_A CDC42-interacting prote 27.4 2.7E+02 0.0091 24.3 8.4 69 182-253 17-85 (98)
345 1ubd_C Protein (YY1 zinc finge 27.2 28 0.00096 29.5 2.1 24 55-78 4-29 (124)
346 2rpc_A Zinc finger protein ZIC 26.7 25 0.00087 31.1 1.8 23 55-77 119-143 (155)
347 1tf6_A Protein (transcription 26.3 31 0.0011 31.8 2.4 26 53-78 101-128 (190)
348 1vd4_A Transcription initiatio 26.2 17 0.00058 27.8 0.5 21 53-73 11-31 (62)
349 2gd5_A Charged multivesicular 26.0 4.2E+02 0.014 25.0 10.4 75 182-256 16-90 (179)
350 1v5s_A MAP/microtubule affinit 25.1 64 0.0022 29.6 4.2 48 464-511 41-94 (126)
351 2dfs_A Myosin-5A; myosin-V, in 24.9 2.2E+02 0.0076 34.6 10.0 14 75-88 896-909 (1080)
352 2ctu_A Zinc finger protein 483 24.9 5 0.00017 30.7 -2.9 24 55-78 38-61 (73)
353 2gli_A Protein (five-finger GL 24.7 29 0.00099 30.6 1.8 23 56-78 3-25 (155)
354 4dnd_A Syntaxin-10, SYN10; str 24.4 3.6E+02 0.012 24.5 9.1 101 145-245 21-127 (130)
355 2wt7_B Transcription factor MA 22.9 83 0.0028 27.3 4.2 50 166-215 29-83 (90)
356 3oja_B Anopheles plasmodium-re 22.9 3E+02 0.01 30.1 10.0 26 229-254 557-582 (597)
357 4dzn_A Coiled-coil peptide CC- 22.7 1.6E+02 0.0055 20.4 4.7 24 226-249 5-28 (33)
358 4h22_A Leucine-rich repeat fli 22.4 2.2E+02 0.0075 25.3 6.9 76 180-256 2-77 (103)
359 4f9c_B Protein DBF4 homolog A; 22.4 30 0.001 32.4 1.4 37 58-100 89-125 (144)
360 3bas_A Myosin heavy chain, str 22.4 3.6E+02 0.012 22.8 9.8 28 182-209 30-57 (89)
361 3v86_A De novo design helix; c 22.1 1.3E+02 0.0044 20.1 4.0 18 229-246 6-23 (27)
362 1deq_A Fibrinogen (alpha chain 21.4 3.3E+02 0.011 29.4 9.3 65 181-253 89-157 (390)
363 2xzm_5 Ribosomal protein S26E 21.2 17 0.00057 33.2 -0.6 14 54-67 71-84 (119)
364 3gp4_A Transcriptional regulat 21.1 4.6E+02 0.016 23.7 9.3 24 164-187 47-70 (142)
365 3o0z_A RHO-associated protein 20.9 5.6E+02 0.019 24.6 10.9 29 183-211 44-72 (168)
366 1gmj_A ATPase inhibitor; coile 20.5 3.3E+02 0.011 23.4 7.3 11 196-206 39-49 (84)
367 2fxo_A Myosin heavy chain, car 20.5 4.6E+02 0.016 23.4 10.1 22 189-210 36-57 (129)
No 1
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=100.00 E-value=3.5e-83 Score=707.39 Aligned_cols=350 Identities=12% Similarity=0.158 Sum_probs=317.6
Q ss_pred ccchHHhhcCH--HHHHHHHHhcCCCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----------
Q psy10095 153 SYDVKHVLENE--DLIVNQLKQRRIDIS-EFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSK---------- 219 (680)
Q Consensus 153 mLD~k~i~~n~--e~v~~~l~~R~~~~d-ld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~---------- 219 (680)
|||+++||+|+ +.|++++++|+.+++ +|+|+++|++||+++.++++|+++||++|++|+++++.++.
T Consensus 7 mldi~~~r~~~~~~~v~~~~~~R~~~~~~~d~~~~ld~~~r~~~~~~~~l~~~rN~~sk~i~~~~~~~~~~~~~~~~~~~ 86 (484)
T 3lss_A 7 VLDIQLFRDETGANIIRESQRRRFADPDIVDAIIEADKKWRRTQFLTEASKKLINICSKAVGAKKKAKEADGDTSEIPPQ 86 (484)
T ss_dssp CCCGGGGGSHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----------
T ss_pred cccHHHHHcCCCHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc
Confidence 89999999995 999999999999887 79999999999999999999999999999999998763210
Q ss_pred ---------CChhhHHHH----HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCC-----CeeEE-e-
Q psy10095 220 ---------LEPSQLEKK----YLE-RKQLKAEIKKFDSFMLDYQRNVIIKVLKLPNYLDNSTPEVY-----ETIYE-Y- 278 (680)
Q Consensus 220 ---------~e~~e~e~l----~~~-~k~Lk~elk~Le~~l~~le~~l~~~~l~LPN~~h~~VP~~~-----n~vv~-~- 278 (680)
...++.+++ +++ +++|+++|++|++++.++++++..+++.|||++||+||.+. |++++ |
T Consensus 87 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~i~~le~~~~~~~~~~~~~l~~iPN~~~~~vP~g~~e~~~n~~v~~~g 166 (484)
T 3lss_A 87 VKEAYENGTLKGEQVEQLCVLQLKQLSKDLSDQVAGLAKEAQQLEEERDKLMLNVGNILHESVPIAQDEETGNTVVRTFG 166 (484)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCTTSCCCSCHHHHCEEEEEES
T ss_pred ccccccccccchhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccCCCCCCcccCcEEEEecC
Confidence 011345667 888 99999999999999999999999999999999999999652 77776 4
Q ss_pred -CCCCCCCChhhhhhcCCccccc-------CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhc
Q psy10095 279 -DPDREGKNKIDMDALSKYVQYT-------NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYG 350 (680)
Q Consensus 279 -~p~~~~~~H~elg~~l~l~D~~-------~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G 350 (680)
.|.|++++|++||+++|||||+ |++||||+|.||+|++||++|++|.+. ++||++|++|+||+.+++++||
T Consensus 167 ~~~~~~~rdH~~Lg~~l~l~df~~~a~k~sGsgf~~~~p~GarL~~aL~~f~~d~~~-~~Gy~eV~~P~lv~~~l~~~sG 245 (484)
T 3lss_A 167 NTTKRAKLNHVSIMERLGMMDTSKAVTSMAGGRSYVLKGGLVQLQVALVSYSLDFLV-KRGYTPFYPPFFLNRDVMGEVA 245 (484)
T ss_dssp CTTCCCSSCHHHHHHHTTCEECSHHHHHHHCTTCCEEEHHHHHHHHHHHHHHHHHHH-TTTCEEEECCSEEEHHHHHHHS
T ss_pred CCCCCCCCCHHHHHhhCCceeccccccccCCceEEEECCHHHHHHHHHHHHHHHHHH-HcCCEEEecCccccHHHHHhcC
Confidence 4467899999999999999995 689999999999999999999999876 5799999999999999999999
Q ss_pred CCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCC
Q psy10095 351 DHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSK 430 (680)
Q Consensus 351 ~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~ 430 (680)
++|+|.+++|.+.. .++++||+||+| +|++++|+++++...+||++|+++|+|||. |+||+
T Consensus 246 ~~~~f~e~mf~v~~----------~~~~~~L~PTaE-~~l~~l~~~~i~sy~dLPlr~~~~s~cFR~--------Eags~ 306 (484)
T 3lss_A 246 QLSQFDEELYQVSG----------DGDKKYLIATSE-MPIAAYHRGRWFTELKEPLKYAGMSTCFRK--------EAGAH 306 (484)
T ss_dssp CHHHHHHTCCEEES----------SSSCEEECSSTH-HHHHHHTTTCEESCCSSCEEEEEEEEEECC--------CTTCS
T ss_pred CcccccccceEeec----------CCcceEEeccCc-HHHHHHHhccccchhhCCeeEEeecCccCC--------CCCcC
Confidence 99999999998873 135799999997 899999999999999999999996666655 57999
Q ss_pred CCCcccchhhhccceEEEEEecCChhH--HHHHHHHHHHHHHHHHHHcCCceEEeecCCCCCCcccccceeeeeeecCCC
Q psy10095 431 HSRVENLYNSIQREKVNLFVGTNNHEN--LCKEFQNIQSLLKSVMDKLNMKYRICKAPADVLHTSESHRLEYQVYSYSLN 508 (680)
Q Consensus 431 G~dtrGL~RvHQF~KVE~f~~~~~pe~--S~~~~eeml~~~e~il~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~ 508 (680)
|+|++||||||||+|||||+|| +|++ |+++|++|++++++||+.||||||||.+||||||++|+++||||||||+++
T Consensus 307 Grdt~GL~RvrqF~kvE~~~f~-~pe~~~s~~e~e~~~~~~e~il~~LGLpyrvv~l~tgdlg~~a~~~yDiE~w~P~~~ 385 (484)
T 3lss_A 307 GRDTLGIFRVHQFDKIEQFVVC-SPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSGALNNAAAKKYDLEAWFPASG 385 (484)
T ss_dssp SSCCSTTSSCSEEEEEEEEEEE-CSSTTHHHHHHHHHHHHHHHHHHHHTCCEEEEECCTTTCCSSCSEEEEEEEEETTTT
T ss_pred CcccCCcceeeeEEEEEEEEEe-CcchHHHHHHHHHHHHHHHHHHHHcCCcEEEEEcCCcccCCchhheechheecCCCC
Confidence 9999999999999999999999 8998 999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeecCcchhhh
Q psy10095 509 SWVTCMDLNAKVYIQ 523 (680)
Q Consensus 509 ~Y~EisS~Sn~~~~q 523 (680)
.|+||||||||+++|
T Consensus 386 ~~~EIsS~Snc~dyq 400 (484)
T 3lss_A 386 AFRELVSCSNCTDYQ 400 (484)
T ss_dssp EEEEEEEEEECTTHH
T ss_pred CeeEEEEecCccccc
Confidence 999999999999999
No 2
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=100.00 E-value=1.4e-82 Score=702.31 Aligned_cols=345 Identities=11% Similarity=0.123 Sum_probs=315.7
Q ss_pred ccchHHhhc----CHHHHHHHHHhcCCCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHH
Q psy10095 153 SYDVKHVLE----NEDLIVNQLKQRRIDIS-EFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEK 227 (680)
Q Consensus 153 mLD~k~i~~----n~e~v~~~l~~R~~~~d-ld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~ 227 (680)
|||+++||+ |+|.|++++++|+.+++ +|+|+++|++||+++.++++|+++||++|++|++++++++ +.++
T Consensus 1 Mldi~~ir~~~~~n~~~v~~~~~~R~~~~~~~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~-----~~~~ 75 (485)
T 3qne_A 1 MLDINAFLVEKGGDPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKE-----DAKD 75 (485)
T ss_dssp CCCGGGGCGGGTCCHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCHH
T ss_pred CCChHHHhccCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-----cHHH
Confidence 899999999 99999999999999885 8999999999999999999999999999999999877553 3577
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC----CCeeEE-e--CC------------CCCCCChh
Q psy10095 228 KYLERKQLKAEIKKFDSFMLDYQRNVIIKVLKLPNYLDNSTPEV----YETIYE-Y--DP------------DREGKNKI 288 (680)
Q Consensus 228 l~~~~k~Lk~elk~Le~~l~~le~~l~~~~l~LPN~~h~~VP~~----~n~vv~-~--~p------------~~~~~~H~ 288 (680)
+++++++|+++|++|++++.++++++..+++.|||+|||+||.+ +|++++ | .| .|++++|+
T Consensus 76 l~~~~~~l~~~i~~le~~~~~~~~~~~~~l~~iPN~~~~~vP~g~~e~~n~~v~~~g~~~~~~~~~~~~~~~~~~~~dH~ 155 (485)
T 3qne_A 76 LIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESVVDSQDEENNELVRTWTPENYKKPEQIAAATGAPAKLSHH 155 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCTTSCCCSCGGGCEEEEEECCTTCCSSSSBCTTTCCBCCSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccCCCCCCccCCEEEEEeCCCCccccccccccccCCCccCHH
Confidence 99999999999999999999999999999999999999999954 467776 4 33 24679999
Q ss_pred hhhhcCCccccc------CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEe
Q psy10095 289 DMDALSKYVQYT------NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVL 362 (680)
Q Consensus 289 elg~~l~l~D~~------~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i 362 (680)
+||+++|||||+ |++||||+|.||+|++||++|++|.+. ++||++|++|+||+.+++++||++|.|.+++|.+
T Consensus 156 elg~~l~l~df~~~~k~sGsg~~~l~p~GarL~~aL~~~~~d~~~-~~Gy~eV~~P~lv~~~l~~~sG~l~~f~eemf~v 234 (485)
T 3qne_A 156 EVLLRLDGYDPERGVRIVGHRGYFLRNYGVFLNQALINYGLSFLS-SKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKV 234 (485)
T ss_dssp HHHHHTTCEEHHHHHHHHCTTCCEECTHHHHHHHHHHHHHHHHHH-TTTCEEEECCSEEEHHHHHHHSCHHHHTTTCCEE
T ss_pred HHHhhcCCcccccccccccceeEEEecHHHHHHHHHHHHHHHHHH-HcCCEEEeCCccccHHHHhhcCCccccccceEEE
Confidence 999999999996 689999999999999999999999875 6899999999999999999999999999999988
Q ss_pred ecCCCccccccccCCCceeeccchhhhhhhhhcccccC--CCCCCceEeeeCcccCCCccccccccccCCCCCcccchhh
Q psy10095 363 VNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVN--VKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNS 440 (680)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~--~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~Rv 440 (680)
.. .++++||+||+| +|+++||+++++. ..+||++|+++|+|||. |+|++|++++|||||
T Consensus 235 ~~----------~~~~~~LipTaE-~pl~~l~~~ei~~S~y~dLPlr~~~~s~cfR~--------Eag~~Grdt~GL~Rv 295 (485)
T 3qne_A 235 ID----------GEDEKYLIATSE-QPISAYHAGEWFESPAEQLPVRYAGYSSCFRR--------EAGSHGKDAWGIFRV 295 (485)
T ss_dssp EE----------TTEEEEECSSTH-HHHHHHTTTCEESSHHHHCCEEEEEEEEEECS--------CCC-----CCSSSSC
T ss_pred eC----------CCCeEEEecccc-HHHHHHHhccccccchhcCCeeEEEecccccC--------CCCCCCccCCCceee
Confidence 63 124699999997 8999999999998 89999999996665555 579999999999999
Q ss_pred hccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCCceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecCcch
Q psy10095 441 IQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNMKYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLNAKV 520 (680)
Q Consensus 441 HQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn~~ 520 (680)
|||+|||||+|| +||+|+++|++|++.+++||+.||||||||.+||||||++|+++||||||||+++.|+||||||||+
T Consensus 296 hqF~kvE~~~f~-~pe~s~~e~e~ml~~~e~il~~LgLpyrvv~~~tgdlg~~a~~tyDiE~w~P~~~~~~Eiss~Snc~ 374 (485)
T 3qne_A 296 HAFEKIEQFVLT-EPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQQEYKELVSCSNCT 374 (485)
T ss_dssp SEEEEEEEEEEE-CGGGHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGCCTTCSEEEEEEEEETTTTEEEEEEEEEECT
T ss_pred eeeeeeeEEEEe-CHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCCcccCCchhhheeeeEeccCCCceeEEEEecCCc
Confidence 999999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhh
Q psy10095 521 YIQ 523 (680)
Q Consensus 521 ~~q 523 (680)
++|
T Consensus 375 dyq 377 (485)
T 3qne_A 375 DYQ 377 (485)
T ss_dssp THH
T ss_pred Ccc
Confidence 898
No 3
>3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens}
Probab=100.00 E-value=4.2e-81 Score=694.96 Aligned_cols=359 Identities=12% Similarity=0.133 Sum_probs=309.1
Q ss_pred ccchHHhhc----CHHHHHHHHHhcCCCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-Ch----
Q psy10095 153 SYDVKHVLE----NEDLIVNQLKQRRIDIS-EFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKL-EP---- 222 (680)
Q Consensus 153 mLD~k~i~~----n~e~v~~~l~~R~~~~d-ld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~-e~---- 222 (680)
|||+++||+ |||.|++++++|+.+.+ +|+|+++|++||+++.++++|+++||++|++|+++++++.+. ++
T Consensus 2 mld~~~~r~~~g~n~~~v~~~~~~R~~~~~~vd~~~~ld~~~r~~~~~~e~l~~~~N~~sk~ig~~~~~~~~~~~~~~~~ 81 (522)
T 3vbb_A 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSKTIGEKMKKKEPVGDDESVP 81 (522)
T ss_dssp CCCGGGSCGGGTCCHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCCCC
T ss_pred CcCHHHHhccCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhH
Confidence 899999999 99999999999998875 899999999999999999999999999999999987766421 00
Q ss_pred hhHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC-----CCeeEE-e--
Q psy10095 223 SQLEK----------------KYLERKQLKAEIKKFDSFMLDYQRNVIIKVLKLPNYLDNSTPEV-----YETIYE-Y-- 278 (680)
Q Consensus 223 ~e~e~----------------l~~~~k~Lk~elk~Le~~l~~le~~l~~~~l~LPN~~h~~VP~~-----~n~vv~-~-- 278 (680)
+.+++ +++-...|+++|+++++++.++++++..+++.|||+|||+||.+ +|++++ |
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~~~l~~iPN~~~~~vP~g~~e~~dn~~vr~~g~ 161 (522)
T 3vbb_A 82 ENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGD 161 (522)
T ss_dssp GGGCSSSSCCHHHHHTTCSSSHHHHHHHHHHSCCCCHHHHHHHHHHHHHHGGGSCCCCCTTSCCCSCHHHHCEEEEEESC
T ss_pred HHHHHHHhhhhhhhhhhhhHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCcccCcEEEEEeCC
Confidence 01111 11112247889999999999999999999999999999999965 578777 5
Q ss_pred CCCCCCCChhhhhhcCCccccc------CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCC
Q psy10095 279 DPDREGKNKIDMDALSKYVQYT------NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDH 352 (680)
Q Consensus 279 ~p~~~~~~H~elg~~l~l~D~~------~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~ 352 (680)
.|.|.+++|++||+++|||||+ |+|||||+|.||+|++||++|++|.+. ++||++|+||+||+.+++++||++
T Consensus 162 ~~~~~~rdH~eLg~~l~l~dfe~~~kvsGsgfy~l~p~GarL~raL~~f~~d~~~-~~Gy~EV~~P~lv~~el~~~sG~l 240 (522)
T 3vbb_A 162 CTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLG-SRGYIPIYTPFFMRKEVMQEVAQL 240 (522)
T ss_dssp SSCCCSCCHHHHHHHTTCEECHHHHHHHSTTCCEEETHHHHHHHHHHHHHHHHHH-HTTCEEEECCSEEEHHHHHHHSCC
T ss_pred CCCCCccCHHHHHHhcCcEecccccccCCcceEEEcCHHHHHHHHHHHHHHHHHH-HcCCEEEECCcccchHHHhhcCCc
Confidence 4467889999999999999996 589999999999999999999999875 689999999999999999999999
Q ss_pred CCCCCCceEeecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCC
Q psy10095 353 YLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHS 432 (680)
Q Consensus 353 p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~ 432 (680)
|.|.+++|.+...+.+... ...++++||+||+| +|++++|+++++...+||+||+++|+|||. |+||+|+
T Consensus 241 ~~f~eemy~v~~~g~~~~~-~~~~~~l~L~PTaE-~~l~~l~~~ei~s~~dLPlr~~~~s~cFR~--------Eags~Gr 310 (522)
T 3vbb_A 241 SQFDEELYKVIGKGSEKSD-DNSYDEKYLIATSE-QPIAALHRDEWLRPEDLPIKYAGLSTCFRQ--------EVGSHGR 310 (522)
T ss_dssp C-CCSCCCEEC-------------CCEEECSSTH-HHHHTTSTTCEECTTTCCEEEEEEEEEECS--------CCCC---
T ss_pred ccCcccceEeecCCccccc-cccCcceeEcccCc-HHHHHHHhhhecccccCCeeEEEecccccC--------CCCcCCc
Confidence 9999999988631110000 00135799999997 899999999999999999999996655555 5799999
Q ss_pred CcccchhhhccceEEEEEecCChhH--HHHHHHHHHHHHHHHHHHcCCceEEeecCCCCCCcccccceeeeeeecCCCce
Q psy10095 433 RVENLYNSIQREKVNLFVGTNNHEN--LCKEFQNIQSLLKSVMDKLNMKYRICKAPADVLHTSESHRLEYQVYSYSLNSW 510 (680)
Q Consensus 433 dtrGL~RvHQF~KVE~f~~~~~pe~--S~~~~eeml~~~e~il~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y 510 (680)
+++||||||||+|||||+|| +|++ |+++|++|++++++||+.||||||||.+||||||++|+++||||||||+++.|
T Consensus 311 dtrGL~RvhQF~kvE~~~f~-~pe~e~s~~e~e~ml~~~e~il~~LGLpyrvv~l~tgdlg~~asktyDiE~w~P~~~~y 389 (522)
T 3vbb_A 311 DTRGIFRVHQFEKIEQFVYS-SPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAF 389 (522)
T ss_dssp -CCCSSSCSEEEEEEEEEEE-CSSTTHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGCCTTCSEEEEEEEEETTTTEE
T ss_pred cCCCcceeeeeEEEEEEEEe-CCChHHHHHHHHHHHHHHHHHHHHcCCceEEEEcCCccCCCchhheeceeEecCCCCce
Confidence 99999999999999999999 8887 99999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCcchhhh
Q psy10095 511 VTCMDLNAKVYIQ 523 (680)
Q Consensus 511 ~EisS~Sn~~~~q 523 (680)
+||||||||+++|
T Consensus 390 ~EIsScSnc~Dyq 402 (522)
T 3vbb_A 390 RELVSCSNCTDYQ 402 (522)
T ss_dssp EEEEEEEECTTHH
T ss_pred eEEEEecCCCCCc
Confidence 9999999999999
No 4
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=100.00 E-value=2.3e-80 Score=689.18 Aligned_cols=371 Identities=15% Similarity=0.217 Sum_probs=332.8
Q ss_pred ccccceeeecCccccccccCCCCccchHHhhcCHHHHHHHHHhcCCCC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 130 REYCSALFITNDKLSQLCSNVSPSYDVKHVLENEDLIVNQLKQRRIDI---SEFDFTQMREKYKEFVGVEKITTELEHKL 206 (680)
Q Consensus 130 r~~ss~lyi~~~~a~~~~~~~~PmLD~k~i~~n~e~v~~~l~~R~~~~---dld~l~~l~~~~r~l~~~~~~L~~~rn~l 206 (680)
|++.|+|| ++++.+++. +||||+++||+|+|.|++++++|+++. ++|+|+++|++||+++.++++|+++||++
T Consensus 21 ~~~~~~~~---~~~~~~~~~-~pmlD~~~ir~n~~~v~~~l~~R~~~~~~~~~~~~~~ld~~~r~~~~~~~~l~~~rn~~ 96 (501)
T 1wle_A 21 RQDRNLLY---EHAREGYSA-LPLLDMESLCAYPEDAARALDLRKGELRSKDLPGIISTWQELRQLREQIRSLEEEKEAV 96 (501)
T ss_dssp ---CCHHH---HHHHTTSSC-CCCCCHHHHHHSHHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhh---hccCCcCCC-CCccCHHHHHhCHHHHHHHHHHcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999 999999987 699999999999999999999999873 47999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCC---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC---CCeeEE-e-
Q psy10095 207 VDLEQYLLVNKSKLE---PSQLEKKYLERKQLKAEIKKFDSFMLDYQRNVIIKVLKLPNYLDNSTPEV---YETIYE-Y- 278 (680)
Q Consensus 207 sk~i~~~k~~~~~~e---~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~~~~l~LPN~~h~~VP~~---~n~vv~-~- 278 (680)
|++|++++++++..+ .++.+++++++++|+++|++|++++.++++++..+++.|||++||+||.+ +|++++ |
T Consensus 97 sk~i~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~~l~~iPN~~~~~vP~g~e~~n~~v~~~g 176 (501)
T 1wle_A 97 TEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPDVPVGDESQARVLHVVG 176 (501)
T ss_dssp HHHHHHHHHHHCCTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCTTCCCSSGGGCEEEEEES
T ss_pred HHHHHHHhhcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCeEEEEeC
Confidence 999999876653211 13577899999999999999999999999999999999999999999964 356676 4
Q ss_pred -CCC--CCCCChhhhhhcCCccccc------CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhh
Q psy10095 279 -DPD--REGKNKIDMDALSKYVQYT------NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGY 349 (680)
Q Consensus 279 -~p~--~~~~~H~elg~~l~l~D~~------~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~ 349 (680)
.|. |++++|++||+++|||||+ |++||||+|.||+|++||++|++|.+. ++||++|++|+||+.+++++|
T Consensus 177 ~~~~~~f~~~dH~~Lg~~lgl~d~~~~~k~~G~g~~~l~p~GarL~~aL~~~~~d~~~-~~Gy~eV~~P~lv~~~l~~~s 255 (501)
T 1wle_A 177 DKPAFSFQPRGHLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLI-HRGFTPMTVPDLLRGVVFEGC 255 (501)
T ss_dssp CCCCCSSCCCCHHHHHHHHTCEECTTCTTTTCTTCCEEETHHHHHHHHHHHHHHHHHH-HTTCEEEECCSEECHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHhhcCceecccccccccCceEEEcChHHHHHHHHHHHHHHHHH-HcCCEEEeCCccccHHHHHhh
Confidence 333 4789999999999999986 589999999999999999999999886 689999999999999999999
Q ss_pred cCCCCCCC-CceEeecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCcccccccccc
Q psy10095 350 GDHYLSPH-DNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKT 428 (680)
Q Consensus 350 G~~p~~~~-~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaG 428 (680)
|++|++.+ ++|.+.. .+++++||+||+| +|++++|+++++...+||++|+++|+|||. |+|
T Consensus 256 G~~~~f~e~emf~v~~---------~~~~~l~L~PTaE-~~~~~l~~~~i~s~~~LPlrl~~~s~~FR~--------Ea~ 317 (501)
T 1wle_A 256 GMTPNAKPSQIYNIDP---------SRFEDLNLAGTAE-VGLAGYFMDHSVAFRDLPIRMVCSSTCYRA--------ETD 317 (501)
T ss_dssp TCCSSSSSCSSCBBCT---------TTSSSCEECSSHH-HHHHHHHTTEEEEGGGCSEEEEEEEEEECC--------CCS
T ss_pred cCCCccCccccEEEec---------CCCCeEEECCcCc-HHHHHHHhhccCCcccCCeeEEeccCcccC--------CCC
Confidence 99999988 8888763 1135799999997 899999999999999999999996666555 579
Q ss_pred CCCCCcccchhhhccceEEEEEecCCh--hHHHHHHHHHHHHHHHHHHHcCCceEEeecCCCCCCcccccceeeeeeecC
Q psy10095 429 SKHSRVENLYNSIQREKVNLFVGTNNH--ENLCKEFQNIQSLLKSVMDKLNMKYRICKAPADVLHTSESHRLEYQVYSYS 506 (680)
Q Consensus 429 s~G~dtrGL~RvHQF~KVE~f~~~~~p--e~S~~~~eeml~~~e~il~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~ 506 (680)
+|+|++||||||||+|||||+|| .| |+|+++|++|++.+++||+.||||||||.+|+||||++|+++||||||||+
T Consensus 318 -~G~d~~GL~RvhqF~kvE~~~f~-~pe~e~s~~~~e~~l~~~~~il~~LgLpyrvv~l~tgdlg~~a~~~~DiE~w~p~ 395 (501)
T 1wle_A 318 -TGKEPWGLYRVHHFTKVEMFGVT-GPGLEQSSELLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPG 395 (501)
T ss_dssp -CC--CCSSSSCSEEEEEEEEEEE-CSSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSTTTCSEEEEEEEEETT
T ss_pred -CCCCCcCceeeeeeeeeeEEEEe-CCcHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcccCCchhheecHhhcccc
Confidence 99999999999999999999999 77 699999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeeecCcchhhhHH
Q psy10095 507 LNSWVTCMDLNAKVYIQIV 525 (680)
Q Consensus 507 ~~~Y~EisS~Sn~~~~q~~ 525 (680)
++.|+||+|||||+++|..
T Consensus 396 ~~~~~Ei~s~sn~~Dfqar 414 (501)
T 1wle_A 396 RGRFGEVTSASNCTDFQSR 414 (501)
T ss_dssp TTEEEEEEEEEECTTHHHH
T ss_pred cccceeEEeccccccchhh
Confidence 9999999999999988843
No 5
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=100.00 E-value=7.9e-74 Score=631.50 Aligned_cols=343 Identities=13% Similarity=0.162 Sum_probs=318.6
Q ss_pred ccchHHhhcCHHHHHHHHHhcCC-C-CC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHH
Q psy10095 153 SYDVKHVLENEDLIVNQLKQRRI-D-IS-EFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKY 229 (680)
Q Consensus 153 mLD~k~i~~n~e~v~~~l~~R~~-~-~d-ld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~ 229 (680)
|||+++||+|+|.|++++++|+. + ++ +|+|+++|++||+++.++++|+++||++|++|+++++++. +.++++
T Consensus 1 mld~~~~r~n~~~~~~~~~~R~~~~~~~~~~~~~~l~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~-----~~~~l~ 75 (455)
T 2dq0_A 1 MLDIKLIRENPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNKIAVEIGKRRKKGE-----PVDELL 75 (455)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHTCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC-----CTHHHH
T ss_pred CCCHHHHHhCHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----cHHHHH
Confidence 89999999999999999999999 7 76 7999999999999999999999999999999999765442 457899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC----CCeeEE-e-CC---C-------------------
Q psy10095 230 LERKQLKAEIKKFDSFMLDYQRNVIIKVLKLPNYLDNSTPEV----YETIYE-Y-DP---D------------------- 281 (680)
Q Consensus 230 ~~~k~Lk~elk~Le~~l~~le~~l~~~~l~LPN~~h~~VP~~----~n~vv~-~-~p---~------------------- 281 (680)
+++++|+++|++|++++.++++++..++++|||++||+||.+ +|++++ | .| .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~~~~~vP~g~~e~~n~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (455)
T 2dq0_A 76 AKSREIVKRIGELENEVEELKKKIDYYLWRLPNITHPSVPVGKDENDNVPIRFWGKARVWKGHLERFLEQSQGKMEYEIL 155 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCTTSCCCSSGGGCEEEEEESCEEEEGGGHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccCCCCCCCCCCEEEEEcCCCCCccccchhhhcccccccccccc
Confidence 999999999999999999999999999999999999999964 467776 4 33 2
Q ss_pred -CCCCChhhhhhcCCccccc------CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCC
Q psy10095 282 -REGKNKIDMDALSKYVQYT------NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYL 354 (680)
Q Consensus 282 -~~~~~H~elg~~l~l~D~~------~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~ 354 (680)
|++++|++||+++|||||+ |++||+|+|.||+|++||++|+.+.+ .++||++|.+|.|++.+++++||+.|.
T Consensus 156 ~~~~~~H~~lg~~l~l~d~~~~~k~~g~G~~~~~p~ga~l~~aL~~~~~~~~-~~~Gy~ev~tP~l~~~~l~~~sG~~~~ 234 (455)
T 2dq0_A 156 EWKPKLHVDLLEILGGADFARAAKVSGSRFYYLLNEIVILDLALIRFALDRL-IEKGFTPVIPPYMVRRFVEEGSTSFED 234 (455)
T ss_dssp SSCCCCHHHHHHHTTCEESHHHHHHTCTTCCEEEHHHHHHHHHHHHHHHHHH-HHTTCEEEECCSEECHHHHHTTSCTTH
T ss_pred cCccCCHHHHHhcCCcEEecccccccCCCeEEECCHHHHHHHHHHHHHHHHH-HHcCCEEEeCCcccCHHHHHhcCCCCC
Confidence 6779999999999999996 68999999999999999999999988 668999999999999999999999999
Q ss_pred CCCCceEeecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCc
Q psy10095 355 SPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRV 434 (680)
Q Consensus 355 ~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dt 434 (680)
|.+++|.+.+ +++||+||++ +|++++|+++++...+||+||+++|+|||. |+|++|+++
T Consensus 235 f~~emy~~~d------------~~l~LrPt~e-~~~~~~~~~~~~s~~~LPlr~~~~g~~FR~--------E~~~~G~~~ 293 (455)
T 2dq0_A 235 FEDVIYKVED------------EDLYLIPTAE-HPLAGMHANEILDGKDLPLLYVGVSPCFRK--------EAGTAGKDT 293 (455)
T ss_dssp HHHTCCBBTT------------SSCEECSSTH-HHHHHTTTTEEEETTTCSEEEEEEEEEECC--------CTTCSSCSC
T ss_pred ChHhhCeecC------------CcEEEcCcCc-HHHHHHHHhCccCchhCCEEEEEecCcccC--------CCCcccccc
Confidence 9888887651 4689999997 999999999999999999999996666655 579999999
Q ss_pred ccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCCceEEeecCCCCCCcccccceeeeeeecCCCceeeee
Q psy10095 435 ENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNMKYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCM 514 (680)
Q Consensus 435 rGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~Eis 514 (680)
+||+|+|||+|||+|++| +|++|+++|++|+..+++||+.|||||||+.+|++|||++++++||||+|+|++++|+||+
T Consensus 294 ~GL~R~rqF~kvE~~~f~-~pe~s~~~~~e~l~~~~~il~~LGL~yrv~~~~~gdlg~~a~~~~diE~w~p~~~~~~ei~ 372 (455)
T 2dq0_A 294 KGIFRVHQFHKVEQFVYS-RPEESWEWHEKIIRNAEELFQELEIPYRVVNICTGDLGYVAAKKYDIEAWMPGQGKFREVV 372 (455)
T ss_dssp CSSSSCSEEEEEEEEEEE-CTTTHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCSSCSEEEEEEEEETTTTEEEEEE
T ss_pred CCceeeeeeEeeeEEEec-CHHHHHHHHHHHHHHHHHHHHHcCCceEEEECCCccccChhhceeeeeeecCcCCcccEEE
Confidence 999999999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcchhhh
Q psy10095 515 DLNAKVYIQ 523 (680)
Q Consensus 515 S~Sn~~~~q 523 (680)
|||||+++|
T Consensus 373 s~s~c~Dfq 381 (455)
T 2dq0_A 373 SASNCTDWQ 381 (455)
T ss_dssp EEEECTTTT
T ss_pred eeccchhhH
Confidence 999999888
No 6
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=100.00 E-value=2.1e-73 Score=623.01 Aligned_cols=341 Identities=14% Similarity=0.193 Sum_probs=316.0
Q ss_pred ccchHHhhcCHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHH
Q psy10095 153 SYDVKHVLENEDLIVNQLKQRRIDISEFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLER 232 (680)
Q Consensus 153 mLD~k~i~~n~e~v~~~l~~R~~~~dld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~ 232 (680)
|||+++||+|+|.|++++++|+.++++|+|+++|++||+++.++++|+++||++|++|++ ++ .++.+++++++
T Consensus 1 mld~~~~r~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~--~~-----~~~~~~l~~~~ 73 (421)
T 1ses_A 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLALDREVQELKKRLQEVQTERNQVAKRVPK--AP-----PEEKEALIARG 73 (421)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS--SC-----HHHHHHHHHHH
T ss_pred CCCHHHHHhCHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hc-----cccHHHHHHHH
Confidence 899999999999999999999999889999999999999999999999999999999986 11 13578899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC---CCeeEE-e-CC-C--CCCCChhhhhhcCCccccc----
Q psy10095 233 KQLKAEIKKFDSFMLDYQRNVIIKVLKLPNYLDNSTPEV---YETIYE-Y-DP-D--REGKNKIDMDALSKYVQYT---- 300 (680)
Q Consensus 233 k~Lk~elk~Le~~l~~le~~l~~~~l~LPN~~h~~VP~~---~n~vv~-~-~p-~--~~~~~H~elg~~l~l~D~~---- 300 (680)
++|+++|+++++++.++++++...++.|||+|||+||.+ +|++++ | .| . |++++|++||+++|||| +
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~~~~~vp~g~e~~n~~~~~~g~~~~~~~~~~~H~~lg~~l~l~d-~~~~~ 152 (421)
T 1ses_A 74 KALGEEAKRLEEALREKEARLEALLLQVPLPPWPGAPVGGEEANREIKRVGGPPEFSFPPLDHVALMEKNGWWE-PRISQ 152 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCTTSCSSSGGGCEEEEEESCCCCCSSCCCCHHHHHHHHTCBC-TTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccEEEEEeCCCCccCCCCCCHHHHHHHcCccc-ccccc
Confidence 999999999999999999999999999999999999965 357776 4 33 3 57899999999999999 6
Q ss_pred --CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCC
Q psy10095 301 --NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERR 378 (680)
Q Consensus 301 --~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~ 378 (680)
|++||+|.|.||+|++||++|+++.+. ++||++|.+|.|++.+++++||+.|+|.+++|.+.+ ++
T Consensus 153 ~~g~G~~~~~p~ga~l~~aL~~~~~~~~~-~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~d------------~~ 219 (421)
T 1ses_A 153 VSGSRSYALKGDLALYELALLRFAMDFMA-RRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE------------TD 219 (421)
T ss_dssp HHCSSCCCEETHHHHHHHHHHHHHHHHHH-HTTCEEEECCSEEEHHHHHHHTCTTTTGGGSCBBTT------------SS
T ss_pred ccCCCeEEECcHHHHHHHHHHHHHHHHHH-HcCCEEEeCCceecHHHHHhcCCCCcCchhcEEEcC------------Ce
Confidence 489999999999999999999999886 689999999999999999999999999888887641 46
Q ss_pred ceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCCh--h
Q psy10095 379 NHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNH--E 456 (680)
Q Consensus 379 l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~p--e 456 (680)
++|+||+| +|++++|+++++...+||+||+++|+|||. |+||+|++++||+|+|||+|||+|++| .| +
T Consensus 220 l~L~Pt~e-~~~~~~~~~~~~s~~~LPlr~~~~g~~FR~--------E~g~~Gr~~~GL~R~rqF~q~E~~~f~-~p~~e 289 (421)
T 1ses_A 220 LYLTGTAE-VVLNALHSGEILPYEALPLRYAGYAPAFRS--------EAGSFGKDVRGLMRVHQFHKVEQYVLT-EASLE 289 (421)
T ss_dssp EEECSSTH-HHHHHTTTTCEEEGGGCSEEEEEEEEEECC--------CCSCCCSCCCTTSSCSEEEEEEEEEEE-CSCHH
T ss_pred EEEeecCc-HHHHHHhcccccCchhCCEEEEecCCeecC--------CccccCcCCCCCeeeeeeeeeeEEEEe-CCCHH
Confidence 89999997 899999999999999999999996666555 579999999999999999999999999 88 9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecCcchhhhH
Q psy10095 457 NLCKEFQNIQSLLKSVMDKLNMKYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLNAKVYIQI 524 (680)
Q Consensus 457 ~S~~~~eeml~~~e~il~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn~~~~q~ 524 (680)
+|+++|++|+..+++||+.||||||||.+|++|||++++++||||||+|+++.|+||+|||||+++|.
T Consensus 290 ~s~~~~~e~~~~~~~il~~LGL~~rvv~l~t~dlg~~a~~~~DiE~w~p~~~~~~ei~s~s~~~Dfqa 357 (421)
T 1ses_A 290 ASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQA 357 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEECCHHHHCTTCSEEEEEEEEETTTTEEEEEEEEEEEETHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCceEEEEecCccCCchhhhcccHhheechhccchheeeccccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999998883
No 7
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=100.00 E-value=2.6e-71 Score=607.15 Aligned_cols=343 Identities=16% Similarity=0.161 Sum_probs=317.2
Q ss_pred ccchHHhhcCHHHHHHHHHhcCCC-CC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHH
Q psy10095 153 SYDVKHVLENEDLIVNQLKQRRID-IS-EFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYL 230 (680)
Q Consensus 153 mLD~k~i~~n~e~v~~~l~~R~~~-~d-ld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~ 230 (680)
|||+++||+|+|.|++++++|+.+ ++ +|+|+++|++||+++.++++|+++||++|++|+++++++. +.+++++
T Consensus 1 mld~~~~r~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~-----~~~~l~~ 75 (425)
T 2dq3_A 1 MIDINLIREKPDYVKERLATRDKELVSLVDKVLELDKRRREIIKRLEALRSERNKLSKEIGKLKREGK-----DTTEIQN 75 (425)
T ss_dssp CCCHHHHHHCHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSSCS-----CTTTSTT
T ss_pred CCCHHHHHhCHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc-----cHHHHHH
Confidence 899999999999999999999988 76 7999999999999999999999999999999998765442 3456888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC----CCeeEE-e-CC---CCCCCChhhhhhcCCccccc-
Q psy10095 231 ERKQLKAEIKKFDSFMLDYQRNVIIKVLKLPNYLDNSTPEV----YETIYE-Y-DP---DREGKNKIDMDALSKYVQYT- 300 (680)
Q Consensus 231 ~~k~Lk~elk~Le~~l~~le~~l~~~~l~LPN~~h~~VP~~----~n~vv~-~-~p---~~~~~~H~elg~~l~l~D~~- 300 (680)
++++|+++|+++++++.++++++...++.|||++||+||.+ +|++++ | .| +|++++|++||+++|||||.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~~~~~vp~g~~e~~n~~~~~~g~~~~~~f~~~~H~~l~~~l~l~d~~~ 155 (425)
T 2dq3_A 76 RVKELKEEIDRLEEELRKVEEELKNTLLWIPNLPHPSVPVGEDEKDNVEVRRWGEPRKFDFEPKPHWEIGERLGILDFKR 155 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCCTTSCCCSSGGGCEEEEEESCCCCCSSCCCCHHHHHHHTTCEEHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCccCcEEEEEeCCCCCCCCCcccHHHHHhhCCeEEecc
Confidence 99999999999999999999999999999999999999964 357776 4 33 25789999999999999995
Q ss_pred -----CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCcccccccc
Q psy10095 301 -----NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYE 375 (680)
Q Consensus 301 -----~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~ 375 (680)
|++||+|.|.||+|++||++|+.+.+. ++||++|.+|.|++.+++++||+.|.|.+++|.+.
T Consensus 156 ~~~~~g~G~~~~~p~ga~l~~~L~~~~~~~~~-~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~------------ 222 (425)
T 2dq3_A 156 GAKLSGSRFTVIAGWGARLERALINFMLDLHT-KKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKCE------------ 222 (425)
T ss_dssp HHHHHCSSCCEEETHHHHHHHHHHHHHHHHHH-HTTCEEEECCSEECHHHHHHHSCTTTTGGGSCBCT------------
T ss_pred cccccCCCceEECcHHHHHHHHHHHHHHHHHH-HcCCEEEECCccccHHHHHhcCCCCcChhhheEec------------
Confidence 689999999999999999999999886 68999999999999999999999999988888764
Q ss_pred CCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCCh
Q psy10095 376 ERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNH 455 (680)
Q Consensus 376 ~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~p 455 (680)
++++||+||++ +|++++|+++++...+||+||+++|+|||. |+|++|++++||+|+|||+|||+++|| .|
T Consensus 223 ~~~l~LrPt~e-~~i~~~~~~~i~s~~~LPlrl~~~g~~FR~--------E~~~~Gr~~~Gl~R~reF~q~E~~~f~-~p 292 (425)
T 2dq3_A 223 RDNLYLIPTAE-VPLTNLYREEILKEENLPIYLTAYTPCYRR--------EAGAYGKDIRGIIRQHQFDKVELVKIV-HP 292 (425)
T ss_dssp TTCCEECSSTH-HHHHGGGTTEEEETTTCCEEEEEEEEEECC--------CCSCCSSSCSSSSSCSEEEEEEEEEEE-CG
T ss_pred CCeEEEcCCCc-HHHHHHHHhhccccccCCeEEEEecCEecC--------CCCcccccccCcccccceEEeeEEEEC-CH
Confidence 24689999997 999999999999999999999997666655 579999999999999999999999999 89
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecCcchhhh
Q psy10095 456 ENLCKEFQNIQSLLKSVMDKLNMKYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLNAKVYIQ 523 (680)
Q Consensus 456 e~S~~~~eeml~~~e~il~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn~~~~q 523 (680)
++|++++++|+..++++|+.|||||||+.+|++|||++++++||||+|+|+++.|+||+|||||+++|
T Consensus 293 e~s~~~~~e~i~~~~~il~~LGL~~rvv~l~~gdlg~~a~~~~diE~w~p~~~~~~ei~s~sn~~Dfq 360 (425)
T 2dq3_A 293 DTSYDELEKLVKDAEEVLQLLGLPYRVVELCTGDLGFSAAKTYDIEVWFPSQNKYREISSCSNCEDFQ 360 (425)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHTCCEEEEECCTTTCCTTCSEEEEEEEEEGGGTEEEEEEEEEECTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCceEEEEecCCcCCChHHhccchhhccchhHHHHHHHHcCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999998888
No 8
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A
Probab=100.00 E-value=2.7e-66 Score=580.83 Aligned_cols=275 Identities=16% Similarity=0.202 Sum_probs=254.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC---CCeeEE-e--CCC--CCCCChhhhhhcCCccc
Q psy10095 227 KKYLERKQLKAEIKKFDSFMLDYQRNVIIKVLKLPNYLDNSTPEV---YETIYE-Y--DPD--REGKNKIDMDALSKYVQ 298 (680)
Q Consensus 227 ~l~~~~k~Lk~elk~Le~~l~~le~~l~~~~l~LPN~~h~~VP~~---~n~vv~-~--~p~--~~~~~H~elg~~l~l~D 298 (680)
.++++++.++++|+++++++.++++++...++.|||++||+||.+ +|++++ | .|. |++++|++||+++||||
T Consensus 177 ~l~~eV~pLk~eLk~lE~eL~e~e~eL~~lll~ipN~~~~~vp~g~e~~n~~~~~~g~~~~~~~~~~dH~~lg~~l~l~d 256 (536)
T 3err_A 177 DMLKRVEPLRNELQKLEDDAKDNQQKLEALLLQVPLPPWPGAPVGGEEANREIKRVGGPPEFSFPPLDHVALMEKNGWWE 256 (536)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCTTSCCSSGGGCEEEEEESCCCCCSSCCCCHHHHHHHHTCBC
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCCCCHHHHHHHcCCcc
Confidence 456778899999999999999999999999999999999999964 467776 4 333 57899999999999999
Q ss_pred cc------CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccc
Q psy10095 299 YT------NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEI 372 (680)
Q Consensus 299 ~~------~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~ 372 (680)
+ |+|||||+|.||+|++||++|++|.+. ++||++|++|+||+.+++++||++|+|.+++|.+.+
T Consensus 257 -~~~~k~~G~g~~~~~p~Ga~l~~aL~~~~~~~~~-~~Gy~ev~~P~lv~~~l~~~sG~~~~f~e~mf~~~~-------- 326 (536)
T 3err_A 257 -PRISQVSGSRSYALKGDLALYELALLRFAMDFMA-RRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE-------- 326 (536)
T ss_dssp -TTHHHHHCSSCCCEEHHHHHHHHHHHHHHHHHHH-HTTCEEEECCSEEEHHHHHHHTCTTTTGGGCCEETT--------
T ss_pred -cccccCCCCceeEEcCHHHHHHHHHHHHHHHHHH-HcCCEEEeccccccHHHHHhcCCcccChhhceEecC--------
Confidence 5 689999999999999999999999886 579999999999999999999999999999998762
Q ss_pred cccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEec
Q psy10095 373 GYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGT 452 (680)
Q Consensus 373 ~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~ 452 (680)
+++||+||+| +|++++|+++++...+||++|+++|+|||. |+||+|++++||+|||||+|||+|+||
T Consensus 327 ----~~~~L~PT~E-~~~~~l~~~~i~s~~~LPlr~~~~~~~fR~--------E~gs~Gr~~~GL~RvrqF~k~e~~~f~ 393 (536)
T 3err_A 327 ----TDLYLTGTAE-VVLNALHSGEILPYEALPLRYAGYAPAFRS--------EAGSFGKDVRGLMRVHQFHKVEQYVLT 393 (536)
T ss_dssp ----TTEEECSSTH-HHHHHHTTTCEEEGGGCSEEEEEEEEEECC--------CTTCTTSSCSTTSSCSEEEEEEEEEEE
T ss_pred ----CCEEEccCCc-HHHHHHHhcccccHhhCCeeEEEecccccC--------CccccCCCCCCceeeeeeEEEEEEEEE
Confidence 4689999997 899999999999999999999996666655 579999999999999999999999999
Q ss_pred CChh--HHHHHHHHHHHHHHHHHHHcCCceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecCcchhhhHH
Q psy10095 453 NNHE--NLCKEFQNIQSLLKSVMDKLNMKYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLNAKVYIQIV 525 (680)
Q Consensus 453 ~~pe--~S~~~~eeml~~~e~il~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn~~~~q~~ 525 (680)
.|+ +|+++|++|++.+++||+.||||||||.+||||||++|+++||||+|||+++.|+||||||||+++|..
