RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10100
         (65 letters)



>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain
           {Soybean (Glycine max), isozyme L1 [TaxId: 3847]}
          Length = 690

 Score = 23.0 bits (49), Expect = 3.1
 Identities = 6/24 (25%), Positives = 9/24 (37%)

Query: 32  IRSVALIEDLPGEETHFASIDDFY 55
             S   ++  P E   F  + D Y
Sbjct: 121 FESAFDLKSTPIEFHSFQDVHDLY 144


>d1g9ka2 d.92.1.6 (A:3-244) Metalloprotease {Pseudomonas sp., tac
          ii 18 [TaxId: 306]}
          Length = 242

 Score = 23.3 bits (49), Expect = 3.2
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 43 GEETHFASIDDFYQTVERG 61
          G  + F  ID+F    +RG
Sbjct: 1  GTSSAFTQIDNFSHFYDRG 19


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.328    0.144    0.449 

Gapped
Lambda     K      H
   0.267   0.0582    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 252,817
Number of extensions: 8982
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 2
Length of query: 65
Length of database: 2,407,596
Length adjustment: 34
Effective length of query: 31
Effective length of database: 1,940,776
Effective search space: 60164056
Effective search space used: 60164056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.2 bits)