BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy10105
         (197 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|357607497|gb|EHJ65536.1| putative iroquois-like protein [Danaus plexippus]
          Length = 456

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 89/119 (74%), Positives = 104/119 (87%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 176 LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 235

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKG 172
           TWFANARRRLKKENKMTWEPKNKTDDD+D ++SD + +  D +  ++++ ++   +++G
Sbjct: 236 TWFANARRRLKKENKMTWEPKNKTDDDEDTMLSDEEREQDDKIKANKDEERKGDELLQG 294


>gi|328718930|ref|XP_001946080.2| PREDICTED: hypothetical protein LOC100165521 [Acyrthosiphon pisum]
          Length = 585

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/113 (85%), Positives = 103/113 (91%), Gaps = 2/113 (1%)

Query: 52  SNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQ 111
           S L A  Y AGYDLAARRKNATRESTATLK+WLNEHKKNPYPTKGEKIMLAIITKMTLTQ
Sbjct: 160 STLAAYGYSAGYDLAARRKNATRESTATLKSWLNEHKKNPYPTKGEKIMLAIITKMTLTQ 219

Query: 112 VSTWFANARRRLKKENKMTWEPKNKT--DDDDDAIISDCDEKDKDDLMMDEEK 162
           VSTWFANARRRLKKENKMTWEPKNKT  DDDDDA  SDC++KDKDD++M +EK
Sbjct: 220 VSTWFANARRRLKKENKMTWEPKNKTDDDDDDDAGSSDCEDKDKDDMLMGDEK 272


>gi|307197225|gb|EFN78544.1| Homeobox protein araucan [Harpegnathos saltator]
          Length = 670

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/109 (88%), Positives = 100/109 (91%), Gaps = 1/109 (0%)

Query: 52  SNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQ 111
           S L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQ
Sbjct: 211 SALAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQ 270

Query: 112 VSTWFANARRRLKKENKMTWEPKNKTDDDDDAIISDC-DEKDKDDLMMD 159
           VSTWFANARRRLKKENKMTWEPKNKTDDDDDA+++D  D K+KDDL  D
Sbjct: 271 VSTWFANARRRLKKENKMTWEPKNKTDDDDDAVLTDSEDNKEKDDLATD 319


>gi|340716548|ref|XP_003396759.1| PREDICTED: homeobox protein caupolican-like isoform 2 [Bombus
           terrestris]
          Length = 653

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 95/109 (87%), Positives = 100/109 (91%), Gaps = 1/109 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 189 LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 248

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDC-DEKDKDDLMMDEE 161
           TWFANARRRLKKENKMTWEPKNKTDDDDDA+++D  D K+KDDL  D +
Sbjct: 249 TWFANARRRLKKENKMTWEPKNKTDDDDDAVLTDSEDNKEKDDLASDTQ 297


>gi|332024321|gb|EGI64520.1| Homeobox protein araucan [Acromyrmex echinatior]
          Length = 643

 Score =  186 bits (471), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 95/107 (88%), Positives = 99/107 (92%), Gaps = 1/107 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 173 LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 232

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDC-DEKDKDDLMMD 159
           TWFANARRRLKKENKMTWEPKNKTDDDDDA+++D  D K+KDDL  D
Sbjct: 233 TWFANARRRLKKENKMTWEPKNKTDDDDDAVLTDSEDNKEKDDLASD 279


>gi|345484618|ref|XP_001604958.2| PREDICTED: homeobox protein caupolican-like [Nasonia vitripennis]
          Length = 725

 Score =  185 bits (469), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 95/110 (86%), Positives = 100/110 (90%), Gaps = 1/110 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 235 LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 294

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDC-DEKDKDDLMMDEEK 162
           TWFANARRRLKKENKMTWEPKNKTDDDDDA+++D  D KDKDD+  D  +
Sbjct: 295 TWFANARRRLKKENKMTWEPKNKTDDDDDAVLTDSEDNKDKDDMGSDNRQ 344


>gi|340716546|ref|XP_003396758.1| PREDICTED: homeobox protein caupolican-like isoform 1 [Bombus
           terrestris]
          Length = 674

 Score =  185 bits (469), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 95/109 (87%), Positives = 100/109 (91%), Gaps = 1/109 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 210 LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 269

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDC-DEKDKDDLMMDEE 161
           TWFANARRRLKKENKMTWEPKNKTDDDDDA+++D  D K+KDDL  D +
Sbjct: 270 TWFANARRRLKKENKMTWEPKNKTDDDDDAVLTDSEDNKEKDDLASDTQ 318


>gi|110760661|ref|XP_396292.3| PREDICTED: homeobox protein araucan-like [Apis mellifera]
          Length = 677

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 95/109 (87%), Positives = 100/109 (91%), Gaps = 1/109 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 210 LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 269

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDC-DEKDKDDLMMDEE 161
           TWFANARRRLKKENKMTWEPKNKTDDDDDA+++D  D K+KDDL  D +
Sbjct: 270 TWFANARRRLKKENKMTWEPKNKTDDDDDAVLTDSEDNKEKDDLAGDNQ 318


>gi|383860361|ref|XP_003705659.1| PREDICTED: homeobox protein caupolican-like [Megachile rotundata]
          Length = 679

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 95/109 (87%), Positives = 100/109 (91%), Gaps = 1/109 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 210 LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 269

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDC-DEKDKDDLMMDEE 161
           TWFANARRRLKKENKMTWEPKNKTDDDDDA+++D  D K+KDDL  D +
Sbjct: 270 TWFANARRRLKKENKMTWEPKNKTDDDDDAVLTDSEDNKEKDDLSGDNQ 318


>gi|350404412|ref|XP_003487096.1| PREDICTED: homeobox protein caupolican-like [Bombus impatiens]
          Length = 624

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 95/109 (87%), Positives = 100/109 (91%), Gaps = 1/109 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 209 LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 268

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDC-DEKDKDDLMMDEE 161
           TWFANARRRLKKENKMTWEPKNKTDDDDDA+++D  D K+KDDL  D +
Sbjct: 269 TWFANARRRLKKENKMTWEPKNKTDDDDDAVLTDSEDNKEKDDLASDTQ 317


>gi|380014099|ref|XP_003691080.1| PREDICTED: homeobox protein araucan-like [Apis florea]
          Length = 382

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/120 (80%), Positives = 103/120 (85%), Gaps = 1/120 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 210 LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 269

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDC-DEKDKDDLMMDEEKMKQHHRMVKG 172
           TWFANARRRLKKENKMTWEPKNKTDDDDDA+++D  D K+KDDL  D +  +      +G
Sbjct: 270 TWFANARRRLKKENKMTWEPKNKTDDDDDAVLTDSEDNKEKDDLAGDNQGDRVGEEARRG 329


>gi|307177867|gb|EFN66827.1| Homeobox protein caupolican [Camponotus floridanus]
          Length = 503

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 95/107 (88%), Positives = 98/107 (91%), Gaps = 1/107 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  Y AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 30  LAAYGYSAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 89

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDC-DEKDKDDLMMD 159
           TWFANARRRLKKENKMTWEPKNKTDDDDDA++SD  D K+KDDL  D
Sbjct: 90  TWFANARRRLKKENKMTWEPKNKTDDDDDAVLSDSEDNKEKDDLAAD 136


>gi|195378781|ref|XP_002048160.1| GJ11493 [Drosophila virilis]
 gi|194155318|gb|EDW70502.1| GJ11493 [Drosophila virilis]
          Length = 698

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/103 (83%), Positives = 94/103 (91%), Gaps = 1/103 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLA+RRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 232 LAAYGYGPNYDLASRRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 291

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDD 155
           TWFANARRRLKKENKMTWEPKNKT+DDDD ++SD D EK+ ++
Sbjct: 292 TWFANARRRLKKENKMTWEPKNKTEDDDDGLLSDEDKEKEANE 334


>gi|322795140|gb|EFZ17980.1| hypothetical protein SINV_14587 [Solenopsis invicta]
          Length = 196

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 94/104 (90%), Positives = 98/104 (94%), Gaps = 1/104 (0%)

Query: 57  VRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
            RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 2   FRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 61

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISDC-DEKDKDDLMMD 159
           ANARRRLKKENKMTWEPKNKTDDDDDA+++D  D K+KDDL  D
Sbjct: 62  ANARRRLKKENKMTWEPKNKTDDDDDAVLTDSEDNKEKDDLASD 105


>gi|195126385|ref|XP_002007651.1| GI12262 [Drosophila mojavensis]
 gi|193919260|gb|EDW18127.1| GI12262 [Drosophila mojavensis]
          Length = 718

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 83/94 (88%), Positives = 88/94 (93%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLA+RRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 242 LAAYGYGPNYDLASRRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 301

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISD 147
           TWFANARRRLKKENKMTWEPKNKT+DDDD ++SD
Sbjct: 302 TWFANARRRLKKENKMTWEPKNKTEDDDDGLLSD 335


>gi|242023064|ref|XP_002431956.1| iroquois-class homeodomain protein irx, putative [Pediculus humanus
           corporis]
 gi|212517307|gb|EEB19218.1| iroquois-class homeodomain protein irx, putative [Pediculus humanus
           corporis]
          Length = 160

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/115 (87%), Positives = 105/115 (91%)

Query: 56  AVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           + RY AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 27  STRYSAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 86

Query: 116 FANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMV 170
           FANARRRLKKENKMTWEPKNKTDDDDDAI+SD D+KDKDDL  D EK+K   R V
Sbjct: 87  FANARRRLKKENKMTWEPKNKTDDDDDAIVSDTDDKDKDDLSYDSEKVKDRLREV 141


>gi|242016451|ref|XP_002428822.1| Homeobox protein Hox-A7, putative [Pediculus humanus corporis]
 gi|212513534|gb|EEB16084.1| Homeobox protein Hox-A7, putative [Pediculus humanus corporis]
          Length = 164

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/113 (89%), Positives = 104/113 (92%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RY AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 26  RYSAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 85

Query: 118 NARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMV 170
           NARRRLKKENKMTWEPKNKTDDDDDAI+SD D+KDKDDL  D EK+K   R V
Sbjct: 86  NARRRLKKENKMTWEPKNKTDDDDDAIVSDTDDKDKDDLSYDSEKVKDRLREV 138


>gi|195454705|ref|XP_002074363.1| GK10560 [Drosophila willistoni]
 gi|194170448|gb|EDW85349.1| GK10560 [Drosophila willistoni]
          Length = 736

 Score =  175 bits (444), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 88/107 (82%), Positives = 99/107 (92%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           ++A  YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 218 MSAYGYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 277

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDE 160
           TWFANARRRLKKENKMTWEPKN+ DDDDDA++SD +++ K+D+  D+
Sbjct: 278 TWFANARRRLKKENKMTWEPKNRADDDDDALVSDEEKERKEDMEADK 324


>gi|158293795|ref|XP_315117.4| AGAP005010-PA [Anopheles gambiae str. PEST]
 gi|157016617|gb|EAA10465.4| AGAP005010-PA [Anopheles gambiae str. PEST]
          Length = 782

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 81/84 (96%), Positives = 81/84 (96%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 195 LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 254

Query: 114 TWFANARRRLKKENKMTWEPKNKT 137
           TWFANARRRLKKENKMTWEPKNKT
Sbjct: 255 TWFANARRRLKKENKMTWEPKNKT 278


>gi|195493895|ref|XP_002094609.1| GE21912 [Drosophila yakuba]
 gi|194180710|gb|EDW94321.1| GE21912 [Drosophila yakuba]
          Length = 719

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/118 (81%), Positives = 104/118 (88%), Gaps = 3/118 (2%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           ++A  YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 241 MSAYGYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 300

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
           TWFANARRRLKKENKMTWEPKN+TDDDDDA++SD DEKDK+DL  +  K  Q   + K
Sbjct: 301 TWFANARRRLKKENKMTWEPKNRTDDDDDALVSD-DEKDKEDL--EPSKGSQSGSLAK 355


>gi|194747627|ref|XP_001956253.1| GF24688 [Drosophila ananassae]
 gi|190623535|gb|EDV39059.1| GF24688 [Drosophila ananassae]
          Length = 731

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/103 (89%), Positives = 99/103 (96%), Gaps = 1/103 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           ++A  YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 237 MSAYGYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 296

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           TWFANARRRLKKENKMTWEPKN+TDDDDDA++SD DEKDK+D+
Sbjct: 297 TWFANARRRLKKENKMTWEPKNRTDDDDDALVSD-DEKDKEDM 338


>gi|281366150|ref|NP_001163432.1| araucan, isoform B [Drosophila melanogaster]
 gi|272455181|gb|ACZ94703.1| araucan, isoform B [Drosophila melanogaster]
          Length = 709

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/103 (90%), Positives = 99/103 (96%), Gaps = 1/103 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           ++A  YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 236 MSAYGYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 295

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           TWFANARRRLKKENKMTWEPKN+TDDDDDA++SD DEKDK+DL
Sbjct: 296 TWFANARRRLKKENKMTWEPKNRTDDDDDALVSD-DEKDKEDL 337


>gi|195589878|ref|XP_002084676.1| GD14388 [Drosophila simulans]
 gi|194196685|gb|EDX10261.1| GD14388 [Drosophila simulans]
          Length = 597

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/103 (90%), Positives = 99/103 (96%), Gaps = 1/103 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           ++A  YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 123 MSAYGYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 182

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           TWFANARRRLKKENKMTWEPKN+TDDDDDA++SD DEKDK+DL
Sbjct: 183 TWFANARRRLKKENKMTWEPKNRTDDDDDALVSD-DEKDKEDL 224


>gi|189235456|ref|XP_971623.2| PREDICTED: iroquois-like protein [Tribolium castaneum]
          Length = 632

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 81/84 (96%), Positives = 81/84 (96%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 168 LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 227

Query: 114 TWFANARRRLKKENKMTWEPKNKT 137
           TWFANARRRLKKENKMTWEPKNKT
Sbjct: 228 TWFANARRRLKKENKMTWEPKNKT 251


>gi|157116231|ref|XP_001658393.1| iroquois-class homeodomain protein irx [Aedes aegypti]
 gi|108876562|gb|EAT40787.1| AAEL007505-PA [Aedes aegypti]
          Length = 363

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 81/84 (96%), Positives = 81/84 (96%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 98  LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 157

Query: 114 TWFANARRRLKKENKMTWEPKNKT 137
           TWFANARRRLKKENKMTWEPKNKT
Sbjct: 158 TWFANARRRLKKENKMTWEPKNKT 181


>gi|270004888|gb|EFA01336.1| iroquois-like protein [Tribolium castaneum]
          Length = 547

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 81/84 (96%), Positives = 81/84 (96%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 246 LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 305

Query: 114 TWFANARRRLKKENKMTWEPKNKT 137
           TWFANARRRLKKENKMTWEPKNKT
Sbjct: 306 TWFANARRRLKKENKMTWEPKNKT 329


>gi|195019756|ref|XP_001985048.1| GH14715 [Drosophila grimshawi]
 gi|193898530|gb|EDV97396.1| GH14715 [Drosophila grimshawi]
          Length = 791

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/141 (60%), Positives = 101/141 (71%), Gaps = 21/141 (14%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           ++A  YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 234 MSAYGYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 293

Query: 114 TWFANARRRLKKENKMTWEPKNKT--------------------DDDDDAIISDCDEKDK 153
           TWFANARRRLKKENKMTWEPKN+T                    + D  ++  D   KD+
Sbjct: 294 TWFANARRRLKKENKMTWEPKNRTDDDDDALVSDDEKDKDDVDSNKDGGSLAKDV-AKDE 352

Query: 154 DDLMMDEEKMKQHHRMVKGHF 174
           ++L+ +E+K      +++  F
Sbjct: 353 EELIDEEQKQLGQANILRAGF 373


>gi|54650768|gb|AAV36963.1| LP02208p [Drosophila melanogaster]
          Length = 650

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/103 (90%), Positives = 99/103 (96%), Gaps = 1/103 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           ++A  YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 236 MSAYGYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 295

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           TWFANARRRLKKENKMTWEPKN+TDDDDDA++SD DEKDK+DL
Sbjct: 296 TWFANARRRLKKENKMTWEPKNRTDDDDDALVSD-DEKDKEDL 337


>gi|195327183|ref|XP_002030301.1| GM25355 [Drosophila sechellia]
 gi|194119244|gb|EDW41287.1| GM25355 [Drosophila sechellia]
          Length = 384

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/103 (90%), Positives = 99/103 (96%), Gaps = 1/103 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           ++A  YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 236 MSAYGYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 295

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           TWFANARRRLKKENKMTWEPKN+TDDDDDA++SD DEKDK+DL
Sbjct: 296 TWFANARRRLKKENKMTWEPKNRTDDDDDALVSD-DEKDKEDL 337


>gi|194869979|ref|XP_001972561.1| GG15584 [Drosophila erecta]
 gi|190654344|gb|EDV51587.1| GG15584 [Drosophila erecta]
          Length = 727

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/121 (80%), Positives = 105/121 (86%), Gaps = 6/121 (4%)

Query: 51  VSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLT 110
           VSN +   YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLT
Sbjct: 254 VSNSS---YGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLT 310

Query: 111 QVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMV 170
           QVSTWFANARRRLKKENKMTWEPKN+TDDDDDA++SD DEKDK+DL  +  K  Q   + 
Sbjct: 311 QVSTWFANARRRLKKENKMTWEPKNRTDDDDDALVSD-DEKDKEDL--EPSKGSQSGSLA 367

Query: 171 K 171
           K
Sbjct: 368 K 368


>gi|198464912|ref|XP_001353411.2| GA10403 [Drosophila pseudoobscura pseudoobscura]
 gi|198149933|gb|EAL30918.2| GA10403 [Drosophila pseudoobscura pseudoobscura]
          Length = 780

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 92/98 (93%), Positives = 96/98 (97%), Gaps = 1/98 (1%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 245 YGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 304

Query: 119 ARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           ARRRLKKENKMTWEPKN+TDDDDDA++SD DEKDK+DL
Sbjct: 305 ARRRLKKENKMTWEPKNRTDDDDDALVSD-DEKDKEDL 341


>gi|47155829|gb|AAT11862.1| iroquois-like protein [Tribolium castaneum]
          Length = 242

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 92/102 (90%), Positives = 98/102 (96%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 73  LAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 132

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDD 155
           TWFANARRRLKKENKMTWEPKNKTDDDDDA++SD D+++KD+
Sbjct: 133 TWFANARRRLKKENKMTWEPKNKTDDDDDALVSDSDDREKDE 174


>gi|195126387|ref|XP_002007652.1| GI12261 [Drosophila mojavensis]
 gi|193919261|gb|EDW18128.1| GI12261 [Drosophila mojavensis]
          Length = 745

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 86/143 (60%), Positives = 100/143 (69%), Gaps = 23/143 (16%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           ++A  YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 224 MSAYGYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 283

Query: 114 TWFANARRRLKKENKMTWEPKNKT----------------------DDDDDAIISDCDEK 151
           TWFANARRRLKKENKMTWEPKN+T                      D    ++  D   K
Sbjct: 284 TWFANARRRLKKENKMTWEPKNRTDDDDDALVSDDEKDKDDVESTKDSHGGSLAKDV-AK 342

Query: 152 DKDDLMMDEEKMKQHHRMVKGHF 174
           D++DL+ +++K      +++  F
Sbjct: 343 DEEDLIDEDQKSLGQANILRAGF 365


>gi|312376040|gb|EFR23249.1| hypothetical protein AND_13242 [Anopheles darlingi]
          Length = 233

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 92/126 (73%), Positives = 95/126 (75%), Gaps = 16/126 (12%)

Query: 26  NISSTKVPALQSRRQLCGIDKQVIQVSNLTAVR--------------YGAGYDLAARRKN 71
           NISS +    Q R+Q     K VI   +  AVR              YGAGYDLAARRKN
Sbjct: 39  NISSKQDEQKQQRKQRSTRQKWVIM--DAAAVRMTSLIVCVVCDIPWYGAGYDLAARRKN 96

Query: 72  ATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 131
           ATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW
Sbjct: 97  ATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 156

Query: 132 EPKNKT 137
           EPKNKT
Sbjct: 157 EPKNKT 162


>gi|24663380|ref|NP_524045.2| araucan, isoform A [Drosophila melanogaster]
 gi|19863700|sp|Q24248.2|ARA_DROME RecName: Full=Homeobox protein araucan
 gi|7294555|gb|AAF49896.1| araucan, isoform A [Drosophila melanogaster]
          Length = 717

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 92/98 (93%), Positives = 96/98 (97%), Gaps = 1/98 (1%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 249 YGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 308

Query: 119 ARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           ARRRLKKENKMTWEPKN+TDDDDDA++SD DEKDK+DL
Sbjct: 309 ARRRLKKENKMTWEPKNRTDDDDDALVSD-DEKDKEDL 345


>gi|1212885|emb|CAA64486.1| araucan homeoprotein [Drosophila melanogaster]
          Length = 716

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 92/98 (93%), Positives = 96/98 (97%), Gaps = 1/98 (1%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 248 YGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 307

Query: 119 ARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           ARRRLKKENKMTWEPKN+TDDDDDA++SD DEKDK+DL
Sbjct: 308 ARRRLKKENKMTWEPKNRTDDDDDALVSD-DEKDKEDL 344


>gi|74054137|gb|AAZ95458.1| caupolican-like protein [Calliphora vicina]
          Length = 626

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 88/126 (69%), Positives = 100/126 (79%), Gaps = 8/126 (6%)

Query: 56  AVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           A  YGA YDLA+RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 261 AYGYGASYDLASRRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 320

Query: 116 FANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL--------MMDEEKMKQHH 167
           FANARRRLKKENKMTWEPKN+T+DDDD  +   DEK+ +          M  ++ +K+H 
Sbjct: 321 FANARRRLKKENKMTWEPKNRTEDDDDDAMLSDDEKELEKTDKAGAGGNMYGQQMLKEHD 380

Query: 168 RMVKGH 173
           ++   H
Sbjct: 381 QLKNNH 386


>gi|195378783|ref|XP_002048161.1| GJ11492 [Drosophila virilis]
 gi|194155319|gb|EDW70503.1| GJ11492 [Drosophila virilis]
          Length = 756

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 78/84 (92%), Positives = 81/84 (96%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           ++A  YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 237 MSAYGYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 296

Query: 114 TWFANARRRLKKENKMTWEPKNKT 137
           TWFANARRRLKKENKMTWEPKN+T
Sbjct: 297 TWFANARRRLKKENKMTWEPKNRT 320


>gi|195160679|ref|XP_002021202.1| GL25202 [Drosophila persimilis]
 gi|194118315|gb|EDW40358.1| GL25202 [Drosophila persimilis]
          Length = 473

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/98 (93%), Positives = 96/98 (97%), Gaps = 1/98 (1%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 267 YGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 326

Query: 119 ARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           ARRRLKKENKMTWEPKN+TDDDDDA++SD DEKDK+DL
Sbjct: 327 ARRRLKKENKMTWEPKNRTDDDDDALVSD-DEKDKEDL 363


>gi|195454701|ref|XP_002074361.1| GK10562 [Drosophila willistoni]
 gi|194170446|gb|EDW85347.1| GK10562 [Drosophila willistoni]
          Length = 661

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/101 (90%), Positives = 94/101 (93%), Gaps = 1/101 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 222 LAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 281

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKD 154
           TWFANARRRLKKENKMTWEPKNKT+DDDD +ISD DEKDKD
Sbjct: 282 TWFANARRRLKKENKMTWEPKNKTEDDDDNLISD-DEKDKD 321


>gi|170027820|ref|XP_001841795.1| iroquois-class homeodomain protein irx [Culex quinquefasciatus]
 gi|167862365|gb|EDS25748.1| iroquois-class homeodomain protein irx [Culex quinquefasciatus]
          Length = 158

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/81 (98%), Positives = 80/81 (98%)

Query: 57  VRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
            RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 11  ARYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 70

Query: 117 ANARRRLKKENKMTWEPKNKT 137
           ANARRRLKKENKMTWEPKNKT
Sbjct: 71  ANARRRLKKENKMTWEPKNKT 91


>gi|194747625|ref|XP_001956252.1| GF24689 [Drosophila ananassae]
 gi|190623534|gb|EDV39058.1| GF24689 [Drosophila ananassae]
          Length = 663

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/121 (74%), Positives = 100/121 (82%), Gaps = 3/121 (2%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 220 LAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 279

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDDLM--MDEEKMKQHHRMV 170
           TWFANARRRLKKENKMTWEPKNKT+DDDD ++SD + EKD  D    +  E     ++++
Sbjct: 280 TWFANARRRLKKENKMTWEPKNKTEDDDDGLMSDDEKEKDSADASGKLSSEAFDPGNQLI 339

Query: 171 K 171
           K
Sbjct: 340 K 340


>gi|198464914|ref|XP_001353412.2| GA10434 [Drosophila pseudoobscura pseudoobscura]
 gi|198149934|gb|EAL30919.2| GA10434 [Drosophila pseudoobscura pseudoobscura]
          Length = 682

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 78/85 (91%), Positives = 80/85 (94%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 219 LAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 278

Query: 114 TWFANARRRLKKENKMTWEPKNKTD 138
           TWFANARRRLKKENKMTWEPKNKT+
Sbjct: 279 TWFANARRRLKKENKMTWEPKNKTE 303


>gi|195589880|ref|XP_002084677.1| GD14390 [Drosophila simulans]
 gi|194196686|gb|EDX10262.1| GD14390 [Drosophila simulans]
          Length = 687

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 88/103 (85%), Positives = 93/103 (90%), Gaps = 1/103 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 217 LAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 276

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDD 155
           TWFANARRRLKKENKMTWEPKNKT+DDDD ++SD + EKD  D
Sbjct: 277 TWFANARRRLKKENKMTWEPKNKTEDDDDGMMSDDEKEKDAGD 319


>gi|54650584|gb|AAV36871.1| RE59515p [Drosophila melanogaster]
          Length = 693

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 88/103 (85%), Positives = 93/103 (90%), Gaps = 1/103 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 215 LAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 274

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDD 155
           TWFANARRRLKKENKMTWEPKNKT+DDDD ++SD + EKD  D
Sbjct: 275 TWFANARRRLKKENKMTWEPKNKTEDDDDGMMSDDEKEKDAGD 317


>gi|24663384|ref|NP_524046.2| caupolican [Drosophila melanogaster]
 gi|19860750|sp|P54269.2|CAUP_DROME RecName: Full=Homeobox protein caupolican
 gi|7294554|gb|AAF49895.1| caupolican [Drosophila melanogaster]
 gi|60677775|gb|AAX33394.1| RE64213p [Drosophila melanogaster]
 gi|220945950|gb|ACL85518.1| caup-PA [synthetic construct]
          Length = 693

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 88/103 (85%), Positives = 93/103 (90%), Gaps = 1/103 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 215 LAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 274

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDD 155
           TWFANARRRLKKENKMTWEPKNKT+DDDD ++SD + EKD  D
Sbjct: 275 TWFANARRRLKKENKMTWEPKNKTEDDDDGMMSDDEKEKDAGD 317


>gi|195160683|ref|XP_002021204.1| GL25204 [Drosophila persimilis]
 gi|194118317|gb|EDW40360.1| GL25204 [Drosophila persimilis]
          Length = 688

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 78/85 (91%), Positives = 80/85 (94%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 221 LAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 280

Query: 114 TWFANARRRLKKENKMTWEPKNKTD 138
           TWFANARRRLKKENKMTWEPKNKT+
Sbjct: 281 TWFANARRRLKKENKMTWEPKNKTE 305


>gi|195493897|ref|XP_002094610.1| GE21913 [Drosophila yakuba]
 gi|194180711|gb|EDW94322.1| GE21913 [Drosophila yakuba]
          Length = 689

 Score =  166 bits (419), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 88/103 (85%), Positives = 93/103 (90%), Gaps = 1/103 (0%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 218 LAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 277

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDD 155
           TWFANARRRLKKENKMTWEPKNKT+DDDD ++SD + EKD  D
Sbjct: 278 TWFANARRRLKKENKMTWEPKNKTEDDDDGMMSDDEKEKDAGD 320


>gi|1212887|emb|CAA64485.1| caupolican homeoprotein [Drosophila melanogaster]
          Length = 693

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/120 (75%), Positives = 100/120 (83%), Gaps = 2/120 (1%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 215 LAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 274

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCD-EKD-KDDLMMDEEKMKQHHRMVK 171
           TWFANARRRLKKENKMTWEPKNKT+DDDD ++SD + EKD  D   +  E     ++++K
Sbjct: 275 TWFANARRRLKKENKMTWEPKNKTEDDDDGMMSDDEKEKDAADGGKLSTEAFDPGNQLIK 334


>gi|195327189|ref|XP_002030304.1| GM25358 [Drosophila sechellia]
 gi|194119247|gb|EDW41290.1| GM25358 [Drosophila sechellia]
          Length = 680

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 78/85 (91%), Positives = 80/85 (94%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 215 LAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 274

Query: 114 TWFANARRRLKKENKMTWEPKNKTD 138
           TWFANARRRLKKENKMTWEPKNKT+
Sbjct: 275 TWFANARRRLKKENKMTWEPKNKTE 299


>gi|195019751|ref|XP_001985047.1| GH14716 [Drosophila grimshawi]
 gi|193898529|gb|EDV97395.1| GH14716 [Drosophila grimshawi]
          Length = 733

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/120 (75%), Positives = 101/120 (84%), Gaps = 3/120 (2%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLA+RRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 223 LAAYGYGPNYDLASRRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 282

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKGH 173
           TWFANARRRLKKENKMTWEPKNKT+DDDD ++SD DEKDK+ +  +  K++       GH
Sbjct: 283 TWFANARRRLKKENKMTWEPKNKTEDDDDGLMSD-DEKDKEPI--EGTKLQASDTFDPGH 339


>gi|194869983|ref|XP_001972562.1| GG15585 [Drosophila erecta]
 gi|190654345|gb|EDV51588.1| GG15585 [Drosophila erecta]
          Length = 813

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 78/85 (91%), Positives = 80/85 (94%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           L A  YG  YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 336 LAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 395

Query: 114 TWFANARRRLKKENKMTWEPKNKTD 138
           TWFANARRRLKKENKMTWEPKNKT+
Sbjct: 396 TWFANARRRLKKENKMTWEPKNKTE 420


>gi|240960568|ref|XP_002400564.1| Iroquois-class homeobox protein IRX, putative [Ixodes scapularis]
 gi|215490706|gb|EEC00349.1| Iroquois-class homeobox protein IRX, putative [Ixodes scapularis]
          Length = 468

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/115 (70%), Positives = 92/115 (80%), Gaps = 6/115 (5%)

Query: 52  SNLTAVRYGAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLT 110
           ++ T +RYG G D   ARRKN TR+ST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLT
Sbjct: 4   AHWTKLRYG-GLDFNGARRKNVTRDSTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLT 62

Query: 111 QVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQ 165
           QVSTWFANARRRLKKENKMTWEP+NK D DD    S  D+KD +D M +   + Q
Sbjct: 63  QVSTWFANARRRLKKENKMTWEPRNKADADD----SGEDKKDDEDTMEERTSIAQ 113


>gi|432852740|ref|XP_004067361.1| PREDICTED: iroquois-class homeodomain protein IRX-6-like [Oryzias
           latipes]
          Length = 493

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/99 (78%), Positives = 84/99 (84%), Gaps = 4/99 (4%)

Query: 58  RYG-AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG   ++  ARRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 143 RYGTVDFNGTARRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 202

Query: 117 ANARRRLKKENKMTWEPKNKTDDD--DDAIISDC-DEKD 152
           ANARRRLKKENKMTW PKNKT DD  DD   SDC +EKD
Sbjct: 203 ANARRRLKKENKMTWSPKNKTSDDRKDDLNSSDCKEEKD 241


>gi|313221761|emb|CBY38850.1| unnamed protein product [Oikopleura dioica]
          Length = 484

 Score =  152 bits (384), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 81/119 (68%), Positives = 87/119 (73%), Gaps = 3/119 (2%)

Query: 59  YGAGYDLA--ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           YGA  D++   RRKNATREST TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 190 YGAYNDMSDGVRRKNATRESTNTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 249

Query: 117 ANARRRLKKENKMTWEPKNK-TDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKGHF 174
           ANARRRLKKENKMTW PKN+ TD +DD      +E +KD    D       H   K  F
Sbjct: 250 ANARRRLKKENKMTWVPKNRATDGEDDESNGLGEENEKDGEKDDAVAFPTDHDREKVEF 308


>gi|313236525|emb|CBY11839.1| unnamed protein product [Oikopleura dioica]
          Length = 397

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 81/119 (68%), Positives = 87/119 (73%), Gaps = 3/119 (2%)

Query: 59  YGAGYDLA--ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           YGA  D++   RRKNATREST TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 103 YGAYNDMSDGVRRKNATRESTNTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 162

Query: 117 ANARRRLKKENKMTWEPKNK-TDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKGHF 174
           ANARRRLKKENKMTW PKN+ TD +DD      +E +KD    D       H   K  F
Sbjct: 163 ANARRRLKKENKMTWVPKNRATDGEDDESNGLGEENEKDGEKDDAVAFPTDHDREKVEF 221


>gi|66472814|ref|NP_001018329.1| iroquois homeobox protein 4b [Danio rerio]
 gi|57164998|gb|AAW34338.1| Iroquois 4b protein [Danio rerio]
          Length = 439

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/117 (65%), Positives = 86/117 (73%), Gaps = 6/117 (5%)

Query: 58  RYGAG-YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG G  D+  RRKNATRE+T+TLKAWL EHKKNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 131 RYGYGSVDVGTRRKNATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 190

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKGH 173
           ANARRRLKKENKMTW P+NK  D+      +CD+  +D     EE +K        H
Sbjct: 191 ANARRRLKKENKMTWSPRNKNSDE-----KECDDDQEDLDEAQEEPIKTEQDFDDNH 242


>gi|260834613|ref|XP_002612304.1| iroquois 3 [Branchiostoma floridae]
 gi|229297681|gb|EEN68313.1| iroquois 3 [Branchiostoma floridae]
          Length = 494

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/106 (67%), Positives = 87/106 (82%), Gaps = 2/106 (1%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 128
           RKNATR++T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
Sbjct: 136 RKNATRDATSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 195

Query: 129 MTWEPKNKTDDD--DDAIISDCDEKDKDDLMMDEEKMKQHHRMVKG 172
           MTW P+NK+ D+  +D   S+ +  D+D     E+K ++  R ++G
Sbjct: 196 MTWSPRNKSGDERREDGSDSENENDDEDGREGGEDKNQEDDRGLEG 241


>gi|193083641|gb|ACF10241.1| iroquois C [Branchiostoma floridae]
          Length = 494

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/106 (66%), Positives = 87/106 (82%), Gaps = 2/106 (1%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 128
           RKNATR++T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
Sbjct: 136 RKNATRDATSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 195

Query: 129 MTWEPKNKTDDD--DDAIISDCDEKDKDDLMMDEEKMKQHHRMVKG 172
           MTW P+NK+ D+  +D   S+ +  D+D     E++ ++  R ++G
Sbjct: 196 MTWSPRNKSGDERREDGSDSENENDDEDGREGGEDRNQEDDRGLEG 241


>gi|319803138|ref|NP_001018869.1| iroquois-class homeodomain protein IRX-6 [Danio rerio]
 gi|63101785|gb|AAH95113.1| Iroquois homeobox protein 6a [Danio rerio]
 gi|197247298|gb|AAI65182.1| Irx6a protein [Danio rerio]
          Length = 477

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 73/104 (70%), Positives = 82/104 (78%), Gaps = 1/104 (0%)

Query: 58  RYG-AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG   ++ + RRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 140 RYGTVDFNGSTRRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 199

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDE 160
           ANARRRLKKENKMTW PKNK  DD    +   D KD+ DL   +
Sbjct: 200 ANARRRLKKENKMTWSPKNKAGDDRKEDLDSKDSKDEQDLQFSD 243


>gi|324505955|gb|ADY42550.1| Iroquois-class homeodomain protein irx-1 [Ascaris suum]
          Length = 444

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/96 (70%), Positives = 81/96 (84%), Gaps = 1/96 (1%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           Y  G D  ARRKNATRE+TA LK+WLNEH+KNPYPTK EKIMLA++TKMTLTQVSTWFAN
Sbjct: 125 YAGGLD-GARRKNATRETTAPLKSWLNEHRKNPYPTKAEKIMLALLTKMTLTQVSTWFAN 183

Query: 119 ARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKD 154
           ARRRLKKENKMTW P+N+  D++D  ++D D  ++D
Sbjct: 184 ARRRLKKENKMTWSPRNRPGDEEDDDLADIDASERD 219


>gi|364087491|gb|AEW46995.1| iroquois homeobox 3 [Callorhinchus milii]
          Length = 488

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 80/127 (62%), Positives = 92/127 (72%), Gaps = 10/127 (7%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 109 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 168

Query: 127 NKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKMKQHHRMVKGHFPHMYVTKYE 183
           NKMTW P+N+TD++ ++  S+ D   EK  DD  +D E +       KG         YE
Sbjct: 169 NKMTWTPRNRTDEEGNSYSSEPDLEGEKKDDDEEIDLENIDTERIESKGD-------DYE 221

Query: 184 TLPPTNL 190
             P  NL
Sbjct: 222 HDPDLNL 228


>gi|291390135|ref|XP_002711615.1| PREDICTED: iroquois homeobox protein 6 [Oryctolagus cuniculus]
          Length = 474

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/103 (70%), Positives = 82/103 (79%), Gaps = 9/103 (8%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK
Sbjct: 147 AGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 206

Query: 126 ENKMTWEPKNKTDDD-------DDAIISDCDEKDKDDLMMDEE 161
           ENKMTW PKNK  +D       DD++   C + D  D+   +E
Sbjct: 207 ENKMTWAPKNKGGEDRKAEGGADDSL--GCLKGDSKDVTASQE 247


>gi|395839558|ref|XP_003792655.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-6 [Otolemur garnettii]
          Length = 470

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 78/110 (70%), Positives = 84/110 (76%), Gaps = 6/110 (5%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSSAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDD----DDAIIS-DCDEKDKDDLMMDEE 161
           ANARRRLKKENKMTW PKNK  +D     DA  S  C   D  D+   +E
Sbjct: 198 ANARRRLKKENKMTWAPKNKGAEDRKAEGDAEESLGCLNGDSKDVTAGQE 247


>gi|354471677|ref|XP_003498067.1| PREDICTED: iroquois-class homeodomain protein IRX-5-like, partial
           [Cricetulus griseus]
          Length = 377

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/114 (66%), Positives = 94/114 (82%), Gaps = 3/114 (2%)

Query: 51  VSNLTAVRYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMT 108
           +  L+A RYG G +L  A RRKNATREST+ LKAWL+EH+KNPYPTKGEKIMLAIITKMT
Sbjct: 81  IGTLSAHRYG-GVELSGAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMT 139

Query: 109 LTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LTQVSTWFANARRRLKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 140 LTQVSTWFANARRRLKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 193


>gi|432852984|ref|XP_004067483.1| PREDICTED: iroquois-class homeodomain protein irx-3-like [Oryzias
           latipes]
          Length = 528

 Score =  149 bits (376), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 84/97 (86%), Gaps = 1/97 (1%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 109 SRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 168

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKM 163
           NKMTW P+N+TD++ +   SD  E ++ D   DEE++
Sbjct: 169 NKMTWAPRNRTDEEGNVYTSD-HEGEEGDKREDEEEI 204


>gi|339254886|ref|XP_003372666.1| putative iroquois-class homeodomain protein IRX-6 [Trichinella
           spiralis]
 gi|316966866|gb|EFV51389.1| putative iroquois-class homeodomain protein IRX-6 [Trichinella
           spiralis]
          Length = 367

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/141 (56%), Positives = 97/141 (68%), Gaps = 11/141 (7%)

Query: 33  PALQSRRQLCG---IDKQVIQVSNLTAVRYGAGYDL-AARRKNATRESTATLKAWLNEHK 88
           P LQS  Q      +D  +       A R+    DL AARRKNATRE+TA LK+WL EH+
Sbjct: 129 PVLQSSAQTLPAYYLDPALTASYQYAADRFANPLDLNAARRKNATRETTAALKSWLYEHR 188

Query: 89  KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAI---- 144
           KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW P+N++++D++      
Sbjct: 189 KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPRNRSEEDEEQPSTGR 248

Query: 145 ---ISDCDEKDKDDLMMDEEK 162
               +  +E   DDL+  EE+
Sbjct: 249 VNGSASMEEDPLDDLLESEER 269


>gi|441597250|ref|XP_003263104.2| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-6 [Nomascus leucogenys]
          Length = 447

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/110 (68%), Positives = 84/110 (76%), Gaps = 6/110 (5%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISD-----CDEKDKDDLMMDEE 161
           ANARRRLKKENKMTW PKNK  ++  A   +     C   D  D+ + +E
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKAEGGEEDSLGCLNADTKDVTVSQE 247


>gi|344289363|ref|XP_003416413.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Loxodonta
           africana]
          Length = 491

 Score =  149 bits (375), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/110 (68%), Positives = 82/110 (74%), Gaps = 6/110 (5%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIIS-----DCDEKDKDDLMMDEE 161
           ANARRRLKKENKMTW PKNK  ++  A         C   D  D+  + E
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKAEGGVEEPLGCLNSDTKDVAANHE 247