T Consensus 394 -~pe~e~s~~~~e~~~~~~~~i~~~LgLpyrvv~~~tgdlg~~a~~~yDiE~w~p~~~~~~Ei~s~sn~~dyqar 467 (536)
T 3err_A 394 -EASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQAR 467 (536)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCTTTSCTTCSEEEEEEEEEGGGTEEEEEEEEEEEETHHHH
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHHcCCcEEEEEcCCcccCCChhheeeeeEecCCCCCeEEEEEecCccChhhc
Confidence 888 999999999999999999999999999999999999999999999999999999999999999989843
No 9
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A*
Probab=100.00 E-value=1.3e-45 Score=391.32 Aligned_cols=205 Identities=7% Similarity=-0.030 Sum_probs=176.4
Q ss_pred cccccC-cceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCc------
Q psy10095 296 YVQYTN-RLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNEND------ 368 (680)
Q Consensus 296 l~D~~~-srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~------ 368 (680)
||+-.| ++||+++|.+|+|.+||.+|+++ +. ++||++|.+|.||+.+++++||++|+|++++|.+.....+
T Consensus 47 l~~~~g~~g~y~~~g~~a~L~~aLe~~~~~-~~-~~Gy~ev~~P~lv~~~~~e~SGhl~~F~e~mf~v~~~~~d~~e~~~ 124 (346)
T 3mf2_A 47 LFHSMGSDGVYARTALYESIVERLAALITS-HR-EAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLHGTEREINA 124 (346)
T ss_dssp HEEEEEETTEEEEEHHHHHHHHHHHHHHHH-TC-CTTCEEEECCSEEEHHHHHHTTHHHHCGGGCEEEEEECSCHHHHHH
T ss_pred hhcccCCCceEEecchHHHHHHHHHHHHHh-hH-hcCCeEEECCCccCHHHHHhcCCcccChhhcceeecccccchhhhh
Confidence 455555 89999999999999999999998 65 5799999999999999999999999999999987431100
Q ss_pred ----------cccccccCCCceeeccchhhhhhhhhccc-ccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccc
Q psy10095 369 ----------LSEIGYEERRNHLVGSAHMSMFCAYHTNH-SVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENL 437 (680)
Q Consensus 369 ----------~~~~~~~~~~l~LigTaeevpl~~~~~~e-~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL 437 (680)
+.. .-.+.++||+||++ +|++++|+++ ++. +.|++|+++|+|||. |+ | .||
T Consensus 125 ll~~~~~~~~~~~-~l~~~d~~LiPtac-vpl~~~~~~eg~i~--~~plr~~~~g~CFR~--------Ea-S-----~GL 186 (346)
T 3mf2_A 125 AVSRFDAGGDWTT-SLSPADLVLSPAAC-YPVYPIAASRGPLP--KGGLRFDVAADCFRR--------EP-S-----KHL 186 (346)
T ss_dssp HHHHHHTTSCGGG-GEEEEEEEECSSSS-TTHHHHHHTTCSCC--TTCEEEEEEEEEECC--------CC-C-----SST
T ss_pred hhhhhcccccccc-ccCCCCEEEccccc-HHHHHHHccCCccc--ccCeEEEEECCccCC--------cC-C-----CCC
Confidence 000 00134799999997 9999999987 666 339999995555555 56 4 499
Q ss_pred hhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCCceEEeecCCCCCCcc------------cccceeeeeeec
Q psy10095 438 YNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNMKYRICKAPADVLHTS------------ESHRLEYQVYSY 505 (680)
Q Consensus 438 ~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~LpyRVv~m~tgdLg~~------------a~kkyDIEvW~P 505 (680)
+|||||+|||+|.|| +||+|++++++|++++++||+.|||||||+.+ +|+||+ +++|||||||+|
T Consensus 187 ~RvhqF~kvE~v~~~-tpEqs~~e~e~l~~~ae~il~~LgLpyrv~~~--~D~~f~~~G~l~~~~Q~~~~~kyDlevw~p 263 (346)
T 3mf2_A 187 DRLQSFRMREYVCIG-TPDDVSDFRERWMVRAQAIARDLGLTFRVDYA--SDPFFGRVGQMKAVSQKQQQLKFELLIPLR 263 (346)
T ss_dssp TSCSEEEEEEEEEEE-SHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEC--CCCCCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred eeeeeeEEEEEEEEe-CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEc--cCCCcCcccchhhhccccccceEEEEEEcC
Confidence 999999999999999 99999999999999999999999999999977 799998 368999999999
Q ss_pred CCCceeeeeecCcchhhh
Q psy10095 506 SLNSWVTCMDLNAKVYIQ 523 (680)
Q Consensus 506 ~~~~Y~EisS~Sn~~~~q 523 (680)
++++|+||||||||.++|
T Consensus 264 ~~~~y~EisS~Sn~~dfq 281 (346)
T 3mf2_A 264 SEEQPTACMSFNYHREHF 281 (346)
T ss_dssp CSSSCEEEEEEEECTTHH
T ss_pred CCCCeeEEEeeecccchh
Confidence 999999999999999999
No 10
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A*
Probab=100.00 E-value=4.2e-36 Score=334.92 Aligned_cols=246 Identities=7% Similarity=-0.011 Sum_probs=196.6
Q ss_pred HHHcCCCCCCCCCCCCCCeeEEe-CC--CCCCCChhhhhhcCCcccc--cCcceEEEeCchHHHHHHHHHHHHHHHHhhC
Q psy10095 256 KVLKLPNYLDNSTPEVYETIYEY-DP--DREGKNKIDMDALSKYVQY--TNRLDIHYLGNAAKFEYLIPIILKDYFTVKH 330 (680)
Q Consensus 256 ~~l~LPN~~h~~VP~~~n~vv~~-~p--~~~~~~H~elg~~l~l~D~--~~srfyyL~G~gA~LE~ALi~y~ld~~~~~~ 330 (680)
--+.|||++||+||.+.+....+ .+ +|+ ++|++|+.++|++|+ ..+++|++.+.|++|.++|.+|+.+.+ .+
T Consensus 11 ~~~~~pn~~~~~vp~g~~~~~~~~~~~~~f~-~~~~~l~~~~glid~~~~~~G~~~~~P~g~~l~~~i~~~~~~~~-~~- 87 (501)
T 1nj1_A 11 SSGLVPRGSHMQKPIKKDPNRYHGEKMTEFS-EWFHNILEEAEIIDQRYPVKGMHVWMPHGFMIRKNTLKILRRIL-DR- 87 (501)
T ss_dssp ----------------------------CHH-HHHHHHHHHTTCEECCCSSTTCCEECHHHHHHHHHHHHHHHHHH-TT-
T ss_pred ccCCCCCCCCCcCCCCCCCCccccCCCCCcc-HhHHHHHHHCCCccccCCCCceEEECccHHHHHHHHHHHHHHHH-Hc-
Confidence 44689999999999764332223 22 233 889999999999999 458999999999999999999999876 67
Q ss_pred CcEeeccCcccchHHHHh-hcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEe
Q psy10095 331 NFMPFTNTDLCKGVIVEG-YGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYV 409 (680)
Q Consensus 331 Gf~~i~~P~~Vr~~v~~g-~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~ 409 (680)
||++|.+|.|++.+++.+ +|+.+.|.+++|.+...+.+ ..+++++|.||++ +|++.+|.+.+....+||+|++
T Consensus 88 G~~ei~tP~l~~~~l~~~~sG~~~~f~~emy~~~d~g~~-----~~~~~l~LrPt~e-~~i~~~~~~~~~s~~~LPlr~~ 161 (501)
T 1nj1_A 88 DHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLS-----KLQRKLALRPTSE-TVMYPMFALWVRSHTDLPMRFY 161 (501)
T ss_dssp TCEECCCCSEEEHHHHTTSHHHHHHTTTTCCEEEEETTE-----EEEEEEEECSSSH-HHHHHHHHHHCCBTTTCCEEEE
T ss_pred CCEEEecCcEecHHHHhcccCCcccCCcceEEEecCCCc-----ccCCeeEEccCCC-HHHHHHHHhhhcccccCCEEEE
Confidence 999999999999999998 99888898999988642110 0134699999987 8999999999998899999999
Q ss_pred eeCcccCCCccccccccccCCCCCcccchhhhccc-eEEEE-EecCChhHHHHHHHHHHHHHHHHHHHcCCceEEeecCC
Q psy10095 410 TSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQRE-KVNLF-VGTNNHENLCKEFQNIQSLLKSVMDKLNMKYRICKAPA 487 (680)
Q Consensus 410 a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~-KVE~f-~~~~~pe~S~~~~eeml~~~e~il~~L~LpyRVv~m~t 487 (680)
.+|+|||.| + ++++||+|+|||+ ++|+. .+| +++++++++++|++.+.+||+.||||||+...|+
T Consensus 162 q~g~~fR~E--------~----~~~rGl~R~REF~~q~e~~~~~~-~~e~a~~e~~~~l~~~~~i~~~Lgl~~~~~~~~~ 228 (501)
T 1nj1_A 162 QVVNTFRYE--------T----KHTRPLIRVREITTFKEAHTIHA-TASEAEEQVERAVEIYKEFFNSLGIPYLITRRPP 228 (501)
T ss_dssp EEEEEECCC--------C----SCCBTTTBCSEEEEEEEEEEEES-SHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCT
T ss_pred eecCEeeCC--------C----CCCCCCceeEEEeeeeeEEEEEC-CHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 988888887 2 2599999999999 99975 577 8999999999999999999999999999999999
Q ss_pred CCCCcccccceeeeeeecCCCceeeeeecCcchhhhH
Q psy10095 488 DVLHTSESHRLEYQVYSYSLNSWVTCMDLNAKVYIQI 524 (680)
Q Consensus 488 gdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn~~~~q~ 524 (680)
+|+++++.++||||+|||. ++|.||+|++|+...|.
T Consensus 229 ~e~~~~a~~~~die~~l~~-g~~~ei~t~~~lg~~~a 264 (501)
T 1nj1_A 229 WDKFPGSEYTVAFDTLMPD-GKTLQIGTVHNLGQTFA 264 (501)
T ss_dssp TTSCTTCSEEEEEEEECTT-SCEEEEEEEEEEETHHH
T ss_pred hhhcCCcccceEEEEEcCC-CCEEEEEEEEeccccch
Confidence 9999999999999999997 89999999999976653
No 11
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A
Probab=100.00 E-value=1.5e-33 Score=314.77 Aligned_cols=221 Identities=10% Similarity=0.074 Sum_probs=186.9
Q ss_pred CChhhhhhcCCcccc-cCcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEee
Q psy10095 285 KNKIDMDALSKYVQY-TNRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLV 363 (680)
Q Consensus 285 ~~H~elg~~l~l~D~-~~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~ 363 (680)
..-.++..+.|+|+. .++++|++.+.|++|.++|.+|+.+.++.+.||++|.+|.|++.+++++||+.+.|.+++|.+.
T Consensus 203 ~~~~~ll~raG~i~~~~~~G~y~~~P~G~~L~~~L~~~~~~e~~~~~G~~EV~tP~L~~~el~~~SGh~~~F~demy~v~ 282 (522)
T 2cja_A 203 EDPTQAMMKEGWLKRGSSRGQWIHGPQSARIFRTFEKIVLEELLEPLGYREMIFPKLVTWEVWMKSGHAKGVYPEIYYVC 282 (522)
T ss_dssp SCHHHHHHHTTSEEECSSTTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECBCCSEEEHHHHHHHTGGGTCGGGCCEEE
T ss_pred hHHHHHHHHCCCeeeeCCCCeEEECchHHHHHHHHHHHHHHHHHHHcCCEEEECCCcccHHHHhhcCCcCccccceeeee
Confidence 445688889999976 6789999999999999999999998644567999999999999999999999999999999885
Q ss_pred cCC--C--------------------ccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEee-eCcccCCCcc
Q psy10095 364 NNE--N--------------------DLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVT-SGKQYGFHNL 420 (680)
Q Consensus 364 ~~~--~--------------------~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a-~s~cyr~Ea~ 420 (680)
..+ + ++..+ -++.+++|.||++ +|++.+|+++++...+||++++. +|+|||.|
T Consensus 283 ~~~~Rd~~~~e~~~~~~~~~~~~~~~~~~~~-~~~~~l~LrPt~e-~~i~~~f~~~i~s~~~LPlrl~q~ig~~FR~E-- 358 (522)
T 2cja_A 283 PPQTRDPDYWEEVADYYKVTHEVPTKLIKEK-IAEPIGGMCYAQC-PPFWMYVAGETLPNEEIPVKVFDRSGTSHRYE-- 358 (522)
T ss_dssp CBSCCCHHHHHHHHHHHHHHSSCCHHHHHHH-BCCCCEEECSSSS-GGGGGGTTTCEECGGGCSEEEEECSSEEECCC--
T ss_pred cCCccchhhhhhhhhhhhccccccccccccc-cCCCcEEEccCCc-HHHHHHHHhcccccccCCeeEEEEcCceEeCC--
Confidence 211 0 00000 0135799999997 89999999999999999999999 88877775
Q ss_pred ccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHH-HHHHHHHHHcCCceEEeecCCCCCCc-------
Q psy10095 421 LCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQ-SLLKSVMDKLNMKYRICKAPADVLHT------- 492 (680)
Q Consensus 421 ~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml-~~~e~il~~L~LpyRVv~m~tgdLg~------- 492 (680)
+|+ ++||+|+|||+++|++.|| +|++|++++++|+ ..++.+++.|||| +| .+ ++|.++
T Consensus 359 ------pgs----~~GL~R~REF~q~E~~~F~-~pe~s~ee~ee~i~~~~~~~l~~LGLp-~v-~~-~~D~f~~a~~G~~ 424 (522)
T 2cja_A 359 ------SGG----IHGIERVDEFHRIEIVWIG-TKEEVLKCAEELHDRYMHIFNDILDIE-WR-KA-RVTPWFMAQEGLL 424 (522)
T ss_dssp ------SSS----CCCTTSCSEEEEEEEEEEE-EHHHHHHHHHHHHHHHHHHHHHTSCCC-EE-EE-EC-----------
T ss_pred ------CCC----CCCCeEeEEEEEeeEEEEe-ChHHHHHHHHHHHHHHHHHHHHHcCCC-EE-ee-ccCCccccccccc
Confidence 354 8999999999999999999 9999999999999 9999999999999 65 33 567655
Q ss_pred -----ccccceeeeeeec---CCCceeeeeecCcchhhh
Q psy10095 493 -----SESHRLEYQVYSY---SLNSWVTCMDLNAKVYIQ 523 (680)
Q Consensus 493 -----~a~kkyDIEvW~P---~~~~Y~EisS~Sn~~~~q 523 (680)
++++||||||||| |++.|+||+|||||.++|
T Consensus 425 G~~q~~a~~k~DiE~~~P~~~g~~~~~eisS~s~~~d~q 463 (522)
T 2cja_A 425 GLAEENTVGTTDYEACLPYRGPDGEWLEFQNVSINGDKY 463 (522)
T ss_dssp -----CCCEEEEEEECCGGGCTTCCCEEEEEEEECTTHH
T ss_pred cchhccccceEEEEEecccccCCCcEEEEeeechhhhhc
Confidence 4799999999999 799999999999999777
No 12
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=99.97 E-value=1.5e-33 Score=260.30 Aligned_cols=113 Identities=42% Similarity=0.672 Sum_probs=64.6
Q ss_pred cchhhhhccccCCchhhhhhcccchhHhhh---ccCCCCCCCCCceeecccccccccChHHHHHhhccchhhhhhhhccc
Q psy10095 14 NKRSIKTKLYKRDLDQIDGDCKEENAEKLL---HQEIDFDKPGEAQFYCLHCARHFIDEHALKEHFRTKVHKRRLKALEV 90 (680)
Q Consensus 14 ~~~~~ktk~r~kd~Dqi~~dl~~~~~~~~~---~~~~d~dlpG~gq~yC~~C~r~F~~~~~l~~H~k~K~HKrr~K~l~~ 90 (680)
.+-.-|||||+||+|||++||+++...++. ++++|+|+||.|+|||++|+|+|.+..+|..|++||.||||||.|++
T Consensus 5 ~~~~~~tkrr~rDlDqI~~dl~~e~~~k~~~~~~~~~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK~HKrrvk~l~~ 84 (124)
T 1zr9_A 5 HHHLEKAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQLSV 84 (124)
T ss_dssp -------------------------------CCSCSSCSSSGGGGCSEETTTTEECSSHHHHHHHTTCHHHHHHHHHHTS
T ss_pred hhhHHhhcccCCCHHHHHHHHHhHHHHHhhccccccccccCCCCcceEcccCcchhCCHHHHHHHHhhhhhhHHHHHhcc
Confidence 445578999999999999999998888888 89999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCCCCcccccccccccccccc
Q psy10095 91 EPYTVEESERAAGYGSYQTPKIRKLQTQSLDKTAEI 126 (680)
Q Consensus 91 ~pyt~~eae~aag~g~~~~~~~~~~~~~~~~~~~~~ 126 (680)
+||||+|||+|||||+|++|++++|++|+++++++|
T Consensus 85 ~p~Tq~eAe~aag~g~~~~~~~~~~~~~~~~~~~~~ 120 (124)
T 1zr9_A 85 EPYSQEEAERAAGMGSYVPPRRLAVPTEVSTEVPEM 120 (124)
T ss_dssp CSSCTTTSSCSCCCCCCC------------------
T ss_pred CCCcHHHHHHhccCCCCCCCcccccccccccccccc
Confidence 999999999999999999999999999999999888
No 13
>4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens}
Probab=99.97 E-value=2e-30 Score=289.96 Aligned_cols=220 Identities=7% Similarity=-0.081 Sum_probs=193.9
Q ss_pred CChh--hhhhcCCcccc-cCcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHh-hcCCCCCCCCce
Q psy10095 285 KNKI--DMDALSKYVQY-TNRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEG-YGDHYLSPHDNM 360 (680)
Q Consensus 285 ~~H~--elg~~l~l~D~-~~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g-~G~~p~~~~~~~ 360 (680)
.++| +|+.++||+|+ ..+++|++.+.|+.|.++|++|+.+.+. +.||++|.+|.|++.+++++ +|+.+.|.+++|
T Consensus 31 f~~wy~~l~~~~~lid~~~~~G~~~~lP~G~~i~~~L~~~~~~~~~-~~Gy~ev~tP~l~~~~l~~k~sGh~~~f~~emy 109 (519)
T 4hvc_A 31 LADWYSQVITKSEMIEYHDISGCYILRPWAYAIWEAIKDFFDAEIK-KLGVENCYFPMFVSQSALEKEKTHVADFAPEVA 109 (519)
T ss_dssp HHHHHHHHHHHTTCEEECSSTTCEEECHHHHHHHHHHHHHHHHHHH-HTTCEECBCCSEEEHHHHTTSCCSCGGGGGGCE
T ss_pred chHHHHHHHHHCCCeEecCCCCeEEECccHHHHHHHHHHHHHHHHH-HcCCEEEeccccccHHHHhcccCCcccccccce
Confidence 4566 99999999999 5689999999999999999999998775 57999999999999999997 899999988888
Q ss_pred EeecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhh
Q psy10095 361 VLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNS 440 (680)
Q Consensus 361 ~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~Rv 440 (680)
.+...++. .-++.++|.||++ ++++.+|.+.+....+||+||+.+|+|||.|+ . .++||+|+
T Consensus 110 ~~~d~g~~-----~l~e~l~LrPtse-~~i~~~~~~~i~SyrdLPlrl~q~g~~fR~E~--------~----~~~Gl~R~ 171 (519)
T 4hvc_A 110 WVTRSGKT-----ELAEPIAIRPTSE-TVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEF--------K----HPQPFLRT 171 (519)
T ss_dssp EEEEETTE-----EEEEEEEECSSSH-HHHHHHHHHHCSSGGGCCEEEEEEEEEECCCC--------S----CCBTTTBC
T ss_pred EEeccCCc-----ccccceeeCCCCc-HHHHHHHHhhccccccCCeEEEEEcCeeeCCC--------C----CCCCCcce
Confidence 87631110 0013589999997 89999999998888999999999888888863 2 35999999
Q ss_pred hccceEEEEE-ecCChhHHHHHHHHHHHHHHHHHHHc-CCceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecCc
Q psy10095 441 IQREKVNLFV-GTNNHENLCKEFQNIQSLLKSVMDKL-NMKYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLNA 518 (680)
Q Consensus 441 HQF~KVE~f~-~~~~pe~S~~~~eeml~~~e~il~~L-~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn 518 (680)
|||+++|+++ +| ++++|++++++|++.+++||+.| +|||+++..+.+|..+.+..+||||||||+.+++.|++++++
T Consensus 172 ReF~q~e~h~~~~-~~e~a~~E~~~~l~~~~~i~~~ll~lp~~~~~~t~~e~~~Ga~~t~~iEa~~p~~gr~~q~gT~~~ 250 (519)
T 4hvc_A 172 REFLWQEGHSAFA-TMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGDYTTTIEAFISASGRAIQGGTSHH 250 (519)
T ss_dssp SEEEEEEEEEEES-SHHHHHHHHHHHHHHHHHHHHTTSCCCCEEEECCTTTSCTTSSEEEEEEEEETTTTEEEEEEEEEE
T ss_pred eEEEEeeEEEEec-CHHHHHHHHHHHHHHHHHHHHHhcCCcceeeecCCccccCCchhheeeeeeeccCCCEEeeccccc
Confidence 9999999998 88 99999999999999999999997 999999998889999999999999999999999999999988
Q ss_pred chhhhH
Q psy10095 519 KVYIQI 524 (680)
Q Consensus 519 ~~~~q~ 524 (680)
+...+.
T Consensus 251 Lg~~~s 256 (519)
T 4hvc_A 251 LGQNFS 256 (519)
T ss_dssp EETHHH
T ss_pred ccchhh
Confidence 875553
No 14
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803}
Probab=99.96 E-value=1.4e-29 Score=282.86 Aligned_cols=214 Identities=8% Similarity=0.005 Sum_probs=190.3
Q ss_pred hhhhcCCcccc--cCcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHH-hhcCCCCCCCCceEeecC
Q psy10095 289 DMDALSKYVQY--TNRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVE-GYGDHYLSPHDNMVLVNN 365 (680)
Q Consensus 289 elg~~l~l~D~--~~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~-g~G~~p~~~~~~~~i~~~ 365 (680)
+|+.+.||+|+ .++++|++.+.|+++.++|.+|+.+.+. +.||++|.+|.|++.++++ ++|+.+.+.+++|.+...
T Consensus 30 ~l~~~aglid~r~~~~G~~~~lP~G~~i~~~L~~~~~~~~~-~~Gy~eV~tP~l~~~el~~k~sgh~~~f~~emy~v~d~ 108 (518)
T 3ial_A 30 AIMDAAELVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYA-KVGISQILFPTVIPESFLKKESDHIKGFEAECFWVEKG 108 (518)
T ss_dssp HHHHHTTCEETTSSSTTCCEECHHHHHHHHHHHHHHHHHHH-HTTCEECBCCSEEEHHHHTSSHHHHHHHGGGCEEEEEE
T ss_pred HHHHHCCCcccCCCCCCeEEECccHHHHHHHHHHHHHHHHH-HcCCEEEEcccccCHHHHHhhcCCcccccccEEEEecC
Confidence 99999999997 4689999999999999999999998764 6899999999999999996 689888888888887632
Q ss_pred CCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccce
Q psy10095 366 ENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREK 445 (680)
Q Consensus 366 ~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~K 445 (680)
+.. ..+.+++|.||++ ++++.+|++.+....+||+|++.+|+|||.| +++ ++||+|+|||++
T Consensus 109 g~~-----~~~~~l~LrPt~e-~~i~~~~~~~i~SyrdLPlrl~q~~~~fR~E--------~~~----~~GL~R~REF~q 170 (518)
T 3ial_A 109 GLQ-----PLEERLALRPTSE-TAIYSMFSKWVRSYKDLPLKIHQTCTIFRHE--------TKN----TKPLIRVREIHW 170 (518)
T ss_dssp TTE-----EEEEEEEECSSSH-HHHHHHHHHHCCBGGGCCEEEEEEEEEECTT--------CCS----CBTTTBCSEEEE
T ss_pred CCc-----ccCcceeECCCCc-HHHHHHHHhhhcccccCCeEEEEEeceecCC--------CCC----CCCCceeeEEEE
Confidence 110 0134699999987 8999999999988899999999988888776 343 699999999999
Q ss_pred EEEEEe-cCChhHHHHHHHHHHHHHHHHH-HHcCCceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecCcchhhh
Q psy10095 446 VNLFVG-TNNHENLCKEFQNIQSLLKSVM-DKLNMKYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLNAKVYIQ 523 (680)
Q Consensus 446 VE~f~~-~~~pe~S~~~~eeml~~~e~il-~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn~~~~q 523 (680)
+|++.| | +++++++++++|++.+.+|| +.|||||+++.+|++|++++|..+||||+|||+ +++.|+++++++.+.+
T Consensus 171 ~e~h~f~~-~~e~a~~e~~~~l~~~~~i~~~~LGlp~~~~~~~~~e~~~gA~yt~~iE~~~pd-gr~ie~gt~~~Lg~~~ 248 (518)
T 3ial_A 171 NEAHCCHA-TAEDAVSQLSDYWKVIDTIFSDELCFKGQKLRRVCWDRFPGADYSEVSDVVMPC-GRVLQTAGIHNLGQRF 248 (518)
T ss_dssp EEEEEEES-SHHHHHHHHHHHHHHHHHHHTTTTCCCCEEEEECGGGCCTTCSEEEEEEEECTT-SCEEEEEEEEEEETHH
T ss_pred eeEEEEEC-CHHHHHHHHHHHHHHHHHHHHHhcCCcEEeeecChhhccCCCccceEEEEEcCC-CCEEEEeceecccchh
Confidence 999999 6 99999999999999999999 999999999999999999999999999999997 8999999988877643
No 15
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A*
Probab=99.93 E-value=4.6e-26 Score=251.72 Aligned_cols=181 Identities=12% Similarity=0.061 Sum_probs=159.8
Q ss_pred CCCCCCCChhhhhhcCCccccc--CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCC
Q psy10095 279 DPDREGKNKIDMDALSKYVQYT--NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSP 356 (680)
Q Consensus 279 ~p~~~~~~H~elg~~l~l~D~~--~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~ 356 (680)
.+.|+++||++||++|+||+|. ++++|++.+.|+.|.++|.+|+.+.++.+.||++|.+|.|++.++++++|+.+.+.
T Consensus 29 ~~~~~~rdH~~lg~~l~l~~~~~~~~G~~~~lP~g~~l~~~l~~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~ 108 (460)
T 3uh0_A 29 SSATPATMTSMVSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYA 108 (460)
T ss_dssp -CCCHHHHHHHHHHHHTCEECCTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTSCCEECCCCSEEEHHHHHHHTCTTTSG
T ss_pred CCCCCCCCHHHHHHhCCCceeccCCCCcEEECccHHHHHHHHHHHHHHHHHHhcCCEEEECCeeccHHHHHhcCCccccc
Confidence 3456789999999999999997 58999999999999999999999877356899999999999999999999999998
Q ss_pred CCceEeecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCccc
Q psy10095 357 HDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVEN 436 (680)
Q Consensus 357 ~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrG 436 (680)
+++|.+...+ ..+..++|.||++ ++++.+|.+.+....+||+||+.+|+|||.| ++++ ++|
T Consensus 109 ~emy~~~d~~-------~~~~~l~LrPt~~-~~~~~~~~~~~~s~r~LPlrl~~~g~~fR~E--------~~~~---~~G 169 (460)
T 3uh0_A 109 DDMFKVETTD-------EEKEEYGLKPMNC-PGHCLIFGKKDRSYNELPLRFSDFSPLHRNE--------ASGA---LSG 169 (460)
T ss_dssp GGSCEECC-------------CEEECSCSH-HHHHHHHTTSCCBGGGCSEEEEECCEEECCC--------CTTT---CBT
T ss_pred cceEEEecCC-------CCCceEEEcccCc-HHHHHHHHhccccccccCeEEEEecCeeeCC--------CCCC---CCC
Confidence 8888876311 0235799999997 8999999999999999999999988877776 3443 899
Q ss_pred chhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHH-HHcCCc
Q psy10095 437 LYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVM-DKLNMK 479 (680)
Q Consensus 437 L~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il-~~L~Lp 479 (680)
|+|+|||+++|+++|| +|++++++++++++.+.++| +.||||
T Consensus 170 L~R~ReF~q~d~~~f~-~~e~~~~e~~~~i~~~~~~~~~~lGl~ 212 (460)
T 3uh0_A 170 LTRLRKFHQDDGHIFC-TPSQVKSEIFNSLKLIDIVYNKIFPFV 212 (460)
T ss_dssp TTBCSEEEEEEEEEEE-CGGGHHHHHHHHHHHHHHHHTTTSCCC
T ss_pred ceeeeeEEEeeEEEEc-CHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999 89999999999999999999 999998
No 16
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A*
Probab=99.90 E-value=9.9e-25 Score=236.04 Aligned_cols=204 Identities=8% Similarity=0.069 Sum_probs=176.1
Q ss_pred CChhhhhhcCCccccc--CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEe
Q psy10095 285 KNKIDMDALSKYVQYT--NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVL 362 (680)
Q Consensus 285 ~~H~elg~~l~l~D~~--~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i 362 (680)
+||++||+++|||+|. ++++|.+.+.|+++.++|.+++.+.+ .+.||.+|.+|.|.+.+++.++|..+.+.+++|.+
T Consensus 1 ~dh~~l~~~~~l~~~~~~~~G~~d~lP~g~~~~~~i~~~~~~~~-~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~em~~~ 79 (401)
T 1evl_A 1 RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKL-KEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTT 79 (401)
T ss_dssp CCHHHHHHHTTCEECCTTSTTCCEECHHHHHHHHHHHHHHHHHH-HHTTCEECBCCSEEEHHHHHHHTHHHHSGGGCCEE
T ss_pred CChHHHHHhCCceEecCCCCcceEECchHHHHHHHHHHHHHHHH-HHcCCEEEECCeeccHHHHHhcCcHhhhchhhEeE
Confidence 5899999999999887 47899999999999999999999877 56899999999999999999999887777788883
Q ss_pred ecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhc
Q psy10095 363 VNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQ 442 (680)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQ 442 (680)
+. ++.+++|.||++ +|++.+|.+.+....+||+|++.+|+|||.|. ++ ..+||+|+||
T Consensus 80 d~----------~~~~~~LrP~~~-~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~--------~~---p~~Gl~R~re 137 (401)
T 1evl_A 80 SS----------ENREYCIKPMNC-PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEP--------SG---SLHGLMRVRG 137 (401)
T ss_dssp EE----------TTEEEEECSCSH-HHHHHHHTSSCCBGGGCSEEEEEEEEEECCCC--------GG---GCBTTTBCSE
T ss_pred ec----------CCceEEEcCCCC-HHHHHHHHhhhhhhhhCChhhccccceecCCC--------Cc---ccccccccCc
Confidence 31 235689999987 89999999988877799999999998888872 21 5889999999
Q ss_pred cceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCC-ceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecC
Q psy10095 443 REKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNM-KYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLN 517 (680)
Q Consensus 443 F~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~L-pyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~S 517 (680)
|+++|+.+|| +++++++++++|+..+.++|+.||| +|+| .+++++ +.+..|.|+|+++.+.+.++.+++
T Consensus 138 F~q~d~~~f~-~~~~~~~e~~e~i~~~~~~~~~lgl~~~~~-~~~~~~----~~~~~~~~~~~~a~~~~~~~l~~~ 207 (401)
T 1evl_A 138 FTQDDAHIFC-TEEQIRDEVNGCIRLVYDMYSTFGFEKIVV-KLSTRP----EKRIGSDEMWDRAEADLAVALEEN 207 (401)
T ss_dssp EEEEEEEEEE-CGGGHHHHHHHHHHHHHHHHHTTTCSCCEE-EEECCC----SSCCSCHHHHHHHHHHHHHHHHHT
T ss_pred EEecceEEeC-CHHHHHHHHHHHHHHHHHHHHHcCCCceEE-EEecCC----cccCCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999 8999999999999999999999999 8998 667766 567788899987766655554443
No 17
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1
Probab=99.90 E-value=8.8e-25 Score=250.32 Aligned_cols=206 Identities=8% Similarity=0.067 Sum_probs=183.4
Q ss_pred CCCChhhhhhcCCccccc--CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCce
Q psy10095 283 EGKNKIDMDALSKYVQYT--NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNM 360 (680)
Q Consensus 283 ~~~~H~elg~~l~l~D~~--~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~ 360 (680)
..++|..||+++++++|. ++++|++.+.|+++.++|.+|+.+.+ .+.||.+|.+|.|++.++++++|..+.+.+++|
T Consensus 240 ~~rdH~~lg~~l~l~~~~~~~~G~~~~lP~g~~l~~~l~~~~r~~~-~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~~my 318 (642)
T 1qf6_A 240 AKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKL-KEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMF 318 (642)
T ss_dssp HTTCHHHHHHHTTCEECCTTSTTCCEECHHHHHHHHHHHHHHHHHH-HHTTCEECCCCSEEETHHHHHHSHHHHHGGGCE
T ss_pred ccCCHHHHHHhcCccccccCCCCcEEECCcHHHHHHHHHHHHHHHH-HHcCCEEEECCcCccHHHHhhcCccccccccce
Confidence 358999999999999986 68999999999999999999999877 568999999999999999999999888888888
Q ss_pred EeecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhh
Q psy10095 361 VLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNS 440 (680)
Q Consensus 361 ~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~Rv 440 (680)
..+. ++.+++|.||++ +|++.+|.+.+....+||+|++.+|+|||.|+ ++ ..+||+|+
T Consensus 319 ~~d~----------~~~~~~LrP~~~-~~~~~~~~~~~~syr~LPlr~~~~g~~fR~E~--------~g---~~~GL~R~ 376 (642)
T 1qf6_A 319 TTSS----------ENREYCIKPMNC-PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEP--------SG---SLHGLMRV 376 (642)
T ss_dssp EEEE----------TTEEEEECSSSH-HHHHHHHTTSCEEGGGCSEEEEEEEEEECCCC--------GG---GCBTTTBC
T ss_pred eeec----------CCceEEecCCCC-HHHHHHHHhhhhhccccCeEEEEeccEEecCC--------Cc---cccCCcee
Confidence 8331 134689999997 89999999998888899999999998888873 32 78999999
Q ss_pred hccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCC-ceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecC
Q psy10095 441 IQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNM-KYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLN 517 (680)
Q Consensus 441 HQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~L-pyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~S 517 (680)
|||+++|+..|| +|+++++++++|+..+.++|+.||| +|+| .+++++ +.+..|.|+|.|+.+.+.|+.+++
T Consensus 377 ReF~q~d~~~f~-~~~~~~~e~~~~i~~~~~i~~~lGl~~~~v-~l~~~~----e~~~g~~e~w~~a~~~l~~~l~~~ 448 (642)
T 1qf6_A 377 RGFTQDDAHIFC-TEEQIRDEVNGCIRLVYDMYSTFGFEKIVV-KLSTRP----EKRIGSDEMWDRAEADLAVALEEN 448 (642)
T ss_dssp SEEEEEEEEEEE-CGGGHHHHHHHHHHHHHHHHGGGTCCCCEE-EEECCC----SSCCSCHHHHHHHHHHHHHHHHTT
T ss_pred eeEEEccEEEEc-CHHHHHHHHHHHHHHHHHHHHHcCCCceEE-EEecCc----ccccCCHHHHHHHHHHHHHHHHHc
Confidence 999999999999 8999999999999999999999999 8998 778875 667789999999888888877776
No 18
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A*
Probab=99.89 E-value=4.5e-23 Score=232.50 Aligned_cols=212 Identities=12% Similarity=0.083 Sum_probs=189.6
Q ss_pred CCCChhhhhhcCCcccccCcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEe
Q psy10095 283 EGKNKIDMDALSKYVQYTNRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVL 362 (680)
Q Consensus 283 ~~~~H~elg~~l~l~D~~~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i 362 (680)
..++|..|++. |+++-.++++|++...|+++.++|.+++.+.+ .+.||.+|.+|.|.+.+++.++|..+.+.+++|.+
T Consensus 19 ~~~~h~~l~~~-g~~~~~~~G~~~~lP~g~~~~~~i~~~~~~~~-~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~~m~~~ 96 (572)
T 2j3l_A 19 EVLSHQILLRA-GYIRQVAAGIYSYLPLANRVLEKLKTIMREEF-EKIDAVEMLMPALLPAELWKESGRYETYGPNLYRL 96 (572)
T ss_dssp CSHHHHHHHHT-TSEEEEETTEEEECHHHHHHHHHHHHHHHHHH-HTTTCEECBCCSEEETHHHHHHSHHHHSCTTSCEE
T ss_pred CCcCHHHHHhC-CCccccCCCeeeeCCHHHHHHHHHHHHHHHHH-HHcCCEEEECCccccHHHHHhcCCccccchheEEE
Confidence 56899999986 88887789999999999999999999999876 56899999999999999999999878888888888
Q ss_pred ecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhc
Q psy10095 363 VNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQ 442 (680)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQ 442 (680)
.+. +++.++|.||++ ++++.+|.+.+....+||+|++.+|+|||.|. . | ..||+|+||
T Consensus 97 ~d~---------~~~~~~LrP~~~-~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~--------~--~--~~Gl~R~Re 154 (572)
T 2j3l_A 97 KDR---------NDRDYILGPTHE-ETFTELIRDEINSYKRLPLNLYQIQTKYRDEK--------R--S--RSGLLRGRE 154 (572)
T ss_dssp ECT---------TCCEEEECSCCH-HHHHHHHHHHCCBGGGCCEEEEEEEEEECCCS--------S--C--CTGGGSCSE
T ss_pred ecC---------CCCeEEEccccH-HHHHHHHHhhccChhhcCHhhheecCeeccCc--------C--c--ccCccccce
Confidence 631 235799999997 89999999988776789999999988888872 3 3 799999999
Q ss_pred cceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCCceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecCcchhh
Q psy10095 443 REKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNMKYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLNAKVYI 522 (680)
Q Consensus 443 F~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn~~~~ 522 (680)
|+++++..||.+++++++++.+|+..+.++|+.|||+|+++..++|+||...+ -|.|.++.....+|.+|++|.|.
T Consensus 155 F~q~d~~~f~~~~~~~~~e~~~~~~~~~~~~~~lgl~~~~~~~~~g~~g~~~s----~E~~~~~~~ge~~~~~~~~~~~~ 230 (572)
T 2j3l_A 155 FIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDS----KEFMAISEIGEDTICYSTESDYA 230 (572)
T ss_dssp EEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGTCSSE----EEEEEECTTCSEEEEEESSSSCE
T ss_pred eEEeeeEEEcCCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccccCCCccc----EEEEEEcCCCcceEEEeCCCCcc
Confidence 99999999995589999999999999999999999999999999999999865 59999999999999999988763
No 19
>3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens}
Probab=99.88 E-value=4.9e-23 Score=226.79 Aligned_cols=182 Identities=8% Similarity=-0.116 Sum_probs=140.8
Q ss_pred ceE-EEeCchHHHHHHHHHHHHHHHHhhCC-cEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCce
Q psy10095 303 LDI-HYLGNAAKFEYLIPIILKDYFTVKHN-FMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNH 380 (680)
Q Consensus 303 rfy-yL~G~gA~LE~ALi~y~ld~~~~~~G-f~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~ 380 (680)
++| ++-=.|..|-..|.++....+..+.| +.+|.+|. ..+...+|..-.+ .+|
T Consensus 94 g~~p~~gP~G~~l~~nl~~~w~~~~~~~~~~~~eV~tp~---~~~~~~SGH~d~~----------------------~~~ 148 (459)
T 3ikl_A 94 GCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALH---HKPGPLLPGDSAF----------------------RGG 148 (459)
T ss_dssp TCSCCBCHHHHHHHHHHHHHHHHHHTTSSCSCEECCCCS---BCCSCCCSSCSCC----------------------TTB
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhccCceEeecccc---ccccccCcchhhh----------------------cce
Confidence 345 67778999999999855545554456 77799997 2223333322111 279
Q ss_pred eeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHH
Q psy10095 381 LVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCK 460 (680)
Q Consensus 381 LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~ 460 (680)
|.|.+...++++|+........+||++++.+|+|||.| +|+ ....+||||||||+|+||+.|| +|++|++
T Consensus 149 LRPeTaqg~~~nfk~~~~s~r~~LP~~iaqig~~FR~E--------~g~-~~~~~GL~RvrEFtq~E~~~F~-~Pe~~~e 218 (459)
T 3ikl_A 149 LRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPV--------FDT-KQIRNGVKSIGEKTEASLVWFT-PPRTSNQ 218 (459)
T ss_dssp -CSCSHHHHHHHTTTTTGGGTTBSSEEEEEEEEEECCC-------------------CCCCEEEEEEEEEEE-CGGGHHH
T ss_pred ECCCCChhHHHHHhhhhhhccccCCeEEEEEeeeeecc--------ccc-ccCCCCcccccceeeeeEEEEe-ChhHHHH
Confidence 99944448999999888888889999999988777775 553 3444799999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHcCCc---eEEeecCCCCCCcccccceeeeeeecCCCceeeeeecCcchhhhHH
Q psy10095 461 EFQNIQSLLKSVMDKLNMK---YRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLNAKVYIQIV 525 (680)
Q Consensus 461 ~~eeml~~~e~il~~L~Lp---yRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn~~~~q~~ 525 (680)
+|+.++..+..||+.|||| ||+.+++.++ |.+++|||+|||. .|+|++||||++++|.-
T Consensus 219 ~~~~~~~~~~~~~~~LGi~~~~~r~~~~~~ee----A~~~~DiE~~~p~--G~~E~~g~sn~tDfqL~ 280 (459)
T 3ikl_A 219 WLDFWLRHRLQWWRKFAMSPSNFSSSDCQDEE----GRKGNKLYYNFPW--GKELIETLWNLGDHELL 280 (459)
T ss_dssp HHHHHHHHHHHHHHHHCSSGGGEEEEEECCSS----SSCEEEEEEECSS--CEEEEEEEEEEETHHHH
T ss_pred HHHHHHHHHHHHHHHhCCChhhEEEeecCchH----HHhhcCeEEEcCC--ceEEEeeeeccchhhhh
Confidence 9999999999999999999 9999998777 7889999999999 59999999999999844
No 20
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1
Probab=99.86 E-value=2.4e-21 Score=214.01 Aligned_cols=217 Identities=10% Similarity=0.005 Sum_probs=187.7
Q ss_pred CCChhhhhhcCCcccc--cCcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHH-hhcCCCCCCCCce
Q psy10095 284 GKNKIDMDALSKYVQY--TNRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVE-GYGDHYLSPHDNM 360 (680)
Q Consensus 284 ~~~H~elg~~l~l~D~--~~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~-g~G~~p~~~~~~~ 360 (680)
+..|.+|+.+.||+|+ ..+++|.+...|+.+.++|.+++.+.+ .+.||.+|.+|.|+..++++ ++|....+..++|
T Consensus 8 ~~~~~~l~~~~~li~~~~~~~G~~d~lP~g~~l~~~i~~~~~~~~-~~~G~~ei~tP~l~~~~l~~~~~G~~~~~~~emy 86 (459)
T 1nj8_A 8 SEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLL-DESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVY 86 (459)
T ss_dssp HHHHHHHHHHTSSCBCCSTTSSCCBBCHHHHHHHHHHHHHHHHHH-HHTTCEECBCCSEEEHHHHHHHCSSSGGGGGGCE
T ss_pred cHhHHHHHHhCCCccccCCCCceEEECChHHHHHHHHHHHHHHHH-HHcCCEEeeCCcccCHHHHhhhcCcccccchhhE
Confidence 4679999999999999 457899999999999999999999766 56899999999999999998 5998877777888
Q ss_pred EeecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhh
Q psy10095 361 VLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNS 440 (680)
Q Consensus 361 ~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~Rv 440 (680)
.+...+.+ ..+..++|-||++ +|++.+|.+.+....+||+|+..+|+|||.|. + +++||+|+
T Consensus 87 ~~~d~g~~-----~~~~~l~LRP~~~-~~i~~~~~~~~~s~r~LP~rl~qig~~fR~E~---------~---~~rGl~R~ 148 (459)
T 1nj8_A 87 WVTHGGKT-----QLDVKLALRPTSE-TPIYYMMKLWVKVHTDLPIKIYQIVNTFRYET---------K---HTRPLIRL 148 (459)
T ss_dssp EEEESSSS-----EEEEEEEECSSSH-HHHHHHHHTTCCBTTSCCCCEEEEECCBCCCC---------S---CCBTTTBC
T ss_pred EEeccCcc-----cCCCeeEECCCCc-HHHHHHHHHhhhhcccCCeEEEEEccEecCcc---------C---CCCCceEe
Confidence 77632110 0135699999987 89999999998888899999999999998872 2 38899999
Q ss_pred hccc-eEEEEE-ecCChhHHHHHHHHHHHHHHHHHHHcCCceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecCc
Q psy10095 441 IQRE-KVNLFV-GTNNHENLCKEFQNIQSLLKSVMDKLNMKYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLNA 518 (680)
Q Consensus 441 HQF~-KVE~f~-~~~~pe~S~~~~eeml~~~e~il~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn 518 (680)
+||. +.|... .| +++++++++++|+..+.++|+.|||||++...+..|..+.+..++|||+|||. ++..|++++.+
T Consensus 149 REF~qq~d~~~~~~-~~~~a~~e~~~~i~~~~~~~~~LGl~~~~~~~~~~ek~~ga~~~~~ie~~~~d-g~~~e~gt~~~ 226 (459)
T 1nj8_A 149 REIMTFKEAHTAHS-TKEEAENQVKEAISIYKKFFDTLGIPYLISKRPEWDKFPGAEYTMAFDTIFPD-GRTMQIATVHN 226 (459)
T ss_dssp SBCSCEEEEEEEES-SHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECTTSCCTTCSEEEEEEEECTT-SCEEEEEEEEE
T ss_pred eeeeccCcEEEEEC-CHHHHHHHHHHHHHHHHHHHHHCCCceEEeecCchhhcCCcccceeEEEEcCC-CcEEEEEEEee
Confidence 9999 999876 56 89999999999999999999999999999998888988889999999999996 67789998887
Q ss_pred chh
Q psy10095 519 KVY 521 (680)
Q Consensus 519 ~~~ 521 (680)
+..
T Consensus 227 lg~ 229 (459)
T 1nj8_A 227 LGQ 229 (459)
T ss_dssp EET
T ss_pred ccc
Confidence 653
No 21
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A*
Probab=99.84 E-value=1.9e-21 Score=217.14 Aligned_cols=222 Identities=5% Similarity=-0.092 Sum_probs=174.9
Q ss_pred ChhhhhhcCCcccccC------cceEEEeCchHHHHHHHHHHHHHHHH-hhCCcEeeccCcccchHHHHhhcCCCCCCCC
Q psy10095 286 NKIDMDALSKYVQYTN------RLDIHYLGNAAKFEYLIPIILKDYFT-VKHNFMPFTNTDLCKGVIVEGYGDHYLSPHD 358 (680)
Q Consensus 286 ~H~elg~~l~l~D~~~------srfyyL~G~gA~LE~ALi~y~ld~~~-~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~ 358 (680)
.|++|+.+.|+|.... +++|.+...|++|.++|.+|..+.+. .+.||.+|.+|.|++.++++++|+.+.+.+.
T Consensus 7 ~~~~l~~r~g~i~~~~ei~~~~~G~~d~~P~G~~l~~~l~~~~r~~~~~~~~g~~ev~tP~l~~~~l~~~SGh~~~f~d~ 86 (505)
T 1ati_A 7 ELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADP 86 (505)
T ss_dssp HHHHHHHHTTSEEETTGGGTCCTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHHHHCEEE
T ss_pred HHHHHHHHCCCEEcchhhcCCCCCcceeCccHHHHHHHHHHHHHHHHHHhhCCcEEEEccccCCHHHHHhcCChhhcCcc
Confidence 4788999999886543 79999999999999999999998764 2679999999999999999999999998887
Q ss_pred ceEeecC-----------C----------------Cccccc------c-----------------cc-------------
Q psy10095 359 NMVLVNN-----------E----------------NDLSEI------G-----------------YE------------- 375 (680)
Q Consensus 359 ~~~i~~~-----------~----------------~~~~~~------~-----------------~~------------- 375 (680)
+|..... + ++++.+ . +.
T Consensus 87 m~~~~~~~~~~r~d~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~i~~p~~~~~~m~~~~~~cp~~~~~~~~~~~~~fn 166 (505)
T 1ati_A 87 MVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFN 166 (505)
T ss_dssp EEEC--------------------------------------------------------------------CCCCEEEE
T ss_pred ceeccccccccchhhhhhhhhhhhccccccccccHHHHHHHHHhhccccccccccccccccccCCccCccccccccchhh
Confidence 7763210 0 000000 0 00
Q ss_pred -------------CCCceeeccchhhhhhhhhcccccCC-CCCCceEeeeCcccCCCccccccccccCCCCCcccchhhh
Q psy10095 376 -------------ERRNHLVGSAHMSMFCAYHTNHSVNV-KDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSI 441 (680)
Q Consensus 376 -------------~~~l~LigTaeevpl~~~~~~e~l~~-~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvH 441 (680)
...++|-|++. +++...|.+.+... .+||++++.+|+|||.|+ + --.||+|+|
T Consensus 167 lmf~t~~gpt~ee~~~~~LRPE~t-~~i~~~~~~~~~sy~r~LP~rl~qig~~FR~E~--------~----pr~GL~R~R 233 (505)
T 1ati_A 167 MMFQDLRGPRGGRGLLAYLRPETA-QGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEI--------T----PRNFIFRVR 233 (505)
T ss_dssp CBEEEECSSCCCGGGEEEECSSSH-HHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCS--------S----CCTGGGSCS
T ss_pred hhhhcccCCccccccceeecccch-hHHHHHHHHHHHhcCCCCCEEEEEeeceeeCCC--------C----CCCCCCccc
Confidence 12345656554 44544444333333 699999999888888873 3 345999999
Q ss_pred ccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCCceEEeecCC---CCCCcccccceeeeeeecCCCceeeeeecCc
Q psy10095 442 QREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNMKYRICKAPA---DVLHTSESHRLEYQVYSYSLNSWVTCMDLNA 518 (680)
Q Consensus 442 QF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~LpyRVv~m~t---gdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn 518 (680)
||+++|+..+| +|+++.+++++|+..+..||+.|||||++|.+++ +++.+.+..++|+|+|+|. .|.|+++|++
T Consensus 234 EF~q~d~~~f~-~~e~~~~~~~~~i~~~~~i~~~LGl~~~~v~~~~~~~~~~~~~~~~~~d~E~~~p~--~~~e~~g~~~ 310 (505)
T 1ati_A 234 EFEQMEIEYFV-RPGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPESSAHYAKATVDILYRFPH--GSLELEGIAQ 310 (505)
T ss_dssp EEEEEEEEEEE-CGGGHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECCTTTSCTTCSEEEEEEEEETT--EEEEEEEEEE
T ss_pred ceEEeeEEEEE-CHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEECCCChHhhhcccHHHHhHHhhcCC--CCccchhhhc
Confidence 99999999999 9999999999999999999999999988787776 6787778888999999996 6999999999
Q ss_pred chhhh
Q psy10095 519 KVYIQ 523 (680)
Q Consensus 519 ~~~~q 523 (680)
+.+++
T Consensus 311 ~~d~~ 315 (505)
T 1ati_A 311 RTDFD 315 (505)
T ss_dssp CTTHH
T ss_pred cccee
Confidence 99888
No 22
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A
Probab=99.82 E-value=6.6e-20 Score=203.46 Aligned_cols=214 Identities=7% Similarity=-0.056 Sum_probs=177.2
Q ss_pred CChhhhhhcCCccccc-CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHh-hcCCCCCCCCceEe
Q psy10095 285 KNKIDMDALSKYVQYT-NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEG-YGDHYLSPHDNMVL 362 (680)
Q Consensus 285 ~~H~elg~~l~l~D~~-~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g-~G~~p~~~~~~~~i 362 (680)
..|.+|+.+.|++++. .+++|.+...|+.+.++|.+++.+.+ .+.||.+|.+|.|+..+++.+ +|....+.+++|.+
T Consensus 16 ~~~~~l~~~~~li~~~~~~G~~d~lP~g~~l~~~I~~~~r~~~-~~~G~~ei~tP~l~~~el~~~~sgh~d~f~~emy~~ 94 (477)
T 1hc7_A 16 EWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMF-KETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVV 94 (477)
T ss_dssp HHHHHHHHHTTSEEECSSTTCEEECHHHHHHHHHHHHHHHHHH-HHTTCEECBCCSEEESTTC---------CCTTCEEE
T ss_pred HHHHHHHHHCCCeeecCCCCeEEECccHHHHHHHHHHHHHHHH-HHcCCEEEecCccccHHHHhhcCCcccccccceEEE
Confidence 5799999999999986 57899999999999999999999776 568999999999999999988 99888888888887
Q ss_pred ecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhc
Q psy10095 363 VNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQ 442 (680)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQ 442 (680)
...+.+ ..+..++|-||++ .+++.+|.+.+....+||+|+.-+|+|||.|. .++||+|++|
T Consensus 95 ~d~g~~-----~l~~~l~LRP~~~-~~i~~~~~~~~~s~r~LP~rl~qig~vfR~E~-------------~~rGl~R~RE 155 (477)
T 1hc7_A 95 THAGGE-----ELEEPLAVRPTSE-TVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEM-------------RTRPFLRTSE 155 (477)
T ss_dssp EEESSS-----EEEEEEEECSCSH-HHHHHHHHHHCCBGGGCCEEEEEEEEEECCCS-------------SCBTTTBCSE
T ss_pred ECCCCc-----cCCCeEEEcCCCc-HHHHHHHHhhhhccccCCeeeEeecCEEeCCC-------------CCCCcceeEE
Confidence 642110 0134689999987 89999999988877799999999999998873 2789999999
Q ss_pred cceEEEEE-ecCChhHHHHHHHHHHHHHHHHH-HHcCCceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecCcch
Q psy10095 443 REKVNLFV-GTNNHENLCKEFQNIQSLLKSVM-DKLNMKYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLNAKV 520 (680)
Q Consensus 443 F~KVE~f~-~~~~pe~S~~~~eeml~~~e~il-~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn~~ 520 (680)
|.+.|+.. .| +++++++++..|++.+.++| +.|||||++...+..+.-+.+..++|||+|||. ++..+++.+.+..
