Query psy10102
Match_columns 86
No_of_seqs 102 out of 290
Neff 5.0
Searched_HMMs 13730
Date Fri Aug 16 17:57:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10102.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10102hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2fm9a1 a.257.1.1 (A:49-263) C 23.4 11 0.00082 25.5 0.8 11 12-22 196-206 (215)
2 d3b7sa1 a.118.1.7 (A:461-610) 14.9 1.3E+02 0.0093 18.3 5.4 62 15-76 57-147 (150)
3 d1jt6a2 a.121.1.1 (A:73-187) M 10.5 1E+02 0.0075 17.7 2.9 31 46-76 80-111 (115)
4 d1ekra_ d.58.21.1 (A:) Molybde 8.3 68 0.005 20.1 1.4 22 26-47 98-120 (146)
5 d1dq3a3 d.95.2.2 (A:129-226) P 7.6 88 0.0064 18.2 1.5 13 29-41 80-92 (98)
6 d2c52b1 a.153.1.1 (B:303-353) 7.0 1.3E+02 0.0096 15.6 2.0 14 16-29 12-25 (51)
7 d1kbha_ a.153.1.1 (A:) Nuclear 6.3 1.3E+02 0.0094 15.4 1.6 17 16-32 8-24 (47)
8 d1v54b2 f.17.2.1 (B:1-90) Mito 5.4 1.2E+02 0.009 16.7 1.4 27 2-29 61-89 (90)
9 d1niga_ a.25.2.1 (A:) Hypothet 5.3 3.5E+02 0.026 16.6 3.7 29 32-61 94-122 (148)
10 d3ehbb2 f.17.2.1 (B:1-107) Bac 4.9 1E+02 0.0074 17.5 0.7 7 2-8 77-83 (107)
No 1
>d2fm9a1 a.257.1.1 (A:49-263) Cell invasion protein SipA, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=23.41 E-value=11 Score=25.53 Aligned_cols=11 Identities=36% Similarity=0.694 Sum_probs=9.8
Q ss_pred HHHhHhhhHhH
Q psy10102 12 LESVAILPQLF 22 (86)
Q Consensus 12 LEsvAILPQL~ 22 (86)
||.+|++|||.
T Consensus 196 L~~~av~P~LL 206 (215)
T d2fm9a1 196 LEMQTLIPLLL 206 (215)
T ss_dssp CHHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 78999999985
No 2
>d3b7sa1 a.118.1.7 (A:461-610) Leukotriene A4 hydrolase C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.88 E-value=1.3e+02 Score=18.31 Aligned_cols=62 Identities=13% Similarity=0.214 Sum_probs=37.6
Q ss_pred hHhhhHhHhhhhcCCcchhHHHHHHHHH-------------------------HHHHHHHHh----hhhhhhhcCCcchh
Q psy10102 15 VAILPQLFLVSKTGEAESITSHYLFALG-------------------------AYRALYLLN----WVYRYYSEDYLDLI 65 (86)
Q Consensus 15 vAILPQL~ml~k~~~ve~lts~Yv~~Lg-------------------------~yR~ly~~~----Wi~~y~~~~~~~~~ 65 (86)
+.-|.+.+-+.++++.|..-.-|..++. +||.|.-.. +-.+.+.......+
T Consensus 57 l~~Ld~~Y~ls~s~N~EI~~rW~~l~i~~~~~~~~~~v~~fL~~vGRmKfvrPlYr~L~~~~~~r~~A~~~F~k~r~~YH 136 (150)
T d3b7sa1 57 IKRMQEVYNFNAINNSEIRFRWLRLCIQSKWEDAIPLALKMATEQGRMKFTRPLFKDLAAFDKSHDQAVRTYQEHKASMH 136 (150)
T ss_dssp HHHHHHHHCGGGCCCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHcCCceehHHHHHHHHhCcchHHHHHHHHHHHHhhcC
Confidence 3445555555566676666655555554 788875533 55555555555667
Q ss_pred HhHHHHHHHHH
Q psy10102 66 AIVAGVVQTAL 76 (86)
Q Consensus 66 ~~~~g~iqt~l 76 (86)
++..+.|+-.|
T Consensus 137 pi~~~~V~kdL 147 (150)
T d3b7sa1 137 PVTAMLVGKDL 147 (150)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 77777777655
No 3
>d1jt6a2 a.121.1.1 (A:73-187) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=10.50 E-value=1e+02 Score=17.74 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=18.6
Q ss_pred HHHHHhhhhhhhhc-CCcchhHhHHHHHHHHH
Q psy10102 46 ALYLLNWVYRYYSE-DYLDLIAIVAGVVQTAL 76 (86)
Q Consensus 46 ~ly~~~Wi~~y~~~-~~~~~~~~~~g~iqt~l 76 (86)
++.++||+..++.. +..++-.+.-..++.++
T Consensus 80 il~~lng~~~Wy~~~g~~~~~~la~~~~~l~L 111 (115)
T d1jt6a2 80 AANAVNGIVTFTHEQNINERIKLMNKFSQIFL 111 (115)
T ss_dssp HHHHHHHHHHSCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 45677899886644 33444555555666554
No 4
>d1ekra_ d.58.21.1 (A:) Molybdenum cofactor biosynthesis protein C, MoaC {Escherichia coli [TaxId: 562]}
Probab=8.25 E-value=68 Score=20.12 Aligned_cols=22 Identities=41% Similarity=0.499 Sum_probs=18.4