>gi|348500044|ref|XP_003437583.1| PREDICTED: iroquois-class homeodomain protein IRX-6-like
           [Oreochromis niloticus]
          Length = 499

 Score =  149 bits (375), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 71/100 (71%), Positives = 82/100 (82%), Gaps = 1/100 (1%)

Query: 58  RYG-AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG   ++  ARRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 144 RYGTVDFNGTARRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 203

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           ANARRRLKKENKMTW PKNK +DD    ++  ++ D +D 
Sbjct: 204 ANARRRLKKENKMTWSPKNKANDDRKDDLNKSEQDDSNDC 243


>gi|345793918|ref|XP_544401.3| PREDICTED: iroquois-class homeodomain protein IRX-6 [Canis lupus
           familiaris]
          Length = 512

 Score =  149 bits (375), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 75/111 (67%), Positives = 84/111 (75%), Gaps = 8/111 (7%)

Query: 58  RYGAGYDLAA--RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYGA  +L+   RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 137 RYGA-VELSGTGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 195

Query: 116 FANARRRLKKENKMTWEPKNKTDDDDDAIIS-----DCDEKDKDDLMMDEE 161
           FANARRRLKKENKMTW PKNK  ++  A         C   D  D+   +E
Sbjct: 196 FANARRRLKKENKMTWAPKNKGGEERKAESGAEEPLGCLNGDTKDVTASQE 246


>gi|311257249|ref|XP_003127028.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Sus scrofa]
          Length = 524

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 76/113 (67%), Positives = 86/113 (76%), Gaps = 6/113 (5%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDD---DDDAI--ISDCDEKDKDDLMMDEEKMK 164
           ANARRRLKKENKMTW PKNK  +   +D A   +  C   D  D+   +E+ +
Sbjct: 198 ANARRRLKKENKMTWVPKNKGGEERKEDGAAEELLGCLNGDTKDVTASQERQE 250


>gi|193083639|gb|ACF10240.1| iroquois C [Branchiostoma lanceolatum]
          Length = 494

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/118 (63%), Positives = 90/118 (76%), Gaps = 5/118 (4%)

Query: 59  YGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           YG GY     A RKNATR++T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 125 YG-GYGPMDGAPRKNATRDATSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 183

Query: 117 ANARRRLKKENKMTWEPKNKTDDD--DDAIISDCDEKDKDDLMMDEEKMKQHHRMVKG 172
           ANARRRLKKENKMTW P+NK+ D+  +D   S+ D   +D     E++ ++    ++G
Sbjct: 184 ANARRRLKKENKMTWSPRNKSGDERREDGSDSENDNDXEDGREGGEDRNREDDGGLEG 241


>gi|402908405|ref|XP_003916932.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Papio anubis]
          Length = 446

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/104 (71%), Positives = 81/104 (77%), Gaps = 9/104 (8%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNK--------TDDDDDAIISDCDEKD 152
           ANARRRLKKENKMTW PKNK          ++D     +CD K+
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKAEGGEEDSLGCLNCDTKE 241


>gi|348583559|ref|XP_003477540.1| PREDICTED: iroquois-class homeodomain protein IRX-6-like [Cavia
           porcellus]
          Length = 456

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/112 (65%), Positives = 86/112 (76%), Gaps = 10/112 (8%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG   +  A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGGVEFSSAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDD-------DDAIISDCDEKDKDDLMMDEE 161
           ANARRRLKKENKMTW PKNK  ++       ++++   C   D  D+  ++E
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKVEGRVEESL--GCLNGDSKDVPANQE 247


>gi|91079258|ref|XP_971676.1| PREDICTED: similar to iroquois-class homeodomain protein irx
           [Tribolium castaneum]
          Length = 458

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 86/126 (68%), Gaps = 19/126 (15%)

Query: 60  GAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           G G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 155 GYGMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 214

Query: 119 ARRRLKKENKMTWEPKN--------------KTDDDDDAIISDCDEKDKDDLMMDEEKMK 164
           ARRRLKKENKMTWEP+N              K+ D  D +    D KD      ++    
Sbjct: 215 ARRRLKKENKMTWEPRNRVEDEDNNNDDDDHKSTDGKDIL----DSKDSGTASSEDGDRP 270

Query: 165 QHHRMV 170
            H R+ 
Sbjct: 271 PHSRLA 276


>gi|410912248|ref|XP_003969602.1| PREDICTED: iroquois-class homeodomain protein irx-3-like [Takifugu
           rubripes]
          Length = 427

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 84/97 (86%), Gaps = 1/97 (1%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 109 SRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 168

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKM 163
           NKMTW P+N+TD++ +   SD  E ++ D   DEE++
Sbjct: 169 NKMTWTPRNRTDEEGNVYSSD-HEGEEGDKREDEEEI 204


>gi|403292604|ref|XP_003937325.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Saimiri
           boliviensis boliviensis]
          Length = 447

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/110 (68%), Positives = 83/110 (75%), Gaps = 6/110 (5%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISD-----CDEKDKDDLMMDEE 161
           ANARRRLKKENKMTW PKNK  ++  A   +     C   D  D+   +E
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKAEGGEEDSLGCLNADTKDVTASQE 247


>gi|344235909|gb|EGV92012.1| Iroquois-class homeodomain protein IRX-5 [Cricetulus griseus]
          Length = 265

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/114 (66%), Positives = 94/114 (82%), Gaps = 3/114 (2%)

Query: 51  VSNLTAVRYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMT 108
           +  L+A RYG G +L  A RRKNATREST+ LKAWL+EH+KNPYPTKGEKIMLAIITKMT
Sbjct: 3   IGTLSAHRYG-GVELSGAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMT 61

Query: 109 LTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LTQVSTWFANARRRLKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 62  LTQVSTWFANARRRLKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 115


>gi|340716066|ref|XP_003396524.1| PREDICTED: homeobox protein araucan-like [Bombus terrestris]
          Length = 612

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 91/122 (74%), Gaps = 12/122 (9%)

Query: 60  GAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           G G DL  ARRKNATRE+T+TLKAWLN+HKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 204 GYGMDLNGARRKNATRETTSTLKAWLNDHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 263

Query: 119 ARRRLKKENKMTWEPKNKTDDDDDAIIS------DCDEKDKDD-----LMMDEEKMKQHH 167
           ARRRLKKENKMTWEP+N+ +D+D+            DEKD+ D         E+  +  H
Sbjct: 264 ARRRLKKENKMTWEPRNRVEDEDNNNEDDDSGRKSVDEKDRLDSKDSGTGSSEDGERPAH 323

Query: 168 RM 169
           RM
Sbjct: 324 RM 325


>gi|296231094|ref|XP_002761004.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Callithrix
           jacchus]
          Length = 499

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/100 (73%), Positives = 82/100 (82%), Gaps = 6/100 (6%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           ANARRRLKKENKMTW PKNK  ++  A     + +++D L
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKA-----EGREEDSL 232


>gi|297698742|ref|XP_002826472.1| PREDICTED: uncharacterized protein LOC100448844 [Pongo abelii]
          Length = 440

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/89 (76%), Positives = 82/89 (92%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDD 155
           NKMTW P+++TD++ +A  S+ +E+D+ +
Sbjct: 189 NKMTWAPRSRTDEEGNAYGSEREEEDQKE 217


>gi|47204030|emb|CAG14759.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 375

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 84/97 (86%), Gaps = 1/97 (1%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 109 SRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 168

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKM 163
           NKMTW P+N+TD++ +   SD  E ++ D   DEE++
Sbjct: 169 NKMTWTPRNRTDEEGNVYSSD-HEGEEGDKREDEEEI 204


>gi|118343852|ref|NP_001071748.1| transcription factor protein [Ciona intestinalis]
 gi|70570014|dbj|BAE06521.1| transcription factor protein [Ciona intestinalis]
          Length = 697

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/121 (64%), Positives = 86/121 (71%), Gaps = 18/121 (14%)

Query: 58  RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RY  G D+    RRKNATREST TLKAWL EHKKNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 98  RY-CGVDMNDGVRRKNATRESTNTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 156

Query: 116 FANARRRLKKENKMTWEPKNKT---------------DDDDDAIISDCDEKDKDDLMMDE 160
           FANARRRLKKENKMTW PKN++               DDD ++   DCD+K   D  +D 
Sbjct: 157 FANARRRLKKENKMTWVPKNRSNENASSTDEKKIDPDDDDSNSQNQDCDDKIDADQSLDS 216

Query: 161 E 161
           +
Sbjct: 217 D 217


>gi|270004889|gb|EFA01337.1| mirror [Tribolium castaneum]
          Length = 533

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 86/126 (68%), Gaps = 19/126 (15%)

Query: 60  GAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           G G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 126 GYGMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 185

Query: 119 ARRRLKKENKMTWEPKN--------------KTDDDDDAIISDCDEKDKDDLMMDEEKMK 164
           ARRRLKKENKMTWEP+N              K+ D  D +    D KD      ++    
Sbjct: 186 ARRRLKKENKMTWEPRNRVEDEDNNNDDDDHKSTDGKDIL----DSKDSGTASSEDGDRP 241

Query: 165 QHHRMV 170
            H R+ 
Sbjct: 242 PHSRLA 247


>gi|395747841|ref|XP_002826469.2| PREDICTED: iroquois-class homeodomain protein IRX-6 [Pongo abelii]
          Length = 446

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 77/87 (88%), Gaps = 1/87 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A+RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGASRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDA 143
           ANARRRLKKENKMTW PKNK  ++  A
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKA 224


>gi|158293797|ref|XP_315118.4| AGAP005011-PA [Anopheles gambiae str. PEST]
 gi|157016618|gb|EAA10468.4| AGAP005011-PA [Anopheles gambiae str. PEST]
          Length = 575

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/78 (88%), Positives = 74/78 (94%), Gaps = 1/78 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 207 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 266

Query: 121 RRLKKENKMTWEPKNKTD 138
           RRLKKENKMTWEP+N+ +
Sbjct: 267 RRLKKENKMTWEPRNRVE 284


>gi|444725601|gb|ELW66162.1| Iroquois-class homeodomain protein IRX-6 [Tupaia chinensis]
          Length = 465

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 82/110 (74%), Gaps = 6/110 (5%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG+     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 108 RYGSVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 167

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIIS-----DCDEKDKDDLMMDEE 161
           ANARRRLKKENKMTW PKNK  ++  A         C   D  D+   +E
Sbjct: 168 ANARRRLKKENKMTWAPKNKGGEERKAEGGGEEPLGCLNGDTKDITASQE 217


>gi|47085839|ref|NP_998265.1| iroquois homeobox protein 3b [Danio rerio]
 gi|44890542|gb|AAH66730.1| Iroquois homeobox protein 3b [Danio rerio]
          Length = 343

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/105 (71%), Positives = 85/105 (80%), Gaps = 4/105 (3%)

Query: 59  YGAGYDLA--ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           YG  Y     +R KNATREST+TLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 93  YGHQYQFGDPSRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 152

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEE 161
           ANARRRLKKENKMTW PK +TD+D +   SD ++ +K D   DEE
Sbjct: 153 ANARRRLKKENKMTWVPKTRTDEDGNVYTSDNEDAEKRD--EDEE 195


>gi|355756780|gb|EHH60388.1| Iroquois homeobox protein 6, partial [Macaca fascicularis]
          Length = 444

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 1/87 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDA 143
           ANARRRLKKENKMTW PKNK  ++  A
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKA 224


>gi|410912204|ref|XP_003969580.1| PREDICTED: iroquois-class homeodomain protein IRX-6-like [Takifugu
           rubripes]
          Length = 491

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 89/118 (75%), Gaps = 13/118 (11%)

Query: 58  RYG-AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG   ++  ARRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 143 RYGTVDFNGTARRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 202

Query: 117 ANARRRLKKENKMTWEPKNKTDDD---------DDAIISDCDEKDKDDLMMDEEKMKQ 165
           ANARRRLKKENKMTW PKNK  +D         DD++  DC E +KD  + D E M +
Sbjct: 203 ANARRRLKKENKMTWSPKNKAGEDRKDDLKSDQDDSV--DCKE-EKDLHLSDLEDMDE 257


>gi|355710201|gb|EHH31665.1| Iroquois homeobox protein 6, partial [Macaca mulatta]
          Length = 443

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 1/87 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDA 143
           ANARRRLKKENKMTW PKNK  ++  A
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKA 224


>gi|297284001|ref|XP_001087101.2| PREDICTED: iroquois-class homeodomain protein IRX-6 [Macaca
           mulatta]
          Length = 445

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 1/87 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDA 143
           ANARRRLKKENKMTW PKNK  ++  A
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKA 224


>gi|332845939|ref|XP_001167355.2| PREDICTED: iroquois-class homeodomain protein IRX-6 [Pan
           troglodytes]
          Length = 445

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 1/87 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDA 143
           ANARRRLKKENKMTW PKNK  ++  A
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKA 224


>gi|348500050|ref|XP_003437586.1| PREDICTED: iroquois-class homeodomain protein irx-3-like
           [Oreochromis niloticus]
          Length = 438

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 83/97 (85%), Gaps = 1/97 (1%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 109 SRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 168

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKM 163
           NKMTW P+N+TD++ +   SD  E  + D   DEE++
Sbjct: 169 NKMTWTPRNRTDEEGNVYTSD-HEGGEGDKREDEEEI 204


>gi|124111352|gb|ABM92083.1| IRX6 [Pan troglodytes]
          Length = 428

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 1/87 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 122 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 181

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDA 143
           ANARRRLKKENKMTW PKNK  ++  A
Sbjct: 182 ANARRRLKKENKMTWAPKNKGGEERKA 208


>gi|42544241|ref|NP_077311.2| iroquois-class homeodomain protein IRX-6 [Homo sapiens]
 gi|116242594|sp|P78412.3|IRX6_HUMAN RecName: Full=Iroquois-class homeodomain protein IRX-6; AltName:
           Full=Homeodomain protein IRXB3; AltName: Full=Iroquois
           homeobox protein 6
 gi|34531018|dbj|BAC86033.1| unnamed protein product [Homo sapiens]
 gi|119603229|gb|EAW82823.1| iroquois homeobox protein 6, isoform CRA_b [Homo sapiens]
 gi|187951505|gb|AAI36577.1| Iroquois homeobox 6 [Homo sapiens]
 gi|187953279|gb|AAI36574.1| Iroquois homeobox 6 [Homo sapiens]
 gi|208966608|dbj|BAG73318.1| iroquois homeobox 6 [synthetic construct]
          Length = 446

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 1/87 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDA 143
           ANARRRLKKENKMTW PKNK  ++  A
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKA 224


>gi|397480519|ref|XP_003811529.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Pan paniscus]
          Length = 445

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 1/87 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDA 143
           ANARRRLKKENKMTW PKNK  ++  A
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKA 224


>gi|33356593|gb|AAQ16543.1| homeodomain protein IRXB3 [Homo sapiens]
 gi|33356611|gb|AAQ16552.1| homeodomain protein IRXB3 [Homo sapiens]
 gi|119603228|gb|EAW82822.1| iroquois homeobox protein 6, isoform CRA_a [Homo sapiens]
          Length = 445

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 1/87 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDA 143
           ANARRRLKKENKMTW PKNK  ++  A
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKA 224


>gi|405969201|gb|EKC34186.1| Homeobox protein araucan [Crassostrea gigas]
          Length = 493

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/94 (77%), Positives = 78/94 (82%), Gaps = 5/94 (5%)

Query: 54  LTAVRYG---AGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMT 108
           + A  YG    G DL  AARRKNATRE+T TLKAWL EH+KNPYPTKGEKIMLAIITKMT
Sbjct: 133 MAAYPYGNAYGGMDLNGAARRKNATRETTNTLKAWLYEHRKNPYPTKGEKIMLAIITKMT 192

Query: 109 LTQVSTWFANARRRLKKENKMTWEPKNKTDDDDD 142
           LTQVSTWFANARRRLKKENKMTW P+N+  D DD
Sbjct: 193 LTQVSTWFANARRRLKKENKMTWSPRNRCGDADD 226


>gi|426382206|ref|XP_004057704.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Gorilla
           gorilla gorilla]
          Length = 447

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 1/87 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDA 143
           ANARRRLKKENKMTW PKNK  ++  A
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKA 224


>gi|56694852|gb|AAW23088.1| Irx-a, partial [Oikopleura dioica]
          Length = 204

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/99 (76%), Positives = 83/99 (83%), Gaps = 3/99 (3%)

Query: 59  YGAGYDLA--ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           YGA  D++   RRKNATREST TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 49  YGAYNDMSDGVRRKNATRESTNTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 108

Query: 117 ANARRRLKKENKMTWEPKNK-TDDDDDAIISDCDEKDKD 154
           ANARRRLKKENKMTW PKN+ TD +DD      +E +K+
Sbjct: 109 ANARRRLKKENKMTWVPKNRATDGEDDESNGLGEENEKE 147


>gi|157116233|ref|XP_001658394.1| iroquois-class homeodomain protein irx [Aedes aegypti]
 gi|108876563|gb|EAT40788.1| AAEL007502-PA [Aedes aegypti]
          Length = 540

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/78 (88%), Positives = 74/78 (94%), Gaps = 1/78 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 195 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 254

Query: 121 RRLKKENKMTWEPKNKTD 138
           RRLKKENKMTWEP+N+ +
Sbjct: 255 RRLKKENKMTWEPRNRVE 272


>gi|259013289|ref|NP_001158359.1| iroquois [Saccoglossus kowalevskii]
 gi|32307785|gb|AAP79289.1| iroquois [Saccoglossus kowalevskii]
          Length = 500

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/85 (83%), Positives = 77/85 (90%), Gaps = 3/85 (3%)

Query: 58  RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYG G D+  AARRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 130 RYG-GVDINGAARRKNATRETTSTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 188

Query: 116 FANARRRLKKENKMTWEPKNKTDDD 140
           FANARRRLKKENKMTW P+N+  DD
Sbjct: 189 FANARRRLKKENKMTWSPRNRCGDD 213


>gi|391332528|ref|XP_003740686.1| PREDICTED: uncharacterized protein LOC100902011 [Metaseiulus
           occidentalis]
          Length = 281

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 76/84 (90%), Gaps = 1/84 (1%)

Query: 60  GAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           G G++L   RRKN TR+ST+TLKAWLNEHKKNPYP+KGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 105 GGGFELQTTRRKNVTRDSTSTLKAWLNEHKKNPYPSKGEKIMLAIITKMTLTQVSTWFAN 164

Query: 119 ARRRLKKENKMTWEPKNKTDDDDD 142
           ARRRLKKENKMTWEP+NK D + D
Sbjct: 165 ARRRLKKENKMTWEPRNKCDFEGD 188


>gi|193083637|gb|ACF10239.1| iroquois B [Branchiostoma floridae]
          Length = 496

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 70/89 (78%), Positives = 77/89 (86%), Gaps = 1/89 (1%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
            ARRKNATRE+TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK
Sbjct: 142 GARRKNATRETTATLKAWLMEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 201

Query: 126 ENKMTWEPKNKTDDDDDAIISDCDEKDKD 154
           ENKMTW P+N++ D +    SD  E D+D
Sbjct: 202 ENKMTWSPRNRSGDSEGGEGSDI-EGDED 229


>gi|148679140|gb|EDL11087.1| Iroquois related homeobox 6 (Drosophila), isoform CRA_a [Mus
           musculus]
          Length = 443

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/112 (67%), Positives = 84/112 (75%), Gaps = 11/112 (9%)

Query: 58  RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYG G +L  A RRKNATREST+ LKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 139 RYG-GVELSSAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 197

Query: 116 FANARRRLKKENKMTWEPKN------KTDDDDDAIISDCDEKDKDDLMMDEE 161
           FANARRRLKKENKMTW PKN      K D  +D++   C   D  D    +E
Sbjct: 198 FANARRRLKKENKMTWAPKNKGGEERKADSGEDSL--GCLNGDTKDATASQE 247


>gi|170027824|ref|XP_001841797.1| iroquois-class homeodomain protein irx [Culex quinquefasciatus]
 gi|167862367|gb|EDS25750.1| iroquois-class homeodomain protein irx [Culex quinquefasciatus]
          Length = 512

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/78 (88%), Positives = 74/78 (94%), Gaps = 1/78 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 169 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 228

Query: 121 RRLKKENKMTWEPKNKTD 138
           RRLKKENKMTWEP+N+ +
Sbjct: 229 RRLKKENKMTWEPRNRVE 246


>gi|68448553|ref|NP_071873.2| iroquois-class homeodomain protein IRX-6 [Mus musculus]
 gi|26330452|dbj|BAC28956.1| unnamed protein product [Mus musculus]
 gi|26343675|dbj|BAC35494.1| unnamed protein product [Mus musculus]
          Length = 439

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/112 (67%), Positives = 84/112 (75%), Gaps = 11/112 (9%)

Query: 58  RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYG G +L  A RRKNATREST+ LKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 135 RYG-GVELSSAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 193

Query: 116 FANARRRLKKENKMTWEPKN------KTDDDDDAIISDCDEKDKDDLMMDEE 161
           FANARRRLKKENKMTW PKN      K D  +D++   C   D  D    +E
Sbjct: 194 FANARRRLKKENKMTWAPKNKGGEERKADSGEDSL--GCLNGDTKDATASQE 243


>gi|10443241|emb|CAC10403.1| iroquois homeobox protein 6 [Mus musculus]
 gi|120538367|gb|AAI30030.1| Iroquois related homeobox 6 (Drosophila) [Mus musculus]
          Length = 438

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/112 (67%), Positives = 84/112 (75%), Gaps = 11/112 (9%)

Query: 58  RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYG G +L  A RRKNATREST+ LKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 135 RYG-GVELSSAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 193

Query: 116 FANARRRLKKENKMTWEPKN------KTDDDDDAIISDCDEKDKDDLMMDEE 161
           FANARRRLKKENKMTW PKN      K D  +D++   C   D  D    +E
Sbjct: 194 FANARRRLKKENKMTWAPKNKGGEERKADSGEDSL--GCLNGDTKDATASQE 243


>gi|195327201|ref|XP_002030310.1| GM25364 [Drosophila sechellia]
 gi|194119253|gb|EDW41296.1| GM25364 [Drosophila sechellia]
          Length = 547

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/119 (63%), Positives = 85/119 (71%), Gaps = 21/119 (17%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 126 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 185

Query: 121 RRLKKENKMTWEPKNKTD--------------------DDDDAIISDCDEKDKDDLMMD 159
           RRLKKENKMTWEP+N+ D                    D  D+ +   D+KD+   + D
Sbjct: 186 RRLKKENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLLDAKDSGVGSTDDKDRSGRLGD 244


>gi|148679141|gb|EDL11088.1| Iroquois related homeobox 6 (Drosophila), isoform CRA_b [Mus
           musculus]
          Length = 438

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/112 (67%), Positives = 84/112 (75%), Gaps = 11/112 (9%)

Query: 58  RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYG G +L  A RRKNATREST+ LKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 135 RYG-GVELSSAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 193

Query: 116 FANARRRLKKENKMTWEPKN------KTDDDDDAIISDCDEKDKDDLMMDEE 161
           FANARRRLKKENKMTW PKN      K D  +D++   C   D  D    +E
Sbjct: 194 FANARRRLKKENKMTWAPKNKGGEERKADSGEDSL--GCLNGDTKDATASQE 243


>gi|341940842|sp|Q9ER75.2|IRX6_MOUSE RecName: Full=Iroquois-class homeodomain protein IRX-6; AltName:
           Full=Homeodomain protein IRXB3; AltName: Full=Iroquois
           homeobox protein 6
          Length = 438

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/112 (67%), Positives = 84/112 (75%), Gaps = 11/112 (9%)

Query: 58  RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYG G +L  A RRKNATREST+ LKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 135 RYG-GVELSSAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 193

Query: 116 FANARRRLKKENKMTWEPKN------KTDDDDDAIISDCDEKDKDDLMMDEE 161
           FANARRRLKKENKMTW PKN      K D  +D++   C   D  D    +E
Sbjct: 194 FANARRRLKKENKMTWAPKNKGGEERKADSGEDSL--GCLNGDTKDATASQE 243


>gi|312372586|gb|EFR20515.1| hypothetical protein AND_19965 [Anopheles darlingi]
          Length = 436

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/78 (88%), Positives = 74/78 (94%), Gaps = 1/78 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 51  GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 110

Query: 121 RRLKKENKMTWEPKNKTD 138
           RRLKKENKMTWEP+N+ +
Sbjct: 111 RRLKKENKMTWEPRNRVE 128


>gi|7576706|gb|AAF63955.1|AF165985_1 iroquois-class homeobox protein Irx5 [Mus musculus]
          Length = 441

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 110 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 169

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 170 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 209


>gi|156231014|ref|NP_001095883.1| iroquois-class homeodomain protein IRX-6 [Rattus norvegicus]
 gi|149032697|gb|EDL87567.1| similar to iroquois homeobox protein 6 (predicted) [Rattus
           norvegicus]
          Length = 443

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/113 (67%), Positives = 85/113 (75%), Gaps = 12/113 (10%)

Query: 58  RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYG G +L  A RRKNATREST+ LKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 135 RYG-GVELSSAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 193

Query: 116 FANARRRLKKENKMTWEPKNKTDDD-------DDAIISDCDEKDKDDLMMDEE 161
           FANARRRLKKENKMTW PKNK  ++       +DA+   C   D  D    +E
Sbjct: 194 FANARRRLKKENKMTWVPKNKGGEERKADGGGEDAL--GCLNGDTKDATASQE 244


>gi|193083635|gb|ACF10238.1| iroquois B [Branchiostoma lanceolatum]
          Length = 494

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 70/89 (78%), Positives = 77/89 (86%), Gaps = 1/89 (1%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
            ARRKNATRE+TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK
Sbjct: 142 GARRKNATRETTATLKAWLLEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 201

Query: 126 ENKMTWEPKNKTDDDDDAIISDCDEKDKD 154
           ENKMTW P+N++ D +    SD D  D+D
Sbjct: 202 ENKMTWSPRNRSGDSEGGEGSDID-GDED 229


>gi|351709280|gb|EHB12199.1| Iroquois-class homeodomain protein IRX-6 [Heterocephalus glaber]
          Length = 460

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 71/85 (83%), Positives = 77/85 (90%), Gaps = 3/85 (3%)

Query: 58  RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYG G +L  A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 149 RYG-GVELSSAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 207

Query: 116 FANARRRLKKENKMTWEPKNKTDDD 140
           FANARRRLKKENKMTW PKNK  ++
Sbjct: 208 FANARRRLKKENKMTWAPKNKVGEE 232


>gi|354471679|ref|XP_003498068.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Cricetulus
           griseus]
          Length = 517

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 76/111 (68%), Positives = 85/111 (76%), Gaps = 8/111 (7%)

Query: 58  RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYG G +L  A RRKNATREST+ LKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 122 RYG-GVELSGAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 180

Query: 116 FANARRRLKKENKMTWEPKNKTDDD--DDAIISD---CDEKDKDDLMMDEE 161
           FANARRRLKKENKMTW PKNK  ++   D+   D   C  +D  D    +E
Sbjct: 181 FANARRRLKKENKMTWAPKNKGGEERKADSAGEDSLGCLTRDTKDATASQE 231


>gi|121484129|gb|ABM54407.1| IRX6 [Pan paniscus]
          Length = 225

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 1/87 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 123 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 182

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDA 143
           ANARRRLKKENKMTW PKNK  ++  A
Sbjct: 183 ANARRRLKKENKMTWAPKNKGGEERKA 209


>gi|195446597|ref|XP_002070839.1| GK25452 [Drosophila willistoni]
 gi|194166924|gb|EDW81825.1| GK25452 [Drosophila willistoni]
          Length = 620

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 69/76 (90%), Positives = 73/76 (96%), Gaps = 1/76 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 205 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 264

Query: 121 RRLKKENKMTWEPKNK 136
           RRLKKENKMTWEP+N+
Sbjct: 265 RRLKKENKMTWEPRNR 280


>gi|301752876|ref|XP_002912328.1| PREDICTED: iroquois-class homeodomain protein IRX-6-like
           [Ailuropoda melanoleuca]
          Length = 496

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 71/88 (80%), Positives = 78/88 (88%), Gaps = 3/88 (3%)

Query: 58  RYGAGYDLAA--RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYGA  +L+   RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 138 RYGA-VELSGTGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 196

Query: 116 FANARRRLKKENKMTWEPKNKTDDDDDA 143
           FANARRRLKKENKMTW PKNK  ++  A
Sbjct: 197 FANARRRLKKENKMTWAPKNKGGEERKA 224


>gi|432908322|ref|XP_004077810.1| PREDICTED: iroquois-class homeodomain protein irx-4-like [Oryzias
           latipes]
          Length = 470

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/109 (67%), Positives = 83/109 (76%), Gaps = 8/109 (7%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG+  D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGS-MDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193

Query: 118 NARRRLKKENKMTWEPKNKT-------DDDDDAIISDCDEKDKDDLMMD 159
           NARRRLKKENKMTW P+NK        DD+D +       ++ DD  MD
Sbjct: 194 NARRRLKKENKMTWPPRNKGSEEKRYDDDEDGSQEEQIKSENNDDEAMD 242


>gi|9055250|ref|NP_061296.1| iroquois-class homeodomain protein IRX-5 [Mus musculus]
 gi|20177968|sp|Q9JKQ4.1|IRX5_MOUSE RecName: Full=Iroquois-class homeodomain protein IRX-5; AltName:
           Full=Homeodomain protein IRXB2; AltName: Full=Iroquois
           homeobox protein 5
 gi|7229543|gb|AAF42871.1|AF230074_1 iroquois homeobox protein 5 IRX-5 [Mus musculus]
 gi|12836155|dbj|BAB23528.1| unnamed protein product [Mus musculus]
 gi|34785234|gb|AAH56994.1| Iroquois related homeobox 5 (Drosophila) [Mus musculus]
 gi|37574003|gb|AAH51959.2| Iroquois related homeobox 5 (Drosophila) [Mus musculus]
          Length = 484

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 110 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 169

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 170 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 209


>gi|344235911|gb|EGV92014.1| Iroquois-class homeodomain protein IRX-6 [Cricetulus griseus]
          Length = 458

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 76/111 (68%), Positives = 85/111 (76%), Gaps = 8/111 (7%)

Query: 58  RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYG G +L  A RRKNATREST+ LKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 120 RYG-GVELSGAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 178

Query: 116 FANARRRLKKENKMTWEPKNKTDDD--DDAIISD---CDEKDKDDLMMDEE 161
           FANARRRLKKENKMTW PKNK  ++   D+   D   C  +D  D    +E
Sbjct: 179 FANARRRLKKENKMTWAPKNKGGEERKADSAGEDSLGCLTRDTKDATASQE 229


>gi|307177870|gb|EFN66830.1| Homeobox protein araucan [Camponotus floridanus]
          Length = 416

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 90/120 (75%), Gaps = 12/120 (10%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 2   GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 61

Query: 121 RRLKKENKMTWEPKNKTDDDDDAIIS------DCDEKDKDD-----LMMDEEKMKQHHRM 169
           RRLKKENKMTWEP+N+ +D+D+            DEKD+ D         E+  +  HRM
Sbjct: 62  RRLKKENKMTWEPRNRVEDEDNNNEDDDSGRKSVDEKDRLDSKDSGTGSSEDGERPAHRM 121


>gi|426246881|ref|XP_004017216.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Ovis aries]
          Length = 502

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 69/85 (81%), Positives = 76/85 (89%), Gaps = 1/85 (1%)

Query: 56  AVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           A+ YG+  D   RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 120 AIWYGS-MDSGTRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 178

Query: 116 FANARRRLKKENKMTWEPKNKTDDD 140
           FANARRRLKKENKMTW P+NK  D+
Sbjct: 179 FANARRRLKKENKMTWPPRNKCADE 203


>gi|405965487|gb|EKC30856.1| Homeobox protein caupolican [Crassostrea gigas]
          Length = 485

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 3/87 (3%)

Query: 54  LTAVRYGAGY---DLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLT 110
           ++   YG GY   DL ARRKNATRE+T TLKAWL EH+KNPYPTKGEKIMLAIITKMTLT
Sbjct: 127 MSVYPYGPGYGGIDLNARRKNATRETTNTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLT 186

Query: 111 QVSTWFANARRRLKKENKMTWEPKNKT 137
           QVSTWFANARRRLKKENKMTW P+N++
Sbjct: 187 QVSTWFANARRRLKKENKMTWSPRNRS 213


>gi|321467888|gb|EFX78876.1| hypothetical protein DAPPUDRAFT_28488 [Daphnia pulex]
          Length = 72

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 70/72 (97%), Positives = 71/72 (98%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           YGA YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 1   YGASYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 60

Query: 119 ARRRLKKENKMT 130
           ARRRLKKENKMT
Sbjct: 61  ARRRLKKENKMT 72


>gi|440910029|gb|ELR59863.1| Iroquois-class homeodomain protein IRX-6, partial [Bos grunniens
           mutus]
          Length = 449

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 82/110 (74%), Gaps = 6/110 (5%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNK-----TDDDDDAIISDCDEKDKDDLMMDEE 161
           ANARRRLKKENKMTW PKNK      ++     +  C   D  D+   +E
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKEEGGAEELLGCLNGDTKDVTAGQE 247


>gi|126296109|ref|XP_001364094.1| PREDICTED: iroquois-class homeodomain protein IRX-5-like
           [Monodelphis domestica]
          Length = 471

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|390477707|ref|XP_002807786.2| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-5 [Callithrix jacchus]
          Length = 482

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|395839430|ref|XP_003792592.1| PREDICTED: iroquois-class homeodomain protein IRX-5 [Otolemur
           garnettii]
          Length = 483

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|149699543|ref|XP_001493282.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Equus
           caballus]
          Length = 470

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 70/84 (83%), Positives = 75/84 (89%), Gaps = 1/84 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNKTDDD 140
           ANARRRLKKENKMTW PKNK  ++
Sbjct: 198 ANARRRLKKENKMTWAPKNKGAEE 221


>gi|122892632|gb|ABM67381.1| IRX6 [Hylobates klossii]
          Length = 430

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 74/111 (66%), Positives = 86/111 (77%), Gaps = 8/111 (7%)

Query: 58  RYGAGYDLAA--RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYGA  +L+   RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 123 RYGA-VELSGTGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 181

Query: 116 FANARRRLKKENKMTWEPKNKTDDDDDAIISD-----CDEKDKDDLMMDEE 161
           FANARRRLKKENKMTW PKNK  ++  A   +     C   D  ++ + +E
Sbjct: 182 FANARRRLKKENKMTWAPKNKGGEERKAEGGEEDSLGCLNADTKEVTVSQE 232


>gi|390460155|ref|XP_003732428.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-4 [Callithrix jacchus]
          Length = 520

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/83 (83%), Positives = 74/83 (89%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 136 RYGT-MDSGTRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 194

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 195 NARRRLKKENKMTWPPRNKCADE 217


>gi|321467889|gb|EFX78877.1| hypothetical protein DAPPUDRAFT_28797 [Daphnia pulex]
          Length = 83

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 73/83 (87%), Positives = 77/83 (92%), Gaps = 2/83 (2%)

Query: 59  YGA-GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           YG  G DL  +RRKNATRE+TATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 1   YGRYGMDLNGSRRKNATRETTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 60

Query: 117 ANARRRLKKENKMTWEPKNKTDD 139
           ANARRRLKKENKMTWEPKN+ DD
Sbjct: 61  ANARRRLKKENKMTWEPKNRNDD 83


>gi|300795028|ref|NP_001179926.1| iroquois-class homeodomain protein IRX-6 [Bos taurus]
 gi|296478072|tpg|DAA20187.1| TPA: iroquois homeobox protein 6-like [Bos taurus]
          Length = 445

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 82/110 (74%), Gaps = 6/110 (5%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197

Query: 117 ANARRRLKKENKMTWEPKNK-----TDDDDDAIISDCDEKDKDDLMMDEE 161
           ANARRRLKKENKMTW PKNK      ++     +  C   D  D+   +E
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKEEGGAEELLGCLNGDTKDVTAGQE 247


>gi|14701806|gb|AAK72232.1|AF340184_1 iroquois 3 homeobox protein [Danio rerio]
          Length = 454

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 83/97 (85%), Gaps = 1/97 (1%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 107 SRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 166

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKM 163
           NKMTW P+++TD++ +   SD  E D  D   DEE++
Sbjct: 167 NKMTWTPRSRTDEEGNVYNSD-HEGDDGDKREDEEEI 202


>gi|62205096|gb|AAH92694.1| Irx3a protein [Danio rerio]
 gi|182890042|gb|AAI65201.1| Irx3a protein [Danio rerio]
          Length = 454

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 83/97 (85%), Gaps = 1/97 (1%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 107 SRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 166

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKM 163
           NKMTW P+++TD++ +   SD  E D  D   DEE++
Sbjct: 167 NKMTWTPRSRTDEEGNVYNSD-HEGDDGDKREDEEEI 202


>gi|395505960|ref|XP_003757304.1| PREDICTED: iroquois-class homeodomain protein IRX-5 [Sarcophilus
           harrisii]
          Length = 470

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKSEDK 210


>gi|431914130|gb|ELK15389.1| Iroquois-class homeodomain protein IRX-6 [Pteropus alecto]
          Length = 513

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 71/88 (80%), Positives = 78/88 (88%), Gaps = 3/88 (3%)

Query: 58  RYGAGYDLAA--RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYGA  +L+   RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 138 RYGA-VELSGPGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 196

Query: 116 FANARRRLKKENKMTWEPKNKTDDDDDA 143
           FANARRRLKKENKMTW PKNK  ++  A
Sbjct: 197 FANARRRLKKENKMTWAPKNKGGEERKA 224


>gi|403292602|ref|XP_003937324.1| PREDICTED: iroquois-class homeodomain protein IRX-5 [Saimiri
           boliviensis boliviensis]
          Length = 482

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|149032695|gb|EDL87565.1| iroquois homeobox protein 5 [Rattus norvegicus]
          Length = 484

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 110 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 169

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 170 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 209


>gi|297698746|ref|XP_002826468.1| PREDICTED: iroquois-class homeodomain protein IRX-5 [Pongo abelii]
          Length = 483

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|348583649|ref|XP_003477585.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-5-like [Cavia porcellus]
          Length = 483

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|281346621|gb|EFB22205.1| hypothetical protein PANDA_000008 [Ailuropoda melanoleuca]
          Length = 430

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 71/88 (80%), Positives = 78/88 (88%), Gaps = 3/88 (3%)

Query: 58  RYGAGYDLAA--RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYGA  +L+   RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 123 RYGA-VELSGTGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 181

Query: 116 FANARRRLKKENKMTWEPKNKTDDDDDA 143
           FANARRRLKKENKMTW PKNK  ++  A
Sbjct: 182 FANARRRLKKENKMTWAPKNKGGEERKA 209


>gi|426382196|ref|XP_004057699.1| PREDICTED: iroquois-class homeodomain protein IRX-5 [Gorilla
           gorilla gorilla]
          Length = 483

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|28971637|dbj|BAC65246.1| iroquois homeobox protein iro3 [Oryzias latipes]
          Length = 214

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 84/97 (86%), Gaps = 1/97 (1%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 24  SRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 83

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKM 163
           NKMTW P+N+TD++ +   SD  E ++ D   DEE++
Sbjct: 84  NKMTWAPRNRTDEEGNVYTSDH-EGEEGDKREDEEEI 119


>gi|402908398|ref|XP_003916929.1| PREDICTED: iroquois-class homeodomain protein IRX-5 [Papio anubis]
          Length = 483

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|300795087|ref|NP_001179673.1| iroquois-class homeodomain protein IRX-5 [Bos taurus]
 gi|296478071|tpg|DAA20186.1| TPA: iroquois homeobox protein 5-like [Bos taurus]
          Length = 483

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|114662540|ref|XP_510970.2| PREDICTED: iroquois-class homeodomain protein IRX-5 isoform 2 [Pan
           troglodytes]
          Length = 483

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|123911017|sp|Q4LDQ3.1|IRX5_XENTR RecName: Full=Iroquois-class homeodomain protein irx-5; AltName:
           Full=Iroquois homeobox protein 5
 gi|68303616|gb|AAY89592.1| Irx5 [Xenopus (Silurana) tropicalis]
          Length = 482

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 73/103 (70%), Positives = 86/103 (83%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 107 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 166

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQ 165
           LKKENKMTW P+N+++D++D    D ++ ++DD    EEK  Q
Sbjct: 167 LKKENKMTWTPRNRSEDEEDDENIDLEKNEEDDPRKLEEKGDQ 209


>gi|109128519|ref|XP_001086980.1| PREDICTED: iroquois-class homeodomain protein IRX-5 isoform 2
           [Macaca mulatta]
          Length = 483

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|139394646|ref|NP_005844.4| iroquois-class homeodomain protein IRX-5 isoform 1 [Homo sapiens]
 gi|143811406|sp|P78411.3|IRX5_HUMAN RecName: Full=Iroquois-class homeodomain protein IRX-5; AltName:
           Full=Homeodomain protein IRX-2A; AltName:
           Full=Homeodomain protein IRXB2; AltName: Full=Iroquois
           homeobox protein 5
          Length = 483

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|11061685|emb|CAC14462.1| iroquois homeobox protein 5 [Mus musculus]
          Length = 410

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 37  YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 96

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 97  LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 136


>gi|332227844|ref|XP_003263103.1| PREDICTED: iroquois-class homeodomain protein IRX-5 [Nomascus
           leucogenys]
          Length = 483