T Consensus 156 F~q~d~~~~~~-~~~~ad~E~~~~l~~~~~i~~~~Lgl~~~~~~~~~~e~~~g~~~~~~ie~~~~d-gr~~~~gt~~~lg 233 (477)
T 1hc7_A 156 FLWQEGHTAHA-TREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKD-GKALQAGTSHYLG 233 (477)
T ss_dssp EEEEEEEEEES-SHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCTTTSCTTSSEEEEEEEECTT-SCEEEEEEEEEEE
T ss_pred EEEccEEEEeC-CHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEeCChHHhcCCcccceEEEEEcCC-CcEEEEeeeEEcc
Confidence 99999999 66 89999999999999999999 899999999888877877777789999999997 4455777666553
No 23
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A*
Probab=99.81 E-value=7.7e-21 Score=217.67 Aligned_cols=200 Identities=11% Similarity=0.096 Sum_probs=173.5
Q ss_pred CCCChhhhhhcCCccccc---CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCc
Q psy10095 283 EGKNKIDMDALSKYVQYT---NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDN 359 (680)
Q Consensus 283 ~~~~H~elg~~l~l~D~~---~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~ 359 (680)
..+||..||+++++|+|. ++++|++...|+.+.++|.+|+.+.+ .+.||.+|.+|.|.+.++++++|....+.+++
T Consensus 239 ~~rdhr~lg~~l~l~~~~~~~~~G~~~~lP~g~~~~~~l~~~ir~~~-~~~Gy~eV~tP~l~~~~l~~~sG~~d~~~~~m 317 (645)
T 1nyr_A 239 KERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKE-VSMGYDHVYTPVLANVDLYKTSGHWDHYQEDM 317 (645)
T ss_dssp HHTCHHHHHHHTTCEEEETTTEEEEEEECHHHHHHHHHHHHHHHHHH-HHTTEEECBCCSEEETHHHHHHTHHHHCTTSS
T ss_pred hhhhHHHHhhhcceEEecccCCCceeEECCCHHHHHHHHHHHHHHHH-HHcCCEEEECCeeccHHHHhhCCCccccccCc
Confidence 358999999999999886 46899999999999999999999877 56899999999999999999999777777888
Q ss_pred eEeecCCCccccccccC-CCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccch
Q psy10095 360 MVLVNNENDLSEIGYEE-RRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLY 438 (680)
Q Consensus 360 ~~i~~~~~~~~~~~~~~-~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~ 438 (680)
|.+.. .++ .+++|-|+++ +|++.+|.+......+||+|++-+|+|||.|. . ....||+
T Consensus 318 f~~~d---------~~~~~~~~LrP~~~-~~~~~~~~~~~~syr~LPlrl~~~g~~fR~E~--------~---~~~~GL~ 376 (645)
T 1nyr_A 318 FPPMQ---------LDETESMVLRPMNC-PHHMMIYANKPHSYRELPIRIAELGTMHRYEA--------S---GAVSGLQ 376 (645)
T ss_dssp CCCEE---------ETTTEEEEECSSSH-HHHHHHHHTSCCBGGGCCEEEEEEEEEECCCC--------T---TTCBTTT
T ss_pred ceeEe---------cCCCeEEEeCCCCC-HHHHHHHHhhhhhccCCCeEEEEeccEEecCC--------C---ccccCcc
Confidence 87642 113 4689999987 89999999987777799999999999999873 2 1579999
Q ss_pred hhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCC-ceEEeecCCCCCCcccccceeeeeeecC
Q psy10095 439 NSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNM-KYRICKAPADVLHTSESHRLEYQVYSYS 506 (680)
Q Consensus 439 RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~L-pyRVv~m~tgdLg~~a~kkyDIEvW~P~ 506 (680)
|++||++.++..|| +++++.+++.+++..+.++|+.||| +|+| .+++.++++.+....|.|+|.+.
T Consensus 377 R~ReF~Q~d~~~f~-~~~~~~d~~~e~i~~~~~~l~~lGl~~~~~-~l~~~~~~~~e~~~g~~e~~~~~ 443 (645)
T 1nyr_A 377 RVRGMTLNDSHIFV-RPDQIKEEFKRVVNMIIDVYKDFGFEDYSF-RLSYRDPEDKEKYFDDDDMWNKA 443 (645)
T ss_dssp BCSEEEEEEEEEEE-CGGGHHHHHHHHHHHHHHHHHHTTCCCEEE-EEEECCCCCSSSSSCCHHHHHHH
T ss_pred eeeeEEEccEEEEc-CHHHHHHHHHHHHHHHHHHHHHcCCCeEEE-EEeCCCcccchhhcCChHHHHHH
Confidence 99999999999999 8999999999999999999999999 7988 67777777667677788888654
No 24
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A
Probab=99.74 E-value=1.8e-18 Score=191.39 Aligned_cols=176 Identities=7% Similarity=0.076 Sum_probs=150.2
Q ss_pred CCCChh--hhhhcCCcccccCcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCce
Q psy10095 283 EGKNKI--DMDALSKYVQYTNRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNM 360 (680)
Q Consensus 283 ~~~~H~--elg~~l~l~D~~~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~ 360 (680)
++++|+ +||+.++++ .++++|.+...|+.+.++|.+++.+.+ .+.||.+|.+|.|...+++.++|..+.+.+++|
T Consensus 20 ~~~~h~~~~lg~~~~~~--~~~G~~d~lP~g~~~~~~i~~~~~~~~-~~~G~~ei~tP~l~~~~l~~~sg~~~~~~~emy 96 (471)
T 3a32_A 20 VKPDSRVPVFNREFATF--TGAGVPLFSLGGGPIRYALAEVLAKFH-ARRGYYVVETPIIASTELFKVSGHIEFYRNNMY 96 (471)
T ss_dssp CCTTSBCTTTCSBTHHH--HCTTCCCBCTTHHHHHHHHHHHHHHHH-HHTTCEECCCCSEEETHHHHHTCCCTTGGGGSE
T ss_pred ccCCchhHHHHHhcCCc--cCCEEEEECchHHHHHHHHHHHHHHHH-HHcCCEEEECCeeeehHHhhhccCccccccceE
Confidence 346666 666666655 578999999999999999999999876 568999999999999999999998778888888
Q ss_pred EeecCCCccccccccCCCceeeccchhhhhhhhhcccccCCC---CCCceEeeeCcccCCCccccccccccCCCCCcccc
Q psy10095 361 VLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVK---DLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENL 437 (680)
Q Consensus 361 ~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~---~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL 437 (680)
.++. ++..++|-||++ +|++.+|.+.+-... +||+|++.+|+|||.|. .. .++||
T Consensus 97 ~~d~----------~~~~l~LRP~~t-~~i~~~~~~~~~s~r~~~~lP~rl~~~g~vfR~E~--------~~---~~~Gl 154 (471)
T 3a32_A 97 LFDI----------EGHEFAVKPMNC-PYHILLFLNEVAKHRSKLPLPFKVFEFGRVHRYEP--------SG---SIYGL 154 (471)
T ss_dssp EEEE----------TTEEEEECSCSH-HHHHHHHHHHHHHHGGGSCSSEEEEEEEEEECCCC--------GG---GCBTT
T ss_pred EEec----------CCcEEEEccccH-HHHHHHHHhhhhhccccccCCeEEeeccceeccCC--------Cc---ccccc
Confidence 8742 234689999997 899999988866554 89999999998888873 22 26999
Q ss_pred hhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHH-cCC-----ceEEee
Q psy10095 438 YNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDK-LNM-----KYRICK 484 (680)
Q Consensus 438 ~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~-L~L-----pyRVv~ 484 (680)
+|+|||+++++..|| .++++.+++.+|+..+.++|+. ||| +|+++.
T Consensus 155 ~R~REF~Q~~~e~f~-~~~~~~de~~e~i~~~~~~l~~~lGl~~~~~~~~l~i 206 (471)
T 3a32_A 155 LRVRGFTQDDAHIIV-PGGRVIDVVYDVFEEMKLVLERLFKLGVSSETFKVRL 206 (471)
T ss_dssp TBCSEEEEEEEEEEE-EGGGHHHHHHHHHHHHHHHHHHTSCCCCSTTTEEEEE
T ss_pred eeEEEEEECCeEEEc-ChHHHHHHHHHHHHHHHHHHHHhhCCCcCCCCeEEEE
Confidence 999999999999999 8999999999999999999999 999 598763
No 25
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A*
Probab=99.74 E-value=5.4e-18 Score=186.91 Aligned_cols=191 Identities=9% Similarity=-0.006 Sum_probs=166.1
Q ss_pred CCCChhhhhhcCCcccccCcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEe
Q psy10095 283 EGKNKIDMDALSKYVQYTNRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVL 362 (680)
Q Consensus 283 ~~~~H~elg~~l~l~D~~~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i 362 (680)
+.++|..|+.. |++....+++|.+...|+++.++|.+++.+.+ .+.||.+|.+|.|...+++.++|....+.+++|.+
T Consensus 39 ~~~~h~ll~r~-g~i~~~~~G~~d~lP~g~~~~~~i~~~ir~~~-~~~G~~ei~tP~l~~~el~~~sg~~d~~~~em~~~ 116 (458)
T 2i4l_A 39 EIVSHRLMLRA-GMLRQEAAGIYAWLPLGHRVLKKIEQIVREEQ-NRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRI 116 (458)
T ss_dssp CSHHHHHHHHT-TCEEEEETTEEEECHHHHHHHHHHHHHHHHHH-HHTTCEECBCCSEEEHHHHHHHTHHHHSCTTSEEE
T ss_pred CcchHHHHhhc-CCeeccCCcceEECCCHHHHHHHHHHHHHHHH-HHcCCEEEEcCccCcHHHHHhcCCccccccceEEE
Confidence 56899988876 88888889999999999999999999999877 56899999999999999999999755667788887
Q ss_pred ecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhc
Q psy10095 363 VNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQ 442 (680)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQ 442 (680)
.+. ++.+++|-||+| ...+.++++.+-...+||+|++.+|+|||.|+ . + ..||+|++|
T Consensus 117 ~d~---------~~~~~~LrPt~e-e~t~~i~r~~~~s~~~lP~rl~~ig~~fR~E~--------~--p--~~Gl~R~RE 174 (458)
T 2i4l_A 117 ADR---------HKRELLYGPTNE-EMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQ--------R--P--RFGVMRGRE 174 (458)
T ss_dssp ECT---------TCCEEEECSCCH-HHHHHHHHHHCCBGGGCSEEEEEEEEEECCCS--------S--C--BTGGGBCSE
T ss_pred EeC---------CCCeEEECCCCh-HHHHHHHHHHHhhccccCeeeEEecCEeeCCC--------C--C--CCCcccccc
Confidence 631 235789999987 56788888877766799999999998888872 2 2 689999999
Q ss_pred cceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCCceEEeecCCCCCCcccccc
Q psy10095 443 REKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNMKYRICKAPADVLHTSESHR 497 (680)
Q Consensus 443 F~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~LpyRVv~m~tgdLg~~a~kk 497 (680)
|+++++..|+.+++++++++..|+..+.++|+.|||+|+++...+|.+|...++.
T Consensus 175 F~q~d~~~f~~~~~~ad~e~~~~~~~~~~i~~~lGl~~~~~~~~~g~~gg~~s~e 229 (458)
T 2i4l_A 175 FLMKDAYSFDVDEAGARKSYNKMFVAYLRTFARMGLKAIPMRAETGPIGGDLSHE 229 (458)
T ss_dssp EEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTTCCEEEEECCCCSSCSSCEEE
T ss_pred eEEeEEEEEECCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEccccccCCccchh
Confidence 9999999999778889999999999999999999999999999999999887664
No 26
>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B*
Probab=99.53 E-value=4.6e-15 Score=163.82 Aligned_cols=219 Identities=8% Similarity=-0.038 Sum_probs=154.4
Q ss_pred CChhhhhhcCCcccccC---------cceE-EEeCchHHHHHHHHHHHHHHHH-hhCCcEeeccCcccchHHHHhh--cC
Q psy10095 285 KNKIDMDALSKYVQYTN---------RLDI-HYLGNAAKFEYLIPIILKDYFT-VKHNFMPFTNTDLCKGVIVEGY--GD 351 (680)
Q Consensus 285 ~~H~elg~~l~l~D~~~---------srfy-yL~G~gA~LE~ALi~y~ld~~~-~~~Gf~~i~~P~~Vr~~v~~g~--G~ 351 (680)
..+++|+.+.|++.... +++| ++.=.|+.|-..|.+|....+. .+.||.+|.+|.|+...+..+. |.
T Consensus 25 ~~~~~l~krrgf~~~s~eiy~g~~~~~G~~~~~~P~G~~l~~~i~~~~~~~~~~~~~g~~ev~tp~l~~~~~~~~s~~g~ 104 (454)
T 1g5h_A 25 EALVDLCRRRHFLSGTPQQLSTAALLSGCHARFGPLGVELRKNLASQWWSSMVVFREQVFAVDSLHQEPGSSQPRDSAFR 104 (454)
T ss_dssp CHHHHHHHHTTSBCCCGGGGSHHHHHHCCSCCBCHHHHHHHHHHHHHHHHHHTTTCTTEEECCCCSEECCCCSSCCCCCE
T ss_pred HHHHHHHHHcCCccccchhcccCCCCCcceeeeCchHHHHHHHHHHHHHHHHhhhcCCeEEEEcCccCChhhccccccCc
Confidence 46889999999875432 1434 7888899999999998887643 4679999999999888765543 21
Q ss_pred CCCCCCCceE----eec-CCCccccc--cccCCCceeec-cchhhhhhhhhcccccCCCCCCceEeeeCcccC---CCcc
Q psy10095 352 HYLSPHDNMV----LVN-NENDLSEI--GYEERRNHLVG-SAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYG---FHNL 420 (680)
Q Consensus 352 ~p~~~~~~~~----i~~-~~~~~~~~--~~~~~~l~Lig-Taeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr---~Ea~ 420 (680)
..+ -+.|. ..+ ..+++..+ ......+||.| |+. ..+.+|.........+||++++.+|+||| .|
T Consensus 105 ~~r--~d~~~e~~~~~g~~~eem~~~~~~~~~~~~~LRPeta~-g~~~~f~~~~~s~r~~LP~~~aqig~~fR~~~nE-- 179 (454)
T 1g5h_A 105 LVS--PESIREILQDREPSKEQLVAFLENLLKTSGKLRATLLH-GALEHYVNCLDLVNRKLPFGLAQIGVCFHPVSNS-- 179 (454)
T ss_dssp EEC--HHHHHHHHCC---CHHHHHHHHHHHHHHSCEECSCSHH-HHHHTHHHHHHHTTTBSCEEEEEEEEEEEEEC----
T ss_pred ccH--HHHHHHHhhccCCCHHHHHHHHHhhcCcceeecccccH-HHHHHHhhhHhhcccCCCEEEEEeeeeccCCccc--
Confidence 000 00110 000 00001000 00123579999 554 67788776666666799999999888887 35
Q ss_pred ccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCCc---eEEeecCCCCCCcccccc
Q psy10095 421 LCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNMK---YRICKAPADVLHTSESHR 497 (680)
Q Consensus 421 ~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~Lp---yRVv~m~tgdLg~~a~kk 497 (680)
+ | + ..||+|+|+|++.|+..|| +|+++.++|+.++.....+|+.|||| ||..+. .++. +..+
T Consensus 180 ------~-s-~--~~Gl~R~REF~q~E~~~F~-~pe~~~e~~~~~~~~~~~~~~~lgi~~~~~r~~~~-~~~~---a~~~ 244 (454)
T 1g5h_A 180 ------N-Q-T--PSSVTRVGEKTEASLVWFT-PTRTSSQWLDFWLRHRLLWWRKFAMSPSNFSSADC-QDEL---GRKG 244 (454)
T ss_dssp -----------------CEEEEEEEEEEEEEE-CHHHHHHHHHHHHHHHHHHHHTTCSSGGGEEEEEE-ECTT---SCEE
T ss_pred ------c-c-C--CCCccccCceehhheEEEe-CHhhHHHHHHHHHHHHHHHHHHcCCCceeEEecCC-HHHH---HhcC
Confidence 3 3 2 6999999999999999999 99999999999999999999999998 887664 2333 6789
Q ss_pred eeeeeeecCCCceeeeeecCcchhhhHH
Q psy10095 498 LEYQVYSYSLNSWVTCMDLNAKVYIQIV 525 (680)
Q Consensus 498 yDIEvW~P~~~~Y~EisS~Sn~~~~q~~ 525 (680)
+|||+|+|. .|+|+.+|+++++++..
T Consensus 245 ~~ie~~~p~--g~~e~~g~~~~td~~l~ 270 (454)
T 1g5h_A 245 SKLYYSFPW--GKEPIETLWNLGDQELL 270 (454)
T ss_dssp EEEEEEETT--EEEEEEEEEEEESHHHH
T ss_pred CCcEEecCC--CceEEEEecCCCHHHHH
Confidence 999999996 79999999999887743
No 27
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1
Probab=99.40 E-value=5e-13 Score=144.68 Aligned_cols=154 Identities=10% Similarity=0.084 Sum_probs=118.2
Q ss_pred cceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhh--cCCCCCCCCceEeecCCCccccccccCCCc
Q psy10095 302 RLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGY--GDHYLSPHDNMVLVNNENDLSEIGYEERRN 379 (680)
Q Consensus 302 srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~--G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l 379 (680)
+++|.+.+.++++.++|.+++.+.+ .++||.+|.+|.|...+++.++ |....+.+++|.+.+ .++..+
T Consensus 6 ~G~~~~~p~~~~~~~~i~~~~~~~~-~~~G~~ei~tP~l~~~~l~~~~~g~~~~~~~~~m~~~~D---------~~g~~~ 75 (420)
T 1qe0_A 6 RGTQDILPEDSKKWRYIENQLDELM-TFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKD---------KGDRSI 75 (420)
T ss_dssp TTCCCBCHHHHHHHHHHHHHHHHHH-HHHTCEECBCCSEEEHHHHCC-----------CCEEECH---------HHHCCE
T ss_pred CcccccCHHHHHHHHHHHHHHHHHH-HHcCCEEccCcccchHHHhhhccCCccchhhhheEEEEc---------CCCCEE
Confidence 5788899999999999999999877 4579999999999999999998 766667777887753 124579
Q ss_pred eeeccchhhhhhhhhcccccCC-CCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHH
Q psy10095 380 HLVGSAHMSMFCAYHTNHSVNV-KDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENL 458 (680)
Q Consensus 380 ~LigTaeevpl~~~~~~e~l~~-~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S 458 (680)
+|-||.+ +|++.++.++.... .+||+|++.+|+|||.|. ... .|++||.+++...|+ .++.+
T Consensus 76 ~Lrp~~t-~~~~r~~~~~~~~~~~~lP~r~~~~g~vfR~E~--------~~~-------gR~reF~q~~~e~~~-~~~~~ 138 (420)
T 1qe0_A 76 TLRPEGT-AAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYER--------KQK-------GRYRQFNQFGVEAIG-AENPS 138 (420)
T ss_dssp EECSCSH-HHHHHHHHHTTGGGCSSCSEEEEEEEEEECC----------------------CCEEEEEEEEEES-CCCHH
T ss_pred EeCCCCh-HHHHHHHHhccccccCCCCeEEEEecCEeecCC--------CcC-------CCcccEEEeeEEEEC-CCCch
Confidence 9999987 89999999887766 799999999988888862 322 499999999999998 55443
Q ss_pred HHHHHHHHHHHHHHHHHcCCc-eEEee
Q psy10095 459 CKEFQNIQSLLKSVMDKLNMK-YRICK 484 (680)
Q Consensus 459 ~~~~eeml~~~e~il~~L~Lp-yRVv~ 484 (680)
.+ .|++..+.++|+.|||+ |++..
T Consensus 139 ~d--~e~i~~~~~~l~~lgl~~~~i~l 163 (420)
T 1qe0_A 139 VD--AEVLAMVMHIYQSFGLKHLKLVI 163 (420)
T ss_dssp HH--HHHHHHHHHHHHHTTCCCEEEEE
T ss_pred hH--HHHHHHHHHHHHHcCCCceEEEE
Confidence 33 78999999999999998 88764
No 28
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=99.38 E-value=4.1e-14 Score=130.75 Aligned_cols=77 Identities=27% Similarity=0.428 Sum_probs=37.2
Q ss_pred hcccccccCCCC-C-CCccc----ccc---CCccccccCCCCccceecc---------------------------CCCC
Q psy10095 595 IRGTRKRARGLG-C-EDGAE----LNM---KDSLDANLVQMSTNYCLVL---------------------------RKPY 638 (680)
Q Consensus 595 ~~g~r~~~R~v~-~-~D~~~----~~l---~~~~d~~~pg~g~~yc~~c---------------------------~~py 638 (680)
+..+|.+.|++| | +|-.+ +-+ ++++|+|+||.|+|||+.| ++||
T Consensus 8 ~~~tkrr~rDlDqI~~dl~~e~~~k~~~~~~~~~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK~HKrrvk~l~~~p~ 87 (124)
T 1zr9_A 8 LEKAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQLSVEPY 87 (124)
T ss_dssp ----------------------------CCSCSSCSSSGGGGCSEETTTTEECSSHHHHHHHTTCHHHHHHHHHHTSCSS
T ss_pred HHhhcccCCCHHHHHHHHHhHHHHHhhccccccccccCCCCcceEcccCcchhCCHHHHHHHHhhhhhhHHHHHhccCCC
Confidence 456788888888 3 23221 112 6799999999999999999 9999
Q ss_pred ChHHHHHhhcCCcccCcccccccccchhhhccc
Q psy10095 639 TVEESERAAGYGSYQTPKIRKLQTQSLDKTAEY 671 (680)
Q Consensus 639 t~~~ae~a~g~~~~~~~~~~~~~~~~~~~~~~~ 671 (680)
|++|||+|||||+|++|++.+++||++++.|+.
T Consensus 88 Tq~eAe~aag~g~~~~~~~~~~~~~~~~~~~~~ 120 (124)
T 1zr9_A 88 SQEEAERAAGMGSYVPPRRLAVPTEVSTEVPEM 120 (124)
T ss_dssp CTTTSSCSCCCCCCC------------------
T ss_pred cHHHHHHhccCCCCCCCcccccccccccccccc
Confidence 999999999999999999999999999888774
No 29
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A
Probab=99.13 E-value=3.4e-10 Score=118.25 Aligned_cols=160 Identities=9% Similarity=0.059 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhhhhc
Q psy10095 316 YLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHT 395 (680)
Q Consensus 316 ~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~ 395 (680)
++|.+++.+.+. ..||++|.+|.|+..+.++.+|..+. ++.|.+.+ . -..+++|-++.+ .+++.+++
T Consensus 74 ~~l~~~ir~~~~-~~Gf~EV~tP~Le~~~l~~~~g~~~~--~~m~~~~n---p------l~e~~~LRp~l~-p~l~~~~r 140 (288)
T 3dsq_A 74 LELEEKLAKALH-QQGFVQVVTPTIITKSALAKMTIGED--HPLFSQVF---W------LDGKKCLRPMLA-PNLYTLWR 140 (288)
T ss_dssp HHHHHHHHHHHH-TTTCEECCCCSEEEHHHHHTTSSCC----CCTTTSC---E------EETTEEECSCSH-HHHHHHHH
T ss_pred HHHHHHHHHHHH-HCCCEEEECCeeecHHHHhhcCCCcc--cccEEeec---c------cccchhhhhcCh-HHHHHHHH
Confidence 567777776654 57999999999999999999997552 12221110 0 013468877665 55665554
Q ss_pred ccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHH
Q psy10095 396 NHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDK 475 (680)
Q Consensus 396 ~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~ 475 (680)
..+ ...++|+|++.+|+|||.|+ + |..|++||+++|.+.++ .++. ..|.++...++++|+.
T Consensus 141 ~~~-~~~~~PlrlfeiG~vFR~E~--------~-------~~~r~~EF~qle~~i~g-~~~~--~~f~elkg~le~ll~~ 201 (288)
T 3dsq_A 141 ELE-RLWDKPIRIFEIGTCYRKES--------Q-------GAQHLNEFTMLNLTELG-TPLE--ERHQRLEDMARWVLEA 201 (288)
T ss_dssp HHT-TTSCSCEEEEEEEEEECSCC--------S-------SSCCCSEEEEEEEEEET-CCGG--GHHHHHHHHHHHHHHH
T ss_pred HHH-hCCCCCEEEEEEeeEEecCC--------C-------CCCcCccEEEEEEEEEc-CCch--hhHHHHHHHHHHHHHH
Confidence 432 33789999999999999972 2 44578999999999999 5443 3589999999999999
Q ss_pred cCC-ceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecC
Q psy10095 476 LNM-KYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLN 517 (680)
Q Consensus 476 L~L-pyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~S 517 (680)
||| +|++..-+. +. -.+.+||- . .|.||.+|+
T Consensus 202 LGl~~~~~~~~s~-e~---~~~~~~l~--~----~~~eig~~G 234 (288)
T 3dsq_A 202 AGIREFELVTESS-VV---YGDTVDVM--K----GDLELASGA 234 (288)
T ss_dssp HTCCCCEEEECCC-CS---SCCCEEEE--E----TTEEEEEEE
T ss_pred cCCCCcEEecCCc-ce---EEEEEEEE--e----CCEEEEEEE
Confidence 999 799876433 21 13445552 2 378999998
No 30
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis}
Probab=98.86 E-value=4e-09 Score=116.70 Aligned_cols=152 Identities=9% Similarity=0.029 Sum_probs=115.8
Q ss_pred cceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhh-cCCCC-CCCCceEeecCCCccccccccCCCc
Q psy10095 302 RLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGY-GDHYL-SPHDNMVLVNNENDLSEIGYEERRN 379 (680)
Q Consensus 302 srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~-G~~p~-~~~~~~~i~~~~~~~~~~~~~~~~l 379 (680)
++++.+...++.+.+.|.+++.+.+ .++||.+|.||.|...+++.++ |.... ..+++|.+.+.+ ++..+
T Consensus 36 ~G~~d~lP~~~~~~~~l~~~i~~~~-~~~Gy~eI~tP~le~~el~~~~~G~~~d~~~~~my~~~D~~--------~g~~l 106 (467)
T 4e51_A 36 KGMNDILPQDAGLWEFFEATVKSLL-RAYGYQNIRTPIVEHTPLFTRGIGEVTDIVEKEMYSFVDAL--------NGENL 106 (467)
T ss_dssp TTCCCBCHHHHHHHHHHHHHHHHHH-HHTTCEECBCCSEEEHHHHHHHTCTTSHHHHHTCCEEECTT--------TCCEE
T ss_pred CCceeeCHHHHHHHHHHHHHHHHHH-HHcCCEEEECCccccHHHhhhccCCcccccccceEEEecCC--------CCCEE
Confidence 5788899999999999999999876 5689999999999999999988 85332 235677776311 13568
Q ss_pred eeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccce--EEEEEecCChhH
Q psy10095 380 HLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREK--VNLFVGTNNHEN 457 (680)
Q Consensus 380 ~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~K--VE~f~~~~~pe~ 457 (680)
.|-|+.. +|++-++....... .||+|++-+|+|||.|. ... -|+.||.. +|+|+.. .+.
T Consensus 107 ~LRPd~t-~~~ar~~~~~~~~~-~lP~r~~~~g~vfR~E~--------~~~-------gR~ReF~Q~d~ei~g~~-~~~- 167 (467)
T 4e51_A 107 TLRPENT-AAVVRAAIEHNMLY-DGPKRLWYIGPMFRHER--------PQR-------GRYRQFHQVGVEALGFA-GPD- 167 (467)
T ss_dssp EECSCSH-HHHHHHHHHTTTTT-TSCEEEEEEEEEECCCC--------C----------CCSEEEEEEEEEETCC-CSH-
T ss_pred EeCcccH-HHHHHHHHHccccc-CCCEEEEEEccEEccCC--------CCC-------CCcCceEEEEEEEEeCC-ChH-
Confidence 8999886 89999998876665 69999999998888862 222 26668877 6666544 333
Q ss_pred HHHHHHHHHHHHHHHHHHcCC-ceEEee
Q psy10095 458 LCKEFQNIQSLLKSVMDKLNM-KYRICK 484 (680)
Q Consensus 458 S~~~~eeml~~~e~il~~L~L-pyRVv~ 484 (680)
++ .|++..+.++|+.||| .|+|..
T Consensus 168 ad---aEvi~l~~~~l~~lGl~~~~i~i 192 (467)
T 4e51_A 168 AD---AEIVMMCQRLWEDLGLTGIKLEI 192 (467)
T ss_dssp HH---HHHHHHHHHHHHHHTCCCEEEEE
T ss_pred HH---HHHHHHHHHHHHHcCCCceEEEE
Confidence 33 6899999999999999 576643
No 31
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A
Probab=98.85 E-value=6.1e-09 Score=120.52 Aligned_cols=219 Identities=8% Similarity=-0.030 Sum_probs=155.9
Q ss_pred ChhhhhhcCCccccc----C--cceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCc
Q psy10095 286 NKIDMDALSKYVQYT----N--RLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDN 359 (680)
Q Consensus 286 ~H~elg~~l~l~D~~----~--srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~ 359 (680)
.-.+|+.+.|++.-. | +++|.+.-.|+.+-+.|.++.-+.+....||.+|.+|.|...++.+.+|..-.|.+.+
T Consensus 69 ~~~~l~~r~gf~~~~~eiy~g~~G~~d~lP~G~~l~~~Ie~~~r~~~~~~~g~~EV~tP~l~~~~lwk~SGH~~~f~d~m 148 (693)
T 2zt5_A 69 KMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFM 148 (693)
T ss_dssp HHHHHHHHTTSEEETTGGGTCCTTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECCCCSEEEHHHHHHHTHHHHCEEEE
T ss_pred HHHHHHHhCCCcccchhhcCCCCCeEEECCChHHHHHHHHHHHHHHHHHhcCcEEEEeCCcccHHHHhhcCCcccccccc
Confidence 456788888877543 2 7899999999999999999988766434599999999999999999999877777655
Q ss_pred eEeecCCCcccc----------------------------------------------------cc--------------
Q psy10095 360 MVLVNNENDLSE----------------------------------------------------IG-------------- 373 (680)
Q Consensus 360 ~~i~~~~~~~~~----------------------------------------------------~~-------------- 373 (680)
+.... ..+++. |.
T Consensus 149 ~~~~~-~~e~yr~D~l~e~~~~~~~~~~~~~~~~~~e~~~~~~~l~~~~~eel~~li~~~~~~~P~~g~~~~~~~~fnlm 227 (693)
T 2zt5_A 149 VKDVK-NGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLM 227 (693)
T ss_dssp EEBSS-SCCEEEHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHTTTTTCCHHHHHHHHHHTTCBCSSSCCBBCCCEEEECC
T ss_pred eeecc-CCceeeccHhHHHHHHHhhccccccHHHHHHHHHHHhhccCCCHHHHHHHHHHcCCCCCCCCCCCCCcchhhee
Confidence 54321 111110 00
Q ss_pred -------ccCCCceeeccchhhhhhhhhccccc-CCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccce
Q psy10095 374 -------YEERRNHLVGSAHMSMFCAYHTNHSV-NVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREK 445 (680)
Q Consensus 374 -------~~~~~l~LigTaeevpl~~~~~~e~l-~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~K 445 (680)
.++...||=|-+. +++.-.|.+-.. ...+||+++.-+|++||-|. + --.||+|+.||+.
T Consensus 228 f~t~igp~~~~~~~LRPEta-qg~f~~f~r~~~~~~~~LP~~~aqiG~~fRnEi---------s---Pr~GLlR~REF~q 294 (693)
T 2zt5_A 228 FKTFIGPGGNMPGYLRPETA-QGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEI---------S---PRSGLIRVREFTM 294 (693)
T ss_dssp CEEECSSSSSSEEEECSCSH-HHHHTTHHHHHHHTTTCSCEEEEEEEEEECCCS---------S---CCSGGGSCSEEEE
T ss_pred eeccccCCCCcceeeccccc-hHHHHHHHHHHHHhCcCCCEEEEeecceecCCC---------C---CCCCCccceeeEE
Confidence 0112233433221 222211211111 24699999999999999983 2 4689999999999
Q ss_pred EEEEEecCChhHHH------------------------------------------HHHHHHHHHHHHHHHHcCCc---e
Q psy10095 446 VNLFVGTNNHENLC------------------------------------------KEFQNIQSLLKSVMDKLNMK---Y 480 (680)
Q Consensus 446 VE~f~~~~~pe~S~------------------------------------------~~~eeml~~~e~il~~L~Lp---y 480 (680)
-|+-.|| +|++.. +++..++....+||..||++ +
T Consensus 295 ~d~e~F~-~p~~~~~~~y~~v~da~~~~~~~~~~~~~~~~~~~~~~ea~~~g~i~~e~~~~~i~~~~~f~~~lGi~~~~~ 373 (693)
T 2zt5_A 295 AEIEHFV-DPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISPDKL 373 (693)
T ss_dssp EEEEEEE-CTTCCCCTTGGGTTTCEEEEECHHHHHTTCCCEEEEHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred ccceEEe-CcchhcchhHHHHHHHHHhhhhhhhhccccccccchhhhhhhhcccchHHHHHHHHHHHHHHHHcCcCccEE
Confidence 9999999 676642 56788999999999999997 6
Q ss_pred EEeecCCCCCCcccccceeeeeeecCCCceeeeeecCcchh
Q psy10095 481 RICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLNAKVY 521 (680)
Q Consensus 481 RVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn~~~ 521 (680)
|+..-..+++-..+...+|+|+.+|- .|.|+.-|.+-+.
T Consensus 374 ~~~~~~~~e~a~ya~~~~d~e~~~~~--g~~e~~~~a~r~~ 412 (693)
T 2zt5_A 374 RFRQHMENEMAHYACDCWDAESKTSY--GWIEIVGCADRSC 412 (693)
T ss_dssp EEEECCGGGSCTTCSSEEEEEEEETT--EEEEEEEEECCCS
T ss_pred EEeccCchhhccchhhhhhehhhccC--ChHHHHHHHHHHH
Confidence 66655566777778889999999964 4888877665443
No 32
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A
Probab=98.53 E-value=4.7e-07 Score=97.99 Aligned_cols=154 Identities=12% Similarity=0.113 Sum_probs=115.8
Q ss_pred CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhh-cCC-CCCCCCceEeecCCCccccccccCCC
Q psy10095 301 NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGY-GDH-YLSPHDNMVLVNNENDLSEIGYEERR 378 (680)
Q Consensus 301 ~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~-G~~-p~~~~~~~~i~~~~~~~~~~~~~~~~ 378 (680)
.++++.+...++++-+.|.+...+.+ .++||.+|.+|.|-..+++... |.. -....++|.+.+ .++..
T Consensus 6 ~~G~~d~lP~~~~~~~~i~~~i~~~~-~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~~D---------~~g~~ 75 (421)
T 1h4v_B 6 VRGTKDLFGKELRMHQRIVATARKVL-EAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQD---------RGGRS 75 (421)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHHH-HHcCCEEecccccccHHHhhhccCCcccccccceEEEEC---------CCCCE
Confidence 35678888999999999999999766 5689999999999999999887 642 223346677653 12356
Q ss_pred ceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHH
Q psy10095 379 NHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENL 458 (680)
Q Consensus 379 l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S 458 (680)
+.|=|... .|++-++........+||+|+.-++++||.|. . ..| |..||...-.-.|+.+...+
T Consensus 76 l~Lrpd~t-~~~ar~~~~~~~~~~~lP~rl~~~g~vfR~e~--------p-----~~g--R~REf~Q~g~e~~g~~~~~a 139 (421)
T 1h4v_B 76 LTLRPEGT-AAMVRAYLEHGMKVWPQPVRLWMAGPMFRAER--------P-----QKG--RYRQFHQVNYEALGSENPIL 139 (421)
T ss_pred EeeCCcch-HHHHHHHHhccccccCCCeEEEEecCeecCCC--------C-----CCC--CcccEEEccEEEECCCChhh
Confidence 78888665 78888887665666789999999999998862 1 133 88899887666666223333
Q ss_pred HHHHHHHHHHHHHHHHHcCCc-eEEe
Q psy10095 459 CKEFQNIQSLLKSVMDKLNMK-YRIC 483 (680)
Q Consensus 459 ~~~~eeml~~~e~il~~L~Lp-yRVv 483 (680)
+ .|++..+.++|+.|||+ |+|.
T Consensus 140 d---~e~i~~~~~~l~~lgl~~~~i~ 162 (421)
T 1h4v_B 140 D---AEAVVLLYECLKELGLRRLKVK 162 (421)
T ss_pred h---HHHHHHHHHHHHHcCCCceEEE
Confidence 3 37889999999999998 7775
No 33
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=98.47 E-value=7.9e-07 Score=96.93 Aligned_cols=154 Identities=13% Similarity=0.096 Sum_probs=115.7
Q ss_pred CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHh-hcCCCCCCCCceEeecCCCccccccccCCCc
Q psy10095 301 NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEG-YGDHYLSPHDNMVLVNNENDLSEIGYEERRN 379 (680)
Q Consensus 301 ~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g-~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l 379 (680)
.++++.+...++.+-+.|.+...+.+ .++||.+|.+|.|-..+++.. .|. ....++|.+.+ .++..+
T Consensus 9 ~~G~~d~lP~~~~~~~~i~~~i~~~~-~~~G~~ei~tP~le~~el~~~~~G~--~~~~em~~~~D---------~~g~~l 76 (434)
T 1wu7_A 9 IRGFRDFYPEDMDVEKFIFKTAEEAA-EAFGFRRIDFPSLEYLDLYRIKSGE--ELLQQTYSFVD---------KGGREV 76 (434)
T ss_dssp CTTCCCBCHHHHHHHHHHHHHHHHHH-HHTTCEECBCCSEEETHHHHTTSCT--TGGGGSCEEEC---------TTSCEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHHH-HHcCCEEeeccccccHHHhhhccCC--ccccceEEEEC---------CCCCEE
Confidence 45788889999999999999999766 568999999999999999988 575 33456777763 123568
Q ss_pred eeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHH
Q psy10095 380 HLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLC 459 (680)
Q Consensus 380 ~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~ 459 (680)
.|=|+.. .|++-++... ...+||+|+.-+|++||.|. . ..| |..||...-.-.|+.+...++
T Consensus 77 ~LrPd~t-~~~aR~~~~~--~~~~lP~rl~~~g~vfR~er--------p-----~~g--R~REF~Q~d~ei~g~~~~~ad 138 (434)
T 1wu7_A 77 TLIPEAT-PSTVRMVTSR--KDLQRPLRWYSFPKVWRYEE--------P-----QAG--RYREHYQFNADIFGSDSPEAD 138 (434)
T ss_dssp EECSCSH-HHHHHHHTTC--TTCCSSEEEEECCEEECCCC--------S-----CSS--CCSEEEEEEEEEESCCSHHHH
T ss_pred EeCCCCh-HHHHHHHHhc--CCCCCCeEEEEEcCeecCCC--------C-----CCC--CccceEEeeEEEEcCCChHhh
Confidence 8888775 7888888765 22379999999998888862 1 134 888998876666663233332
Q ss_pred HHHHHHHHHHHHHHHHcCCc--eEEeecCC
Q psy10095 460 KEFQNIQSLLKSVMDKLNMK--YRICKAPA 487 (680)
Q Consensus 460 ~~~eeml~~~e~il~~L~Lp--yRVv~m~t 487 (680)
+ |++..+.++|+.|||+ |++..--.
T Consensus 139 ~---E~i~~~~~~l~~lgl~~~~~i~l~~~ 165 (434)
T 1wu7_A 139 A---EVIALASSILDRLGLQDIYEIRINSR 165 (434)
T ss_dssp H---HHHHHHHHHHHHTTTTTSEEEEEEEH
T ss_pred H---HHHHHHHHHHHHcCCCCceEEEECCh
Confidence 2 6789999999999998 88764433
No 34
>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A*
Probab=98.45 E-value=1.8e-06 Score=92.12 Aligned_cols=151 Identities=11% Similarity=0.067 Sum_probs=109.5
Q ss_pred CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhh--cCCCCCCCCceEeecCCCccccccccCCC
Q psy10095 301 NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGY--GDHYLSPHDNMVLVNNENDLSEIGYEERR 378 (680)
Q Consensus 301 ~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~--G~~p~~~~~~~~i~~~~~~~~~~~~~~~~ 378 (680)
.++++.+...++.+-+.|.+.+.+.+ .++||.+|.+|.|-..+++..+ |.-....+++|.+.+. ++..
T Consensus 25 ~~G~~d~lP~~~~~~~~i~~~i~~~~-~~~Gy~eI~tP~le~~el~~~s~~g~~~~~~~~my~~~D~---------~g~~ 94 (344)
T 1z7m_A 25 PEESAEMTLNQVKSLRQIEGRLRKLF-SLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKH---------EGQS 94 (344)
T ss_dssp CTTCCCCCHHHHHHHHHHHHHHHHHH-HHTTCEECCCCSEEEHHHHHHHHCSSSCCCTTSCCEEECT---------TCCE
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHH-HHcCCEEecCcccCcHHHHhhccCCccccccccEEEEECC---------CCCE
Confidence 35678888999999999999999766 5689999999999999999864 4323334567777531 2345
Q ss_pred ceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHH
Q psy10095 379 NHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENL 458 (680)
Q Consensus 379 l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S 458 (680)
+.|=|-.. +|++-++... ...+|+|++-+|++||.|. . ..| |..||..+..-.|+.+...+
T Consensus 95 l~LRpd~T-~~~aR~~~~~---~~~~P~rl~y~g~vfR~e~--------p-----~~g--R~REF~Q~g~ei~g~~~~~a 155 (344)
T 1z7m_A 95 ITLRYDFT-LPLVRLYSQI---KDSTSARYSYFGKIFRKEK--------R-----HKG--RSTENYQIGIELFGESADKS 155 (344)
T ss_dssp EEECCCSH-HHHHHHHHTC---CSCCCEEEEEEEECCCCCC----------------------CCEEEEEEEESSCHHHH
T ss_pred EecCCCCc-HHHHHHHHhc---CCCCCeEEEEECcEEccCC--------C-----CCC--CcceeEEEEEEEEcCCCcHH
Confidence 77877554 6778777665 4579999999999999862 1 133 88899998888887333333
Q ss_pred HHHHHHHHHHHHHHHHHcCCc-eEEe
Q psy10095 459 CKEFQNIQSLLKSVMDKLNMK-YRIC 483 (680)
Q Consensus 459 ~~~~eeml~~~e~il~~L~Lp-yRVv 483 (680)
+ -|++..+.++|+.|||+ |+|.
T Consensus 156 D---aEvi~l~~~~l~~lgl~~~~i~ 178 (344)
T 1z7m_A 156 E---LEILSLALQVIEQLGLNKTVFE 178 (344)
T ss_dssp H---HHHHHHHHHHHHHHTCSSEEEE
T ss_pred H---HHHHHHHHHHHHHCCCCcEEEE
Confidence 3 38999999999999997 7654
No 35
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A*
Probab=98.30 E-value=1.6e-06 Score=93.87 Aligned_cols=154 Identities=9% Similarity=-0.007 Sum_probs=113.4
Q ss_pred CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhh-cCCC-CCCCCceEeecCCCccccccccCCC
Q psy10095 301 NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGY-GDHY-LSPHDNMVLVNNENDLSEIGYEERR 378 (680)
Q Consensus 301 ~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~-G~~p-~~~~~~~~i~~~~~~~~~~~~~~~~ 378 (680)
.++++.+...++++-+.|.+...+.+ .++||.+|.+|.|-..+++... |..- ....++|.+.+ .++..
T Consensus 7 ~~G~~d~lP~~~~~~~~i~~~i~~~~-~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~~D---------~~g~~ 76 (423)
T 1htt_A 7 IRGMNDYLPGETAIWQRIEGTLKNVL-GSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFED---------RNGDS 76 (423)
T ss_dssp CTTCCCBCHHHHHHHHHHHHHHHHHH-HTTTCEECBCCSEEEHHHHHHHHCSSSHHHHHTCEEEEC---------TTSCE
T ss_pred CCCccccCHHHHHHHHHHHHHHHHHH-HHcCCEEecccccCHHHHHhhccCCchhhhhhheEEEEc---------CCCCE
Confidence 35678888999999999999998765 5689999999999999999887 6311 11235677763 12356
Q ss_pred ceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHH
Q psy10095 379 NHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENL 458 (680)
Q Consensus 379 l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S 458 (680)
+.|=|... .|++-++...-. ..+||+|+.-++++||.|. . ..| |..||...-.-.|+.+...+
T Consensus 77 l~Lrpd~t-~~~aR~~~~~~~-~~~~P~rl~~~g~vfR~e~--------p-----~~g--R~Ref~Q~d~e~~g~~~~~a 139 (423)
T 1htt_A 77 LTLRPEGT-AGCVRAGIEHGL-LYNQEQRLWYIGPMFRHER--------P-----QKG--RYRQFHQLGCEVFGLQGPDI 139 (423)
T ss_dssp EEECSCSH-HHHHHHHHHHTC-STTCCEEEEEEEEEECCCC--------C-----CSS--CCSEEEEEEEEEESCCSHHH
T ss_pred EEeCCCch-HHHHHHHHhccc-ccCCCeEEEEEcCEecCCC--------C-----CCC--ccceeEEeeEEEECCCCchh
Confidence 78888665 788887764422 3579999999999998862 1 134 88899887777777333333
Q ss_pred HHHHHHHHHHHHHHHHHcCC--ceEEee
Q psy10095 459 CKEFQNIQSLLKSVMDKLNM--KYRICK 484 (680)
Q Consensus 459 ~~~~eeml~~~e~il~~L~L--pyRVv~ 484 (680)
++ |++..+.++|+.||| .|+++.
T Consensus 140 d~---e~i~~~~~~l~~lgl~~~~~i~i 164 (423)
T 1htt_A 140 DA---ELIMLTARWWRALGISEHVTLEL 164 (423)
T ss_dssp HH---HHHHHHHHHHHHHTCGGGCEEEE
T ss_pred hH---HHHHHHHHHHHHCCCCCCcEEEE
Confidence 33 678999999999999 588764
No 36
>3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=98.19 E-value=5.2e-06 Score=89.52 Aligned_cols=158 Identities=10% Similarity=0.020 Sum_probs=108.7
Q ss_pred CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCC-CCceEeecCCCccccccccCCCc
Q psy10095 301 NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSP-HDNMVLVNNENDLSEIGYEERRN 379 (680)
Q Consensus 301 ~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~-~~~~~i~~~~~~~~~~~~~~~~l 379 (680)
.++++.+...++.+.+.|.+.+.+.+ .++||.+|.||.|-..+++...|.. .. .++|.+.+ .++..+
T Consensus 26 p~G~~d~lP~~~~~~~~i~~~i~~~f-~~~Gy~eI~tP~le~~el~~~~g~~--~~~~~my~~~D---------~~g~~l 93 (373)
T 3rac_A 26 PPGMQDGYPDFAKRRRAVETRLLSFV-EDAGYEPVTSGLFEYVDTLLRARSP--ESSRDWIRLFD---------GGGDAV 93 (373)
T ss_dssp CTTCCCCCTTHHHHHHHHHHHHHHHH-HHTTCEECCCCSEEEHHHHHTTSCT--TSCCCCCBCCC---------CSSSCE
T ss_pred CCCccccCHHHHHHHHHHHHHHHHHH-HHcCCeEEECCceeeHHHHhhcCCc--cchhceEEEEC---------CCCCEE
Confidence 35678888999999999999999766 5689999999999999999988732 22 45666653 123467
Q ss_pred eeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHH
Q psy10095 380 HLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLC 459 (680)
Q Consensus 380 ~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~ 459 (680)
.|=|... +|++-++... +....+|+|++-+|++||.|. .|+ +. .-+.-|..||..+-.=.|+ .++...
T Consensus 94 ~LRpd~T-~~~aR~~~~~-~~~~~~P~r~~y~g~vfR~e~-------~g~-~~-~~~~gR~ReF~Q~g~ei~g-~~d~~~ 161 (373)
T 3rac_A 94 ALRPEMT-PSIARMAAPR-VAAGRTPIRWCYCERVYRRTD-------DPA-SL-SWASGKAAESTQVGIERIG-EEASVD 161 (373)
T ss_dssp EECSSSH-HHHHHHHHHH-HHTTCCCCEEEEEEEEEECC---------------------CEEEEEEEEEECS-SCCCHH
T ss_pred EECCcCH-HHHHHHHHhc-cccCCCCeEEEEEcceEccCC-------Ccc-cc-cccCCccceeEEeeeEEEC-CCCCHH
Confidence 7877554 6777665543 334789999999999998862 110 00 0033388899987777777 332222
Q ss_pred HHHHHHHHHHHHHHHHcCC-ceEEe
Q psy10095 460 KEFQNIQSLLKSVMDKLNM-KYRIC 483 (680)
Q Consensus 460 ~~~eeml~~~e~il~~L~L-pyRVv 483 (680)
+. -|++..+.++|+.||| .|+|.
T Consensus 162 aD-aEvi~l~~~~l~~lgl~~~~i~ 185 (373)
T 3rac_A 162 VD-MDVLRLLHEASAAAGVRHHRIV 185 (373)
T ss_dssp HH-HHHHHHHHHHHHHHTCCSCEEE
T ss_pred HH-HHHHHHHHHHHHHcCCCceEEE
Confidence 22 3799999999999999 46554
No 37
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A*
Probab=98.17 E-value=6.6e-06 Score=85.48 Aligned_cols=131 Identities=12% Similarity=0.139 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCC--CCceEeecCCCccccccccCCCceeeccchhhhhhhhh
Q psy10095 317 LIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSP--HDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYH 394 (680)
Q Consensus 317 ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~--~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~ 394 (680)
.+++...+.+ ...||++|.+|.|+........|.....+ .++|++. +..+|-+|.+ .+|....
T Consensus 81 ~i~~~ir~~l-~~~Gf~EV~Tp~l~~~~~~~~~~~~~~~p~~~~~~~~~-------------~~~~LR~sls-p~L~~~l 145 (290)
T 3qtc_A 81 KLEREITRFF-VDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRVD-------------KNFCLRPMLT-PNLYNYL 145 (290)
T ss_dssp HHHHHHHHHH-HHTTCEEECCCSEEETHHHHHTTCCTTSSGGGGCCEET-------------TTEEECSCSH-HHHHHHH
T ss_pred HHHHHHHHHH-HHCCCEEEECCceeeHHHHHhcCCCcCCchhhhheeeC-------------CCeeEcccCh-HHHHHHH
Confidence 3344444333 34799999999999999888776433211 1233331 2467776654 4454322
Q ss_pred cccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHH
Q psy10095 395 TNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMD 474 (680)
Q Consensus 395 ~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~ 474 (680)
. ..+....+|+|++.+|+|||.|. .. .-|.+||+++++..+- ... .|.++...++++++
T Consensus 146 ~-~n~~~~~~p~rlfeiG~vFR~E~--------~~-------~~~~~Ef~ql~~~~~g-~~~----~f~elkg~le~ll~ 204 (290)
T 3qtc_A 146 R-KLDRALPDPIKIFEIGPCYRKES--------DG-------KEHLEEFTMLVFWQMG-SGC----TRENLESIITDFLN 204 (290)
T ss_dssp H-HHTTTSCSSEEEEEEEEEECCCS--------CS-------SSCCSEEEEEEEEEES-TTC----CHHHHHHHHHHHHH
T ss_pred H-HhhccCCCCeEEEEEcCEEecCC--------CC-------CcCcchheEEEEEEEc-CCh----HHHHHHHHHHHHHH
Confidence 2 12344678999999999999862 21 1267899999988876 221 37789999999999
Q ss_pred HcCCceEEe
Q psy10095 475 KLNMKYRIC 483 (680)
Q Consensus 475 ~L~LpyRVv 483 (680)
.||++|++.
T Consensus 205 ~lGl~~~~~ 213 (290)
T 3qtc_A 205 HLGIDFKIV 213 (290)
T ss_dssp HHTCCCEEE
T ss_pred HcCCCcEEe
Confidence 999999875
No 38
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=98.11 E-value=9.5e-06 Score=88.24 Aligned_cols=151 Identities=7% Similarity=0.020 Sum_probs=107.9
Q ss_pred CcceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCce
Q psy10095 301 NRLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNH 380 (680)
Q Consensus 301 ~srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~ 380 (680)
..+++.+...++.+-+.|.+.+.+.+ .++||.+|.||.|-..+++...|. ....++|.+.+. ++..+.
