BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10096
(125 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q01812|GRIK4_RAT Glutamate receptor ionotropic, kainate 4 OS=Rattus norvegicus
GN=Grik4 PE=2 SV=1
Length = 956
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/71 (69%), Positives = 59/71 (83%)
Query: 4 TYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGLLD 63
TY++MW YM +K+PSVFV + +EGI RVL NYAFL+ESTM +Y QRNCNLTQIGGLLD
Sbjct: 686 TYQRMWNYMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLD 745
Query: 64 SKGYGIATPMG 74
+KGYGI P+G
Sbjct: 746 TKGYGIGMPVG 756
>sp|Q8BMF5|GRIK4_MOUSE Glutamate receptor ionotropic, kainate 4 OS=Mus musculus GN=Grik4
PE=2 SV=2
Length = 956
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/71 (69%), Positives = 59/71 (83%)
Query: 4 TYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGLLD 63
TY++MW YM +K+PSVFV + +EGI RVL NYAFL+ESTM +Y QRNCNLTQIGGLLD
Sbjct: 686 TYQRMWNYMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLD 745
Query: 64 SKGYGIATPMG 74
+KGYGI P+G
Sbjct: 746 TKGYGIGMPVG 756
>sp|Q5IS46|GRIK4_PANTR Glutamate receptor ionotropic, kainate 4 OS=Pan troglodytes
GN=GRIK4 PE=2 SV=1
Length = 956
Score = 112 bits (281), Expect = 5e-25, Method: Composition-based stats.
Identities = 49/71 (69%), Positives = 59/71 (83%)
Query: 4 TYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGLLD 63
TY++MW YM +K+PSVFV + +EGI RVL NYAFL+ESTM +Y QRNCNLTQIGGLLD
Sbjct: 686 TYQRMWNYMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLD 745
Query: 64 SKGYGIATPMG 74
+KGYGI P+G
Sbjct: 746 TKGYGIGMPVG 756
>sp|Q16099|GRIK4_HUMAN Glutamate receptor ionotropic, kainate 4 OS=Homo sapiens GN=GRIK4
PE=2 SV=2
Length = 956
Score = 112 bits (281), Expect = 5e-25, Method: Composition-based stats.
Identities = 49/71 (69%), Positives = 59/71 (83%)
Query: 4 TYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGLLD 63
TY++MW YM +K+PSVFV + +EGI RVL NYAFL+ESTM +Y QRNCNLTQIGGLLD
Sbjct: 686 TYQRMWNYMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLD 745
Query: 64 SKGYGIATPMG 74
+KGYGI P+G
Sbjct: 746 TKGYGIGMPVG 756
>sp|Q38PU3|GRIK2_MACFA Glutamate receptor ionotropic, kainate 2 OS=Macaca fascicularis
GN=GRIK2 PE=2 SV=1
Length = 908
Score = 109 bits (272), Expect = 5e-24, Method: Composition-based stats.