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|311257251|ref|XP_003127029.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-3-like [Sus scrofa]
          Length = 502

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/133 (56%), Positives = 90/133 (67%), Gaps = 6/133 (4%)

Query: 14  ELQLFTQVPIQVNISSTKVPALQSRRQLCGIDKQVIQVSNLTAVRYGAGYDLAARRKNAT 73
           EL  F Q+  Q  +  +  P +Q      G              ++G      +R KNAT
Sbjct: 82  ELPFFPQLGTQYELKDS--PGVQHPAAAAGFPHPHPAFYPYGQYQFGD----PSRPKNAT 135

Query: 74  RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           REST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW P
Sbjct: 136 RESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAP 195

Query: 134 KNKTDDDDDAIIS 146
           +++TD++ +A  S
Sbjct: 196 RSRTDEEGNAYGS 208


>gi|124001909|gb|ABM87906.1| IRX6 [Papio hamadryas]
          Length = 123

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/93 (77%), Positives = 78/93 (83%), Gaps = 1/93 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 21  RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 80

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISDCD 149
           ANARRRLKKENKMTW PKNK  ++  A   + D
Sbjct: 81  ANARRRLKKENKMTWAPKNKGGEERKAXXGEED 113


>gi|24119199|ref|NP_571342.1| iroquois homeobox protein 3a [Danio rerio]
 gi|6434896|gb|AAF08360.1|AF124095_1 iroquois homeobox protein Ziro3 [Danio rerio]
          Length = 420

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 83/97 (85%), Gaps = 1/97 (1%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 107 SRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 166

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKM 163
           NKMTW P+++TD++ +   SD  E D  D   DEE++
Sbjct: 167 NKMTWTPRSRTDEEGNVYNSD-HEGDDGDKREDEEEI 202


>gi|356582257|ref|NP_001239126.1| iroquois-class homeodomain protein IRX-5 isoform 2 [Homo sapiens]
 gi|33356607|gb|AAQ16550.1| homeodomain protein IRXB2 [Homo sapiens]
 gi|33356609|gb|AAQ16551.1| homeodomain protein IRXB2 [Homo sapiens]
          Length = 482

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|48976089|ref|NP_001001744.1| iroquois-class homeodomain protein IRX-4 [Gallus gallus]
 gi|25453057|sp|Q9YGS0.1|IRX4_CHICK RecName: Full=Iroquois-class homeodomain protein IRX-4; AltName:
           Full=Iroquois homeobox protein 4
 gi|4322577|gb|AAD16100.1| iroquois-related homeobox transcription factor [Gallus gallus]
          Length = 485

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/83 (83%), Positives = 74/83 (89%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYGA  D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGA-MDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 194 NARRRLKKENKMTWPPRNKCSDE 216


>gi|385258639|gb|AFI55141.1| irx3a2 [Cyprinus carpio]
          Length = 447

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/95 (72%), Positives = 82/95 (86%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 107 SRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 166

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEE 161
           NKMTW P+++TD++ +   SD + +D D    +EE
Sbjct: 167 NKMTWAPRSRTDEEGNVYNSDHEGEDGDKREDEEE 201


>gi|397480685|ref|XP_003811606.1| PREDICTED: iroquois-class homeodomain protein IRX-5 [Pan paniscus]
          Length = 443

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|284813585|ref|NP_001165398.1| iroquois-class homeodomain protein irx-5 [Xenopus (Silurana)
           tropicalis]
          Length = 486

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/103 (70%), Positives = 86/103 (83%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQ 165
           LKKENKMTW P+N+++D++D    D ++ ++DD    EEK  Q
Sbjct: 171 LKKENKMTWTPRNRSEDEEDDENIDLEKNEEDDPRKLEEKGDQ 213


>gi|385258637|gb|AFI55140.1| irx3a1 [Cyprinus carpio]
          Length = 421

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/95 (72%), Positives = 82/95 (86%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 107 SRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 166

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEE 161
           NKMTW P+++TD++ +   SD + +D D    +EE
Sbjct: 167 NKMTWAPRSRTDEEGNVYNSDHEGEDGDKREDEEE 201


>gi|195378775|ref|XP_002048157.1| GJ11496 [Drosophila virilis]
 gi|194155315|gb|EDW70499.1| GJ11496 [Drosophila virilis]
          Length = 575

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/76 (90%), Positives = 73/76 (96%), Gaps = 1/76 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 278 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 337

Query: 121 RRLKKENKMTWEPKNK 136
           RRLKKENKMTWEP+N+
Sbjct: 338 RRLKKENKMTWEPRNR 353


>gi|444725597|gb|ELW66158.1| Iroquois-class homeodomain protein IRX-5 [Tupaia chinensis]
          Length = 408

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|417410982|gb|JAA51953.1| Putative transcription factor meis1, partial [Desmodus rotundus]
          Length = 472

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/81 (81%), Positives = 76/81 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 104 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 163

Query: 127 NKMTWEPKNKTDDDDDAIISD 147
           NKMTW P+++TD++ +A  S+
Sbjct: 164 NKMTWAPRSRTDEEGNAYGSE 184


>gi|344289365|ref|XP_003416414.1| PREDICTED: iroquois-class homeodomain protein IRX-5-like [Loxodonta
           africana]
          Length = 369

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210


>gi|73949844|ref|XP_851198.1| PREDICTED: iroquois-class homeodomain protein IRX-5 isoform 2
           [Canis lupus familiaris]
          Length = 483

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 84/100 (84%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEGK 210


>gi|124054398|gb|ABM89425.1| IRX6 [Pongo pygmaeus]
          Length = 307

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/86 (81%), Positives = 76/86 (88%), Gaps = 1/86 (1%)

Query: 59  YGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           YGA     A+RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 1   YGAVELSGASRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 60

Query: 118 NARRRLKKENKMTWEPKNKTDDDDDA 143
           NARRRLKKENKMTW PKNK  ++  A
Sbjct: 61  NARRRLKKENKMTWAPKNKGGEERKA 86


>gi|296231089|ref|XP_002760997.1| PREDICTED: iroquois-class homeodomain protein IRX-3 [Callithrix
           jacchus]
          Length = 501

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 189 NKMTWAPRSRTDEEGNAYGS 208


>gi|403292640|ref|XP_003937343.1| PREDICTED: iroquois-class homeodomain protein IRX-3, partial
           [Saimiri boliviensis boliviensis]
          Length = 440

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 67  SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 127 NKMTWAPRSRTDEEGNAYGS 146


>gi|195589890|ref|XP_002084682.1| GD14396 [Drosophila simulans]
 gi|194196691|gb|EDX10267.1| GD14396 [Drosophila simulans]
          Length = 641

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 69/76 (90%), Positives = 73/76 (96%), Gaps = 1/76 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 220 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 279

Query: 121 RRLKKENKMTWEPKNK 136
           RRLKKENKMTWEP+N+
Sbjct: 280 RRLKKENKMTWEPRNR 295


>gi|348512342|ref|XP_003443702.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like
           [Oreochromis niloticus]
          Length = 473

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/92 (77%), Positives = 77/92 (83%), Gaps = 7/92 (7%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG+  D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGS-MDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193

Query: 118 NARRRLKKENKMTWEPKNKT------DDDDDA 143
           NARRRLKKENKMTW P+NK       DDD+D 
Sbjct: 194 NARRRLKKENKMTWPPRNKGSEEKRYDDDEDG 225


>gi|354506372|ref|XP_003515237.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Cricetulus
           griseus]
          Length = 486

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 109 RYGT-VDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 167

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 168 NARRRLKKENKMTWPPRNKCADE 190


>gi|348541735|ref|XP_003458342.1| PREDICTED: iroquois-class homeodomain protein IRX-5-like
           [Oreochromis niloticus]
          Length = 390

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/166 (50%), Positives = 106/166 (63%), Gaps = 10/166 (6%)

Query: 3   YTSPETK-TLRPELQLFTQVPIQVNISSTKVPALQSRRQLCG-IDKQVIQVSNLTAVRYG 60
           Y+ P T     P+L    +      +SS   P       + G +D        L    YG
Sbjct: 46  YSGPATSPGFGPQLPYGGEPRAAAALSSYVSPGYDPSSGISGSLDYHPFGA--LGPYPYG 103

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
                AA RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 104 D----AAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 159

Query: 121 RRLKKENKMTWEPKNKTDDDDDAIISDCD--EKDKDDLMMDEEKMK 164
           RRLKKENKMTW P+N+++D+++    D +  E+D++ L    E+M+
Sbjct: 160 RRLKKENKMTWTPRNRSEDEEEEDNIDLERNEEDEEPLKASGEEME 205


>gi|24663392|ref|NP_524047.2| mirror, isoform A [Drosophila melanogaster]
 gi|24663396|ref|NP_729818.1| mirror, isoform B [Drosophila melanogaster]
 gi|7294553|gb|AAF49894.1| mirror, isoform A [Drosophila melanogaster]
 gi|23093572|gb|AAN11850.1| mirror, isoform B [Drosophila melanogaster]
          Length = 641

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 69/76 (90%), Positives = 73/76 (96%), Gaps = 1/76 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 220 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 279

Query: 121 RRLKKENKMTWEPKNK 136
           RRLKKENKMTWEP+N+
Sbjct: 280 RRLKKENKMTWEPRNR 295


>gi|327276423|ref|XP_003222969.1| PREDICTED: iroquois-class homeodomain protein IRX-6-like [Anolis
           carolinensis]
          Length = 456

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 86/110 (78%), Gaps = 4/110 (3%)

Query: 58  RYG-AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG   +  +ARRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 62  RYGTVDFSSSARRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 121

Query: 117 ANARRRLKKENKMTWEPKNKTDDD--DDAIISDCDEKDKDDLMMDEEKMK 164
           ANARRRLKKENKMTW PKNK  ++  +D     C E +K+  + D E M+
Sbjct: 122 ANARRRLKKENKMTWSPKNKAGEERQEDTDPKSCKE-EKELRLSDLEDME 170


>gi|194747619|ref|XP_001956249.1| GF24692 [Drosophila ananassae]
 gi|190623531|gb|EDV39055.1| GF24692 [Drosophila ananassae]
          Length = 661

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 69/76 (90%), Positives = 73/76 (96%), Gaps = 1/76 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 231 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 290

Query: 121 RRLKKENKMTWEPKNK 136
           RRLKKENKMTWEP+N+
Sbjct: 291 RRLKKENKMTWEPRNR 306


>gi|94732881|emb|CAK05486.1| novel iroquois homeobox protein family [Danio rerio]
          Length = 235

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/84 (80%), Positives = 74/84 (88%), Gaps = 1/84 (1%)

Query: 58  RYG-AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG   ++ + RRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 147 RYGTVDFNGSTRRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 206

Query: 117 ANARRRLKKENKMTWEPKNKTDDD 140
           ANARRRLKKENKMTW PKNK  DD
Sbjct: 207 ANARRRLKKENKMTWSPKNKAGDD 230


>gi|120975024|gb|ABM46807.1| IRX6 [Gorilla gorilla]
          Length = 306

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/86 (81%), Positives = 75/86 (87%), Gaps = 1/86 (1%)

Query: 59  YGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           YGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 1   YGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 60

Query: 118 NARRRLKKENKMTWEPKNKTDDDDDA 143
           NARRRLKKENKMTW PKNK  ++  A
Sbjct: 61  NARRRLKKENKMTWAPKNKGGEERKA 86


>gi|444732393|gb|ELW72691.1| Iroquois-class homeodomain protein IRX-4 [Tupaia chinensis]
          Length = 509

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 134 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 192

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 193 NARRRLKKENKMTWPPRNKCADE 215


>gi|2071997|gb|AAB53640.1| mirror [Drosophila melanogaster]
 gi|3243091|gb|AAC23943.1| homeoprotein Sail [Drosophila melanogaster]
          Length = 641

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 69/76 (90%), Positives = 73/76 (96%), Gaps = 1/76 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 220 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 279

Query: 121 RRLKKENKMTWEPKNK 136
           RRLKKENKMTWEP+N+
Sbjct: 280 RRLKKENKMTWEPRNR 295


>gi|149032687|gb|EDL87557.1| Iroquois related homeobox 3 (Drosophila) (predicted), isoform CRA_a
           [Rattus norvegicus]
          Length = 507

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 132 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 191

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 192 NKMTWAPRSRTDEEGNAYGS 211


>gi|125978763|ref|XP_001353414.1| GA10430 [Drosophila pseudoobscura pseudoobscura]
 gi|195160685|ref|XP_002021205.1| GL25205 [Drosophila persimilis]
 gi|54642172|gb|EAL30921.1| GA10430 [Drosophila pseudoobscura pseudoobscura]
 gi|194118318|gb|EDW40361.1| GL25205 [Drosophila persimilis]
          Length = 639

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 78/123 (63%), Positives = 90/123 (73%), Gaps = 25/123 (20%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 217 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 276

Query: 121 RRLKKENKMTWEPKNK---------------TDDDD-----DAIISDCDEKDKD----DL 156
           RRLKKENKMTWEP+N+               T+++D     D+ +   D+KD+     D+
Sbjct: 277 RRLKKENKMTWEPRNRVDDDDANIDDDDDKNTEENDLLDAKDSGVGSTDDKDRSGRLGDM 336

Query: 157 MMD 159
           M D
Sbjct: 337 MAD 339


>gi|118343846|ref|NP_001071747.1| transcription factor protein [Ciona intestinalis]
 gi|70570009|dbj|BAE06520.1| transcription factor protein [Ciona intestinalis]
          Length = 570

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/88 (77%), Positives = 73/88 (82%), Gaps = 7/88 (7%)

Query: 56  AVRYGAGYDLA-------ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMT 108
           A  YG  Y          ARRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMT
Sbjct: 79  AAHYGGCYGYGPMGLSDGARRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMT 138

Query: 109 LTQVSTWFANARRRLKKENKMTWEPKNK 136
           LTQVSTWFANARRRLKKENKMTW P+N+
Sbjct: 139 LTQVSTWFANARRRLKKENKMTWSPRNR 166


>gi|395735619|ref|XP_002815444.2| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-4 [Pongo abelii]
          Length = 541

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/98 (70%), Positives = 77/98 (78%), Gaps = 1/98 (1%)

Query: 43  GIDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLA 102
           GI + +  +       YG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLA
Sbjct: 147 GIGRDLSGLGRSPGSLYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLA 205

Query: 103 IITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDD 140
           IITKMTLTQVSTWFANARRRLKKENKMTW P+NK  D+
Sbjct: 206 IITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADE 243


>gi|157279901|ref|NP_001098466.1| iroquois-class homeodomain protein IRX-3 [Bos taurus]
 gi|124829016|gb|AAI33454.1| IRX3 protein [Bos taurus]
 gi|296478007|tpg|DAA20122.1| TPA: iroquois homeobox 3 [Bos taurus]
          Length = 502

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 189 NKMTWAPRSRTDEEGNAYGS 208


>gi|345316136|ref|XP_001515380.2| PREDICTED: hypothetical protein LOC100084976 [Ornithorhynchus
           anatinus]
          Length = 407

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 3/87 (3%)

Query: 57  VRYGAG---YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           +R G G   +  +ARRKNATRE+TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 83  LRGGYGSVDFSGSARRKNATRETTATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVS 142

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDD 140
           TWFANARRRLKKENKMTW PK+K  D+
Sbjct: 143 TWFANARRRLKKENKMTWAPKSKAGDE 169


>gi|344289367|ref|XP_003416415.1| PREDICTED: iroquois-class homeodomain protein IRX-3-like [Loxodonta
           africana]
          Length = 507

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 189 NKMTWAPRSRTDEEGNAYGS 208


>gi|301619795|ref|XP_002939273.1| PREDICTED: iroquois-class homeodomain protein IRX-6-like [Xenopus
           (Silurana) tropicalis]
          Length = 540

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/102 (69%), Positives = 82/102 (80%), Gaps = 6/102 (5%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           R+GA     ++RRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 134 RFGAVDISCSSRRKNATRENTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 193

Query: 117 ANARRRLKKENKMTWEPKNKT-----DDDDDAIISDCDEKDK 153
           ANARRRLKKENKMTW PKNK      D+  +   S C+++DK
Sbjct: 194 ANARRRLKKENKMTWSPKNKAMDEKKDEKQEDYNSGCEDQDK 235


>gi|442632003|ref|NP_001261778.1| mirror, isoform C [Drosophila melanogaster]
 gi|440215710|gb|AGB94471.1| mirror, isoform C [Drosophila melanogaster]
          Length = 682

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 69/76 (90%), Positives = 73/76 (96%), Gaps = 1/76 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 220 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 279

Query: 121 RRLKKENKMTWEPKNK 136
           RRLKKENKMTWEP+N+
Sbjct: 280 RRLKKENKMTWEPRNR 295


>gi|351709282|gb|EHB12201.1| Iroquois-class homeodomain protein irx-3 [Heterocephalus glaber]
          Length = 433

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 127 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 186

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 187 NKMTWAPRSRTDEEGNAYGS 206


>gi|194869994|ref|XP_001972564.1| GG15588 [Drosophila erecta]
 gi|190654347|gb|EDV51590.1| GG15588 [Drosophila erecta]
          Length = 641

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 69/76 (90%), Positives = 73/76 (96%), Gaps = 1/76 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 220 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 279

Query: 121 RRLKKENKMTWEPKNK 136
           RRLKKENKMTWEP+N+
Sbjct: 280 RRLKKENKMTWEPRNR 295


>gi|351709281|gb|EHB12200.1| Iroquois-class homeodomain protein IRX-5 [Heterocephalus glaber]
          Length = 359

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 120 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 179

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 180 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 219


>gi|1899220|gb|AAB50002.1| iroquois-class homeodomain protein IRX-2a [Homo sapiens]
          Length = 417

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 45  YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 104

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 105 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 144


>gi|147898590|ref|NP_001090204.1| iroquois-class homeodomain protein irx-4-A [Xenopus laevis]
 gi|82108525|sp|Q90XW6.1|IRX4A_XENLA RecName: Full=Iroquois-class homeodomain protein irx-4-A; AltName:
           Full=Iroquois homeobox protein 4-A
 gi|15383983|gb|AAK96065.1|AF338157_1 iroquois-4 homeobox transcription factor [Xenopus laevis]
          Length = 496

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 75/83 (90%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D ++RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGT-MDGSSRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 194 NARRRLKKENKMTWPPRNKCSDE 216


>gi|157823705|ref|NP_001100800.1| iroquois-class homeodomain protein IRX-4 [Rattus norvegicus]
 gi|149032790|gb|EDL87645.1| Iroquois related homeobox 4 (Drosophila) (predicted) [Rattus
           norvegicus]
          Length = 515

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 137 RYGT-VDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 195

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 196 NARRRLKKENKMTWPPRNKCADE 218


>gi|311274151|ref|XP_003134213.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Sus scrofa]
          Length = 515

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 137 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 195

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 196 NARRRLKKENKMTWPPRNKCADE 218


>gi|9256547|ref|NP_061373.1| iroquois-class homeodomain protein IRX-4 [Mus musculus]
 gi|20177969|sp|Q9QY61.1|IRX4_MOUSE RecName: Full=Iroquois-class homeodomain protein IRX-4; AltName:
           Full=Homeodomain protein IRXA3; AltName: Full=Iroquois
           homeobox protein 4
 gi|6689880|gb|AAF23886.1|AF124732_1 iroquois homeobox protein 4 [Mus musculus]
 gi|117558649|gb|AAI26943.1| Iroquois related homeobox 4 (Drosophila) [Mus musculus]
 gi|148705098|gb|EDL37045.1| Iroquois related homeobox 4 (Drosophila) [Mus musculus]
          Length = 515

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 137 RYGT-VDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 195

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 196 NARRRLKKENKMTWPPRNKCADE 218


>gi|344258358|gb|EGW14462.1| Iroquois-class homeodomain protein IRX-4 [Cricetulus griseus]
          Length = 431

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 54  RYGT-VDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 112

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 113 NARRRLKKENKMTWPPRNKCADE 135


>gi|195493902|ref|XP_002094612.1| GE21915 [Drosophila yakuba]
 gi|194180713|gb|EDW94324.1| GE21915 [Drosophila yakuba]
          Length = 642

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 69/76 (90%), Positives = 73/76 (96%), Gaps = 1/76 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 221 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 280

Query: 121 RRLKKENKMTWEPKNK 136
           RRLKKENKMTWEP+N+
Sbjct: 281 RRLKKENKMTWEPRNR 296


>gi|55741685|ref|NP_032419.2| iroquois-class homeodomain protein IRX-3 isoform 2 [Mus musculus]
 gi|262527548|sp|P81067.2|IRX3_MOUSE RecName: Full=Iroquois-class homeodomain protein IRX-3; AltName:
           Full=Homeodomain protein IRXB1; AltName: Full=Iroquois
           homeobox protein 3
 gi|55250076|gb|AAH85500.1| Iroquois related homeobox 3 (Drosophila) [Mus musculus]
 gi|148679134|gb|EDL11081.1| Iroquois related homeobox 3 (Drosophila) [Mus musculus]
          Length = 507

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 74/77 (96%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 132 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 191

Query: 127 NKMTWEPKNKTDDDDDA 143
           NKMTW P+++TD++ +A
Sbjct: 192 NKMTWAPRSRTDEEGNA 208


>gi|383860303|ref|XP_003705630.1| PREDICTED: uncharacterized protein LOC100877027 [Megachile
           rotundata]
          Length = 685

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 70/78 (89%), Positives = 74/78 (94%), Gaps = 1/78 (1%)

Query: 60  GAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           G G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 280 GYGMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 339

Query: 119 ARRRLKKENKMTWEPKNK 136
           ARRRLKKENKMTWEP+N+
Sbjct: 340 ARRRLKKENKMTWEPRNR 357


>gi|71795658|ref|NP_001025215.1| iroquois-class homeodomain protein IRX-5 [Rattus norvegicus]
 gi|71061623|gb|AAZ20811.1| iroquois homeobox protein 5 [Rattus norvegicus]
          Length = 484

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/100 (69%), Positives = 84/100 (84%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF NARRR
Sbjct: 110 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFVNARRR 169

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 170 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 209


>gi|84708634|gb|AAI10913.1| Iroquois homeobox 4 [Homo sapiens]
          Length = 519

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 136 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 194

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 195 NARRRLKKENKMTWPPRNKCADE 217


>gi|156547431|ref|XP_001604937.1| PREDICTED: hypothetical protein LOC100121331 [Nasonia vitripennis]
          Length = 650

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 70/78 (89%), Positives = 74/78 (94%), Gaps = 1/78 (1%)

Query: 60  GAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           G G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 228 GYGMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 287

Query: 119 ARRRLKKENKMTWEPKNK 136
           ARRRLKKENKMTWEP+N+
Sbjct: 288 ARRRLKKENKMTWEPRNR 305


>gi|332024324|gb|EGI64523.1| Homeobox protein caupolican [Acromyrmex echinatior]
          Length = 625

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 70/78 (89%), Positives = 74/78 (94%), Gaps = 1/78 (1%)

Query: 60  GAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           G G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 202 GYGMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 261

Query: 119 ARRRLKKENKMTWEPKNK 136
           ARRRLKKENKMTWEP+N+
Sbjct: 262 ARRRLKKENKMTWEPRNR 279


>gi|402908396|ref|XP_003919487.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-3 [Papio anubis]
          Length = 650

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 66/77 (85%), Positives = 74/77 (96%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188

Query: 127 NKMTWEPKNKTDDDDDA 143
           NKMTW P+++TDD+ +A
Sbjct: 189 NKMTWAPRSRTDDEGNA 205


>gi|403282284|ref|XP_003932583.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Saimiri
           boliviensis boliviensis]
          Length = 515

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 136 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 194

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 195 NARRRLKKENKMTWPPRNKCADE 217


>gi|391334728|ref|XP_003741753.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like
           [Metaseiulus occidentalis]
          Length = 504

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/78 (85%), Positives = 73/78 (93%), Gaps = 1/78 (1%)

Query: 60  GAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           G G DL  ARRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIIT+MTLTQVSTWFAN
Sbjct: 187 GYGMDLNGARRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITRMTLTQVSTWFAN 246

Query: 119 ARRRLKKENKMTWEPKNK 136
           ARRRLKKENKMTW P+N+
Sbjct: 247 ARRRLKKENKMTWSPRNR 264


>gi|334325458|ref|XP_003340649.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like, partial
           [Monodelphis domestica]
          Length = 400

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 136 RYGT-MDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 194

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 195 NARRRLKKENKMTWPPRNKCSDE 217


>gi|126296100|ref|XP_001363848.1| PREDICTED: iroquois-class homeodomain protein IRX-3-like isoform 1
           [Monodelphis domestica]
          Length = 519

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 146 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 205

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 206 NKMTWAPRSRTDEEGNAYGS 225


>gi|2765438|emb|CAA75233.1| Iroquois homeobox protein 3 [Mus musculus]
          Length = 507

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 74/77 (96%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 132 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 191

Query: 127 NKMTWEPKNKTDDDDDA 143
           NKMTW P+++TD++ +A
Sbjct: 192 NKMTWAPRSRTDEEGNA 208


>gi|410983541|ref|XP_003998097.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Felis catus]
          Length = 506

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 70/88 (79%), Positives = 78/88 (88%), Gaps = 3/88 (3%)

Query: 58  RYGAGYDLAA--RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYGA  +L+   RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 133 RYGA-VELSGTGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 191

Query: 116 FANARRRLKKENKMTWEPKNKTDDDDDA 143
           FANARRRLKKENKMTW PK+K  ++  A
Sbjct: 192 FANARRRLKKENKMTWAPKSKGGEERRA 219


>gi|348512671|ref|XP_003443866.1| PREDICTED: iroquois-class homeodomain protein irx-4-like
           [Oreochromis niloticus]
          Length = 413

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/109 (67%), Positives = 85/109 (77%), Gaps = 2/109 (1%)

Query: 58  RYG-AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG +  D A+RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIIT+MTLTQVSTWF
Sbjct: 113 RYGYSCSDGASRRKNATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWF 172

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQ 165
           ANARRRLKKENK+TW P+     DD     D DE +K  L  D+E  +Q
Sbjct: 173 ANARRRLKKENKVTWSPRACKSSDDRGCEDDSDEVEK-PLKSDKELPEQ 220


>gi|348552648|ref|XP_003462139.1| PREDICTED: iroquois-class homeodomain protein IRX-4-like [Cavia
           porcellus]
          Length = 487

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 98  RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 156

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  +D
Sbjct: 157 NARRRLKKENKMTWPPRNKCAED 179


>gi|7705555|ref|NP_057442.1| iroquois-class homeodomain protein IRX-4 [Homo sapiens]
 gi|12644347|sp|P78413.2|IRX4_HUMAN RecName: Full=Iroquois-class homeodomain protein IRX-4; AltName:
           Full=Homeodomain protein IRXA3; AltName: Full=Iroquois
           homeobox protein 4
 gi|6689882|gb|AAF23887.1|AF124733_1 iroquois homeobox protein 4 [Homo sapiens]
 gi|33356601|gb|AAQ16547.1| homeodomain protein IRXA3 [Homo sapiens]
 gi|119628543|gb|EAX08138.1| iroquois homeobox protein 4, isoform CRA_a [Homo sapiens]
 gi|119628544|gb|EAX08139.1| iroquois homeobox protein 4, isoform CRA_a [Homo sapiens]
 gi|187953259|gb|AAI36506.1| Iroquois homeobox 4 [Homo sapiens]
 gi|223460856|gb|AAI36507.1| Iroquois homeobox 4 [Homo sapiens]
 gi|261858350|dbj|BAI45697.1| iroquois homeobox protein 4 [synthetic construct]
 gi|371501720|dbj|BAL44219.1| iroquois-class homeodomain protein IRX-4 variant 1 [Homo sapiens]
 gi|371501724|dbj|BAL44221.1| iroquois-class homeodomain protein IRX-4 variant 3 [Homo sapiens]
          Length = 519

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 136 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 194

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 195 NARRRLKKENKMTWPPRNKCADE 217


>gi|397473016|ref|XP_003808019.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 1 [Pan
           paniscus]
 gi|397473018|ref|XP_003808020.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 2 [Pan
           paniscus]
          Length = 518

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 136 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 194

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 195 NARRRLKKENKMTWPPRNKCADE 217


>gi|194332582|ref|NP_001123780.1| uncharacterized protein LOC100170530 [Xenopus (Silurana)
           tropicalis]
 gi|156914767|gb|AAI52687.1| Irx3a protein [Danio rerio]
 gi|189442509|gb|AAI67543.1| LOC100170530 protein [Xenopus (Silurana) tropicalis]
          Length = 454

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 70/97 (72%), Positives = 82/97 (84%), Gaps = 1/97 (1%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWL+EH+KNPYPTKGEKIMLA ITKMTLTQVSTWFANARRRLKKE
Sbjct: 107 SRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLATITKMTLTQVSTWFANARRRLKKE 166

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKM 163
           NKMTW P+++TD++ +   SD  E D  D   DEE++
Sbjct: 167 NKMTWTPRSRTDEEGNVYNSD-HEGDDGDKREDEEEI 202


>gi|332227705|ref|XP_003263033.1| PREDICTED: iroquois-class homeodomain protein IRX-3, partial
           [Nomascus leucogenys]
          Length = 467

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 119 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 178

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 179 NKMTWAPRSRTDEEGNAYGS 198


>gi|195019738|ref|XP_001985044.1| GH14720 [Drosophila grimshawi]
 gi|193898526|gb|EDV97392.1| GH14720 [Drosophila grimshawi]
          Length = 669

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 69/76 (90%), Positives = 73/76 (96%), Gaps = 1/76 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 236 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 295

Query: 121 RRLKKENKMTWEPKNK 136
           RRLKKENKMTWEP+N+
Sbjct: 296 RRLKKENKMTWEPRNR 311


>gi|114662534|ref|XP_510969.2| PREDICTED: iroquois-class homeodomain protein IRX-3 isoform 2 [Pan
           troglodytes]
          Length = 500

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 189 NKMTWAPRSRTDEEGNAYGS 208


>gi|109128527|ref|XP_001092738.1| PREDICTED: iroquois-class homeodomain protein IRX-3-like [Macaca
           mulatta]
          Length = 409

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 189 NKMTWAPRSRTDEEGNAYGS 208


>gi|148222105|ref|NP_001079223.1| iroquois-class homeodomain protein irx-5 [Xenopus laevis]
 gi|82217197|sp|Q90XW5.1|IRX5_XENLA RecName: Full=Iroquois-class homeodomain protein irx-5; AltName:
           Full=Iroquois homeobox protein 5
 gi|15383985|gb|AAK96066.1|AF338158_1 iroquois-5 homeobox transcription factor [Xenopus laevis]
          Length = 474

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 72/103 (69%), Positives = 85/103 (82%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNA+R++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 107 YGDPAYRKNASRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 166

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQ 165
           LKKENKMTW P+N+++D+DD    D ++ ++DD    EE   Q
Sbjct: 167 LKKENKMTWTPRNRSEDEDDDENIDLEKNEEDDPSKLEENGNQ 209


>gi|73950382|ref|XP_544403.2| PREDICTED: iroquois-class homeodomain protein IRX-3 [Canis lupus
           familiaris]
          Length = 503

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 130 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 189

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 190 NKMTWAPRSRTDEEGNAYGS 209


>gi|395510753|ref|XP_003759635.1| PREDICTED: iroquois-class homeodomain protein irx-4-B-like
           [Sarcophilus harrisii]
          Length = 511

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 136 RYGT-MDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 194

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 195 NARRRLKKENKMTWPPRNKCSDE 217


>gi|440910031|gb|ELR59865.1| Iroquois-class homeodomain protein IRX-5, partial [Bos grunniens
           mutus]
          Length = 388

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 96  YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 155

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 156 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 195


>gi|238637235|ref|NP_001154863.1| iroquois-class homeodomain protein irx-4-B [Xenopus laevis]
 gi|263431784|sp|B7ZRT8.1|IRX4B_XENLA RecName: Full=Iroquois-class homeodomain protein irx-4-B; AltName:
           Full=Iroquois homeobox protein 4-B
 gi|213626269|gb|AAI70284.1| Unknown (protein for MGC:197011) [Xenopus laevis]
          Length = 495

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 74/83 (89%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D + RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGT-MDGSTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 194 NARRRLKKENKMTWPPRNKCSDE 216


>gi|82084460|sp|Q688D0.1|IRX4_XENTR RecName: Full=Iroquois-class homeodomain protein irx-4; AltName:
           Full=Iroquois homeobox protein 4
 gi|51890231|gb|AAU12854.1| Irx4 [Xenopus (Silurana) tropicalis]
          Length = 496

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 74/83 (89%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D + RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGT-MDGSTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 194 NARRRLKKENKMTWPPRNKCSDE 216


>gi|226371735|ref|NP_077312.2| iroquois-class homeodomain protein IRX-3 [Homo sapiens]
 gi|47117874|sp|P78415.3|IRX3_HUMAN RecName: Full=Iroquois-class homeodomain protein IRX-3; AltName:
           Full=Homeodomain protein IRXB1; AltName: Full=Iroquois
           homeobox protein 3
 gi|33356603|gb|AAQ16548.1| homeodomain protein IRXB1 [Homo sapiens]
          Length = 501

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 189 NKMTWAPRSRTDEEGNAYGS 208


>gi|354471675|ref|XP_003498066.1| PREDICTED: iroquois-class homeodomain protein IRX-3-like
           [Cricetulus griseus]
          Length = 531

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 227 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 286

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 287 NKMTWAPRSRTDEEGNAYGS 306


>gi|281339203|gb|EFB14787.1| hypothetical protein PANDA_007419 [Ailuropoda melanoleuca]
          Length = 462

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 123 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 181

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 182 NARRRLKKENKMTWPPRNKCADE 204


>gi|452881609|ref|NP_001263621.1| iroquois-class homeodomain protein irx-4 [Xenopus (Silurana)
           tropicalis]
          Length = 496

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 74/83 (89%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D + RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGT-MDGSTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 194 NARRRLKKENKMTWPPRNKCSDE 216


>gi|23272160|gb|AAH23667.1| Iroquois homeobox 3 [Homo sapiens]
 gi|123982386|gb|ABM82934.1| iroquois homeobox protein 3 [synthetic construct]
 gi|157928342|gb|ABW03467.1| iroquois homeobox 3 [synthetic construct]
          Length = 501

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 189 NKMTWAPRSRTDEEGNAYGS 208


>gi|74209013|dbj|BAE21235.1| unnamed protein product [Mus musculus]
          Length = 515

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 137 RYGT-VDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 195

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 196 NARRRLKKENKMTWPPRNKYADE 218


>gi|148540304|ref|NP_001091936.1| iroquois-class homeodomain protein IRX-4 [Bos taurus]
 gi|134025217|gb|AAI34435.1| IRX4 protein [Bos taurus]
 gi|296475647|tpg|DAA17762.1| TPA: iroquois homeobox 4 [Bos taurus]
          Length = 522

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 136 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 194

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 195 NARRRLKKENKMTWPPRNKCADE 217


>gi|402871095|ref|XP_003899521.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 1
           [Papio anubis]
 gi|402871097|ref|XP_003899522.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 2
           [Papio anubis]
 gi|402871099|ref|XP_003899523.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 3
           [Papio anubis]
          Length = 515

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 134 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 192

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 193 NARRRLKKENKMTWPPRNKCADE 215


>gi|397480687|ref|XP_003811607.1| PREDICTED: iroquois-class homeodomain protein IRX-3 [Pan paniscus]
          Length = 516

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 145 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 204

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 205 NKMTWAPRSRTDEEGNAYGS 224


>gi|47229510|emb|CAF99498.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 368

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/91 (72%), Positives = 76/91 (83%)

Query: 64  DLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           D A+RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIIT+MTLTQVSTWFANARRRL
Sbjct: 115 DGASRRKNATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRL 174

Query: 124 KKENKMTWEPKNKTDDDDDAIISDCDEKDKD 154
           KKENK+TW P+     DD     D D+ +K+
Sbjct: 175 KKENKVTWSPRAGKSSDDRGCEEDSDDAEKE 205


>gi|47575744|ref|NP_001001216.1| iroquois-class homeodomain protein irx-3 [Xenopus (Silurana)
           tropicalis]
 gi|82185674|sp|Q6NVN3.1|IRX3_XENTR RecName: Full=Iroquois-class homeodomain protein irx-3; AltName:
           Full=Iroquois homeobox protein 3
 gi|45709726|gb|AAH67972.1| iroquois homeobox 3 [Xenopus (Silurana) tropicalis]
 gi|89268616|emb|CAJ82766.1| iroquois homeobox protein 3 [Xenopus (Silurana) tropicalis]
          Length = 448

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 110 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 169

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 170 NKMTWAPRSRTDEEGNAYGS 189


>gi|109076663|ref|XP_001097842.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Macaca
           mulatta]
          Length = 515

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 134 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 192

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 193 NARRRLKKENKMTWPPRNKCADE 215


>gi|395859481|ref|XP_003802067.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Otolemur
           garnettii]
          Length = 519

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 136 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 194

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 195 NARRRLKKENKMTWPPRNKCADE 217


>gi|364087492|gb|AEW46996.1| iroquois homeobox 5 [Callorhinchus milii]
          Length = 517

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 86/111 (77%), Gaps = 9/111 (8%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 107 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 166

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKGH 173
           LKKENKMTW P+N+++D+++    D ++ D D+          H  + KGH
Sbjct: 167 LKKENKMTWTPRNRSEDEEEEENIDLEKNDDDE---------PHKSLEKGH 208


>gi|338718731|ref|XP_003363885.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 2
           [Equus caballus]
          Length = 517

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 134 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 192

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 193 NARRRLKKENKMTWPPRNKCVDE 215


>gi|119603221|gb|EAW82815.1| iroquois homeobox protein 3, isoform CRA_b [Homo sapiens]
          Length = 501

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 189 NKMTWAPRSRTDEEGNAYGS 208


>gi|33356605|gb|AAQ16549.1| homeodomain protein IRXB1 [Homo sapiens]
          Length = 501

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 189 NKMTWAPRSRTDEEGNAYGS 208


>gi|380014060|ref|XP_003691061.1| PREDICTED: homeobox protein araucan-like [Apis florea]
          Length = 620

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 69/78 (88%), Positives = 74/78 (94%), Gaps = 1/78 (1%)

Query: 60  GAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           G G DL  ARRKNATRE+T+TLKAWLN+HKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 217 GYGMDLNGARRKNATRETTSTLKAWLNDHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 276

Query: 119 ARRRLKKENKMTWEPKNK 136
           ARRRLKKENKMTWEP+N+
Sbjct: 277 ARRRLKKENKMTWEPRNR 294


>gi|328777967|ref|XP_396291.3| PREDICTED: homeobox protein araucan [Apis mellifera]
          Length = 622

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 69/78 (88%), Positives = 74/78 (94%), Gaps = 1/78 (1%)

Query: 60  GAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           G G DL  ARRKNATRE+T+TLKAWLN+HKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 217 GYGMDLNGARRKNATRETTSTLKAWLNDHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 276

Query: 119 ARRRLKKENKMTWEPKNK 136
           ARRRLKKENKMTWEP+N+
Sbjct: 277 ARRRLKKENKMTWEPRNR 294


>gi|301766924|ref|XP_002918882.1| PREDICTED: iroquois-class homeodomain protein IRX-4-like
           [Ailuropoda melanoleuca]
          Length = 500

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 158 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 216

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 217 NARRRLKKENKMTWPPRNKCADE 239


>gi|194224044|ref|XP_001917484.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 1
           [Equus caballus]
          Length = 517

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 134 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 192

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 193 NARRRLKKENKMTWPPRNKCVDE 215


>gi|74228933|dbj|BAE21938.1| unnamed protein product [Mus musculus]
          Length = 480

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 125 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 185 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 228


>gi|242023070|ref|XP_002431959.1| Iroquois-class homeodomain protein IRX-1, putative [Pediculus
           humanus corporis]
 gi|212517310|gb|EEB19221.1| Iroquois-class homeodomain protein IRX-1, putative [Pediculus
           humanus corporis]
          Length = 362

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 66/71 (92%), Positives = 70/71 (98%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
            ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK
Sbjct: 5   GARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 64

Query: 126 ENKMTWEPKNK 136
           ENKMTWEP+N+
Sbjct: 65  ENKMTWEPRNR 75


>gi|397473020|ref|XP_003808021.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 3 [Pan
           paniscus]
 gi|397473022|ref|XP_003808022.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 4 [Pan
           paniscus]
          Length = 544

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/98 (72%), Positives = 78/98 (79%), Gaps = 3/98 (3%)

Query: 43  GIDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLA 102
           G+D  V+  S      YG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLA
Sbjct: 149 GLDLSVLGRS--PGSLYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLA 205

Query: 103 IITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDD 140
           IITKMTLTQVSTWFANARRRLKKENKMTW P+NK  D+
Sbjct: 206 IITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADE 243


>gi|195126379|ref|XP_002007648.1| GI12266 [Drosophila mojavensis]
 gi|193919257|gb|EDW18124.1| GI12266 [Drosophila mojavensis]
          Length = 735

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 69/76 (90%), Positives = 73/76 (96%), Gaps = 1/76 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 261 GMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 320

Query: 121 RRLKKENKMTWEPKNK 136
           RRLKKENKMTWEP+N+
Sbjct: 321 RRLKKENKMTWEPRNR 336


>gi|350404409|ref|XP_003487095.1| PREDICTED: hypothetical protein LOC100743699 [Bombus impatiens]
          Length = 768