T Consensus 13 p~G~~d~lP~~~~~~~~i~~~l~~~~-~~~Gy~eI~tP~lE~~el~~~~g~--~~~~~my~f~D~---------~g~~l~ 80 (400)
T 3od1_A 13 PFGMRDTLPEWYKTKKNICDQMTEEI-NLWGYDMIETPTLEYYETVGVVSA--ILDQQLFKLLDQ---------QGNTLV 80 (400)
T ss_dssp CTTCCCBCHHHHHHHHHHHHHHHHHH-HHTTCEECBCCSEEETTTHHHHSS--SCGGGSCEEECT---------TSCEEE
T ss_pred CCcchhcCHHHHHHHHHHHHHHHHHH-HHcCCEEEeCCccccHHHHhhcCC--ccccceEEEECC---------CCCEEE
Confidence 35677788899999999999999766 568999999999999999988772 234456777631 234577
Q ss_pred eeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHH
Q psy10095 381 LVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCK 460 (680)
Q Consensus 381 LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~ 460 (680)
|=|-.. +|++-++... +....+|+|++-+|++||.|. .+.-|..||..+-.=.|+.....++
T Consensus 81 LRpd~T-~~~aR~~~~~-~~~~~~P~r~~y~g~vfR~e~---------------~~~gR~Ref~Q~g~ei~G~~~~~aD- 142 (400)
T 3od1_A 81 LRPDMT-APIARLVASS-LKDRAYPLRLAYQSNVYRAQQ---------------NEGGKPAEFEQLGVELIGDGTASAD- 142 (400)
T ss_dssp ECSCSH-HHHHHHHHHH-CSSSCSCEEEEEEEEEECCCC------------------CCCSEEEEEEEEEESCCSHHHH-
T ss_pred ECCCCH-HHHHHHHHhh-cccCCCCeEEEEEcCEEeCCC---------------CCCCCCCccEEeEEEEECCCChHhH-
Confidence 776554 6777665543 445789999999999999862 1233788998854444452222333
Q ss_pred HHHHHHHHHHHHHHHcCC-ceEEe
Q psy10095 461 EFQNIQSLLKSVMDKLNM-KYRIC 483 (680)
Q Consensus 461 ~~eeml~~~e~il~~L~L-pyRVv 483 (680)
-|++..+.++|+.||| .|+|.
T Consensus 143 --aEvi~l~~~~l~~lgl~~~~i~ 164 (400)
T 3od1_A 143 --GEVIALMIAALKRAGLSEFKVA 164 (400)
T ss_dssp --HHHHHHHHHHHHHTTCCSEEEE
T ss_pred --HHHHHHHHHHHHHCCCCceEEE
Confidence 3799999999999999 46654
No 39
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=97.91 E-value=2.3e-05 Score=86.65 Aligned_cols=156 Identities=9% Similarity=0.037 Sum_probs=107.4
Q ss_pred cccccC-cceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHh-hcCCCCCCCCceEeecCCCcccccc
Q psy10095 296 YVQYTN-RLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEG-YGDHYLSPHDNMVLVNNENDLSEIG 373 (680)
Q Consensus 296 l~D~~~-srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g-~G~~p~~~~~~~~i~~~~~~~~~~~ 373 (680)
++.+.. .+++.+...++.+-+.|.+.+.+.+ .++||.+|.||.|-..+++.. .|.. ...++|.+.+.
T Consensus 26 m~~~~~p~G~~d~lP~~~~~~~~i~~~i~~~~-~~~Gy~eI~tP~lE~~el~~~~~G~~--~~~~my~f~D~-------- 94 (456)
T 3lc0_A 26 MVETEPVQGCRDFPPEAMRCRRHLFDVFHATA-KTFGFEEYDAPVLESEELYIRKAGEE--ITEQMFNFITK-------- 94 (456)
T ss_dssp CCCCSCSTTCCCCCHHHHHHHHHHHHHHHHHH-HHTTCEECCCCSEEEGGGGCCCSCCH--HHHTCEEEECS--------
T ss_pred cccccCCCCCcccCHhHHHHHHHHHHHHHHHH-HHCCCEEEECCcEeehhhhccccccc--hhhceEEEEcC--------
Confidence 344442 4677788899999999999999766 568999999999999999875 3632 13456776531
Q ss_pred ccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecC
Q psy10095 374 YEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTN 453 (680)
Q Consensus 374 ~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~ 453 (680)
++..+.|=|-.. +|++-++.... ...++|+|++-+|+|||.|. .. .| |..||..+-.=.|+.
T Consensus 95 -~g~~l~LRpd~T-~~~aR~~~~~~-~~~~~P~r~~y~g~vfR~e~--------~~-----~g--R~ReF~Q~g~ei~G~ 156 (456)
T 3lc0_A 95 -GGHRVALRPEMT-PSLARLLLGKG-RSLLLPAKWYSIPQCWRYEA--------IT-----RG--RRREHYQWNMDIVGV 156 (456)
T ss_dssp -SSCEEEECSCSH-HHHHHHHHHSC-TTCCSSEEEEECCEEECCCC--------------------CCEEEEEEEEEESC
T ss_pred -CCCEEecCCcCH-HHHHHHHHhcC-cccCCCEEEEEeccEEecCC--------CC-----CC--CccceEEEEEEEEcC
Confidence 234577776554 67777666553 34678999999998888862 11 23 788998855444442
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHcCC---ceEEe
Q psy10095 454 NHENLCKEFQNIQSLLKSVMDKLNM---KYRIC 483 (680)
Q Consensus 454 ~pe~S~~~~eeml~~~e~il~~L~L---pyRVv 483 (680)
....++ -|++..+.++|+.||| .|+|.
T Consensus 157 ~~~~~D---aEvi~l~~~~l~~lgl~~~~~~i~ 186 (456)
T 3lc0_A 157 KSVSAE---VELVCAACWAMRSLGLSSKDVGIK 186 (456)
T ss_dssp CSTHHH---HHHHHHHHHHHHHTTCCTTTEEEE
T ss_pred CChHhh---HHHHHHHHHHHHHcCCCCCceEEE
Confidence 222333 2799999999999999 46554
No 40
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=97.89 E-value=4.4e-05 Score=84.31 Aligned_cols=168 Identities=10% Similarity=0.114 Sum_probs=106.2
Q ss_pred hhcCCcccccC-cceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecC---C
Q psy10095 291 DALSKYVQYTN-RLDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNN---E 366 (680)
Q Consensus 291 g~~l~l~D~~~-srfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~---~ 366 (680)
+.+.+.+.+.. .++.-+....+.+.+.|.+.+.+.+ .++||.+|.||.|-..+++.+.| ..+.+++|.+.+. +
T Consensus 4 ~~~~~~~~~~~p~G~~D~lP~~~~~~~~i~~~l~~~~-~~~Gy~~i~tP~~E~~~~~~~~G--~~~ke~m~~~~d~~~~g 80 (465)
T 3net_A 4 MAKNDKINFSTPSGFPEFLPSEKRLELYLLDTIRRVY-ESYGFTPIETPAVERLEVLQAKG--NQGDNIIYGLEPILPPN 80 (465)
T ss_dssp -----CCCCSCCTTCCCCCHHHHHHHHHHHHHHHHHH-HHTTCEECCCCSEEEHHHHHGGG--CC--CBEEEEEEEC---
T ss_pred ccCCccccccCCCCccccCHHHHHHHHHHHHHHHHHH-HHcCCEEeeccccccHHHHhccC--CCCccceEEEecccccc
Confidence 34456666665 3556677888888999999888765 56899999999999999998877 2232227877642 1
Q ss_pred Cccccc---cccCCCceeeccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhcc
Q psy10095 367 NDLSEI---GYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQR 443 (680)
Q Consensus 367 ~~~~~~---~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF 443 (680)
+..... ..++..+.|=|-.. +|++=++.... ....+|+|++-+|++||.|. .. .| |..||
T Consensus 81 ~~~~~~~~~~~~g~~l~LRpd~T-~~~aR~~~~~~-~~~~~p~r~~y~g~vfR~e~--------~~-----~g--r~Ref 143 (465)
T 3net_A 81 RQAEKDKSGDTGSEARALKFDQT-VPLAAYIARHL-NDLTFPFARYQMDVVFRGER--------AK-----DG--RFRQF 143 (465)
T ss_dssp -------------CCEEECSCSH-HHHHHHHHHHG-GGSCSSEEEEECCEEECBC---------------------CCEE
T ss_pred cccccccccCCCCCEEEeCCCCh-HHHHHHHHhcc-cccCCCeEEEEeccEEecCC--------CC-----CC--Cccee
Confidence 000000 00135678877554 67876665543 24568999999998888862 11 33 66788
Q ss_pred ceE--EEEEecCChhHH--HHHHHHHHHHHHHHHHHcCCc-eEEe
Q psy10095 444 EKV--NLFVGTNNHENL--CKEFQNIQSLLKSVMDKLNMK-YRIC 483 (680)
Q Consensus 444 ~KV--E~f~~~~~pe~S--~~~~eeml~~~e~il~~L~Lp-yRVv 483 (680)
..+ |+|+.. ++ .+ ++ |++..+.++|+.|||. |+|.
T Consensus 144 ~Q~g~ei~G~~-~~-~a~~Da---Evi~l~~~~l~~lgl~~~~i~ 183 (465)
T 3net_A 144 RQCDIDVVGRE-KL-SLLYDA---QMPAIITEIFEAVNIGDFVIR 183 (465)
T ss_dssp EEEEEEEECSS-CC-CHHHHH---HHHHHHHHHHHHHTCSCEEEE
T ss_pred EEeeEEEECCC-Cc-cchhhH---HHHHHHHHHHHHcCCCceEEE
Confidence 875 555433 22 23 22 8999999999999995 5543
No 41
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=97.45 E-value=0.00046 Score=75.33 Aligned_cols=149 Identities=10% Similarity=-0.050 Sum_probs=96.5
Q ss_pred ceEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceee
Q psy10095 303 LDIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLV 382 (680)
Q Consensus 303 rfyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~Li 382 (680)
+++-+...++.+-+.|.+.+.+.+ .++||.+|.||.|-..+++.+..- ...+.+|.+.+ .++..+.|=
T Consensus 19 G~~D~lP~~~~~~~~i~~~~~~~~-~~~Gy~eI~tP~le~~el~~~~~g--~~~~~~y~f~D---------~~g~~l~LR 86 (464)
T 4g84_A 19 GTRDYSPRQMAVREKVFDVIIRCF-KRHGAEVIDTPVFELKETLMGKYG--EDSKLIYDLKD---------QGGELLSLR 86 (464)
T ss_dssp TCCCBCHHHHHHHHHHHHHHHHHH-HHTTCEECBCCSEEEHHHHTTSCC------CCCBBCC---------CSSCCEEEC
T ss_pred CcCccCHHHHHHHHHHHHHHHHHH-HHCCCeEEECcccCcHHHhccccC--cCcceeEEEEC---------CCCCEEEeC
Confidence 566677899999999999999766 568999999999999998865321 12344565542 124457776
Q ss_pred ccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccce--EEEEEecCChhHHHH
Q psy10095 383 GSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREK--VNLFVGTNNHENLCK 460 (680)
Q Consensus 383 gTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~K--VE~f~~~~~pe~S~~ 460 (680)
|=.. .|++=++.. ...+|+|+.-+|++||.|. -. .|..|..||.. +|+|+.. ++..++.
T Consensus 87 Pd~T-~~~aR~~~~----~~~~p~k~~y~g~vfR~er--------p~-----~~~gR~Ref~Q~g~ei~G~~-~~~~aDa 147 (464)
T 4g84_A 87 YDLT-VPFARYLAM----NKLTNIKRYHIAKVYRRDN--------PA-----MTRGRYREFYQCDFDIAGNF-DPMIPDA 147 (464)
T ss_dssp SCSH-HHHHHHHHH----TTCSCEEEEEEEEEECCCC-------------------CCSEEEEEEEEEESCC-STTHHHH
T ss_pred CcCc-HHHHHHHHh----cCCCCceeEEEecceeccC--------Cc-----cccCccceeeecceeccCCc-cchhhHH
Confidence 5221 455544432 2457999999999998861 11 23346666655 5666543 4544443
Q ss_pred HHHHHHHHHHHHHHHcCCceEEeec
Q psy10095 461 EFQNIQSLLKSVMDKLNMKYRICKA 485 (680)
Q Consensus 461 ~~eeml~~~e~il~~L~LpyRVv~m 485 (680)
|++..+.++|+.|||.--++.+
T Consensus 148 ---Evi~l~~~~l~~lgl~~~~i~i 169 (464)
T 4g84_A 148 ---ECLKIMCEILSSLQIGDFLVKV 169 (464)
T ss_dssp ---HHHHHHHHHHHHHTCCCEEEEE
T ss_pred ---HHHHHHHHHHHHhCCCCcceee
Confidence 6888999999999996444444
No 42
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=97.42 E-value=4e-05 Score=70.74 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=35.2
Q ss_pred CCCceeecccccccccChHHHHHhhccchhhhhhhhcc
Q psy10095 52 PGEAQFYCLHCARHFIDEHALKEHFRTKVHKRRLKALE 89 (680)
Q Consensus 52 pG~gq~yC~~C~r~F~~~~~l~~H~k~K~HKrr~K~l~ 89 (680)
.+.+.|||..|+++|.+...+..|..||.|++||++++
T Consensus 89 ~~~~~~~C~~C~~~f~s~~~~~~H~~gk~H~~~~~~~~ 126 (127)
T 1zu1_A 89 GEDRSKCCPVCNMTFSSPVVAESHYIGKTHIKNLRLRE 126 (127)
T ss_dssp CCCTTTEETTTTEECSSHHHHHHHHTSHHHHHHHHHHH
T ss_pred CCCCCeEcCCCCCEeCCHHHHHHHHCCHHHHHHHHHhc
Confidence 36789999999999999999999999999999999863
No 43
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=97.09 E-value=0.0014 Score=72.95 Aligned_cols=148 Identities=10% Similarity=-0.026 Sum_probs=93.0
Q ss_pred eEEEeCchHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeec
Q psy10095 304 DIHYLGNAAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVG 383 (680)
Q Consensus 304 fyyL~G~gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~Lig 383 (680)
+.=+...++.+-+.|.+.+.+.+ .++||.+|.||.|-..+++.+..- ...+.+|.+.+ .++..+.|=|
T Consensus 73 ~~D~lP~~~~~~~~ie~~i~~~~-~~~Gy~eI~tP~lE~~el~~~~~g--e~~~~my~f~D---------~~g~~l~LRP 140 (517)
T 4g85_A 73 TRDYSPRQMAVREKVFDVIIRCF-KRHGAEVIDTPVFELKETLMGKYG--EDSKLIYDLKD---------QGGELLSLRY 140 (517)
T ss_dssp CCCBCHHHHHHHHHHHHHHHHHH-HHHTCEECBCCSEEEHHHHHCC--------CSCBBCC---------TTSCCEEECS
T ss_pred CCccCHHHHHHHHHHHHHHHHHH-HHCCCeEEECcccCcHHHhhcccC--cCcceeEEEEC---------CCCCEEEeCC
Confidence 33455788999999999999766 568999999999999998865331 12334565542 1234577765
Q ss_pred cchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceE--EEEEecCChhHHHHH
Q psy10095 384 SAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKV--NLFVGTNNHENLCKE 461 (680)
Q Consensus 384 Taeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KV--E~f~~~~~pe~S~~~ 461 (680)
=.. +|++=++.. ...+|+|+.-+|++||.|. . ...+| |..||..+ |+|+.. +|..+++
T Consensus 141 d~T-~~~aR~~~~----~~~~p~k~yyig~vfR~Er--------p---~~~~G--R~ReF~Q~g~ei~G~~-~~~~aDa- 200 (517)
T 4g85_A 141 DLT-VPFARYLAM----NKLTNIKRYHIAKVYRRDN--------P---AMTRG--RYREFYQCDFDIAGNF-DPMIPDA- 200 (517)
T ss_dssp CSH-HHHHHHHHH----TTCSCEEEEEEEEEECCCC--------------------CCEEEEEEEEEESCC-CTTHHHH-
T ss_pred cCc-HHHHHHHHh----CCCCCceeEEEeceEeccC--------c---ccccC--ccceeeeeceeccCCc-cchHHHH-
Confidence 221 456544432 2457999999999998861 1 11234 66677665 555433 4544443
Q ss_pred HHHHHHHHHHHHHHcCCceEEeec
Q psy10095 462 FQNIQSLLKSVMDKLNMKYRICKA 485 (680)
Q Consensus 462 ~eeml~~~e~il~~L~LpyRVv~m 485 (680)
|++..+.++|+.||+.--++.+
T Consensus 201 --Evi~l~~~~l~~lgl~~~~i~i 222 (517)
T 4g85_A 201 --ECLKIMCEILSSLQIGDFLVKV 222 (517)
T ss_dssp --HHHHHHHHHHHHHCCCCEEEEE
T ss_pred --HHHHHHHHHHHhhcCCcccccc
Confidence 6889999999999996444443
No 44
>1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C*
Probab=96.07 E-value=0.0064 Score=62.63 Aligned_cols=110 Identities=10% Similarity=0.061 Sum_probs=70.7
Q ss_pred HHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCC
Q psy10095 324 DYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKD 403 (680)
Q Consensus 324 d~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~ 403 (680)
+.+ .++||.+|.||.|-..+++.. + .| .+. ++..+.|=|=.. +|++ -+ .+....
T Consensus 14 ~~~-~~~Gy~eI~tP~le~~~l~~~--------d-~f-~d~----------~g~~l~LRpd~T-~~~a-~~---~~~~~~ 67 (275)
T 1usy_A 14 SKA-TKKGFSPFFVPALEKAEEPAG--------N-FF-LDR----------KGNLFSIREDFT-KTVL-NH---RKRYSP 67 (275)
T ss_dssp HHH-HHTTCEECCCCSEEECSSCCS--------S-CE-EET----------TSCEEEECCCHH-HHHH-HH---HTTCTT
T ss_pred HHH-HHCCCEEecCccccchhhhcc--------c-cc-CCC----------CCCEEEeCCcCh-HHHH-HH---HhhcCC
Confidence 444 568999999999999988865 1 33 221 133466655322 4555 22 223446
Q ss_pred -CCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceE--EEEEecCChhHHHHHHHHHHHHHHHHHHHcCCc-
Q psy10095 404 -LPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKV--NLFVGTNNHENLCKEFQNIQSLLKSVMDKLNMK- 479 (680)
Q Consensus 404 -LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KV--E~f~~~~~pe~S~~~~eeml~~~e~il~~L~Lp- 479 (680)
+|+|++-+|++||.|. . |+ .||..+ |+|+.. ++ .++ -|++..+.++|+.||+.
T Consensus 68 ~~p~R~~y~g~vfR~e~--------~--~~--------Ref~Q~g~ei~g~~-~~-~~D---aEvi~l~~~~l~~lgl~~ 124 (275)
T 1usy_A 68 DSQIKVWYADFVYRYSG--------S--DL--------VAEYQLGLEKVPRN-SL-DDS---LEVLEIIVESASEFFEGP 124 (275)
T ss_dssp CCCEEEECCEEEEEEET--------T--EE--------EEEEEEEEEEESCC-SH-HHH---HHHHHHHHHHHHHHCCSC
T ss_pred CCceEEEEeceEEecCC--------C--CC--------CeeeEeCEEEecCC-Cc-hhH---HHHHHHHHHHHHHcCCCC
Confidence 9999999888888762 1 11 466664 555533 22 222 68999999999999996
Q ss_pred eEE
Q psy10095 480 YRI 482 (680)
Q Consensus 480 yRV 482 (680)
|+|
T Consensus 125 ~~i 127 (275)
T 1usy_A 125 VIV 127 (275)
T ss_dssp EEE
T ss_pred eEE
Confidence 654
No 45
>1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A*
Probab=96.01 E-value=0.066 Score=57.31 Aligned_cols=173 Identities=10% Similarity=0.132 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCcEeeccCcccchHH-HHhhcCCCCC-----CCCceEeecCCCccc-cccccCCCceeecc
Q psy10095 312 AKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVI-VEGYGDHYLS-----PHDNMVLVNNENDLS-EIGYEERRNHLVGS 384 (680)
Q Consensus 312 A~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v-~~g~G~~p~~-----~~~~~~i~~~~~~~~-~~~~~~~~l~LigT 384 (680)
..+.+.+.+++. ..||+++..|.+..... ++..++ |.+ ..+.|++.+.-+.-. .--....+..+.-|
T Consensus 104 ~~~~~~Ir~~f~-----~~Gf~Ev~~p~v~~~~~nfd~L~~-p~~hpar~~~dt~~l~nP~s~~~~~~~~~~~~~~vLRt 177 (350)
T 1b7y_A 104 TLMERELVEIFR-----ALGYQAVEGPEVESEFFNFDALNI-PEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRT 177 (350)
T ss_dssp HHHHHHHHHHHH-----TTTCEECCCCSEEEHHHHTTTTTC-CSSSTTTTSSCCCBEECSSCCCBCTTSCBCCSCEEECS
T ss_pred HHHHHHHHHHHH-----HCCCEEEECcchhcchhHHHhhCC-CCCCccccccccEEEcCccccccccccccccccceeec
Confidence 344455554443 36999999998876542 345443 432 245688874211000 00000012233222
Q ss_pred chhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHH
Q psy10095 385 AHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQN 464 (680)
Q Consensus 385 aeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~ee 464 (680)
+-...++-.... ...|+|++.+|+|||++. .|.. ...||+.||.+.+- .. .-|..
T Consensus 178 ~tsp~llr~l~~-----~~~piriFEiGrVFR~d~------------~d~t---H~pEF~qlegl~~g-~~----v~f~d 232 (350)
T 1b7y_A 178 HTSPMQVRYMVA-----HTPPFRIVVPGRVFRFEQ------------TDAT---HEAVFHQLEGLVVG-EG----IAMAH 232 (350)
T ss_dssp SSTHHHHHHHHH-----CCSSEEEEEEEEEECCCC------------CCSS---CCSEEEEEEEEEEE-TT----CCHHH
T ss_pred cchHHHHHHHHh-----cCCCeeEEEeeeEEECCC------------CCCC---CCChhHEEEEEEEC-CC----CCHHH
Confidence 211222222211 467999999999999851 1222 23799999999976 21 12778
Q ss_pred HHHHHHHHHHHc-CCceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecC
Q psy10095 465 IQSLLKSVMDKL-NMKYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLN 517 (680)
Q Consensus 465 ml~~~e~il~~L-~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~S 517 (680)
+....+.+++.| |...++-.-++..=-.-.++..||-+ .-.+.|.||.-|-
T Consensus 233 LKg~le~ll~~lfG~~~~~r~rps~fPft~Ps~e~~i~~--~~~g~w~eIg~~G 284 (350)
T 1b7y_A 233 LKGAIYELAQALFGPDSKVRFQPVYFPFVEPGAQFAVWW--PEGGKWLELGGAG 284 (350)
T ss_dssp HHHHHHHHHHHHSCSSCCEEEEECCBTTEEEEEEEEEEE--TTTTEEEEEEEEE
T ss_pred HHHHHHHHHHhhcCCCceEEEecCCCCCCCCccEEEEEE--EeCCCeEEEEEEE
Confidence 888889999988 86422222233211112244444432 2234688888765
No 46
>3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=95.90 E-value=0.045 Score=61.32 Aligned_cols=92 Identities=18% Similarity=0.286 Sum_probs=61.9
Q ss_pred CCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCC-ce
Q psy10095 402 KDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNM-KY 480 (680)
Q Consensus 402 ~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~L-py 480 (680)
...|+|++.+|+|||.+. ..--+.++|..+|.+++- . . .-|.++....+.|++.||+ .+
T Consensus 344 ~~~PiriFeiGrVFR~d~---------------~DatHlpeFhQlegl~~~-~-~---v~f~dLKg~Le~~l~~lG~~~~ 403 (508)
T 3l4g_A 344 PFTPVKYFSIDRVFRNET---------------LDATHLAEFHQIEGVVAD-H-G---LTLGHLMGVLREFFTKLGITQL 403 (508)
T ss_dssp SCCCEEEEEEEEEECCSC---------------CCSSSCSEEEEEEEEEEE-E-S---CCHHHHHHHHHHHHHTTTCCCC
T ss_pred CCCCceEEEEccEEecCC---------------CCCCcCCeEEEEEEEEEC-C-C---CCHHHHHHHHHHHHHHcCCcce
Confidence 457999999999999962 122245789999987754 2 1 2467788888999999997 35
Q ss_pred EEeecCCCCCCcccccceeeeeeecCCCceeeeeecC
Q psy10095 481 RICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLN 517 (680)
Q Consensus 481 RVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~S 517 (680)
|.. |+- .-+..- -+.+++|.+|.+.|.||.-|-
T Consensus 404 rfr--ps~-fPfteP-S~ev~i~~~G~~~W~EIGg~G 436 (508)
T 3l4g_A 404 RFK--PAY-NPYTEP-SMEVFSYHQGLKKWVEVGNSG 436 (508)
T ss_dssp EEE--ECC-CTTCSS-EEEEEECCSTTSSCEEEEEEE
T ss_pred Eee--ccC-CCCCCC-eEEEEEEECCccceEEEEeee
Confidence 532 222 111111 233466678888899988775
No 47
>1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A*
Probab=95.86 E-value=0.089 Score=54.73 Aligned_cols=121 Identities=9% Similarity=-0.047 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHhhCCcEeeccCcccch-HHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhh
Q psy10095 313 KFEYLIPIILKDYFTVKHNFMPFTNTDLCKG-VIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFC 391 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~-~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~ 391 (680)
++-..+++.+-+ ++.++||.+|-||.|... +.+..++ .+.. .+.|.+.. .+..++|.- +.+..+-
T Consensus 16 ~~rs~i~~~ir~-~f~~~GF~EVeTP~l~~~~~~~~~~~-~~e~-a~~f~~~~----------~~~~~~L~~-Spe~~~~ 81 (294)
T 1nnh_A 16 DIQTKILEYMTD-FFVKEGFKWLLPVIISPITDPLWPDP-AGEG-MEPAEVEI----------YGVKMRLTH-SMILHKQ 81 (294)
T ss_dssp HHHHHHHHHHHH-HHHHTTCEEECCCCEESCCCCCCSCT-TCCC-CCCCEEEE----------TTEEEEECS-CSHHHHH
T ss_pred HHHHHHHHHHHH-HHHHCCCEEEECCEEEEccchhccCC-CCCc-ceeEEEEc----------CCCCEEecc-ChHHHHH
Confidence 444455555554 445689999999999888 3222220 0111 22344321 122467753 3223222
Q ss_pred hhhcccccCCCCCCceEeeeCcccCCCcccccccccc--CC-CCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHH
Q psy10095 392 AYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKT--SK-HSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSL 468 (680)
Q Consensus 392 ~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaG--s~-G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~ 468 (680)
.+. . .. |.|+..+|+|||.| + +. |+. ..||+.+|.-.+-.+.++...+.++|+..
T Consensus 82 ~l~-----~-~g-~~rvf~ig~~FR~E---------~pq~~~~RH------~~EFtqle~e~~~~~~~~l~~~~e~l~~~ 139 (294)
T 1nnh_A 82 LAI-----A-MG-LKKIFVLSPNIRLE---------SRQKDDGRH------AYEFTQLDFEVERAKMEDIMRLIERLVYG 139 (294)
T ss_dssp HHH-----H-TT-CCEEEEEEEEECCC---------CGGGCSSSC------CSEEEEEEEEEETCCHHHHHHHHHHHHHH
T ss_pred HHh-----h-cC-ccceEEEEccEeCC---------CCCCCCCcc------ccceeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 221 1 22 67999999999997 2 21 222 34999999988643556555566666544
Q ss_pred H
Q psy10095 469 L 469 (680)
Q Consensus 469 ~ 469 (680)
.
T Consensus 140 l 140 (294)
T 1nnh_A 140 L 140 (294)
T ss_dssp H
T ss_pred H
Confidence 4
No 48
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=94.72 E-value=0.013 Score=49.92 Aligned_cols=34 Identities=29% Similarity=0.540 Sum_probs=28.9
Q ss_pred ceeecccccccc-cC-hHHHHHhhccchhhhhhhhc
Q psy10095 55 AQFYCLHCARHF-ID-EHALKEHFRTKVHKRRLKAL 88 (680)
Q Consensus 55 gq~yC~~C~r~F-~~-~~~l~~H~k~K~HKrr~K~l 88 (680)
..|||-.|+.|| -| ..+...|..++.|++-++.-
T Consensus 2 PkYyCdYCd~~lt~Ds~s~Rk~H~~G~kH~~nv~~y 37 (77)
T 3cw1_L 2 PKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDY 37 (77)
T ss_pred CCcccccCCceecCCCHHHHHHHHccHHHHHHHHHH
Confidence 469999999999 34 55589999999999988865
No 49
>2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A*
Probab=93.72 E-value=0.74 Score=47.77 Aligned_cols=124 Identities=14% Similarity=0.149 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCcEeeccCcccchHH-HHhhcCCCCCC-----CCceEeecCCCccccccccCCCceeeccc
Q psy10095 312 AKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVI-VEGYGDHYLSP-----HDNMVLVNNENDLSEIGYEERRNHLVGSA 385 (680)
Q Consensus 312 A~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v-~~g~G~~p~~~-----~~~~~i~~~~~~~~~~~~~~~~l~LigTa 385 (680)
..+.+.+.+++. ..||+++..|.+..... +...+ .|... .+.+++. + ...|=.+.
T Consensus 56 ~~~~~~iR~~l~-----~~Gf~Ev~~s~l~~~~~nf~~l~-~~~~~par~~~d~~~l~--e-----------~~vLRtsl 116 (294)
T 2rhq_A 56 TRTVEEIEDLFL-----GLGYEIVDGYEVEQDYYNFEALN-LPKSHPARDMQDSFYIT--D-----------EILMRTHT 116 (294)
T ss_dssp HHHHHHHHHHHH-----TTTCEECCCCSEEEHHHHTGGGT-CCTTCGGGCTTTSCBSS--S-----------SEEECSSS
T ss_pred HHHHHHHHHHHH-----HCCCEEEcCcceeeehhhHHhhC-CCCCccccccCCcEEEc--C-----------cceeeccC
Confidence 344444444433 46999998887766533 23433 34221 1235542 1 11222222
Q ss_pred hhhhhh-hhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHH
Q psy10095 386 HMSMFC-AYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQN 464 (680)
Q Consensus 386 eevpl~-~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~ee 464 (680)
+ ..+. .+-.|. ...|++++-+|++||++. .|.. ...||+++|.+.+- .. .-|..
T Consensus 117 ~-p~ll~~l~~N~----~~~~~riFEiG~Vfr~d~------------~d~~---h~~Ef~~Le~~~~g-~~----~df~d 171 (294)
T 2rhq_A 117 S-PVQARTMEKRN----GQGPVKIICPGKVYRRDS------------DDAT---HSHQFTQIEGLVVD-KN----IKMSD 171 (294)
T ss_dssp H-HHHHHHHHHTT----TCSCEEEEEEEEEECCCC------------CBTT---BCSEEEEEEEEEEE-SS----CCHHH
T ss_pred H-HHHHHHHHhcC----CCCCccEEEEcCEEecCC------------CCCC---CCChhhEEEEEEEC-CC----CCHHH
Confidence 2 2222 232332 357999999999999851 1111 22499999999865 21 12778
Q ss_pred HHHHHHHHHHHc-CCc
Q psy10095 465 IQSLLKSVMDKL-NMK 479 (680)
Q Consensus 465 ml~~~e~il~~L-~Lp 479 (680)
+....+.+++.| |++
T Consensus 172 lKg~le~ll~~l~g~~ 187 (294)
T 2rhq_A 172 LKGTLELVAKKLFGAD 187 (294)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhCCC
Confidence 888889999988 875
No 50
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=93.25 E-value=0.031 Score=51.31 Aligned_cols=34 Identities=18% Similarity=0.447 Sum_probs=31.5
Q ss_pred eeecccccccccChHHHHHhhccchhhhhhhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRTKVHKRRLKALE 89 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~K~HKrr~K~l~ 89 (680)
.+||..|...|.+...+..|.+||.|+++|+.+.
T Consensus 32 ~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~ 65 (127)
T 1zu1_A 32 DTQCKVCSAVLISESQKLAHYQSRKHANKVRRYM 65 (127)
T ss_dssp SSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHh
Confidence 4899999999999999999999999999998654
No 51
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A*
Probab=93.24 E-value=0.56 Score=52.33 Aligned_cols=117 Identities=11% Similarity=0.093 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhh
Q psy10095 313 KFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCA 392 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~ 392 (680)
++-..+++.+- .++.++||.+|-||-|... .+|- ....|.+..+ .-+.++||- +|.+
T Consensus 175 r~Rs~i~~~iR-~ff~~~gF~EVeTPiL~~~----~~Ga----~a~~F~~~~~--------~~~~~~yLr-~Spq----- 231 (493)
T 3a74_A 175 ITRSLIIQSMR-RYLDSHGYLEVETPMMHAV----AGGA----AARPFITHHN--------ALDMTLYMR-IAIE----- 231 (493)
T ss_dssp HHHHHHHHHHH-HHHHHTTCEECCCCSEESS----CCSS----SSCCCEEEET--------TTTEEEEEC-SCSH-----
T ss_pred HHHHHHHHHHH-HHHHhCCeEEEECCeEEec----CCCC----cccceEeccc--------CCCceeEEe-cCHH-----
Confidence 44444554444 4556789999999999844 3331 1123543310 112357876 3432
Q ss_pred hhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHH
Q psy10095 393 YHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLL 469 (680)
Q Consensus 393 ~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~ 469 (680)
+|.+..+ ... .-|+.-+|+|||.| ++ ++ -|.-+|+.+|+-..-.+.++..++-|+|+...
T Consensus 232 Lylk~l~-v~G-~~rVyeig~~FR~E---------~~---~~---rH~pEFT~lE~e~af~d~~dlm~l~E~ll~~l 291 (493)
T 3a74_A 232 LHLKRLI-VGG-LEKVYEIGRVFRNE---------GI---ST---RHNPEFTMLELYEAYADFRDIMKLTENLIAHI 291 (493)
T ss_dssp HHHHHHH-HTT-CCEEEEEEEEECCC---------CC---BT---TBCSEEEEEEEEEETCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-hcc-cCceEEECccccCC---------CC---Cc---ccCCceeEEEEEecCCCHHHHHHHHHHHHHHH
Confidence 2332222 112 35788899999998 33 22 56779999998873326776666666666443
No 52
>1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii}
Probab=93.02 E-value=0.48 Score=51.94 Aligned_cols=113 Identities=7% Similarity=0.032 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhh
Q psy10095 313 KFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCA 392 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~ 392 (680)
++-..+++.+-+ ++.++||.+|-||-|... +++ ...+.|.+.. .+..+||--+.+ ..+-.
T Consensus 135 ~~rs~i~~~ir~-ff~~~gF~eV~TP~l~~~----~~e----~~~~~f~~~~----------~~~~~~L~~Spq-l~~~~ 194 (429)
T 1wyd_A 135 KIQSLALKAFRE-TLYKEGFIEIFTPKIIAS----ATE----GGAQLFPVIY----------FGKEAFLAQSPQ-LYKEL 194 (429)
T ss_dssp HHHHHHHHHHHH-HHHHTTCEECCCCSEESS----CSS----TTCCCCEEEE----------TTEEEEECSCCH-HHHHH
T ss_pred HHHHHHHHHHHH-HHhhCCCEEEECCEEEee----CCC----CCceeEEEec----------CCceEEecCCcH-HHHHH
Confidence 444455555454 446689999999999966 222 2223455431 123477842222 32222
Q ss_pred hhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhh-hccceEEEEEecCChhHHHHHHHHHHHH
Q psy10095 393 YHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNS-IQREKVNLFVGTNNHENLCKEFQNIQSL 468 (680)
Q Consensus 393 ~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~Rv-HQF~KVE~f~~~~~pe~S~~~~eeml~~ 468 (680)
+ +. . +-|+..+|+|||.| ++.+. |- .+|+.+|.-..-.+.++..++.++|+..
T Consensus 195 ~-----~~-g--~~rvf~ig~~FR~E---------~~~~~------RH~pEFtqle~e~~~~~~~dlm~~~e~ll~~ 248 (429)
T 1wyd_A 195 M-----AG-V--VERVFEVAPAWRAE---------ESDTP------FHLAEFISMDVEMAFADYNDVMQLLEKILHN 248 (429)
T ss_dssp H-----HH-H--HSEEEEEEEEECCC---------CCCSS------SCCSEEEEEEEEEETCCHHHHHHHHHHHHHH
T ss_pred H-----Hh-C--cCceEEEccccccc---------CCccc------cccceeeEeeeeecCCCHHHHHHHHHHHHHH
Confidence 1 11 1 57999999999997 22210 22 3999999987543555555555555533
No 53
>3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens}
Probab=92.97 E-value=0.36 Score=54.21 Aligned_cols=117 Identities=9% Similarity=0.019 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhh
Q psy10095 313 KFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCA 392 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~ 392 (680)
++--.+++..- .++.++||.+|-||-|... .+|-.. ..|.+.. + .-+.++||.=+.+ .
T Consensus 177 r~Rs~i~~~iR-~f~~~~gF~EVeTPiL~~~----~gGa~a----~~F~t~~--~------~~~~~~yL~~Spq-L---- 234 (521)
T 3bju_A 177 IIRSKIITYIR-SFLDELGFLEIETPMMNII----PGGAVA----KPFITYH--N------ELDMNLYMRIAPE-L---- 234 (521)
T ss_dssp HHHHHHHHHHH-HHHHHTTCEECCCCSEESS----CCSSSC----CCCEEEE--T------TTTEEEEECSCSH-H----
T ss_pred HHHHHHHHHHH-HHHHHCCCEEEeCceeecc----CCCccc----cceeeec--c------cCCcceEeeCCHH-H----
Confidence 34444454444 4556789999999999843 234111 2243321 0 0123577764333 2
Q ss_pred hhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEE-ecCChhHHHHHHHHHHHHHH
Q psy10095 393 YHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFV-GTNNHENLCKEFQNIQSLLK 470 (680)
Q Consensus 393 ~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~-~~~~pe~S~~~~eeml~~~e 470 (680)
|....+- ..+ =|+.-+|+|||.| |.++ -+.-.|+.+|.-. ++ +.++..++-|+|+..+.
T Consensus 235 -~lk~liv-~g~-~rVyeig~~FR~E------------~~~t---rH~pEFtmlE~e~af~-d~~dlm~l~E~li~~v~ 294 (521)
T 3bju_A 235 -YHKMLVV-GGI-DRVYEIGRQFRNE------------GIDL---THNPEFTTCEFYMAYA-DYHDLMEITEKMVSGMV 294 (521)
T ss_dssp -HHHHHHH-TTC-CEEEEEEEEECCS------------CCBT---TBCSEEEEEEEEEETC-CHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHh-cCc-CceEEEEcceeCC------------CCCC---ccchhhhhhhhhhhcC-CHHHHHHHHHHHHHHHH
Confidence 2221111 112 2688889999997 3344 3667899999987 55 78887777777775443
No 54
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=92.30 E-value=0.53 Score=50.19 Aligned_cols=124 Identities=6% Similarity=-0.052 Sum_probs=66.2
Q ss_pred hHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhh
Q psy10095 311 AAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMF 390 (680)
Q Consensus 311 gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl 390 (680)
..++--.+++ ++..++.++||.+|-||.|.....-++. ...|.+.-++.. . ..+..+||.=+.+ .-+
T Consensus 35 ~lr~Rs~i~~-~iR~ff~~~gF~EVeTPiL~~~~~~~a~-------~~~F~~~~~~~~--~--~~~~~~yL~~Spq-l~~ 101 (345)
T 3a5y_A 35 NLLKRAAIMA-EIRRFFADRGVLEVETPCMSQATVTDIH-------LVPFETRFVGPG--H--SQGMNLWLMTSPE-YHM 101 (345)
T ss_dssp HHHHHHHHHH-HHHHHHHHTTCEECCCCSEESSCCCCTT-------CCCCEEEECCST--T--SCCEEEEECSCSH-HHH
T ss_pred HHHHHHHHHH-HHHHHHHHCCCEEEECCEEEecCCCCCc-------cceEEEEecCcc--c--ccCCCEeecCCHH-HHH
Confidence 3344444444 4445667789999999999976421111 122433311100 0 0013478764333 211
Q ss_pred hhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHH
Q psy10095 391 CAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLL 469 (680)
Q Consensus 391 ~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~ 469 (680)
--+.. ..+ =|+.-+++|||.| ++ +--+.-+|+.+|+-..-.+.++..++.|+|+..+
T Consensus 102 k~l~~------~g~-~rvyqIg~~FR~E---------~~------~~rH~pEFt~lE~e~af~d~~d~m~~~E~li~~v 158 (345)
T 3a5y_A 102 KRLLV------AGC-GPVFQLCRSFRNE---------EM------GRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQV 158 (345)
T ss_dssp HHHHH------TTC-CSEEEEEEEECCC---------CC------BTTBCSEEEEEEEEEETCCHHHHHHHHHHHHHHH
T ss_pred HHHHH------cCC-CcEEEEEcceeCC---------CC------cccccchhheeeeeeeCCCHHHHHHHHHHHHHHH
Confidence 10110 112 2788999999998 33 2345668999998773325665555555555443
No 55
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=92.27 E-value=0.52 Score=51.70 Aligned_cols=112 Identities=11% Similarity=0.010 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhh
Q psy10095 313 KFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCA 392 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~ 392 (680)
++-..+++.+-+ ++.++||.+|-||.|... .++ ...+.|.+.. .+..+||- ++.+..+-.
T Consensus 136 ~~rs~i~~~ir~-~f~~~gF~eVeTP~l~~~----~~e----~~~~~f~~~~----------~~~~~~Lr-~Spel~~~~ 195 (434)
T 1x54_A 136 KVKETLIMAARE-WLLKDGWHEVFPPILVTG----AVE----GGATLFKLKY----------FDKYAYLS-QSAQLYLEA 195 (434)
T ss_dssp HHHHHHHHHHHH-HHHHTTCEECCCCSEESC----CSS----CGGGCCEEEE----------TTEEEEEC-SCSHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHCCCEEEeCcEEEee----cCC----CCceeEEEee----------cCCcEEec-cChHHHHHH
Confidence 344455555554 445689999999999966 222 1223344431 12346776 332222211
Q ss_pred hhcccccCCCCCCceEeeeCcccCCCccccccccccC-CCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHH
Q psy10095 393 YHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTS-KHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQS 467 (680)
Q Consensus 393 ~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs-~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~ 467 (680)
.+. -|.|+..+|+|||.| ++ +++. ..+|+.+|.-.+-.+.++...+.++|+.
T Consensus 196 -----~~~---g~~rvf~ig~~FR~E---------~~~~~RH------~pEFtqle~e~~~~~~~dlm~~~e~ll~ 248 (434)
T 1x54_A 196 -----AIF---GLEKVWSLTPSFRAE---------KSRTRRH------LTEFWHLELEAAWMDLWDIMKVEEELVS 248 (434)
T ss_dssp -----HHH---HHSEEEEEEEEECCC---------CCCCSSC------CSEEEEEEEEEETCCHHHHHHHHHHHHH
T ss_pred -----Hhc---CccceEEEecceecC---------CCCCccc------ccEEEEeeEEEcCCCHHHHHHHHHHHHH
Confidence 111 277999999999997 22 2211 2499999998854355555555555553
No 56
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces cerevisiae}
Probab=92.22 E-value=0.054 Score=59.03 Aligned_cols=58 Identities=21% Similarity=0.399 Sum_probs=41.3
Q ss_pred CCchhhhhhcccchhHh-hhccCCCCCCCCCceeecccccccccChHHHHHhhccchhhhhhh
Q psy10095 25 RDLDQIDGDCKEENAEK-LLHQEIDFDKPGEAQFYCLHCARHFIDEHALKEHFRTKVHKRRLK 86 (680)
Q Consensus 25 kd~Dqi~~dl~~~~~~~-~~~~~~d~dlpG~gq~yC~~C~r~F~~~~~l~~H~k~K~HKrr~K 86 (680)
-|+|.|...+..+ .++ .....+.. ..+-.||..|+|+|.+......|..+|.|+|.+.
T Consensus 264 ~dld~~~~~~~~e-FE~~~w~~~~~~---~~~~l~C~~c~K~Fs~~~v~~~hL~GKkh~K~~~ 322 (402)
T 4dgw_A 264 LDAAAVENLIKSD-FEHSYCRGSLRS---EAKGIYCPFCSRWFKTSSVFESHLVGKIHKKNES 322 (402)
T ss_dssp SCHHHHHHHHHHH-HHHTGGGTCCEE---TTTEECBTTTTBCBSSHHHHHTTSSSHHHHHHHH
T ss_pred cCHHHHHHHHHHH-HHHHHhhcCCcC---CCcCeeehhhhhhhccccccHHHhcccccchhHH
Confidence 3899888876542 222 22112211 2356899999999999999999999999998643
No 57
>3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli}
Probab=91.93 E-value=0.67 Score=49.16 Aligned_cols=90 Identities=12% Similarity=0.299 Sum_probs=56.2
Q ss_pred CCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHc---CC
Q psy10095 402 KDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKL---NM 478 (680)
Q Consensus 402 ~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L---~L 478 (680)
...|++++.+|++||++. | --..++|..+|-+.+- ..- -|.++....+.+++.| ++
T Consensus 181 ~~~pirifeiGrVyR~d~-------------d---~th~p~fhqlegl~v~-~~v----~f~dLKg~Le~~l~~lfg~~~ 239 (327)
T 3pco_A 181 QQPPIRIIAPGRVYRNDY-------------D---QTHTPMFHQMEGLIVD-TNI----SFTNLKGTLHDFLRNFFEEDL 239 (327)
T ss_dssp CCSSCCBCCEECCBCSCC-------------B---TTBCSBCCEEEEEEEE-TTC----CHHHHHHHHHHHHHHHHCSCS
T ss_pred CCCCeeEEeeccEEecCC-------------C---cccCCcccEEEEEEEC-CCC----CHHHHHHHHHHHHHHHhCCCc
Confidence 467999999999999831 1 1233568889966654 211 2667888888888888 46
Q ss_pred ceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecC
Q psy10095 479 KYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLN 517 (680)
Q Consensus 479 pyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~S 517 (680)
.+|.. |+-.=..-.++..||- . ..+.|.||.-|-
T Consensus 240 ~vr~r--ps~fPftePs~eadI~--~-~~G~w~EIgg~G 273 (327)
T 3pco_A 240 QIRFR--PSYFPFTEPSAEVDVM--G-KNGKWLEVLGCG 273 (327)
T ss_dssp EEEEE--EECCTTEEEEEEEEEE--C-SSSCEEEEEEEE
T ss_pred eEEEe--cCcCCCCCCcEEEEEE--E-eCCCeEEEEEEE
Confidence 66542 3332111224555553 3 246699988775
No 58
>2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A*
Probab=91.71 E-value=0.8 Score=50.21 Aligned_cols=114 Identities=10% Similarity=0.072 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhh
Q psy10095 313 KFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCA 392 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~ 392 (680)
++--.+++.+- .++.++||.+|-||-|..+.+ +|.+ +.|.+.. -+..+||.-+.+ .
T Consensus 133 r~Rs~i~~~iR-~ff~~~gFlEVeTPiL~~s~~-eG~~-------~~F~~~~----------~g~~~~L~~Spq-L---- 188 (435)
T 2xgt_A 133 RLRAAATRAMR-EHFYNAGYVEVAPPTLVQTQV-EGGS-------TLFNLDY----------FGEQSFLTQSSQ-L---- 188 (435)
T ss_dssp HHHHHHHHHHH-HHHHHTTCEECCCCSEESCCS-SCTT-------SCCEEEE----------TTEEEEECSCSH-H----
T ss_pred HHHHHHHHHHH-HHHHHCCCEEEECCeEeeccC-CCch-------hceeecc----------CCcccccCCChH-H----
Confidence 44444554444 455678999999999987753 3322 2344431 122457753333 1
Q ss_pred hhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEE-ecCChhHHHHHHHHHHHHH
Q psy10095 393 YHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFV-GTNNHENLCKEFQNIQSLL 469 (680)
Q Consensus 393 ~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~-~~~~pe~S~~~~eeml~~~ 469 (680)
|....+. . + =|+.-+|+|||.| ++.+. --.-+|+.+|.-. ++ +.++..++.|+|+..+
T Consensus 189 -ylq~l~~-g-~-~rvfeIg~~FR~E---------~~~t~-----RH~~EFT~lE~e~af~-d~~d~m~~~E~li~~~ 247 (435)
T 2xgt_A 189 -YLETCIP-T-L-GDVFCIAQSYRAE---------KSRTR-----RHLAEYAHVEAECPFI-TLDDLMEKIEELVCDT 247 (435)
T ss_dssp -HHHHHHH-H-H-CSEEEEEEEECCC---------SSCCT-----TCCSEEEEEEEEEESC-CHHHHHHHHHHHHHHH
T ss_pred -HHHHhhh-c-c-CceEEEecceecC---------CCCcc-----ccccceeEEEEEEecC-CHHHHHHHHHHHHHHH
Confidence 2221111 1 1 2688888999987 33321 1123899999987 55 7887777777777554
No 59
>1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A
Probab=91.40 E-value=1.1 Score=50.12 Aligned_cols=116 Identities=13% Similarity=0.055 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhh
Q psy10095 313 KFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCA 392 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~ 392 (680)
++--.+++.+- .++.++||.+|-||-|... .+|-.. ..|.+..+ .-+.++||- +|.+
T Consensus 184 r~Rs~i~~~iR-~f~~~~gFlEVeTPiL~~~----~~Ga~a----r~F~t~~~--------~~~~~~yL~-~Spq----- 240 (504)
T 1e1o_A 184 VVRSKILAAIR-QFMVARGFMEVETPMMQVI----PGGASA----RPFITHHN--------ALDLDMYLR-IAPE----- 240 (504)
T ss_dssp HHHHHHHHHHH-HHHHTTTCEECCCCSEESS----CCSSCC----CCCEEEET--------TTTEEEEEC-SCSH-----
T ss_pred HHHHHHHHHHH-HHHHHCCCEEEECCeEEec----CCCCcc----cceEeccC--------CCCceEEec-cCHH-----
Confidence 33444454444 5566789999999999843 233111 23433210 012357776 3322
Q ss_pred hhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEE-ecCChhHHHHHHHHHHHHH
Q psy10095 393 YHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFV-GTNNHENLCKEFQNIQSLL 469 (680)
Q Consensus 393 ~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~-~~~~pe~S~~~~eeml~~~ 469 (680)
+|....+ ..- .=|+.-+|+|||.| ++ ++ -+.-+|+.+|+-. ++ +.++..++-|+|+..+
T Consensus 241 Lylk~L~-v~G-~~rVyeIg~~FR~E---------~~---~~---rH~pEFt~lE~e~af~-d~~dlm~l~E~li~~~ 300 (504)
T 1e1o_A 241 LYLKRLV-VGG-FERVFEINRNFRNE---------GI---SV---RHNPEFTMMELYMAYA-DYHDLIELTESLFRTL 300 (504)
T ss_dssp HHHHHHH-HHT-CCEEEEEEEEECCC---------CC---CC----CCSEEEEEEEEEESC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-hcC-CCcEEEEcccccCC---------CC---Cc---cccCceeeeeeeecCC-CHHHHHHHHHHHHHHH
Confidence 2222211 111 24788899999998 33 22 5677999999987 45 7777777777776544
No 60
>2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii}
Probab=90.90 E-value=1 Score=50.93 Aligned_cols=95 Identities=8% Similarity=0.215 Sum_probs=62.1
Q ss_pred CCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCCc-e
Q psy10095 402 KDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNMK-Y 480 (680)
Q Consensus 402 ~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~Lp-y 480 (680)
...|++++.+|+|||+++ . .|.. ...||..++.+.+- .+ .-|.++...++.+++.||++ +
T Consensus 214 ~~~pvrlFEiGrVFr~D~--------~---~d~t---h~~ef~qLaglv~G-~~----vdF~DLKG~Le~ll~~LGi~~~ 274 (549)
T 2du7_A 214 RKLPLKLFSIDRCFRREQ--------R---EDRS---HLMSYHSASCVVVG-ED----VSVDDGKVVAEGLLAQFGFTKF 274 (549)
T ss_dssp SCSSEEEEEEEEECCCCS--------S---CSSS---CCSCEEEEEEEEEC-TT----CCHHHHHHHHHHHHGGGTCCCC
T ss_pred CCCCeEEEEEeeEEecCC--------c---ccCc---CCCcceEEEEEEEC-CC----CCHHHHHHHHHHHHHHcCCCeE
Confidence 478999999999999851 0 0111 23799999999876 32 24788999999999999983 5
Q ss_pred EEeecCCC--CCCcccccceeeeeeecCCCceeeeeecC
Q psy10095 481 RICKAPAD--VLHTSESHRLEYQVYSYSLNSWVTCMDLN 517 (680)
Q Consensus 481 RVv~m~tg--dLg~~a~kkyDIEvW~P~~~~Y~EisS~S 517 (680)
|+.. +. .=.+-..+...|.++.|+.+.|.||..|-
T Consensus 275 rfrp--s~~~~p~yhPGr~AeI~v~~~g~~gw~eIG~~G 311 (549)
T 2du7_A 275 KFKP--DEKKSKYYTPETQTEVYAYHPKLGEWIEVATFG 311 (549)
T ss_dssp CCEE--CTTCCTTBCTTTCEEEEECCSSSSCSEEEEEEE
T ss_pred EEEE--CCCCCcccCCceEEEEEEecCCCCCcEEEEEEE
Confidence 5442 21 11233344455555545544677877765
No 61
>3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A
Probab=90.14 E-value=1.4 Score=48.63 Aligned_cols=112 Identities=13% Similarity=0.070 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhh
Q psy10095 313 KFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCA 392 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~ 392 (680)
++--++++. +..++.++||.+|-||-|+.+. .+|.+- .|.+.-. +..+||.-+.+ .