Identities = 46/73 (63%), Positives = 59/73 (80%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGL 61
I TY KMW +M +++ SV V + +EGI RVL +YAFLMEST ++++ QRNCNLTQIGGL
Sbjct: 699 ISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGL 758
Query: 62 LDSKGYGIATPMG 74
+DSKGYG+ TPMG
Sbjct: 759 IDSKGYGVGTPMG 771
>sp|P42260|GRIK2_RAT Glutamate receptor ionotropic, kainate 2 OS=Rattus norvegicus
GN=Grik2 PE=1 SV=2
Length = 908
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 59/73 (80%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGL 61
I TY KMW +M +++ SV V + +EGI RVL +YAFLMEST ++++ QRNCNLTQIGGL
Sbjct: 699 ISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGL 758
Query: 62 LDSKGYGIATPMG 74
+DSKGYG+ TPMG
Sbjct: 759 IDSKGYGVGTPMG 771
>sp|P39087|GRIK2_MOUSE Glutamate receptor ionotropic, kainate 2 OS=Mus musculus GN=Grik2
PE=1 SV=4
Length = 908
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 59/73 (80%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGL 61
I TY KMW +M +++ SV V + +EGI RVL +YAFLMEST ++++ QRNCNLTQIGGL
Sbjct: 699 ISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGL 758
Query: 62 LDSKGYGIATPMG 74
+DSKGYG+ TPMG
Sbjct: 759 IDSKGYGVGTPMG 771
>sp|Q13002|GRIK2_HUMAN Glutamate receptor ionotropic, kainate 2 OS=Homo sapiens GN=GRIK2
PE=1 SV=1
Length = 908
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 59/73 (80%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGL 61
I TY KMW +M +++ SV V + +EGI RVL +YAFLMEST ++++ QRNCNLTQIGGL
Sbjct: 699 ISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGL 758
Query: 62 LDSKGYGIATPMG 74
+DSKGYG+ TPMG
Sbjct: 759 IDSKGYGVGTPMG 771
>sp|Q63273|GRIK5_RAT Glutamate receptor ionotropic, kainate 5 OS=Rattus norvegicus
GN=Grik5 PE=1 SV=1
Length = 979
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/71 (64%), Positives = 58/71 (81%)
Query: 4 TYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGLLD 63
TY++MW YM++K+PSVFV + +EGI RVL YAFL+ESTM +Y + NCNLTQIGGLLD
Sbjct: 685 TYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLD 744
Query: 64 SKGYGIATPMG 74
+KGYGI P+G
Sbjct: 745 TKGYGIGMPLG 755
>sp|Q61626|GRIK5_MOUSE Glutamate receptor ionotropic, kainate 5 OS=Mus musculus GN=Grik5
PE=2 SV=2
Length = 979
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/71 (64%), Positives = 58/71 (81%)
Query: 4 TYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGLLD 63
TY++MW YM++K+PSVFV + +EGI RVL YAFL+ESTM +Y + NCNLTQIGGLLD
Sbjct: 685 TYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLD 744
Query: 64 SKGYGIATPMG 74
+KGYGI P+G
Sbjct: 745 TKGYGIGMPLG 755
>sp|Q16478|GRIK5_HUMAN Glutamate receptor ionotropic, kainate 5 OS=Homo sapiens GN=GRIK5
PE=2 SV=2
Length = 980
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/71 (64%), Positives = 58/71 (81%)
Query: 4 TYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGLLD 63
TY++MW YM++K+PSVFV + +EGI RVL YAFL+ESTM +Y + NCNLTQIGGLLD
Sbjct: 685 TYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLD 744
Query: 64 SKGYGIATPMG 74
+KGYGI P+G
Sbjct: 745 TKGYGIGMPLG 755
>sp|Q91755|GRIK2_XENLA Glutamate receptor ionotropic, kainate 2 (Fragment) OS=Xenopus
laevis GN=grik2 PE=2 SV=1
Length = 285
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGL 61
I TY+KMW +M ++ SV V +EGI R L +YAFLMEST ++++ QRNCNLTQIGGL
Sbjct: 76 IPTYEKMWAFMNSRSQSVLVKNNEEGIQRALTSDYAFLMESTTIEFVTQRNCNLTQIGGL 135
Query: 62 LDSKGYGIATPMG 74
+DSKGYG+ TPMG
Sbjct: 136 IDSKGYGVGTPMG 148
>sp|B1AS29|GRIK3_MOUSE Glutamate receptor ionotropic, kainate 3 OS=Mus musculus GN=Grik3
PE=2 SV=1
Length = 919
Score = 103 bits (258), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/73 (64%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGL 61
I T++KMW +M +K PS V +EGI R L +YA LMEST ++YI QRNCNLTQIGGL
Sbjct: 701 ISTFEKMWAFMSSK-PSALVKNNEEGIQRTLTADYALLMESTTIEYITQRNCNLTQIGGL 759
Query: 62 LDSKGYGIATPMG 74
+DSKGYGI TPMG
Sbjct: 760 IDSKGYGIGTPMG 772
>sp|P42264|GRIK3_RAT Glutamate receptor ionotropic, kainate 3 OS=Rattus norvegicus
GN=Grik3 PE=1 SV=1
Length = 919
Score = 103 bits (258), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/73 (64%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGL 61
I T++KMW +M +K PS V +EGI R L +YA LMEST ++YI QRNCNLTQIGGL
Sbjct: 701 ISTFEKMWAFMSSK-PSALVKNNEEGIQRTLTADYALLMESTTIEYITQRNCNLTQIGGL 759
Query: 62 LDSKGYGIATPMG 74
+DSKGYGI TPMG
Sbjct: 760 IDSKGYGIGTPMG 772
>sp|Q38PU2|GRIK3_MACFA Glutamate receptor ionotropic, kainate 3 OS=Macaca fascicularis
GN=GRIK3 PE=2 SV=1
Length = 919
Score = 103 bits (257), Expect = 3e-22, Method: Composition-based stats.