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 69/78 (88%), Positives = 74/78 (94%), Gaps = 1/78 (1%)

Query: 60  GAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           G G DL  ARRKNATRE+T+TLKAWLN+HKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 360 GYGMDLNGARRKNATRETTSTLKAWLNDHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 419

Query: 119 ARRRLKKENKMTWEPKNK 136
           ARRRLKKENKMTWEP+N+
Sbjct: 420 ARRRLKKENKMTWEPRNR 437


>gi|121223344|gb|ABM47727.1| IRX6 [Saguinus labiatus]
          Length = 102

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 72/99 (72%), Positives = 81/99 (81%), Gaps = 6/99 (6%)

Query: 59  YGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           YGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 1   YGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 60

Query: 118 NARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           NARRRLKKENKMTW PKNK  ++  A     + +++D L
Sbjct: 61  NARRRLKKENKMTWAPKNKGGEERKA-----ESREEDSL 94


>gi|359465568|ref|NP_001240751.1| iroquois-class homeodomain protein IRX-3 isoform 1 [Mus musculus]
 gi|74224525|dbj|BAE25251.1| unnamed protein product [Mus musculus]
          Length = 522

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 74/77 (96%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 132 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 191

Query: 127 NKMTWEPKNKTDDDDDA 143
           NKMTW P+++TD++ +A
Sbjct: 192 NKMTWAPRSRTDEEGNA 208


>gi|395505973|ref|XP_003757310.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Sarcophilus
           harrisii]
          Length = 526

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 70/107 (65%), Positives = 80/107 (74%), Gaps = 4/107 (3%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           +  +ARRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 152 FSGSARRKNATRETTSTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 211

Query: 123 LKKENKMTWEPKNKTDDDDDAIIS----DCDEKDKDDLMMDEEKMKQ 165
           LKKENKMTW PKNK  ++            +E    DL  D +  K+
Sbjct: 212 LKKENKMTWSPKNKAGEEKKEERREDSYGANEGQVSDLSADPKACKK 258


>gi|148228579|ref|NP_001084204.1| iroquois-class homeodomain protein irx-3 [Xenopus laevis]
 gi|2598958|gb|AAB84027.1| homeobox transcription factor iriquois 3 [Xenopus laevis]
          Length = 448

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 110 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 169

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 170 NKMTWAPRSRTDEEGNAYGS 189


>gi|263432223|sp|O42261.2|IRX3_XENLA RecName: Full=Iroquois-class homeodomain protein irx-3; AltName:
           Full=Iroquois homeobox protein 3; Short=Xiro3
 gi|80479311|gb|AAI08596.1| Xiro3 protein [Xenopus laevis]
          Length = 448

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 110 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 169

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 170 NKMTWAPRSRTDEEGNAYGS 189


>gi|319738603|ref|NP_001188351.1| iroquois-class homeodomain protein irx-1 [Xenopus (Silurana)
           tropicalis]
 gi|82086070|sp|Q6F2E3.1|IRX1_XENTR RecName: Full=Iroquois-class homeodomain protein irx-1; AltName:
           Full=Iroquois homeobox protein 1
 gi|50253602|gb|AAT72003.1| iro1 [Xenopus (Silurana) tropicalis]
          Length = 467

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 71/100 (71%), Positives = 82/100 (82%), Gaps = 1/100 (1%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 124 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 183

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDDLMMDEE 161
           LKKENK+TW  ++K DD+     ++ D EK++DD  +D E
Sbjct: 184 LKKENKVTWGARSKEDDNIFGSDTEGDHEKNEDDEEIDLE 223


>gi|410949853|ref|XP_003981631.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-4 [Felis catus]
          Length = 469

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 137 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 195

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 196 NARRRLKKENKMTWPPRNKCADE 218


>gi|391333565|ref|XP_003741183.1| PREDICTED: iroquois-class homeodomain protein IRX-1-like
           [Metaseiulus occidentalis]
          Length = 287

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 66/79 (83%), Positives = 73/79 (92%)

Query: 64  DLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           D  ARRKNATRE+T TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL
Sbjct: 2   DSVARRKNATRETTNTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 61

Query: 124 KKENKMTWEPKNKTDDDDD 142
           KKENKMTWEP+N+  +++D
Sbjct: 62  KKENKMTWEPRNRPAEEED 80


>gi|371501722|dbj|BAL44220.1| iroquois-class homeodomain protein IRX-4 variant 2 [Homo sapiens]
 gi|371501726|dbj|BAL44222.1| iroquois-class homeodomain protein IRX-4 variant 4 [Homo sapiens]
          Length = 545

 Score =  142 bits (358), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 69/98 (70%), Positives = 76/98 (77%), Gaps = 1/98 (1%)

Query: 43  GIDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLA 102
           GI   +  +       YG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLA
Sbjct: 147 GIGLDLSGLGRSPGSLYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLA 205

Query: 103 IITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDD 140
           IITKMTLTQVSTWFANARRRLKKENKMTW P+NK  D+
Sbjct: 206 IITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADE 243


>gi|148234102|ref|NP_001081649.1| iroquois-class homeodomain protein irx-1-A [Xenopus laevis]
 gi|82225281|sp|Q9YGK8.1|IRX1A_XENLA RecName: Full=Iroquois-class homeodomain protein irx-1-A; AltName:
           Full=Iroquois homeobox protein 1-A; Short=Xiro-1;
           Short=Xiro1
 gi|4469336|emb|CAB38329.1| homeobox Iro protein [Xenopus laevis]
 gi|213623138|gb|AAI69344.1| Homeobox Iro protein [Xenopus laevis]
 gi|213627746|gb|AAI69342.1| Homeobox Iro protein [Xenopus laevis]
          Length = 467

 Score =  142 bits (358), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 71/100 (71%), Positives = 81/100 (81%), Gaps = 1/100 (1%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 124 YGDPGRPKNATRESTGTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 183

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDDLMMDEE 161
           LKKENK+TW  ++K DD+     ++ D EK++DD  +D E
Sbjct: 184 LKKENKVTWGARSKEDDNIFGSDNEGDHEKNEDDEEIDLE 223


>gi|344272615|ref|XP_003408127.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Loxodonta
           africana]
          Length = 519

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 67/83 (80%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 137 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 195

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  ++
Sbjct: 196 NARRRLKKENKMTWPPRNKCGEE 218


>gi|134288845|ref|NP_034703.2| iroquois-class homeodomain protein IRX-1 [Mus musculus]
 gi|408360343|sp|P81068.4|IRX1_MOUSE RecName: Full=Iroquois-class homeodomain protein IRX-1; AltName:
           Full=Homeodomain protein IRXA1; AltName: Full=Iroquois
           homeobox protein 1
 gi|148705094|gb|EDL37041.1| Iroquois related homeobox 1 (Drosophila) [Mus musculus]
 gi|151555507|gb|AAI48653.1| Iroquois related homeobox 1 (Drosophila) [synthetic construct]
          Length = 480

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 125 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 185 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 228


>gi|157823737|ref|NP_001100801.1| iroquois homeobox 1 [Rattus norvegicus]
 gi|149032784|gb|EDL87639.1| rCG42106 [Rattus norvegicus]
          Length = 480

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 125 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 185 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 228


>gi|47215229|emb|CAF96727.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 420

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/92 (76%), Positives = 77/92 (83%), Gaps = 7/92 (7%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG+  D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGS-MDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193

Query: 118 NARRRLKKENKMTWEPKNKT------DDDDDA 143
           NARRRLKKENKMTW P+NK       D+D+D 
Sbjct: 194 NARRRLKKENKMTWPPRNKGSEEKRYDEDEDG 225


>gi|327281224|ref|XP_003225349.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           irx-1-like [Anolis carolinensis]
          Length = 475

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/168 (49%), Positives = 105/168 (62%), Gaps = 19/168 (11%)

Query: 3   YTSPETKTLRP---ELQLFTQVPIQVNISSTKVPALQSRRQLCGIDKQVIQVSNLTAVRY 59
           Y++P      P   +L LF+Q+  Q  +           ++  G+       ++ T   Y
Sbjct: 83  YSAPNYSAFLPYTADLSLFSQMGSQYEL-----------KESPGVHPATF-AAHTTPGYY 130

Query: 60  GAG---YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
             G   Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 131 PYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 190

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDDLMMDEEKM 163
           ANARRRLKKENK+TW  ++K DD      ++ D EK++DD  +D E +
Sbjct: 191 ANARRRLKKENKVTWGARSKEDDHIFGSDNEGDPEKNEDDEEIDLESI 238


>gi|345796334|ref|XP_535801.3| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-4 [Canis lupus familiaris]
          Length = 373

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 137 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 195

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 196 NARRRLKKENKMTWPPRNKCADE 218


>gi|327270173|ref|XP_003219864.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like [Anolis
           carolinensis]
          Length = 471

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 74/83 (89%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D + RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 137 RYGT-MDGSTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 195

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 196 NARRRLKKENKMTWPPRNKCADE 218


>gi|432104635|gb|ELK31247.1| Iroquois-class homeodomain protein IRX-4 [Myotis davidii]
          Length = 460

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 92  RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 150

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 151 NARRRLKKENKMTWPPRNKCADE 173


>gi|357607494|gb|EHJ65533.1| mirror [Danaus plexippus]
          Length = 269

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 66/71 (92%), Positives = 70/71 (98%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
            ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK
Sbjct: 5   GARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 64

Query: 126 ENKMTWEPKNK 136
           ENKMTWEP+N+
Sbjct: 65  ENKMTWEPRNR 75


>gi|390460144|ref|XP_002806678.2| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-2 [Callithrix jacchus]
          Length = 471

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 68/86 (79%), Positives = 74/86 (86%), Gaps = 6/86 (6%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 116 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 175

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKD 152
           NKMTW PK +  D+D+      DE D
Sbjct: 176 NKMTWXPKEQKRDEDE------DEGD 195


>gi|431914129|gb|ELK15388.1| Iroquois-class homeodomain protein IRX-5 [Pteropus alecto]
          Length = 358

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 19  YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 78

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 79  LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPPKPEDK 118


>gi|355710200|gb|EHH31664.1| hypothetical protein EGK_12784, partial [Macaca mulatta]
          Length = 290

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 28  YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 87

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 88  LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 127


>gi|119603225|gb|EAW82819.1| hCG1641231 [Homo sapiens]
          Length = 190

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 45  YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 104

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 105 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 144


>gi|395857069|ref|XP_003800935.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Otolemur
           garnettii]
          Length = 474

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 125 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 185 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 228


>gi|328697559|ref|XP_001952319.2| PREDICTED: hypothetical protein LOC100169212 [Acyrthosiphon pisum]
          Length = 599

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 70/78 (89%), Positives = 74/78 (94%), Gaps = 1/78 (1%)

Query: 60  GAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           G G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 228 GYGMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 287

Query: 119 ARRRLKKENKMTWEPKNK 136
           ARRRLKKENKMTWEP+N+
Sbjct: 288 ARRRLKKENKMTWEPRNR 305


>gi|426385227|ref|XP_004059126.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Gorilla
           gorilla gorilla]
          Length = 290

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 70/77 (90%)

Query: 64  DLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL
Sbjct: 167 DSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 226

Query: 124 KKENKMTWEPKNKTDDD 140
           KKENKMTW P+NK  D+
Sbjct: 227 KKENKMTWPPRNKCADE 243


>gi|193083631|gb|ACF10236.1| iroquois A isoform 2 [Branchiostoma lanceolatum]
          Length = 486

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 63/73 (86%), Positives = 70/73 (95%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RRKNATR++T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN
Sbjct: 134 RRKNATRDATSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 193

Query: 128 KMTWEPKNKTDDD 140
           KMTW P+N+  D+
Sbjct: 194 KMTWSPRNRCGDE 206


>gi|209529858|gb|ACI49802.1| iroquois A isoform 1 [Branchiostoma floridae]
          Length = 459

 Score =  142 bits (357), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 63/73 (86%), Positives = 70/73 (95%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RRKNATR++T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN
Sbjct: 134 RRKNATRDATSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 193

Query: 128 KMTWEPKNKTDDD 140
           KMTW P+N+  D+
Sbjct: 194 KMTWSPRNRCGDE 206


>gi|358421017|ref|XP_003584799.1| PREDICTED: iroquois-class homeodomain protein IRX-4-like, partial
           [Bos taurus]
          Length = 423

 Score =  142 bits (357), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 37  RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 95

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 96  NARRRLKKENKMTWPPRNKCADE 118


>gi|193083633|gb|ACF10237.1| iroquois A isoform 1 [Branchiostoma floridae]
          Length = 461

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 63/73 (86%), Positives = 70/73 (95%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RRKNATR++T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN
Sbjct: 134 RRKNATRDATSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 193

Query: 128 KMTWEPKNKTDDD 140
           KMTW P+N+  D+
Sbjct: 194 KMTWSPRNRCGDE 206


>gi|71896495|ref|NP_001025509.1| iroquois-class homeodomain protein IRX-1 [Gallus gallus]
 gi|7688150|emb|CAB89806.1| iroquois homologue-1 [Gallus gallus]
          Length = 467

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 82/104 (78%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 121 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 180

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D +   SD +   EK +DD  +D E +
Sbjct: 181 LKKENKVTWGSRSKDQEDANLFGSDNEGDPEKTEDDEEIDLESI 224


>gi|441615031|ref|XP_003263249.2| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-4 [Nomascus leucogenys]
          Length = 500

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 69/98 (70%), Positives = 77/98 (78%), Gaps = 1/98 (1%)

Query: 43  GIDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLA 102
           GI   +  +       YG+  D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLA
Sbjct: 111 GIGLDLSGLGRSPGSLYGS-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLA 169

Query: 103 IITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDD 140
           IITKMTLTQVSTWFANARRRLKKENKMTW P+NK  D+
Sbjct: 170 IITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADE 207


>gi|410905171|ref|XP_003966065.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like
           [Takifugu rubripes]
          Length = 471

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 67/83 (80%), Positives = 74/83 (89%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG+  D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGS-MDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  ++
Sbjct: 194 NARRRLKKENKMTWPPRNKGSEE 216


>gi|432852744|ref|XP_004067363.1| PREDICTED: iroquois-class homeodomain protein irx-5-like isoform 2
           [Oryzias latipes]
          Length = 446

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 68/93 (73%), Positives = 81/93 (87%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 109 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 168

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDD 155
           LKKENKMTW P+N+++D+++    D ++ D D+
Sbjct: 169 LKKENKMTWTPRNRSEDEEEDENIDLEKNDDDE 201


>gi|193083629|gb|ACF10235.1| iroquois A isoform 1 [Branchiostoma lanceolatum]
          Length = 461

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 63/73 (86%), Positives = 70/73 (95%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RRKNATR++T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN
Sbjct: 134 RRKNATRDATSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 193

Query: 128 KMTWEPKNKTDDD 140
           KMTW P+N+  D+
Sbjct: 194 KMTWSPRNRCGDE 206


>gi|126320812|ref|XP_001363532.1| PREDICTED: iroquois-class homeodomain protein irx-1-A-like
           [Monodelphis domestica]
          Length = 468

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 82/104 (78%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 120 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 179

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D +   SD +   EK +DD  +D E +
Sbjct: 180 LKKENKVTWGARSKDQEDGNLFGSDNEGDPEKTEDDEEIDLESI 223


>gi|47216629|emb|CAG05430.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 452

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/113 (64%), Positives = 86/113 (76%), Gaps = 5/113 (4%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 109 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 168

Query: 123 LKKENKMTWEPKNKT-----DDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMV 170
           LKKENKMTW P+N++     D++ D   +D DE +K     D    +  H++V
Sbjct: 169 LKKENKMTWTPRNRSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEADHKLV 221


>gi|432884532|ref|XP_004074483.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like [Oryzias
           latipes]
          Length = 390

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/97 (70%), Positives = 79/97 (81%), Gaps = 1/97 (1%)

Query: 58  RYG-AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG +  D ++RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIIT+MTLTQVSTWF
Sbjct: 104 RYGHSCLDSSSRRKNATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWF 163

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDK 153
           ANARRRLKKENK+TW P+     DD     D DE ++
Sbjct: 164 ANARRRLKKENKVTWSPRACKSSDDRGYEDDSDEAER 200


>gi|449493910|ref|XP_002189063.2| PREDICTED: iroquois-class homeodomain protein irx-1-A-like
           [Taeniopygia guttata]
          Length = 400

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 83/104 (79%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 54  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 113

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D +   SD +   EK++DD  +D E +
Sbjct: 114 LKKENKVTWGSRSKDQEDANLFGSDNEGDPEKNEDDEEIDLESI 157


>gi|348500046|ref|XP_003437584.1| PREDICTED: iroquois-class homeodomain protein irx-5-like isoform 1
           [Oreochromis niloticus]
          Length = 444

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/93 (73%), Positives = 81/93 (87%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 109 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 168

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDD 155
           LKKENKMTW P+N+++D+++    D ++ D D+
Sbjct: 169 LKKENKMTWTPRNRSEDEEEDENIDLEKNDDDE 201


>gi|7576704|gb|AAF63954.1|AF165984_1 iroquois-class homeobox protein Irx1 [Mus musculus]
          Length = 480

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 80/104 (76%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 125 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  + K  +D     SD +   EK +DD  +D E +
Sbjct: 185 LKKENKVTWGARTKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 228


>gi|297674902|ref|XP_002815446.1| PREDICTED: iroquois-class homeodomain protein IRX-2 [Pongo abelii]
          Length = 472

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/88 (77%), Positives = 77/88 (87%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 117 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 176

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKD 154
           NKMTW P+NK++D+D+        KD+ 
Sbjct: 177 NKMTWAPRNKSEDEDEDEGDAARSKDES 204


>gi|114598888|ref|XP_001175262.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Pan
           troglodytes]
          Length = 293

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 131 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 189

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 190 NARRRLKKENKMTWPPRNKCADE 212


>gi|449272569|gb|EMC82431.1| Iroquois-class homeodomain protein irx-1-A, partial [Columba livia]
          Length = 381

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 83/104 (79%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 33  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 92

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D +   SD +   EK++DD  +D E +
Sbjct: 93  LKKENKVTWGSRSKDQEDANIFGSDNEGDPEKNEDDEEIDLESI 136


>gi|432852742|ref|XP_004067362.1| PREDICTED: iroquois-class homeodomain protein irx-5-like isoform 1
           [Oryzias latipes]
          Length = 449

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/131 (58%), Positives = 88/131 (67%), Gaps = 23/131 (17%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 109 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 168

Query: 123 LKKENKMTWEPKN--------------KTDDDD--------DAIISDCDEK-DKDDLMMD 159
           LKKENKMTW P+N              K DDD+        D+  ++ D K +  D+  D
Sbjct: 169 LKKENKMTWTPRNRSEDEEEDENIDLEKNDDDEPNKPLDKGDSTDTEADHKLNPGDISCD 228

Query: 160 EEKMKQHHRMV 170
             K + H + V
Sbjct: 229 RFKEESHGKEV 239


>gi|426243526|ref|XP_004015605.1| PREDICTED: iroquois-class homeodomain protein IRX-3 [Ovis aries]
          Length = 429

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/74 (87%), Positives = 70/74 (94%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188

Query: 127 NKMTWEPKNKTDDD 140
           NKMTW P+NK  D+
Sbjct: 189 NKMTWPPRNKCADE 202


>gi|46559370|ref|NP_034704.1| iroquois-class homeodomain protein IRX-2 [Mus musculus]
 gi|20178298|sp|P81066.2|IRX2_MOUSE RecName: Full=Iroquois-class homeodomain protein IRX-2; AltName:
           Full=Homeodomain protein IRXA2; AltName: Full=Iroquois
           homeobox protein 2; AltName: Full=Iroquois-class
           homeobox protein Irx6
 gi|9965418|gb|AAG10083.1|AF295369_1 iroquois-class homeobox protein IRX2 [Mus musculus]
 gi|20988227|gb|AAH29750.1| Iroquois related homeobox 2 (Drosophila) [Mus musculus]
 gi|74138221|dbj|BAE28598.1| unnamed protein product [Mus musculus]
          Length = 474

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 117 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 176

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 177 NKMTWAPRNKS 187


>gi|39930475|ref|NP_150366.1| iroquois-class homeodomain protein IRX-2 [Homo sapiens]
 gi|197100900|ref|NP_001127694.1| iroquois-class homeodomain protein IRX-2 [Homo sapiens]
 gi|47117908|sp|Q9BZI1.2|IRX2_HUMAN RecName: Full=Iroquois-class homeodomain protein IRX-2; AltName:
           Full=Homeodomain protein IRXA2; AltName: Full=Iroquois
           homeobox protein 2
 gi|33356597|gb|AAQ16545.1| homeodomain protein IRXA2 [Homo sapiens]
 gi|33356599|gb|AAQ16546.1| homeodomain protein IRXA2 [Homo sapiens]
 gi|40806997|gb|AAH65189.1| Iroquois homeobox 2 [Homo sapiens]
 gi|51534924|dbj|BAD37140.1| iroquois homeobox protein 2 [Homo sapiens]
          Length = 471

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 116 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 175

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 176 NKMTWAPRNKS 186


>gi|74003047|ref|XP_848580.1| PREDICTED: iroquois-class homeodomain protein IRX-2 isoform 5
           [Canis lupus familiaris]
          Length = 472

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 115 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 174

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 175 NKMTWAPRNKS 185


>gi|114598893|ref|XP_526826.2| PREDICTED: iroquois-class homeodomain protein IRX-2 [Pan
           troglodytes]
 gi|410214616|gb|JAA04527.1| iroquois homeobox 2 [Pan troglodytes]
 gi|410214618|gb|JAA04528.1| iroquois homeobox 2 [Pan troglodytes]
 gi|410297064|gb|JAA27132.1| iroquois homeobox 2 [Pan troglodytes]
          Length = 471

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 116 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 175

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 176 NKMTWAPRNKS 186


>gi|113680231|ref|NP_001038692.1| iroquois-class homeodomain protein IRX-5 [Danio rerio]
 gi|94732882|emb|CAK05487.1| iroquois homeobox protein 5 [Danio rerio]
          Length = 446

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/93 (73%), Positives = 81/93 (87%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 109 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 168

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDD 155
           LKKENKMTW P+N+++D+++    D ++ D D+
Sbjct: 169 LKKENKMTWTPRNRSEDEEEDENIDLEKNDDDE 201


>gi|363738154|ref|XP_001234059.2| PREDICTED: uncharacterized protein LOC374184 [Gallus gallus]
          Length = 501

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/84 (79%), Positives = 74/84 (88%), Gaps = 1/84 (1%)

Query: 58  RYG-AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG   +  +ARRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 83  RYGPVDFTASARRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 142

Query: 117 ANARRRLKKENKMTWEPKNKTDDD 140
           ANARRRLKKENKMTW PKNK  ++
Sbjct: 143 ANARRRLKKENKMTWSPKNKAGEE 166


>gi|297487832|ref|XP_002696496.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Bos taurus]
 gi|296475649|tpg|DAA17764.1| TPA: iroquois homeobox protein 1-like [Bos taurus]
          Length = 476

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 126 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 185

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 186 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 229


>gi|344272597|ref|XP_003408118.1| PREDICTED: iroquois-class homeodomain protein IRX-2 [Loxodonta
           africana]
          Length = 469

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 115 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 174

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 175 NKMTWAPRNKS 185


>gi|109076678|ref|XP_001082149.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Macaca
           mulatta]
          Length = 480

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 125 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 185 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 228


>gi|88759335|ref|NP_001034594.1| Iroquois related homeobox 2 [Rattus norvegicus]
          Length = 474

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 117 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 176

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 177 NKMTWAPRNKS 187


>gi|348500048|ref|XP_003437585.1| PREDICTED: iroquois-class homeodomain protein irx-5-like isoform 2
           [Oreochromis niloticus]
          Length = 451

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/93 (73%), Positives = 81/93 (87%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 109 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 168

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDD 155
           LKKENKMTW P+N+++D+++    D ++ D D+
Sbjct: 169 LKKENKMTWTPRNRSEDEEEDENIDLEKNDDDE 201


>gi|355710199|gb|EHH31663.1| hypothetical protein EGK_12782, partial [Macaca mulatta]
          Length = 157

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 40  SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 99

Query: 127 NKMTWEPKNKTDDDDDAIIS 146
           NKMTW P+++TD++ +A  S
Sbjct: 100 NKMTWAPRSRTDEEGNAYGS 119


>gi|14764405|gb|AAK08651.1| iroquois homeobox protein Ziro5 [Danio rerio]
          Length = 446

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/111 (63%), Positives = 81/111 (72%), Gaps = 12/111 (10%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 109 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 168

Query: 123 LKKENKMTWEPKNKTD------------DDDDAIISDCDEKDKDDLMMDEE 161
           LKKENKMTW P+N+++            +DDD      D+ D  D   D +
Sbjct: 169 LKKENKMTWTPRNRSEDEEEDENIDLEKNDDDEPNKPADKGDSTDTEADHK 219


>gi|334311808|ref|XP_001372954.2| PREDICTED: iroquois-class homeodomain protein IRX-6-like
           [Monodelphis domestica]
          Length = 498

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/74 (87%), Positives = 70/74 (94%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           +  +ARRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 152 FSGSARRKNATRETTSTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 211

Query: 123 LKKENKMTWEPKNK 136
           LKKENKMTW PKNK
Sbjct: 212 LKKENKMTWSPKNK 225


>gi|1899230|gb|AAB50007.1| iroquois-class homeodomain protein IRX-2a [Homo sapiens]
          Length = 173

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 28  YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 87

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 88  LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 127


>gi|332228151|ref|XP_003263255.1| PREDICTED: iroquois-class homeodomain protein IRX-2 [Nomascus
           leucogenys]
          Length = 471

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/88 (77%), Positives = 77/88 (87%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 116 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 175

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKD 154
           NKMTW P+NK++D+D+        KD+ 
Sbjct: 176 NKMTWAPRNKSEDEDEDEGDAARSKDES 203


>gi|432863923|ref|XP_004070189.1| PREDICTED: iroquois-class homeodomain protein irx-5-like [Oryzias
           latipes]
          Length = 434

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/127 (58%), Positives = 86/127 (67%), Gaps = 5/127 (3%)

Query: 11  LRPELQLFTQVPIQVNISSTKVPALQSRRQLCGIDKQVIQVSNLTAVRYGAGYDLAARRK 70
             P+LQ   +     ++S    PA      + G          L A  YG     +A RK
Sbjct: 56  FSPQLQYGVEQQAAASLSPFLSPAFDPSAGVSG-SLDFHPFGPLGAFPYGD----SAYRK 110

Query: 71  NATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 130
           NATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT
Sbjct: 111 NATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 170

Query: 131 WEPKNKT 137
           W P+N++
Sbjct: 171 WTPRNRS 177


>gi|297674907|ref|XP_002815448.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Pongo abelii]
          Length = 480

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 125 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 185 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 228


>gi|410911150|ref|XP_003969053.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like
           [Takifugu rubripes]
          Length = 405

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/90 (73%), Positives = 75/90 (83%)

Query: 64  DLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           D A+RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIIT+MTLTQVSTWFANARRRL
Sbjct: 116 DGASRRKNATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRL 175

Query: 124 KKENKMTWEPKNKTDDDDDAIISDCDEKDK 153
           KKENK+TW P+     DD     D D+ +K
Sbjct: 176 KKENKVTWSPRACKSSDDRGCEDDSDDAEK 205


>gi|426385199|ref|XP_004059114.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Gorilla
           gorilla gorilla]
 gi|426385201|ref|XP_004059115.1| PREDICTED: iroquois-class homeodomain protein IRX-1-like [Gorilla
           gorilla gorilla]
          Length = 480

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 125 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 185 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 228


>gi|147907128|ref|NP_001090157.1| iroquois-class homeodomain protein irx-1-B [Xenopus laevis]
 gi|123907624|sp|Q2TAQ8.1|IRX1B_XENLA RecName: Full=Iroquois-class homeodomain protein irx-1-B; AltName:
           Full=Iroquois homeobox protein 1-B
 gi|83405812|gb|AAI10768.1| MGC131109 protein [Xenopus laevis]
          Length = 462

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/166 (50%), Positives = 102/166 (61%), Gaps = 19/166 (11%)

Query: 3   YTSPETKTLRP---ELQLFTQVPIQVNISSTKVPALQSRRQLCGIDKQVIQVSNLTAVRY 59
           Y+SP      P   +L LF+Q+  Q  +           +   G+       ++ T   Y
Sbjct: 65  YSSPNYSAFLPYTTDLTLFSQMGSQYEL-----------KDNPGVHPATF-AAHTTPGYY 112

Query: 60  GAG---YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
             G   Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 113 PYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 172

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDDLMMDEE 161
           ANARRRLKKENK+TW    K DD+     ++ D EK++DD  +D E
Sbjct: 173 ANARRRLKKENKVTWGAMGKEDDNIFGSDNEGDHEKNEDDEEIDLE 218


>gi|341957812|gb|AEL13772.1| Irx1/3, partial [Lethenteron camtschaticum]
          Length = 151

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/89 (75%), Positives = 77/89 (86%)

Query: 60  GAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 119
           G  Y   +R KNATRESTATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANA
Sbjct: 20  GFQYTDPSRPKNATRESTATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 79

Query: 120 RRRLKKENKMTWEPKNKTDDDDDAIISDC 148
           RRRLKKENK+TW P++++D++  +  SD 
Sbjct: 80  RRRLKKENKVTWAPRSRSDEEGHSCGSDA 108


>gi|410912202|ref|XP_003969579.1| PREDICTED: iroquois-class homeodomain protein irx-5-like [Takifugu
           rubripes]
          Length = 452

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/93 (73%), Positives = 81/93 (87%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 109 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 168

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDD 155
           LKKENKMTW P+N+++D+++    D ++ D D+
Sbjct: 169 LKKENKMTWTPRNRSEDEEEDENIDLEKNDDDE 201


>gi|432908324|ref|XP_004077811.1| PREDICTED: iroquois-class homeodomain protein irx-1-like [Oryzias
           latipes]
          Length = 498

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/87 (75%), Positives = 73/87 (83%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   AR KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 112 YGDPARPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 171

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD 149
           LKKENK+TW  ++K D +D  +    D
Sbjct: 172 LKKENKVTWGSRSKEDGEDGNLFGSGD 198


>gi|7576708|gb|AAF63956.1|AF165986_1 iroquois-class homeobox protein Irx6 [Mus musculus]
          Length = 498

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 113 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 172

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 173 NKMTWAPRNKS 183


>gi|119913432|ref|XP_001251877.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Bos taurus]
          Length = 458

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 126 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 185

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 186 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 229


>gi|118343848|ref|NP_001071746.1| transcription factor protein [Ciona intestinalis]
 gi|70570005|dbj|BAE06519.1| transcription factor protein [Ciona intestinalis]
          Length = 567

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/79 (82%), Positives = 72/79 (91%), Gaps = 1/79 (1%)

Query: 59  YGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           YG  G    ARRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAII+KMTLTQVSTWFA
Sbjct: 136 YGPMGLSDGARRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIISKMTLTQVSTWFA 195

Query: 118 NARRRLKKENKMTWEPKNK 136
           NARRRLKKEN+MTW P+N+
Sbjct: 196 NARRRLKKENRMTWSPRNR 214


>gi|431900719|gb|ELK08163.1| Iroquois-class homeodomain protein IRX-4 [Pteropus alecto]
          Length = 524

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 70/77 (90%)

Query: 64  DLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL
Sbjct: 144 DSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 203

Query: 124 KKENKMTWEPKNKTDDD 140
           KKENKMTW P+NK  D+
Sbjct: 204 KKENKMTWPPRNKCVDE 220


>gi|410983539|ref|XP_003998096.1| PREDICTED: iroquois-class homeodomain protein IRX-5 [Felis catus]
          Length = 294

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 107 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 166

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 167 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 206


>gi|395839556|ref|XP_003792654.1| PREDICTED: iroquois-class homeodomain protein IRX-3 [Otolemur
           garnettii]
          Length = 620

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 65/77 (84%), Positives = 74/77 (96%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 249 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 308

Query: 127 NKMTWEPKNKTDDDDDA 143
           NKMTW P+++TD++ +A
Sbjct: 309 NKMTWAPRSRTDEEGNA 325


>gi|426382200|ref|XP_004057701.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-3 [Gorilla gorilla gorilla]
          Length = 945

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 65/77 (84%), Positives = 74/77 (96%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 573 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 632

Query: 127 NKMTWEPKNKTDDDDDA 143
           NKMTW P+++TD++ +A
Sbjct: 633 NKMTWAPRSRTDEEGNA 649


>gi|395859499|ref|XP_003802076.1| PREDICTED: iroquois-class homeodomain protein IRX-2 [Otolemur
           garnettii]
          Length = 447

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 116 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 175

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 176 NKMTWAPRNKS 186


>gi|51479177|ref|NP_077313.3| iroquois-class homeodomain protein IRX-1 [Homo sapiens]
 gi|47117873|sp|P78414.3|IRX1_HUMAN RecName: Full=Iroquois-class homeodomain protein IRX-1; AltName:
           Full=Homeodomain protein IRXA1; AltName: Full=Iroquois
           homeobox protein 1
 gi|33356595|gb|AAQ16544.1| homeodomain protein IRXA1 [Homo sapiens]
 gi|33356613|gb|AAQ16553.1| homeodomain protein IRXA1 [Homo sapiens]
 gi|187252483|gb|AAI66635.1| Iroquois homeobox 1 [synthetic construct]
          Length = 480

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 125 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 185 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 228


>gi|47216631|emb|CAG05432.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 110

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/84 (80%), Positives = 74/84 (88%), Gaps = 1/84 (1%)

Query: 58  RYG-AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG   ++  ARRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 22  RYGTVDFNSTARRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 81

Query: 117 ANARRRLKKENKMTWEPKNKTDDD 140
           ANARRRLKKENKMTW PKNK  +D
Sbjct: 82  ANARRRLKKENKMTWSPKNKAGED 105


>gi|345308158|ref|XP_001511678.2| PREDICTED: iroquois-class homeodomain protein IRX-1-like, partial
           [Ornithorhynchus anatinus]
          Length = 390

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 19  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 78

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 79  LKKENKVTWGARSKDQEDGHLFGSDNEGDPEKAEDDEEIDLESI 122


>gi|114598912|ref|XP_001175374.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Pan
           troglodytes]
          Length = 502

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 147 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 206

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 207 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 250


>gi|46395476|ref|NP_997067.1| iroquois-class homeodomain protein IRX-1 isoform 1 [Danio rerio]
 gi|14582906|gb|AAK69709.1| iroquois homeobox protein Ziro1 [Danio rerio]
          Length = 426

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/102 (70%), Positives = 84/102 (82%), Gaps = 5/102 (4%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   AR KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 112 YGDPARPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 171

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEE 161
           LKKENK+TW  ++K  DD++   SD +   EK++D+  +D E
Sbjct: 172 LKKENKVTWGARSK--DDENIFGSDNEGDAEKNEDEEEIDLE 211


>gi|119628541|gb|EAX08136.1| iroquois homeobox protein 2 [Homo sapiens]
          Length = 358

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 116 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 175

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 176 NKMTWAPRNKS 186


>gi|355758834|gb|EHH61528.1| hypothetical protein EGM_19401, partial [Macaca fascicularis]
          Length = 325

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 57  RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 115

Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
           NARRRLKKENKMTW P+NK  D+
Sbjct: 116 NARRRLKKENKMTWPPRNKCTDE 138


>gi|402871109|ref|XP_003899527.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-1 [Papio anubis]
          Length = 477

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 122 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 181

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 182 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 225


>gi|190340076|gb|AAI63896.1| Iroquois homeobox protein 1, a [Danio rerio]
          Length = 426

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/102 (70%), Positives = 84/102 (82%), Gaps = 5/102 (4%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   AR KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 112 YGDPARPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 171

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEE 161
           LKKENK+TW  ++K  DD++   SD +   EK++D+  +D E
Sbjct: 172 LKKENKVTWGARSK--DDENIFGSDNEGDAEKNEDEEEIDLE 211


>gi|301781210|ref|XP_002926021.1| PREDICTED: iroquois-class homeodomain protein IRX-2-like
           [Ailuropoda melanoleuca]
          Length = 462

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 158 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 217

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 218 NKMTWAPRNKS 228


>gi|395510790|ref|XP_003759653.1| PREDICTED: iroquois-class homeodomain protein irx-1-A-like
           [Sarcophilus harrisii]
          Length = 422

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 82/104 (78%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 74  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 133

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D +   SD +   EK +DD  +D E +
Sbjct: 134 LKKENKVTWGARSKDQEDGNLFGSDNEGDPEKTEDDEEIDLESI 177


>gi|240960559|ref|XP_002400561.1| Iroquois-class homeobox protein IRX, putative [Ixodes scapularis]
 gi|215490703|gb|EEC00346.1| Iroquois-class homeobox protein IRX, putative [Ixodes scapularis]
          Length = 137

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/79 (84%), Positives = 73/79 (92%), Gaps = 1/79 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   +  ARRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 37  RYGMDLN-GARRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 95

Query: 118 NARRRLKKENKMTWEPKNK 136
           NARRRLKKENKMTW P+N+
Sbjct: 96  NARRRLKKENKMTWSPRNR 114


>gi|410907802|ref|XP_003967380.1| PREDICTED: iroquois-class homeodomain protein irx-5-like [Takifugu
           rubripes]
          Length = 404

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/94 (72%), Positives = 84/94 (89%), Gaps = 2/94 (2%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 128
           RKNATR++TATLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
Sbjct: 110 RKNATRDATATLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 169

Query: 129 MTWEPKNKTDDDDDAIISDCD--EKDKDDLMMDE 160
           MTW P+N+++D+++    D +  E+D++ L M+E
Sbjct: 170 MTWTPRNRSEDEEEDDNIDLERNEEDEEPLKMNE 203


>gi|291412609|ref|XP_002722571.1| PREDICTED: iroquois homeobox protein 1 [Oryctolagus cuniculus]
          Length = 418

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 63  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 123 LKKENKVTWGSRSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 166


>gi|148679139|gb|EDL11086.1| Iroquois related homeobox 5 (Drosophila) [Mus musculus]
          Length = 630

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 256 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 315

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 316 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 355


>gi|46395472|ref|NP_997068.1| iroquois-class homeodomain protein IRX-1 isoform 2 [Danio rerio]
 gi|21654891|gb|AAK91828.1| iroquois homeobox protein ziro1-a [Danio rerio]
          Length = 419

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/102 (70%), Positives = 84/102 (82%), Gaps = 5/102 (4%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   AR KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 112 YGDPARPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 171

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEE 161
           LKKENK+TW  ++K  DD++   SD +   EK++D+  +D E
Sbjct: 172 LKKENKVTWGARSK--DDENIFGSDNEGDAEKNEDEEEIDLE 211


>gi|395505958|ref|XP_003757303.1| PREDICTED: iroquois-class homeodomain protein IRX-3 [Sarcophilus
           harrisii]
          Length = 926

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 65/77 (84%), Positives = 74/77 (96%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 552 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 611

Query: 127 NKMTWEPKNKTDDDDDA 143
           NKMTW P+++TD++ +A
Sbjct: 612 NKMTWAPRSRTDEEGNA 628


>gi|351708278|gb|EHB11197.1| Iroquois-class homeodomain protein IRX-4, partial [Heterocephalus
           glaber]
          Length = 426

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/107 (67%), Positives = 84/107 (78%), Gaps = 4/107 (3%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 37  RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 95

Query: 118 NARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMK 164
           NARRRLKKENKMTW  +NK  D+     ++ +E D+++    EE +K
Sbjct: 96  NARRRLKKENKMTWPARNKCTDEKRP-YAEGEEADQEE--AGEEPLK 139


>gi|301752874|ref|XP_002912327.1| PREDICTED: iroquois-class homeodomain protein IRX-5-like
           [Ailuropoda melanoleuca]
          Length = 409

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/100 (68%), Positives = 84/100 (84%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 108 YGDPAYRKNATRDTTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 167

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 168 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKQEDK 207


>gi|55153956|gb|AAH85291.1| Irx2 protein [Mus musculus]
          Length = 344

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 117 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 176

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 177 NKMTWAPRNKS 187


>gi|301786448|ref|XP_002928639.1| PREDICTED: iroquois-class homeodomain protein IRX-1-like
           [Ailuropoda melanoleuca]
          Length = 406

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 91  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 150

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 151 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 194


>gi|403282278|ref|XP_003932580.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Saimiri
           boliviensis boliviensis]
          Length = 385

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 63  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 123 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 166


>gi|148705095|gb|EDL37042.1| Iroquois related homeobox 2 (Drosophila) [Mus musculus]
          Length = 390

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 33  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 92

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 93  NKMTWAPRNKS 103


>gi|354498623|ref|XP_003511414.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Cricetulus
           griseus]
          Length = 411

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 56  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 115

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 116 LKKENKVTWGARSKDQEDGVLFGSDTEGDPEKAEDDEEIDLESI 159


>gi|348512344|ref|XP_003443703.1| PREDICTED: iroquois-class homeodomain protein irx-1-like
           [Oreochromis niloticus]
          Length = 453

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/84 (78%), Positives = 74/84 (88%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   AR KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 114 YGDPARPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 173