T Consensus 157 r~Rs~i~~~-iR~ff~~~gF~EVeTPiL~~s~-~eGg~~-------~f~~~~~----------~~~~~L~~Spq-L---- 212 (456)
T 3m4p_A 157 QLRSEIQWY-FRKYYHDNHFTEIQPPTIVKTQ-CEGGST-------LFKLQYF----------NEPAYLTQSSQ-L---- 212 (456)
T ss_dssp HHHHHHHHH-HHHHHHHTTCEECCCCSEEC-------CC-------CCEEEET----------TEEEEECSCCH-H----
T ss_pred HHHHHHHHH-HHHHHHhCCCEEEeCCeeecCC-CCCccc-------ccccccc----------CCCcccccCHH-H----
Confidence 334444444 4455567899999999998865 345442 2333210 12457754333 1
Q ss_pred hhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhh--ccceEEEEE-ecCChhHHHHHHHHHHHHH
Q psy10095 393 YHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSI--QREKVNLFV-GTNNHENLCKEFQNIQSLL 469 (680)
Q Consensus 393 ~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvH--QF~KVE~f~-~~~~pe~S~~~~eeml~~~ 469 (680)
|....+. . + =|+.-+|+|||.| ++.+ +-| .|+.+|.-. ++ +.++..++.|+|+..+
T Consensus 213 -~lq~l~~-g-~-~rVyeig~~FR~E---------~~~t-------~rH~pEFtmlE~e~af~-d~~d~m~~~E~li~~~ 271 (456)
T 3m4p_A 213 -YLESVIA-S-L-GKSFCMLSSYRAE---------QSRT-------VRHLAEYLHLEAELPFI-SFEDLLNHLEDLVCTV 271 (456)
T ss_dssp -HHHTTHH-H-H-SSEEEEEEEECCC---------SCCC-------SSCCSEEEEEEEEEESC-CHHHHHHHHHHHHHHH
T ss_pred -HHHHHHh-c-c-CcEEEEEhheecC---------CCCC-------CcchHHHHHhHHHHhcC-CHHHHHHHHHHHHHHH
Confidence 2221111 1 2 3466688888887 3321 224 899999987 55 7887777777776544
No 62
>3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A*
Probab=89.70 E-value=1.4 Score=48.54 Aligned_cols=113 Identities=8% Similarity=0.017 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhhh
Q psy10095 314 FEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAY 393 (680)
Q Consensus 314 LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~ 393 (680)
+--++++ ++..++.++||.+|-||-|.... .+|.+ +.|.+.. -+..+||.-+.+ .
T Consensus 139 ~Rs~i~~-~iR~f~~~~gF~EVeTPiL~~~~-~eg~~-------~~f~~~~----------~~~~~yL~~Spq-l----- 193 (438)
T 3nem_A 139 IRSSVFK-AVRDFFHENGFIEIHTPKIIATA-TEGGT-------ELFPMKY----------FEEDAFLAQSPQ-L----- 193 (438)
T ss_dssp HHHHHHH-HHHHHHHHTTCEECCCCSEESSC-SSCSS-------SCCEEEE----------TTEEEEECSCSH-H-----
T ss_pred HHHHHHH-HHHHHHHHCCcEEEeCCEEecCC-CCCCc-------cceeEee----------CCccEEEecChH-H-----
Confidence 3334444 44445567899999999998874 34433 2343331 123467764343 2
Q ss_pred hcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhh--ccceEEEEE-ecCC-hhHHHHHHHHHHHHH
Q psy10095 394 HTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSI--QREKVNLFV-GTNN-HENLCKEFQNIQSLL 469 (680)
Q Consensus 394 ~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvH--QF~KVE~f~-~~~~-pe~S~~~~eeml~~~ 469 (680)
|....+ ...+ -|+..+|+|||.| ++.+ +-| +|+.+|+-. ++ + .++..++.|+|+..+
T Consensus 194 ~~q~l~-~~g~-~rvf~i~~~FR~E---------~~~t-------~RH~pEFt~le~e~a~~-~~~~d~m~~~E~li~~~ 254 (438)
T 3nem_A 194 YKQIMM-ASGL-DRVYEIAPIFRAE---------EHNT-------TRHLNEAWSIDSEMAFI-EDEEEVMSFLERLVAHA 254 (438)
T ss_dssp HHHHGG-GTTC-CEEEEEEEEECCC---------SSCC-------TTCCSEEEEEEEEEESC-SSHHHHHHHHHHHHHHH
T ss_pred HHHHHH-hcCC-CceEEEcceEECC---------CCCC-------cccccceeeeeeeeccC-ccHHHHHHHHHHHHHHH
Confidence 222111 1122 3888899999997 2221 124 899999987 55 5 888777777777554
Q ss_pred H
Q psy10095 470 K 470 (680)
Q Consensus 470 e 470 (680)
-
T Consensus 255 ~ 255 (438)
T 3nem_A 255 I 255 (438)
T ss_dssp H
T ss_pred H
Confidence 3
No 63
>1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A*
Probab=89.57 E-value=1.4 Score=48.97 Aligned_cols=117 Identities=7% Similarity=0.077 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhh
Q psy10095 311 AAKFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMF 390 (680)
Q Consensus 311 gA~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl 390 (680)
..++-.++++.+-+ ++.++||.+|-||.|.... || .....|.+.. .+..+||-=+.+ .
T Consensus 177 ~~~~rs~i~~~ir~-~~~~~gF~EV~TPil~~~~----~~----~ga~~f~~~~----------~~~~~~L~~Spq-l-- 234 (487)
T 1eov_A 177 IFRIQAGVCELFRE-YLATKKFTEVHTPKLLGAP----SE----GGSSVFEVTY----------FKGKAYLAQSPQ-F-- 234 (487)
T ss_dssp HHHHHHHHHHHHHH-HHHHTTCEECCCCSEESSC----SS----SSSCCCEEEE----------TTEEEEECSCTH-H--
T ss_pred HHHHHHHHHHHHHH-HHHhCCcEEEeCCEEEEec----CC----CCcccceecc----------CCccEEcccChH-H--
Confidence 33445555555554 4566899999999999864 33 1223455542 123578863333 2
Q ss_pred hhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhh-hccceEEEE-EecCChhHHHHHHHHHHHH
Q psy10095 391 CAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNS-IQREKVNLF-VGTNNHENLCKEFQNIQSL 468 (680)
Q Consensus 391 ~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~Rv-HQF~KVE~f-~~~~~pe~S~~~~eeml~~ 468 (680)
|....+ ... +-|+.-+|+|||.| ++.+ -|- -+|+.+|+- ++..+.++..++-|+|+..
T Consensus 235 ---~~k~l~-~~g-~~rvy~ig~~FR~E---------~~~~------~Rh~pEFt~le~e~af~~~~~dlm~l~E~ll~~ 294 (487)
T 1eov_A 235 ---NKQQLI-VAD-FERVYEIGPVFRAE---------NSNT------HRHMTEFTGLDMEMAFEEHYHEVLDTLSELFVF 294 (487)
T ss_dssp ---HHHHHH-HTT-CCEEEEEEEEECCC---------CCCC------TTCCSEEEEEEEEEECSSCTHHHHHHHHHHHHH
T ss_pred ---HHHHHH-hcC-CCceEEEeccEecC---------CCCC------CccchhhhhhhhhhhhhcCHHHHHHHHHHHHHH
Confidence 222111 111 45899999999998 3321 122 299999994 4653467666666766644
Q ss_pred H
Q psy10095 469 L 469 (680)
Q Consensus 469 ~ 469 (680)
.
T Consensus 295 l 295 (487)
T 1eov_A 295 I 295 (487)
T ss_dssp H
T ss_pred H
Confidence 3
No 64
>1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A
Probab=89.56 E-value=1.4 Score=50.17 Aligned_cols=116 Identities=13% Similarity=0.083 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCce-eeccchhhhhhh
Q psy10095 314 FEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNH-LVGSAHMSMFCA 392 (680)
Q Consensus 314 LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~-LigTaeevpl~~ 392 (680)
+--.+++.+- .++.++||.+|-||.|.++. -+|.+ + |.+.++. ...++| |- ++-+.
T Consensus 146 ~Rs~i~~~iR-~fl~~~gF~EVeTPiL~~s~-~eGAr-------~-F~v~~~~--------~~~~~y~L~-qSPQl---- 202 (580)
T 1l0w_A 146 LRHRVIKAIW-DFLDREGFVQVETPFLTKST-PEGAR-------D-FLVPYRH--------EPGLFYALP-QSPQL---- 202 (580)
T ss_dssp HHHHHHHHHH-HHHHHTTCEECCCCSSBCCC-SSSSC-------C-CEEECTT--------STTEEEECC-SCSHH----
T ss_pred HHHHHHHHHH-HHHHhCCcEEEeCCEEecCC-CCCCC-------C-ccccccc--------cCCceeECc-cCHHH----
Confidence 3344444444 45566899999999999763 23332 2 4333210 012344 53 33221
Q ss_pred hhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEE-ecCChhHHHHHHHHHHHHHHH
Q psy10095 393 YHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFV-GTNNHENLCKEFQNIQSLLKS 471 (680)
Q Consensus 393 ~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~-~~~~pe~S~~~~eeml~~~e~ 471 (680)
|....+ ..-+ =||.-+++|||.| ++ ++ -|.-.|+.+|+-. ++ +.++..++.|+|+..+-.
T Consensus 203 -~kq~Lm-v~G~-~rvfqI~~~FR~E---------~~---~~---~r~pEFT~lE~e~af~-d~~dvm~~~E~li~~i~~ 263 (580)
T 1l0w_A 203 -FKQMLM-VAGL-DRYFQIARCFRDE---------DL---RA---DRQPDFTQLDLEMSFV-EVEDVLELNERLMAHVFR 263 (580)
T ss_dssp -HHHHHH-HTTC-SEEEEEEEEECCC---------CC---CS---SCCSEEEEEEEEEESC-CHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHH-Hhcc-CCeEEEeceeeCC---------CC---CC---CcCCCccceeeeecCC-CHHHHHHHHHHHHHHHHH
Confidence 111111 1222 2788899999998 22 22 2555999999987 55 788877777877755543
No 65
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=89.47 E-value=0.15 Score=32.18 Aligned_cols=24 Identities=29% Similarity=0.700 Sum_probs=21.5
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.|-|..|++.|.+...|..|.++
T Consensus 1 ~~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2m0f_A 1 GPLKCRECGKQFTTSGNLKRHLRI 24 (29)
T ss_dssp CCEECTTTSCEESCHHHHHHHHHH
T ss_pred CCccCCCCCCccCChhHHHHHHHH
Confidence 458899999999999999999864
No 66
>3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica}
Probab=89.43 E-value=1.2 Score=50.28 Aligned_cols=116 Identities=12% Similarity=0.142 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhh
Q psy10095 313 KFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCA 392 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~ 392 (680)
++--++++.+- .++.++||.+|-||-|.... -+|.+ ..|.+.. -+..+||.=+.+
T Consensus 245 r~Rs~i~~~iR-~ff~~~gF~EVeTPiL~~~~-~egga-------~~F~v~~----------~~~~~yL~~Spq------ 299 (548)
T 3i7f_A 245 RIQSACCGLFR-EFLTSQKFVEIHTPKLIGCS-SEGGS-------NIFEVKY----------FDRKAYLAQSPQ------ 299 (548)
T ss_dssp HHHHHHHHHHH-HHHHHTTCEECCCCSBC-------------------------------------CCBCSCTH------
T ss_pred HHHHHHHHHHH-HHHHhCCCEEEeCCEEeccc-CCCCc-------ceeEEec----------CCCceEeccCHH------
Confidence 34445555444 45566899999999999886 34333 1233221 012467764333
Q ss_pred hhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEE-ecCChhHHHHHHHHHHHHH
Q psy10095 393 YHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFV-GTNNHENLCKEFQNIQSLL 469 (680)
Q Consensus 393 ~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~-~~~~pe~S~~~~eeml~~~ 469 (680)
+|....+- ..+ =|+..+|+|||.| ++.+ ---.-.|+.+|+-. +..+.++..++.|+|+..+
T Consensus 300 l~~k~ll~-~g~-~rVfeI~~~FR~E---------~~~t-----~RHl~EFtmlE~e~af~~d~~d~m~~~E~li~~i 361 (548)
T 3i7f_A 300 LYKQMAIM-GDF-RKVFEVGPVFRAE---------NSNT-----RRHLTEFEGLDIEMEIVENYHECIDVMEKLFTFI 361 (548)
T ss_dssp HHHHHHHT-TTC-CEEEEEEEECCCS---------CCCS-----SSCCSCEEEEEEEEECSSCTHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-cCc-CcEEEEeeeEecC---------CCCC-----CCcchhhhchhhhhhhhcCHHHHHHHHHHHHHHH
Confidence 23333222 222 4788899999997 3321 11123899999975 5535777777777777543
No 67
>3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* 3teg_A* 3tup_A
Probab=88.78 E-value=3.4 Score=45.10 Aligned_cols=172 Identities=11% Similarity=0.031 Sum_probs=93.2
Q ss_pred hHHHHHHHHHHHHHHHHh---hCCcEeecc-CcccchHHHHhhcCCCCCC-----CCceEeecCCCccccccccCCCcee
Q psy10095 311 AAKFEYLIPIILKDYFTV---KHNFMPFTN-TDLCKGVIVEGYGDHYLSP-----HDNMVLVNNENDLSEIGYEERRNHL 381 (680)
Q Consensus 311 gA~LE~ALi~y~ld~~~~---~~Gf~~i~~-P~~Vr~~v~~g~G~~p~~~-----~~~~~i~~~~~~~~~~~~~~~~l~L 381 (680)
.-.+...+.+++...+.. ..||+++.+ |.++...--...=..|.+- .+.||+.. ..+
T Consensus 50 l~~~~~~i~~~f~~~~~~~~g~~Gf~e~~~~~~v~s~~~NFd~L~~p~dHpaR~~~Dtfyi~~--------------~~v 115 (415)
T 3cmq_A 50 LWLIKERVKEHFYKQYVGRFGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNR--------------THM 115 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSCCCEEECCCCSEEEHHHHTGGGTCCTTCGGGCGGGSCBSSS--------------SEE
T ss_pred HHHHHHHHHHHHHhhhccccCCCCcEEEcCCCccccHHHHHHHhCCCCCCCcccccceEEecC--------------CeE
Confidence 455666666666643211 128999998 8888776554444456542 45566641 133
Q ss_pred eccchhhhhhhhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEe----------
Q psy10095 382 VGSAHMSMFCAYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVG---------- 451 (680)
Q Consensus 382 igTaeevpl~~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~---------- 451 (680)
+-|.-..-++-+... ..| |++.+|.+||.++ .|. ....+|.++|-+.+
T Consensus 116 LRThts~~~~~~l~~------~~~-k~~~~G~VyR~D~------------~da---~h~n~fhQ~egv~lfe~g~~f~~~ 173 (415)
T 3cmq_A 116 LRAHTSAHQWDLLHA------GLD-AFLVVGDVYRRDQ------------IDS---QHYPIFHQLEAVRLFSKHELFAGI 173 (415)
T ss_dssp ECSSGGGGHHHHHHT------TCS-EEEEEEEEECCCC------------CBT---TBCSEEEEEEEEEEEEHHHHTTTS
T ss_pred EcCCCcHHHHHHHHH------CCC-CEEEeeeEEeccc------------hhh---hhhHHhcCCCcEEEEeccceeccc
Confidence 333211112222221 136 9999999999952 122 12234444444333
Q ss_pred ----------c----------CChhHHHHHHHHHHHHHHHHHHHc-CCc--eEEeecCCCCCCcccccceeeeeeecCCC
Q psy10095 452 ----------T----------NNHENLCKEFQNIQSLLKSVMDKL-NMK--YRICKAPADVLHTSESHRLEYQVYSYSLN 508 (680)
Q Consensus 452 ----------~----------~~pe~S~~~~eeml~~~e~il~~L-~Lp--yRVv~m~tgdLg~~a~kkyDIEvW~P~~~ 508 (680)
+ .+++..+.-|..+....+.+++.| |++ +|+.. +..=.+-..+..|| |. .+
T Consensus 174 ~~~~~la~~~~g~~~~~~~~~~~~~~vd~~f~dlKg~le~ll~~lfg~~~~~~~~~--~~~p~~hPgr~a~I--~~--~g 247 (415)
T 3cmq_A 174 KDGESLQLFEQSSRSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVD--CYFPFTHPSFEMEI--NF--HG 247 (415)
T ss_dssp TTGGGCCSBCCCCCCSSCCTTBCHHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEEE--EEETTEEEEEEEEE--EE--TT
T ss_pred cccceEEEEEecCcccccccccccccccccHHHHHHHHHHHHHHHcCCCceEEEec--CCCCCCCCceEEEE--EE--CC
Confidence 1 123334456899999999999998 986 66542 22112233444444 33 35
Q ss_pred ceeeeeecCcchhhhHHH
Q psy10095 509 SWVTCMDLNAKVYIQIVF 526 (680)
Q Consensus 509 ~Y~EisS~Sn~~~~q~~~ 526 (680)
.|.|+.-| --. ++.++
T Consensus 248 ~wlE~lG~-G~l-hP~Vl 263 (415)
T 3cmq_A 248 EWLEVLGC-GVM-EQQLV 263 (415)
T ss_dssp EEEEEEEE-EEE-CHHHH
T ss_pred eeEEEEEE-EEe-CHHHH
Confidence 68887777 444 34344
No 68
>4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis}
Probab=88.72 E-value=0.89 Score=51.20 Aligned_cols=116 Identities=9% Similarity=-0.037 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhh
Q psy10095 313 KFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCA 392 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~ 392 (680)
++--++++ ++..++.++||.+|-||-|... .+|-.. ..|.... + .-+.++||.=+.+ .
T Consensus 205 r~Rs~i~~-~iR~ff~~~gFlEVeTPiL~~~----~gGA~a----~pF~t~~--n------~~~~~~yL~~Spq-L---- 262 (529)
T 4ex5_A 205 RARTKAIA-SIRKFMGDADFMEVETPMLHPI----PGGAAA----KPFVTHH--N------ALDMEMFLRIAPE-L---- 262 (529)
T ss_dssp HHHHHHHH-HHHHHHHHTTCEECCCCSEESS----CCSSSS----CCCEEEE--T------TTTEEEEECSCSH-H----
T ss_pred HHHHHHHH-HHHHHHHHCCCEEEeCCeeecc----CCCCcc----ccccccc--c------cCCcceecccCHH-H----
Confidence 33444444 4445566789999999999833 123111 1232211 0 0123577753333 2
Q ss_pred hhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEE-ecCChhHHHHHHHHHHHHH
Q psy10095 393 YHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFV-GTNNHENLCKEFQNIQSLL 469 (680)
Q Consensus 393 ~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~-~~~~pe~S~~~~eeml~~~ 469 (680)
|.+..+- ..+ =|+.-+|+|||.| ++ ++ -+.-.|+.+|.-. ++ +.++..++-|+|+..+
T Consensus 263 -ylk~L~v-~G~-~rVyeIg~~FR~E---------~~---~~---rH~pEFtmlE~e~af~-d~~dlm~l~E~li~~v 321 (529)
T 4ex5_A 263 -YLKRLIV-GGF-ERVFEINRNFRNE---------GV---SP---RHNPEFTMMEFYAAYT-DYRWLMDFTERLIRQA 321 (529)
T ss_dssp -HHHHHHH-TTC-SEEEEEEEEECCS---------CC---BT---TBCSEEEEEEEEEETC-CHHHHHHHHHHHHHHH
T ss_pred -HHHHHHh-cCC-CcEEEeehheecC---------CC---CC---CcccHhHhhhhhhhcC-CHHHHHHHHHHHHHHH
Confidence 2221111 111 3788889999997 33 22 4667899999988 55 7887777777777544
No 69
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=88.34 E-value=0.25 Score=30.82 Aligned_cols=22 Identities=36% Similarity=0.803 Sum_probs=20.2
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|..|++-|.+...|..|.++
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~~ 23 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQRV 23 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGGG
T ss_pred ccCCCCCCcCCCHHHHHHHHHH
Confidence 6799999999999999999865
No 70
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=87.85 E-value=0.23 Score=31.46 Aligned_cols=23 Identities=30% Similarity=0.623 Sum_probs=20.8
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|-|..|++.|.+..+|..|+++
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 37899999999999999999864
No 71
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=87.67 E-value=0.3 Score=33.14 Aligned_cols=25 Identities=28% Similarity=0.509 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|.++
T Consensus 9 ~k~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 9 IKPFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CCCccCCCCCcccCcHHHHHHHHHH
Confidence 3458999999999999999999864
No 72
>1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A*
Probab=87.47 E-value=2 Score=48.87 Aligned_cols=117 Identities=13% Similarity=0.108 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCce-eeccchhhhhh
Q psy10095 313 KFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNH-LVGSAHMSMFC 391 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~-LigTaeevpl~ 391 (680)
++--.+++.+- .++.++||.+|-||.|.++. -+|.+ + |.+.++. ...++| |- ++-+.
T Consensus 139 ~~Rs~i~~~iR-~fl~~~gFlEVeTPiL~~s~-~eGAr-------~-F~v~~~~--------~~~~~y~L~-qSPQl--- 196 (585)
T 1c0a_A 139 KTRAKITSLVR-RFMDDHGFLDIETPMLTKAT-PEGAR-------D-YLVPSRV--------HKGKFYALP-QSPQL--- 196 (585)
T ss_dssp HHHHHHHHHHH-HHHHHTTCEECCCCSSBCCC-SSSSC-------C-CEEECSS--------STTCEEECC-SCSHH---
T ss_pred HHHHHHHHHHH-HHHHhCCcEEEeCCEEecCC-CCCCc-------c-ceecccc--------cCCceEeCc-cCHHH---
Confidence 33444444444 45567899999999999753 33332 2 4433210 012344 54 23221
Q ss_pred hhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEE-ecCChhHHHHHHHHHHHHHH
Q psy10095 392 AYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFV-GTNNHENLCKEFQNIQSLLK 470 (680)
Q Consensus 392 ~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~-~~~~pe~S~~~~eeml~~~e 470 (680)
|... +-..-+ =||.-+++|||.| ++ ++ -|.-.|+.+|+-. ++ +.++..++.|+|+..+-
T Consensus 197 --~kq~-Lmv~G~-~rvfqI~~~FR~E---------~~---~t---~r~pEFT~lE~e~af~-d~~dvm~~~E~li~~i~ 256 (585)
T 1c0a_A 197 --FKQL-LMMSGF-DRYYQIVKCFRDE---------DL---RA---DRQPEFTQIDVETSFM-TAPQVREVMEALVRHLW 256 (585)
T ss_dssp --HHHH-HHHTTC-CEEEEEEEEECCC---------CC---BT---TBCSEEEEEEEEEESC-CHHHHHHHHHHHHHHHH
T ss_pred --HHHH-HHhcCC-CceEEEeceeecC---------CC---CC---CcCcccceeeeeecCC-CHHHHHHHHHHHHHHHH
Confidence 1111 111222 2788899999998 22 22 2556999999987 55 78887778888776554
Q ss_pred H
Q psy10095 471 S 471 (680)
Q Consensus 471 ~ 471 (680)
.
T Consensus 257 ~ 257 (585)
T 1c0a_A 257 L 257 (585)
T ss_dssp H
T ss_pred H
Confidence 3
No 73
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=87.16 E-value=0.29 Score=30.89 Aligned_cols=23 Identities=26% Similarity=0.777 Sum_probs=20.8
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|-|..|++-|.+...|..|.++
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHTT
T ss_pred CccCCCCCcccCCHHHHHHHHHh
Confidence 37899999999999999999864
No 74
>1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A*
Probab=87.06 E-value=1.5 Score=47.91 Aligned_cols=113 Identities=10% Similarity=0.046 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhh
Q psy10095 313 KFEYLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCA 392 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~ 392 (680)
++-..+++.+-+ ++.++||.+|-||.|... ..+|.+ +.|.+.. .+..+||- ++.+..+-.
T Consensus 126 ~~rs~i~~~ir~-~f~~~gF~EV~TPil~~~-~~e~~~-------~~f~~~~----------~g~~~~L~-~Spel~~~~ 185 (422)
T 1n9w_A 126 KVQAALVRGFRR-YLDRQDFTEIFTPKVVRA-GAEGGS-------GLFGVDY----------FEKRAYLA-QSPQLYKQI 185 (422)
T ss_dssp HHHHHHHHHHHH-HHHHTTCEECCCC-----------------------------------------------CHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHCCCEEEECCEEEEe-CCCCCc-------eeEEEee----------CCCcEEee-eCHHHHHHH
Confidence 444455555554 446689999999999865 223322 2343321 12346774 222222211
Q ss_pred hhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhh-hccceEEEEEecC-ChhHHHHHHHHHHHH
Q psy10095 393 YHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNS-IQREKVNLFVGTN-NHENLCKEFQNIQSL 468 (680)
Q Consensus 393 ~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~Rv-HQF~KVE~f~~~~-~pe~S~~~~eeml~~ 468 (680)
+ + .. +-|+..+|+|||.| ++. + -|- .+|+.+|.-..-. +.++..++-|+|+..
T Consensus 186 l-----~--~g-~~rvf~ig~~FR~E---------~~~---~---~RH~pEFtqle~e~~~~~d~~dlm~l~e~ll~~ 240 (422)
T 1n9w_A 186 M-----V--GV-FERVYEVAPVWRME---------EHH---T---SRHLNEYLSLDVEMGFIADEEDLMRLEEALLAE 240 (422)
T ss_dssp H-----H--HH-HSEEEEEEEC----------------------------CCEEEEEEEESCSSHHHHHHHHHHHHHH
T ss_pred H-----h--hC-CCceeEEeCceECC---------CCC---C---CcccceeEEeeeeeeCCCCHHHHHHHHHHHHHH
Confidence 1 1 11 36999999999997 221 1 022 3999999887543 555555555555543
No 75
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=86.92 E-value=0.29 Score=31.06 Aligned_cols=22 Identities=18% Similarity=0.449 Sum_probs=20.4
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|..|++-|.....|..|.++
T Consensus 4 ~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvg_A 4 YRCPLCRAGCPSLASMQAHMRG 25 (27)
T ss_dssp EEETTTTEEESCHHHHHHHHTT
T ss_pred cCCCCCCcccCCHHHHHHHHHh
Confidence 7899999999999999999864
No 76
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.90 E-value=0.37 Score=32.53 Aligned_cols=26 Identities=23% Similarity=0.461 Sum_probs=22.7
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++.|.....|..|+++
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 6 SGLLYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHTT
T ss_pred CCCCeECCCCCCccCCHHHHHHHHHH
Confidence 34468999999999999999999875
No 77
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=86.88 E-value=0.28 Score=30.90 Aligned_cols=23 Identities=35% Similarity=0.629 Sum_probs=20.7
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|-|..|++-|.+...|..|.++
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHHH
Confidence 37899999999999999999864
No 78
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=86.77 E-value=0.38 Score=32.14 Aligned_cols=26 Identities=23% Similarity=0.577 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++.|.....|..|.++
T Consensus 4 ~~k~~~C~~C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 4 GKRPFVCRICLSAFTTKANCARHLKV 29 (35)
T ss_dssp CCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred CCcCeeCCCCCcccCCHHHHHHHHHH
Confidence 34458999999999999999999864
No 79
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=86.74 E-value=0.22 Score=54.33 Aligned_cols=35 Identities=29% Similarity=0.442 Sum_probs=32.2
Q ss_pred ceeecccccc------cccChHHHHHhhccchhhhhhhhcc
Q psy10095 55 AQFYCLHCAR------HFIDEHALKEHFRTKVHKRRLKALE 89 (680)
Q Consensus 55 gq~yC~~C~r------~F~~~~~l~~H~k~K~HKrr~K~l~ 89 (680)
-+|+|-.|.+ .++.+..-..|.+||.|||+||..+
T Consensus 359 ~~~~Ce~C~~~~~~~~~~~ge~~W~~H~ksr~Hk~~~~~~~ 399 (409)
T 3eph_A 359 THYTCNVCRNADGKNVVAIGEKYWKIHLGSRRHKSNLKRNT 399 (409)
T ss_dssp CEEEEEEEECTTSCEEEEESHHHHHHHHTSHHHHHHHHHHH
T ss_pred cceeCCCCCCCCCCcceEEcHHHHHHHhhhhHHHHHHHHHH
Confidence 4589999999 8999999999999999999999774
No 80
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.61 E-value=0.34 Score=32.55 Aligned_cols=26 Identities=19% Similarity=0.396 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++.|.....|..|+++
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elt_A 6 SGKPYKCPQCSYASAIKANLNVHLRK 31 (36)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCCCCCCCCCcccCCHHHHHHHHHH
Confidence 34469999999999999999999864
No 81
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=86.50 E-value=0.3 Score=30.93 Aligned_cols=22 Identities=27% Similarity=0.656 Sum_probs=20.5
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|..|++.|.+...|..|.++
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHTG
T ss_pred ccCCCCCchhCCHHHHHHHHHH
Confidence 7899999999999999999875
No 82
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=86.31 E-value=0.33 Score=32.24 Aligned_cols=25 Identities=24% Similarity=0.704 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++-|.....|..|.++
T Consensus 5 ~k~~~C~~C~k~f~~~~~L~~H~~~ 29 (35)
T 2elx_A 5 SSGYVCALCLKKFVSSIRLRSHIRE 29 (35)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCeECCCCcchhCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 83
>4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens}
Probab=86.24 E-value=1.3 Score=50.86 Aligned_cols=113 Identities=12% Similarity=0.159 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHh-hCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhh
Q psy10095 313 KFEYLIPIILKDYFTV-KHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFC 391 (680)
Q Consensus 313 ~LE~ALi~y~ld~~~~-~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~ 391 (680)
++--++++. +..++. ++||.+|.||.|..+ +-+|++ .|.+..+ . .+..+||.=+.+
T Consensus 149 r~Rs~i~~~-iR~f~~~~~gF~EVeTPiL~~s-t~~GA~--------~F~v~~~-~-------~g~~~~L~qSpq----- 205 (617)
T 4ah6_A 149 RLRSQMVMK-MREYLCNLHGFVDIETPTLFKR-TPGGAK--------EFLVPSR-E-------PGKFYSLPQSPQ----- 205 (617)
T ss_dssp HHHHHHHHH-HHHHHHTTSCCEECCCCSSBCC-CCSSSC--------CCEEECS-S-------TTCEEECCSSTT-----
T ss_pred HHHHHHHHH-HHHHHHhcCCeEEEeCCeeccC-CCCCCc--------Cceeccc-c-------CCcccccccCHH-----
Confidence 344444444 445553 579999999999974 333332 1444321 0 122345542222
Q ss_pred hhhcccccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEE-ecCChhHHHHHHHHHHH
Q psy10095 392 AYHTNHSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFV-GTNNHENLCKEFQNIQS 467 (680)
Q Consensus 392 ~~~~~e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~-~~~~pe~S~~~~eeml~ 467 (680)
+|....+ ..-+ =||.-+++|||.| + .+++ |.-.|+.+|+-. ++ +.++..++.|+|+.
T Consensus 206 -l~kq~l~-v~g~-~rvfqi~~~FR~E---------~---~~t~---r~pEFt~lE~e~af~-d~~d~m~~~E~l~~ 263 (617)
T 4ah6_A 206 -QFKQLLM-VGGL-DRYFQVARCYRDE---------G---SRPD---RQPEFTQIDIEMSFV-DQTGIQSLIEGLLQ 263 (617)
T ss_dssp -HHHHHHH-HTSC-SEEEEEEEEECCC---------S---SCSS---SCSEEEEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred -HHHHHHH-hccc-CcEEEEEhheecc---------c---CCCC---cCcceecceeeecCC-CHHHHHHHHHHHHH
Confidence 1111111 1112 2778888888887 2 2222 467999999987 55 66655555555553
No 84
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.21 E-value=0.36 Score=32.59 Aligned_cols=26 Identities=23% Similarity=0.409 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++.|.+...|..|.++
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 6 SGKPFKCSLCEYATRSKSNLKAHMNR 31 (36)
T ss_dssp CCCSEECSSSSCEESCHHHHHHHHHH
T ss_pred CCCCccCCCCCchhCCHHHHHHHHHH
Confidence 34568999999999999999999864
No 85
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=86.17 E-value=0.31 Score=30.76 Aligned_cols=22 Identities=41% Similarity=0.919 Sum_probs=20.5
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|..|++-|.+...|..|.++
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 3 FVCEVCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHHH
Confidence 7899999999999999999875
No 86
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.48 E-value=0.4 Score=32.13 Aligned_cols=26 Identities=23% Similarity=0.424 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++-|.+...|..|+++
T Consensus 6 ~~~~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elr_A 6 SGKTHLCDMCGKKFKSKGTLKSHKLL 31 (36)
T ss_dssp CCSSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCCCeecCcCCCCcCchHHHHHHHHH
Confidence 44568999999999999999999864
No 87
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.25 E-value=0.41 Score=32.83 Aligned_cols=24 Identities=29% Similarity=0.683 Sum_probs=21.3
Q ss_pred CceeecccccccccChHHHHHh-hc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEH-FR 77 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H-~k 77 (680)
.-.|-|..|++.|.+...|..| .+
T Consensus 7 ~k~~~C~~C~k~f~~~~~L~~H~~~ 31 (37)
T 2elm_A 7 GHLYYCSQCHYSSITKNCLKRHVIQ 31 (37)
T ss_dssp SCEEECSSSSCEEECHHHHHHHHHH
T ss_pred CcCeECCCCCcccCCHHHHHHHHHH
Confidence 3459999999999999999999 64
No 88
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.63 E-value=0.42 Score=32.35 Aligned_cols=25 Identities=24% Similarity=0.688 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++-|.....|..|.++
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~~H~~~ 31 (37)
T 2elo_A 7 GRSYSCPVCEKSFSEDRLIKSHIKT 31 (37)
T ss_dssp CCCCEETTTTEECSSHHHHHHHHHH
T ss_pred CCCcCCCCCCCccCCHHHHHHHHHH
Confidence 3458999999999999999999875
No 89
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=84.96 E-value=0.19 Score=31.45 Aligned_cols=23 Identities=26% Similarity=0.798 Sum_probs=20.6
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|-|..|++-|.+...|..|.++
T Consensus 2 p~~C~~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 2 PYVCERCGKRFVQSSQLANHIRH 24 (26)
Confidence 37899999999999999999864
No 90
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.37 E-value=0.5 Score=31.83 Aligned_cols=25 Identities=32% Similarity=0.623 Sum_probs=22.2
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2els_A 7 GKIFTCEYCNKVFKFKHSLQAHLRI 31 (36)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCCEECCCCCceeCCHHHHHHHHHH
Confidence 3458999999999999999999874
No 91
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=84.33 E-value=0.5 Score=29.71 Aligned_cols=23 Identities=30% Similarity=0.715 Sum_probs=20.8
Q ss_pred eeecc--cccccccChHHHHHhhcc
Q psy10095 56 QFYCL--HCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~--~C~r~F~~~~~l~~H~k~ 78 (680)
.|-|. .|++.|.+...|..|+++
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHH
Confidence 37899 999999999999999875
No 92
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=84.30 E-value=0.35 Score=36.05 Aligned_cols=28 Identities=25% Similarity=0.581 Sum_probs=24.1
Q ss_pred ceeecccccccccChHHHHHhhccchhh
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRTKVHK 82 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~K~HK 82 (680)
..|.|..|++.|.+...|..|+++..+.