Q ss_pred hcC-CcchhHHHHHHHHHHHHHH
Q psy10102 26 KTG-EAESITSHYLFALGAYRAL 47 (86)
Q Consensus 26 k~~-~ve~lts~Yv~~Lg~yR~l 47 (86)
||| |-|.+|+--+.+|.+|=-+
T Consensus 98 kTGVEMEALtavsva~LTiYDM~ 120 (146)
T d1ekra_ 98 KTGVEMEALTAASVAALTIYDMC 120 (146)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceehHHHHHHHHHHHHHHHHH
Confidence 566 8899999999999988543
No 5
>d1dq3a3 d.95.2.2 (A:129-226) PI-Pfui intein {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=7.57 E-value=88 Score=18.24 Aligned_cols=13 Identities=62% Similarity=0.792 Sum_probs=10.2
Q ss_pred CcchhHHHHHHHH
Q psy10102 29 EAESITSHYLFAL 41 (86)
Q Consensus 29 ~ve~lts~Yv~~L 41 (86)
++.++||||+=.|
T Consensus 80 kar~itshy~~ll 92 (98)
T d1dq3a3 80 KARNITSHYLKLL 92 (98)
T ss_dssp CCHHHHHHHHHHH
T ss_pred eecccHHHHHHHH
Confidence 4678999998655
No 6
>d2c52b1 a.153.1.1 (B:303-353) Nuclear receptor coactivator 1, NCOA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.97 E-value=1.3e+02 Score=15.63 Aligned_cols=14 Identities=29% Similarity=0.287 Sum_probs=10.5
Q ss_pred HhhhHhHhhhhcCC
Q psy10102 16 AILPQLFLVSKTGE 29 (86)
Q Consensus 16 AILPQL~ml~k~~~ 29 (86)
|+|-||.++-+..+
T Consensus 12 ALLdQL~t~L~n~D 25 (51)
T d2c52b1 12 ALLEQLVSFLSGKD 25 (51)
T ss_dssp HHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhcCc
Confidence 78889998876544
No 7
>d1kbha_ a.153.1.1 (A:) Nuclear receptor coactivator ACTR {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.28 E-value=1.3e+02 Score=15.42 Aligned_cols=17 Identities=29% Similarity=0.362 Sum_probs=12.3
Q ss_pred HhhhHhHhhhhcCCcch
Q psy10102 16 AILPQLFLVSKTGEAES 32 (86)
Q Consensus 16 AILPQL~ml~k~~~ve~ 32 (86)
|+|-||..+-+..+.+.
T Consensus 8 aLldQL~s~L~~~D~~~ 24 (47)
T d1kbha_ 8 ALLDQLHTLLSNTDATG 24 (47)
T ss_dssp HHHHHHHHHTTSSCCTT
T ss_pred HHHHHHHHHHhcCchHH
Confidence 78899998887655433
No 8
>d1v54b2 f.17.2.1 (B:1-90) Mitochondrial cytochrome c oxidase, subunit II {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.42 E-value=1.2e+02 Score=16.68 Aligned_cols=27 Identities=37% Similarity=0.599 Sum_probs=13.4
Q ss_pred ceeehhhH--HHHHHhHhhhHhHhhhhcCC
Q psy10102 2 VQVLWTFS--IYLESVAILPQLFLVSKTGE 29 (86)
Q Consensus 2 ~ei~WtfS--i~LEsvAILPQL~ml~k~~~ 29 (86)
+|+.||.- +.|=..| +|-+.+++..+|
T Consensus 61 lEiiWTiiP~lILi~ia-~PSl~lLY~~de 89 (90)
T d1v54b2 61 VETIWTILPAIILILIA-LPSLRILYMMDE 89 (90)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHH-HHHHHHHHHHcc
Confidence 57777763 2222222 355555554433
No 9
>d1niga_ a.25.2.1 (A:) Hypothetical protein Ta1238 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=5.29 E-value=3.5e+02 Score=16.56 Aligned_cols=29 Identities=24% Similarity=0.360 Sum_probs=20.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhcCC
Q psy10102 32 SITSHYLFALGAYRALYLLNWVYRYYSEDY 61 (86)
Q Consensus 32 ~lts~Yv~~Lg~yR~ly~~~Wi~~y~~~~~ 61 (86)
+-++-|++ ++.+-+=..+||+++..+...
T Consensus 94 nk~slYmf-lArsh~~~Av~~~~~m~edEr 122 (148)
T d1niga_ 94 NRWSLYMF-LARSAVDSAVYWSYRMKETEE 122 (148)
T ss_dssp CHHHHHHH-HHHHHHHHHHHHHHHHHTSTT
T ss_pred chHHHHHH-HHHHHHHHHHHHHHHhcchHH
Confidence 44677876 555666778999999776643
No 10
>d3ehbb2 f.17.2.1 (B:1-107) Bacterial aa3 type cytochrome c oxidase subunit II {Paracoccus denitrificans [TaxId: 266]}
Probab=4.85 E-value=1e+02 Score=17.54 Aligned_cols=7 Identities=43% Similarity=1.412 Sum_probs=4.6
Q ss_pred ceeehhh
Q psy10102 2 VQVLWTF 8 (86)
Q Consensus 2 ~ei~Wtf 8 (86)
+|+.||.
T Consensus 77 lEi~WTv 83 (107)
T d3ehbb2 77 IEVIWTL 83 (107)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5777774
Done!