Identities = 46/73 (63%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGL 61
I T++KMW +M +K PS V +EGI R L +YA LMEST ++Y+ QRNCNLTQIGGL
Sbjct: 701 ISTFEKMWAFMSSK-PSALVKNNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQIGGL 759
Query: 62 LDSKGYGIATPMG 74
+DSKGYGI TPMG
Sbjct: 760 IDSKGYGIGTPMG 772
>sp|Q13003|GRIK3_HUMAN Glutamate receptor ionotropic, kainate 3 OS=Homo sapiens GN=GRIK3
PE=2 SV=3
Length = 919
Score = 103 bits (256), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/73 (63%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGL 61
I T++KMW +M +K PS V +EGI R L +YA LMEST ++Y+ QRNCNLTQIGGL
Sbjct: 701 ISTFEKMWAFMSSK-PSALVKNNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQIGGL 759
Query: 62 LDSKGYGIATPMG 74
+DSKGYGI TPMG
Sbjct: 760 IDSKGYGIGTPMG 772
>sp|P22756|GRIK1_RAT Glutamate receptor ionotropic, kainate 1 OS=Rattus norvegicus
GN=Grik1 PE=1 SV=3
Length = 949
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 56/73 (76%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGL 61
I TY+KMW +M +++ S V EGI RVL +YA LMEST ++Y+ QRNCNLTQIGGL
Sbjct: 714 ISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGL 773
Query: 62 LDSKGYGIATPMG 74
+DSKGYG+ TP+G
Sbjct: 774 IDSKGYGVGTPIG 786
>sp|P39086|GRIK1_HUMAN Glutamate receptor ionotropic, kainate 1 OS=Homo sapiens GN=GRIK1
PE=1 SV=1
Length = 918
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 56/73 (76%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGL 61
I TY+KMW +M +++ + V EGI RVL +YA LMEST ++Y+ QRNCNLTQIGGL
Sbjct: 714 ISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGL 773
Query: 62 LDSKGYGIATPMG 74
+DSKGYG+ TP+G
Sbjct: 774 IDSKGYGVGTPIG 786
>sp|Q38PU4|GRIK1_MACFA Glutamate receptor ionotropic, kainate 1 OS=Macaca fascicularis
GN=GRIK1 PE=2 SV=1
Length = 918
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 56/73 (76%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGL 61
I TY+KMW +M +++ + V EGI RVL +YA LMEST ++Y+ QRNCNLTQIGGL
Sbjct: 714 ISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGL 773
Query: 62 LDSKGYGIATPMG 74
+DSKGYG+ TP+G
Sbjct: 774 IDSKGYGVGTPIG 786
>sp|Q9Z2W8|GRIA4_MOUSE Glutamate receptor 4 OS=Mus musculus GN=Gria4 PE=1 SV=2
Length = 902
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
I Y+KMW YM + +PSVF T EG+ RV +G +AFL+ESTM +YI QR C+ ++
Sbjct: 686 IAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKV 745
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYG+ATP G S
Sbjct: 746 GGNLDSKGYGVATPKGSS 763
>sp|P48058|GRIA4_HUMAN Glutamate receptor 4 OS=Homo sapiens GN=GRIA4 PE=2 SV=2
Length = 902
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
I Y+KMW YM + +PSVF T EG+ RV +G +AFL+ESTM +YI QR C+ ++
Sbjct: 686 IAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKV 745
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYG+ATP G S
Sbjct: 746 GGNLDSKGYGVATPKGSS 763
>sp|Q38PU5|GRIA4_MACFA Glutamate receptor 4 OS=Macaca fascicularis GN=GRIA4 PE=2 SV=1