T Consensus 28 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 55 (57)
T 1bbo_A 28 RPYHCTYCNFSFKTKGNLTKHMKSKAHS 55 (57)
T ss_dssp CCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred CCccCCCCCchhcCHHHHHHHHHHhccc
Confidence 4589999999999999999999876554
No 93
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=83.78 E-value=0.52 Score=32.50 Aligned_cols=25 Identities=28% Similarity=0.620 Sum_probs=21.9
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++-|.+...|..|.++
T Consensus 4 ~k~~~C~~C~k~f~~~~~L~~H~~~ 28 (39)
T 1njq_A 4 PRSYTCSFCKREFRSAQALGGHMNV 28 (39)
T ss_dssp SSSEECTTTCCEESSHHHHHHHHHT
T ss_pred CCceECCCCCcccCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 94
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=83.75 E-value=0.58 Score=32.65 Aligned_cols=25 Identities=32% Similarity=0.630 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~~~ 32 (42)
T 2el5_A 8 ENPYECSECGKAFNRKDQLISHQRT 32 (42)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHGG
T ss_pred CCCccCCCcChhhCCHHHHHHHHHh
Confidence 3458999999999999999999864
No 95
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.44 E-value=0.49 Score=32.10 Aligned_cols=24 Identities=21% Similarity=0.470 Sum_probs=21.4
Q ss_pred ceeecccccccccCh-HHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDE-HALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~-~~l~~H~k~ 78 (680)
-.|-|..|++.|... ..|..|.++
T Consensus 8 k~~~C~~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 8 RAMKCPYCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CCEECSSSSCEECSSCHHHHHHHHH
T ss_pred CCeECCCCChhhccCHHHHHHHHHh
Confidence 458999999999999 999999864
No 96
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=83.36 E-value=0.46 Score=31.87 Aligned_cols=22 Identities=27% Similarity=0.747 Sum_probs=20.2
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|..|++-|.+...|..|+++
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~~~ 24 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHITL 24 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHHHH
Confidence 6799999999999999999864
No 97
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=83.85 E-value=0.23 Score=31.69 Aligned_cols=22 Identities=27% Similarity=0.671 Sum_probs=20.3
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|..|++.|.+..+|..|.++
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSLIAHVRQ 24 (29)
Confidence 7899999999999999999864
No 98
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=83.18 E-value=0.38 Score=30.10 Aligned_cols=22 Identities=32% Similarity=0.702 Sum_probs=20.1
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|.+|++-|.....|..|.++
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 2m0e_A 3 HKCPHCDKKFNQVGNLKAHLKI 24 (29)
T ss_dssp CCCSSCCCCCCTTTHHHHHHHH
T ss_pred CcCCCCCcccCCHHHHHHHHHH
Confidence 6799999999999999999864
No 99
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=83.09 E-value=0.55 Score=33.72 Aligned_cols=24 Identities=33% Similarity=0.646 Sum_probs=21.5
Q ss_pred CCceeecccccccccChHHHHHhh
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHF 76 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~ 76 (680)
|--.|.|.+|+|.|....+|..|+
T Consensus 5 gekp~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 5 KPARFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp SCCCCEETTTTEECSCHHHHHHHH
T ss_pred CccCeECCCCCCccCCHhHccCcC
Confidence 344599999999999999999998
No 100
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.07 E-value=0.71 Score=32.08 Aligned_cols=26 Identities=27% Similarity=0.607 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++-|.....|..|.++
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 32 (41)
T 2ept_A 7 GQRVYECQECGKSFRQKGSLTLHERI 32 (41)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHGGG
T ss_pred CCCCeECCCCCCCcCCHHHHHHHHHH
Confidence 34458999999999999999999864
No 101
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.91 E-value=0.55 Score=33.04 Aligned_cols=26 Identities=35% Similarity=0.645 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eof_A 9 GEKPYECNECQKAFNTKSNLMVHQRT 34 (44)
T ss_dssp CCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred CCCCeECCCCCcccCCHhHHHHHHHH
Confidence 34559999999999999999999864
No 102
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=82.86 E-value=0.58 Score=32.55 Aligned_cols=26 Identities=31% Similarity=0.733 Sum_probs=22.4
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 8 ~~~~~~C~~C~k~f~~~~~l~~H~~~ 33 (42)
T 2epc_A 8 GETPYLCGQCGKSFTQRGSLAVHQRS 33 (42)
T ss_dssp SSCCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCCeECCCCCcccCCHHHHHHHhhh
Confidence 34458999999999999999999864
No 103
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.73 E-value=0.66 Score=32.44 Aligned_cols=25 Identities=32% Similarity=0.632 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|.++
T Consensus 9 ~k~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2eos_A 9 EKPYPCEICGTRFRHLQTLKSHLRI 33 (42)
T ss_dssp SCCBCCSSSCCCBSSHHHHHHHTTT
T ss_pred CCCEECCCCCCccCCHHHHHHHHHh
Confidence 3458999999999999999999874
No 104
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.67 E-value=0.59 Score=33.14 Aligned_cols=26 Identities=35% Similarity=0.761 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 32 (43)
T 2yrm_A 7 GNGAFFCNECDCRFSEEASLKRHTLQ 32 (43)
T ss_dssp SSCCBCCSSSCCCBSSHHHHHHHHHH
T ss_pred CCCCEECCCCCCeeCChHHHHHHHHh
Confidence 34458999999999999999999864
No 105
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.66 E-value=0.59 Score=32.52 Aligned_cols=26 Identities=31% Similarity=0.695 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|.++
T Consensus 8 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2ytb_A 8 GEKPYRCDQCGKAFSQKGSLIVHIRV 33 (42)
T ss_dssp SCCSBCCTTTTCCBSSHHHHHTTGGG
T ss_pred CCCCeeCCCccchhCCHHHHHHHHHH
Confidence 34458999999999999999999864
No 106
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=82.59 E-value=0.45 Score=30.02 Aligned_cols=22 Identities=32% Similarity=0.608 Sum_probs=20.3
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|-.|++-|.+...|..|.++
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIKT 24 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHHH
T ss_pred ccCCCCCCccCCHHHHHHHHHH
Confidence 6799999999999999999864
No 107
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.28 E-value=0.61 Score=32.55 Aligned_cols=26 Identities=27% Similarity=0.648 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 8 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2en2_A 8 GEKPYKCETCGARFVQVAHLRAHVLI 33 (42)
T ss_dssp SSCSEECTTTCCEESSHHHHHHHTHH
T ss_pred CCCCEeCCCcChhhCCHHHHHHHHHH
Confidence 34459999999999999999999863
No 108
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=82.25 E-value=0.55 Score=29.87 Aligned_cols=21 Identities=29% Similarity=0.593 Sum_probs=19.2
Q ss_pred eecccccccccChHHHHHh-hc
Q psy10095 57 FYCLHCARHFIDEHALKEH-FR 77 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H-~k 77 (680)
|-|..|++-|.+...|..| .+
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (30)
T 1paa_A 3 YACGLCNRAFTRRDLLIRHAQK 24 (30)
T ss_dssp SBCTTTCCBCSSSHHHHHHHTT
T ss_pred cCCcccCcccCChHHHHHHHHH
Confidence 6799999999999999999 54
No 109
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.14 E-value=0.79 Score=32.55 Aligned_cols=26 Identities=38% Similarity=0.638 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++.|.....|..|.++
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2epv_A 9 GEKPYECNECGKAFIWKSLLIVHERT 34 (44)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHGG
T ss_pred CCcCeECCCCCcccCchHHHHHHHhH
Confidence 34468999999999999999999864
No 110
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=82.12 E-value=0.77 Score=32.68 Aligned_cols=26 Identities=31% Similarity=0.561 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2el4_A 9 GVKPYGCSQCAKTFSLKSQLIVHQRS 34 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHGGG
T ss_pred CCCceECCCCCchhCCHHHHHHHHHH
Confidence 34459999999999999999999865
No 111
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.92 E-value=0.77 Score=32.77 Aligned_cols=25 Identities=32% Similarity=0.712 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emi_A 10 ERHYECSECGKAFIQKSTLSMHQRI 34 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHGG
T ss_pred CCCCCCCCCCcccCCHHHHHHHHhH
Confidence 3459999999999999999999875
No 112
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.68 E-value=0.74 Score=32.94 Aligned_cols=26 Identities=27% Similarity=0.516 Sum_probs=22.8
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+..+|..|+++
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em5_A 9 STKSHQCHECGRGFTLKSHLNQHQRI 34 (46)
T ss_dssp CSCSEECSSSCCEESSHHHHHHHHTT
T ss_pred CCCCeECCcCCCccCCHHHHHHHHHH
Confidence 34569999999999999999999865
No 113
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.63 E-value=0.71 Score=32.97 Aligned_cols=26 Identities=31% Similarity=0.649 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emg_A 9 GENPFICSECGKVFTHKTNLIIHQKI 34 (46)
T ss_dssp SCCSCBCTTTCCBCSSHHHHHHHHTT
T ss_pred CCCCEECCccCcccCCHHHHHHHHHH
Confidence 33458999999999999999999864
No 114
>2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A*
Probab=81.55 E-value=2.6 Score=47.55 Aligned_cols=95 Identities=8% Similarity=0.173 Sum_probs=64.2
Q ss_pred CCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCCc-e
Q psy10095 402 KDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNMK-Y 480 (680)
Q Consensus 402 ~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~Lp-y 480 (680)
...|+|++.+|+|||++. . ...+ +..||..++.+.+- ... -|.++...++.+++.||+. +
T Consensus 202 ~~~pvrLFEIG~VFr~d~--------~----~d~t--h~~Ef~qLagli~G-~~v----df~dLKgilE~LL~~LGi~~~ 262 (534)
T 2du3_A 202 LPLPIKLFSIDRCFRREQ--------G----EDAT--RLYTYFSASCVLVD-EEL----SVDDGKAVAEALLRQFGFENF 262 (534)
T ss_dssp SCSSEEEEEEEEEECCCT--------T----CSSS--CCSEEEEEEEEEEC-SSC----CHHHHHHHHHHHHGGGTCCEE
T ss_pred CCCCeeEEEEeeEEecCc--------c----cccc--ccceeeEEEEEEEC-CCC----CHHHHHHHHHHHHHHcCCCeE
Confidence 478999999999999851 1 0111 23699999998865 321 2567999999999999995 7
Q ss_pred EEeecCCCCC--CcccccceeeeeeecCC--------CceeeeeecC
Q psy10095 481 RICKAPADVL--HTSESHRLEYQVYSYSL--------NSWVTCMDLN 517 (680)
Q Consensus 481 RVv~m~tgdL--g~~a~kkyDIEvW~P~~--------~~Y~EisS~S 517 (680)
|+.. +.+- .+-..+...|.+|.|+. +.|.||.-|-
T Consensus 263 r~~~--~~~~~~~yhPgt~aeI~v~~~~~~g~~~~~~~gW~eIG~~G 307 (534)
T 2du3_A 263 RFRK--DEKRSKYYIPDTQTEVFAFHPKLVGSSTKYSDGWIEIATFG 307 (534)
T ss_dssp EEEE--CTTCCTTBCTTTCEEEEEEEEEEETCSSSCTEEEEEEEEEE
T ss_pred EEEE--CCCCcccccCCeEEEEEEEeccccccccccCCCCEEEEEEE
Confidence 7663 3221 13335557777776642 4578887765
No 115
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.48 E-value=0.84 Score=32.63 Aligned_cols=25 Identities=24% Similarity=0.589 Sum_probs=22.2
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emf_A 10 GKHFECTECGKAFTRKSTLSMHQKI 34 (46)
T ss_dssp SCCEECSSSCCEESCHHHHHHHGGG
T ss_pred CCCeECCCCCchhCCHHHHHHHHHH
Confidence 3458999999999999999999874
No 116
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=82.24 E-value=0.3 Score=31.10 Aligned_cols=23 Identities=43% Similarity=0.996 Sum_probs=20.8
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|-|..|++.|.+..+|..|.++
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRI 25 (30)
Confidence 37899999999999999999874
No 117
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.29 E-value=0.75 Score=33.00 Aligned_cols=25 Identities=24% Similarity=0.513 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|.++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eon_A 10 EKPYKCQVCGKAFRVSSHLVQHHSV 34 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHTTT
T ss_pred CcccCCCCCCcccCcHHHHHHHHHh
Confidence 3458999999999999999999864
No 118
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.20 E-value=0.86 Score=32.51 Aligned_cols=25 Identities=28% Similarity=0.572 Sum_probs=22.2
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em7_A 10 EKPYKCEECGKGFICRRDLYTHHMV 34 (46)
T ss_dssp CCSEECSSSCCEESCHHHHHHHGGG
T ss_pred CcCccCCCccchhCCHHHHHHHHHH
Confidence 3458999999999999999999865
No 119
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.10 E-value=0.76 Score=32.71 Aligned_cols=26 Identities=35% Similarity=0.754 Sum_probs=22.7
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep1_A 9 GEKPYECSDCGKSFIKKSQLHVHQRI 34 (46)
T ss_dssp SCCSSCCSSSCCCCSSHHHHHHHHGG
T ss_pred CCCCcCCCCCCchhCCHHHHHHHHHH
Confidence 34458999999999999999999875
No 120
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.01 E-value=0.72 Score=32.50 Aligned_cols=24 Identities=25% Similarity=0.589 Sum_probs=21.7
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|..|++.|.....|..|+++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eoj_A 11 NPYECCECGKVFSRKDQLVSHQKT 34 (44)
T ss_dssp CSCEETTTTEECSSHHHHHHHHTT
T ss_pred cCeeCCCCCCccCCHHHHHHHHHH
Confidence 458999999999999999999865
No 121
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.99 E-value=0.73 Score=32.39 Aligned_cols=25 Identities=28% Similarity=0.511 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++-|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2en7_A 10 MKPYVCNECGKAFRSKSYLIIHTRT 34 (44)
T ss_dssp SSSSCCTTTCCCCSSHHHHHHHHTT
T ss_pred CcCeECCCCCCccCCHHHHHHHhhh
Confidence 3458999999999999999999864
No 122
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.99 E-value=0.88 Score=32.12 Aligned_cols=25 Identities=24% Similarity=0.493 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|.++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2emb_A 10 RKRYECSKCQATFNLRKHLIQHQKT 34 (44)
T ss_dssp CSSEECTTTCCEESCHHHHHHHGGG
T ss_pred CCCeECCCCCCccCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 123
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.97 E-value=0.7 Score=32.12 Aligned_cols=24 Identities=25% Similarity=0.631 Sum_probs=21.5
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|..|++.|.+...|..|.++
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H~~~ 32 (42)
T 2yte_A 9 KPYSCAECKETFSDNNRLVQHQKM 32 (42)
T ss_dssp CSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCeECCCCCCccCCHHHHHHHHHH
Confidence 458899999999999999999864
No 124
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.96 E-value=0.83 Score=32.48 Aligned_cols=26 Identities=31% Similarity=0.703 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++.|.+...|..|+++
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yrj_A 9 GEKPYRCGECGKAFAQKANLTQHQRI 34 (46)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHTT
T ss_pred CCCCeECCCCCCccCCHHHHHHHHHH
Confidence 34459999999999999999999864
No 125
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.82 E-value=0.95 Score=32.34 Aligned_cols=26 Identities=23% Similarity=0.461 Sum_probs=22.7
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2elz_A 9 VEKPYKCEDCGKGYNRRLNLDMHQRV 34 (46)
T ss_dssp CCSSCBCSSSCCBCSSHHHHHHHGGG
T ss_pred CCCCeeCcccCchhCCHHHHHHHHHh
Confidence 34558999999999999999999874
No 126
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=80.80 E-value=0.78 Score=29.72 Aligned_cols=22 Identities=36% Similarity=0.797 Sum_probs=20.0
Q ss_pred eecc--cccccccChHHHHHhhcc
Q psy10095 57 FYCL--HCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~--~C~r~F~~~~~l~~H~k~ 78 (680)
|-|. .|++.|.+...|..|+++
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred cCCcCCCCCcccCCHhHHHHHHHH
Confidence 6787 999999999999999875
No 127
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.79 E-value=0.74 Score=32.95 Aligned_cols=26 Identities=31% Similarity=0.657 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2en9_A 9 GKKLFKCNECKKTFTQSSSLTVHQRI 34 (46)
T ss_dssp SSCCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCCCEECCccCcccCCHHHHHHHHHH
Confidence 34458999999999999999999864
No 128
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.69 E-value=0.92 Score=32.42 Aligned_cols=25 Identities=32% Similarity=0.704 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yth_A 10 EKPFQCEECGKRFTQNSHLHSHQRV 34 (46)
T ss_dssp SSSBCCSSSCCCBSSHHHHHHHGGG
T ss_pred CcCCCCCCCCcccCCHHHHHHHHHh
Confidence 3458999999999999999999864
No 129
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=80.65 E-value=0.9 Score=32.39 Aligned_cols=26 Identities=27% Similarity=0.675 Sum_probs=22.7
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ema_A 9 GEKRYKCNECGKVFSRNSQLSQHQKI 34 (46)
T ss_dssp TSCCEECSSSCCEESSHHHHHHHHTG
T ss_pred CCcCcCCCCCcchhCCHHHHHHHHHh
Confidence 34459999999999999999999875
No 130
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.64 E-value=0.78 Score=32.65 Aligned_cols=26 Identities=31% Similarity=0.606 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eow_A 9 GEKPYKCNECGKAFRARSSLAIHQAT 34 (46)
T ss_dssp CCCCEECTTSCCEESSHHHHHHHHHH
T ss_pred CCCCeeccccCChhcCHHHHHHHHHH
Confidence 34458999999999999999999864
No 131
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=80.62 E-value=0.75 Score=32.90 Aligned_cols=25 Identities=32% Similarity=0.597 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emj_A 10 EKPFECAECGKSFSISSQLATHQRI 34 (46)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCEECCCCCcccCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 132
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.54 E-value=0.84 Score=32.56 Aligned_cols=25 Identities=24% Similarity=0.565 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq2_A 10 GKPYQCNECGKAFSQTSKLARHQRV 34 (46)
T ss_dssp SCSSSCCSSCCCCSSHHHHHHHGGG
T ss_pred CCCeECCCCCcccCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 133
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.52 E-value=0.8 Score=32.58 Aligned_cols=25 Identities=36% Similarity=0.611 Sum_probs=22.2
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytf_A 10 EKPFECSECQKAFNTKSNLIVHQRT 34 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHT
T ss_pred CCCcCCCCCCcccCCHHHHHHHHHH
Confidence 3459999999999999999999865
No 134
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.48 E-value=0.79 Score=32.80 Aligned_cols=25 Identities=32% Similarity=0.551 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+..+|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoy_A 10 EKCFKCNKCEKTFSCSKYLTQHERI 34 (46)
T ss_dssp SCCEECSSSCCEESSSHHHHHHHTT
T ss_pred CCCEECcCCCCcCCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 135
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.36 E-value=0.77 Score=32.67 Aligned_cols=25 Identities=36% Similarity=0.800 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++-|.+...|..|+++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eor_A 10 EKPYNCEECGKAFIHDSQLQEHQRI 34 (46)
T ss_dssp CCSEECTTTCCEESSHHHHHHHHHH
T ss_pred CcCccCCCCCCCcCCHHHHHHHHHh
Confidence 3458999999999999999999864
No 136
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.34 E-value=0.75 Score=32.72 Aligned_cols=25 Identities=24% Similarity=0.554 Sum_probs=21.8
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|+++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eov_A 10 EKPYKCSDCGKSFTWKSRLRIHQKC 34 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred CCCccCCccChhhCCHHHHHHHHHh
Confidence 3458999999999999999999764
No 137
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.27 E-value=0.95 Score=32.26 Aligned_cols=25 Identities=20% Similarity=0.502 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2ytn_A 10 KKPYKCNECGKVFTQNSHLARHRGI 34 (46)
T ss_dssp CSSCBCTTTCCBCSSHHHHHHHGGG
T ss_pred CcCeECCCCCCeeCCHHHHHHHhhh
Confidence 3458999999999999999999864
No 138
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.18 E-value=0.86 Score=32.50 Aligned_cols=26 Identities=27% Similarity=0.570 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq1_A 9 GEKPYKCNECGKAFRAHSNLTTHQVI 34 (46)
T ss_dssp CSCCCCCTTTTCCCSSHHHHHHHHTT
T ss_pred CCCCeECCcCChhhCCHHHHHHHHHH
Confidence 34568999999999999999999864
No 139
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.18 E-value=0.96 Score=32.14 Aligned_cols=25 Identities=32% Similarity=0.733 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yts_A 10 EKPYICNECGKSFIQKSHLNRHRRI 34 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHGGG
T ss_pred CcCEECCCCChhhCChHHHHHHHHh
Confidence 3458999999999999999999864
No 140
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.17 E-value=0.82 Score=32.61 Aligned_cols=26 Identities=23% Similarity=0.608 Sum_probs=22.7
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ysp_A 9 GEKPYKCEKCGKGYNSKFNLDMHQKV 34 (46)
T ss_dssp SCCSEEETTTTEEESCHHHHHHHHTT
T ss_pred CCCCeECCCCCCccCCHHHHHHHHHh
Confidence 34559999999999999999999875
No 141
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=80.16 E-value=0.94 Score=32.36 Aligned_cols=26 Identities=27% Similarity=0.556 Sum_probs=22.7
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++.|.+..+|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2el6_A 9 GVNPYKCSQCEKSFSGKLRLLVHQRM 34 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHHGG
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHH
Confidence 34559999999999999999999875
No 142
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=80.13 E-value=0.87 Score=35.99 Aligned_cols=31 Identities=16% Similarity=0.304 Sum_probs=24.5
Q ss_pred CCCCCCCceeecccccccccChHHHHHhhcc
Q psy10095 48 DFDKPGEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 48 d~dlpG~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
....+|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~ 39 (74)
T 2lce_A 9 SHMTHSDKPYKCDRCQASFRYKGNLASHKTV 39 (74)
T ss_dssp --CCCCCCSBCCTTSSCCBSCHHHHHHHHHH
T ss_pred ccccCCCCCeECCCCCceeCCHHHHHHHHHH
Confidence 3445677789999999999999999999864
No 143
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=80.12 E-value=0.99 Score=32.07 Aligned_cols=25 Identities=28% Similarity=0.559 Sum_probs=22.2
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|.++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em9_A 10 EKPYNCKECGKSFRWASCLLKHQRV 34 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHGGG
T ss_pred CcCeECCccccccCChHHHHHHHHH
Confidence 3458999999999999999999865
No 144
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.10 E-value=0.89 Score=32.40 Aligned_cols=25 Identities=28% Similarity=0.640 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep3_A 10 EKPYRCAECGKAFTDRSNLFTHQKI 34 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHTT
T ss_pred CCCeECCCCCchhCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 145
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.02 E-value=0.96 Score=32.14 Aligned_cols=25 Identities=28% Similarity=0.458 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|.++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eme_A 10 EKPYVCDYCGKAFGLSAELVRHQRI 34 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHGG
T ss_pred CCCeECCCCChhhCCHHHHHHHHHh
Confidence 3459999999999999999999864
No 146
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.99 E-value=0.87 Score=32.55 Aligned_cols=25 Identities=28% Similarity=0.586 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.....|..|+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2enh_A 10 EKPYECDVCRKAFSHHASLTQHQRV 34 (46)
T ss_dssp SSSCBCTTTCCBCSSSHHHHHHGGG
T ss_pred CCCcCCCCcCchhCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 147
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.98 E-value=0.89 Score=32.33 Aligned_cols=25 Identities=28% Similarity=0.442 Sum_probs=22.2
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+..+|..|+++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eop_A 10 EKPHECRECGKSFSFNSQLIVHQRI 34 (46)
T ss_dssp CCSCBCTTTCCBCSSHHHHHHHHTT
T ss_pred CCCeeCCCCCchhCCHHHHHHHHHH
Confidence 3458999999999999999999875
No 148
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.95 E-value=0.83 Score=32.24 Aligned_cols=26 Identities=35% Similarity=0.590 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++-|.+..+|..|+++
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 32 (44)
T 2emx_A 7 GEKPFGCSCCEKAFSSKSYLLVHQQT 32 (44)
T ss_dssp SCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred CCcCccCCCCCcccCCHHHHHHHHHH
Confidence 33458999999999999999999864
No 149
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.88 E-value=0.81 Score=32.65 Aligned_cols=25 Identities=24% Similarity=0.575 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytj_A 10 EKPYICAECGKAFTIRSNLIKHQKI 34 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHH
T ss_pred CcCeECCCCChhhCCHHHHHHHHHH
Confidence 3459999999999999999999864
No 150
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.88 E-value=0.95 Score=32.34 Aligned_cols=24 Identities=25% Similarity=0.578 Sum_probs=21.7
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|..|++.|.+...|..|+++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2ytp_A 11 RHYECSECGKAFARKSTLIMHQRI 34 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHTT
T ss_pred CCeECCcCCcccCCHHHHHHHHHH
Confidence 458999999999999999999874
No 151
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.80 E-value=0.92 Score=32.34 Aligned_cols=26 Identities=31% Similarity=0.551 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.....|..|+++
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep0_A 9 GEKPYKCDVCHKSFRYGSSLTVHQRI 34 (46)
T ss_dssp TCCSEECSSSCCEESSHHHHHHHHTT
T ss_pred CCCCeeCcccCcccCChHHHHHHHHH
Confidence 34558999999999999999999864
No 152
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.78 E-value=0.92 Score=32.34 Aligned_cols=25 Identities=24% Similarity=0.517 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.....|..|+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2enf_A 10 EKPYKCNECGKVFTQNSHLVRHRGI 34 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHHTT
T ss_pred CcCeECCCCCcccCCHHHHHHHHHh
Confidence 3458999999999999999999864
No 153
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.70 E-value=0.85 Score=32.61 Aligned_cols=25 Identities=24% Similarity=0.624 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.....|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em4_A 10 QRPYECIECGKAFKTKSSLICHRRS 34 (46)
T ss_dssp SSSEECSSSCCEESSHHHHHHHHHH
T ss_pred CcCcCCCCCCCccCCHHHHHHHHHh
Confidence 3458999999999999999999864
No 154
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.68 E-value=0.81 Score=32.40 Aligned_cols=25 Identities=24% Similarity=0.400 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++-|.+...|..|+++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eou_A 10 KTTSECQECGKIFRHSSLLIEHQAL 34 (44)
T ss_dssp SCCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred CcCeECCCCCcccCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 155
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.55 E-value=0.96 Score=32.23 Aligned_cols=26 Identities=31% Similarity=0.638 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ene_A 9 GEKPYKCNECGKVFRHNSYLSRHQRI 34 (46)
T ss_dssp CSSSEECSSSCCEESSHHHHHHHHTT
T ss_pred CCCCeECCCCCchhCChHHHHHHHhh
Confidence 33459999999999999999999875
No 156
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.52 E-value=1 Score=32.14 Aligned_cols=26 Identities=31% Similarity=0.658 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+..+|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eml_A 9 GEKPYECSVCGKAFSHRQSLSVHQRI 34 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHHGG
T ss_pred CCCCeeCCCcCCccCCHHHHHHHHHH
Confidence 33458999999999999999999864
No 157
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.50 E-value=0.92 Score=32.43 Aligned_cols=26 Identities=35% Similarity=0.737 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em2_A 9 GEKPFKCKECGKAFRQNIHLASHLRI 34 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCCEECCcCCchhCCHHHHHHHHHH
Confidence 34569999999999999999999864
No 158
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.47 E-value=0.9 Score=32.48 Aligned_cols=26 Identities=31% Similarity=0.678 Sum_probs=22.7
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++-|.+..+|..|.++
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoo_A 9 GERPYGCNECGKNFGRHSHLIEHLKR 34 (46)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCCEEccccCcccCCHHHHHHHHHH
Confidence 34559999999999999999999865
No 159
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.43 E-value=0.81 Score=32.80 Aligned_cols=25 Identities=24% Similarity=0.576 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++-|.....|..|+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eom_A 10 ERGHRCSDCGKFFLQASNFIQHRRI 34 (46)
T ss_dssp CSSCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CCCcCCCCCCCeeCChHHHHHHHHH
Confidence 3458999999999999999999864
No 160
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.40 E-value=0.89 Score=32.41 Aligned_cols=26 Identities=35% Similarity=0.672 Sum_probs=22.7
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++.|.+...|..|.++
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emy_A 9 GENPYECHECGKAFSRKYQLISHQRT 34 (46)
T ss_dssp SSCCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCcCcCCCCCCcccCcHHHHHHHHHH
Confidence 34459999999999999999999875
No 161
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=79.39 E-value=1.1 Score=32.51 Aligned_cols=26 Identities=27% Similarity=0.387 Sum_probs=22.9
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
+...|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (48)
T 2epr_A 9 TRKQVACEICGKIFRDVYHLNRHKLS 34 (48)
T ss_dssp CCCSEEETTTTEEESSHHHHHHHGGG
T ss_pred CCcCeeCCCCCcccCCHHHHHHHHHh
Confidence 44569999999999999999999864
No 162
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=79.34 E-value=0.86 Score=29.63 Aligned_cols=22 Identities=27% Similarity=0.727 Sum_probs=20.3
Q ss_pred eecc--cccccccChHHHHHhhcc
Q psy10095 57 FYCL--HCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~--~C~r~F~~~~~l~~H~k~ 78 (680)
|-|. .|++-|.+...|..|+++
T Consensus 4 ~~C~~~~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 4 YSCDHPGCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp BCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred CcCcCCCCCCccCCHHHHHHHHHH
Confidence 6798 899999999999999875
No 163
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.29 E-value=0.89 Score=32.33 Aligned_cols=25 Identities=28% Similarity=0.567 Sum_probs=21.9
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq4_A 10 EKLYNCKECGKSFSRAPCLLKHERL 34 (46)
T ss_dssp CCCCCBTTTTBCCSCHHHHHHHHHH
T ss_pred CCCeECCCCCCccCchHHHHHHHHh
Confidence 3458999999999999999999864
No 164
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=79.22 E-value=1.1 Score=31.98 Aligned_cols=25 Identities=24% Similarity=0.497 Sum_probs=22.2
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2em0_A 10 EKTWKCRECDMCFSQASSLRLHQNV 34 (46)
T ss_dssp CCCCCCSSSCCCCSSHHHHHHHGGG
T ss_pred CcCeECCCCCcccCCHHHHHHHHHH
Confidence 3458999999999999999999875
No 165
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.18 E-value=1 Score=32.18 Aligned_cols=25 Identities=28% Similarity=0.577 Sum_probs=21.9
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.....|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em6_A 10 EKCYKCDVCGKEFSQSSHLQTHQRV 34 (46)
T ss_dssp CCCCBCSSSCCBCSSHHHHHHHHTT
T ss_pred CCCeECCCCCcccCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 166
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.92 E-value=1 Score=32.12 Aligned_cols=25 Identities=36% Similarity=0.771 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2epz_A 10 EKPFDCIDCGKAFSDHIGLNQHRRI 34 (46)
T ss_dssp CCSBCCTTTCCCBSSHHHHHHHHTT
T ss_pred CCCeECCCCCceeCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 167
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.89 E-value=0.87 Score=32.56 Aligned_cols=25 Identities=32% Similarity=0.610 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.....|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emz_A 10 ERPFKCNECGKGFGRRSHLAGHLRL 34 (46)
T ss_dssp CCSCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CCCeECCCCCcccCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 168
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.89 E-value=0.96 Score=32.31 Aligned_cols=26 Identities=27% Similarity=0.631 Sum_probs=22.8
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em8_A 9 GEKPYKCVECGKGYKRRLDLDFHQRV 34 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCCeECcccCchhCCHHHHHHHHHH
Confidence 34569999999999999999999874
No 169
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.85 E-value=0.91 Score=32.36 Aligned_cols=24 Identities=25% Similarity=0.618 Sum_probs=21.6
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|..|++.|.+...|..|+++
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2em3_A 11 KPYECKVCSKAFTQKAHLAQHQKT 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH
T ss_pred cCeECCCCCcccCCHHHHHHHHHH
Confidence 458999999999999999999864
No 170
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.78 E-value=0.96 Score=32.23 Aligned_cols=26 Identities=27% Similarity=0.404 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++-|.+...|..|+++
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yso_A 9 REKSHQCRECGEIFFQYVSLIEHQVL 34 (46)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCCCEEccccChhhCCHHHHHHHHHH
Confidence 34459999999999999999999864
No 171
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.76 E-value=0.94 Score=32.20 Aligned_cols=25 Identities=32% Similarity=0.608 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emm_A 10 ERPHKCNECGKSFIQSAHLIQHQRI 34 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCeeCCCCChhhCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 172
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.69 E-value=1.1 Score=31.88 Aligned_cols=26 Identities=35% Similarity=0.764 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|.++
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2en1_A 9 GEKPFKCEECGKRFTQNSQLHSHQRV 34 (46)
T ss_dssp CCCSEEETTTTEEESSHHHHHHHGGG
T ss_pred CCCCeeCCCCCcccCCHHHHHHHHHH
Confidence 34458999999999999999999864
No 173
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.66 E-value=0.93 Score=32.32 Aligned_cols=26 Identities=35% Similarity=0.705 Sum_probs=22.7
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+..+|..|+++
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2en6_A 9 GEKPYGCNECGKTFSQKSILSAHQRT 34 (46)
T ss_dssp SSCCEEETTTTEEESSHHHHHHHHHH
T ss_pred CCcCeECCCCCcccCchHHHHHHHHH
Confidence 34558999999999999999999875
No 174
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.62 E-value=0.99 Score=32.08 Aligned_cols=25 Identities=32% Similarity=0.662 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.....|..|+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (45)
T 2epu_A 10 QKPFECTHCGKSFRAKGNLVTHQRI 34 (45)
T ss_dssp CCSEEETTTTEEESSHHHHHHHHTT
T ss_pred CcCccCCCCCCccCChHHHHHHHHH
Confidence 3458999999999999999999864
No 175
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.43 E-value=0.86 Score=32.59 Aligned_cols=25 Identities=28% Similarity=0.652 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytt_A 10 EKPYQCSECGKSFSGSYRLTQHWIT 34 (46)
T ss_dssp CCTTCCSSSCCCCSSHHHHHHHHTH
T ss_pred CCCeeCCCCCcccCCHHHHHHHHHH
Confidence 3458999999999999999999875
No 176
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.32 E-value=0.92 Score=32.42 Aligned_cols=25 Identities=28% Similarity=0.673 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.....|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoz_A 10 EKPYSCNVCGKAFVLSAHLNQHLRV 34 (46)
T ss_dssp CCSEEETTTTEEESSHHHHHHHHHH
T ss_pred CCCeECcccChhhCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 177
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.23 E-value=0.99 Score=32.08 Aligned_cols=25 Identities=24% Similarity=0.518 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.....|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq3_A 10 EKPYECNQCGKAFSVRSSLTTHQAI 34 (46)
T ss_dssp CCSSEETTTTEECSSHHHHHHHHTT
T ss_pred CCCeECCCCChhhCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 178
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.20 E-value=1.1 Score=31.89 Aligned_cols=25 Identities=32% Similarity=0.911 Sum_probs=22.1
Q ss_pred CCceeecccccccccChHHHHHhhc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFR 77 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k 77 (680)
|...|-|..|++.|.+...|..|.+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~ 33 (47)
T 2epx_A 9 GKKPYECIECGKAFIQNTSLIRHWR 33 (47)
T ss_dssp CCCSBCCSSSCCCBSSHHHHHHHHT
T ss_pred CCCCEECCccCchhCChHHHHHHhH
Confidence 3445899999999999999999987
No 179
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.19 E-value=1.1 Score=32.03 Aligned_cols=25 Identities=32% Similarity=0.618 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytq_A 10 EKPYGCSECGKAFSSKSYLIIHMRT 34 (46)
T ss_dssp CCSCBCSSSCCBCSCHHHHHHHHTT
T ss_pred CCCcCCCccChhhCChHHHHHHHHH
Confidence 3458999999999999999999875
No 180
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.13 E-value=0.89 Score=32.09 Aligned_cols=25 Identities=40% Similarity=0.692 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.....|..|.++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2yu5_A 10 ENPFKCSKCDRVFTQRNYLVQHERT 34 (44)
T ss_dssp CCSEECSSSSCEESSSHHHHHHHHH
T ss_pred CCCeECCCCCchhCCHHHHHHHhHh
Confidence 3458999999999999999999864
No 181
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.13 E-value=1.1 Score=31.97 Aligned_cols=26 Identities=31% Similarity=0.640 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+..+|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2enc_A 9 GEKPFKCEECGKGFYTNSQCYSHQRS 34 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCCcCCCCCCCcCCChHHHHHHHHH
Confidence 34569999999999999999999864
No 182
>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=78.09 E-value=6.1 Score=45.38 Aligned_cols=97 Identities=8% Similarity=0.220 Sum_probs=63.0
Q ss_pred CCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCC-ce
Q psy10095 402 KDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNM-KY 480 (680)
Q Consensus 402 ~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~L-py 480 (680)
...|++++.+|+|||+++ . .|.. ...||..++.+.+- .+ .-|..+....+.+++.||+ .+
T Consensus 221 ~~~pvRLFEIGrVFR~D~--------~---lDat---h~~Ef~qLeGlv~G-~~----vdF~DLKGvLE~LL~~LGi~~v 281 (648)
T 2odr_B 221 KPLPFKLFSIDRCFRREQ--------K---EDKS---HLMTYHSASCAIAG-EG----VDINDGKAIAEGLLSQFGFTNF 281 (648)
T ss_dssp SCSCEEEEEEEEEECCCS--------C---CCSS---CCSEEEEEEEEEEC-TT----CCHHHHHHHHHHHHHTTTCCCE
T ss_pred CCCCeEEEEEeeEEecCc--------c---cccc---CCCcceEEEEEEEC-CC----CCHHHHHHHHHHHHHHcCCCeE
Confidence 467999999999999851 0 0111 12699999999876 31 2377899999999999998 46
Q ss_pred EEeecCCCCCCcccccceeeeeeecCCCceeeeeecC
Q psy10095 481 RICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLN 517 (680)
Q Consensus 481 RVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~S 517 (680)
|+..-....=.+-..+...|.++-|+.+.|.||.-|-
T Consensus 282 rfrpse~~~p~yhPGreAEI~v~~~g~~GW~EIG~~G 318 (648)
T 2odr_B 282 KFIPDEKKSKYYTPETQTEVYAYHPKLKEWLEVATFG 318 (648)
T ss_dssp EEEECTTCCTTBCTTCCEEEEEEETTTTEEEEEEEEE
T ss_pred EEEECCCCCcCcCCceEEEEEEecCCCCCCEEEEEEe
Confidence 6653100111233345566666555544677877664
No 183
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.05 E-value=1.1 Score=31.88 Aligned_cols=25 Identities=28% Similarity=0.624 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoe_A 10 EKPYKCNECGKVFTQNSHLANHQRI 34 (46)
T ss_dssp CCSSEETTTTEECSSHHHHHHHHGG
T ss_pred CCCeECCCcChhhCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 184
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.02 E-value=0.94 Score=32.29 Aligned_cols=24 Identities=21% Similarity=0.506 Sum_probs=21.4
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|..|++.|.+...|..|+++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2yti_A 11 KPYKCNECGKVFTQNSHLARHRGI 34 (46)
T ss_dssp CTTCCSSSCCCCSSHHHHHHHHTT
T ss_pred cCeECCCCCcccCChhHHHHHhHh
Confidence 448899999999999999999864
No 185
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.01 E-value=0.91 Score=32.27 Aligned_cols=25 Identities=28% Similarity=0.610 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytr_A 10 EKPYKCNECGKAFSQTSKLARHQRI 34 (46)
T ss_dssp CCTTCCTTTCCCCSSHHHHHHHHTT
T ss_pred CcCcCCCCCCCccCCHHHHHHHHHh
Confidence 3448899999999999999999865
No 186
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=77.98 E-value=0.99 Score=32.26 Aligned_cols=25 Identities=28% Similarity=0.610 Sum_probs=21.9
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emk_A 10 EKPYECKECGKAFSQTTHLIQHQRV 34 (46)
T ss_dssp SCSCBCSSSCCBCSCHHHHHHHHHH
T ss_pred CCceECCCCCchhCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 187
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.98 E-value=1 Score=32.11 Aligned_cols=25 Identities=28% Similarity=0.652 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emh_A 10 ERPYICTVCGKAFTDRSNLIKHQKI 34 (46)
T ss_dssp CCSEECTTTCCEESSHHHHHHHHHH
T ss_pred CCCcCCCCCCchhCCHHHHHHHHHh
Confidence 3458999999999999999999863
No 188
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.98 E-value=1 Score=32.15 Aligned_cols=25 Identities=28% Similarity=0.627 Sum_probs=21.9
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.....|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoh_A 10 KKPYECKECRKTFIQIGHLNQHKRV 34 (46)
T ss_dssp SCSCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CCCcCCCCcCchhCCHHHHHHHHHH
Confidence 3458899999999999999999864
No 189
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.93 E-value=1 Score=32.10 Aligned_cols=26 Identities=23% Similarity=0.477 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emp_A 9 GVKPYMCNECGKAFSVYSSLTTHQVI 34 (46)
T ss_dssp CCCSEECSSSCCEESCHHHHHHHHHH
T ss_pred CCcCeECCCCCchhCCHHHHHHHHHH
Confidence 34458999999999999999999864
No 190
>2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=77.87 E-value=6.2 Score=45.40 Aligned_cols=97 Identities=8% Similarity=0.220 Sum_probs=63.0
Q ss_pred CCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCC-ce
Q psy10095 402 KDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNM-KY 480 (680)
Q Consensus 402 ~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~L-py 480 (680)
...|++++.+|+|||+++ . .|.. ...||..++.+.+- .+ .-|..+....+.+++.||+ .+
T Consensus 221 ~~~pvRLFEIGrVFR~D~--------~---lDat---h~~Ef~qLeGlv~G-~~----vdF~DLKGvLE~LL~~LGi~~v 281 (665)
T 2odr_A 221 KPLPFKLFSIDRCFRREQ--------K---EDKS---HLMTYHSASCAIAG-EG----VDINDGKAIAEGLLSQFGFTNF 281 (665)
T ss_dssp SCSCEEEEEEEEEECCCS--------C---CCSS---CCSEEEEEEEEEEC-TT----CCHHHHHHHHHHHHHTTTCCCE
T ss_pred CCCCeEEEEEeeEEecCc--------c---cccc---CCCcceEEEEEEEC-CC----CCHHHHHHHHHHHHHHcCCCeE
Confidence 467999999999999851 0 0111 12699999999876 31 2378899999999999998 46
Q ss_pred EEeecCCCCCCcccccceeeeeeecCCCceeeeeecC
Q psy10095 481 RICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLN 517 (680)
Q Consensus 481 RVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~S 517 (680)
|+..-....=.+-..+...|.++-|+.+.|.||.-|-
T Consensus 282 rfrpse~~~p~yhPGreAEI~V~~~g~~GW~EIG~~G 318 (665)
T 2odr_A 282 KFIPDEKKSKYYTPETQTEVYAYHPKLKEWLEVATFG 318 (665)
T ss_dssp EEEECTTCCTTBCTTCCEEEEEEETTTTEEEEEEEEE
T ss_pred EEEECCCCCCCcCCceEEEEEEecCCCCCCEEEEEEe
Confidence 6653100111233345566666555544677877664
No 191
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.86 E-value=1.1 Score=31.95 Aligned_cols=25 Identities=24% Similarity=0.558 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep2_A 10 EKPYECSICGKSFTKKSQLHVHQQI 34 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHT
T ss_pred CcCcCCCCCCcccCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 192
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.80 E-value=1 Score=32.04 Aligned_cols=26 Identities=35% Similarity=0.710 Sum_probs=22.4
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytd_A 9 GEKPYKCSECGKAFHRHTHLNEHRRI 34 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCcCeECCCCCCeeCChHHHHHHHHH
Confidence 33459999999999999999999764
No 193
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.76 E-value=0.96 Score=32.41 Aligned_cols=25 Identities=28% Similarity=0.676 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytm_A 10 EKPYKCMECGKAFGDNSSCTQHQRL 34 (46)
T ss_dssp CCSSSBTTTTBCCSSHHHHHHHHHH
T ss_pred CCCcCCCCCCchhCCHHHHHHHHHH
Confidence 3458899999999999999999865
No 194
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=77.63 E-value=1 Score=33.54 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=21.5
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|-|..|++.|.....|..|+++
T Consensus 23 k~~~C~~C~k~f~~~~~L~~H~~~ 46 (54)
T 1yui_A 23 QPATCPICYAVIRQSRNLRRHLEL 46 (54)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHHH
Confidence 348999999999999999999864
No 195
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.47 E-value=1.1 Score=32.01 Aligned_cols=24 Identities=21% Similarity=0.584 Sum_probs=21.6
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|..|++.|.....|..|+++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yto_A 11 KPYKCSDCGKAFTRKSGLHIHQQS 34 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCEECcccCCccCCHhHHHHHHHH
Confidence 458999999999999999999865
No 196
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.46 E-value=1.1 Score=31.98 Aligned_cols=26 Identities=31% Similarity=0.770 Sum_probs=22.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytk_A 9 GEKPYKCNECGKVFTQNSHLTNHWRI 34 (46)
T ss_dssp SSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCCEeCCcCCCccCCHHHHHHHHHH
Confidence 34458999999999999999999864
No 197
>2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=77.43 E-value=6.5 Score=45.35 Aligned_cols=97 Identities=8% Similarity=0.220 Sum_probs=62.9
Q ss_pred CCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCC-ce
Q psy10095 402 KDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNM-KY 480 (680)
Q Consensus 402 ~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~L-py 480 (680)
...|++++.+|+|||+++ . .|.. ...||..++.+.+- .+ .-|..+....+.+++.||+ .+
T Consensus 221 ~~~pvRLFEIGrVFR~D~--------~---lDat---h~~Ef~qLeGlv~G-~~----vDF~DLKGvLE~LL~~LGi~~v 281 (685)
T 2odr_D 221 KPLPFKLFSIDRCFRREQ--------K---EDKS---HLMTYHSASCAIAG-EG----VDINDGKAIAEGLLSQFGFTNF 281 (685)
T ss_dssp SCSCEEEEEEEEEECCCS--------C---CCSS---CCSEEEEEEEEEEC-TT----CCHHHHHHHHHHHHHTTTCCCE
T ss_pred CCCCeEEEEeccEEecCc--------c---cccc---CCCcceEEEEEEEC-CC----CCHHHHHHHHHHHHHHcCCCeE
Confidence 467999999999999851 0 0111 12699999999876 31 2378899999999999998 46
Q ss_pred EEeecCCCCCCcccccceeeeeeecCCCceeeeeecC
Q psy10095 481 RICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLN 517 (680)
Q Consensus 481 RVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~S 517 (680)
|+..-....=.+-..+...|.++-|+.+.|.||.-|-
T Consensus 282 rfrpse~~~p~yHPGreAEI~V~~~g~~GW~EIG~~G 318 (685)
T 2odr_D 282 KFIPDEKKSKYYTPETQTEVYAYHPKLKEWLEVATFG 318 (685)
T ss_dssp EEEECTTCCTTBCTTCCEEEEEEETTTTEEEEEEEEE
T ss_pred EEEECCCCCCCcCCceEEEEEEecCCCCCCEEEEEEe
Confidence 6653100111233345556666555544677877664
No 198
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.37 E-value=1.2 Score=31.61 Aligned_cols=25 Identities=24% Similarity=0.501 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eq0_A 10 EKPYKCHECGKVFRRNSHLARHQLI 34 (46)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHTT
T ss_pred CCCeECCCCCchhCCHHHHHHHHHH
Confidence 3458999999999999999999865
No 199
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=77.29 E-value=0.93 Score=33.62 Aligned_cols=25 Identities=28% Similarity=0.485 Sum_probs=19.5
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+..+|..|+++
T Consensus 2 ~~~~~C~~C~~~f~~~~~l~~H~~~ 26 (57)
T 3uk3_C 2 SSSRECSYCGKFFRSNYYLNIHLRT 26 (57)
T ss_dssp ---CBCTTTCCBCSCHHHHHHHHHH
T ss_pred CCCccCCCCcchhCChHHHHHHHHH
Confidence 3457899999999999999999874
No 200
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=77.27 E-value=6.6 Score=45.42 Aligned_cols=97 Identities=8% Similarity=0.220 Sum_probs=63.0
Q ss_pred CCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcCC-ce
Q psy10095 402 KDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLNM-KY 480 (680)
Q Consensus 402 ~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~L-py 480 (680)
...|++++.+|+|||+++ . .|.. ...||..++.+.+- .+ .-|..+....+.+++.||+ .+
T Consensus 221 ~~~pvRLFEIGrVFR~D~--------~---lDat---h~~EfhqLeGlv~G-~~----vDF~DLKGvLE~LL~~LGi~~v 281 (701)
T 2odr_C 221 KPLPFKLFSIDRCFRREQ--------K---EDKS---HLMTYHSASCAIAG-EG----VDINDGKAIAEGLLSQFGFTNF 281 (701)
T ss_dssp SCSCEEEEEEEEEECCCS--------C---CCSS---CCSEEEEEEEEEEC-TT----CCHHHHHHHHHHHHHTTTCCCE
T ss_pred CCCCeEEEEEeeEEccCc--------c---cccc---CCCcceEEEEEEEC-CC----CCHHHHHHHHHHHHHHcCCCeE
Confidence 477999999999999851 0 0111 12699999999876 31 2378899999999999998 46
Q ss_pred EEeecCCCCCCcccccceeeeeeecCCCceeeeeecC
Q psy10095 481 RICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLN 517 (680)
Q Consensus 481 RVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~S 517 (680)
|+..-....=.+-..+...|.++-|+.+.|.||.-|-
T Consensus 282 rfrpse~~~p~yHPGreAEI~V~~~g~~GW~EIG~~G 318 (701)
T 2odr_C 282 KFIPDEKKSKYYTPETQTEVYAYHPKLKEWLEVATFG 318 (701)
T ss_dssp EEEECTTCCTTBCTTCCEEEEEEETTTTEEEEEEEEE
T ss_pred EEEECCCCCCCcCCceEEEEEEecCCCCCCEEEEEEe
Confidence 6653100111233345566666555544677877664
No 201
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.13 E-value=1 Score=32.05 Aligned_cols=26 Identities=31% Similarity=0.598 Sum_probs=22.4
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|.++
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoq_A 9 GEKPFKCDICGKSFCGRSRLNRHSMV 34 (46)
T ss_dssp SSCSCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CCCCcCCCcCCchhCCHHHHHHHHHH
Confidence 33458999999999999999999764
No 202
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.99 E-value=1 Score=32.10 Aligned_cols=25 Identities=28% Similarity=0.595 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|+++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytg_A 10 EKPFKCGECGKSYNQRVHLTQHQRV 34 (46)
T ss_dssp CCSEECTTTCCEESSSHHHHTTGGG
T ss_pred CCCeECCCCCcccCCHHHHHHHHHH
Confidence 3459999999999999999999864
No 203
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=76.93 E-value=1.2 Score=32.69 Aligned_cols=24 Identities=17% Similarity=0.591 Sum_probs=21.5
Q ss_pred CceeecccccccccChHHHHHhhc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFR 77 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k 77 (680)
.-.|-|..|++-|.....|..|++
T Consensus 5 ~kp~~C~~C~k~F~~~~~L~~H~~ 28 (48)
T 3iuf_A 5 DKPYACDICGKRYKNRPGLSYHYA 28 (48)
T ss_dssp TSCEECTTTCCEESSHHHHHHHHH
T ss_pred CcCEECCCcCcccCCHHHHHHHhh
Confidence 345899999999999999999986
No 204
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.78 E-value=1.3 Score=31.47 Aligned_cols=25 Identities=32% Similarity=0.533 Sum_probs=21.9
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2en8_A 10 EKSHTCDECGKNFCYISALRIHQRV 34 (46)
T ss_dssp CSSEECTTTCCEESSHHHHHHHHTT
T ss_pred CCCeECCCcCcccCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 205
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=76.76 E-value=1.4 Score=34.93 Aligned_cols=24 Identities=21% Similarity=0.578 Sum_probs=21.1
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|.+|++-|.....|..|+++
T Consensus 31 kp~~C~~C~k~F~~~~~L~~H~~~ 54 (60)
T 4gzn_C 31 RPRSCPECGKCFRDQSEVNRHLKV 54 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHGGG
T ss_pred cCeECCCCCCCcCCHHHHHHHhCc
Confidence 348999999999999999999864
No 206
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.66 E-value=0.88 Score=32.13 Aligned_cols=25 Identities=20% Similarity=0.521 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|.++
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2eox_A 10 SKSYNCNECGKAFTRIFHLTRHQKI 34 (44)
T ss_dssp CCCEEETTTTEEESSSHHHHTTHHH
T ss_pred CCCeECcccCcccCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 207
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.64 E-value=1 Score=32.05 Aligned_cols=25 Identities=28% Similarity=0.618 Sum_probs=21.9
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.....|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yu8_A 10 EKPYKCNECGKVFTQNSHLARHRRV 34 (46)
T ss_dssp CSSEECSSSCCEESSSHHHHHHTHH
T ss_pred CCCeECCcCCchhCCHHHHHHHHHh
Confidence 3458999999999999999999863
No 208
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.43 E-value=1.2 Score=32.01 Aligned_cols=24 Identities=21% Similarity=0.422 Sum_probs=21.0
Q ss_pred ceeeccc--ccccccChHHHHHhhcc
Q psy10095 55 AQFYCLH--CARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~--C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|.. |++-|.+...|..|+++
T Consensus 8 kp~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 8 ILLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CCEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCccCCHHHHHHHHHh
Confidence 3489986 99999999999999864
No 209
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.85 E-value=1.1 Score=31.78 Aligned_cols=25 Identities=32% Similarity=0.489 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+...|..|+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2epw_A 10 EKPCKCTECGKAFCWKSQLIMHQRT 34 (46)
T ss_dssp CCSEECSSSCCEESSSHHHHHHHHH
T ss_pred CCCeeCCCCCCccCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 210
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=75.80 E-value=1.5 Score=29.81 Aligned_cols=26 Identities=23% Similarity=0.493 Sum_probs=22.3
Q ss_pred CCceeecc--cccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCL--HCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~--~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|. .|++-|.....|..|.++
T Consensus 5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 5 KKKQHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp SCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence 45568998 599999999999999864
No 211
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=75.68 E-value=0.27 Score=32.71 Aligned_cols=22 Identities=36% Similarity=0.878 Sum_probs=20.2
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|..|++-|.....|..|+++
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~~~ 24 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHIKT 24 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSSTTS
T ss_pred CCCCCCCcccCCHHHHHHHHHH
Confidence 6799999999999999999865
No 212
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=75.68 E-value=1 Score=32.12 Aligned_cols=25 Identities=32% Similarity=0.701 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|..|++.|.+..+|..|+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ely_A 10 EKPFKCVECGKGFSRRSALNVHHKL 34 (46)
T ss_dssp CCSBCCSSSCCCBSSTTHHHHHHHH
T ss_pred CCCcccCccCcccCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 213
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B*
Probab=75.41 E-value=4.6 Score=47.52 Aligned_cols=135 Identities=13% Similarity=0.105 Sum_probs=79.1
Q ss_pred HHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCC-ceEeecCCCccccccccCCCceeeccchhhhhhhhhcc
Q psy10095 318 IPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHD-NMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTN 396 (680)
Q Consensus 318 Li~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~-~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~ 396 (680)
+.+...+.+. ..||+++.+..|+..+.... +.| ..+ .+++.+.-++ + ...-+.+|+|+ -|-++-.|
T Consensus 498 ~~~~ir~~L~-~~Gf~Evitysfvs~~~~~~--l~~--~~~~~v~L~NPis~-e---~svLRtsLlpg----LL~~l~~N 564 (795)
T 2rhq_B 498 KTRTLKETLE-GAGLNQAITYSLVSKDHAKD--FAL--QERPTISLLMPMSE-A---HATLRQSLLPH----LIEATAYN 564 (795)
T ss_dssp HHHHHHHHHH-HTTCEECCCCSEECTTTTTT--TCS--SCCCCEECSSCSCT-T---SSEECSCSHHH----HHHHHHHH
T ss_pred HHHHHHHHHH-HCCCEEEecCCccCHHHHHh--hCC--CCCceEEEcCCCch-h---hhhhhhccHHH----HHHHHHHH
Confidence 3444443333 46999999999998875532 224 233 4676631110 0 00012233331 12222222
Q ss_pred cccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHH------HHHHHHHHHH
Q psy10095 397 HSVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCK------EFQNIQSLLK 470 (680)
Q Consensus 397 e~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~------~~eeml~~~e 470 (680)
. .-...|++++-+|++|+++. . .++. +||.+++.+..-...+.+|. -|..+....+
T Consensus 565 ~--~r~~~~vrlFEiG~Vf~~d~---------~--~~~~-----~e~~~la~l~~G~~~~~~w~~~~~~~dF~dlKg~le 626 (795)
T 2rhq_B 565 V--ARKNKDVRLYEIGRVFFGNG---------E--GELP-----DEVEYLSGILTGEYVVNAWQGKKEEIDFFIAKGVVD 626 (795)
T ss_dssp H--HTTCCCEEEEEEEEEEECCC---------T--TSCC-----EEEEEEEEEEESEEEEEGGGTEEEECCHHHHHHHHH
T ss_pred h--cCCCCCeEEEEEeeEEecCC---------c--ccCc-----chhhEEEEEEEeccccccccCCCCCCCHHHHHHHHH
Confidence 1 23456999999999998741 1 1111 79999988775522233442 4889999999
Q ss_pred HHHHHcCCceEEe
Q psy10095 471 SVMDKLNMKYRIC 483 (680)
Q Consensus 471 ~il~~L~LpyRVv 483 (680)
.+++.||++++..
T Consensus 627 ~ll~~lG~~~~~~ 639 (795)
T 2rhq_B 627 RVAEKLNLEFSYK 639 (795)
T ss_dssp HHHHHHTCCCEEE
T ss_pred HHHHHcCCcEEEE
Confidence 9999999987654
No 214
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.31 E-value=1.2 Score=31.75 Aligned_cols=24 Identities=29% Similarity=0.585 Sum_probs=21.4
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|..|++-|.+...|..|+++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 11 KPFQCKECGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp CSEECSSSCCEESSSHHHHHHHHH
T ss_pred CCeeCcccChhhCCHHHHHHHHHH
Confidence 348999999999999999999864
No 215
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=73.92 E-value=1.3 Score=33.94 Aligned_cols=26 Identities=27% Similarity=0.620 Sum_probs=22.4
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+..+|..|.++
T Consensus 7 ~~k~~~C~~C~k~f~~~~~l~~H~~~ 32 (66)
T 2drp_A 7 GEHTYRCKVCSRVYTHISNFCRHYVT 32 (66)
T ss_dssp ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred CCcceECCCCcchhCCHHHHHHHHHH
Confidence 34568999999999999999999865
No 216
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=73.70 E-value=1.6 Score=34.08 Aligned_cols=22 Identities=41% Similarity=0.788 Sum_probs=14.5
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|..|++.|.+...|..|.++
T Consensus 50 ~~C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 50 FQCRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp EECTTTCCEESCHHHHHHHHTT
T ss_pred eECCCCCchhCCHHHHHHHHHh
Confidence 6666666666666666666553
No 217
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=73.63 E-value=1.6 Score=32.33 Aligned_cols=23 Identities=17% Similarity=0.469 Sum_probs=21.2
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|-|..|++.|.+..+|..|+++
T Consensus 32 ~~~C~~C~~~f~~~~~l~~H~~~ 54 (57)
T 3uk3_C 32 PYKCEFCEYAAAQKTSLRYHLER 54 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH
T ss_pred CcCCCCCcchhCCHHHHHHHHHH
Confidence 48999999999999999999875
No 218
>3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=73.22 E-value=17 Score=41.25 Aligned_cols=129 Identities=15% Similarity=0.201 Sum_probs=74.1
Q ss_pred HHHHHHHHHhhCCcEeeccCcccchHHH-HhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhhhhccc
Q psy10095 319 PIILKDYFTVKHNFMPFTNTDLCKGVIV-EGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNH 397 (680)
Q Consensus 319 i~y~ld~~~~~~Gf~~i~~P~~Vr~~v~-~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e 397 (680)
.+-..+.+ ...||+++.++.|+..... ..-+ .|.+..+.+++.+.-++ + ...-+..|+|+ -|-++-.|.
T Consensus 397 ~~~ir~~l-~~~Gf~Evitysf~s~~~~~~~l~-~~~~~~~~v~L~NPis~-e---~svmRtsLlpg----LL~~l~~N~ 466 (589)
T 3l4g_B 397 TELLRHDM-AAAGFTEALTFALCSQEDIADKLG-VDISATKAVHISNPKTA-E---FQVARTTLLPG----LLKTIAANR 466 (589)
T ss_dssp HHHHHHHH-HHTTCEECCCCSEECHHHHTGGGT-SCTTSSCCCBBSSCSSG-G---GSEECSCSHHH----HHHHHHHTT
T ss_pred HHHHHHHH-HHCCCEEEecCcccCHHHHHHHhC-CCCCCCCeEEEcCCCch-h---HhHHHHHHHHH----HHHHHHHHh
Confidence 44344333 3479999999999998853 4455 34333345666531110 0 00012334431 122333342
Q ss_pred ccCCCCCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHHHHHHHHHHHHHHHHHHcC
Q psy10095 398 SVNVKDLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLCKEFQNIQSLLKSVMDKLN 477 (680)
Q Consensus 398 ~l~~~~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~~~~eeml~~~e~il~~L~ 477 (680)
. ...|++++-+|++|++.+ . +..| .+||.++..+..- .. .-|..+-...+.+++.||
T Consensus 467 --~-~~~~vrlFEiG~Vf~~d~---------~---~~~~---~~e~~~la~~~~g-~~----~~f~~lkg~le~ll~~lg 523 (589)
T 3l4g_B 467 --K-MPLPLKLFEISDIVIKDS---------N---TDVG---AKNYRHLCAVYYN-KN----PGFEIIHGLLDRIMQLLD 523 (589)
T ss_dssp --T-SCSCEEEEEEEEEEEECT---------T---STTS---EEEEEEEEEEEES-SS----CCHHHHHHHHHHHHHHTT
T ss_pred --c-CCCceEEEEeeeEEecCC---------c---cccC---CccccEEEEEEEC-CC----CCHHHHHHHHHHHHHHcC
Confidence 2 236999999999998741 1 1112 2477777765443 22 137788888899999999
Q ss_pred Cce
Q psy10095 478 MKY 480 (680)
Q Consensus 478 Lpy 480 (680)
++.
T Consensus 524 ~~~ 526 (589)
T 3l4g_B 524 VPP 526 (589)
T ss_dssp CCB
T ss_pred CCc
Confidence 973
No 219
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=72.36 E-value=33 Score=31.84 Aligned_cols=69 Identities=14% Similarity=0.059 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 185 MREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNVI 254 (680)
Q Consensus 185 l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~ 254 (680)
+-+++-+++.+.+.|+++-..+.+.+..++..-... ..+.+.+..+..++++++..|+.++..++.++.