Query: 123 LKKENKMTWEPKNKTDDDDDAIIS 146
           LKKENK+TW  ++K D+D + + S
Sbjct: 174 LKKENKVTWGSRSKEDEDGNLLGS 197


>gi|194224041|ref|XP_001917663.1| PREDICTED: iroquois-class homeodomain protein IRX-1-like [Equus
           caballus]
          Length = 443

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 87  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 146

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 147 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKTEDDEEIDLESI 190


>gi|355691195|gb|EHH26380.1| Iroquois homeobox protein 1, partial [Macaca mulatta]
          Length = 396

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 41  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 100

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 101 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 144


>gi|343959348|dbj|BAK63531.1| iroquois-class homeodomain protein IRX-2 [Pan troglodytes]
          Length = 378

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 23  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 82

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 83  NKMTWAPRNKS 93


>gi|426243528|ref|XP_004015606.1| PREDICTED: iroquois-class homeodomain protein IRX-5 [Ovis aries]
          Length = 567

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/78 (83%), Positives = 70/78 (89%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTW ANARRR
Sbjct: 182 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWLANARRR 241

Query: 123 LKKENKMTWEPKNKTDDD 140
           LKKENKMTW P+NK  D+
Sbjct: 242 LKKENKMTWPPRNKCADE 259


>gi|149032786|gb|EDL87641.1| rCG42046, isoform CRA_a [Rattus norvegicus]
          Length = 380

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 23  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 82

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 83  NKMTWAPRNKS 93


>gi|402871105|ref|XP_003899526.1| PREDICTED: iroquois-class homeodomain protein IRX-2 [Papio anubis]
          Length = 418

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 63  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 122

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 123 NKMTWAPRNKS 133


>gi|432104637|gb|ELK31249.1| Iroquois-class homeodomain protein IRX-2 [Myotis davidii]
          Length = 262

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 23  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 82

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 83  NKMTWAPRNKS 93


>gi|397473041|ref|XP_003808031.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Pan paniscus]
          Length = 439

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 84  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 143

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 144 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 187


>gi|355749800|gb|EHH54138.1| Iroquois homeobox protein 1, partial [Macaca fascicularis]
          Length = 377

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 41  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 100

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 101 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 144


>gi|291414515|ref|XP_002723505.1| PREDICTED: iroquois homeobox 2, partial [Oryctolagus cuniculus]
          Length = 379

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 115 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 174

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 175 NKMTWAPRNKS 185


>gi|410905115|ref|XP_003966037.1| PREDICTED: iroquois-class homeodomain protein irx-1-like [Takifugu
           rubripes]
          Length = 453

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 67/87 (77%), Positives = 73/87 (83%), Gaps = 1/87 (1%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   AR KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 114 YGDPARPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 173

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD 149
           LKKENKMTW  ++K D +D  +    D
Sbjct: 174 LKKENKMTWGGRSK-DGEDGNLFGSGD 199


>gi|281349025|gb|EFB24609.1| hypothetical protein PANDA_018628 [Ailuropoda melanoleuca]
          Length = 292

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 34  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 93

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 94  LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 137


>gi|20809802|gb|AAH29160.1| IRX1 protein [Homo sapiens]
          Length = 398

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 43  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 102

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 103 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 146


>gi|119628536|gb|EAX08131.1| iroquois homeobox protein 1 [Homo sapiens]
          Length = 389

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 34  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 93

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 94  LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 137


>gi|426385209|ref|XP_004059118.1| PREDICTED: iroquois-class homeodomain protein IRX-2 [Gorilla
           gorilla gorilla]
          Length = 395

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 40  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 99

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 100 NKMTWAPRNKS 110


>gi|291390133|ref|XP_002711614.1| PREDICTED: iroquois homeobox protein 5 [Oryctolagus cuniculus]
          Length = 700

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 70/100 (70%), Positives = 85/100 (85%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 324 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 383

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
           LKKENKMTW P+N+++D+++    D ++ D+D+    E+K
Sbjct: 384 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKAEDK 423


>gi|281342851|gb|EFB18435.1| hypothetical protein PANDA_015615 [Ailuropoda melanoleuca]
          Length = 290

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 35  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 94

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 95  NKMTWAPRNKS 105


>gi|54291725|ref|NP_991261.1| iroquois-class homeodomain protein IRX-4 [Danio rerio]
 gi|41946909|gb|AAH65966.1| Iroquois homeobox protein 4a [Danio rerio]
          Length = 440

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/79 (83%), Positives = 72/79 (91%), Gaps = 1/79 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG+  +   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 131 RYGS-MEGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 189

Query: 118 NARRRLKKENKMTWEPKNK 136
           NARRRLKKENKMTW P+NK
Sbjct: 190 NARRRLKKENKMTWPPRNK 208


>gi|444301783|gb|AGD98928.1| Irx [Nematostella vectensis]
          Length = 451

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 70/103 (67%), Positives = 80/103 (77%), Gaps = 4/103 (3%)

Query: 40  QLCGIDKQVIQVSNLTAVRYGAGYDLAA---RRKNATRESTATLKAWLNEHKKNPYPTKG 96
           +L G D          A R+ +  DLAA   RRKNATRE+T+TLKAWL EH+KNPYPTKG
Sbjct: 121 ELHGFDPHTHPACTRFAERF-SPIDLAAAGARRKNATRETTSTLKAWLFEHRKNPYPTKG 179

Query: 97  EKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDD 139
           EKIMLAI+TKMTLTQVSTWFANARRRLKKENKMTW P+N+  +
Sbjct: 180 EKIMLAILTKMTLTQVSTWFANARRRLKKENKMTWSPRNRCGE 222


>gi|109076671|ref|XP_001084235.1| PREDICTED: iroquois-class homeodomain protein IRX-2-like [Macaca
           mulatta]
          Length = 453

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 68/88 (77%), Positives = 77/88 (87%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 98  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 157

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKD 154
           NKMTW P+NK++D+D+        KD+ 
Sbjct: 158 NKMTWAPRNKSEDEDEDEGDAARSKDES 185


>gi|57164996|gb|AAW34337.1| Iroquois 4a protein [Danio rerio]
          Length = 438

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/79 (83%), Positives = 72/79 (91%), Gaps = 1/79 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG+  +   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 131 RYGS-MEGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 189

Query: 118 NARRRLKKENKMTWEPKNK 136
           NARRRLKKENKMTW P+NK
Sbjct: 190 NARRRLKKENKMTWPPRNK 208


>gi|50418124|gb|AAH77101.1| Iroquois homeobox protein 1, b [Danio rerio]
          Length = 445

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 70/101 (69%), Positives = 80/101 (79%), Gaps = 3/101 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   AR K+ATRE+T+TLKAWL EHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 115 YGDPARAKSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 174

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKM 163
           LKKENK+TW    ++ +D D  I D D +D  D   DEE++
Sbjct: 175 LKKENKVTW---GRSAEDRDGRIFDSDNEDDADKNDDEEEI 212


>gi|348552680|ref|XP_003462155.1| PREDICTED: iroquois-class homeodomain protein IRX-2-like [Cavia
           porcellus]
          Length = 471

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 67/88 (76%), Positives = 76/88 (86%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 115 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 174

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKD 154
           NKMTW P+NK++D+D+        KD+ 
Sbjct: 175 NKMTWAPRNKSEDEDEEDGDAARSKDQS 202


>gi|397473043|ref|XP_003846001.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-2 [Pan paniscus]
          Length = 441

 Score =  139 bits (350), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 202 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 261

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 262 NKMTWAPRNKS 272


>gi|5917660|gb|AAD55977.1| iroquois-related homeobox transcription factor IRX3 [Gallus gallus]
          Length = 100

 Score =  139 bits (349), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 64/77 (83%), Positives = 74/77 (96%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 22  SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 81

Query: 127 NKMTWEPKNKTDDDDDA 143
           NKMTW P+++TD++ ++
Sbjct: 82  NKMTWAPRSRTDEEGNS 98


>gi|56118566|ref|NP_001008113.1| iroquois-class homeodomain protein irx-2 [Xenopus (Silurana)
           tropicalis]
 gi|82181198|sp|Q66IK1.1|IRX2_XENTR RecName: Full=Iroquois-class homeodomain protein irx-2; AltName:
           Full=Iroquois homeobox protein 2
 gi|51704169|gb|AAH81317.1| iroquois homeobox 2 [Xenopus (Silurana) tropicalis]
          Length = 456

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 67/102 (65%), Positives = 77/102 (75%), Gaps = 13/102 (12%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 112 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 171

Query: 127 NKMTWEPKNKTD-------------DDDDAIISDCDEKDKDD 155
           NKMTW P+NK++             ++      DC+E   +D
Sbjct: 172 NKMTWAPRNKSEDEDDDEGDGERVKEEQSEKAQDCNETSAED 213


>gi|20530591|gb|AAM27167.1|AF414134_1 iroquois 1 [Danio rerio]
          Length = 419

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 70/101 (69%), Positives = 80/101 (79%), Gaps = 3/101 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   AR K+ATRE+T+TLKAWL EHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 89  YGDPARAKSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 148

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKM 163
           LKKENK+TW    ++ +D D  I D D +D  D   DEE++
Sbjct: 149 LKKENKVTW---GRSAEDRDGRIFDSDNEDDADKNDDEEEI 186


>gi|126320810|ref|XP_001363462.1| PREDICTED: iroquois-class homeodomain protein irx-2-like
           [Monodelphis domestica]
          Length = 466

 Score =  139 bits (349), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 67/89 (75%), Positives = 76/89 (85%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 113 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 172

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDD 155
           NKMTW P+NK++D+D+        KD+  
Sbjct: 173 NKMTWAPRNKSEDEDEDEGDGARSKDESS 201


>gi|440907266|gb|ELR57429.1| Iroquois-class homeodomain protein IRX-1, partial [Bos grunniens
           mutus]
          Length = 240

 Score =  139 bits (349), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 62  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 121

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 122 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 165


>gi|71896525|ref|NP_001025507.1| iroquois-class homeodomain protein IRX-2 [Gallus gallus]
 gi|6018441|emb|CAB57948.1| iroquois homologue 2 [Gallus gallus]
          Length = 477

 Score =  139 bits (349), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 63/71 (88%), Positives = 68/71 (95%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 114 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 173

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 174 NKMTWAPRNKS 184


>gi|224045914|ref|XP_002190460.1| PREDICTED: iroquois-class homeodomain protein irx-2 [Taeniopygia
           guttata]
          Length = 478

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 63/71 (88%), Positives = 68/71 (95%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 114 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 173

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 174 NKMTWAPRNKS 184


>gi|47777300|ref|NP_001001405.1| iroquois homeobox protein 5b [Danio rerio]
 gi|40949906|gb|AAR97576.1| iroquois homeobox protein 5b [Danio rerio]
          Length = 371

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 69/92 (75%), Positives = 81/92 (88%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 107 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 166

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMM 158
           NKMTW P+ +++D+D+    D ++ D+DD  M
Sbjct: 167 NKMTWTPRTRSEDEDEEDSIDLEKNDEDDEPM 198


>gi|41351450|gb|AAH65681.1| Iroquois homeobox protein 2, a [Danio rerio]
          Length = 432

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 82/107 (76%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 106 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 165

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKGH 173
           NKMTW P+NK++D+D+       + ++ D  MD  +       +  H
Sbjct: 166 NKMTWAPRNKSEDEDEDDGDGERKDERTDKNMDNSEASAEDEGISLH 212


>gi|391334726|ref|XP_003741752.1| PREDICTED: uncharacterized protein LOC100903505 [Metaseiulus
           occidentalis]
          Length = 477

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 71/77 (92%), Gaps = 1/77 (1%)

Query: 61  AGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 119
           A  DL  ARRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIIT+MTLTQVSTWFANA
Sbjct: 171 ASMDLNGARRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITRMTLTQVSTWFANA 230

Query: 120 RRRLKKENKMTWEPKNK 136
           RRRLKKENKMTW P+ +
Sbjct: 231 RRRLKKENKMTWSPRTR 247


>gi|57164994|gb|AAW34336.1| Iroquois 2a protein [Danio rerio]
          Length = 432

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 82/107 (76%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 106 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 165

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKGH 173
           NKMTW P+NK++D+D+       + ++ D  MD  +       +  H
Sbjct: 166 NKMTWAPRNKSEDEDEDDGDGERKDERTDKNMDNSEASAEDEGISLH 212


>gi|443701880|gb|ELU00106.1| hypothetical protein CAPTEDRAFT_79780, partial [Capitella teleta]
          Length = 76

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/75 (88%), Positives = 69/75 (92%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RRKNATREST+TLKAWL EH KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN
Sbjct: 1   RRKNATRESTSTLKAWLYEHIKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 60

Query: 128 KMTWEPKNKTDDDDD 142
           KM W P+N+  DDDD
Sbjct: 61  KMQWSPRNRAGDDDD 75


>gi|327281226|ref|XP_003225350.1| PREDICTED: iroquois-class homeodomain protein irx-2-like [Anolis
           carolinensis]
          Length = 490

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/71 (88%), Positives = 68/71 (95%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 119 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 178

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 179 NKMTWAPRNKS 189


>gi|355691192|gb|EHH26377.1| hypothetical protein EGK_16333, partial [Macaca mulatta]
          Length = 223

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 35  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 94

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 95  NKMTWAPRNKS 105


>gi|355749797|gb|EHH54135.1| Iroquois homeobox protein 2, partial [Macaca fascicularis]
          Length = 187

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 33  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 92

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 93  NKMTWAPRNKS 103


>gi|426243530|ref|XP_004015607.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-6 [Ovis aries]
          Length = 486

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 82/117 (70%), Gaps = 13/117 (11%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMT-------L 109
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMT       L
Sbjct: 136 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTSRRSPPAL 195

Query: 110 TQVSTWFANARRRLKKENKMTWEPKNK-----TDDDDDAIISDCDEKDKDDLMMDEE 161
           TQVSTWFANARRRLKKENKMTW PKNK      ++     +  C   D  D+   +E
Sbjct: 196 TQVSTWFANARRRLKKENKMTWAPKNKGGEERKEEGGTEELLGCLNGDTKDVTAGQE 252


>gi|348512459|ref|XP_003443760.1| PREDICTED: iroquois-class homeodomain protein irx-2-like
           [Oreochromis niloticus]
          Length = 567

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/89 (76%), Positives = 75/89 (84%), Gaps = 5/89 (5%)

Query: 54  LTAVRYGA-GYDL----AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMT 108
           L+   YG+ GY       A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMT
Sbjct: 95  LSYPPYGSPGYPFQLNDPAYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMT 154

Query: 109 LTQVSTWFANARRRLKKENKMTWEPKNKT 137
           LTQVSTWFANARRRLKKENKMTW P+NK+
Sbjct: 155 LTQVSTWFANARRRLKKENKMTWAPRNKS 183


>gi|148231851|ref|NP_001079235.1| iroquois-class homeodomain protein irx-2 [Xenopus laevis]
 gi|82182283|sp|Q6DCQ1.1|IRX2_XENLA RecName: Full=Iroquois-class homeodomain protein irx-2;
           Short=Irx2-A; AltName: Full=Iroquois homeobox protein 2;
           Short=Xiro2
 gi|50418016|gb|AAH77951.1| Irx2-A protein [Xenopus laevis]
          Length = 455

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/71 (88%), Positives = 68/71 (95%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 112 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 171

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 172 NKMTWAPRNKS 182


>gi|395510782|ref|XP_003759649.1| PREDICTED: iroquois-class homeodomain protein irx-2-like
           [Sarcophilus harrisii]
          Length = 466

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/71 (88%), Positives = 68/71 (95%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 113 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 172

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 173 NKMTWAPRNKS 183


>gi|432908924|ref|XP_004078065.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           irx-2-like, partial [Oryzias latipes]
          Length = 478

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 63/71 (88%), Positives = 68/71 (95%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 113 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 172

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 173 NKMTWAPRNKS 183


>gi|417410251|gb|JAA51602.1| Putative transcription factor meis1, partial [Desmodus rotundus]
          Length = 381

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/100 (69%), Positives = 79/100 (79%), Gaps = 3/100 (3%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR+ T TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 30  AYRKNATRDGTGTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 89

Query: 127 NKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           NK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 90  NKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 129


>gi|358253316|dbj|GAA52801.1| iroquois-class homeodomain protein IRX-6 [Clonorchis sinensis]
          Length = 915

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 69/73 (94%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           ARR+NATRESTATLKAWL EH KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 340 ARRRNATRESTATLKAWLQEHIKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 399

Query: 127 NKMTWEPKNKTDD 139
           NKMTW PK++ ++
Sbjct: 400 NKMTWTPKHRGEE 412


>gi|410949849|ref|XP_003981629.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Felis catus]
          Length = 165

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 37  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 96

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 97  LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 140


>gi|358253695|dbj|GAA53611.1| iroquois-class homeodomain protein IRX-4 [Clonorchis sinensis]
          Length = 638

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 68/80 (85%), Gaps = 1/80 (1%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           +G G D   RRKNATREST TLK WL EH KNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 249 FGYGLD-GTRRKNATRESTTTLKVWLQEHIKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 307

Query: 119 ARRRLKKENKMTWEPKNKTD 138
           ARRRLKKENKMTW PK  T+
Sbjct: 308 ARRRLKKENKMTWPPKTNTN 327


>gi|364087493|gb|AEW46997.1| iroquois homeobox 6 [Callorhinchus milii]
          Length = 479

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/79 (81%), Positives = 71/79 (89%), Gaps = 1/79 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG   ++ + RRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 146 RYGTMDFNGSTRRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 205

Query: 117 ANARRRLKKENKMTWEPKN 135
           ANARRRLKKENKMTW P+N
Sbjct: 206 ANARRRLKKENKMTWSPRN 224


>gi|41055006|ref|NP_957351.1| iroquois-class homeodomain protein IRX-2 [Danio rerio]
 gi|33604051|gb|AAH56322.1| Iroquois homeobox protein 2, a [Danio rerio]
          Length = 432

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/107 (63%), Positives = 82/107 (76%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKG+KIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 106 AYRKNATRDATATLKAWLQEHRKNPYPTKGQKIMLAIITKMTLTQVSTWFANARRRLKKE 165

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKGH 173
           NKMTW P+NK++D+D+       + ++ D  MD  +       +  H
Sbjct: 166 NKMTWAPRNKSEDEDEDDGDGERKDERTDKNMDNSEASAEDEGISLH 212


>gi|431900718|gb|ELK08162.1| Iroquois-class homeodomain protein IRX-2 [Pteropus alecto]
          Length = 141

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 23  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 82

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 83  NKMTWAPRNKS 93


>gi|403282282|ref|XP_003932582.1| PREDICTED: iroquois-class homeodomain protein IRX-2 [Saimiri
           boliviensis boliviensis]
          Length = 251

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 86  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 145

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 146 NKMTWAPRNKS 156


>gi|190338841|gb|AAI62635.1| Irx5b protein [Danio rerio]
          Length = 371

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/92 (73%), Positives = 81/92 (88%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 107 AYRKNATRDATATLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 166

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMM 158
           NKMTW P+ +++D+D+    D ++ D+DD  M
Sbjct: 167 NKMTWTPRTRSEDEDEEDSIDLEKNDEDDEPM 198


>gi|169642051|gb|AAI60654.1| Irx5b protein [Danio rerio]
          Length = 371

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 68/92 (73%), Positives = 81/92 (88%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 107 AYRKNATRDATATLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 166

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMM 158
           NKMTW P+ +++D+D+    D ++ D+DD  M
Sbjct: 167 NKMTWTPRTRSEDEDEEDSIDLEKNDEDDEPM 198


>gi|198438134|ref|XP_002124771.1| PREDICTED: similar to transcription factor protein [Ciona
           intestinalis]
          Length = 638

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 63/74 (85%), Positives = 70/74 (94%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           + RK+ATREST TLKAWL EHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 71  SHRKSATRESTNTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 130

Query: 127 NKMTWEPKNKTDDD 140
           NKMTW PKN+++++
Sbjct: 131 NKMTWVPKNRSNEN 144


>gi|322366536|gb|ADW95342.1| IrxA [Paracentrotus lividus]
          Length = 602

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 67/82 (81%), Positives = 73/82 (89%), Gaps = 1/82 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYG   +  ARRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 138 RYGMDLN-GARRKNATRETTSTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 196

Query: 118 NARRRLKKENKMTWEPKNKTDD 139
           NARRRLKKENKMTW P+N+  D
Sbjct: 197 NARRRLKKENKMTWSPRNRCGD 218


>gi|410905169|ref|XP_003966064.1| PREDICTED: iroquois-class homeodomain protein irx-2-like [Takifugu
           rubripes]
          Length = 503

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 65/80 (81%), Positives = 70/80 (87%), Gaps = 2/80 (2%)

Query: 60  GAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           G  Y L   A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 104 GYSYQLNDPAYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 163

Query: 118 NARRRLKKENKMTWEPKNKT 137
           NARRRLKKENKMTW P+ K+
Sbjct: 164 NARRRLKKENKMTWAPRTKS 183


>gi|345308160|ref|XP_001512003.2| PREDICTED: iroquois-class homeodomain protein irx-2-like
           [Ornithorhynchus anatinus]
          Length = 696

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 63/71 (88%), Positives = 68/71 (95%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 358 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 417

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 418 NKMTWAPRNKS 428


>gi|351708280|gb|EHB11199.1| Iroquois-class homeodomain protein IRX-2 [Heterocephalus glaber]
          Length = 262

 Score =  135 bits (340), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 62/71 (87%), Positives = 68/71 (95%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNP+PTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 145 AYRKNATRDATATLKAWLQEHRKNPFPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 204

Query: 127 NKMTWEPKNKT 137
           NKMTW P+NK+
Sbjct: 205 NKMTWAPRNKS 215


>gi|410932459|ref|XP_003979611.1| PREDICTED: iroquois-class homeodomain protein irx-2-like, partial
           [Takifugu rubripes]
          Length = 458

 Score =  135 bits (340), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 62/71 (87%), Positives = 67/71 (94%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 113 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 172

Query: 127 NKMTWEPKNKT 137
           NKMTW P+ K+
Sbjct: 173 NKMTWAPRTKS 183


>gi|355756778|gb|EHH60386.1| hypothetical protein EGM_11738, partial [Macaca fascicularis]
          Length = 138

 Score =  135 bits (340), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 66/83 (79%), Positives = 75/83 (90%), Gaps = 3/83 (3%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 18  SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 77

Query: 127 N---KMTWEPKNKTDDDDDAIIS 146
           N   KMTW P+++TD++ +A  S
Sbjct: 78  NKMTKMTWAPRSRTDEEGNAYGS 100


>gi|193788691|ref|NP_001123285.1| iroquois homeobox A [Strongylocentrotus purpuratus]
 gi|167859058|gb|ACA04464.1| IrxA [Strongylocentrotus purpuratus]
          Length = 605

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 67/79 (84%), Positives = 72/79 (91%), Gaps = 1/79 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 138 GMDLNGARRKNATRETTSTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 197

Query: 121 RRLKKENKMTWEPKNKTDD 139
           RRLKKENKMTW P+N+  D
Sbjct: 198 RRLKKENKMTWSPRNRCGD 216


>gi|410932443|ref|XP_003979603.1| PREDICTED: iroquois-class homeodomain protein irx-2-like, partial
           [Takifugu rubripes]
          Length = 215

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/80 (81%), Positives = 70/80 (87%), Gaps = 2/80 (2%)

Query: 60  GAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           G  Y L   A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 104 GYSYQLNDPAYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 163

Query: 118 NARRRLKKENKMTWEPKNKT 137
           NARRRLKKENKMTW P+ K+
Sbjct: 164 NARRRLKKENKMTWAPRTKS 183


>gi|345796330|ref|XP_003434155.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Canis lupus
           familiaris]
          Length = 650

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 300 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 359

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
           LKKENK+TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 360 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 403


>gi|256080187|ref|XP_002576364.1| iroquois homeobox family transcription factor [Schistosoma mansoni]
 gi|353232492|emb|CCD79847.1| iroquois homeobox family transcription factor [Schistosoma mansoni]
          Length = 629

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/103 (64%), Positives = 79/103 (76%), Gaps = 3/103 (2%)

Query: 57  VRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           + Y   +    RR+NAT+EST TLKAWL EH KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 315 IGYSNEFANTTRRRNATKESTTTLKAWLQEHIKNPYPTKGEKIMLAIITKMTLTQVSTWF 374

Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAII--SDCDEKDKDDLM 157
           ANARRRLKKENKMTW PK++ D  +  ++  S+C+  +  D +
Sbjct: 375 ANARRRLKKENKMTWTPKHR-DKAESKLVNSSECNLSNWTDTI 416


>gi|410949851|ref|XP_003981630.1| PREDICTED: uncharacterized protein LOC101100623 [Felis catus]
          Length = 419

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/68 (91%), Positives = 66/68 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 258 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 317

Query: 127 NKMTWEPK 134
           NKMTW P+
Sbjct: 318 NKMTWAPR 325


>gi|443701875|gb|ELU00101.1| hypothetical protein CAPTEDRAFT_88378, partial [Capitella teleta]
          Length = 76

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 63/76 (82%), Positives = 68/76 (89%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           +    D  ARRKNATREST TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 1   FSFALDPNARRKNATRESTTTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 60

Query: 119 ARRRLKKENKMTWEPK 134
           ARRRLKK+NK+TW P+
Sbjct: 61  ARRRLKKDNKVTWSPR 76


>gi|18858901|ref|NP_571898.1| iroquois homeobox protein 1, b [Danio rerio]
 gi|14764399|gb|AAK08650.1| iroquois homeobox protein Ziro1 [Danio rerio]
          Length = 445

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 79/101 (78%), Gaps = 3/101 (2%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   AR K+ATRE+T+TLKAWL EHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 115 YGDPARAKSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 174

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKM 163
           LKKENK+T     ++ +D D  I D D +D  D   DEE++
Sbjct: 175 LKKENKVTC---CRSAEDRDGRIFDSDNEDDADKNDDEEEI 212


>gi|12659126|gb|AAK01199.1|AF319964_1 iroquois-related homeobox transcription factor [Gallus gallus]
          Length = 76

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/74 (86%), Positives = 69/74 (93%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 3   YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 62

Query: 123 LKKENKMTWEPKNK 136
           LKKENKMTW P+N+
Sbjct: 63  LKKENKMTWTPRNR 76


>gi|156386691|ref|XP_001634045.1| predicted protein [Nematostella vectensis]
 gi|156221123|gb|EDO41982.1| predicted protein [Nematostella vectensis]
          Length = 70

 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 68/70 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           ARRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAI+TKMTLTQVSTWFANARRRLKKE
Sbjct: 1   ARRKNATRETTSTLKAWLFEHRKNPYPTKGEKIMLAILTKMTLTQVSTWFANARRRLKKE 60

Query: 127 NKMTWEPKNK 136
           NKMTW P+N+
Sbjct: 61  NKMTWSPRNR 70


>gi|323816868|gb|ADY06420.1| iroquois C [Lethenteron camtschaticum]
          Length = 235

 Score =  132 bits (333), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 63/78 (80%), Positives = 69/78 (88%)

Query: 60  GAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 119
           G G    A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIIT+MTLTQVSTWFANA
Sbjct: 14  GNGVAEPALRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITRMTLTQVSTWFANA 73

Query: 120 RRRLKKENKMTWEPKNKT 137
           RRRLKKENKMTW  K ++
Sbjct: 74  RRRLKKENKMTWVTKARS 91


>gi|12659122|gb|AAK01197.1|AF319962_1 iroquois-related homeobox transcription factor [Gallus gallus]
          Length = 78

 Score =  132 bits (331), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 63/70 (90%), Positives = 67/70 (95%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 9   AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 68

Query: 127 NKMTWEPKNK 136
           NKMTW P+NK
Sbjct: 69  NKMTWAPRNK 78


>gi|296194976|ref|XP_002806677.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-1 [Callithrix jacchus]
          Length = 462

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 61/69 (88%), Positives = 64/69 (92%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 125 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184

Query: 123 LKKENKMTW 131
           LKKENK+TW
Sbjct: 185 LKKENKVTW 193


>gi|221104313|ref|XP_002166749.1| PREDICTED: uncharacterized protein LOC100211771 [Hydra
           magnipapillata]
          Length = 463

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 57/73 (78%), Positives = 69/73 (94%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           +ARRKNAT+E+T+ LK+WLNEH+KNPYP+K EK+MLAI+TKMTLTQVSTWFANARRRLKK
Sbjct: 134 SARRKNATKETTSVLKSWLNEHRKNPYPSKSEKVMLAIMTKMTLTQVSTWFANARRRLKK 193

Query: 126 ENKMTWEPKNKTD 138
           ENKMTW P+ K++
Sbjct: 194 ENKMTWSPRKKSN 206


>gi|449139031|gb|AGE89846.1| mirror, partial [Ceratitis capitata]
          Length = 80

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/70 (92%), Positives = 67/70 (95%), Gaps = 1/70 (1%)

Query: 62  GYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           G DL  ARRKNATRE+T+TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
Sbjct: 11  GVDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 70

Query: 121 RRLKKENKMT 130
           RRLKKENKMT
Sbjct: 71  RRLKKENKMT 80


>gi|2765436|emb|CAA75232.1| Iroquois homeobox protein 2 [Mus musculus]
          Length = 77

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/68 (91%), Positives = 66/68 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 9   AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 68

Query: 127 NKMTWEPK 134
           NKMTW P+
Sbjct: 69  NKMTWAPR 76


>gi|405957775|gb|EKC23960.1| Iroquois-class homeodomain protein IRX-6 [Crassostrea gigas]
          Length = 437

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/100 (67%), Positives = 80/100 (80%), Gaps = 5/100 (5%)

Query: 59  YGA---GYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           YGA   G DL  AARRKNATRE+T+ LKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 117 YGAFYGGLDLNNAARRKNATRETTSALKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVS 176

Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDK 153
           TWFANARRRLKKE+K+ ++ ++    D ++I S  +  D+
Sbjct: 177 TWFANARRRLKKESKLGYKERDIDGSDVESIGSPAETDDE 216


>gi|291190916|ref|NP_001167421.1| Iroquois-class homeodomain protein IRX-1 [Salmo salar]
 gi|223648794|gb|ACN11155.1| Iroquois-class homeodomain protein IRX-1 [Salmo salar]
          Length = 457

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/92 (69%), Positives = 73/92 (79%), Gaps = 3/92 (3%)

Query: 62  GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 121
           GY    R K ATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARR
Sbjct: 110 GYGDPNRAKAATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 169

Query: 122 RLKKENKMTWEPKNKTDDDDDAIISDCDEKDK 153
           RLKKENK+TW    ++ +D D  I   D +D+
Sbjct: 170 RLKKENKVTW---GRSAEDRDGRIFSSDNEDE 198


>gi|348512673|ref|XP_003443867.1| PREDICTED: iroquois-class homeodomain protein irx-1-A-like
           [Oreochromis niloticus]
          Length = 462

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/93 (66%), Positives = 74/93 (79%), Gaps = 3/93 (3%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   +R K ATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIIT+MTLTQVSTWFANARRR
Sbjct: 112 YGDPSRAKTATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRR 171

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDD 155
           LKKENK+TW    ++ +D D  I   D +D+ +
Sbjct: 172 LKKENKVTW---GRSAEDRDGRIFSSDNEDEHE 201


>gi|6006472|emb|CAB56833.1| iroquois homologue-3 homeodomain [Gallus gallus]
          Length = 69

 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/68 (91%), Positives = 65/68 (95%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R KNATREST TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 2   SRPKNATRESTGTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 61

Query: 127 NKMTWEPK 134
           NKMTW P+
Sbjct: 62  NKMTWAPR 69


>gi|449282430|gb|EMC89263.1| Iroquois-class homeodomain protein irx-3, partial [Columba livia]
          Length = 67

 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN
Sbjct: 1   RPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 60

Query: 128 KMTWEPK 134
           KMTW P+
Sbjct: 61  KMTWAPR 67


>gi|449282432|gb|EMC89265.1| Iroquois-class homeodomain protein IRX-5, partial [Columba livia]
          Length = 66

 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 61/66 (92%), Positives = 65/66 (98%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 128
           RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
Sbjct: 1   RKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 60

Query: 129 MTWEPK 134
           MTW P+
Sbjct: 61  MTWTPR 66


>gi|323816812|gb|ADY06419.1| iroquois A [Lethenteron camtschaticum]
          Length = 180

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 60/78 (76%), Positives = 70/78 (89%)

Query: 70  KNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM 129
           KNATREST TLKAWLNEH+KNP PTKGEKIMLAIITKMTLTQVSTWFANARRRL+KENK+
Sbjct: 2   KNATRESTTTLKAWLNEHRKNPVPTKGEKIMLAIITKMTLTQVSTWFANARRRLRKENKV 61

Query: 130 TWEPKNKTDDDDDAIISD 147
           TW  ++++D++  +  SD
Sbjct: 62  TWASRSRSDEEGHSCGSD 79


>gi|432884296|ref|XP_004074477.1| PREDICTED: iroquois-class homeodomain protein irx-1-like [Oryzias
           latipes]
          Length = 451

 Score =  129 bits (324), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 62/93 (66%), Positives = 74/93 (79%), Gaps = 3/93 (3%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   +R K ATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIIT+MTLTQVSTWFANARRR
Sbjct: 109 YGDPSRAKTATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRR 168

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDD 155
           LKKENK+TW    ++ +D D  I   D +D+ +
Sbjct: 169 LKKENKVTW---GRSAEDRDGRIFSSDNEDEHE 198


>gi|410911152|ref|XP_003969054.1| PREDICTED: iroquois-class homeodomain protein irx-1-like [Takifugu
           rubripes]
          Length = 443

 Score =  129 bits (323), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 73/91 (80%), Gaps = 3/91 (3%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   +R K ATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIIT+MTLTQVSTWFANARRR
Sbjct: 112 YGDPSRAKAATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRR 171

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDK 153
           LKKENK+TW    ++ +D D  I   D +D+
Sbjct: 172 LKKENKVTW---GRSAEDRDGRIFSSDNEDE 199


>gi|449282433|gb|EMC89266.1| Iroquois-class homeodomain protein IRX-4, partial [Columba livia]
          Length = 67

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 64/67 (95%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN
Sbjct: 1   RRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 60

Query: 128 KMTWEPK 134
           KMTW PK
Sbjct: 61  KMTWSPK 67


>gi|358341617|dbj|GAA49245.1| tolloid-like protein 1, partial [Clonorchis sinensis]
          Length = 2104

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 2/84 (2%)

Query: 60   GAGYDLA--ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
            G  ++L+  +RRKNATRE+T+ LKAWLNEH+KNPYPTKGEKIMLAI+TKM+LTQVSTWFA
Sbjct: 1644 GCTFELSGNSRRKNATRETTSMLKAWLNEHRKNPYPTKGEKIMLAIVTKMSLTQVSTWFA 1703

Query: 118  NARRRLKKENKMTWEPKNKTDDDD 141
            NARRRLKKE+KMTW  +    D D
Sbjct: 1704 NARRRLKKESKMTWGVRTTAPDSD 1727


>gi|47229508|emb|CAF99496.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 453

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 73/91 (80%), Gaps = 3/91 (3%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y   +R K ATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIIT+MTLTQVSTWFANARRR
Sbjct: 112 YGDPSRAKAATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRR 171

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDK 153
           LKKENK+TW    ++ +D D  I   D +D+
Sbjct: 172 LKKENKVTW---GRSAEDRDGRIFSSDNEDE 199


>gi|297487836|ref|XP_002696506.1| PREDICTED: iroquois-class homeodomain protein IRX-2 [Bos taurus]
 gi|296475657|tpg|DAA17772.1| TPA: iroquois homeobox 2-like [Bos taurus]
          Length = 555

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/64 (93%), Positives = 63/64 (98%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 283 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 342

Query: 127 NKMT 130
           NKMT
Sbjct: 343 NKMT 346


>gi|12659132|gb|AAK01202.1| iroquois-related homeobox transcription factor [Homo sapiens]
          Length = 81

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/65 (93%), Positives = 64/65 (98%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 16  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 75

Query: 127 NKMTW 131
           NKMTW
Sbjct: 76  NKMTW 80


>gi|2765440|emb|CAA75234.1| Iroquois homeobox protein 1 [Mus musculus]
          Length = 74

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/74 (83%), Positives = 67/74 (90%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 1   YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 60

Query: 123 LKKENKMTWEPKNK 136
           LKKENK+TW  ++K
Sbjct: 61  LKKENKVTWGARSK 74


>gi|326917275|ref|XP_003204926.1| PREDICTED: iroquois-class homeodomain protein IRX-4-like [Meleagris
           gallopavo]
          Length = 319

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/71 (87%), Positives = 65/71 (91%), Gaps = 1/71 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           RYGA  D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGA-MDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193

Query: 118 NARRRLKKENK 128
           NARRRLKKENK
Sbjct: 194 NARRRLKKENK 204


>gi|405968593|gb|EKC33653.1| Iroquois-class homeodomain protein IRX-6 [Crassostrea gigas]
          Length = 505

 Score =  126 bits (317), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/101 (62%), Positives = 77/101 (76%), Gaps = 3/101 (2%)

Query: 33  PALQSRRQLCGIDKQV-IQVSNLTAVRYGAGYDL-AARRKNATRESTATLKAWLNEHKKN 90
           P+L +   +  +D  +  QV N   ++Y +G+D+   RRKNATRE+TA LKAWL EH KN
Sbjct: 143 PSLVTASSVNNLDTVLRSQVYNYMNMQY-SGFDMNGGRRKNATRETTAPLKAWLKEHMKN 201

Query: 91  PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 131
           PYPTK EK+MLAI+TKMTLTQ+STWFANARRRLKKENK  W
Sbjct: 202 PYPTKAEKVMLAIVTKMTLTQISTWFANARRRLKKENKGEW 242


>gi|12659124|gb|AAK01198.1|AF319963_1 iroquois-related homeobox transcription factor [Gallus gallus]
          Length = 75

 Score =  126 bits (317), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/69 (88%), Positives = 64/69 (92%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 4   YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 63

Query: 123 LKKENKMTW 131
           LKKENK+TW
Sbjct: 64  LKKENKVTW 72


>gi|56694850|gb|AAW23087.1| Irx-c [Oikopleura dioica]
          Length = 318

 Score =  126 bits (316), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/135 (53%), Positives = 87/135 (64%), Gaps = 13/135 (9%)

Query: 33  PALQSRRQLCGIDKQVIQ----VSNLTAVRYGAGYDL--AARRKNATRESTATLKAWLNE 86
           PAL +R QL     ++ Q    +  + A +YG    L  A  RKNATRESTA LK WL E
Sbjct: 105 PALIARAQLTSQLPRLPQLPQVIDPMLAAQYGYSQLLHGAGARKNATRESTAPLKNWLKE 164

Query: 87  HKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIIS 146
           H+KNPYPTKGEK+ LA+I+ MTLTQVSTWFANARRRLKKENK  W P +  +DDD +   
Sbjct: 165 HQKNPYPTKGEKVYLALISGMTLTQVSTWFANARRRLKKENK--WSPSSGFEDDDSST-- 220

Query: 147 DCDEKDKDDLMMDEE 161
                +K   + DEE
Sbjct: 221 ---SPNKPSSVTDEE 232


>gi|313216211|emb|CBY37561.1| unnamed protein product [Oikopleura dioica]
          Length = 256

 Score =  126 bits (316), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/114 (57%), Positives = 83/114 (72%), Gaps = 9/114 (7%)

Query: 37  SRRQLCGID-----KQVIQVSNLTAVRYGAGYDLAAR--RKNATRESTATLKAWLNEHKK 89
           S R+ C ID       V QV+ + A +YG    + A+  RKNATREST  LKAWL +H+K
Sbjct: 46  SERRKCPIDLDKMGMGVPQVNPMMAAQYGYAQLMQAQSTRKNATRESTQQLKAWLKDHQK 105

Query: 90  NPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDA 143
           NPYPTKGEKIMLA+++ M+LTQVSTWFANARRRLKKENK  W P+  ++D+D +
Sbjct: 106 NPYPTKGEKIMLALVSGMSLTQVSTWFANARRRLKKENK--WCPEGGSEDNDGS 157


>gi|56694856|gb|AAW23090.1| Irx-b [Oikopleura dioica]
 gi|313233986|emb|CBY10154.1| unnamed protein product [Oikopleura dioica]
          Length = 256

 Score =  126 bits (316), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/114 (57%), Positives = 83/114 (72%), Gaps = 9/114 (7%)

Query: 37  SRRQLCGID-----KQVIQVSNLTAVRYGAGYDLAAR--RKNATRESTATLKAWLNEHKK 89
           S R+ C ID       V QV+ + A +YG    + A+  RKNATREST  LKAWL +H+K
Sbjct: 46  SERRKCPIDLDKMGMGVPQVNPMMAAQYGYAQLMQAQSTRKNATRESTQQLKAWLKDHQK 105

Query: 90  NPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDA 143
           NPYPTKGEKIMLA+++ M+LTQVSTWFANARRRLKKENK  W P+  ++D+D +
Sbjct: 106 NPYPTKGEKIMLALVSGMSLTQVSTWFANARRRLKKENK--WCPEGGSEDNDGS 157


>gi|313218213|emb|CBY41495.1| unnamed protein product [Oikopleura dioica]
 gi|313229213|emb|CBY23798.1| unnamed protein product [Oikopleura dioica]
          Length = 385

 Score =  125 bits (315), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 72/135 (53%), Positives = 87/135 (64%), Gaps = 13/135 (9%)