Length = 902
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
I Y+KMW YM + +PSVF T EG+ RV +G +AFL+ESTM +YI QR C+ ++
Sbjct: 686 IAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKV 745
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYG+ATP G S
Sbjct: 746 GGNLDSKGYGVATPKGSS 763
>sp|Q5R4M0|GRIA2_PONAB Glutamate receptor 2 OS=Pongo abelii GN=GRIA2 PE=2 SV=1
Length = 883
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLE--GNYAFLMESTMLDYIVQRN-CNLTQI 58
I + KMW YM + +PSVFV T EG+ RV + G YA+L+ESTM +YI QR C+ ++
Sbjct: 685 IAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKV 744
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYGIATP G S
Sbjct: 745 GGNLDSKGYGIATPKGSS 762
>sp|P42262|GRIA2_HUMAN Glutamate receptor 2 OS=Homo sapiens GN=GRIA2 PE=1 SV=3
Length = 883
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLE--GNYAFLMESTMLDYIVQRN-CNLTQI 58
I + KMW YM + +PSVFV T EG+ RV + G YA+L+ESTM +YI QR C+ ++
Sbjct: 685 IAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKV 744
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYGIATP G S
Sbjct: 745 GGNLDSKGYGIATPKGSS 762
>sp|P19491|GRIA2_RAT Glutamate receptor 2 OS=Rattus norvegicus GN=Gria2 PE=1 SV=2
Length = 883
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLE--GNYAFLMESTMLDYIVQRN-CNLTQI 58
I + KMW YM + +PSVFV T EG+ RV + G YA+L+ESTM +YI QR C+ ++
Sbjct: 685 IAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKV 744
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYGIATP G S
Sbjct: 745 GGNLDSKGYGIATPKGSS 762
>sp|P23819|GRIA2_MOUSE Glutamate receptor 2 OS=Mus musculus GN=Gria2 PE=1 SV=3
Length = 883
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLE--GNYAFLMESTMLDYIVQRN-CNLTQI 58
I + KMW YM + +PSVFV T EG+ RV + G YA+L+ESTM +YI QR C+ ++
Sbjct: 685 IAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKV 744
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYGIATP G S
Sbjct: 745 GGNLDSKGYGIATPKGSS 762
>sp|Q38PU7|GRIA2_MACFA Glutamate receptor 2 OS=Macaca fascicularis GN=GRIA2 PE=2 SV=1
Length = 883
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLE--GNYAFLMESTMLDYIVQRN-CNLTQI 58
I + KMW YM + +PSVFV T EG+ RV + G YA+L+ESTM +YI QR C+ ++
Sbjct: 685 IAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKV 744
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYGIATP G S
Sbjct: 745 GGNLDSKGYGIATPKGSS 762
>sp|P23818|GRIA1_MOUSE Glutamate receptor 1 OS=Mus musculus GN=Gria1 PE=1 SV=1
Length = 907
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
I ++KMW YM++ +PSVFV T +EG+ RV +G YA+L+ESTM +YI QR C+ ++
Sbjct: 678 IAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKV 737
Query: 59 GGLLDSKGYGIATPMGHSGLVGHI 82
GG LDSKGYGIATP G S L G +
Sbjct: 738 GGNLDSKGYGIATPKG-SALRGPV 760
>sp|P19493|GRIA4_RAT Glutamate receptor 4 OS=Rattus norvegicus GN=Gria4 PE=1 SV=1
Length = 902
Score = 85.5 bits (210), Expect = 9e-17, Method: Composition-based stats.
Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
I Y+KMW YM + +PSVF T EG+ RV +G +AFL+ESTM +Y QR C+ ++
Sbjct: 686 IAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYTEQRKPCDTMKV 745
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYG+ATP G S
Sbjct: 746 GGNLDSKGYGVATPKGSS 763
>sp|P19490|GRIA1_RAT Glutamate receptor 1 OS=Rattus norvegicus GN=Gria1 PE=1 SV=2
Length = 907
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
I ++KMW YM++ +PSVFV T +EG+ RV +G YA+L+ESTM +YI QR C+ ++
Sbjct: 678 IAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKV 737
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYGIATP G +
Sbjct: 738 GGNLDSKGYGIATPKGSA 755
>sp|Q38PU8|GRIA1_MACFA Glutamate receptor 1 OS=Macaca fascicularis GN=GRIA1 PE=2 SV=1
Length = 906
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
I ++KMW YM++ +PSVFV T +EG+ RV +G YA+L+ESTM +YI QR C+ ++
Sbjct: 678 IAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKV 737
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYGIATP G +
Sbjct: 738 GGNLDSKGYGIATPKGSA 755
>sp|P42261|GRIA1_HUMAN Glutamate receptor 1 OS=Homo sapiens GN=GRIA1 PE=1 SV=2
Length = 906
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
I ++KMW YM++ +PSVFV T +EG+ RV +G YA+L+ESTM +YI QR C+ ++
Sbjct: 678 IAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKV 737
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYGIATP G +
Sbjct: 738 GGNLDSKGYGIATPKGSA 755
>sp|Q38PU6|GRIA3_MACFA Glutamate receptor 3 OS=Macaca fascicularis GN=GRIA3 PE=2 SV=1
Length = 894
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
I Y+KMW YM++ +PSVF T +G+ RV +G +AFL+ESTM +YI QR C+ ++
Sbjct: 696 IAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKV 755
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYG+ATP G +
Sbjct: 756 GGNLDSKGYGVATPKGSA 773
>sp|Q9Z2W9|GRIA3_MOUSE Glutamate receptor 3 OS=Mus musculus GN=Gria3 PE=1 SV=2
Length = 888
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
I Y+KMW YM++ +PSVF T +G+ RV +G +AFL+ESTM +YI QR C+ ++
Sbjct: 690 IAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKV 749
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYG+ATP G +
Sbjct: 750 GGNLDSKGYGVATPKGSA 767
>sp|P19492|GRIA3_RAT Glutamate receptor 3 OS=Rattus norvegicus GN=Gria3 PE=1 SV=1
Length = 888
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
I Y+KMW YM++ +PSVF T +G+ RV +G +AFL+ESTM +YI QR C+ ++
Sbjct: 690 IAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKV 749
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYG+ATP G +
Sbjct: 750 GGNLDSKGYGVATPKGSA 767
>sp|P42263|GRIA3_HUMAN Glutamate receptor 3 OS=Homo sapiens GN=GRIA3 PE=1 SV=2
Length = 894
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
I Y+KMW YM++ +PSVF T +G+ RV +G +AFL+ESTM +YI QR C+ ++
Sbjct: 696 IAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKV 755
Query: 59 GGLLDSKGYGIATPMGHS 76
GG LDSKGYG+ATP G +
Sbjct: 756 GGNLDSKGYGVATPKGSA 773
>sp|P34299|GLR1_CAEEL Glutamate receptor 1 OS=Caenorhabditis elegans GN=glr-1 PE=1 SV=2
Length = 962
Score = 79.3 bits (194), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVL--EGNYAFLMESTMLDYIVQRN-CNLTQI 58
+ Y++MWRYME++ P VFV++Y EGI+RV +G YAFL+E+T +Y R C+ ++