T Consensus 66 iadEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~-~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~~ 134 (138)
T 3hnw_A 66 IADDYFKAKKMADSLSLDIENKDKEIYDLKHELIAA-QIKAESSAKEIKELKSEINKYQKNIVKLETELN 134 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346666666667777666666666666553210000 112344445556666666666666666655543
No 220
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=72.06 E-value=1.6 Score=31.02 Aligned_cols=24 Identities=21% Similarity=0.533 Sum_probs=21.6
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|..|++-|.....|..|+++
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~ 32 (45)
T 2epq_A 9 KPYSCPVCGLRFKRKDRMSYHVRS 32 (45)
T ss_dssp CSSEETTTTEECSCHHHHHHHHHH
T ss_pred CCCcCCCCCcccCCHHHHHHHHHH
Confidence 458999999999999999999865
No 221
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=72.02 E-value=1.7 Score=33.26 Aligned_cols=25 Identities=16% Similarity=0.509 Sum_probs=22.3
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+..+|..|.++
T Consensus 38 ~~~~~C~~C~k~f~~~~~L~~H~~~ 62 (66)
T 2drp_A 38 VKVYPCPFCFKEFTRKDNMTAHVKI 62 (66)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHH
T ss_pred CcCeECCCCCCccCCHHHHHHHHHH
Confidence 3459999999999999999999875
No 222
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=71.99 E-value=1.8 Score=35.15 Aligned_cols=24 Identities=25% Similarity=0.515 Sum_probs=21.8
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|.+|+|.|.....|..|+++
T Consensus 12 kpy~C~~CgK~F~~~s~L~~H~r~ 35 (66)
T 2epp_A 12 GILPCGLCGKVFTDANRLRQHEAQ 35 (66)
T ss_dssp CCCCCTTTCCCCSCHHHHHHHHHH
T ss_pred cCcCCCCCCCccCCHHHHHhhhhh
Confidence 348899999999999999999876
No 223
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=71.65 E-value=1.6 Score=34.54 Aligned_cols=22 Identities=32% Similarity=0.836 Sum_probs=20.7
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|.+|++-|.+...|..|+++
T Consensus 5 y~C~~C~k~F~~~~~L~~H~~~ 26 (60)
T 4gzn_C 5 FFCNFCGKTYRDASGLSRHRRA 26 (60)
T ss_dssp EECTTTCCEESSHHHHHHHHHH
T ss_pred ccCCCCCCEeCCHHHHHHHHHH
Confidence 8899999999999999999875
No 224
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=71.14 E-value=2 Score=29.02 Aligned_cols=25 Identities=28% Similarity=0.652 Sum_probs=21.3
Q ss_pred Cceeecc--cccccccChHHHHHhhcc
Q psy10095 54 EAQFYCL--HCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~--~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|. .|++-|.....|..|.++
T Consensus 4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 4 DKPFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp CCCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred CcceECCCCCCCcccCCHHHHHHHHHH
Confidence 3458899 599999999999999864
No 225
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=69.91 E-value=2.2 Score=33.46 Aligned_cols=26 Identities=31% Similarity=0.699 Sum_probs=22.2
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 11 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 36 (72)
T 1x6e_A 11 GEKPYGCVECGKAFSRSSILVQHQRV 36 (72)
T ss_dssp TCCCEECSSSCCEESSHHHHHHHHHG
T ss_pred CCCCccCCCCCCccCCHHHHHHHHHh
Confidence 34568999999999999999999874
No 226
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=69.55 E-value=2.5 Score=33.97 Aligned_cols=24 Identities=29% Similarity=0.635 Sum_probs=19.6
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|-|..|++.|.+..+|..|+++
T Consensus 64 ~~~~C~~C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 64 RPFQCQKCDRAFSRSDHLALHMKR 87 (89)
T ss_dssp CCEECSSSSCEESSHHHHHHHGGG
T ss_pred CCccCCCCCcccCCHHHHHHHHHh
Confidence 348888888888888888888764
No 227
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.44 E-value=2.1 Score=33.99 Aligned_cols=26 Identities=23% Similarity=0.387 Sum_probs=21.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 4 ~~k~~~C~~C~k~f~~~~~L~~H~~~ 29 (78)
T 2d9h_A 4 GSSGLQCEICGFTCRQKASLNWHQRK 29 (78)
T ss_dssp SCCCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCcCeECCCCCCeeCCHHHHHHHHHH
Confidence 44568899999999999999999754
No 228
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=69.24 E-value=2.5 Score=32.88 Aligned_cols=26 Identities=23% Similarity=0.308 Sum_probs=21.5
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 6 ~~~~~~C~~C~k~f~~~~~L~~H~~~ 31 (70)
T 1x5w_A 6 SGHPEKCSECSYSCSSKAALRIHERI 31 (70)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHHGG
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHH
Confidence 34458899999999999999999875
No 229
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=69.15 E-value=2.1 Score=33.74 Aligned_cols=24 Identities=25% Similarity=0.481 Sum_probs=18.7
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|.|..|++.|.+...|..|+++
T Consensus 56 ~~~~C~~C~~~f~~~~~l~~H~~~ 79 (82)
T 2kmk_A 56 KPHKCQVCGKAFSQSSNLITHSRK 79 (82)
T ss_dssp CCEECTTTSCEESSHHHHHHHHHH
T ss_pred CCCcCCCcchhhCChHHHHHHHHh
Confidence 347888888888888888888764
No 230
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=68.57 E-value=2.2 Score=33.13 Aligned_cols=24 Identities=21% Similarity=0.438 Sum_probs=21.5
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|-|..|++.|.+...|..|+++
T Consensus 36 ~~~~C~~C~~~f~~~~~L~~H~~~ 59 (70)
T 1x5w_A 36 RPFKCNYCSFDTKQPSNLSKHMKK 59 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHHH
T ss_pred CCEeCCCCCCccCCHHHHHHHHHH
Confidence 349999999999999999999864
No 231
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=68.41 E-value=2.6 Score=31.36 Aligned_cols=26 Identities=19% Similarity=0.524 Sum_probs=22.7
Q ss_pred CCCceeecccccccccChHHHHHhhc
Q psy10095 52 PGEAQFYCLHCARHFIDEHALKEHFR 77 (680)
Q Consensus 52 pG~gq~yC~~C~r~F~~~~~l~~H~k 77 (680)
.|...|-|..|++.|.+...|..|++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~~H~~ 33 (54)
T 2eps_A 8 SVGKPYICQSCGKGFSRPDHLNGHIK 33 (54)
T ss_dssp CSSCCEECSSSCCEESSHHHHHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHHHHHH
Confidence 34456999999999999999999985
No 232
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=68.10 E-value=2.2 Score=31.98 Aligned_cols=22 Identities=41% Similarity=0.919 Sum_probs=19.9
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|..|++.|.+...|..|.++
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~ 24 (60)
T 2adr_A 3 FVCEVCTRAFARQEHLKRHYRS 24 (60)
T ss_dssp BCCTTTCCCBSCHHHHHHHHHT
T ss_pred CcCCCCccccCCHHHHHHHHHH
Confidence 7899999999999999999875
No 233
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=67.19 E-value=2.3 Score=31.44 Aligned_cols=22 Identities=32% Similarity=0.661 Sum_probs=20.3
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|..|++.|.+...|..|.++
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~ 23 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT 23 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH
T ss_pred CcCCCCcCcCCCHHHHHHHHHh
Confidence 6799999999999999999875
No 234
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=67.14 E-value=49 Score=30.68 Aligned_cols=68 Identities=9% Similarity=-0.002 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 180 FDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLD 248 (680)
Q Consensus 180 d~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~ 248 (680)
|++..+-+++..+..+++++..+-..+-..+..+...-+.. ..+.++++.+...|..++..|+..+..
T Consensus 68 dEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~-~~e~~~l~~~~~~l~~~~~~le~~~~~ 135 (138)
T 3hnw_A 68 DDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESS-AKEIKELKSEINKYQKNIVKLETELND 135 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66666666666666666554444333222222211100000 123556667777777777777766653
No 235
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=67.07 E-value=2.9 Score=34.18 Aligned_cols=26 Identities=27% Similarity=0.562 Sum_probs=22.1
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.+.|-|..|++.|.+...|..|+++
T Consensus 5 ~~~~~~C~~C~~~f~~~~~l~~H~~~ 30 (96)
T 2dmd_A 5 SSGPHKCEVCGKCFSRKDKLKTHMRC 30 (96)
T ss_dssp CCCCCCBTTTTBCCCCHHHHHHHGGG
T ss_pred CCcCeECCCCCCccCCHHHHHHHHHh
Confidence 44668899999999999999999874
No 236
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=66.79 E-value=2.9 Score=33.61 Aligned_cols=24 Identities=29% Similarity=0.564 Sum_probs=20.2
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|.|..|++.|.+...|..|+++
T Consensus 61 ~~~~C~~C~~~f~~~~~l~~H~~~ 84 (90)
T 1a1h_A 61 KPFACDICGRKFARSDERKRHTKI 84 (90)
T ss_dssp CCEECTTTCCEESSHHHHHHHHGG
T ss_pred CCccCCCCCchhCCHHHHHHHHHH
Confidence 348899999999999999999864
No 237
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=66.64 E-value=2.4 Score=34.89 Aligned_cols=24 Identities=29% Similarity=0.571 Sum_probs=19.3
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|.|..|++.|.+..+|..|+++
T Consensus 74 ~~~~C~~C~~~f~~~~~l~~H~~~ 97 (100)
T 2ebt_A 74 KPFQCGVCNRSFSRSDHLALHMKR 97 (100)
T ss_dssp CSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred CCeECCCCcCccCCHHHHHHHHHH
Confidence 348888888888888888888763
No 238
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=66.51 E-value=2.7 Score=32.93 Aligned_cols=23 Identities=30% Similarity=0.728 Sum_probs=21.2
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|-|..|++-|.+...|..|+++
T Consensus 42 ~~~C~~C~~~f~~~~~L~~H~~~ 64 (72)
T 1x6e_A 42 PYKCLECGKAFSQNSGLINHQRI 64 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHh
Confidence 49999999999999999999864
No 239
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=65.80 E-value=4 Score=31.71 Aligned_cols=30 Identities=30% Similarity=0.613 Sum_probs=25.1
Q ss_pred CCCCCCceeeccc--ccccccChHHHHHhhcc
Q psy10095 49 FDKPGEAQFYCLH--CARHFIDEHALKEHFRT 78 (680)
Q Consensus 49 ~dlpG~gq~yC~~--C~r~F~~~~~l~~H~k~ 78 (680)
.+-.+...|-|.+ |++.|.+...|..|+++
T Consensus 10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~ 41 (72)
T 2epa_A 10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT 41 (72)
T ss_dssp CCCCCCCCEECSSTTTCCEESSHHHHHHHHHH
T ss_pred CCccccCceeCCCCCCccccCCHHHHHHHHHh
Confidence 3455678899998 99999999999999864
No 240
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=64.97 E-value=2.8 Score=32.92 Aligned_cols=24 Identities=29% Similarity=0.541 Sum_probs=21.5
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|..|++.|.+...|..|+++
T Consensus 44 ~~~~C~~C~k~f~~~~~L~~H~~~ 67 (74)
T 2lce_A 44 KPYRCNICGAQFNRPANLKTHTRI 67 (74)
T ss_dssp CSEECTTTCCEESCHHHHHHHHHH
T ss_pred CCEECCCCCchhCCHHHHHHHHHh
Confidence 348999999999999999999864
No 241
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=63.99 E-value=2.9 Score=34.10 Aligned_cols=26 Identities=27% Similarity=0.455 Sum_probs=22.0
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 4 ~~~~~~C~~C~~~f~~~~~l~~H~~~ 29 (95)
T 2yt9_A 4 GSSGVACEICGKIFRDVYHLNRHKLS 29 (95)
T ss_dssp CCSCEECSSSCCEESSSHHHHHHHHH
T ss_pred CCCCeECCCCCCccCChHHHHHHHHh
Confidence 55678899999999999999999864
No 242
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.50 E-value=2.9 Score=33.15 Aligned_cols=24 Identities=29% Similarity=0.645 Sum_probs=21.3
Q ss_pred eeecccccccccChHHHHHhhccc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRTK 79 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~K 79 (680)
.|-|..|++.|.+...|..|+++.
T Consensus 45 ~~~C~~C~~~f~~~~~L~~H~~~~ 68 (77)
T 2ct1_A 45 KFHCPHCDTVIARKSDLGVHLRKQ 68 (77)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHT
T ss_pred ccCCCCCCCccCCHHHHHHHHHHh
Confidence 489999999999999999998653
No 243
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=62.86 E-value=4.2 Score=33.36 Aligned_cols=31 Identities=29% Similarity=0.513 Sum_probs=26.8
Q ss_pred CCCCCCCceeeccc--ccccccChHHHHHhhcc
Q psy10095 48 DFDKPGEAQFYCLH--CARHFIDEHALKEHFRT 78 (680)
Q Consensus 48 d~dlpG~gq~yC~~--C~r~F~~~~~l~~H~k~ 78 (680)
.++++....|.|.. |++.|.+...|..|.++
T Consensus 7 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~ 39 (100)
T 2ebt_A 7 GPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRT 39 (100)
T ss_dssp CCCCCSCCCEECCSSSCCCEESCHHHHHHHHHH
T ss_pred CcccccCcceEcCCCCCCCcccCHHHHHHHHHH
Confidence 46677788999996 99999999999999874
No 244
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=62.80 E-value=3.7 Score=33.54 Aligned_cols=24 Identities=25% Similarity=0.476 Sum_probs=20.3
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|.|..|++.|.+...|..|+++
T Consensus 63 ~~~~C~~C~~~f~~~~~l~~H~~~ 86 (96)
T 2dmd_A 63 RPFKCQICPYASRNSSQLTVHLRS 86 (96)
T ss_dssp CCEECSSSSCEESSHHHHHHHHTT
T ss_pred CCccCCCCCCccCCHHHHHHHHHH
Confidence 458899999999999999999864
No 245
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.72 E-value=4.4 Score=28.72 Aligned_cols=25 Identities=32% Similarity=0.622 Sum_probs=21.7
Q ss_pred Cceeecc--cccccccChHHHHHhhcc
Q psy10095 54 EAQFYCL--HCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~--~C~r~F~~~~~l~~H~k~ 78 (680)
.-.|-|. .|++.|.....|..|+++
T Consensus 10 ~k~~~C~~~~C~k~f~~~~~L~~H~~~ 36 (48)
T 2ent_A 10 EKPFACTWPGCGWRFSRSDELSRHRRS 36 (48)
T ss_dssp CCCEECCSSSCCCEESSHHHHHHHHTT
T ss_pred CCCeECCCCCCCCccCCHHHHHHHHHH
Confidence 3458998 899999999999999865
No 246
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=61.63 E-value=3.4 Score=29.84 Aligned_cols=23 Identities=22% Similarity=0.590 Sum_probs=21.2
Q ss_pred eecccccccccChHHHHHhhccc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRTK 79 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~K 79 (680)
|-|..|-+-|.+...|..|+..+
T Consensus 6 FiCP~C~~~l~s~~~L~~Hye~~ 28 (34)
T 3mjh_B 6 FICPQCMKSLGSADELFKHYEAV 28 (34)
T ss_dssp EECTTTCCEESSHHHHHHHHHHH
T ss_pred cCCcHHHHHcCCHHHHHHHHHhc
Confidence 89999999999999999999543
No 247
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=61.23 E-value=4.1 Score=30.39 Aligned_cols=23 Identities=26% Similarity=0.506 Sum_probs=20.8
Q ss_pred ceeecccccccccChHHHHHhhc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFR 77 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k 77 (680)
..|-|..|++.|.+...|..|.+
T Consensus 29 ~~~~C~~C~~~f~~~~~l~~H~~ 51 (60)
T 2adr_A 29 KPYPCGLCNRAFTRRDLLIRHAQ 51 (60)
T ss_dssp CSEECTTTCCEESSHHHHHHHHT
T ss_pred CCccCCCCCCccCCHHHHHHHHH
Confidence 35899999999999999999965
No 248
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=60.74 E-value=4.6 Score=31.88 Aligned_cols=24 Identities=29% Similarity=0.656 Sum_probs=21.4
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|-|..|++-|.+...|..|+++
T Consensus 45 ~~~~C~~C~~~f~~~~~L~~H~~~ 68 (77)
T 2cot_A 45 KPYKCDECGKAFIQRSHLIGHHRV 68 (77)
T ss_dssp CSEECSSSCCEESSHHHHHHHGGG
T ss_pred cCeeCCCCCCccCCHHHHHHHHHH
Confidence 348999999999999999999864
No 249
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=60.65 E-value=4.1 Score=32.22 Aligned_cols=26 Identities=27% Similarity=0.597 Sum_probs=22.9
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 15 ~~~~~~C~~C~~~f~~~~~l~~H~~~ 40 (77)
T 2cot_A 15 ERRRYKCDECGKSFSHSSDLSKHRRT 40 (77)
T ss_dssp CSCSSBCSSSCCBCSCHHHHHHHHTT
T ss_pred CCCCEECCCCCcccCCHHHHHHHHHH
Confidence 34568999999999999999999875
No 250
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=60.57 E-value=3.9 Score=32.14 Aligned_cols=24 Identities=21% Similarity=0.526 Sum_probs=21.7
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|.|..|++.|.+...|..|.++
T Consensus 28 ~~~~C~~C~~~f~~~~~l~~H~~~ 51 (82)
T 2kmk_A 28 RPYPCQYCGKRFHQKSDMKKHTFI 51 (82)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCeeCCcCChhhCCHHHHHHHHHH
Confidence 459999999999999999999864
No 251
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=60.39 E-value=3.9 Score=32.32 Aligned_cols=25 Identities=24% Similarity=0.546 Sum_probs=22.0
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++.|.+...|..|.+.
T Consensus 13 ~k~~~C~~C~k~f~~~~~L~~H~~~ 37 (77)
T 2ct1_A 13 EKPYECYICHARFTQSGTMKMHILQ 37 (77)
T ss_dssp CCSEECTTTCCEESCHHHHHHHHHH
T ss_pred CCCeECCCcCchhCCHHHHHHHHHH
Confidence 3458999999999999999999863
No 252
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=60.30 E-value=2.7 Score=30.35 Aligned_cols=26 Identities=27% Similarity=0.677 Sum_probs=22.0
Q ss_pred CCceeecc--cccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCL--HCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~--~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|. .|++-|.....|..|.++
T Consensus 15 ~~k~~~C~~~~C~k~F~~~~~L~~H~~~ 42 (47)
T 1ncs_A 15 PDKTFECLFPGCTKTFKRRYNIRSHIQT 42 (47)
T ss_dssp TTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred CCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence 34568995 799999999999999874
No 253
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.95 E-value=3.3 Score=34.81 Aligned_cols=26 Identities=19% Similarity=0.284 Sum_probs=22.5
Q ss_pred CCceeeccccccccc-ChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFI-DEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~-~~~~l~~H~k~ 78 (680)
|...|-|..|++-|. +...|..|+++
T Consensus 21 ~~~~~~C~~C~k~f~~~~~~L~~H~~~ 47 (98)
T 2gqj_A 21 ERGEAVCPTCNVVTRKTLVGLKKHMEV 47 (98)
T ss_dssp TTSCCCCTTTCCCCSSCSHHHHHHHHH
T ss_pred cCCCcCCCCCCCChhhhHHHHHHHHHH
Confidence 346689999999999 99999999865
No 254
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=59.86 E-value=4.1 Score=34.39 Aligned_cols=24 Identities=25% Similarity=0.517 Sum_probs=21.5
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|..|++-|.+...|..|+++
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~ 50 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRL 50 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhh
Confidence 458899999999999999999875
No 255
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=59.78 E-value=40 Score=31.53 Aligned_cols=60 Identities=13% Similarity=0.123 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 189 YKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNVII 255 (680)
Q Consensus 189 ~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~~ 255 (680)
|..|+.+++....+|.++.+.|+.+...++..+-.+....+ ++...++..+..+++.+..
T Consensus 12 ~~~L~~el~~~~~~r~~~~~~i~~A~~~GDlsEnaey~aak-------~~q~~~e~ri~~L~~~L~~ 71 (156)
T 2f23_A 12 YERLMQQLERERERLQEATKILQELMESSDDYDDSGLEAAK-------QEKARIEARIDSLEDILSR 71 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCSCSHHHHHHH-------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhHHHHH-------HHHHHHHHHHHHHHHHHHh
Confidence 56666777777778899999999887666543322233333 3344445555555555443
No 256
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.42 E-value=4 Score=34.35 Aligned_cols=26 Identities=23% Similarity=0.588 Sum_probs=22.7
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|.|..|++.|.+...|..|+++
T Consensus 62 ~~~~~~C~~C~~~f~~~~~l~~H~~~ 87 (110)
T 2csh_A 62 GIKPYECNICAKRFMWRDSFHRHVTS 87 (110)
T ss_dssp CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred CCCCeeCCCCcchhcCHHHHHHHHHH
Confidence 33459999999999999999999876
No 257
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=58.92 E-value=4.8 Score=35.11 Aligned_cols=29 Identities=21% Similarity=0.269 Sum_probs=24.7
Q ss_pred CCCCCCceeecccccccccChHHHHHhhc
Q psy10095 49 FDKPGEAQFYCLHCARHFIDEHALKEHFR 77 (680)
Q Consensus 49 ~dlpG~gq~yC~~C~r~F~~~~~l~~H~k 77 (680)
....|...|-|..|++-|.+...|..|.+
T Consensus 11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r 39 (102)
T 2ghf_A 11 QNKKVEGGYECKYCTFQTPDLNMFTFHVD 39 (102)
T ss_dssp TCCCCCSSEECSSCSCEESCHHHHHHHHH
T ss_pred ccCCCCcCcCCCCCCCccCCHHHHHHHHH
Confidence 35677788999999999999999999975
No 258
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=58.72 E-value=4.1 Score=34.68 Aligned_cols=27 Identities=30% Similarity=0.589 Sum_probs=23.3
Q ss_pred CCCceeecccccccccChHHHHHhhcc
Q psy10095 52 PGEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 52 pG~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|...|-|..|++.|.+...|..|.++
T Consensus 3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~ 29 (124)
T 2dlq_A 3 SGSSGVECPTCHKKFLSKYYLKVHNRK 29 (124)
T ss_dssp CCCSSCCCTTTCCCCSSHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCcCCCHHHHHHHHHh
Confidence 466778999999999999999999863
No 259
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=58.54 E-value=4.2 Score=34.24 Aligned_cols=25 Identities=20% Similarity=0.662 Sum_probs=21.9
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|.| .|++.|.+...|..|++.
T Consensus 7 ~~k~~~C-~C~~~f~~~~~l~~H~~~ 31 (110)
T 2csh_A 7 GDKLYPC-QCGKSFTHKSQRDRHMSM 31 (110)
T ss_dssp CCCCEEC-TTSCEESSHHHHHHHHHH
T ss_pred CCCCEec-cCCCccCCHHHHHHHHHH
Confidence 4556999 899999999999999874
No 260
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=58.18 E-value=38 Score=31.92 Aligned_cols=60 Identities=8% Similarity=0.058 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 188 KYKEFVGVEKITT-ELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNVI 254 (680)
Q Consensus 188 ~~r~l~~~~~~L~-~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~ 254 (680)
-|.+|+.+++.|. .+|-++.+.|+.+...++-.|-.+...- |++...++..+..+++.+.
T Consensus 10 g~~~L~~EL~~L~~~~R~~i~~~i~~Ar~~GDlsENaeY~aa-------k~~q~~~e~rI~~L~~~L~ 70 (158)
T 2p4v_A 10 GYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYN-------KKRLREIDRRVRYLTKCME 70 (158)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHSCTTTCHHHHHH-------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcccchhHHHH-------HHHHHHHHHHHHHHHHHHh
Confidence 3677888888884 4789999999888766653321222222 4455555666666555543
No 261
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=57.68 E-value=4.6 Score=32.41 Aligned_cols=24 Identities=38% Similarity=0.714 Sum_probs=21.5
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|.|..|++.|.+...|..|.++
T Consensus 33 ~~~~C~~C~~~f~~~~~l~~H~~~ 56 (90)
T 1a1h_A 33 KPFQCRICMRNFSRSDHLTTHIRT 56 (90)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHHH
Confidence 458999999999999999999874
No 262
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.52 E-value=4.9 Score=31.71 Aligned_cols=24 Identities=21% Similarity=0.528 Sum_probs=21.4
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|-|..|++-|.+...|..|++.
T Consensus 37 ~~~~C~~C~k~f~~~~~L~~H~~~ 60 (78)
T 2d9h_A 37 LRFPCEFCGKRFEKPDSVAAHRSK 60 (78)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH
T ss_pred cccCCCCCCchhCCHHHHHHHHHH
Confidence 459999999999999999999754
No 263
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=57.04 E-value=5.4 Score=30.99 Aligned_cols=31 Identities=26% Similarity=0.602 Sum_probs=25.6
Q ss_pred CCCCCCCceeecc--cccccccChHHHHHhhcc
Q psy10095 48 DFDKPGEAQFYCL--HCARHFIDEHALKEHFRT 78 (680)
Q Consensus 48 d~dlpG~gq~yC~--~C~r~F~~~~~l~~H~k~ 78 (680)
..--+|...|-|. .|++.|.+...|..|.++
T Consensus 11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~ 43 (73)
T 1f2i_G 11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRI 43 (73)
T ss_dssp SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHH
T ss_pred hccCCCCCccCCcCCCCCCccCCHHHHHHHHHh
Confidence 3345677889997 699999999999999864
No 264
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=56.78 E-value=4.9 Score=32.61 Aligned_cols=25 Identities=28% Similarity=0.509 Sum_probs=22.0
Q ss_pred ceeecccccccccChHHHHHhhccc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRTK 79 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~K 79 (680)
..|-|..|++.|.+..+|..|.++.
T Consensus 30 ~~~~C~~C~k~f~~~~~L~~H~~~h 54 (88)
T 1llm_C 30 KPFACDICGRKFARSDERKRHRDIQ 54 (88)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHH
T ss_pred CCccCCCCCCccCCHHHHHHHHHHh
Confidence 3489999999999999999998753
No 265
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=56.44 E-value=3.8 Score=34.80 Aligned_cols=24 Identities=21% Similarity=0.339 Sum_probs=21.5
Q ss_pred ceeecccccccc-cChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHF-IDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F-~~~~~l~~H~k~ 78 (680)
..|-|..|++.| .+...|..|+++
T Consensus 33 ~~~~C~~C~k~F~~~~~~L~~H~~~ 57 (96)
T 2ctd_A 33 GSVSCPTCQAVGRKTIEGLKKHMEN 57 (96)
T ss_dssp SCEECTTTCSCEESSHHHHHHHHHH
T ss_pred CCcCCCCCCCCcccCHHHHHHHHHH
Confidence 458999999999 999999999864
No 266
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.34 E-value=5.1 Score=30.87 Aligned_cols=25 Identities=20% Similarity=0.507 Sum_probs=20.9
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|. ...|..|.++
T Consensus 7 ~~~~~~C~~C~k~f~-~~~L~~H~~~ 31 (66)
T 2eod_A 7 GKRTQPCTYCTKEFV-FDTIQSHQYQ 31 (66)
T ss_dssp CCCEEECSSSCCEEE-HHHHHHHHHH
T ss_pred CCCCeeccccCCccC-HHHHHHHHHH
Confidence 345688999999999 9999999865
No 267
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.30 E-value=4.4 Score=34.43 Aligned_cols=29 Identities=21% Similarity=0.425 Sum_probs=24.2
Q ss_pred CceeecccccccccChHHHHHhhccchhh
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRTKVHK 82 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~K~HK 82 (680)
.-.|.|..|++.|.+..+|..|+++.-|.
T Consensus 78 ~~~~~C~~C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 78 QKVLKCMYCGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp CSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred CcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence 34589999999999999999998765443
No 268
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=55.78 E-value=4.2 Score=33.93 Aligned_cols=23 Identities=26% Similarity=0.585 Sum_probs=19.3
Q ss_pred ceeecccccccccChHHHHHhhc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFR 77 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k 77 (680)
..|.|..|++.|.+...|..|++
T Consensus 72 ~~~~C~~C~~~f~~~~~L~~H~~ 94 (106)
T 2ee8_A 72 KPFKCQECGKGFCQSRTLAVHKT 94 (106)
T ss_dssp CTTSCSSSCCCCSSHHHHHHHHH
T ss_pred CCeECCCcCCcccCHHHHHHHHH
Confidence 34889999999999999999975
No 269
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=55.30 E-value=5.4 Score=31.67 Aligned_cols=24 Identities=29% Similarity=0.778 Sum_probs=20.8
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|..|++.|.+...|..|.++
T Consensus 14 k~~~C~~C~~~f~~~~~l~~H~~~ 37 (86)
T 1x6h_A 14 KPYACSHCDKTFRQKQLLDMHFKR 37 (86)
T ss_dssp CCEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCcCCCCCCccCCHHHHHHHHHH
Confidence 448899999999999999999864
No 270
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=55.12 E-value=4.8 Score=32.01 Aligned_cols=24 Identities=25% Similarity=0.660 Sum_probs=21.7
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|-|..|++.|.+...|..|+++
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~ 69 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADN 69 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHH
T ss_pred cceECCCCCChhCCHHHHHHHHHH
Confidence 358999999999999999999865
No 271
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=55.12 E-value=3.9 Score=35.58 Aligned_cols=25 Identities=36% Similarity=0.607 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|-|..|++-|.+...|..|.++
T Consensus 72 ~~~~~C~~C~k~f~~~~~l~~H~~~ 96 (129)
T 2wbt_A 72 ISQFVCPLCLMPFSSSVSLKQHIRY 96 (129)
T ss_dssp HCSEECTTTCCEESSHHHHHHHHHH
T ss_pred CCCeECCCCCcccCCHhHHHHHHHH
Confidence 3458999999999999999999875
No 272
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.75 E-value=4.1 Score=34.21 Aligned_cols=23 Identities=26% Similarity=0.602 Sum_probs=21.1
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|-|..|++-|.+...|..|+++
T Consensus 54 ~~~C~~C~k~F~~~~~L~~H~~~ 76 (98)
T 2gqj_A 54 ALKCQHCRKQFKSKAGLNYHTMA 76 (98)
T ss_dssp HHSCSSSCCCCSCHHHHHHHHHH
T ss_pred CEECCCCCCccCCHHHHHHHHHH
Confidence 58999999999999999999864
No 273
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=54.69 E-value=5.4 Score=33.54 Aligned_cols=25 Identities=24% Similarity=0.563 Sum_probs=21.2
Q ss_pred CCceeeccc--ccccccChHHHHHhhc
Q psy10095 53 GEAQFYCLH--CARHFIDEHALKEHFR 77 (680)
Q Consensus 53 G~gq~yC~~--C~r~F~~~~~l~~H~k 77 (680)
|---|-|.+ |+|.|.....|..|++
T Consensus 24 GEKPYkC~~~~CgKaFsr~s~L~~H~r 50 (73)
T 1x3c_A 24 PYRPYRCVHQGCFAAFTIQQNLILHYQ 50 (73)
T ss_dssp SSCSCBCCSTTCCCBCSSHHHHHHHHH
T ss_pred CCCCeECCCCCcChhHcCHHHHHHHhh
Confidence 444589987 9999999999999974
No 274
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=53.77 E-value=5.6 Score=33.58 Aligned_cols=25 Identities=40% Similarity=0.684 Sum_probs=21.4
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|.|..|++.|.+...|..|+++
T Consensus 64 ~~~~~C~~C~~~f~~~~~l~~H~~~ 88 (119)
T 2jp9_A 64 VKPFQCKTCQRKFSRSDHLKTHTRT 88 (119)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHH
T ss_pred CCCccCCccCchhCCHHHHHHHHHH
Confidence 3458999999999999999999864
No 275
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=53.68 E-value=5.1 Score=32.48 Aligned_cols=23 Identities=39% Similarity=0.751 Sum_probs=21.1
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|-|..|++.|.+..+|..|.++
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~ 25 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRT 25 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH
Confidence 38899999999999999999875
No 276
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=53.48 E-value=6 Score=33.33 Aligned_cols=23 Identities=26% Similarity=0.563 Sum_probs=20.8
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|-|..|++-|.....|..|.+.
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~ 78 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINK 78 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHT
T ss_pred ccCCCCCCCEeCCHHHHHHhCcc
Confidence 49999999999999999999753
No 277
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=52.43 E-value=6.5 Score=33.03 Aligned_cols=26 Identities=15% Similarity=0.272 Sum_probs=22.9
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|.|..|++.|.+...|..|+++
T Consensus 13 ~~~~~~C~~C~~~f~~~~~l~~H~~~ 38 (107)
T 1wjp_A 13 NKEVYQCRLCNAKLSSLLEQGSHERL 38 (107)
T ss_dssp CCCCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCcCeECCCCCCccCCHHHHHHHHHH
Confidence 44568999999999999999999976
No 278
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.14 E-value=6.6 Score=33.27 Aligned_cols=26 Identities=23% Similarity=0.538 Sum_probs=23.0
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|.++
T Consensus 16 ~~~~~~C~~C~k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 16 GASKFRCKDCSAAYDTLVELTVHMNE 41 (115)
T ss_dssp CCCSEEBSSSSCEESSHHHHHHHHHH
T ss_pred CCCCEECCccCchhcCHHHHHHHHHH
Confidence 34559999999999999999999985
No 279
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=51.96 E-value=6.2 Score=32.04 Aligned_cols=24 Identities=21% Similarity=0.533 Sum_probs=21.5
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|-|..|++.|.+...|..|+++
T Consensus 34 ~~~~C~~C~~~f~~~~~l~~H~~~ 57 (95)
T 2yt9_A 34 KPYSCPVCGLRFKRKDRMSYHVRS 57 (95)
T ss_dssp CSEECSSSCCEESCHHHHHHHHHH
T ss_pred CCCcCCCCCCccCCHHHHHHHHHH
Confidence 458999999999999999999864
No 280
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.70 E-value=4.6 Score=31.11 Aligned_cols=26 Identities=15% Similarity=0.369 Sum_probs=22.5
Q ss_pred CCceeecc-cccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCL-HCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~-~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|. .|++.|.....|..|+++
T Consensus 33 ~~~p~~C~~~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 33 PRLPVACPNQCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp SSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred CCcCccCCcccCcccccHHHHHHHHHh
Confidence 34458999 999999999999999874
No 281
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=51.68 E-value=5.4 Score=36.02 Aligned_cols=26 Identities=27% Similarity=0.775 Sum_probs=22.8
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|--.|-|..|++-|.+..+|..|+++
T Consensus 19 Gek~y~C~~C~k~F~~~~~L~~H~~~ 44 (133)
T 2lt7_A 19 GRVYYICIVCKRSYVCLTSLRRHFNI 44 (133)
T ss_dssp TEEEEEETTTCCEESCHHHHHHHHHH
T ss_pred CCcCeECCCCCCCcCCHHHHHHHHHH
Confidence 66679999999999999999999863
No 282
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=51.10 E-value=6.3 Score=28.84 Aligned_cols=23 Identities=22% Similarity=0.375 Sum_probs=21.0
Q ss_pred ceeecccccccccChHHHHHhhc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFR 77 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k 77 (680)
..+||-.|+--|.+-.++..|.+
T Consensus 7 ~~~~C~~C~IsF~~l~ty~aHKk 29 (36)
T 1fu9_A 7 MKKYCSTCDISFNYVKTYLAHKQ 29 (36)
T ss_dssp CCSEETTTTEECSSHHHHHHHHH
T ss_pred CcCeeccccceehhhHHHhhhhe
Confidence 46899999999999999999975
No 283
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=50.67 E-value=14 Score=39.27 Aligned_cols=109 Identities=15% Similarity=0.221 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHcCCceEEeecCCCCCCcccccceeeeeeecCCCceeeeeecCcchhhhHHHHHHHHHHHHhhhcccc
Q psy10095 463 QNIQSLLKSVMDKLNMKYRICKAPADVLHTSESHRLEYQVYSYSLNSWVTCMDLNAKVYIQIVFFIQEMSWMKKLAEKII 542 (680)
Q Consensus 463 eeml~~~e~il~~L~LpyRVv~m~tgdLg~~a~kkyDIEvW~P~~~~Y~EisS~Sn~~~~q~~~~~~e~~~~~k~~~~l~ 542 (680)
++....-..++.+||+|.|+|.- ..--+=+|||.|+.++|.-|=.|.+..+-+..+ +..|.++++-=+.
T Consensus 185 ~e~A~lF~~llRalGi~aR~V~~--------~~~H~W~EV~~~~~~rWv~vDp~~~~id~P~~y---e~gw~k~msYVIA 253 (335)
T 1x3z_A 185 GEWCNLFTLILKSFGLDVRYVWN--------REDHVWCEYFSNFLNRWVHVDSCEQSFDQPYIY---SINWNKKMSYCIA 253 (335)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEE--------TTTEEEEEEEETTTTEEEEEETTTTEESCTHHH---HTTSCCCBCCEEE
T ss_pred HHHHHHHHHHHHHCCCCeEEEec--------CCCcEEEEEEECCCCCEEEECCCCCccCCCcee---ecCCCCceEEEEE
Confidence 44555667788999999999942 122244899999999999999999876665333 3456666655566
Q ss_pred ccccCCCCcccchHHHHHHHHHHhhhcCCcccchhhhhhchhHHHHHHHHhhhcccc
Q psy10095 543 PNIDENIGMEYMSFLKRTADRLCMKWNRSYAQVLGWLRTKCQISIIRTISMRIRGTR 599 (680)
Q Consensus 543 ~s~dG~~g~e~~~F~krLA~~Ls~Kw~~~ys~~i~wir~~~sfailr~~~~c~~g~r 599 (680)
|+.||.. -. ..|.+.+ .. + -|.+++=..+..++.=+++.+
T Consensus 254 Fs~dgv~-DV--------T~RY~~~-----~~-l--rR~rv~e~wl~~~L~~l~~~~ 293 (335)
T 1x3z_A 254 FGKDGVV-DV--------SKRYILQ-----NE-L--PRDQIKEEDLKFLCQFITKRL 293 (335)
T ss_dssp EETTEEE-EC--------HHHHCSS-----SB-C--CCCSSCHHHHHHHHHHHHHHH
T ss_pred EcCCCCE-EC--------HHHhCcC-----Cc-c--ccccCCHHHHHHHHHHHHHHH
Confidence 6766522 22 3333333 11 2 455556566666665554443
No 284
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=50.64 E-value=8 Score=33.05 Aligned_cols=25 Identities=24% Similarity=0.561 Sum_probs=22.1
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
...|.|..|++.|.+...|..|.++
T Consensus 32 ~~~~~C~~C~~~f~~~~~l~~H~~~ 56 (124)
T 1ubd_C 32 PRVHVCAECGKAFVESSKLKRHQLV 56 (124)
T ss_dssp CCCEECTTTCCEESSHHHHHHHGGG
T ss_pred CCCeECCCCCchhCCHHHHHHHHHH
Confidence 3569999999999999999999874
No 285
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=50.58 E-value=6.2 Score=33.14 Aligned_cols=24 Identities=25% Similarity=0.519 Sum_probs=20.9
Q ss_pred CceeecccccccccChHHHHHhhc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFR 77 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k 77 (680)
...|.|..|++.|.+...|..|++
T Consensus 67 ~~~~~C~~C~~~f~~~~~L~~H~~ 90 (107)
T 1wjp_A 67 YKKLTCLECMRTFKSSFSIWRHQV 90 (107)
T ss_dssp TGGGEEGGGTEECSSHHHHHHHHH
T ss_pred CCCccCccccchhCCHHHHHHHHH
Confidence 345899999999999999999986
No 286
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=50.43 E-value=8.4 Score=32.02 Aligned_cols=24 Identities=21% Similarity=0.497 Sum_probs=21.2
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|-|..|++.|.+...|..|+++
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~ 67 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYI 67 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGG
T ss_pred CCcCCCCccchhCCHHHHHHHHHH
Confidence 458999999999999999999864
No 287
>3ig2_A Phenylalanyl-tRNA synthetase beta chain; phers, MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.09A {Bacteroides fragilis}
Probab=50.20 E-value=30 Score=33.77 Aligned_cols=129 Identities=19% Similarity=0.259 Sum_probs=66.8
Q ss_pred hCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhhhhcccccCCCCCCceE
Q psy10095 329 KHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHTNHSVNVKDLPVKY 408 (680)
Q Consensus 329 ~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~~e~l~~~~LPlKy 408 (680)
..||+++.+-.|+..+..+..+..|. .+...+.+. +.+ ....-+..|+|+ . |-++-.|. .-..-++++
T Consensus 19 ~~G~~Evitysf~~~~~~~~~~~~~~--~~~v~l~NP---ls~-e~~vmRtsLlpg--L--L~~~~~N~--~r~~~~v~l 86 (213)
T 3ig2_A 19 GCGFNEILNNSLTRAAYYDGLESYPS--KNLVMLLNP---LSA-DLNCMRQTLLFG--G--LESIAHNA--NRKNADLKF 86 (213)
T ss_dssp HTTCEECCCCSEECGGGGTTCSSSCG--GGCEEBSSG---GGC-SCCEECSCSHHH--H--HHHHHHC--------CCEE
T ss_pred HCCCeEEeccccCCHHHHHhhcccCc--CCeEEEeCC---cch-hHHHHHHHhHHH--H--HHHHHHHh--cCCCCCeeE
Confidence 36999999999999987766653332 234555531 100 000012334432 1 12222222 122335999
Q ss_pred eeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCC-hhH------HHHHHHHHHHHHHHHHHHcCCc
Q psy10095 409 VTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNN-HEN------LCKEFQNIQSLLKSVMDKLNMK 479 (680)
Q Consensus 409 ~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~-pe~------S~~~~eeml~~~e~il~~L~Lp 479 (680)
+-+|++|++.+ +....+.. +-..+|..++-.+. |+. .+. ...-|.++...++.++..||++
T Consensus 87 FEiG~Vf~~~~--------~~~~~~~~-~~~~~e~~~la~~~-~G~~~~~~w~~~~~~~df~dlKg~ve~ll~~lg~~ 154 (213)
T 3ig2_A 87 FEFGNCYHFDA--------EKKNPEKV-LAPYSEDYHLGLWV-TGKMVSNSWAHADENTSVYELKAYVENIFKRLGLD 154 (213)
T ss_dssp EEEEEEEEECC-------------------CEEEEEEEEEEE-EEEECCSCC----CHHHHHHHHHHHHHHHHHTTBC
T ss_pred EEeeeEEecCc--------cccccccc-ccccchhHEEEEEE-ECCCccccCCCCCCCcCHHHHHHHHHHHHHHhCCC
Confidence 99999998741 11100110 00126766666543 321 111 1234888999999999999997
No 288
>3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, phenylalanyl-tRNA SYNT beta subunit, structural genomics, PSI-2; HET: TAM; 2.44A {Porphyromonas gingivalis}
Probab=50.20 E-value=47 Score=32.31 Aligned_cols=128 Identities=15% Similarity=0.202 Sum_probs=67.2
Q ss_pred hCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhh-hhhhcccccCCCCCCce
Q psy10095 329 KHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMF-CAYHTNHSVNVKDLPVK 407 (680)
Q Consensus 329 ~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl-~~~~~~e~l~~~~LPlK 407 (680)
..||+++.+-.|+..+..+..++.|. .+...+.+.- ..++-..-|+=..+| -++-.|. .-..-+++
T Consensus 19 ~~G~~Evitysf~s~~~~~~~~~~~~--~~~v~l~NPl---------s~e~~vmRtsLlpgLL~~~~~N~--~r~~~~~~ 85 (213)
T 3ica_A 19 GAGFNEILNNSLTAGSYYEGLKSHPR--EMAVELMNPL---------SQELNCMRQTLLFGGLETLSHNL--RRKHLSLY 85 (213)
T ss_dssp HTTCEECCCCSEEEGGGGTTCSSSCG--GGCCBCSSBS---------CSSEEEECSSSHHHHHHHHHHHH--TTTCSEEE
T ss_pred HCCCceeeeccCCCHHHHhhhcccCc--CCeEEecCCc---------cHHHHHHHHHhHHHHHHHHHHHH--cCCCCCee
Confidence 36999999999999987766653332 1234444210 012222222211112 1222222 11222499
Q ss_pred EeeeCcccCCCccccccccccCCCCC-cccchhhhccceEEEEEecCChhHHHH------HHHHHHHHHHHHHHHcCCc
Q psy10095 408 YVTSGKQYGFHNLLCENTLKTSKHSR-VENLYNSIQREKVNLFVGTNNHENLCK------EFQNIQSLLKSVMDKLNMK 479 (680)
Q Consensus 408 y~a~s~cyr~Ea~~CFR~EaGs~G~d-trGL~RvHQF~KVE~f~~~~~pe~S~~------~~eeml~~~e~il~~L~Lp 479 (680)
++-+|++|+++. +....+ ..+ ...|..++-.+..-...+.+|. -|.++...++.++..||++
T Consensus 86 lFEiG~Vf~~~~--------~~~~~~~~~~--~~~e~~~la~~~~G~~~~~~w~~~~~~~df~d~Kg~ve~ll~~lgi~ 154 (213)
T 3ica_A 86 LFEWGKCYRFHA--------AKRTDETPLA--AYAEDDRLGIWICGQRVHNSWAHPEEPTSVFELKAVVEQVLCRVGIE 154 (213)
T ss_dssp EEEEEEEEEEEC--------CCC--CCSSC--EEEEEEEEEEEEEEBCCC-----CCCBCCHHHHHHHHHHHHHHTTCC
T ss_pred EEEeeeEEecCC--------cccccccccc--ccchhhEEEEEEeCCCCcccCCCCCCCcCHHHHHHHHHHHHHHhCCC
Confidence 999999998741 111011 111 1256666655432212334442 3889999999999999997
No 289
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=50.12 E-value=55 Score=30.74 Aligned_cols=60 Identities=3% Similarity=-0.072 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 188 KYKEFVGVEKITTE-LEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNVI 254 (680)
Q Consensus 188 ~~r~l~~~~~~L~~-~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~ 254 (680)
-|.+|+.+++.|+. +|-++.+.|+.+...++-. ++.+ -..-|++...++..+..+++.+.
T Consensus 10 g~~~L~~El~~L~~~~rp~i~~~i~~A~~~gDls--ENae-----Y~aak~~q~~~e~ri~~Le~~L~ 70 (158)
T 1grj_A 10 GAEKLREELDFLKSVRRPEIIAAIAEAREHGDLK--ENAE-----YHAAREQQGFCEGRIKDIEAKLS 70 (158)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHTTCCGG--GCHH-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccchhhHhhHHHHHhccccc--ccch-----hhhHHHHHHHHHHHHHHHHHHHh
Confidence 36778888888988 7899999998876554421 1111 11223444455555555555544
No 290
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=49.60 E-value=5.1 Score=39.18 Aligned_cols=36 Identities=36% Similarity=0.725 Sum_probs=25.8
Q ss_pred eee-cccccccccChHHHHHhhccchhhhhhhhcccCCCC
Q psy10095 56 QFY-CLHCARHFIDEHALKEHFRTKVHKRRLKALEVEPYT 94 (680)
Q Consensus 56 q~y-C~~C~r~F~~~~~l~~H~k~K~HKrr~K~l~~~pyt 94 (680)
||| |-+|+|| +|-.++..|+|. |--.|++..|+-|.
T Consensus 153 QFYKCe~CgKY-vDId~~~~Hlk~--Hg~~v~e~~ee~YE 189 (226)
T 2czr_A 153 QFYKCEECGKY-VDIENLEAHLRE--HGIKLHEKSEEHYE 189 (226)
T ss_dssp EEEECTTTCCE-EEGGGHHHHHHT--TTCCGGGCSEEECE
T ss_pred EEEehhhcCce-ecHHHHHHHHHH--cCcchhhcchhheE
Confidence 554 9999998 568899999875 44456666555554
No 291
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.99 E-value=10 Score=29.44 Aligned_cols=25 Identities=24% Similarity=0.462 Sum_probs=23.0
Q ss_pred CCceeecccccccccChHHHHHhhc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFR 77 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k 77 (680)
-.|.|-|.-|++.|.-..+|..|+|
T Consensus 9 ~~~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 9 DGGRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp CSSCCCCTTTCCCCSSHHHHHHHHH
T ss_pred cCCceeCCcccccccchHHHHhhhh
Confidence 3489999999999999999999987
No 292
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=48.89 E-value=7.3 Score=33.01 Aligned_cols=23 Identities=26% Similarity=0.622 Sum_probs=20.4
Q ss_pred ceeecccccccccChHHHHHh-hc
Q psy10095 55 AQFYCLHCARHFIDEHALKEH-FR 77 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H-~k 77 (680)
..|-|.+|++-|.....|..| ++
T Consensus 61 k~~~C~~Cgk~F~~~~~L~~H~~~ 84 (96)
T 2ctd_A 61 EMFTCHHCGKQLRSLAGMKYHVMA 84 (96)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CCeECCCCCCeeCCHHHHHHHhHH
Confidence 348899999999999999999 54
No 293
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=48.55 E-value=8 Score=32.77 Aligned_cols=26 Identities=27% Similarity=0.521 Sum_probs=21.8
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|-|..|++.|.+...|..|+++
T Consensus 63 ~~~~~~C~~C~~~f~~~~~l~~H~~~ 88 (124)
T 2dlq_A 63 SEQVFTCSVCQETFRRRMELRLHMVS 88 (124)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCCeECCCCCCccCCHHHHHHHHHH
Confidence 34568999999999999999999864
No 294
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=48.13 E-value=1.3e+02 Score=30.18 Aligned_cols=30 Identities=13% Similarity=0.176 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 224 QLEKKYLERKQLKAEIKKFDSFMLDYQRNV 253 (680)
Q Consensus 224 e~e~l~~~~k~Lk~elk~Le~~l~~le~~l 253 (680)
+.+.+..++..++.++..+++.+.++.+++
T Consensus 91 E~~aL~kEie~~~~~i~~lE~eile~~e~i 120 (256)
T 3na7_A 91 ELRSLNIEEDIAKERSNQANREIENLQNEI 120 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555566666655555555555444
No 295
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=48.11 E-value=8.2 Score=30.23 Aligned_cols=23 Identities=35% Similarity=0.723 Sum_probs=20.9
Q ss_pred eeeccc--ccccccChHHHHHhhcc
Q psy10095 56 QFYCLH--CARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~--C~r~F~~~~~l~~H~k~ 78 (680)
.|-|.. |++.|.+..+|..|+++
T Consensus 38 ~~~C~~~~C~k~f~~~~~L~~H~~~ 62 (79)
T 2dlk_A 38 SFSCPEPACGKSFNFKKHLKEHMKL 62 (79)
T ss_dssp CEECSCTTTCCEESSHHHHHHHHHH
T ss_pred CeECCCCCCcCccCCHHHHHHHHHH
Confidence 489999 99999999999999874
No 296
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=47.92 E-value=8.7 Score=30.65 Aligned_cols=25 Identities=32% Similarity=0.622 Sum_probs=21.3
Q ss_pred Cceeeccc--ccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLH--CARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~--C~r~F~~~~~l~~H~k~ 78 (680)
-+.|.|.. |++.|.+..+|..|.++
T Consensus 3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~ 29 (89)
T 2wbs_A 3 TATHTCDYAGCGKTYTKSSHLKAHLRT 29 (89)
T ss_dssp CCCEECCSTTTCCEESSHHHHHHHHTT
T ss_pred CCCeeCCCCCCCCcCCCHHHHHHHHHh
Confidence 46788988 99999999999999874
No 297
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=47.73 E-value=8.7 Score=32.31 Aligned_cols=26 Identities=19% Similarity=0.553 Sum_probs=22.6
Q ss_pred CCceeecccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|.-.|-|..|++-|.....|..|.++
T Consensus 22 ~~kpy~C~~C~k~F~~~~~L~~H~~~ 47 (88)
T 1x6f_A 22 QNSTYQCKHCDSKLQSTAELTSHLNI 47 (88)
T ss_dssp CCSCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCCCcCCCCCCEeCCHHHHHHHHHH
Confidence 33458999999999999999999875
No 298
>1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B*
Probab=46.86 E-value=49 Score=38.88 Aligned_cols=130 Identities=11% Similarity=0.138 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHhhCCcEeeccCcccchHHHHhhcCCCCCCCCceEeecCCCccccccccCCCceeeccchhhhhhhhhc
Q psy10095 316 YLIPIILKDYFTVKHNFMPFTNTDLCKGVIVEGYGDHYLSPHDNMVLVNNENDLSEIGYEERRNHLVGSAHMSMFCAYHT 395 (680)
Q Consensus 316 ~ALi~y~ld~~~~~~Gf~~i~~P~~Vr~~v~~g~G~~p~~~~~~~~i~~~~~~~~~~~~~~~~l~LigTaeevpl~~~~~ 395 (680)
+.+.+...+.+. ..||+++.+-.|+..+.... +|.+ .+.+++.+.-++ + ...-+..|+|+- |-++-.
T Consensus 492 ~~~~~~ir~~L~-~~Gf~Evitysfvs~~~~~~---l~~~-~~~v~L~NPis~-d---~svLRtsLlpgL----L~~l~~ 558 (785)
T 1b7y_B 492 YRKEQRLREVLS-GLGFQEVYTYSFMDPEDARR---FRLD-PPRLLLLNPLAP-E---KAALRTHLFPGL----VRVLKE 558 (785)
T ss_dssp HHHHHHHHHHHH-HHTCEECCCCSEECTTHHHH---TTCC-CCSCEESSCSST-T---SSEECSCSHHHH----HHHHHH
T ss_pred HHHHHHHHHHHH-HCCCEEEecCcccCHHHHHh---cCCC-CCeEEEcCCCch-h---hhhhhhhhHHHH----HHHHHH
Confidence 334444444343 35999999999998876633 2432 344677642110 0 000122344321 222222
Q ss_pred ccccCCC-CCCceEeeeCcccCCCccccccccccCCCCCcccchhhhccceEEEEEecCChhHHH-----HHHHHHHHHH
Q psy10095 396 NHSVNVK-DLPVKYVTSGKQYGFHNLLCENTLKTSKHSRVENLYNSIQREKVNLFVGTNNHENLC-----KEFQNIQSLL 469 (680)
Q Consensus 396 ~e~l~~~-~LPlKy~a~s~cyr~Ea~~CFR~EaGs~G~dtrGL~RvHQF~KVE~f~~~~~pe~S~-----~~~eeml~~~ 469 (680)
|. .-. ..|++++-+|++|+ + +||.+++.+..-...+.+| .-|.++...+
T Consensus 559 N~--~r~~~~~vrlFEiG~Vf~-~----------------------~e~~~lagl~~G~~~~~~w~~~~~vdf~dlKg~l 613 (785)
T 1b7y_B 559 NL--DLDRPERALLFEVGRVFR-E----------------------REETHLAGLLFGEGVGLPWAKERLSGYFLLKGYL 613 (785)
T ss_dssp HH--HHSCCSCEEEEEEEEEES-S----------------------SEEEEEEEEEESSCBSCSSSSCCBCSHHHHHHHH
T ss_pred Hh--hcCCCCCeEEEEEeeeec-c----------------------ChhhEEEEEEECCCcccccCccCCcCHHHHHHHH
Confidence 21 123 45899999999884 1 6898888877552222222 2478899999
Q ss_pred HHHHHHcCCceEEe
Q psy10095 470 KSVMDKLNMKYRIC 483 (680)
Q Consensus 470 e~il~~L~LpyRVv 483 (680)
+.++..||+.+++.