Query: 33  PALQSRRQLCGIDKQVIQ----VSNLTAVRYGAGYDL--AARRKNATRESTATLKAWLNE 86
           PAL +R QL     ++ Q    +  + A +YG    L  A  RKNATRESTA LK WL E
Sbjct: 172 PALIARAQLTSQLPRLPQLPQVIDPMLAAQYGYSQLLHGAGARKNATRESTAPLKNWLKE 231

Query: 87  HKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIIS 146
           H+KNPYPTKGEK+ LA+I+ MTLTQVSTWFANARRRLKKENK  W P +  +DDD +   
Sbjct: 232 HQKNPYPTKGEKVYLALISGMTLTQVSTWFANARRRLKKENK--WSPSSGFEDDDSST-- 287

Query: 147 DCDEKDKDDLMMDEE 161
                +K   + DEE
Sbjct: 288 ---SPNKPSSVTDEE 299


>gi|353232800|emb|CCD80156.1| unnamed protein product [Schistosoma mansoni]
          Length = 1084

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 64/78 (82%), Positives = 67/78 (85%), Gaps = 1/78 (1%)

Query: 59  YGAGYDL-AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           +G  Y L   RRKNATREST TLK WL EH KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 623 HGFTYGLDGTRRKNATRESTTTLKVWLQEHMKNPYPTKGEKIMLAIITKMTLTQVSTWFA 682

Query: 118 NARRRLKKENKMTWEPKN 135
           NARRRLKKENKM+W PK+
Sbjct: 683 NARRRLKKENKMSWPPKS 700


>gi|47215232|emb|CAF96730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 304

 Score =  125 bits (314), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 59/64 (92%), Positives = 62/64 (96%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 151 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 210

Query: 127 NKMT 130
           NKMT
Sbjct: 211 NKMT 214


>gi|410900328|ref|XP_003963648.1| PREDICTED: iroquois-class homeodomain protein irx-3-like [Takifugu
           rubripes]
          Length = 322

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/80 (75%), Positives = 66/80 (82%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           R+GA  D     K ATREST  LKAWLNEH KNPYPTKGEKIMLAIITKM+LTQVSTWFA
Sbjct: 102 RHGAVEDAGRVAKVATRESTGALKAWLNEHLKNPYPTKGEKIMLAIITKMSLTQVSTWFA 161

Query: 118 NARRRLKKENKMTWEPKNKT 137
           NARRRLKKEN+++W  K K+
Sbjct: 162 NARRRLKKENRVSWASKGKS 181


>gi|256074829|ref|XP_002573725.1| subfamily M12A unassigned peptidase (M12 family) [Schistosoma
            mansoni]
 gi|360043844|emb|CCD81390.1| putative tolloid [Schistosoma mansoni]
          Length = 2083

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 63/64 (98%)

Query: 68   RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
            RRKNATRE+T+ LK+WLNEH+KNPYPTKGEKIMLA+ITKM+LTQVSTWFANARRRLKKEN
Sbjct: 1723 RRKNATRETTSLLKSWLNEHRKNPYPTKGEKIMLALITKMSLTQVSTWFANARRRLKKEN 1782

Query: 128  KMTW 131
            K+TW
Sbjct: 1783 KVTW 1786


>gi|47229107|emb|CAG03859.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 267

 Score =  123 bits (309), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/79 (75%), Positives = 65/79 (82%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           R+GA  D     K ATREST  LKAWLNEH KNPYPTKGEKIMLAIITKM+LTQVSTWFA
Sbjct: 80  RHGAVEDPGRVAKVATRESTGALKAWLNEHLKNPYPTKGEKIMLAIITKMSLTQVSTWFA 139

Query: 118 NARRRLKKENKMTWEPKNK 136
           NARRRLKKEN+++W  K K
Sbjct: 140 NARRRLKKENRVSWASKGK 158


>gi|12659128|gb|AAK01200.1|AF319965_1 iroquois-related homeobox transcription factor [Gallus gallus]
          Length = 72

 Score =  122 bits (307), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 60/72 (83%), Positives = 65/72 (90%), Gaps = 1/72 (1%)

Query: 59  YG-AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           YG   +  +ARRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 1   YGPVDFTASARRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 60

Query: 118 NARRRLKKENKM 129
           NARRRLKKENKM
Sbjct: 61  NARRRLKKENKM 72


>gi|348502981|ref|XP_003439045.1| PREDICTED: iroquois-class homeodomain protein IRX-1-like
           [Oreochromis niloticus]
          Length = 323

 Score =  122 bits (307), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 60/80 (75%), Positives = 66/80 (82%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           R GA  D +   K ATREST  LKAWLNEH KNPYPTKGEKIMLAIITKM+LTQVSTWFA
Sbjct: 102 RPGAADDPSRVAKVATRESTGALKAWLNEHLKNPYPTKGEKIMLAIITKMSLTQVSTWFA 161

Query: 118 NARRRLKKENKMTWEPKNKT 137
           NARRRLKKEN+++W  K K+
Sbjct: 162 NARRRLKKENRVSWASKGKS 181


>gi|313227537|emb|CBY22684.1| unnamed protein product [Oikopleura dioica]
          Length = 368

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 6/105 (5%)

Query: 56  AVRYGAG--YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
           A RYG+   +     RKNATRE+TA LK WL EH +NPYPTK EKI LAII+ M+LTQVS
Sbjct: 180 AYRYGSAGRFPSNGHRKNATRENTAPLKKWLEEHMRNPYPTKAEKITLAIISSMSLTQVS 239

Query: 114 TWFANARRRLKKENKMTWE-PKNKTDDDD---DAIISDCDEKDKD 154
           TWFANARRRLKKEN++TWE P+  T  D+   + +  + D ++++
Sbjct: 240 TWFANARRRLKKENRVTWETPRETTGSDEHETEELARETDSRNEN 284


>gi|57116080|gb|AAW33556.1| iroquois-complex protein [Schistocerca americana]
          Length = 100

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/64 (98%), Positives = 64/64 (100%)

Query: 84  LNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDA 143
           LNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDA
Sbjct: 1   LNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDA 60

Query: 144 IISD 147
           I+SD
Sbjct: 61  IVSD 64


>gi|432959640|ref|XP_004086342.1| PREDICTED: iroquois-class homeodomain protein IRX-1-like [Oryzias
           latipes]
          Length = 245

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 63/79 (79%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           R G   D     K ATREST  LKAWLNEH KNPYPTKGEKIMLAIITKM+LTQVSTWFA
Sbjct: 32  RPGGAEDPGRVAKVATRESTGALKAWLNEHLKNPYPTKGEKIMLAIITKMSLTQVSTWFA 91

Query: 118 NARRRLKKENKMTWEPKNK 136
           NARRRLKKEN+++W  + K
Sbjct: 92  NARRRLKKENRVSWASRGK 110


>gi|56694858|gb|AAW23091.1| Irx-d, partial [Oikopleura dioica]
          Length = 253

 Score =  119 bits (297), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 58/91 (63%), Positives = 68/91 (74%), Gaps = 3/91 (3%)

Query: 54  LTAVRYGAG--YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQ 111
           L   RYG+   +     RKNATRE+TA LK WL EH +NPYPTK EKI LAII+ M+LTQ
Sbjct: 22  LQIFRYGSAGRFPSNGHRKNATRENTAPLKKWLEEHMRNPYPTKAEKITLAIISSMSLTQ 81

Query: 112 VSTWFANARRRLKKENKMTWE-PKNKTDDDD 141
           VSTWFANARRRLKKEN++TWE P+  T  D+
Sbjct: 82  VSTWFANARRRLKKENRVTWETPRETTGSDE 112


>gi|241696679|ref|XP_002413093.1| Iroquois-class homeobox protein IRX, putative [Ixodes scapularis]
 gi|215506907|gb|EEC16401.1| Iroquois-class homeobox protein IRX, putative [Ixodes scapularis]
          Length = 66

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/61 (91%), Positives = 59/61 (96%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKN 135
           +T TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP+N
Sbjct: 6   TTNTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPRN 65

Query: 136 K 136
           K
Sbjct: 66  K 66


>gi|426246863|ref|XP_004017207.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Ovis aries]
          Length = 260

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/104 (61%), Positives = 74/104 (71%), Gaps = 10/104 (9%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 
Sbjct: 86  YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR- 144

Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
                 +TW  ++K  +D     SD +   EK +DD  +D E +
Sbjct: 145 ------VTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 182


>gi|193202365|ref|NP_492533.2| Protein IRX-1 [Caenorhabditis elegans]
 gi|205831095|sp|Q93348.3|IRX1_CAEEL RecName: Full=Putative iroquois-class homeodomain protein irx-1
 gi|166156998|emb|CAB02816.2| Protein IRX-1 [Caenorhabditis elegans]
          Length = 377

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 74/109 (67%), Gaps = 1/109 (0%)

Query: 32  VPALQSRRQLCGIDKQVIQVSNLTAVRYGAGYDL-AARRKNATRESTATLKAWLNEHKKN 90
           +PA      L G     + +    A R    Y L   +++NATRE+TA LK WL+ H+KN
Sbjct: 81  IPADLKPEMLLGGGPGPMPMFFSDAHRLYHPYGLDGIKKRNATREATAPLKDWLHSHRKN 140

Query: 91  PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDD 139
           PYP+K +K+MLA+ T MTLTQVSTWFANARRRLKKENKMTW P+N+  D
Sbjct: 141 PYPSKADKVMLAVGTGMTLTQVSTWFANARRRLKKENKMTWSPQNRRGD 189


>gi|308474218|ref|XP_003099331.1| CRE-IRX-1 protein [Caenorhabditis remanei]
 gi|308267470|gb|EFP11423.1| CRE-IRX-1 protein [Caenorhabditis remanei]
          Length = 368

 Score =  117 bits (292), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/72 (70%), Positives = 63/72 (87%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           +++NATRE+TA LK WL+ H+KNPYP+K +K+MLA+ T MTLTQVSTWFANARRRLKKEN
Sbjct: 103 KKRNATREATAPLKDWLHTHRKNPYPSKNDKLMLAVTTGMTLTQVSTWFANARRRLKKEN 162

Query: 128 KMTWEPKNKTDD 139
           KMTW P+N+  D
Sbjct: 163 KMTWSPQNRRGD 174


>gi|18858903|ref|NP_571956.1| iroquois homeobox protein 7 [Danio rerio]
 gi|15149348|gb|AAK85254.1|AF398433_1 iroquois homeodomain transcription factor Ziro7 [Danio rerio]
 gi|20530589|gb|AAM27166.1|AF414133_1 iroquois7 [Danio rerio]
          Length = 314

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 61/67 (91%)

Query: 70  KNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM 129
           K ATREST+ LKAWL+EH KNPYPTKGEKIMLAI+TKM+LTQVSTWFANARRRLKKEN++
Sbjct: 109 KVATRESTSALKAWLSEHLKNPYPTKGEKIMLAIVTKMSLTQVSTWFANARRRLKKENRV 168

Query: 130 TWEPKNK 136
           +W  K K
Sbjct: 169 SWASKGK 175


>gi|82621561|gb|ABB86452.1| IRX-TALE class homeobox protein, partial [Nematostella vectensis]
 gi|110339161|gb|ABG67844.1| IRX, partial [Nematostella vectensis]
          Length = 60

 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/60 (91%), Positives = 59/60 (98%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAI+TKMTLTQVSTWFANARRRLKKEN
Sbjct: 1   RRKNATRETTSTLKAWLFEHRKNPYPTKGEKIMLAILTKMTLTQVSTWFANARRRLKKEN 60


>gi|63102332|gb|AAH95012.1| Iroquois homeobox protein 7 [Danio rerio]
 gi|182890430|gb|AAI64337.1| Irx7 protein [Danio rerio]
          Length = 314

 Score =  116 bits (290), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 61/67 (91%)

Query: 70  KNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM 129
           K ATREST+ LKAWL+EH KNPYPTKGEKIMLAI+TKM+LTQVSTWFANARRRLKKEN++
Sbjct: 109 KVATRESTSALKAWLSEHLKNPYPTKGEKIMLAIVTKMSLTQVSTWFANARRRLKKENRV 168

Query: 130 TWEPKNK 136
           +W  K K
Sbjct: 169 SWASKGK 175


>gi|268567069|ref|XP_002639882.1| C. briggsae CBR-IRX-1 protein [Caenorhabditis briggsae]
          Length = 341

 Score =  116 bits (290), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 51/72 (70%), Positives = 63/72 (87%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           +++NATRE+TA LK WL+ H+KNPYP+K +K+MLA+ T MTLTQVSTWFANARRRLKKEN
Sbjct: 107 KKRNATREATAPLKDWLHAHRKNPYPSKNDKLMLAVGTGMTLTQVSTWFANARRRLKKEN 166

Query: 128 KMTWEPKNKTDD 139
           KMTW P+N+  D
Sbjct: 167 KMTWSPQNRRGD 178


>gi|197282018|gb|ACH57188.1| Irx [Trichoplax adhaerens]
          Length = 63

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/61 (90%), Positives = 59/61 (96%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           ARRKNATRE+T+ LKAWL EH+KNPYPTKGEKIMLAI+TKMTLTQVSTWFANARRRLKKE
Sbjct: 3   ARRKNATRETTSILKAWLYEHRKNPYPTKGEKIMLAIMTKMTLTQVSTWFANARRRLKKE 62

Query: 127 N 127
           N
Sbjct: 63  N 63


>gi|443701881|gb|ELU00107.1| hypothetical protein CAPTEDRAFT_168300 [Capitella teleta]
          Length = 222

 Score =  115 bits (288), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 55/63 (87%), Positives = 58/63 (92%)

Query: 64  DLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
            L  RRKNAT+EST TLKAWL EHKKNPYPTKGEKIMLAI+T+MTLTQVSTWFANARRRL
Sbjct: 124 SLDPRRKNATKESTNTLKAWLYEHKKNPYPTKGEKIMLAILTRMTLTQVSTWFANARRRL 183

Query: 124 KKE 126
           KKE
Sbjct: 184 KKE 186


>gi|341895359|gb|EGT51294.1| hypothetical protein CAEBREN_07279 [Caenorhabditis brenneri]
          Length = 387

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 63/69 (91%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           +++NATRE+TA LK WL+ HKKNPYP+K +K+ LA++T+MTLTQVSTWFANARRRLKKEN
Sbjct: 112 KKRNATREATAPLKDWLHNHKKNPYPSKQDKLALAMLTQMTLTQVSTWFANARRRLKKEN 171

Query: 128 KMTWEPKNK 136
           KMTW P+N+
Sbjct: 172 KMTWSPQNR 180


>gi|341898276|gb|EGT54211.1| hypothetical protein CAEBREN_12980 [Caenorhabditis brenneri]
          Length = 387

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 63/69 (91%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           +++NATRE+TA LK WL+ HKKNPYP+K +K+ LA++T+MTLTQVSTWFANARRRLKKEN
Sbjct: 112 KKRNATREATAPLKDWLHNHKKNPYPSKQDKLALAMLTQMTLTQVSTWFANARRRLKKEN 171

Query: 128 KMTWEPKNK 136
           KMTW P+N+
Sbjct: 172 KMTWSPQNR 180


>gi|49902920|gb|AAH76162.1| Irx6a protein, partial [Danio rerio]
          Length = 212

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 58  RYG-AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           RYG   ++ + RRKNATRE+T+TLK WL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 140 RYGTVDFNGSTRRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 199

Query: 117 ANARRRL 123
           ANARRRL
Sbjct: 200 ANARRRL 206


>gi|196003458|ref|XP_002111596.1| IRX-TALE class homeobox protein [Trichoplax adhaerens]
 gi|190585495|gb|EDV25563.1| IRX-TALE class homeobox protein, partial [Trichoplax adhaerens]
          Length = 60

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/60 (90%), Positives = 58/60 (96%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RRKNATRE+T+ LKAWL EH+KNPYPTKGEKIMLAI+TKMTLTQVSTWFANARRRLKKEN
Sbjct: 1   RRKNATRETTSILKAWLYEHRKNPYPTKGEKIMLAIMTKMTLTQVSTWFANARRRLKKEN 60


>gi|354508046|ref|XP_003516065.1| PREDICTED: iroquois-class homeodomain protein IRX-6-like, partial
           [Cricetulus griseus]
          Length = 195

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/62 (83%), Positives = 56/62 (90%), Gaps = 3/62 (4%)

Query: 58  RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
           RYG G +L  A RRKNATREST+ LKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 135 RYG-GVELSGAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 193

Query: 116 FA 117
           FA
Sbjct: 194 FA 195


>gi|56694854|gb|AAW23089.1| Irx-e [Oikopleura dioica]
 gi|313244438|emb|CBY15230.1| unnamed protein product [Oikopleura dioica]
          Length = 214

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 61/86 (70%), Gaps = 6/86 (6%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           +R+   REST  LKAWL EH +NPYPTK EK+MLA+I+ M+LTQVSTWFANARRRLKKE+
Sbjct: 59  QRRQTARESTGPLKAWLQEHPRNPYPTKAEKVMLALISGMSLTQVSTWFANARRRLKKES 118

Query: 128 KMTWEPKNKTDDDDDAIISDCDEKDK 153
                  NK D  DD+I    D  D+
Sbjct: 119 ------GNKEDTSDDSIDGKDDTADE 138


>gi|363741551|ref|XP_003642519.1| PREDICTED: iroquois-class homeodomain protein irx-4-B-like [Gallus
           gallus]
          Length = 179

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/63 (68%), Positives = 53/63 (84%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 128
           +  A RES+A LKAWL  H +NPYP+KGEK+MLA+++ M+LTQVSTWFANARRRLKKEN+
Sbjct: 46  KAGAARESSAALKAWLARHPRNPYPSKGEKVMLAVLSHMSLTQVSTWFANARRRLKKENR 105

Query: 129 MTW 131
             W
Sbjct: 106 AGW 108


>gi|358336974|dbj|GAA55413.1| iroquois-class homeodomain protein irx-3 [Clonorchis sinensis]
          Length = 510

 Score =  102 bits (254), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 57/66 (86%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 128
           +K  TRE+T+ L+ WL +H+ NPYPTKGEK+MLA+ T+M LTQ+STWFANARRRLKK+N+
Sbjct: 166 KKVPTRETTSLLRKWLLQHQLNPYPTKGEKVMLALATRMNLTQISTWFANARRRLKKDNQ 225

Query: 129 MTWEPK 134
           MTW P+
Sbjct: 226 MTWYPR 231


>gi|28557607|gb|AAO45209.1| RE66853p [Drosophila melanogaster]
          Length = 443

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/65 (90%), Positives = 63/65 (96%), Gaps = 1/65 (1%)

Query: 92  YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEK 151
           YPTKGEKIMLAIITKMTLTQVSTWF NARRRLKKENKMTWEPKN+TDDDDDA++SD DEK
Sbjct: 8   YPTKGEKIMLAIITKMTLTQVSTWFTNARRRLKKENKMTWEPKNRTDDDDDALVSD-DEK 66

Query: 152 DKDDL 156
           DK+DL
Sbjct: 67  DKEDL 71


>gi|1899222|gb|AAB50003.1| iroquois-class homeodomain protein IRX-3 [Homo sapiens]
          Length = 195

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/58 (84%), Positives = 52/58 (89%), Gaps = 1/58 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVST
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVST 195


>gi|12659130|gb|AAK01201.1| iroquois-related homeobox transcription factor [Homo sapiens]
          Length = 94

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/58 (84%), Positives = 52/58 (89%), Gaps = 1/58 (1%)

Query: 58  RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           RYGA     A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVST
Sbjct: 37  RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVST 94


>gi|1899224|gb|AAB50004.1| iroquois-class homeodomain protein IRX-4 [Homo sapiens]
          Length = 112

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/57 (80%), Positives = 49/57 (85%), Gaps = 1/57 (1%)

Query: 58  RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           RYG   D   RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAI TKMTLTQVST
Sbjct: 57  RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAITTKMTLTQVST 112


>gi|1899228|gb|AAB50006.1| iroquois-class homeodomain protein IRX-1 [Homo sapiens]
          Length = 86

 Score = 92.4 bits (228), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 44/48 (91%), Positives = 47/48 (97%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVST
Sbjct: 39  SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVST 86


>gi|313245953|emb|CBY34929.1| unnamed protein product [Oikopleura dioica]
          Length = 396

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 10/80 (12%)

Query: 95  KGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKT---DDDDDAIISDCDEK 151
           K +KIMLAIITKMTLTQVSTWFANARRRLKKENKMTW PKN+    +DD+   + + +EK
Sbjct: 140 KAKKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWVPKNRATDGEDDESNGLGEENEK 199

Query: 152 D--KDDLMM-----DEEKMK 164
           D  KDD +      D EK++
Sbjct: 200 DGEKDDAVAFPTDHDREKVE 219


>gi|1899226|gb|AAB50005.1| iroquois-class homeodomain protein IRX-5 [Homo sapiens]
          Length = 93

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/52 (84%), Positives = 47/52 (90%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           Y    R KNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVST
Sbjct: 42  YGDPGRPKNATRENTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVST 93


>gi|393904291|gb|EFO12847.2| iroquois-class homeobox protein [Loa loa]
          Length = 89

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/61 (68%), Positives = 52/61 (85%), Gaps = 1/61 (1%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           Y +G D   RRKNATRE+TA LK+WLNEH+KNPYPTK EKIMLA++TKMTLTQV+  ++N
Sbjct: 25  YASGLD-GTRRKNATRETTAPLKSWLNEHRKNPYPTKAEKIMLALLTKMTLTQVNFKYSN 83

Query: 119 A 119
           +
Sbjct: 84  S 84


>gi|344254080|gb|EGW10184.1| Iroquois-class homeodomain protein IRX-2 [Cricetulus griseus]
          Length = 211

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/85 (57%), Positives = 60/85 (70%), Gaps = 4/85 (4%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQ+      A R L +E
Sbjct: 45  AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQMPV---RAVRLLAQE 101

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEK 151
           +  T+  + K      A++    E+
Sbjct: 102 SSPTYR-RAKLSSATSALLFCPGER 125


>gi|227464351|gb|ACP40498.1| araucan, partial [Drosophila elegans]
          Length = 72

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/60 (86%), Positives = 56/60 (93%), Gaps = 1/60 (1%)

Query: 97  EKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           EKI+LAIITKMTLTQVSTWFANARRRLKKENKMTWEPKN+TDDDDDA +   DEKDK+DL
Sbjct: 1   EKILLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDDDDDA-LVSDDEKDKEDL 59


>gi|170594875|ref|XP_001902160.1| Iroquois-class homeobox protein C36F7.1 [Brugia malayi]
 gi|312108994|ref|XP_003151222.1| iroquois-class homeobox protein [Loa loa]
 gi|158590320|gb|EDP28993.1| Iroquois-class homeobox protein C36F7.1, putative [Brugia malayi]
 gi|402579778|gb|EJW73729.1| hypothetical protein WUBG_15364, partial [Wuchereria bancrofti]
          Length = 76

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 1/53 (1%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQ 111
           Y +G D   RRKNATRE+TA LK+WLNEH+KNPYPTK EKIMLA++TKMTLTQ
Sbjct: 25  YASGLD-GTRRKNATRETTAPLKSWLNEHRKNPYPTKAEKIMLALLTKMTLTQ 76


>gi|441615035|ref|XP_003263257.2| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-1 [Nomascus leucogenys]
          Length = 260

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/45 (84%), Positives = 40/45 (88%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKM 107
           Y    R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKM
Sbjct: 129 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKM 173


>gi|227464353|gb|ACP40499.1| araucan, partial [Drosophila gunungcola]
          Length = 72

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 54/59 (91%), Gaps = 1/59 (1%)

Query: 98  KIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           + +LAIITKMTLTQVSTWFANARRRLKKENKMTWEPKN+TDDDDDA +   DEKDK+DL
Sbjct: 2   RFLLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDDDDDA-LVSDDEKDKEDL 59


>gi|157817925|ref|NP_001100883.1| iroquois-class homeodomain protein IRX-3 [Rattus norvegicus]
 gi|149032688|gb|EDL87558.1| Iroquois related homeobox 3 (Drosophila) (predicted), isoform CRA_b
           [Rattus norvegicus]
          Length = 326

 Score = 82.4 bits (202), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/47 (78%), Positives = 43/47 (91%)

Query: 100 MLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIIS 146
           MLAIITKMTLTQVSTWFANARRRLKKENKMTW P+++TD++ +A  S
Sbjct: 1   MLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEEGNAYGS 47


>gi|344235908|gb|EGV92011.1| Iroquois-class homeodomain protein IRX-3 [Cricetulus griseus]
          Length = 341

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/47 (78%), Positives = 43/47 (91%)

Query: 100 MLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIIS 146
           MLAIITKMTLTQVSTWFANARRRLKKENKMTW P+++TD++ +A  S
Sbjct: 1   MLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEEGNAYGS 47


>gi|318085513|gb|ADV39929.1| araucan [Drosophila elegans]
          Length = 68

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/56 (87%), Positives = 52/56 (92%), Gaps = 1/56 (1%)

Query: 101 LAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
           LAIITKMTLTQVSTWFANARRRLKKENKMTWEPKN+TDDDDDA +   DEKDK+DL
Sbjct: 1   LAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDDDDDA-LVSDDEKDKEDL 55


>gi|444514325|gb|ELV10556.1| Iroquois-class homeodomain protein IRX-2 [Tupaia chinensis]
          Length = 296

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 35/38 (92%), Positives = 37/38 (97%)

Query: 100 MLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKT 137
           MLAIITKMTLTQVSTWFANARRRLKKENKMTW P+NK+
Sbjct: 1   MLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKS 38


>gi|443705661|gb|ELU02094.1| hypothetical protein CAPTEDRAFT_224655 [Capitella teleta]
          Length = 376

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 65/106 (61%), Gaps = 15/106 (14%)

Query: 67  ARRKNATRESTAT-LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK- 124
            R K  T +  A  LK WL +H+ NPYPTK EK+ LA ++ MTLTQVS WFANARRRLK 
Sbjct: 121 VRHKRQTLQDMARPLKHWLYKHRDNPYPTKSEKMTLANVSHMTLTQVSNWFANARRRLKN 180

Query: 125 --KENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMM----DEEKMK 164
             ++ ++ WE + K       + + C E +++ L +    DEE+MK
Sbjct: 181 TVRDPELNWESRIK-------MYNSCVEGNQELLSIDSDDDEEEMK 219


>gi|148691080|gb|EDL23027.1| mohawk [Mus musculus]
          Length = 426

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 17/121 (14%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 146 KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 205

Query: 126 ENKMTWEPKNK--------------TDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
           +  ++W  + K                 D D+   D +   ++ +  +      HH ++K
Sbjct: 206 QPDLSWALRIKLYNKYVQGNAERLSVSSDGDSCSEDGENPPRNHMNEEGYSTPAHHTVIK 265

Query: 172 G 172
           G
Sbjct: 266 G 266


>gi|344237580|gb|EGV93683.1| Iroquois-class homeodomain protein IRX-1 [Cricetulus griseus]
          Length = 319

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 3/67 (4%)

Query: 100 MLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDL 156
           MLAIITKMTLTQVSTWFANARRRLKKENK+TW  ++K  +D     SD +   EK +DD 
Sbjct: 1   MLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKDQEDGVLFGSDTEGDPEKAEDDE 60

Query: 157 MMDEEKM 163
            +D E +
Sbjct: 61  EIDLESI 67


>gi|81913186|sp|Q8BIA3.1|MKX_MOUSE RecName: Full=Homeobox protein Mohawk
 gi|26330109|dbj|BAC28793.1| unnamed protein product [Mus musculus]
          Length = 353

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 17/121 (14%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTWEPKNK--------------TDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
           +  ++W  + K                 D D+   D +   ++ +  +      HH ++K
Sbjct: 134 QPDLSWALRIKLYNKYVQGNAERLSVSSDGDSCSEDGENPPRNHMNEEGYSTPAHHTVIK 193

Query: 172 G 172
           G
Sbjct: 194 G 194


>gi|158635988|ref|NP_808263.2| homeobox protein Mohawk [Mus musculus]
 gi|187952287|gb|AAI37729.1| Mohawk homeobox [Mus musculus]
          Length = 354

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 17/121 (14%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTWEPKNK--------------TDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
           +  ++W  + K                 D D+   D +   ++ +  +      HH ++K
Sbjct: 134 QPDLSWALRIKLYNKYVQGNAERLSVSSDGDSCSEDGENPPRNHMNEEGYSTPAHHTVIK 193

Query: 172 G 172
           G
Sbjct: 194 G 194


>gi|432913933|ref|XP_004079018.1| PREDICTED: homeobox protein Mohawk-like [Oryzias latipes]
          Length = 344

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 5/88 (5%)

Query: 49  IQVSNLTAVRYGAGYD-LAARRKNATRESTAT-LKAWLNEHKKNPYPTKGEKIMLAIITK 106
           + VS L   RYG+    +  R K    ++ A  LK WL +H+ NPYPTK EK++LA+ + 
Sbjct: 52  LNVSALKYRRYGSSLSGVKVRHKRQVLQNMARPLKHWLYKHRDNPYPTKTEKVLLALGSH 111

Query: 107 MTLTQVSTWFANARRRLK---KENKMTW 131
           MTL QVS WFANARRRLK   ++  ++W
Sbjct: 112 MTLVQVSNWFANARRRLKNTVRQPDLSW 139


>gi|392354446|ref|XP_214497.6| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Mohawk, partial
           [Rattus norvegicus]
          Length = 374

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 17/121 (14%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 168 KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 227

Query: 126 ENKMTWEPKNK--------------TDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
           +  ++W  + K                  DD+   D +   +  +  +      HH ++K
Sbjct: 228 QPDLSWALRIKLYNKYVQGNAERLSVSSADDSCSEDGENPPRTHMNEEGYSTPAHHTVIK 287

Query: 172 G 172
           G
Sbjct: 288 G 288


>gi|291238702|ref|XP_002739258.1| PREDICTED: mohawk-like [Saccoglossus kowalevskii]
          Length = 351

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/45 (75%), Positives = 38/45 (84%)

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           LKAWL +HK NPYPTK EKI+LA+ + MTL QVS WFANARRRLK
Sbjct: 77  LKAWLYKHKDNPYPTKTEKILLALGSHMTLVQVSNWFANARRRLK 121


>gi|354473454|ref|XP_003498950.1| PREDICTED: homeobox protein Mohawk [Cricetulus griseus]
 gi|344249074|gb|EGW05178.1| Homeobox protein Mohawk [Cricetulus griseus]
          Length = 352

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 18/134 (13%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           T VR   G      ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS 
Sbjct: 62  TGVRQNGGK--VRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSN 119

Query: 115 WFANARRRLK---KENKMTWEPKNK-------------TDDDDDAIISDCDEKDKDDLMM 158
           WFANARRRLK   ++  ++W  + K             +   DD+   D +   ++ +  
Sbjct: 120 WFANARRRLKNTVRQPDLSWALRIKLYNKYVQGNAERLSVSSDDSCSEDGENPPRNHMNE 179

Query: 159 DEEKMKQHHRMVKG 172
                  HH ++KG
Sbjct: 180 AGYSTPAHHTVIKG 193


>gi|392333981|ref|XP_001063892.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Mohawk [Rattus
           norvegicus]
          Length = 451

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 17/121 (14%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 168 KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 227

Query: 126 ENKMTWEPKNK--------------TDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
           +  ++W  + K                  DD+   D +   +  +  +      HH ++K
Sbjct: 228 QPDLSWALRIKLYNKYVQGNAERLSVSSADDSCSEDGENPPRTHMNEEGYSTPAHHTVIK 287

Query: 172 G 172
           G
Sbjct: 288 G 288


>gi|149028371|gb|EDL83768.1| iroquois homeobox protein-like 1 (predicted) [Rattus norvegicus]
          Length = 356

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 17/121 (14%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 73  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 132

Query: 126 ENKMTWEPKNK--------------TDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
           +  ++W  + K                  DD+   D +   +  +  +      HH ++K
Sbjct: 133 QPDLSWALRIKLYNKYVQGNAERLSVSSADDSCSEDGENPPRTHMNEEGYSTPAHHTVIK 192

Query: 172 G 172
           G
Sbjct: 193 G 193


>gi|449282629|gb|EMC89451.1| Homeobox protein Mohawk [Columba livia]
          Length = 352

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 3/67 (4%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK--- 124
           RR   +      LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   
Sbjct: 73  RRSGVSGAVRGPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTV 132

Query: 125 KENKMTW 131
           ++  ++W
Sbjct: 133 RQPDLSW 139


>gi|432926857|ref|XP_004080959.1| PREDICTED: homeobox protein Mohawk-like [Oryzias latipes]
          Length = 377

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 69  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 128

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 129 QPDLSW 134


>gi|426241722|ref|XP_004014738.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Mohawk [Ovis
           aries]
          Length = 391

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 29/130 (22%)

Query: 5   SPETKTLRPELQLFTQVPIQVNISSTKVPALQSRRQLCGIDKQVIQVSNLTAVRYGAGYD 64
           +P++   RPE+ +    P++ N+       L+ RR               T  R   G  
Sbjct: 75  APDSPHARPEVGITDGPPLKDNL------GLRHRR---------------TGARQNGG-- 111

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
              + ++  ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK
Sbjct: 112 ---KGRHXLQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLK 168

Query: 125 ---KENKMTW 131
              ++  ++W
Sbjct: 169 NTVRQPDLSW 178


>gi|363729646|ref|XP_001233726.2| PREDICTED: homeobox protein Mohawk [Gallus gallus]
          Length = 569

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 16/119 (13%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 291 KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 350

Query: 126 ENKMTWEPKNK-------------TDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
           +  ++W  + K             +   DD+   D +   ++ +         HH ++K
Sbjct: 351 QPDLSWALRIKLYNKYVQGNAERLSVSSDDSCSEDGENPPRNHMNEGGYNKPVHHTVIK 409


>gi|148540773|gb|ABQ86047.1| iroquois homeobox-like protein 1b [Danio rerio]
 gi|213626185|gb|AAI71658.1| Mohawk homeobox a [Danio rerio]
 gi|213627603|gb|AAI71660.1| Mohawk homeobox a [Danio rerio]
          Length = 308

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 70  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 129

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 130 QPDLSW 135


>gi|444732735|gb|ELW73010.1| Homeobox protein Mohawk [Tupaia chinensis]
          Length = 447

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 16/119 (13%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 169 KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 228

Query: 126 ENKMTWEPKNK-------------TDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
           +  ++W  + K             +   DD+   D +   +D +         HH ++K
Sbjct: 229 QPDLSWALRIKLYNKYVQGNAERLSVSSDDSCSEDGENPPRDLMNEGGYPTPVHHPVIK 287


>gi|47228001|emb|CAF97630.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 210

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 8/84 (9%)

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---KENKMTWEPK-- 134
           LK WL +H+ NPYPTK EK++LA+ + MTL QVS WFANARRRLK   ++  ++W  +  
Sbjct: 21  LKHWLYKHRDNPYPTKTEKVLLALGSHMTLVQVSNWFANARRRLKNTVRQPDLSWALRIK 80

Query: 135 --NKTDDDDDAIISDC-DEKDKDD 155
             NK    +   +S C D+ D DD
Sbjct: 81  LYNKYIQGNAERLSVCSDDTDSDD 104


>gi|410927404|ref|XP_003977139.1| PREDICTED: homeobox protein Mohawk-like isoform 1 [Takifugu
           rubripes]
          Length = 358

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 43/56 (76%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK
Sbjct: 70  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLK 125


>gi|297300700|ref|XP_001105456.2| PREDICTED: homeobox protein Mohawk-like [Macaca mulatta]
          Length = 238

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|296206370|ref|XP_002750215.1| PREDICTED: homeobox protein Mohawk [Callithrix jacchus]
          Length = 352

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 26/123 (21%)

Query: 12  RPELQLFTQVPIQVNISSTKVPALQSRRQLCGIDKQVIQVSNLTAVRYGAGYDLAARRKN 71
           RPE+ +    P++ N+S      L+ RR               T  R   G      ++ 
Sbjct: 40  RPEVGIPDGPPLKDNLS------LRHRR---------------TGARQNGGK--VRHKRQ 76

Query: 72  ATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---KENK 128
           A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   ++  
Sbjct: 77  ALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVRQPD 136

Query: 129 MTW 131
           ++W
Sbjct: 137 LSW 139


>gi|449492381|ref|XP_002189668.2| PREDICTED: homeobox protein Mohawk [Taeniopygia guttata]
          Length = 525

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 16/119 (13%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 247 KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 306

Query: 126 ENKMTWEPKNK-------------TDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
           +  ++W  + K             +   DD+   D +   ++ +         HH ++K
Sbjct: 307 QPDLSWALRIKLYNKYVQGNAERLSVSSDDSCSEDGENPPRNHMNEGGYNKPVHHTVIK 365


>gi|395827175|ref|XP_003786781.1| PREDICTED: homeobox protein Mohawk [Otolemur garnettii]
          Length = 352

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|410927406|ref|XP_003977140.1| PREDICTED: homeobox protein Mohawk-like isoform 2 [Takifugu
           rubripes]
          Length = 350

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 43/56 (76%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK
Sbjct: 70  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLK 125


>gi|348525558|ref|XP_003450289.1| PREDICTED: homeobox protein Mohawk-like isoform 2 [Oreochromis
           niloticus]
          Length = 375

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 70  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 129

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 130 QPDLSW 135


>gi|317419711|emb|CBN81747.1| Homeobox protein Mohawk [Dicentrarchus labrax]
          Length = 373

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 43/56 (76%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK
Sbjct: 70  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLK 125


>gi|348525556|ref|XP_003450288.1| PREDICTED: homeobox protein Mohawk-like isoform 1 [Oreochromis
           niloticus]
          Length = 369

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 43/56 (76%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK
Sbjct: 70  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLK 125


>gi|181336881|ref|NP_001092203.2| homeobox protein Mohawk [Danio rerio]
 gi|148540771|gb|ABQ86046.1| iroquois homeobox-like protein 1a [Danio rerio]
          Length = 349

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 70  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 129

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 130 QPDLSW 135


>gi|161778854|gb|ABX79348.1| homeobox protein mohawk A [Danio rerio]
          Length = 349

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 70  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 129

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 130 QPDLSW 135


>gi|300796015|ref|NP_001179463.1| homeobox protein Mohawk [Bos taurus]
 gi|296481403|tpg|DAA23518.1| TPA: mohawk homeobox-like [Bos taurus]
 gi|440911278|gb|ELR60968.1| Homeobox protein Mohawk [Bos grunniens mutus]
          Length = 352

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|359318867|ref|XP_544207.4| PREDICTED: homeobox protein Mohawk [Canis lupus familiaris]
          Length = 352

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|291401959|ref|XP_002717341.1| PREDICTED: mohawk homeobox [Oryctolagus cuniculus]
          Length = 357

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 78  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 137

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 138 QPDLSW 143


>gi|410963382|ref|XP_003988244.1| PREDICTED: homeobox protein Mohawk [Felis catus]
          Length = 352

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|351712338|gb|EHB15257.1| Homeobox protein Mohawk [Heterocephalus glaber]
          Length = 349

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|402879866|ref|XP_003903545.1| PREDICTED: homeobox protein Mohawk [Papio anubis]
          Length = 352

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|355562359|gb|EHH18953.1| Homeobox protein Mohawk [Macaca mulatta]
          Length = 352

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|403295003|ref|XP_003938446.1| PREDICTED: homeobox protein Mohawk [Saimiri boliviensis
           boliviensis]
          Length = 352

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|301607158|ref|XP_002933178.1| PREDICTED: homeobox protein Mohawk-like [Xenopus (Silurana)
           tropicalis]
          Length = 349

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/45 (71%), Positives = 38/45 (84%)

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK
Sbjct: 82  LKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLK 126


>gi|355782709|gb|EHH64630.1| Homeobox protein Mohawk [Macaca fascicularis]
          Length = 352

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|348565771|ref|XP_003468676.1| PREDICTED: homeobox protein Mohawk-like [Cavia porcellus]
          Length = 352

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|332240540|ref|XP_003269445.1| PREDICTED: homeobox protein Mohawk [Nomascus leucogenys]
          Length = 352

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|149743657|ref|XP_001495786.1| PREDICTED: homeobox protein Mohawk-like [Equus caballus]
          Length = 330

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 52  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 111

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 112 QPDLSW 117


>gi|126341214|ref|XP_001367014.1| PREDICTED: homeobox protein Mohawk [Monodelphis domestica]
          Length = 354

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 76  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 135

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 136 QPDLSW 141


>gi|114629830|ref|XP_001160740.1| PREDICTED: homeobox protein Mohawk isoform 1 [Pan troglodytes]
 gi|410297046|gb|JAA27123.1| mohawk homeobox [Pan troglodytes]
          Length = 352

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|148231035|ref|NP_001086829.1| mohawk homeobox [Xenopus laevis]
 gi|50415362|gb|AAH77517.1| MGC82772 protein [Xenopus laevis]
          Length = 358

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 71  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 130

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 131 QPDLSW 136


>gi|345806449|ref|XP_850661.2| PREDICTED: homeobox protein Mohawk-like [Canis lupus familiaris]
          Length = 239

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 14  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 73