Sbjct: 729 VQIYQRMWRYMESQVPPVFVASYAEGIERVRSHKGRYAFLLEATANEYENTRKPCDTMKV 788
Query: 59 GGLLDSKGYGIATPMG 74
G L+S GYGIATP G
Sbjct: 789 GANLNSIGYGIATPFG 804
>sp|P26591|GLRK_LYMST Glutamate receptor OS=Lymnaea stagnalis PE=2 SV=1
Length = 917
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 4 TYKKMWRYMENKKPSVFVSTYKEGIDRVLEGN--YAFLMESTMLDYIVQRN-CNLTQIGG 60
TY++MW YM + +PSVFV T++EGI RV + N YA+L ES+ +DY+ R C+ ++G
Sbjct: 694 TYQRMWAYMTSAQPSVFVKTHEEGIQRVRQSNGKYAYLTESSTIDYVSNRKPCDTLKVGS 753
Query: 61 LLDSKGYGIATPMG 74
L+S G+GI TP+G
Sbjct: 754 NLNSDGFGIGTPVG 767
>sp|P20262|GLRK_LITBE Probable glutamate receptor OS=Lithobates berlandieri PE=1 SV=1
Length = 487
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 4 TYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGLLD 63
T++ ++ YM+ +K V V T+ EG+ RV E NYAFL ES D++V ++C+L + ++
Sbjct: 296 TFQMIYEYMDKRKDRVLVKTFSEGVQRVRESNYAFLGESISQDFVVAKHCDLIRAPEMIG 355
Query: 64 SKGYGIATPM 73
+GYGIA +
Sbjct: 356 GRGYGIAAEL 365
>sp|Q91756|GLRK_XENLA Glutamate receptor U1 OS=Xenopus laevis GN=kbp PE=2 SV=1
Length = 479
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 4 TYKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGLLD 63
TY+ ++ YM+ +K + V ++ EG+ RV E NYAFL ES M D +V ++C L + ++
Sbjct: 297 TYRMIYEYMDKRKDELLVKSFAEGVRRVRESNYAFLGESVMQDIMVAKHCELARAPQIIA 356
Query: 64 SKGYGIATPM 73
+GYGIA +
Sbjct: 357 GRGYGIAASI 366
>sp|P19439|GLRK_CHICK Probable glutamate receptor OS=Gallus gallus GN=KBP PE=1 SV=1
Length = 487
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 5 YKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGLLDS 64
++ ++ YM+ ++ V V TY+E + RV+E NYAF+ ES D R+CNL + ++ +
Sbjct: 303 HRMVYEYMDKRRDHVLVKTYQEAVQRVMESNYAFIGESISQDLAAARHCNLIRAPEVIGA 362
Query: 65 KGYGIAT 71
+G+GIAT
Sbjct: 363 RGFGIAT 369
>sp|Q90218|GLRK_ANAPL Probable glutamate receptor OS=Anas platyrhynchos GN=KBP PE=2 SV=1
Length = 487
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 44/67 (65%)
Query: 5 YKKMWRYMENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDYIVQRNCNLTQIGGLLDS 64
++ ++ YM+ ++ V V TY+E + RV++ NYAF+ ES D R+CNL + ++ +
Sbjct: 303 HQMIYEYMDKRRDHVLVKTYQEAVQRVMDSNYAFIGESISQDLAAARHCNLIRAPEVIGA 362
Query: 65 KGYGIAT 71
+G+GIAT
Sbjct: 363 RGFGIAT 369
>sp|Q03445|GLK1_DROME Glutamate receptor 1 OS=Drosophila melanogaster GN=Glu-RI PE=2 SV=2
Length = 991
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 2 IDTYKKMWRYMENKKPSVFVSTYKEGIDRVLE--GNYAFLMESTMLDYIVQRN-CNLTQI 58
I + KMW YM N V TY EGI RV + G YA L+ES +Y+ R C+ ++
Sbjct: 771 IGLHNKMWEYM-NANQHHSVHTYDEGIRRVRQSKGKYALLVESPKNEYVNARPPCDTMKV 829
Query: 59 GGLLDSKGYGIATPMG 74
G +D+KG+G+ATP+G
Sbjct: 830 GRNIDTKGFGVATPIG 845
>sp|Q10914|GLR2_CAEEL Glutamate receptor 2 OS=Caenorhabditis elegans GN=glr-2 PE=1 SV=3
Length = 977
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 19/94 (20%)
Query: 1 MIDTYKKMWRYM--------ENKKPSV--------FVSTYKEGIDRVL--EGNYAFLMES 42
++ YKKMW +M E +K S+ FVS+Y +GI++V +G YAFL+E
Sbjct: 755 IVPLYKKMWNFMVSTTQKQIELEKQSITNSTSNRIFVSSYADGIEKVRTSKGKYAFLLEE 814
Query: 43 TMLDYIV-QRNCNLTQIGGLLDSKGYGIATPMGH 75
T +Y +R C+ ++G L++ GYGIAT +G+
Sbjct: 815 TTNNYESGRRPCDTMKVGQNLNTLGYGIATKIGN 848