T Consensus 614 e~ll~~lgi~~~~~ 627 (785)
T 1b7y_B 614 EALFARLGLAFRVE 627 (785)
T ss_dssp HHHHHHHTCCCEEE
T ss_pred HHHHHHcCCceEEe
Confidence 99999999977755
No 299
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=46.53 E-value=2e+02 Score=27.57 Aligned_cols=40 Identities=8% Similarity=-0.016 Sum_probs=21.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10095 176 DISEFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLV 215 (680)
Q Consensus 176 ~~dld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~ 215 (680)
+++.++-.++.+.+.+...+...|+.+......++..+..
T Consensus 67 nLT~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL~~ 106 (175)
T 3lay_A 67 PLTTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLT 106 (175)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555555555555555555565666555555555555543
No 300
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=46.36 E-value=8.4 Score=34.75 Aligned_cols=23 Identities=26% Similarity=0.837 Sum_probs=15.5
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|-|..|++-|.+...|..|+++
T Consensus 78 ~~~C~~C~k~F~~~~~L~~H~~~ 100 (133)
T 2lt7_A 78 RYQCLACGKSFINYQFMSSHIKS 100 (133)
T ss_dssp CEEESSSCCEESSHHHHHHHHHH
T ss_pred cccCCCCCCCcCCHHHHHHHhHH
Confidence 36677777777777777777654
No 301
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=46.29 E-value=34 Score=26.84 Aligned_cols=33 Identities=12% Similarity=0.092 Sum_probs=28.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 222 PSQLEKKYLERKQLKAEIKKFDSFMLDYQRNVI 254 (680)
Q Consensus 222 ~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~ 254 (680)
.++.+.|+.+..+|+.++..|.++..++..++.
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567899999999999999999999998887764
No 302
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.76 E-value=6.9 Score=31.85 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=20.4
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|..|++-|.+...|..|+++
T Consensus 63 ~~C~~C~k~f~~~~~L~~H~~~ 84 (95)
T 2ej4_A 63 EECPREGKSFKAKYKLVNHIRV 84 (95)
T ss_dssp TTCSSTTCCCSSHHHHHHHHHH
T ss_pred cCCCCCCcccCCHHHHHHHHHh
Confidence 7899999999999999999864
No 303
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=45.59 E-value=10 Score=29.27 Aligned_cols=24 Identities=38% Similarity=0.707 Sum_probs=20.6
Q ss_pred ceeeccc--ccccccChHHHHHhhcc
Q psy10095 55 AQFYCLH--CARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~--C~r~F~~~~~l~~H~k~ 78 (680)
-.|-|.. |++-|.....|..|.++
T Consensus 46 ~~~~C~~~~C~k~f~~~~~l~~H~~~ 71 (72)
T 2epa_A 46 KPFSCSWKGCERRFARSDELSRHRRT 71 (72)
T ss_dssp CSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred CCccCCCCCCCcccCCHHHHHhHhhc
Confidence 3489964 99999999999999864
No 304
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=44.46 E-value=1.4e+02 Score=25.25 Aligned_cols=66 Identities=8% Similarity=0.062 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 180 FDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNV 253 (680)
Q Consensus 180 d~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l 253 (680)
.+|-.|..++.++....+.|.--+|.+=..+-++- .+.+.++.+...+..-...++..+.++++++
T Consensus 9 kevEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt--------~E~e~l~~El~s~~~~~~r~~~ri~elEeEl 74 (77)
T 2w83_C 9 REVENLILENTQLLETKNALNIVKNDLIAKVDELT--------CEKDVLQGELEAVKQAKLKLEEKNRELEEEL 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666666666666666666666555554441 1334444455445444445555555554443
No 305
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=44.11 E-value=10 Score=29.72 Aligned_cols=23 Identities=30% Similarity=0.641 Sum_probs=20.4
Q ss_pred eeeccc--ccccccChHHHHHhhcc
Q psy10095 56 QFYCLH--CARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~--C~r~F~~~~~l~~H~k~ 78 (680)
.|-|.. |++.|.+...|..|+++
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~ 55 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKV 55 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHH
Confidence 488988 99999999999999854
No 306
>3d5a_X RF1, peptide chain release factor 1; ribosome, ribonucleoprotein, ribosomal protein, RNA-binding, binding, metal-binding, zinc-finger; 3.21A {Thermus thermophilus} PDB: 2b64_Y 3d5c_X 3mr8_V 3ms0_V
Probab=44.02 E-value=1.5e+02 Score=31.69 Aligned_cols=93 Identities=15% Similarity=0.079 Sum_probs=51.1
Q ss_pred cCHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHH
Q psy10095 161 ENEDLIVNQLKQRRIDISEFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIK 240 (680)
Q Consensus 161 ~n~e~v~~~l~~R~~~~dld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk 240 (680)
+..+.+.+.+..=.+--|.+...++-.++..+...++..+..+..+.+. ..+..-.. + .+ ....++++++
T Consensus 10 ~r~~el~~~~~~p~~~~d~~~~~~~~ke~~~l~~~v~~~~~~~~~~~~~-~~~~el~~-D--~e------~~~~a~~e~~ 79 (354)
T 3d5a_X 10 EEYRELEALLSDPEVLKDKGRYQSLSRRYAEMGEVIGLIREYRKVLEDL-EQAESLLD-D--PE------LKEMAKAERE 79 (354)
T ss_dssp HHHHHHHHHTTSTTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTSTT-C--HH------HHHHHHHHHH
T ss_pred HHHHHHHHHhcCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-C--HH------HHHHHHHHHH
Confidence 3344444444332322356777777777777777776666665544332 22211101 1 11 2234567788
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCC
Q psy10095 241 KFDSFMLDYQRNVIIKVLKLPNYLD 265 (680)
Q Consensus 241 ~Le~~l~~le~~l~~~~l~LPN~~h 265 (680)
.++..+.+++.++..+ -||+-++
T Consensus 80 ~l~~~~~~le~~l~~l--Llp~~~~ 102 (354)
T 3d5a_X 80 ALLARKEALEKELERH--LLPKDPM 102 (354)
T ss_dssp HHHHHHHHHHHHHHHH--HSTTCCC
T ss_pred HHHHHHHHHHHHHHHh--cCCCCCc
Confidence 8888888888777643 4576554
No 307
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=43.59 E-value=11 Score=35.02 Aligned_cols=23 Identities=35% Similarity=0.703 Sum_probs=16.2
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.|.|..|++.|.+..+|..|+++
T Consensus 161 ~~~C~~C~~~f~~~~~L~~H~~~ 183 (190)
T 2i13_A 161 PYKCPECGKSFSRRDALNVHQRT 183 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHh
Confidence 46777777777777777777654
No 308
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=43.54 E-value=11 Score=31.82 Aligned_cols=24 Identities=25% Similarity=0.596 Sum_probs=21.3
Q ss_pred ceeec--ccccccccChHHHHHhhcc
Q psy10095 55 AQFYC--LHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC--~~C~r~F~~~~~l~~H~k~ 78 (680)
..|.| ..|++.|.+...|..|+++
T Consensus 93 ~~~~C~~~~C~~~f~~~~~L~~H~~~ 118 (119)
T 2jp9_A 93 KPFSCRWPSCQKKFARSDELVRHHNM 118 (119)
T ss_dssp CCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred CCeeCCCCCCccccCCHHHHHHHHhc
Confidence 44899 7999999999999999864
No 309
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=43.24 E-value=1.7e+02 Score=26.41 Aligned_cols=33 Identities=9% Similarity=0.019 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 180 FDFTQMREKYKEFVGVEKITTELEHKLVDLEQY 212 (680)
Q Consensus 180 d~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~ 212 (680)
|++..|-...+++..++..+.+.|..+......
T Consensus 6 ~~~~~lq~~~~ql~~qL~k~~~~r~~Le~~w~~ 38 (112)
T 1x79_B 6 DQVKKLQLMLRQANDQLEKTMKDKQELEDFIKQ 38 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555556666666777777777777776654
No 310
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=42.40 E-value=1.6e+02 Score=25.58 Aligned_cols=34 Identities=12% Similarity=-0.166 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 180 FDFTQMREKYKEFVGVEKITTELEHKLVDLEQYL 213 (680)
Q Consensus 180 d~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~ 213 (680)
|....+-...+.......++..+-..+++.|+.+
T Consensus 23 drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~l 56 (101)
T 3u1c_A 23 DRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVT 56 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4444444445555555555555555555555543
No 311
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=42.32 E-value=9.5 Score=33.03 Aligned_cols=22 Identities=18% Similarity=0.436 Sum_probs=20.7
Q ss_pred eecccccccccChHHHHHhhcc
Q psy10095 57 FYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
|-|..|++-|.+..+|..|.++
T Consensus 101 ~~C~~C~k~f~~~~~l~~H~~~ 122 (129)
T 2wbt_A 101 KVCPVCKKEFTSTDSALDHVCK 122 (129)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCCCCCCcccCCHHHHHHHHHH
Confidence 8999999999999999999875
No 312
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=42.25 E-value=1.6e+02 Score=25.42 Aligned_cols=50 Identities=14% Similarity=-0.004 Sum_probs=24.2
Q ss_pred HHHHHHHHhcCCCCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 164 DLIVNQLKQRRIDIS--EFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYL 213 (680)
Q Consensus 164 e~v~~~l~~R~~~~d--ld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~ 213 (680)
|.|++.+..=..+.| +|....+-.+.+........+..+-..+++.|+.+
T Consensus 5 d~iKkKm~~lk~e~e~a~d~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~l 56 (101)
T 3u59_A 5 EAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGT 56 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 455555443222221 34444444555555555555555555555555543
No 313
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=41.16 E-value=1.7e+02 Score=25.16 Aligned_cols=78 Identities=6% Similarity=0.012 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-------------hhh--------HHHHHHHHHHHHHHH
Q psy10095 181 DFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLE-------------PSQ--------LEKKYLERKQLKAEI 239 (680)
Q Consensus 181 ~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e-------------~~e--------~e~l~~~~k~Lk~el 239 (680)
.+..+-.+...+..++..++...+.+...+..+..-.++.. .++ .+.+...++.|.+++
T Consensus 14 ~~~~l~~~~~~l~~q~~~l~~~~~e~~~~~~eL~~l~~d~~vy~~iG~vfv~~~~~ea~~~L~~~~e~ie~~i~~le~~~ 93 (117)
T 2zqm_A 14 QLESYQQQLQLVVQQKQKVQLELTEAKKALDEIESLPDDAVVYKTVGTLIVKTTKDKAVAELKEKIETLEVRLNALERQE 93 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555566665555555555544422111110 011 222333445555556
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy10095 240 KKFDSFMLDYQRNVIIKVL 258 (680)
Q Consensus 240 k~Le~~l~~le~~l~~~~l 258 (680)
..++..+.+++..++..+.
T Consensus 94 ~~l~~~l~~lk~~l~~~~~ 112 (117)
T 2zqm_A 94 KKLNEKLKELTAQIQSALR 112 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 6666666666666666553
No 314
>1zbt_A RF-1, peptide chain release factor 1; peptide chain release factor 1 (RF-1), structural joint center for structural genomics, JCSG; 2.34A {Streptococcus mutans}
Probab=39.89 E-value=43 Score=36.09 Aligned_cols=104 Identities=12% Similarity=0.089 Sum_probs=39.3
Q ss_pred ccchHHhhcCHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCChhhHHHHHHH
Q psy10095 153 SYDVKHVLENEDLIVNQLKQRRIDISEFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLV-NKSKLEPSQLEKKYLE 231 (680)
Q Consensus 153 mLD~k~i~~n~e~v~~~l~~R~~~~dld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~-~~~~~e~~e~e~l~~~ 231 (680)
++|++.+.+..+.+.+.+..=++--|.+...++-.++..+...++.++..++.+.+. ..+.. ..+...+.+ .
T Consensus 16 ~~~l~~~~~r~~el~~~l~~p~~~~d~~~~~~~~ke~~~l~~~v~~~~~~~~~~~d~-~~~~el~~~~e~D~e------~ 88 (371)
T 1zbt_A 16 YDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNI-ADAQEMIKDASGDPE------L 88 (371)
T ss_dssp HHHHHHHHHHHHHC--------------------CCHHHHHHHHHHHHHHHHHHHHH-HHHHHC-------CH------H
T ss_pred HhhHHHHHHHHHHHHHHhcCCcchhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhcCCHH------H
Confidence 345666655555555554433221234445555555555555444444444333221 11111 001000111 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Q psy10095 232 RKQLKAEIKKFDSFMLDYQRNVIIKVLKLPNYLD 265 (680)
Q Consensus 232 ~k~Lk~elk~Le~~l~~le~~l~~~~l~LPN~~h 265 (680)
...++++++.++..+.+++.++.. +-||+-+.
T Consensus 89 ~~~a~~e~~~l~~~l~~le~~l~~--lLlp~~~~ 120 (371)
T 1zbt_A 89 EEMAKEELKNSKVAKEEYEEKLRF--LLLPKDPN 120 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT--TTSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hcCCCCCC
Confidence 234567777888888887776643 44565443
No 315
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=38.90 E-value=9.7 Score=35.27 Aligned_cols=27 Identities=41% Similarity=0.823 Sum_probs=11.6
Q ss_pred CCCceeecccccccccChHHHHHhhcc
Q psy10095 52 PGEAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 52 pG~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
+|...|.|..|++.|.+...|..|.++
T Consensus 17 ~~~~~~~C~~C~~~f~~~~~l~~H~~~ 43 (190)
T 2i13_A 17 PGEKPYACPECGKSFSRSDHLAEHQRT 43 (190)
T ss_dssp --------------CCSSHHHHHGGGC
T ss_pred CCCCCCcCCCCccccCCHHHHHHHHHH
Confidence 466779999999999999999999864
No 316
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=38.30 E-value=1.8e+02 Score=24.44 Aligned_cols=81 Identities=9% Similarity=-0.038 Sum_probs=48.6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 175 IDISEFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNVI 254 (680)
Q Consensus 175 ~~~dld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~ 254 (680)
+..|++.|..+.++.+.+..++..-+..-+.+.+.-..+...+.. .+++...+......|+..-..|.....+-...|.
T Consensus 31 ~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~-~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~L~ 109 (118)
T 3uul_A 31 ISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTL-SDEEEFEIQEQMTLLNARWEALRVESMERQSRLH 109 (118)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345789999999999999888877777766666665555443321 1233444555555555555555444444444444
Q ss_pred HH
Q psy10095 255 IK 256 (680)
Q Consensus 255 ~~ 256 (680)
..
T Consensus 110 ~a 111 (118)
T 3uul_A 110 DA 111 (118)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 317
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=37.93 E-value=13 Score=29.12 Aligned_cols=22 Identities=27% Similarity=0.631 Sum_probs=20.0
Q ss_pred eec--ccccccccChHHHHHhhcc
Q psy10095 57 FYC--LHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 57 ~yC--~~C~r~F~~~~~l~~H~k~ 78 (680)
|-| ..|++.|.+...|..|+++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~ 25 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFS 25 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH
T ss_pred ccCCCCCCCcccCCHHHHHHHHHH
Confidence 679 8999999999999999864
No 318
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=36.95 E-value=2e+02 Score=24.55 Aligned_cols=58 Identities=12% Similarity=0.034 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy10095 187 EKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNVIIKVLK 259 (680)
Q Consensus 187 ~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~~~~l~ 259 (680)
+...-++-++++|+.+.+.++.+...+ ......|..+...|+.+....++.+..++-+
T Consensus 20 dtI~lLqmEieELKekN~~L~~e~~e~---------------~~~~~~L~~en~qLk~E~~~wq~Rl~~LLgk 77 (81)
T 2jee_A 20 DTITLLQMEIEELKEKNNSLSQEVQNA---------------QHQREELERENNHLKEQQNGWQERLQALLGR 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444446666766666666554433 3334445555666666666666666655544
No 319
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=36.92 E-value=1.9e+02 Score=24.37 Aligned_cols=63 Identities=6% Similarity=-0.104 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 187 EKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQR 251 (680)
Q Consensus 187 ~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~ 251 (680)
.++..+..++..|+++...|...|...---.. +...+..+..+...+..+|..+.....+|++
T Consensus 22 rEle~le~~Ie~LE~~i~~le~~ladp~~y~~--d~~~~~~l~~~l~~~e~eLe~~~erWeeLe~ 84 (89)
T 2lw1_A 22 RELEQLPQLLEDLEAKLEALQTQVADASFFSQ--PHEQTQKVLADMAAAEQELEQAFERWEYLEA 84 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccccC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777888888888888888764210011 1234556666777777777777777666654
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=36.83 E-value=3.1e+02 Score=29.41 Aligned_cols=34 Identities=15% Similarity=-0.034 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 224 QLEKKYLERKQLKAEIKKFDSFMLDYQRNVIIKV 257 (680)
Q Consensus 224 e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~~~~ 257 (680)
+.++++++...++.++.+++..+.+..+.+.+..
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (487)
T 3oja_A 443 KETQLAEENARLKKLNGEADLALASANATLQELV 476 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHH
Confidence 3455666666677777777766666665555443
No 321
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.46 E-value=16 Score=28.44 Aligned_cols=25 Identities=28% Similarity=0.596 Sum_probs=21.7
Q ss_pred CCceeeccc--ccccccChHHHHHhhc
Q psy10095 53 GEAQFYCLH--CARHFIDEHALKEHFR 77 (680)
Q Consensus 53 G~gq~yC~~--C~r~F~~~~~l~~H~k 77 (680)
|...|-|.. |++.|.+...|..|++
T Consensus 4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~ 30 (79)
T 2dlk_A 4 GSSGMPCDFPGCGRIFSNRQYLNHHKK 30 (79)
T ss_dssp CCSSEECSSTTTCCEESSHHHHHHHHH
T ss_pred CCCCccCCCCCCcCccCCHHHHHHHHH
Confidence 445688886 9999999999999987
No 322
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.29 E-value=14 Score=32.14 Aligned_cols=23 Identities=26% Similarity=0.566 Sum_probs=20.5
Q ss_pred ceeecccccccccChHHHHHh-hc
Q psy10095 55 AQFYCLHCARHFIDEHALKEH-FR 77 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H-~k 77 (680)
-.|-|..|++-|.+...|..| .+
T Consensus 49 kpf~C~~Cgk~F~~~~~L~~H~~r 72 (102)
T 2ghf_A 49 SSYVCVECNFLTKRYDALSEHNLK 72 (102)
T ss_dssp CCEEETTTTEEESSTHHHHTHHHH
T ss_pred CCcCCCCCCcccCCHHHHHHHHHH
Confidence 349999999999999999999 54
No 323
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=36.03 E-value=44 Score=37.48 Aligned_cols=68 Identities=12% Similarity=0.041 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 182 FTQMREKYKEFVGVEKITTELEHKLV----DLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNVIIKV 257 (680)
Q Consensus 182 l~~l~~~~r~l~~~~~~L~~~rn~ls----k~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~~~~ 257 (680)
+..+++.+++-+.+..+.+...|+++ +.|..++.. +...+..++.|+.-|+++-.+|..||.++...+
T Consensus 87 ~k~~~E~Lr~rq~q~~dNdNtynE~S~ELRRrIqyLKek--------VdnQlsnIrvLQsnLedq~~kIQRLEvDIdiqi 158 (562)
T 3ghg_A 87 TTNIMEILRGDFSSANNRDNTYNRVSEDLRSRIEVLKRK--------VIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKI 158 (562)
T ss_dssp HHHHHHTTSSHHHHHHHHHHHHHHTTHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555544444445555445444 333333221 111223445555555555555555555544433
No 324
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=35.93 E-value=2e+02 Score=24.46 Aligned_cols=31 Identities=0% Similarity=-0.172 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 182 FTQMREKYKEFVGVEKITTELEHKLVDLEQY 212 (680)
Q Consensus 182 l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~ 212 (680)
...+.++.+.+...+.+++.+|.+--+.++.
T Consensus 21 ~E~L~qEi~~Lr~kv~elEnErlQyEkKLKs 51 (81)
T 3qh9_A 21 AEELLQELRHLKIKVEELENERNQYEWKLKA 51 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3456778888888888888888776665553
No 325
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.75 E-value=15 Score=29.76 Aligned_cols=23 Identities=26% Similarity=0.307 Sum_probs=20.6
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
.+-|..|++.|.+..+|..|.++
T Consensus 25 ~~~C~~C~k~f~~~~~L~~H~~~ 47 (95)
T 2ej4_A 25 SRPKKSCDRTFSTMHELVTHVTM 47 (95)
T ss_dssp SSSCCCCCCCCSSHHHHHHHHHH
T ss_pred CCcccccccccCCHHHHHHHHHH
Confidence 45699999999999999999875
No 326
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=35.73 E-value=1.6e+02 Score=35.95 Aligned_cols=24 Identities=13% Similarity=0.015 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 228 KYLERKQLKAEIKKFDSFMLDYQR 251 (680)
Q Consensus 228 l~~~~k~Lk~elk~Le~~l~~le~ 251 (680)
+.+++..|+++...|++++.+++.
T Consensus 1021 L~~kv~~L~~e~~~L~qq~~~l~~ 1044 (1080)
T 2dfs_A 1021 TEQLVSELKEQNTLLKTEKEELNR 1044 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566666666666665553
No 327
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=35.65 E-value=15 Score=32.59 Aligned_cols=25 Identities=24% Similarity=0.290 Sum_probs=22.5
Q ss_pred CceeecccccccccChHHHHHhhcc
Q psy10095 54 EAQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 54 ~gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
-..|.|..|++.|.+...|..|++.
T Consensus 23 ~~~~~C~~C~~~f~~~~~L~~H~~~ 47 (155)
T 2rpc_A 23 QLSRPKKSCDRTFSTMHELVTHVTM 47 (155)
T ss_dssp CCSSSCCCCCCCBSSHHHHHHHHHT
T ss_pred hcccccccCCcccCCHHHHHHHHHh
Confidence 4578999999999999999999875
No 328
>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z*
Probab=35.07 E-value=1.2e+02 Score=32.42 Aligned_cols=57 Identities=11% Similarity=0.033 Sum_probs=36.8
Q ss_pred CCccchHHhhcCHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 151 SPSYDVKHVLENEDLIVNQLKQRRIDISEFDFTQMREKYKEFVGVEKITTELEHKLV 207 (680)
Q Consensus 151 ~PmLD~k~i~~n~e~v~~~l~~R~~~~dld~l~~l~~~~r~l~~~~~~L~~~rn~ls 207 (680)
.-.||++.+.+..+.+.+.+..-++--|.+...++-.++..+...++.++..++.+.
T Consensus 22 ~~~~~l~~~~~r~~el~~~~~~p~~w~d~~~~~~~~ke~~~l~~~v~~~~~~~~~~~ 78 (365)
T 1gqe_A 22 RGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLE 78 (365)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345777777777777777776544433566677777777777666666666554443
No 329
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=34.22 E-value=18 Score=32.01 Aligned_cols=23 Identities=26% Similarity=0.804 Sum_probs=13.2
Q ss_pred eeeccc--ccccccChHHHHHhhcc
Q psy10095 56 QFYCLH--CARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~--C~r~F~~~~~l~~H~k~ 78 (680)
.|-|.. |++.|.+..+|..|+++
T Consensus 128 ~~~C~~~~C~~~f~~~~~L~~H~~~ 152 (155)
T 2gli_A 128 PYVCKLPGCTKRYTDPSSLRKHVKT 152 (155)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHHH
T ss_pred CeeCCCCCCccccCCHHHHHHHHHh
Confidence 355655 66666666666666543
No 330
>2fcw_A Alpha-2-macroglobulin receptor-associated protein; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: a.13.1.1 PDB: 2ftu_A
Probab=34.06 E-value=2.6e+02 Score=25.09 Aligned_cols=81 Identities=10% Similarity=0.128 Sum_probs=53.0
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 175 IDISEFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYL---LVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQR 251 (680)
Q Consensus 175 ~~~dld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~---k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~ 251 (680)
.++..|+|.++-.+..=...++..++....++.-.-..+ ..-++ .+......+..+.|.+.++.+.-.+.++..
T Consensus 19 ~NFT~~ELeSlK~EL~HfE~rl~K~rH~~~el~l~~~k~~~~~~~g~---~e~~s~~~ek~~~le~k~Kk~~~kV~Kl~~ 95 (109)
T 2fcw_A 19 ANLTDKELEAFREELKHFEAKIEKHNHYQKQLEIAHEKLRHAESVGD---GERVSRSREKHALLEGRTKELGYTVKKHLQ 95 (109)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---TTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc---hhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 567779999999999999999999998887776332222 11122 223444445566677777777777666666
Q ss_pred HHHHHHH
Q psy10095 252 NVIIKVL 258 (680)
Q Consensus 252 ~l~~~~l 258 (680)
++...++
T Consensus 96 dl~~rI~ 102 (109)
T 2fcw_A 96 DLSGRIS 102 (109)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655554
No 331
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=32.93 E-value=3.6e+02 Score=26.77 Aligned_cols=29 Identities=14% Similarity=-0.033 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q psy10095 233 KQLKAEIKKFDSFMLDYQRNVIIKVLKLP 261 (680)
Q Consensus 233 k~Lk~elk~Le~~l~~le~~l~~~~l~LP 261 (680)
.++...+.++++++..+..+...+.-.||
T Consensus 146 ~~~~~~~~e~~~e~~~l~~~r~~l~~~i~ 174 (256)
T 3na7_A 146 SLVENEVKNIKETQQIIFKKKEDLVEKTE 174 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34444555555666666566666665554
No 332
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=32.50 E-value=2.2e+02 Score=23.76 Aligned_cols=82 Identities=7% Similarity=-0.046 Sum_probs=49.8
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 175 IDISEFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNVI 254 (680)
Q Consensus 175 ~~~dld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~ 254 (680)
+..|++.+..+.++.+.+..++..-+..-+.+.+.-..+...+.. .+++...+......|+..-..|.....+-...|.
T Consensus 31 ~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~-~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~Le 109 (119)
T 3uun_A 31 ISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKL-SEDEETEVQEQMNLLNSRWECLRVASMEKQSNLH 109 (119)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446789999999999999888877777666666655555443321 1233344555555666555555555554444444
Q ss_pred HHH
Q psy10095 255 IKV 257 (680)
Q Consensus 255 ~~~ 257 (680)
..+
T Consensus 110 ~aL 112 (119)
T 3uun_A 110 RVL 112 (119)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 333
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=31.26 E-value=2.9e+02 Score=24.77 Aligned_cols=34 Identities=6% Similarity=-0.012 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 180 FDFTQMREKYKEFVGVEKITTELEHKLVDLEQYL 213 (680)
Q Consensus 180 d~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~ 213 (680)
.+|.++......+..+++.++..+..+...|...
T Consensus 36 ~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~ 69 (129)
T 3tnu_B 36 HEISEMNRMIQRLRAEIDNVKKQCANLQNAIADA 69 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 6678888888888888888888888888877765
No 334
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=30.85 E-value=3e+02 Score=24.79 Aligned_cols=34 Identities=6% Similarity=0.044 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 180 FDFTQMREKYKEFVGVEKITTELEHKLVDLEQYL 213 (680)
Q Consensus 180 d~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~ 213 (680)
.+|.++......+..+++.++..+..+...|..+
T Consensus 38 ~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~ 71 (131)
T 3tnu_A 38 SEISELRRTMQNLEIELQSQLSMKASLENSLEET 71 (131)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4566677777788888888888887777777665
No 335
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=30.13 E-value=2.5e+02 Score=23.76 Aligned_cols=27 Identities=7% Similarity=0.070 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 183 TQMREKYKEFVGVEKITTELEHKLVDL 209 (680)
Q Consensus 183 ~~l~~~~r~l~~~~~~L~~~rn~lsk~ 209 (680)
..+.+++.+++..+......|+.+...
T Consensus 17 ~~~eeel~~lke~l~k~e~~rkele~~ 43 (89)
T 3bas_A 17 KEQLKQMDKMKEDLAKTERIKKELEEQ 43 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444443333444433333
No 336
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=29.68 E-value=2.6e+02 Score=23.79 Aligned_cols=27 Identities=7% Similarity=0.011 Sum_probs=11.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 180 FDFTQMREKYKEFVGVEKITTELEHKL 206 (680)
Q Consensus 180 d~l~~l~~~~r~l~~~~~~L~~~rn~l 206 (680)
|.|.-|--+..+++.+-..|.++.+.+
T Consensus 20 dtI~lLqmEieELKekN~~L~~e~~e~ 46 (81)
T 2jee_A 20 DTITLLQMEIEELKEKNNSLSQEVQNA 46 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334444444444444444333
No 337
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=29.43 E-value=7.6 Score=29.81 Aligned_cols=19 Identities=16% Similarity=0.481 Sum_probs=8.6
Q ss_pred eeecccccccccChHHHHH
Q psy10095 56 QFYCLHCARHFIDEHALKE 74 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~ 74 (680)
.|-|..|++-|....++..
T Consensus 39 ~~~C~~C~k~f~~~~~~~~ 57 (62)
T 1vd4_A 39 TFRCTFCHTEVEEDESAMP 57 (62)
T ss_dssp EEBCSSSCCBCEECTTCSC
T ss_pred CEECCCCCCccccCccccc
Confidence 3444444444444444333
No 338
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=29.41 E-value=2.6e+02 Score=23.65 Aligned_cols=76 Identities=9% Similarity=0.012 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-------------hhh-HHHHHHHHHHHHHHHHHHHHH
Q psy10095 180 FDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLE-------------PSQ-LEKKYLERKQLKAEIKKFDSF 245 (680)
Q Consensus 180 d~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e-------------~~e-~e~l~~~~k~Lk~elk~Le~~ 245 (680)
..+..+..+...+..++..++.+.+.+...+..+..-.++.. .++ .+.+......+..+|+.|+++
T Consensus 8 ~~f~~lq~~~~~l~~q~~~l~~~~~e~~~~~~EL~~l~~d~~vy~~iG~vfv~~~~~e~~~~L~~~~e~i~~~i~~le~~ 87 (107)
T 1fxk_A 8 AQFQQLQQQAQAISVQKQTVEMQINETQKALEELSRAADDAEVYKSSGNILIRVAKDELTEELQEKLETLQLREKTIERQ 87 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHhHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555566666666666665555554444422111100 112 233445556666666666666
Q ss_pred HHHHHHHHHH
Q psy10095 246 MLDYQRNVII 255 (680)
Q Consensus 246 l~~le~~l~~ 255 (680)
+..++.++..
T Consensus 88 ~~~~~~~l~~ 97 (107)
T 1fxk_A 88 EERVMKKLQE 97 (107)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666655543
No 339
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=29.36 E-value=2.8e+02 Score=25.21 Aligned_cols=28 Identities=14% Similarity=0.070 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 226 EKKYLERKQLKAEIKKFDSFMLDYQRNV 253 (680)
Q Consensus 226 e~l~~~~k~Lk~elk~Le~~l~~le~~l 253 (680)
++|..+++.|+.+|++..+++..+-.+.
T Consensus 74 qeLqgEI~~Lnq~Lq~a~ae~erlr~~~ 101 (121)
T 3mq7_A 74 EELEGEITTLNHKLQDASAEVERLRREN 101 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3344444444444444444444444333
No 340
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=28.53 E-value=24 Score=32.50 Aligned_cols=24 Identities=29% Similarity=0.598 Sum_probs=17.6
Q ss_pred ceeeccc--ccccccChHHHHHhhcc
Q psy10095 55 AQFYCLH--CARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~--C~r~F~~~~~l~~H~k~ 78 (680)
..|.|.. |++.|.+...|..|+++
T Consensus 133 ~~~~C~~~~C~k~F~~~~~L~~H~~~ 158 (190)
T 1tf6_A 133 LPYECPHEGCDKRFSLPSRLKRHEKV 158 (190)
T ss_dssp CSSBCCSSSCCCBCSSHHHHHHHHTS
T ss_pred CCccCCCCCCCchhcCHHHHHHHHHH
Confidence 3477877 88888888888888753
No 341
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=28.28 E-value=22 Score=28.25 Aligned_cols=39 Identities=15% Similarity=0.323 Sum_probs=33.2
Q ss_pred CCCCCCceeecccccccccChHHHHHhhccchhhhhhhhccc
Q psy10095 49 FDKPGEAQFYCLHCARHFIDEHALKEHFRTKVHKRRLKALEV 90 (680)
Q Consensus 49 ~dlpG~gq~yC~~C~r~F~~~~~l~~H~k~K~HKrr~K~l~~ 90 (680)
+|.| +--|-.|+.-|....++..|.=||.|=-+||.+-.
T Consensus 9 ~~~P---~~eC~lC~vkYs~r~slqDHIFs~qHI~~vk~~v~ 47 (55)
T 2yrk_A 9 TDGT---KPECTLCGVKYSARLSIRDHIFSKQHISKVRETVG 47 (55)
T ss_dssp CCCC---CSCCTTTTCCCCSSSCHHHHHTSHHHHHHHHHTTC
T ss_pred CCCC---CccccccCcccccccchhhhhccHHHHHHHHHHHH
Confidence 4455 34799999999999999999999999999996543
No 342
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=28.01 E-value=4e+02 Score=29.13 Aligned_cols=36 Identities=8% Similarity=-0.152 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Q psy10095 228 KYLERKQLKAEIKKFDSFMLDYQRNVIIKVLKLPNY 263 (680)
Q Consensus 228 l~~~~k~Lk~elk~Le~~l~~le~~l~~~~l~LPN~ 263 (680)
+..+..+.++.+.++++++..+..++.++...++--
T Consensus 549 le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~~~~ 584 (597)
T 3oja_B 549 LEKQLDNKRAKQAELRQETSLKRQKVKQLEAKKNRN 584 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 333444445555666666666666666666665543
No 343
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=27.38 E-value=3.6e+02 Score=27.34 Aligned_cols=21 Identities=5% Similarity=-0.064 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy10095 192 FVGVEKITTELEHKLVDLEQY 212 (680)
Q Consensus 192 l~~~~~~L~~~rn~lsk~i~~ 212 (680)
+..+++-|.-+++-.+.+|..
T Consensus 161 i~~~LelL~IRK~ma~sEI~E 181 (242)
T 3uux_B 161 LVNSLEFLNIQKNSTLSEIRD 181 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHH
Confidence 333333333334434444433
No 344
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=27.37 E-value=2.7e+02 Score=24.32 Aligned_cols=69 Identities=9% Similarity=0.098 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 182 FTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNV 253 (680)
Q Consensus 182 l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l 253 (680)
...|-.+..++..+++.....|..+.+-++.+..+-.-+++... -.+..+....|..|...+..++.-|
T Consensus 17 kkkL~~Ki~el~~ei~ke~~~regl~Km~~vY~~nP~~GD~~s~---~~~L~e~~~kid~L~~el~K~q~~L 85 (98)
T 2ke4_A 17 RKRLQQQLEERSRELQKEVDQREALKKMKDVYEKTPQMGDPASL---EPQIAETLSNIERLKLEVQKYEAWL 85 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCGGGCCGGGS---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566667777777777788888877766544332212111 2233344445555555555544433
No 345
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=27.20 E-value=28 Score=29.50 Aligned_cols=24 Identities=29% Similarity=0.690 Sum_probs=20.8
Q ss_pred ceeecc--cccccccChHHHHHhhcc
Q psy10095 55 AQFYCL--HCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~--~C~r~F~~~~~l~~H~k~ 78 (680)
..|-|. .|++.|.+..+|..|.++
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~ 29 (124)
T 1ubd_C 4 RTIACPHKGCTKMFRDNSAMRKHLHT 29 (124)
T ss_dssp -CEECCSTTCCCEESSHHHHHHHHGG
T ss_pred CcccCCCCCCcCccCCHHHHHHHHHH
Confidence 358899 899999999999999864
No 346
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=26.70 E-value=25 Score=31.13 Aligned_cols=23 Identities=30% Similarity=0.694 Sum_probs=16.8
Q ss_pred ceeeccc--ccccccChHHHHHhhc
Q psy10095 55 AQFYCLH--CARHFIDEHALKEHFR 77 (680)
Q Consensus 55 gq~yC~~--C~r~F~~~~~l~~H~k 77 (680)
..|-|.. |++.|.+...|..|++
T Consensus 119 ~~~~C~~~~C~k~f~~~~~L~~H~~ 143 (155)
T 2rpc_A 119 KPFKCEFEGCDRRFANSSDRKKHMH 143 (155)
T ss_dssp CSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred CCccCCCCCCCCccCCHHHHHHHHH
Confidence 4477775 7777877777777765
No 347
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=26.27 E-value=31 Score=31.76 Aligned_cols=26 Identities=23% Similarity=0.473 Sum_probs=20.0
Q ss_pred CCceeec--ccccccccChHHHHHhhcc
Q psy10095 53 GEAQFYC--LHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 53 G~gq~yC--~~C~r~F~~~~~l~~H~k~ 78 (680)
|...|.| ..|++.|.+..+|..|+++
T Consensus 101 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~ 128 (190)
T 1tf6_A 101 KICVYVCHFENCGKAFKKHNQLKVHQFS 128 (190)
T ss_dssp TTSCCEECSSSSCEECSSHHHHHHHHGG
T ss_pred CcceeeCCCCCCccccCCHHHHHHHHHH
Confidence 3456788 7788888888888888764
No 348
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=26.18 E-value=17 Score=27.76 Aligned_cols=21 Identities=33% Similarity=0.591 Sum_probs=17.5
Q ss_pred CCceeecccccccccChHHHH
Q psy10095 53 GEAQFYCLHCARHFIDEHALK 73 (680)
Q Consensus 53 G~gq~yC~~C~r~F~~~~~l~ 73 (680)
|...|-|..|++.|....+|.
T Consensus 11 ~~k~~~C~~C~k~F~~~~~l~ 31 (62)
T 1vd4_A 11 NRASFKCPVCSSTFTDLEANQ 31 (62)
T ss_dssp SSSEEECSSSCCEEEHHHHHH
T ss_pred CCCCccCCCCCchhccHHHhH
Confidence 445699999999999887775
No 349
>2gd5_A Charged multivesicular BODY protein 3; CHMP3, ESCRT-III, protein transport; 2.80A {Homo sapiens} PDB: 3frv_A
Probab=26.01 E-value=4.2e+02 Score=24.97 Aligned_cols=75 Identities=9% Similarity=-0.025 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 182 FTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNVIIK 256 (680)
Q Consensus 182 l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~~~ 256 (680)
...|...-|++..++..|+.+.+++...|+.+.+.++...+--..+...+.+.....+-.+...+..+...+...
T Consensus 16 ~~~L~~~~r~Ldr~~~kle~~ekk~~~~Ikka~k~g~~~~aki~Ak~lvr~rk~~~~l~~~~a~l~~v~~~lqt~ 90 (179)
T 2gd5_A 16 SLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQ 90 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566677777777777778878887765544321000011111122223344444555555555554443
No 350
>1v5s_A MAP/microtubule affinity-regulating kinase 3; Ka1 domain, ELKL motif, MARK3, phosphorylation, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.129.6.1
Probab=25.07 E-value=64 Score=29.58 Aligned_cols=48 Identities=15% Similarity=0.054 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHcCCceEEee----cC-CCCCCcccccceeeeee-ecCCCcee
Q psy10095 464 NIQSLLKSVMDKLNMKYRICK----AP-ADVLHTSESHRLEYQVY-SYSLNSWV 511 (680)
Q Consensus 464 eml~~~e~il~~L~LpyRVv~----m~-tgdLg~~a~kkyDIEvW-~P~~~~Y~ 511 (680)
+++......|+++|+.|++.. .| .++-.....-+|.|||+ +|..+.|+
T Consensus 41 eIm~EI~rvL~~~~i~~k~~~~y~L~C~~~~~~~~~~vkfEiEVcKvp~l~l~G 94 (126)
T 1v5s_A 41 DMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEMEVCKLPRLSLNG 94 (126)
T ss_dssp HHHHHHHHHHHHTTEEEEEEETTEEEEEECSSSTTTCEEEEEECCCCTTTCSCC
T ss_pred HHHHHHHHHHHHcCCcEEEECCEEEEEEECCCCCCceEEEEEEEEEecCCCcee
Confidence 566677889999999999722 34 44433345778999987 77666665
No 351
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=24.89 E-value=2.2e+02 Score=34.60 Aligned_cols=14 Identities=43% Similarity=0.638 Sum_probs=5.2
Q ss_pred hhccchhhhhhhhc
Q psy10095 75 HFRTKVHKRRLKAL 88 (680)
Q Consensus 75 H~k~K~HKrr~K~l 88 (680)
+.|+..-+|++++|
T Consensus 896 ~~R~~laRr~~~~L 909 (1080)
T 2dfs_A 896 CYRRMMAKRELKKL 909 (1080)
T ss_dssp HHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 352
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.88 E-value=5 Score=30.72 Aligned_cols=24 Identities=21% Similarity=0.322 Sum_probs=21.5
Q ss_pred ceeecccccccccChHHHHHhhcc
Q psy10095 55 AQFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 55 gq~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
..|-|..|++-|.+..+|..|.++
T Consensus 38 ~~~~C~~C~~~f~~~~~l~~H~~~ 61 (73)
T 2ctu_A 38 KTPMCEKCRKDSCQEAALNKDEGN 61 (73)
T ss_dssp SSCCCHHHHHTCSCCCSSCCCSSC
T ss_pred CCCCCCCCChhhcCHHHHHHHHHh
Confidence 458999999999999999999865
No 353
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=24.74 E-value=29 Score=30.60 Aligned_cols=23 Identities=17% Similarity=0.342 Sum_probs=20.4
Q ss_pred eeecccccccccChHHHHHhhcc
Q psy10095 56 QFYCLHCARHFIDEHALKEHFRT 78 (680)
Q Consensus 56 q~yC~~C~r~F~~~~~l~~H~k~ 78 (680)
++-|..|++.|.+..+|..|.+.
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~ 25 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINS 25 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHH
T ss_pred cCCcCCCccccCCHHHHHHHHHh
Confidence 46799999999999999999875
No 354
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=24.41 E-value=3.6e+02 Score=24.54 Aligned_cols=101 Identities=11% Similarity=0.089 Sum_probs=41.4
Q ss_pred ccccCCCCccchH-HhhcCHHHHHHHHHhcC-C--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--
Q psy10095 145 QLCSNVSPSYDVK-HVLENEDLIVNQLKQRR-I--DISEFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKS-- 218 (680)
Q Consensus 145 ~~~~~~~PmLD~k-~i~~n~e~v~~~l~~R~-~--~~dld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~-- 218 (680)
++.+.-.|++.++ .+.+..+.++.-..+.. + +.....-.++....++|...+..++..-..|.+.|....++-.
T Consensus 21 ~~ms~~DPF~~Vk~EVq~sl~~l~~l~~~w~~l~~~~~~~s~~E~~~~~~EL~~~l~sie~dLeDLe~sI~ivE~np~kF 100 (130)
T 4dnd_A 21 QSMSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKF 100 (130)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred ecCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhc
Confidence 4445558888776 34445555444444321 0 1111111122334455555566666666666666664422110
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHH
Q psy10095 219 KLEPSQLEKKYLERKQLKAEIKKFDSF 245 (680)
Q Consensus 219 ~~e~~e~e~l~~~~k~Lk~elk~Le~~ 245 (680)
..++.+++.-+.-+..++.+|+.++.+
T Consensus 101 ~l~~~Ei~~Rr~fV~~~r~~I~~mk~~ 127 (130)
T 4dnd_A 101 KLPAGDLQERKVFVERMREAVQEMKDH 127 (130)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111223333333444555555555443
No 355
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=22.89 E-value=83 Score=27.35 Aligned_cols=50 Identities=12% Similarity=0.041 Sum_probs=0.0
Q ss_pred HHHHHHhcCCCCC-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10095 166 IVNQLKQRRIDIS-----EFDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLV 215 (680)
Q Consensus 166 v~~~l~~R~~~~d-----ld~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~ 215 (680)
.++.+++|++.-+ +++...|-.+...+..+++.|+.+...+.+++..++.
T Consensus 29 ~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~ 83 (90)
T 2wt7_B 29 KRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKV 83 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 356
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=22.89 E-value=3e+02 Score=30.09 Aligned_cols=26 Identities=8% Similarity=-0.003 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 229 YLERKQLKAEIKKFDSFMLDYQRNVI 254 (680)
Q Consensus 229 ~~~~k~Lk~elk~Le~~l~~le~~l~ 254 (680)
++...++++++..+++++.++++++.
T Consensus 557 ~~~~~~l~~e~~~~~~~~~~l~~~~~ 582 (597)
T 3oja_B 557 RAKQAELRQETSLKRQKVKQLEAKKN 582 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444455555555555555544443
No 357
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=22.66 E-value=1.6e+02 Score=20.41 Aligned_cols=24 Identities=21% Similarity=0.069 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 226 EKKYLERKQLKAEIKKFDSFMLDY 249 (680)
Q Consensus 226 e~l~~~~k~Lk~elk~Le~~l~~l 249 (680)
..++.+...|+++|..|+=++..+
T Consensus 5 aalkqeiaalkkeiaalkfeiaal 28 (33)
T 4dzn_A 5 AALKQEIAALKKEIAALKFEIAAL 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555444443
No 358
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=22.44 E-value=2.2e+02 Score=25.31 Aligned_cols=76 Identities=13% Similarity=0.015 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 180 FDFTQMREKYKEFVGVEKITTELEHKLVDLEQYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNVIIK 256 (680)
Q Consensus 180 d~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l~~~ 256 (680)
|.+.++-++||+....--+|..+++.+.=+|.-++..-... .+...++..+.++...++..++-....+..++..+
T Consensus 2 dsL~EvEEKyrKAMVsnAQLDNEKsal~YqVdlLKD~LEe~-eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~l 77 (103)
T 4h22_A 2 DSLAEVEEKYKKAMVSNAQLDNEKTNFMYQVDTLKDMLLEL-EEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEV 77 (103)
T ss_dssp ------CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 359
>4f9c_B Protein DBF4 homolog A; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_B* 4f9b_B* 4f9a_B*
Probab=22.41 E-value=30 Score=32.39 Aligned_cols=37 Identities=24% Similarity=0.545 Sum_probs=28.3
Q ss_pred ecccccccccChHHHHHhhccchhhhhhhhcccCCCCHHHHHH
Q psy10095 58 YCLHCARHFIDEHALKEHFRTKVHKRRLKALEVEPYTVEESER 100 (680)
Q Consensus 58 yC~~C~r~F~~~~~l~~H~k~K~HKrr~K~l~~~pyt~~eae~ 100 (680)
||--|-..|.+ |..|..|..|++=+. ..-|..-|+..
T Consensus 89 yCE~C~~~y~~---l~~H~~s~~Hr~fa~---~~n~~~lD~li 125 (144)
T 4f9c_B 89 YCECCLQKYED---LETHLLSEQHRNFAQ---SNQYQVVDDIV 125 (144)
T ss_dssp EETTTTEECSC---HHHHHHSHHHHHHHT---SSTTHHHHHHH
T ss_pred Cccchhhhhhh---HHHHcCCHHHHHHHh---cccHHHHHHHH
Confidence 99999999996 789999999966553 34566555433
No 360
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=22.36 E-value=3.6e+02 Score=22.82 Aligned_cols=28 Identities=14% Similarity=0.094 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 182 FTQMREKYKEFVGVEKITTELEHKLVDL 209 (680)
Q Consensus 182 l~~l~~~~r~l~~~~~~L~~~rn~lsk~ 209 (680)
+......++++......|.+++|.|..+
T Consensus 30 l~k~e~~rkele~~~~~l~~ek~~L~~q 57 (89)
T 3bas_A 30 LAKTERIKKELEEQNVTLLEQKNDLFGS 57 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344456667777777777778877766
No 361
>3v86_A De novo design helix; computational design of A protein crystal, helical coil, DE designed helix, de novo protein; 2.91A {Synthetic}
Probab=22.07 E-value=1.3e+02 Score=20.06 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy10095 229 YLERKQLKAEIKKFDSFM 246 (680)
Q Consensus 229 ~~~~k~Lk~elk~Le~~l 246 (680)
+.++.+|+-++..|+.+.
T Consensus 6 kdevgelkgevralkdev 23 (27)
T 3v86_A 6 KDEVGELKGEVRALKDEV 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhHHHHHHHHH
Confidence 334444444444444443
No 362
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=21.41 E-value=3.3e+02 Score=29.41 Aligned_cols=65 Identities=8% Similarity=-0.051 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 181 DFTQMREKYKEFVGVEKITTELEHKLVDLE----QYLLVNKSKLEPSQLEKKYLERKQLKAEIKKFDSFMLDYQRNV 253 (680)
Q Consensus 181 ~l~~l~~~~r~l~~~~~~L~~~rn~lsk~i----~~~k~~~~~~e~~e~e~l~~~~k~Lk~elk~Le~~l~~le~~l 253 (680)
.+..+.+.+|+-+.+++.....=++++..+ ..++.+-+ .++. .++.|+..|+.+-.+|..||.++
T Consensus 89 y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~~V~-------~q~~-~ir~Lq~~l~~q~~kiqRLE~~I 157 (390)
T 1deq_A 89 LTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRRKVI-------EQVQ-RINLLQKNVRDQLVDMKRLEVDI 157 (390)
T ss_pred HHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHH-------HHhH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666666665555555444444433 33322211 1122 45556666666666666666555
No 363
>2xzm_5 Ribosomal protein S26E containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_5
Probab=21.19 E-value=17 Score=33.21 Aligned_cols=14 Identities=36% Similarity=0.660 Sum_probs=11.2
Q ss_pred Cceeeccccccccc
Q psy10095 54 EAQFYCLHCARHFI 67 (680)
Q Consensus 54 ~gq~yC~~C~r~F~ 67 (680)
.-.||||.||-|+-
T Consensus 71 vK~~YCVSCAIH~k 84 (119)
T 2xzm_5 71 VKLQYCISCAIHSR 84 (119)
T ss_dssp ECCEECHHHHHHTT
T ss_pred eeEEEeeeeeeecc
Confidence 46799999998763
No 364
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=21.09 E-value=4.6e+02 Score=23.70 Aligned_cols=24 Identities=17% Similarity=0.095 Sum_probs=11.9
Q ss_pred HHHHHHHHhcCCCCChhHHHHHHH
Q psy10095 164 DLIVNQLKQRRIDISEFDFTQMRE 187 (680)
Q Consensus 164 e~v~~~l~~R~~~~dld~l~~l~~ 187 (680)
+.+..-...|...+.+++|..+-+
T Consensus 47 ~~l~~I~~lr~~G~sL~eIk~~l~ 70 (142)
T 3gp4_A 47 RWILFTRQMRRAGLSIEALIDYLA 70 (142)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHH
Confidence 334444444545555666655543
No 365
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=20.94 E-value=5.6e+02 Score=24.55 Aligned_cols=29 Identities=10% Similarity=0.043 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10095 183 TQMREKYKEFVGVEKITTELEHKLVDLEQ 211 (680)
Q Consensus 183 ~~l~~~~r~l~~~~~~L~~~rn~lsk~i~ 211 (680)
-.+....++++.....|+..+..+.+.+.
T Consensus 44 ~~~E~~~rELq~~~~~L~~~k~~Leke~~ 72 (168)
T 3o0z_A 44 SQLESLNRELQERNRILENSKSQTDKDYY 72 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445554455555555544444443
No 366
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=20.50 E-value=3.3e+02 Score=23.38 Aligned_cols=11 Identities=9% Similarity=0.126 Sum_probs=5.2
Q ss_pred HHHHHHHHHHH
Q psy10095 196 EKITTELEHKL 206 (680)
Q Consensus 196 ~~~L~~~rn~l 206 (680)
.++|.+.|+.+
T Consensus 39 kEqL~~LKkkl 49 (84)
T 1gmj_A 39 KEQLAALKKHK 49 (84)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44455555444
No 367
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=20.46 E-value=4.6e+02 Score=23.45 Aligned_cols=22 Identities=14% Similarity=-0.129 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy10095 189 YKEFVGVEKITTELEHKLVDLE 210 (680)
Q Consensus 189 ~r~l~~~~~~L~~~rn~lsk~i 210 (680)
++++......|.+++|.|..++
T Consensus 36 r~ele~~~~~l~~Ek~~L~~qL 57 (129)
T 2fxo_A 36 RKELEEKMVSLLQEKNDLQLQV 57 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444443
Done!