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 74  QPDLSW 79


>gi|178057337|ref|NP_775847.2| homeobox protein Mohawk [Homo sapiens]
 gi|336595227|ref|NP_001229631.1| homeobox protein Mohawk [Homo sapiens]
 gi|397501625|ref|XP_003821481.1| PREDICTED: homeobox protein Mohawk [Pan paniscus]
 gi|426364308|ref|XP_004049260.1| PREDICTED: homeobox protein Mohawk [Gorilla gorilla gorilla]
 gi|296437371|sp|Q8IYA7.2|MKX_HUMAN RecName: Full=Homeobox protein Mohawk
 gi|119606458|gb|EAW86052.1| iroquois homeobox protein-like 1, isoform CRA_a [Homo sapiens]
 gi|119606459|gb|EAW86053.1| iroquois homeobox protein-like 1, isoform CRA_a [Homo sapiens]
 gi|193785034|dbj|BAG54187.1| unnamed protein product [Homo sapiens]
 gi|261858770|dbj|BAI45907.1| mohawk homeobox protein [synthetic construct]
          Length = 352

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|23273613|gb|AAH36207.1| Mohawk homeobox [Homo sapiens]
 gi|312150386|gb|ADQ31705.1| mohawk homeobox [synthetic construct]
          Length = 352

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|344277928|ref|XP_003410749.1| PREDICTED: homeobox protein Mohawk [Loxodonta africana]
          Length = 352

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|149634730|ref|XP_001507016.1| PREDICTED: homeobox protein Mohawk-like [Ornithorhynchus anatinus]
          Length = 397

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 5/80 (6%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
              R G G      ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS 
Sbjct: 107 AGARQGGGK--VRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSN 164

Query: 115 WFANARRRLK---KENKMTW 131
           WFANARRRLK   ++  ++W
Sbjct: 165 WFANARRRLKNTVRQPDLSW 184


>gi|395539889|ref|XP_003771896.1| PREDICTED: homeobox protein Mohawk [Sarcophilus harrisii]
          Length = 353

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 75  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 134

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 135 QPDLSW 140


>gi|327274663|ref|XP_003222096.1| PREDICTED: homeobox protein Mohawk-like [Anolis carolinensis]
          Length = 350

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 72  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 131

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 132 QPDLSW 137


>gi|260819798|ref|XP_002605223.1| iroquois family related homeobox [Branchiostoma floridae]
 gi|229290554|gb|EEN61233.1| iroquois family related homeobox [Branchiostoma floridae]
          Length = 285

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/55 (60%), Positives = 43/55 (78%), Gaps = 3/55 (5%)

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---KENKMTW 131
           LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   ++  ++W
Sbjct: 43  LKQWLIKHRDNPYPTKTEKILLALTSQMTLVQVSNWFANARRRLKNTVRDPDLSW 97


>gi|326921614|ref|XP_003207052.1| PREDICTED: homeobox protein Mohawk-like [Meleagris gallopavo]
          Length = 347

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   +
Sbjct: 69  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 128

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 129 QPDLSW 134


>gi|167555236|ref|NP_001107881.1| homeobox protein Mohawk [Danio rerio]
 gi|161778856|gb|ABX79349.1| homeobox protein mohawk B [Danio rerio]
          Length = 337

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 42/56 (75%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ + MTL QVS WFANARRRLK
Sbjct: 65  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSHMTLVQVSNWFANARRRLK 120


>gi|431891360|gb|ELK02235.1| Homeobox protein Mohawk [Pteropus alecto]
          Length = 272

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/55 (60%), Positives = 43/55 (78%), Gaps = 3/55 (5%)

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---KENKMTW 131
           LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK   ++  ++W
Sbjct: 5   LKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVRQPDLSW 59


>gi|432101725|gb|ELK29732.1| Homeobox protein Mohawk [Myotis davidii]
          Length = 270

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/45 (71%), Positives = 38/45 (84%)

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK
Sbjct: 5   LKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLK 49


>gi|380797399|gb|AFE70575.1| homeobox protein Mohawk, partial [Macaca mulatta]
          Length = 275

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/45 (71%), Positives = 38/45 (84%)

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK
Sbjct: 8   LKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLK 52


>gi|410924886|ref|XP_003975912.1| PREDICTED: homeobox protein Mohawk-like [Takifugu rubripes]
          Length = 352

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 11/90 (12%)

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---KENKMTWEPK-- 134
           LK WL +H+ NPYPTK EK++LA+ + MTL QVS WFANARRRLK   ++  ++W  +  
Sbjct: 76  LKHWLYKHRDNPYPTKTEKVLLALGSHMTLVQVSNWFANARRRLKNTVRQPDLSWALRIK 135

Query: 135 --NKTDDDDDAIISDCDEKDKDDLMMDEEK 162
             NK    +   +S C     DD   DEE+
Sbjct: 136 LYNKYIQGNAERLSVC----SDDTDSDEEE 161


>gi|359318890|ref|XP_849265.3| PREDICTED: homeobox protein Mohawk-like [Canis lupus familiaris]
          Length = 316

 Score = 72.8 bits (177), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL  VS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVHVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|348531790|ref|XP_003453391.1| PREDICTED: homeobox protein Mohawk-like [Oreochromis niloticus]
          Length = 352

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 3/55 (5%)

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---KENKMTW 131
           LK WL +H+ NPYPTK EK++LA+ + MTL QVS WFANARRRLK   ++  ++W
Sbjct: 84  LKHWLYKHRDNPYPTKTEKVLLALGSHMTLVQVSNWFANARRRLKNTVRQPDLSW 138


>gi|197101831|ref|NP_001126505.1| homeobox protein Mohawk [Pongo abelii]
 gi|75070542|sp|Q5R6P2.1|MKX_PONAB RecName: Full=Homeobox protein Mohawk
 gi|55731726|emb|CAH92568.1| hypothetical protein [Pongo abelii]
          Length = 352

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 3/66 (4%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+  +MTL QVS WFANARRRLK   +
Sbjct: 74  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGPQMTLVQVSNWFANARRRLKNTVR 133

Query: 126 ENKMTW 131
           +  ++W
Sbjct: 134 QPDLSW 139


>gi|390346775|ref|XP_790995.2| PREDICTED: homeobox protein Mohawk-like [Strongylocentrotus
           purpuratus]
          Length = 377

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 10/104 (9%)

Query: 68  RRKNATRESTAT-LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK- 125
           R K  T +S A  LK WL  HK  PYP + EK++L++ + MTL QVS WFANARRRLK  
Sbjct: 53  RHKRQTMKSMARPLKQWLYHHKDYPYPNRKEKLLLSMESTMTLVQVSNWFANARRRLKNT 112

Query: 126 --ENKMTWEP------KNKTDDDDDAIISDCDEKDKDDLMMDEE 161
             +  M+WE       K+ T + +   IS  +    DD   +EE
Sbjct: 113 VHDPAMSWEKRIHKYNKHVTGNAERLSISSVESSGGDDFDDEEE 156


>gi|241112540|ref|XP_002399739.1| hypothetical protein IscW_ISCW017111 [Ixodes scapularis]
 gi|215493032|gb|EEC02673.1| hypothetical protein IscW_ISCW017111 [Ixodes scapularis]
          Length = 342

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 51/99 (51%), Gaps = 19/99 (19%)

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE---NKMTW----- 131
           LK WL  H+  PYP+K EK+ LA+ + MTL QVS WFANARRRLK       M W     
Sbjct: 136 LKKWLIRHRDKPYPSKAEKLALALGSHMTLEQVSNWFANARRRLKNTVFLPGMNWGDRIR 195

Query: 132 ----------EPKNKTDDDDDAIISDCDEKDKDDLMMDE 160
                     EP +    DD    S+CD ++ D+   D+
Sbjct: 196 QYNNFISGNSEPLS-ISSDDSIWDSECDSRNNDEDFADD 233


>gi|440802859|gb|ELR23783.1| Homeobox domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 94

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 4/71 (5%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           +R N T+E    + AW+NEH  NPYPTK EK  L++ T +T TQ+S WF NARRR  K N
Sbjct: 21  KRDNLTQEVKEVMMAWINEHIANPYPTKEEKEELSLRTGLTTTQISNWFTNARRRYLKIN 80

Query: 128 KMTWEPKNKTD 138
               EP+ + D
Sbjct: 81  ----EPEKQQD 87


>gi|281200802|gb|EFA75019.1| putative homeobox transcription factor [Polysphondylium pallidum
           PN500]
          Length = 565

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 37/49 (75%)

Query: 75  ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           EST+ LK+WL EH  +PYPT+ EK MLA  T ++ +Q++ WF NARRR+
Sbjct: 490 ESTSILKSWLFEHNMHPYPTEDEKAMLANATSLSFSQINNWFTNARRRI 538


>gi|384491315|gb|EIE82511.1| hypothetical protein RO3G_07216 [Rhizopus delemar RA 99-880]
          Length = 189

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 38/56 (67%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +  TA L+ WL +HKK+PYPT+ EK  LA  T + L Q+S WF NARRR+
Sbjct: 89  RRGNLPKAVTAILRDWLCKHKKHPYPTEEEKAQLAAETNLNLNQISNWFINARRRI 144


>gi|348020121|gb|AEP44002.1| sine oculis-like transcription factor [Craspedacusta sowerbyi]
          Length = 422

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 66  AARRKNAT-RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
            ARR N+  RE+T+ LK+WL+ H  +PYP+  EK  LA ++ ++  QV TWFANARRR K
Sbjct: 175 GARRTNSLPREATSVLKSWLHCHAADPYPSALEKQELARLSGLSGGQVKTWFANARRRSK 234

Query: 125 K 125
           K
Sbjct: 235 K 235


>gi|403342829|gb|EJY70739.1| hypothetical protein OXYTRI_08399 [Oxytricha trifallax]
          Length = 455

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 21/126 (16%)

Query: 42  CGID------KQVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTK 95
           CG++      K  ++++ +   RY        R  N  + S   LK WLN+H  NPYPT 
Sbjct: 31  CGLEEEEIDYKGALKITRIKNRRY-------IRMPNFAKRSVNILKNWLNQHLDNPYPTH 83

Query: 96  GEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDD 155
            EK +L+  + ++  Q+  WF NAR+R+       W+P  K   DDD + S+    + + 
Sbjct: 84  KEKDLLSQESGLSKRQIQNWFTNARKRI-------WQPMIKNHQDDD-LSSNIIPMNLEQ 135

Query: 156 LMMDEE 161
            M+D+E
Sbjct: 136 QMIDDE 141


>gi|384496537|gb|EIE87028.1| hypothetical protein RO3G_11739 [Rhizopus delemar RA 99-880]
          Length = 245

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +E T  L+ WL +HKK+PYP + EKI LA  T +T+ Q+S WF NARRR+
Sbjct: 129 RRGNLPKEVTEFLRTWLIQHKKHPYPAEKEKIDLAQQTGLTVNQISNWFINARRRI 184


>gi|384493517|gb|EIE84008.1| hypothetical protein RO3G_08713 [Rhizopus delemar RA 99-880]
          Length = 225

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +E T  L+ WL +HKK+PYP + EKI LA  T +T+ Q+S WF NARRR+
Sbjct: 135 RRGNLPKEVTEFLRTWLIQHKKHPYPAEKEKIDLAQQTGLTVNQISNWFINARRRI 190


>gi|72041753|ref|XP_780940.1| PREDICTED: uncharacterized protein LOC575445 [Strongylocentrotus
           purpuratus]
          Length = 349

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 37/59 (62%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  +E+   LKAWL EH+ N YP   EK+ L+ +  +TL QV  WF NARRR+  E
Sbjct: 47  RRGNLPKEAVNILKAWLYEHRYNAYPNDQEKLYLSRLANLTLLQVCNWFINARRRILPE 105


>gi|384500890|gb|EIE91381.1| hypothetical protein RO3G_16092 [Rhizopus delemar RA 99-880]
          Length = 207

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  ++ TA LK WL +H K+PYPT+ EK  L   T+++L Q+S WF NARRRL
Sbjct: 113 RRGNLPKDVTAVLKGWLKDHLKHPYPTEEEKKELVKRTELSLNQISNWFINARRRL 168


>gi|384488372|gb|EIE80552.1| hypothetical protein RO3G_05257 [Rhizopus delemar RA 99-880]
          Length = 174

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 37/56 (66%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +  TA L+ WL +H  NPYPT+ EK  L + T +TL Q+S WF NARRRL
Sbjct: 94  RRGNLPKTITAILREWLIDHCHNPYPTESEKNELRLATGLTLNQISNWFINARRRL 149


>gi|358375150|dbj|GAA91736.1| homeobox transcription factor [Aspergillus kawachii IFO 4308]
          Length = 325

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR-LKKE 126
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR L   
Sbjct: 227 RRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLTISQISNWFINARRRQLPAL 286

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
                   N  D    +  SD D+          E M   H++VK
Sbjct: 287 RNQMRNGGNDIDSQRQSPFSDMDQTSP-------ESMPSPHQIVK 324


>gi|134074662|emb|CAK44695.1| unnamed protein product [Aspergillus niger]
          Length = 327

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR-LKKE 126
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR L   
Sbjct: 229 RRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLTISQISNWFINARRRQLPAL 288

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
                   N  D    +  SD D+          E M   H++VK
Sbjct: 289 RNQMRNGGNDIDSQRQSPFSDMDQTSP-------ESMPSPHQIVK 326


>gi|407922016|gb|EKG15145.1| Homeobox [Macrophomina phaseolina MS6]
          Length = 310

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 5/105 (4%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RR N  +E+TA LK W ++H   PYP+  EK  LA+ T ++  Q+S WF NARRR     
Sbjct: 204 RRGNLPKEATALLKQWFHDHSDAPYPSDEEKSALAMQTGLSNAQISNWFINARRRTPGRE 263

Query: 128 KMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKG 172
                 + K +  + A++    ++ + D   +EE+++  H +  G
Sbjct: 264 ARE---QAKQNRQNQALMQGQQQRPQQD--AEEEQLRSAHALPSG 303


>gi|321473498|gb|EFX84465.1| hypothetical protein DAPPUDRAFT_314795 [Daphnia pulex]
          Length = 356

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 38/50 (76%)

Query: 74  RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           R++TA L++WL +H  +PYPT+ EK  LA  TK+TL QV+ WF NARRR+
Sbjct: 252 RKATAVLRSWLFQHLVHPYPTEEEKKQLATQTKLTLLQVNNWFINARRRI 301


>gi|317038716|ref|XP_001402056.2| homeobox transcription factor [Aspergillus niger CBS 513.88]
          Length = 324

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR-LKKE 126
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR L   
Sbjct: 226 RRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLTISQISNWFINARRRQLPAL 285

Query: 127 NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
                   N  D    +  SD D+          E M   H++VK
Sbjct: 286 RNQMRNGGNDIDSQRQSPFSDMDQTSP-------ESMPSPHQIVK 323


>gi|405963125|gb|EKC28725.1| Homeobox protein TGIF2 [Crassostrea gigas]
          Length = 230

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 64  DLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           D   RR N  +E+   LK WL EH+ N YP+  EK+ L+  T +T+ QV  WF NARRR+
Sbjct: 36  DARRRRGNLPKEAVRILKTWLYEHRYNAYPSDQEKVYLSSATNLTVLQVCNWFINARRRI 95

Query: 124 KKE 126
             E
Sbjct: 96  LPE 98


>gi|27528510|emb|CAC83019.1| iroquios homeodomain protein [Suberites domuncula]
          Length = 419

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 36/59 (61%)

Query: 78  ATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNK 136
           A L  W+ EH  NPYPTK EK  LA    MT  Q++ WFANARR +KK    TW+ K+ 
Sbjct: 74  AVLVLWIEEHSANPYPTKAEKNFLAHYAGMTTRQLNDWFANARRNIKKIGYETWKEKHS 132


>gi|406865703|gb|EKD18744.1| homeobox and C2H2 transcription factor [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 771

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/57 (43%), Positives = 42/57 (73%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           +++ +++    LKAWL+EH+ +PYP++ EK+ L   T +T+ Q+S WFANARRR ++
Sbjct: 262 KRSISKQDIRVLKAWLSEHRHSPYPSEDEKLELRATTGLTILQISNWFANARRRQRQ 318


>gi|145254342|ref|XP_001398599.1| homeobox protein meis [Aspergillus niger CBS 513.88]
 gi|134084179|emb|CAK47212.1| unnamed protein product [Aspergillus niger]
          Length = 534

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 36/56 (64%)

Query: 75  ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 130
           E+  TLK+WLN H +NPYPT  EK  LA  T +T  QVS WF NARRR +    M+
Sbjct: 79  EAVRTLKSWLNNHPENPYPTTQEKDELAQRTSLTRAQVSNWFINARRRKRSSGYMS 134


>gi|350630470|gb|EHA18842.1| hypothetical protein ASPNIDRAFT_42654 [Aspergillus niger ATCC 1015]
          Length = 533

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 36/56 (64%)

Query: 75  ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 130
           E+  TLK+WLN H +NPYPT  EK  LA  T +T  QVS WF NARRR +    M+
Sbjct: 78  EAVRTLKSWLNNHPENPYPTTQEKDELAQRTSLTRAQVSNWFINARRRKRSSGYMS 133


>gi|392865087|gb|EAS30838.2| hypothetical protein CIMG_06089 [Coccidioides immitis RS]
          Length = 646

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/52 (55%), Positives = 40/52 (76%)

Query: 71  NATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           N ++++   LK WL ++ ++PYPTK EK  LA  T++T+TQVSTWFANARRR
Sbjct: 95  NWSKDAVEVLKKWLKQNCRHPYPTKQEKAELAEQTELTVTQVSTWFANARRR 146


>gi|119182070|ref|XP_001242193.1| hypothetical protein CIMG_06089 [Coccidioides immitis RS]
          Length = 555

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 41/56 (73%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
            +  N ++++   LK WL ++ ++PYPTK EK  LA  T++T+TQVSTWFANARRR
Sbjct: 91  GKLSNWSKDAVEVLKKWLKQNCRHPYPTKQEKAELAEQTELTVTQVSTWFANARRR 146


>gi|284927656|gb|ADC29551.1| iroquois homeodomain protein a [Suberites domuncula]
          Length = 454

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 36/59 (61%)

Query: 78  ATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNK 136
           A L  W+ EH  NPYPTK EK  LA    MT  Q++ WFANARR +KK    TW+ K+ 
Sbjct: 74  AVLVLWIEEHSANPYPTKAEKNXLAHYAGMTTRQLNDWFANARRNIKKIGYETWKEKHS 132


>gi|297744767|emb|CBI38029.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           S + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL K    +M  E 
Sbjct: 372 SVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEE 431

Query: 134 KNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
               D D ++   +  +  K D+   EE+
Sbjct: 432 IGDADMDSNSSSENAPKATKSDIRASEER 460


>gi|260790971|ref|XP_002590514.1| hypothetical protein BRAFLDRAFT_86186 [Branchiostoma floridae]
 gi|229275708|gb|EEN46525.1| hypothetical protein BRAFLDRAFT_86186 [Branchiostoma floridae]
          Length = 575

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 38/59 (64%)

Query: 74  RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWE 132
           RE+   L+AW  +H  +PYP+  EK  LA +T +T+ QVSTWF N RRRL ++    W+
Sbjct: 92  REAKKKLQAWFLDHLYHPYPSGAEKYDLAKLTDLTVKQVSTWFQNTRRRLHQQQDTNWD 150


>gi|282161376|gb|ADA79644.1| TGIF homeodomain transcription factor, partial [Patiria miniata]
          Length = 347

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 35/56 (62%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +E+   LK WL EH+ N YP   EK+ LA +  +TL QV  WF NARRR+
Sbjct: 51  RRGNLPKEAVNILKLWLYEHRYNAYPNDQEKMHLARVANLTLLQVCNWFINARRRI 106


>gi|290996216|ref|XP_002680678.1| homeobox protein PKNOX1-like protein [Naegleria gruberi]
 gi|284094300|gb|EFC47934.1| homeobox protein PKNOX1-like protein [Naegleria gruberi]
          Length = 739

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 16/113 (14%)

Query: 43  GIDKQVIQVSNLTAVRYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIM 100
           G+ KQ+++   LT +       L  + RR N  R +T  LK+WL  H  +PYPT+ EK  
Sbjct: 557 GLMKQLLKDKYLTKILSTQENTLMRSKRRGNLPRHATNVLKSWLYSHFLHPYPTESEKKD 616

Query: 101 LAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDK 153
           L + T +TLTQV+ WF N R R       TW P  ++       + D D+KDK
Sbjct: 617 LCMETGLTLTQVNNWFINQRVR-------TWRPMLES-------MLDGDQKDK 655


>gi|45382415|ref|NP_990710.1| homeobox protein AKR [Gallus gallus]
 gi|2495269|sp|Q90655.1|AKR_CHICK RecName: Full=Homeobox protein AKR; AltName: Full=Avian
           knotted-related protein
 gi|857682|gb|AAA83567.1| homeodomain protein AKR [Gallus gallus]
          Length = 269

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 39/63 (61%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK++L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKVLLSRQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|326917454|ref|XP_003205014.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein AKR-like
           [Meleagris gallopavo]
          Length = 269

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 39/63 (61%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK++L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKVLLSRQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|296418344|ref|XP_002838798.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634766|emb|CAZ82989.1| unnamed protein product [Tuber melanosporum]
          Length = 97

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+ WLN+H  +PYPT+ EK ML   T + + QVS WF NARRR
Sbjct: 15  RRGNLPKHVTDLLRGWLNDHLHHPYPTEDEKQMLMQQTGLNINQVSNWFINARRR 69


>gi|258569963|ref|XP_002543785.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237904055|gb|EEP78456.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 329

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 8/103 (7%)

Query: 28  SSTKVPALQSRRQLCGIDKQVIQVSNLT---AVRYGAGYDLA-----ARRKNATRESTAT 79
           S+   PA  S +   G + +    S+ T   + +Y +  D A      RR N  + +T  
Sbjct: 190 SAYNSPAHGSYQSYYGGEHESAAQSHFTDAKSTKYDSFGDSADSKSKKRRGNLPKPTTDI 249

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           L+AW  EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 250 LRAWFYEHLDHPYPSEQDKQMFITRTGLTISQISNWFINARRR 292


>gi|347827237|emb|CCD42934.1| similar to transcription factor Zn, C2H2/Homeo [Botryotinia
           fuckeliana]
          Length = 1429

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 15/113 (13%)

Query: 18  FTQVPIQVNISSTKVPALQSRRQLCGIDKQVIQVSNLTAVRYGAGYDLAARRKNATREST 77
           +   P+  N SST +PALQ+  +   +   V   S+    R+             +R+S 
Sbjct: 247 YNSYPVSQNNSSTDLPALQTSTE--NLKSDVGDNSSKVGARF-------------SRQSV 291

Query: 78  ATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 130
             LK WL  H ++PYPT  E+ +L   T +  TQ++ W ANARRR K    +T
Sbjct: 292 RILKDWLGLHHRHPYPTDSERDILMSKTGLNKTQITNWLANARRRGKTRPTVT 344


>gi|320041173|gb|EFW23106.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 599

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/52 (55%), Positives = 38/52 (73%)

Query: 71  NATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           N + ++   LK WL +  ++PYPTK EK  LA  T++T+TQVSTWFANARRR
Sbjct: 75  NWSEDAVEVLKKWLKQDCRHPYPTKQEKAELAEQTELTVTQVSTWFANARRR 126


>gi|154311764|ref|XP_001555211.1| hypothetical protein BC1G_06341 [Botryotinia fuckeliana B05.10]
          Length = 1422

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 15/113 (13%)

Query: 18  FTQVPIQVNISSTKVPALQSRRQLCGIDKQVIQVSNLTAVRYGAGYDLAARRKNATREST 77
           +   P+  N SST +PALQ+  +   +   V   S+    R+             +R+S 
Sbjct: 253 YNSYPVSQNNSSTDLPALQTSTE--NLKSDVGDNSSKVGARF-------------SRQSV 297

Query: 78  ATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 130
             LK WL  H ++PYPT  E+ +L   T +  TQ++ W ANARRR K    +T
Sbjct: 298 RILKDWLGLHHRHPYPTDSERDILMSKTGLNKTQITNWLANARRRGKTRPTVT 350


>gi|320165982|gb|EFW42881.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 518

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 37/60 (61%)

Query: 64  DLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           D   RR N  + S A LK WL +H  NPYPT  EK  LA  T + ++QV+ WF NARRR+
Sbjct: 451 DNTPRRSNLRKASVAILKQWLLDHVSNPYPTDIEKDALAQATDLNVSQVNNWFINARRRI 510


>gi|384494376|gb|EIE84867.1| hypothetical protein RO3G_09577 [Rhizopus delemar RA 99-880]
          Length = 247

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 38/56 (67%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +E T  LK WL  HK++PYPT+ EK  LA  T + ++Q+S WF NARRR+
Sbjct: 116 RRGNLPKEVTEFLKQWLLLHKRHPYPTEREKQQLADETGLMVSQISNWFINARRRI 171


>gi|359475104|ref|XP_003631586.1| PREDICTED: BEL1-like homeodomain protein 3-like [Vitis vinifera]
          Length = 691

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           S + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL K    +M  E 
Sbjct: 422 SVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEE 481

Query: 134 KNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
               D D ++   +  +  K D+   EE+
Sbjct: 482 IGDADMDSNSSSENAPKATKSDIRASEER 510


>gi|262479299|gb|ACY68674.1| Pth12 [Cladonia grayi]
          Length = 130

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE- 126
           RR N  R++T  LK W   H  +PYPT+ EK ML   T + +T +S WF NARRR   E 
Sbjct: 49  RRGNLPRDTTDMLKQWFAXHLAHPYPTEDEKQMLCRRTGLAMTXISNWFINARRRXIPEL 108

Query: 127 -NKMTWEPKNKTDDDDDAIISD 147
            N    E + + +  D A  SD
Sbjct: 109 MNXAQAETRLRENSGDSAGSSD 130


>gi|47223435|emb|CAG04296.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 287

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 38/59 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T+++  QV  WF NARRRL  E
Sbjct: 34  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSKQTQLSTLQVCNWFINARRRLLPE 92


>gi|50554269|ref|XP_504543.1| YALI0E29271p [Yarrowia lipolytica]
 gi|49650412|emb|CAG80147.1| YALI0E29271p [Yarrowia lipolytica CLIB122]
          Length = 510

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 38/55 (69%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T+ L+ WLN+H  +PYP++ EK +L   T +T++Q+S WF NARRR
Sbjct: 429 RRGNLPKSVTSILREWLNDHISHPYPSEYEKSLLLQQTGLTMSQLSNWFINARRR 483


>gi|302884124|ref|XP_003040959.1| hypothetical protein NECHADRAFT_54513 [Nectria haematococca mpVI
           77-13-4]
 gi|256721853|gb|EEU35246.1| hypothetical protein NECHADRAFT_54513 [Nectria haematococca mpVI
           77-13-4]
          Length = 761

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 73  TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           TRES   LK W +EH ++PYP++ EK ML   T ++ TQV+ W ANARRR
Sbjct: 118 TRESARVLKRWFSEHSEHPYPSEEEKTMLQCQTGLSRTQVTNWLANARRR 167


>gi|224103365|ref|XP_002313027.1| predicted protein [Populus trichocarpa]
 gi|222849435|gb|EEE86982.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 2/92 (2%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           S + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL K    +M  E 
Sbjct: 219 SVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEE 278

Query: 134 KNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQ 165
               + D ++   +  +  K D+   EEK ++
Sbjct: 279 LGDAEMDSNSSSENAAKATKGDMGTSEEKGEE 310


>gi|195119288|ref|XP_002004163.1| GI19763 [Drosophila mojavensis]
 gi|193909231|gb|EDW08098.1| GI19763 [Drosophila mojavensis]
          Length = 578

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 35/62 (56%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           L  RR N  + S   LK WL EH+ N YP+  EK  LA    +T+ QV  WF NARRR+ 
Sbjct: 105 LRKRRGNLPKHSVKILKRWLYEHRYNAYPSDAEKFALAQEANLTVLQVCNWFINARRRIL 164

Query: 125 KE 126
            E
Sbjct: 165 PE 166


>gi|147773525|emb|CAN62866.1| hypothetical protein VITISV_015924 [Vitis vinifera]
          Length = 691

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           S + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL K    +M  E 
Sbjct: 422 SVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEE 481

Query: 134 KNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
               D D ++   +  +  K D+   EE+
Sbjct: 482 IGDADMDSNSSSENAPKATKSDIRASEER 510


>gi|45361609|ref|NP_989382.1| TGFB-induced factor homeobox 1 [Xenopus (Silurana) tropicalis]
 gi|40352841|gb|AAH64716.1| TGFB-induced factor homeobox 1 [Xenopus (Silurana) tropicalis]
 gi|89271326|emb|CAJ82397.1| TG interacting homeobox protein [Xenopus (Silurana) tropicalis]
          Length = 272

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSRQTHLSTLQVCNWFINAR 90

Query: 121 RR-----LKKENKMTWEPKNKTDDDDDAIISDCDEKD 152
           RR     L+K+ K   +P   T     A ISD  + D
Sbjct: 91  RRLLPDMLRKDGK---DPNQFTISRKGAKISDVIQMD 124


>gi|358366569|dbj|GAA83189.1| homeobox protein meis [Aspergillus kawachii IFO 4308]
          Length = 532

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 1/80 (1%)

Query: 52  SNLTAVRYGAGYDLAAR-RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLT 110
           ++ T+V   +G    AR  +  + E+   L++WLN H +NPYPT  EK  LA  T +T  
Sbjct: 54  ADATSVSPDSGPARPARPHQRLSGEAVRALRSWLNNHPENPYPTTQEKDELAQRTGLTRA 113

Query: 111 QVSTWFANARRRLKKENKMT 130
           QVS WF NARRR +    M+
Sbjct: 114 QVSNWFINARRRKRSRGYMS 133


>gi|317419992|emb|CBN82028.1| Homeobox protein TGIF1 [Dicentrarchus labrax]
          Length = 299

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 38/59 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T+++  QV  WF NARRRL  E
Sbjct: 36  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSKQTQLSTLQVCNWFINARRRLLPE 94


>gi|410909225|ref|XP_003968091.1| PREDICTED: homeobox protein TGIF1-like [Takifugu rubripes]
          Length = 318

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 38/59 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T+++  QV  WF NARRRL  E
Sbjct: 59  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSKQTQLSTLQVCNWFINARRRLLPE 117


>gi|260826720|ref|XP_002608313.1| hypothetical protein BRAFLDRAFT_125482 [Branchiostoma floridae]
 gi|229293664|gb|EEN64323.1| hypothetical protein BRAFLDRAFT_125482 [Branchiostoma floridae]
          Length = 345

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +E+   L+AWL +H+ N YPT  EK+ LA    +T+ QV  WF NARRR+
Sbjct: 43  RRGNLPKEAVQILRAWLYDHRYNAYPTDAEKLDLAREAGLTVLQVCNWFINARRRI 98


>gi|356562373|ref|XP_003549446.1| PREDICTED: BEL1-like homeodomain protein 7-like, partial [Glycine
           max]
          Length = 613

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP-- 133
           S + L+AWL EH  +PYP   EKIMLA  T +T  QV+ WF NAR RL       W+P  
Sbjct: 393 SVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTKNQVANWFINARVRL-------WKPMV 445

Query: 134 KNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKGH 173
           +    ++ D   SD   ++  D ++  +   QHH +   H
Sbjct: 446 EEMYKEEFDVQASDNKREESQDNLITVDDSVQHHGLKLDH 485


>gi|327269903|ref|XP_003219732.1| PREDICTED: homeobox protein AKR-like [Anolis carolinensis]
          Length = 267

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 39  RRGNLPKESVQILRGWLYEHRYNAYPSEQEKALLSRQTHLSTLQVCNWFINARRRL 94


>gi|348503428|ref|XP_003439266.1| PREDICTED: homeobox protein AKR-like [Oreochromis niloticus]
          Length = 305

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 38/59 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T+++  QV  WF NARRRL  E
Sbjct: 39  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSKQTQLSTLQVCNWFINARRRLLPE 97


>gi|303318929|ref|XP_003069464.1| Homeobox domain containing protein [Coccidioides posadasii C735
           delta SOWgp]
 gi|240109150|gb|EER27319.1| Homeobox domain containing protein [Coccidioides posadasii C735
           delta SOWgp]
          Length = 565

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 39/56 (69%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
            +  N + ++   LK WL +  ++PYPTK EK  LA  T++T+TQVSTWFANARRR
Sbjct: 71  GKLSNWSEDAVEVLKKWLKQDCRHPYPTKQEKAELAEQTELTVTQVSTWFANARRR 126


>gi|431896314|gb|ELK05730.1| Homeobox protein TGIF1 [Pteropus alecto]
          Length = 290

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 11/110 (10%)

Query: 25  VNISSTKVPALQSRRQLCGIDKQVIQVSNLTA-----------VRYGAGYDLAARRKNAT 73
           +  SS   P+  S R+L    K V+  S               +   AG     RR N  
Sbjct: 2   LGTSSPGAPSPVSERRLMETMKGVVAASGSETEDDDSMDIPLDLSSSAGSGKRRRRGNLP 61

Query: 74  RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 62  KESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 111


>gi|341893625|gb|EGT49560.1| hypothetical protein CAEBREN_28672 [Caenorhabditis brenneri]
          Length = 303

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 46/72 (63%)

Query: 63  YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           YD   +RKN ++++T  L A+   H  +PYPT+ EK +LA+  +++++QV+ WF N R R
Sbjct: 188 YDARRKRKNFSQKATQILNAFFEAHITHPYPTEEEKHVLAMQCEISVSQVANWFGNKRIR 247

Query: 123 LKKENKMTWEPK 134
            KK+ K   E +
Sbjct: 248 FKKQIKNASEER 259


>gi|340714542|ref|XP_003395786.1| PREDICTED: homeobox protein AKR-like isoform 2 [Bombus terrestris]
          Length = 445

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 40/70 (57%)

Query: 57  VRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           V +   + +  RR N  + S   LK WL EH+ N YP+  EK +L+   ++T+ QV  WF
Sbjct: 166 VHHSGNHSVRKRRGNLPKNSVKILKRWLYEHRYNAYPSDSEKQVLSKEAQLTVLQVCNWF 225

Query: 117 ANARRRLKKE 126
            NARRR+  E
Sbjct: 226 INARRRILPE 235


>gi|148234676|ref|NP_001080420.1| TGFB-induced factor homeobox 1 [Xenopus laevis]
 gi|27696456|gb|AAH44016.1| Tgif-prov protein [Xenopus laevis]
          Length = 272

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSRQTHLSTLQVCNWFINAR 90

Query: 121 RR-----LKKENKMTWEPKNKTDDDDDAIISDCDEKD 152
           RR     L+K+ K   +P   T     A ISD  + D
Sbjct: 91  RRLLPDMLRKDGK---DPNQFTISRKGAKISDVIQMD 124


>gi|357618002|gb|EHJ71103.1| putative Homeobox protein PKNOX2 [Danaus plexippus]
          Length = 344

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 39/60 (65%)

Query: 64  DLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           D   +R    R +T  ++AWL +H  +PYPT+ EK  LA  T++TL QV+ WF NARRR+
Sbjct: 233 DEGVKRGVLPRHATQVMRAWLFQHLVHPYPTEEEKRSLAAQTRLTLLQVNNWFINARRRI 292


>gi|158286428|ref|XP_308755.4| AGAP007018-PA [Anopheles gambiae str. PEST]
 gi|157020464|gb|EAA04286.5| AGAP007018-PA [Anopheles gambiae str. PEST]
          Length = 486

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 36/59 (61%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  ++S   LK WL EH+ N YPT  EK+ L+    +T+ QV  WF NARRR+  E
Sbjct: 100 RRGNLPKQSVKILKRWLYEHRFNAYPTDAEKLTLSQEANLTVLQVCNWFINARRRILPE 158


>gi|328876965|gb|EGG25328.1| homeobox transcription factor [Dictyostelium fasciculatum]
          Length = 586

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 39/59 (66%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           L  +R     E+T+ LK WL +H  NPYPT+ EK+ L+  T ++ +Q++ WF NARRR+
Sbjct: 495 LKKKRGKLPGEATSILKNWLYQHNNNPYPTEDEKVDLSQKTLLSSSQINNWFTNARRRI 553


>gi|432105410|gb|ELK31625.1| Homeobox protein TGIF1 [Myotis davidii]
          Length = 345

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 104 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 163

Query: 121 RRL 123
           RRL
Sbjct: 164 RRL 166


>gi|403265263|ref|XP_003924865.1| PREDICTED: homeobox protein TGIF1 isoform 1 [Saimiri boliviensis
           boliviensis]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSSKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|380025144|ref|XP_003696339.1| PREDICTED: uncharacterized protein LOC100870710 [Apis florea]
          Length = 447

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 38/67 (56%)

Query: 57  VRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           V +   + +  RR N  + S   LK WL EH+ N YP+  EK+ L+    +T+ QV  WF
Sbjct: 168 VHHSGTHSVRKRRGNLPKHSVKILKRWLYEHRYNAYPSDSEKLTLSQEANLTVLQVCNWF 227

Query: 117 ANARRRL 123
            NARRR+
Sbjct: 228 INARRRI 234


>gi|330929058|ref|XP_003302504.1| hypothetical protein PTT_14339 [Pyrenophora teres f. teres 0-1]
 gi|311322114|gb|EFQ89405.1| hypothetical protein PTT_14339 [Pyrenophora teres f. teres 0-1]
          Length = 426

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 41/61 (67%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RR N  +E+T  LK W  +++++PYPT+ +K+ L   T ++L QVS WF NARRR  ++ 
Sbjct: 356 RRGNLPKEATNMLKEWFQQNRQSPYPTEDQKLELCNRTGLSLNQVSNWFINARRRAPQKE 415

Query: 128 K 128
           +
Sbjct: 416 Q 416


>gi|189192330|ref|XP_001932504.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187974110|gb|EDU41609.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 422

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 41/61 (67%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RR N  +E+T  LK W  +++++PYPT+ +K+ L   T ++L QVS WF NARRR  ++ 
Sbjct: 352 RRGNLPKEATNMLKEWFQQNRQSPYPTEDQKMELCNRTGLSLNQVSNWFINARRRAPQKE 411

Query: 128 K 128
           +
Sbjct: 412 Q 412


>gi|55846788|gb|AAV67398.1| transforming growth factor-beta-induced factor [Macaca
           fascicularis]
          Length = 245

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 15  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 74

Query: 121 RRL 123
           RRL
Sbjct: 75  RRL 77


>gi|403265265|ref|XP_003924866.1| PREDICTED: homeobox protein TGIF1 isoform 2 [Saimiri boliviensis
           boliviensis]
 gi|403265267|ref|XP_003924867.1| PREDICTED: homeobox protein TGIF1 isoform 3 [Saimiri boliviensis
           boliviensis]
 gi|403265269|ref|XP_003924868.1| PREDICTED: homeobox protein TGIF1 isoform 4 [Saimiri boliviensis
           boliviensis]
 gi|403265271|ref|XP_003924869.1| PREDICTED: homeobox protein TGIF1 isoform 5 [Saimiri boliviensis
           boliviensis]
 gi|403265273|ref|XP_003924870.1| PREDICTED: homeobox protein TGIF1 isoform 6 [Saimiri boliviensis
           boliviensis]
 gi|403265275|ref|XP_003924871.1| PREDICTED: homeobox protein TGIF1 isoform 7 [Saimiri boliviensis
           boliviensis]
          Length = 252

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 11  AGSSKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 70

Query: 121 RRL 123
           RRL
Sbjct: 71  RRL 73


>gi|443922996|gb|ELU42327.1| homeobox KN domain-containing protein [Rhizoctonia solani AG-1 IA]
          Length = 237

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR    +  T TL+ WL  H  +PYPT+ EK ML  +T +TL+QVS W  NARRR+
Sbjct: 38  RRGKLPKHVTETLRTWLLSHADHPYPTEEEKKMLCNVTSLTLSQVSNWMINARRRI 93


>gi|355737582|gb|AES12367.1| TG-interacting factor isoform c [Mustela putorius furo]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGASKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|402902713|ref|XP_003914241.1| PREDICTED: homeobox protein TGIF1-like isoform 3 [Papio anubis]
          Length = 312

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 71  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 130

Query: 121 RRL 123
           RRL
Sbjct: 131 RRL 133


>gi|218193509|gb|EEC75936.1| hypothetical protein OsI_13031 [Oryza sativa Indica Group]
          Length = 675

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRE-STATLKAWLNEHKKNPYPTKGEKIMLA 102
           ID+Q+ Q       +YG     A R +    E S + L+AWL EH  +PYP   EK+MLA
Sbjct: 361 IDQQLRQQRAFQ--QYGLLQQNAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKLMLA 418

Query: 103 IITKMTLTQVSTWFANARRRLKKE--NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDE 160
             T +T +Q+S WF NAR RL K     M  E   + D D ++  SD   ++KD +   E
Sbjct: 419 RQTGLTRSQISNWFINARVRLWKPMIEDMYKEEIGEADLDSNS-SSDNVPRNKDKIATSE 477

Query: 161 EKMKQHHRMVKGHFP 175
           +K      M + + P
Sbjct: 478 DKEDLKSSMSQTYQP 492


>gi|384490285|gb|EIE81507.1| hypothetical protein RO3G_06212 [Rhizopus delemar RA 99-880]
          Length = 215

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 35/53 (66%)