>sp|Q9ULK0|GRID1_HUMAN Glutamate receptor ionotropic, delta-1 OS=Homo sapiens GN=GRID1
PE=2 SV=2
Length = 1009
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 4 TYKKMWRYM-ENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDY--IVQRNCNLTQIGG 60
T+ ++WR + +N VS+ EGI + +GNYAFL + +++Y + +C++T IG
Sbjct: 704 TFAELWRTISKNGGADNCVSSPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGN 763
Query: 61 LLDSKGYGIATPMG 74
+ SKGYGIA G
Sbjct: 764 SISSKGYGIALQHG 777
>sp|Q62640|GRID1_RAT Glutamate receptor ionotropic, delta-1 OS=Rattus norvegicus
GN=Grid1 PE=2 SV=1
Length = 1009
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 4 TYKKMWRYM-ENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDY--IVQRNCNLTQIGG 60
T+ ++WR + +N VS EGI + +GNYAFL + +++Y + +C++T IG
Sbjct: 704 TFAELWRTISKNGGADNCVSNPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGN 763
Query: 61 LLDSKGYGIATPMG 74
+ SKGYGIA G
Sbjct: 764 SISSKGYGIALQHG 777
>sp|Q61627|GRID1_MOUSE Glutamate receptor ionotropic, delta-1 OS=Mus musculus GN=Grid1
PE=1 SV=2
Length = 1009
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 4 TYKKMWRYM-ENKKPSVFVSTYKEGIDRVLEGNYAFLMESTMLDY--IVQRNCNLTQIGG 60
T+ ++WR + +N VS EGI + +GNYAFL + +++Y + +C++T IG
Sbjct: 704 TFAELWRTISKNGGADNCVSNPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGN 763
Query: 61 LLDSKGYGIATPMG 74
+ SKGYGIA G
Sbjct: 764 SISSKGYGIALQHG 777
>sp|O43424|GRID2_HUMAN Glutamate receptor ionotropic, delta-2 OS=Homo sapiens GN=GRID2
PE=2 SV=2
Length = 1007
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 5 YKKMWRYMENKKPSVF-VSTYKEGIDRVLEGNYAFLMESTMLDYIV--QRNCNLTQIGGL 61
Y +MWR + S V + GI +V GNYAF+ ++ +L+Y+ +C+ IG
Sbjct: 705 YSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDCSFYTIGNT 764
Query: 62 LDSKGYGIA 70
+ +GYGIA
Sbjct: 765 VADRGYGIA 773
>sp|Q63226|GRID2_RAT Glutamate receptor ionotropic, delta-2 OS=Rattus norvegicus
GN=Grid2 PE=1 SV=2
Length = 1007
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 5 YKKMWRYMENKKPSVF-VSTYKEGIDRVLEGNYAFLMESTMLDYIV--QRNCNLTQIGGL 61
Y +MWR + S V + GI +V GNYAF+ ++ +L+Y+ +C+ +G
Sbjct: 705 YSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDCSFYTVGNT 764
Query: 62 LDSKGYGIA 70
+ +GYGIA
Sbjct: 765 VADRGYGIA 773
>sp|Q61625|GRID2_MOUSE Glutamate receptor ionotropic, delta-2 OS=Mus musculus GN=Grid2
PE=1 SV=1
Length = 1007
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 5 YKKMWRYMENKKPSVF-VSTYKEGIDRVLEGNYAFLMESTMLDYIV--QRNCNLTQIGGL 61
Y +MWR + S V + GI +V GNYAF+ ++ +L+Y+ +C+ +G
Sbjct: 705 YSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDCSFYTVGNT 764
Query: 62 LDSKGYGIA 70
+ +GYGIA
Sbjct: 765 VADRGYGIA 773
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,837,979
Number of Sequences: 539616
Number of extensions: 1939258
Number of successful extensions: 4259
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4145
Number of HSP's gapped (non-prelim): 78
length of query: 125
length of database: 191,569,459
effective HSP length: 92
effective length of query: 33
effective length of database: 141,924,787
effective search space: 4683517971
effective search space used: 4683517971
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)