Query: 71  NATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           N  ++ TA LK WL EH  +PYPT  EK  L   T+++L Q+S WF NARRRL
Sbjct: 126 NLPKDVTAVLKEWLKEHSGHPYPTDEEKKSLVEKTQLSLNQISNWFINARRRL 178


>gi|149567768|ref|XP_001510970.1| PREDICTED: homeobox protein TGIF1-like [Ornithorhynchus anatinus]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|119622075|gb|EAX01670.1| TGFB-induced factor (TALE family homeobox), isoform CRA_a [Homo
           sapiens]
          Length = 252

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|225682928|gb|EEH21212.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 416

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)

Query: 44  IDKQVIQVSNLTAVRYGA-GYDLAA----RRKNATRESTATLKAWLNEHKKNPYPTKGEK 98
           +D   +   +L    YGA G  +      RR N  +  T  L+AW +EH  +PYP++ +K
Sbjct: 232 LDYSPVSAGSLNDRNYGAQGEPIDPKNKKRRGNLPKSVTDVLRAWFHEHLDHPYPSEEDK 291

Query: 99  IMLAIITKMTLTQVSTWFANARRR 122
            M    T +T++Q+S WF NARRR
Sbjct: 292 QMFISRTGLTISQISNWFINARRR 315


>gi|350632476|gb|EHA20844.1| hypothetical protein ASPNIDRAFT_126405 [Aspergillus niger ATCC
           1015]
          Length = 264

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 1/84 (1%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR-LKKE 126
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR L   
Sbjct: 176 RRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLTISQISNWFINARRRQLPAL 235

Query: 127 NKMTWEPKNKTDDDDDAIISDCDE 150
                   N  D    +  SD D+
Sbjct: 236 RNQMRNGGNDIDSQRQSPFSDMDQ 259


>gi|324510097|gb|ADY44227.1| Homeobox protein ceh-20 [Ascaris suum]
          Length = 395

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 46/80 (57%)

Query: 64  DLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           D+  +R+N ++++T  L  + + H ++PYP++ EK  LA    +++ QVS WF N R R 
Sbjct: 243 DIRKKRRNFSKDATRILTGFFHSHIEHPYPSEAEKTELARKCNLSVNQVSNWFGNKRIRF 302

Query: 124 KKENKMTWEPKNKTDDDDDA 143
           +K +    +  N T   DDA
Sbjct: 303 RKSHMCYTDDTNSTFGKDDA 322


>gi|380816020|gb|AFE79884.1| homeobox protein TGIF1 isoform c [Macaca mulatta]
 gi|383411419|gb|AFH28923.1| homeobox protein TGIF1 isoform c [Macaca mulatta]
 gi|383411421|gb|AFH28924.1| homeobox protein TGIF1 isoform c [Macaca mulatta]
 gi|384949096|gb|AFI38153.1| homeobox protein TGIF1 isoform c [Macaca mulatta]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|8925856|gb|AAF81643.1|AF179900_1 TALE homeobox TG-interacting factor [Homo sapiens]
 gi|47496613|emb|CAG29329.1| TGIF [Homo sapiens]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|303321846|ref|XP_003070917.1| Homeobox domain containing protein [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110614|gb|EER28772.1| Homeobox domain containing protein [Coccidioides posadasii C735
           delta SOWgp]
          Length = 350

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  + +T  L+AW  EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 259 RRGNLPKPTTDILRAWFYEHLDHPYPSEQDKQMFMTRTGLTISQISNWFINARRR 313


>gi|73962093|ref|XP_547659.2| PREDICTED: homeobox protein TGIF1 isoform 2 [Canis lupus
           familiaris]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGAGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|402902709|ref|XP_003914239.1| PREDICTED: homeobox protein TGIF1-like isoform 1 [Papio anubis]
 gi|402902711|ref|XP_003914240.1| PREDICTED: homeobox protein TGIF1-like isoform 2 [Papio anubis]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|291394147|ref|XP_002713643.1| PREDICTED: TG-interacting factor [Oryctolagus cuniculus]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|355701837|gb|EHH29190.1| hypothetical protein EGK_09549 [Macaca mulatta]
          Length = 286

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 45  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 104

Query: 121 RRL 123
           RRL
Sbjct: 105 RRL 107


>gi|157120552|ref|XP_001653660.1| hypothetical protein AaeL_AAEL009047 [Aedes aegypti]
 gi|108874900|gb|EAT39125.1| AAEL009047-PA [Aedes aegypti]
          Length = 486

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 8/83 (9%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAI 103
           +D + I  +N +A+R         RR N  + S   LK WL EH+ N YP+  EK+ L+ 
Sbjct: 82  MDMEGISPNNQSAIR--------KRRGNLPKHSVKILKRWLYEHRYNAYPSDAEKVTLSQ 133

Query: 104 ITKMTLTQVSTWFANARRRLKKE 126
              +T+ QV  WF NARRR+  E
Sbjct: 134 EANLTVLQVCNWFINARRRILPE 156


>gi|4507473|ref|NP_003235.1| homeobox protein TGIF1 isoform c [Homo sapiens]
 gi|28178849|ref|NP_775300.1| homeobox protein TGIF1 isoform c [Homo sapiens]
 gi|1150426|emb|CAA61897.1| TGIF protein [Homo sapiens]
 gi|12654025|gb|AAH00814.1| TGFB-induced factor homeobox 1 [Homo sapiens]
 gi|119622076|gb|EAX01671.1| TGFB-induced factor (TALE family homeobox), isoform CRA_b [Homo
           sapiens]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|355763588|gb|EHH62194.1| hypothetical protein EGM_20419 [Macaca fascicularis]
          Length = 286

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 45  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 104

Query: 121 RRL 123
           RRL
Sbjct: 105 RRL 107


>gi|149720845|ref|XP_001493188.1| PREDICTED: homeobox protein TGIF1-like isoform 1 [Equus caballus]
 gi|338727877|ref|XP_003365564.1| PREDICTED: homeobox protein TGIF1-like [Equus caballus]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|426385374|ref|XP_004059193.1| PREDICTED: homeobox protein TGIF1 isoform 4 [Gorilla gorilla
           gorilla]
 gi|426385376|ref|XP_004059194.1| PREDICTED: homeobox protein TGIF1 isoform 5 [Gorilla gorilla
           gorilla]
 gi|426385378|ref|XP_004059195.1| PREDICTED: homeobox protein TGIF1 isoform 6 [Gorilla gorilla
           gorilla]
 gi|426385380|ref|XP_004059196.1| PREDICTED: homeobox protein TGIF1 isoform 7 [Gorilla gorilla
           gorilla]
 gi|426385382|ref|XP_004059197.1| PREDICTED: homeobox protein TGIF1 isoform 8 [Gorilla gorilla
           gorilla]
          Length = 252

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 11  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 70

Query: 121 RRL 123
           RRL
Sbjct: 71  RRL 73


>gi|410219220|gb|JAA06829.1| TGFB-induced factor homeobox 1 [Pan troglodytes]
 gi|410251300|gb|JAA13617.1| TGFB-induced factor homeobox 1 [Pan troglodytes]
 gi|410296862|gb|JAA27031.1| TGFB-induced factor homeobox 1 [Pan troglodytes]
 gi|410340549|gb|JAA39221.1| TGFB-induced factor homeobox 1 [Pan troglodytes]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|344269149|ref|XP_003406417.1| PREDICTED: homeobox protein TGIF1-like [Loxodonta africana]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|90082118|dbj|BAE90340.1| unnamed protein product [Macaca fascicularis]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|119196061|ref|XP_001248634.1| hypothetical protein CIMG_02405 [Coccidioides immitis RS]
 gi|392862157|gb|EAS37229.2| hypothetical protein CIMG_02405 [Coccidioides immitis RS]
          Length = 350

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  + +T  L+AW  EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 259 RRGNLPKPTTDILRAWFYEHLDHPYPSEQDKQMFMTRTGLTISQISNWFINARRR 313


>gi|426385368|ref|XP_004059190.1| PREDICTED: homeobox protein TGIF1 isoform 1 [Gorilla gorilla
           gorilla]
          Length = 272

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|349603650|gb|AEP99433.1| Homeobox protein TGIF1-like protein, partial [Equus caballus]
          Length = 267

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 26  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 85

Query: 121 RRL 123
           RRL
Sbjct: 86  RRL 88


>gi|28178845|ref|NP_775299.1| homeobox protein TGIF1 isoform b [Homo sapiens]
 gi|158255660|dbj|BAF83801.1| unnamed protein product [Homo sapiens]
          Length = 286

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 45  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 104

Query: 121 RRL 123
           RRL
Sbjct: 105 RRL 107


>gi|330827596|ref|XP_003291859.1| hypothetical protein DICPUDRAFT_39700 [Dictyostelium purpureum]
 gi|325077920|gb|EGC31601.1| hypothetical protein DICPUDRAFT_39700 [Dictyostelium purpureum]
          Length = 130

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 60  GAGYDLAARRKNAT--RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           G G +   R+K      E+T+ LK WL EH  +PYPT+ EK+ LA  T ++  Q++ WF 
Sbjct: 43  GDGSNGLKRKKRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTSLSFNQINNWFT 102

Query: 118 NARRRL 123
           NARRR+
Sbjct: 103 NARRRI 108


>gi|426385372|ref|XP_004059192.1| PREDICTED: homeobox protein TGIF1 isoform 3 [Gorilla gorilla
           gorilla]
          Length = 286

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 45  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 104

Query: 121 RRL 123
           RRL
Sbjct: 105 RRL 107


>gi|28178851|ref|NP_775301.1| homeobox protein TGIF1 isoform d [Homo sapiens]
 gi|28178853|ref|NP_775302.1| homeobox protein TGIF1 isoform d [Homo sapiens]
 gi|28178855|ref|NP_775303.1| homeobox protein TGIF1 isoform d [Homo sapiens]
 gi|28178857|ref|NP_777480.1| homeobox protein TGIF1 isoform d [Homo sapiens]
 gi|119622077|gb|EAX01672.1| TGFB-induced factor (TALE family homeobox), isoform CRA_c [Homo
           sapiens]
          Length = 252

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 11  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 70

Query: 121 RRL 123
           RRL
Sbjct: 71  RRL 73


>gi|332225831|ref|XP_003262087.1| PREDICTED: homeobox protein TGIF1 isoform 3 [Nomascus leucogenys]
 gi|332225835|ref|XP_003262089.1| PREDICTED: homeobox protein TGIF1 isoform 5 [Nomascus leucogenys]
 gi|332225837|ref|XP_003262090.1| PREDICTED: homeobox protein TGIF1 isoform 6 [Nomascus leucogenys]
 gi|332225841|ref|XP_003262092.1| PREDICTED: homeobox protein TGIF1 isoform 8 [Nomascus leucogenys]
          Length = 252

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 11  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 70

Query: 121 RRL 123
           RRL
Sbjct: 71  RRL 73


>gi|332225827|ref|XP_003262085.1| PREDICTED: homeobox protein TGIF1 isoform 1 [Nomascus leucogenys]
 gi|332225829|ref|XP_003262086.1| PREDICTED: homeobox protein TGIF1 isoform 2 [Nomascus leucogenys]
          Length = 272

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|126153769|emb|CAM35470.1| TGFB-induced factor homeobox 1 [Ovis aries]
          Length = 272

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|157120550|ref|XP_001653659.1| hypothetical protein AaeL_AAEL009047 [Aedes aegypti]
 gi|108874899|gb|EAT39124.1| AAEL009047-PB [Aedes aegypti]
          Length = 501

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 8/83 (9%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAI 103
           +D + I  +N +A+R         RR N  + S   LK WL EH+ N YP+  EK+ L+ 
Sbjct: 82  MDMEGISPNNQSAIR--------KRRGNLPKHSVKILKRWLYEHRYNAYPSDAEKVTLSQ 133

Query: 104 ITKMTLTQVSTWFANARRRLKKE 126
              +T+ QV  WF NARRR+  E
Sbjct: 134 EANLTVLQVCNWFINARRRILPE 156


>gi|426253739|ref|XP_004020550.1| PREDICTED: homeobox protein TGIF1 [Ovis aries]
          Length = 252

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 11  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 70

Query: 121 RRL 123
           RRL
Sbjct: 71  RRL 73


>gi|410251304|gb|JAA13619.1| TGFB-induced factor homeobox 1 [Pan troglodytes]
          Length = 286

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 45  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 104

Query: 121 RRL 123
           RRL
Sbjct: 105 RRL 107


>gi|190360733|ref|NP_001121971.1| homeobox protein TGIF1 [Bos taurus]
 gi|127801596|gb|AAI03303.2| TGIF1 protein [Bos taurus]
 gi|296473678|tpg|DAA15793.1| TPA: TGFB-induced factor homeobox 1 [Bos taurus]
          Length = 252

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 11  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 70

Query: 121 RRL 123
           RRL
Sbjct: 71  RRL 73


>gi|328791114|ref|XP_001122713.2| PREDICTED: hypothetical protein LOC726999 [Apis mellifera]
          Length = 320

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 39/70 (55%)

Query: 57  VRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           V +   + +  RR N  + S   LK WL EH+ N YP+  EK+ L+    +T+ QV  WF
Sbjct: 41  VHHSGTHSVRKRRGNLPKHSVKILKRWLYEHRYNAYPSDSEKLTLSQEANLTVLQVCNWF 100

Query: 117 ANARRRLKKE 126
            NARRR+  E
Sbjct: 101 INARRRILPE 110


>gi|345803353|ref|XP_003435050.1| PREDICTED: homeobox protein TGIF1 isoform 1 [Canis lupus
           familiaris]
          Length = 252

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 11  AGAGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 70

Query: 121 RRL 123
           RRL
Sbjct: 71  RRL 73


>gi|194214559|ref|XP_001493210.2| PREDICTED: homeobox protein TGIF1-like isoform 2 [Equus caballus]
 gi|338727879|ref|XP_003365565.1| PREDICTED: homeobox protein TGIF1-like [Equus caballus]
 gi|338727881|ref|XP_003365566.1| PREDICTED: homeobox protein TGIF1-like [Equus caballus]
 gi|338727883|ref|XP_003365567.1| PREDICTED: homeobox protein TGIF1-like [Equus caballus]
          Length = 252

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 11  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 70

Query: 121 RRL 123
           RRL
Sbjct: 71  RRL 73


>gi|332225843|ref|XP_003262093.1| PREDICTED: homeobox protein TGIF1 isoform 9 [Nomascus leucogenys]
          Length = 275

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 34  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 93

Query: 121 RRL 123
           RRL
Sbjct: 94  RRL 96


>gi|327271678|ref|XP_003220614.1| PREDICTED: homeobox protein TGIF2-like [Anolis carolinensis]
          Length = 252

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 37/56 (66%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 25  RRGNLPKESVKILREWLYEHRFNAYPSEQEKLSLSGQTSLSVLQICNWFINARRRL 80


>gi|334145781|gb|AEG64814.1| transforming growth factor [Macropus eugenii]
          Length = 269

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 28  AGSGKRRRRGNLPKESVQILRDWLYEHRFNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 87

Query: 121 RRL 123
           RRL
Sbjct: 88  RRL 90


>gi|332225833|ref|XP_003262088.1| PREDICTED: homeobox protein TGIF1 isoform 4 [Nomascus leucogenys]
          Length = 286

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 45  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 104

Query: 121 RRL 123
           RRL
Sbjct: 105 RRL 107


>gi|395511672|ref|XP_003760079.1| PREDICTED: homeobox protein TGIF1 isoform 1 [Sarcophilus harrisii]
          Length = 272

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRFNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|395511674|ref|XP_003760080.1| PREDICTED: homeobox protein TGIF1 isoform 2 [Sarcophilus harrisii]
          Length = 272

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRFNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|119500492|ref|XP_001267003.1| homeobox transcription factor, putative [Neosartorya fischeri NRRL
           181]
 gi|119415168|gb|EAW25106.1| homeobox transcription factor, putative [Neosartorya fischeri NRRL
           181]
          Length = 357

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 251 RRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLTISQISNWFINARRR 305


>gi|170044736|ref|XP_001849992.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167867767|gb|EDS31150.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 466

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 35/59 (59%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  + S   LK WL EH+ N YP+  EK+ L+    +T+ QV  WF NARRR+  E
Sbjct: 59  RRGNLPKHSVKILKRWLYEHRYNAYPSDAEKVTLSQEANLTVLQVCNWFINARRRILPE 117


>gi|449493988|ref|XP_004175272.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein AKR-like
           [Taeniopygia guttata]
          Length = 269

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSRQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|449272457|gb|EMC82374.1| Homeobox protein AKR, partial [Columba livia]
          Length = 266

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 28  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSRQTHLSTLQVCNWFINAR 87

Query: 121 RRL 123
           RRL
Sbjct: 88  RRL 90


>gi|297722441|ref|NP_001173584.1| Os03g0680700 [Oryza sativa Japonica Group]
 gi|12656813|gb|AAK00974.1|AC079736_14 putative homeodomain protein [Oryza sativa Japonica Group]
 gi|108710416|gb|ABF98211.1| Associated with HOX family protein [Oryza sativa Japonica Group]
 gi|255674784|dbj|BAH92312.1| Os03g0680700 [Oryza sativa Japonica Group]
          Length = 346

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%)

Query: 75  ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           ++   L+AWL +H  +PYP   EK+MLA+ T ++ TQ+S WF NAR RL K
Sbjct: 269 DAVGVLRAWLFDHFLHPYPNDNEKLMLAVATGLSRTQISNWFINARVRLWK 319


>gi|297275019|ref|XP_001083016.2| PREDICTED: homeobox protein TGIF1 isoform 3 [Macaca mulatta]
          Length = 399

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 8/92 (8%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 158 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 217

Query: 121 RR-----LKKENKMTWEPKNKTDDDDDAIISD 147
           RR     L+K+ K   +P   T     A ISD
Sbjct: 218 RRLLPDMLRKDGK---DPNQFTISRRGAKISD 246


>gi|195170340|ref|XP_002025971.1| GL10213 [Drosophila persimilis]
 gi|194110835|gb|EDW32878.1| GL10213 [Drosophila persimilis]
          Length = 557

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 34/59 (57%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           L  RR N  + S   LK WL EH+ N YP+  EK  LA    +T+ QV  WF NARRR+
Sbjct: 110 LRKRRGNLPKHSVKILKRWLYEHRYNAYPSDAEKFTLAQEASLTVLQVCNWFINARRRI 168


>gi|261193154|ref|XP_002622983.1| AhpA [Ajellomyces dermatitidis SLH14081]
 gi|239589118|gb|EEQ71761.1| AhpA [Ajellomyces dermatitidis SLH14081]
 gi|239613688|gb|EEQ90675.1| AhpA [Ajellomyces dermatitidis ER-3]
 gi|327352551|gb|EGE81408.1| AhpA protein [Ajellomyces dermatitidis ATCC 18188]
          Length = 352

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 262 RRGNLPKSVTDVLRAWFHEHLDHPYPSEEDKQMFISRTGLTISQISNWFINARRR 316


>gi|396501252|ref|XP_003845939.1| hypothetical protein LEMA_P012470.1 [Leptosphaeria maculans JN3]
 gi|312222520|emb|CBY02460.1| hypothetical protein LEMA_P012470.1 [Leptosphaeria maculans JN3]
          Length = 458

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 40/61 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RR N  +E+T  LK W   ++ +PYPT+ +K+ML   T +++ QVS WF NARRR  ++ 
Sbjct: 388 RRGNLPKEATNILKEWFAANRASPYPTEEQKLMLCNRTTLSINQVSNWFINARRRAPQKE 447

Query: 128 K 128
           +
Sbjct: 448 Q 448


>gi|198460968|ref|XP_001361862.2| GA21345 [Drosophila pseudoobscura pseudoobscura]
 gi|198137194|gb|EAL26441.2| GA21345 [Drosophila pseudoobscura pseudoobscura]
          Length = 557

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 35/62 (56%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           L  RR N  + S   LK WL EH+ N YP+  EK  LA    +T+ QV  WF NARRR+ 
Sbjct: 110 LRKRRGNLPKHSVKILKRWLYEHRYNAYPSDAEKFTLAQEASLTVLQVCNWFINARRRIL 169

Query: 125 KE 126
            E
Sbjct: 170 PE 171


>gi|1495714|emb|CAA61896.1| mTGIF protein [Mus musculus]
          Length = 272

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           A   +  RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 31  AASGMRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|340714540|ref|XP_003395785.1| PREDICTED: homeobox protein AKR-like isoform 1 [Bombus terrestris]
          Length = 320

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 40/70 (57%)

Query: 57  VRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           V +   + +  RR N  + S   LK WL EH+ N YP+  EK +L+   ++T+ QV  WF
Sbjct: 41  VHHSGNHSVRKRRGNLPKNSVKILKRWLYEHRYNAYPSDSEKQVLSKEAQLTVLQVCNWF 100

Query: 117 ANARRRLKKE 126
            NARRR+  E
Sbjct: 101 INARRRILPE 110


>gi|149036281|gb|EDL90940.1| TG interacting factor, isoform CRA_b [Rattus norvegicus]
          Length = 273

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 39  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 94


>gi|121707605|ref|XP_001271887.1| homeobox transcription factor, putative [Aspergillus clavatus NRRL
           1]
 gi|119400035|gb|EAW10461.1| homeobox transcription factor, putative [Aspergillus clavatus NRRL
           1]
          Length = 355

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 254 RRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLTISQISNWFINARRR 308


>gi|237649076|ref|NP_001153689.1| vismay [Tribolium castaneum]
 gi|270010244|gb|EFA06692.1| hypothetical protein TcasGA2_TC009623 [Tribolium castaneum]
          Length = 302

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 47  QVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITK 106
           Q++Q++NL  +          RR N  + S   LK WL EH+ N YP+  EK+ L+    
Sbjct: 34  QLMQIANLNNLSVEP---TRKRRGNLPKHSVKILKRWLYEHRYNAYPSDAEKMTLSQEAN 90

Query: 107 MTLTQVSTWFANARRRLKKE 126
           +T+ QV  WF NARRR+  E
Sbjct: 91  LTVLQVCNWFINARRRILPE 110


>gi|71003940|ref|XP_756636.1| hypothetical protein UM00489.1 [Ustilago maydis 521]
 gi|46095576|gb|EAK80809.1| hypothetical protein UM00489.1 [Ustilago maydis 521]
          Length = 957

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/56 (51%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR    +  T  LK WL EH  +PYPT+ EK  L  +T +TL+QVS WF NARRR+
Sbjct: 871 RRGKLPKPVTDLLKTWLLEHASHPYPTEDEKRSLCSMTGLTLSQVSNWFINARRRI 926


>gi|149036280|gb|EDL90939.1| TG interacting factor, isoform CRA_a [Rattus norvegicus]
          Length = 272

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 38  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93


>gi|15223627|ref|NP_173400.1| BEL1-like homeodomain 10 [Arabidopsis thaliana]
 gi|238478551|ref|NP_001154352.1| BEL1-like homeodomain 10 [Arabidopsis thaliana]
 gi|334182699|ref|NP_001185040.1| BEL1-like homeodomain 10 [Arabidopsis thaliana]
 gi|75263155|sp|Q9FXG8.1|BLH10_ARATH RecName: Full=BEL1-like homeodomain protein 10; Short=BEL1-like
           protein 10
 gi|10086497|gb|AAG12557.1|AC007797_17 Similar to homeodomain proteins [Arabidopsis thaliana]
 gi|45827244|gb|AAS78200.1| BEL1-like homeodomain 5 protein [Arabidopsis thaliana]
 gi|332191763|gb|AEE29884.1| BEL1-like homeodomain 10 [Arabidopsis thaliana]
 gi|332191764|gb|AEE29885.1| BEL1-like homeodomain 10 [Arabidopsis thaliana]
 gi|332191765|gb|AEE29886.1| BEL1-like homeodomain 10 [Arabidopsis thaliana]
          Length = 538

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 13/82 (15%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP-- 133
           S + L+AWL EH  +PYP + EKIMLA  T ++  QV+ WF NAR RL       W+P  
Sbjct: 362 SVSVLRAWLFEHFLHPYPKESEKIMLAKQTGLSKNQVANWFINARVRL-------WKPMI 414

Query: 134 ----KNKTDDDDDAIISDCDEK 151
               K +  D+ + +IS   ++
Sbjct: 415 EEMYKEEFGDESELLISKSSQE 436


>gi|345325247|ref|XP_001508607.2| PREDICTED: homeobox protein TGIF2-like [Ornithorhynchus anatinus]
          Length = 249

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 37/56 (66%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 25  RRGNLPKESVKILRDWLYEHRFNAYPSEQEKLSLSGQTSLSVLQICNWFINARRRL 80


>gi|332018520|gb|EGI59110.1| Homeobox protein TGIF1 [Acromyrmex echinatior]
          Length = 376

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 9/80 (11%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAI 103
           ++++ +   N T  R         RR N  +E+   LK WL+EHK N YP   EK  L+ 
Sbjct: 74  VNRRAVAAQNATGRR---------RRGNLPKEAVNILKRWLSEHKFNAYPNDIEKETLSS 124

Query: 104 ITKMTLTQVSTWFANARRRL 123
            T +T+ QV  WF NARRR+
Sbjct: 125 QTSLTIMQVCNWFINARRRI 144


>gi|295913366|gb|ADG57936.1| transcription factor [Lycoris longituba]
          Length = 124

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           S + L+AWL EH  +PYP   EK+MLA  T +T  QVS WF NAR RL K    +M  E 
Sbjct: 36  SVSVLRAWLFEHFLHPYPNDSEKLMLARQTGLTRGQVSNWFINARVRLWKPMVEEMYKEE 95

Query: 134 KNKTDDDDDAIISDCDEKDKDD 155
             +T+ D ++   +   K +D+
Sbjct: 96  FGETEMDSNSSSENAAPKGRDE 117


>gi|281345009|gb|EFB20593.1| hypothetical protein PANDA_017378 [Ailuropoda melanoleuca]
          Length = 267

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 33  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 88


>gi|297850362|ref|XP_002893062.1| hypothetical protein ARALYDRAFT_472196 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338904|gb|EFH69321.1| hypothetical protein ARALYDRAFT_472196 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 531

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 13/82 (15%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP-- 133
           S + L+AWL EH  +PYP + EKIMLA  T ++  QV+ WF NAR RL       W+P  
Sbjct: 357 SVSVLRAWLFEHFLHPYPKESEKIMLAKQTGLSKNQVANWFINARVRL-------WKPMI 409

Query: 134 ----KNKTDDDDDAIISDCDEK 151
               K +  D+ + +IS   ++
Sbjct: 410 EEMYKEEFGDESELLISKSSQE 431


>gi|125587480|gb|EAZ28144.1| hypothetical protein OsJ_12118 [Oryza sativa Japonica Group]
          Length = 346

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%)

Query: 75  ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           ++   L+AWL +H  +PYP   EK+MLA+ T ++ TQ+S WF NAR RL K
Sbjct: 269 DAVGVLRAWLFDHFLHPYPNDNEKLMLAVATGLSRTQISNWFINARVRLWK 319


>gi|31982825|ref|NP_033398.2| homeobox protein TGIF1 isoform b [Mus musculus]
 gi|27808680|sp|P70284.2|TGIF1_MOUSE RecName: Full=Homeobox protein TGIF1; AltName:
           Full=5'-TG-3'-interacting factor 1
 gi|13543096|gb|AAH05724.1| TGFB-induced factor homeobox 1 [Mus musculus]
 gi|148706417|gb|EDL38364.1| TG interacting factor, isoform CRA_b [Mus musculus]
          Length = 272

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 38  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93


>gi|125545267|gb|EAY91406.1| hypothetical protein OsI_13030 [Oryza sativa Indica Group]
          Length = 345

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%)

Query: 75  ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           ++   L+AWL +H  +PYP   EK+MLA+ T ++ TQ+S WF NAR RL K
Sbjct: 268 DAVGVLRAWLFDHFLHPYPNDNEKLMLAVATGLSRTQISNWFINARVRLWK 318


>gi|115454607|ref|NP_001050904.1| Os03g0680800 [Oryza sativa Japonica Group]
 gi|57164488|gb|AAW34245.1| putative homeodomain protein [Oryza sativa Japonica Group]
 gi|108710418|gb|ABF98213.1| Associated with HOX family protein, expressed [Oryza sativa
           Japonica Group]
 gi|113549375|dbj|BAF12818.1| Os03g0680800 [Oryza sativa Japonica Group]
 gi|215695482|dbj|BAG90673.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625563|gb|EEE59695.1| hypothetical protein OsJ_12119 [Oryza sativa Japonica Group]
          Length = 675

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRE-STATLKAWLNEHKKNPYPTKGEKIMLA 102
           ID+Q+ Q       +YG     A R +    E S + L+AWL EH  +PYP   EK+MLA
Sbjct: 361 IDQQLRQQRAFQ--QYGLLQQNAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKLMLA 418

Query: 103 IITKMTLTQVSTWFANARRRLKKE--NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDE 160
             T +T +Q+S WF NAR RL K     M  E   + D D ++  SD   + KD +   E
Sbjct: 419 RQTGLTRSQISNWFINARVRLWKPMIEDMYKEEIGEADLDSNS-SSDNVPRSKDKIATSE 477

Query: 161 EKMKQHHRMVKGHFP 175
           +K      M + + P
Sbjct: 478 DKEDLKSSMSQTYQP 492


>gi|414879706|tpg|DAA56837.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           [Zea mays]
          Length = 311

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 41/67 (61%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS WF N
Sbjct: 60  FGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFIN 119

Query: 119 ARRRLKK 125
           AR RL K
Sbjct: 120 ARVRLWK 126


>gi|295913630|gb|ADG58059.1| transcription factor [Lycoris longituba]
          Length = 236

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           S + L+AWL EH  +PYP   EK+MLA  T +T  QVS WF NAR RL K    +M  E 
Sbjct: 41  SVSVLRAWLFEHFLHPYPNDTEKLMLARQTGLTRGQVSNWFINARVRLWKPMVEEMYKEE 100

Query: 134 KNKTDDDDDAIISDCDEKDKDD 155
             +T+ D ++   +   K +D+
Sbjct: 101 FGETEMDSNSSSENAAPKGRDE 122


>gi|324513759|gb|ADY45639.1| Homeobox protein ceh-20 [Ascaris suum]
          Length = 276

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 5/119 (4%)

Query: 30  TKVPALQSRRQLC----GIDKQVIQVSNLTAVRYGAGY-DLAARRKNATRESTATLKAWL 84
           T+    + R ++C    G   Q+ Q++    +   + Y D+  +R+N ++++T  L  + 
Sbjct: 85  TQADIEKCRYEICTKVDGYQNQLKQLTCQKIMMLRSRYLDIRKKRRNFSKDATRILTGFF 144

Query: 85  NEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDA 143
           + H ++PYP++ EK  LA    +++ QVS WF N R R +K +    +  N T   DDA
Sbjct: 145 HSHIEHPYPSEAEKTELARKCNLSVNQVSNWFGNKRIRFRKSHMCYTDDTNSTFGKDDA 203


>gi|148706416|gb|EDL38363.1| TG interacting factor, isoform CRA_a [Mus musculus]
          Length = 271

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 37  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 92


>gi|414879705|tpg|DAA56836.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           [Zea mays]
          Length = 587

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 41/67 (61%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS WF N
Sbjct: 336 FGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFIN 395

Query: 119 ARRRLKK 125
           AR RL K
Sbjct: 396 ARVRLWK 402


>gi|301784361|ref|XP_002927593.1| PREDICTED: homeobox protein TGIF1-like [Ailuropoda melanoleuca]
          Length = 272

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 38  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93


>gi|255930359|ref|XP_002556739.1| Pc06g01320 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581352|emb|CAP79125.1| Pc06g01320 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 846

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/52 (50%), Positives = 37/52 (71%)

Query: 73  TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           +R++   LK WL +H +NPYPT+ E+  L  +T +T TQ++ WFANARRR K
Sbjct: 169 SRKAINILKGWLRDHNENPYPTEQERDDLKQLTGLTRTQIANWFANARRRGK 220


>gi|414871946|tpg|DAA50503.1| TPA: knotted interacting protein1 [Zea mays]
          Length = 263

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 11/79 (13%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP-- 133
           S A L+AWL +H  +PYP  GEK+ LA+ T ++  Q+S WF NAR RL       W+P  
Sbjct: 182 SVAVLRAWLFDHFLHPYPNDGEKLRLAVTTGLSRRQISNWFINARVRL-------WKPMI 234

Query: 134 --KNKTDDDDDAIISDCDE 150
               K +  D + +S  D+
Sbjct: 235 EEMYKDEFSDGSAVSSYDD 253


>gi|346716118|ref|NP_001231217.1| homeobox protein TGIF1 isoform c [Sus scrofa]
 gi|346716120|ref|NP_001231218.1| homeobox protein TGIF1 isoform c [Sus scrofa]
          Length = 273

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 39  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 94


>gi|410977383|ref|XP_003995085.1| PREDICTED: homeobox protein TGIF1 [Felis catus]
          Length = 272

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 38  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93


>gi|317144684|ref|XP_003189620.1| homeobox transcription factor [Aspergillus oryzae RIB40]
          Length = 317

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 218 RRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLTISQISNWFINARRR 272


>gi|149036282|gb|EDL90941.1| TG interacting factor, isoform CRA_c [Rattus norvegicus]
          Length = 295

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 61  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 116


>gi|255760001|ref|NP_001157547.1| homeobox protein TGIF1 isoform a [Mus musculus]
 gi|148706418|gb|EDL38365.1| TG interacting factor, isoform CRA_c [Mus musculus]
          Length = 305

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 71  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 126


>gi|378731713|gb|EHY58172.1| hypothetical protein HMPREF1120_06185 [Exophiala dermatitidis
           NIH/UT8656]
          Length = 384

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  R+ T  L+AW +EH  +PYPT+ +K      T +T+ Q+S WF NARRR
Sbjct: 292 RRGNLPRQITDILRAWFHEHLDHPYPTEEDKQAFMARTGLTIAQISNWFINARRR 346


>gi|354499683|ref|XP_003511937.1| PREDICTED: homeobox protein TGIF1-like isoform 1 [Cricetulus
           griseus]
          Length = 272

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 38  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93


>gi|195401386|ref|XP_002059294.1| GJ18217 [Drosophila virilis]
 gi|194142300|gb|EDW58706.1| GJ18217 [Drosophila virilis]
          Length = 501

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 34/59 (57%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           L  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF NARRR+
Sbjct: 105 LRKRRGNLPKHSVKILKRWLYEHRYNAYPSDAEKFALSQEANLTVLQVCNWFINARRRI 163


>gi|195582781|ref|XP_002081204.1| GD25834 [Drosophila simulans]
 gi|194193213|gb|EDX06789.1| GD25834 [Drosophila simulans]
          Length = 535

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           L  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF NARRR+ 
Sbjct: 91  LRKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRIL 150

Query: 125 KE 126
            E
Sbjct: 151 PE 152


>gi|194752742|ref|XP_001958678.1| GF12447 [Drosophila ananassae]
 gi|190619976|gb|EDV35500.1| GF12447 [Drosophila ananassae]
          Length = 580

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           L  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF NARRR+ 
Sbjct: 109 LRKRRGNLPKHSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRIL 168

Query: 125 KE 126
            E
Sbjct: 169 PE 170


>gi|295913586|gb|ADG58039.1| transcription factor [Lycoris longituba]
          Length = 209

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 2/88 (2%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           S + L+AWL EH  +PYP   EK+MLA  T +T  QVS WF NAR RL K    +M  E 
Sbjct: 42  SVSVLRAWLFEHFLHPYPNDSEKLMLARQTGLTRGQVSNWFINARVRLWKPMVEEMYKEE 101

Query: 134 KNKTDDDDDAIISDCDEKDKDDLMMDEE 161
             +T+ D ++   +   K +D+    E+
Sbjct: 102 FGETEMDSNSSSENAAPKGRDETRSSED 129


>gi|295913473|gb|ADG57986.1| transcription factor [Lycoris longituba]
          Length = 183

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 2/88 (2%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           S + L+AWL EH  +PYP   EK+MLA  T +T  QVS WF NAR RL K    +M  E 
Sbjct: 41  SVSVLRAWLFEHFLHPYPNDSEKLMLARQTGLTRGQVSNWFINARVRLWKPMVEEMYKEE 100

Query: 134 KNKTDDDDDAIISDCDEKDKDDLMMDEE 161
             +T+ D ++   +   K +D+    E+
Sbjct: 101 FGETEMDSNSSSENAAPKGRDETRSSED 128


>gi|70993936|ref|XP_751815.1| homeobox transcription factor [Aspergillus fumigatus Af293]
 gi|66849449|gb|EAL89777.1| homeobox transcription factor, putative [Aspergillus fumigatus
           Af293]
          Length = 274

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 176 RRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLTISQISNWFINARRR 230


>gi|62543527|ref|NP_001015020.1| TGFB-induced factor homeobox 1 [Rattus norvegicus]
 gi|60688321|gb|AAH91264.1| TGFB-induced factor homeobox 1 [Rattus norvegicus]
 gi|117558273|gb|AAI27462.1| TGFB-induced factor homeobox 1 [Rattus norvegicus]
          Length = 287

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 53  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 108


>gi|258406680|gb|ACV72063.1| TGIF2 [Macropus eugenii]
          Length = 252

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 37/56 (66%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 25  RRGNLPKESVKILRDWLYEHRFNAYPSEQEKLSLSGQTSLSVLQICNWFINARRRL 80


>gi|296222292|ref|XP_002757126.1| PREDICTED: homeobox protein TGIF1-like isoform 1 [Callithrix
           jacchus]
          Length = 272

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 38  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93


>gi|395749722|ref|XP_003778995.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein TGIF1-like [Pongo
           abelii]
          Length = 400

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 159 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 218

Query: 121 RRL 123
           RRL
Sbjct: 219 RRL 221


>gi|238485764|ref|XP_002374120.1| homeobox transcription factor, putative [Aspergillus flavus
           NRRL3357]
 gi|220698999|gb|EED55338.1| homeobox transcription factor, putative [Aspergillus flavus
           NRRL3357]
          Length = 250

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 151 RRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLTISQISNWFINARRR 205


>gi|195485308|ref|XP_002091038.1| GE13442 [Drosophila yakuba]
 gi|194177139|gb|EDW90750.1| GE13442 [Drosophila yakuba]
          Length = 566

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           L  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF NARRR+ 
Sbjct: 105 LRKRRGNLPKHSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRIL 164

Query: 125 KE 126
            E
Sbjct: 165 PE 166


>gi|162463376|ref|NP_001105184.1| knotted interacting protein1 [Zea mays]
 gi|19743685|gb|AAL92498.1| knotted1-interacting protein [Zea mays]
          Length = 359

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           S A L+AWL +H  +PYP  GEK+ LA+ T ++  Q+S WF NAR RL K
Sbjct: 278 SVAVLRAWLFDHFLHPYPNDGEKLRLAVTTGLSRRQISNWFINARVRLWK 327


>gi|159125268|gb|EDP50385.1| homeobox transcription factor, putative [Aspergillus fumigatus
           A1163]
          Length = 274

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 176 RRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLTISQISNWFINARRR 230


>gi|451847052|gb|EMD60360.1| hypothetical protein COCSADRAFT_98610 [Cochliobolus sativus ND90Pr]
          Length = 387

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 4/80 (5%)

Query: 57  VRYGAGYDLAA----RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQV 112
            ++  G D +A    RR N  +E+T  LK W   ++++PYPT+ +K+ L   T ++L QV
Sbjct: 302 FQHNVGLDHSAFNRKRRGNLPKEATNLLKDWFAANRQSPYPTEDQKMELCNRTGLSLNQV 361

Query: 113 STWFANARRRLKKENKMTWE 132
           S WF NARRR  ++ +   E
Sbjct: 362 SNWFINARRRAPQKEQRERE 381


>gi|395858628|ref|XP_003801666.1| PREDICTED: homeobox protein TGIF1 isoform 1 [Otolemur garnettii]
          Length = 272

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 38  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93


>gi|115492373|ref|XP_001210814.1| hypothetical protein ATEG_00728 [Aspergillus terreus NIH2624]
 gi|114197674|gb|EAU39374.1| hypothetical protein ATEG_00728 [Aspergillus terreus NIH2624]
          Length = 311

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 213 RRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLTISQISNWFINARRR 267


>gi|255759999|ref|NP_001157546.1| homeobox protein TGIF1 isoform c [Mus musculus]
 gi|255760003|ref|NP_001157548.1| homeobox protein TGIF1 isoform c [Mus musculus]
 gi|255760005|ref|NP_001157549.1| homeobox protein TGIF1 isoform c [Mus musculus]
 gi|15215201|gb|AAH12700.1| Tgif1 protein [Mus musculus]
 gi|74227669|dbj|BAE35685.1| unnamed protein product [Mus musculus]
          Length = 252

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 18  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 73


>gi|410251302|gb|JAA13618.1| TGFB-induced factor homeobox 1 [Pan troglodytes]
          Length = 401

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 160 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 219

Query: 121 RRL 123
           RRL
Sbjct: 220 RRL 222


>gi|57528478|ref|NP_001009815.1| homeobox protein TGIF1 [Pan troglodytes]
 gi|397494137|ref|XP_003817944.1| PREDICTED: homeobox protein TGIF1-like [Pan paniscus]
 gi|61216394|sp|Q5IS58.1|TGIF1_PANTR RecName: Full=Homeobox protein TGIF1; AltName:
           Full=5'-TG-3'-interacting factor 1
 gi|56122314|gb|AAV74308.1| transforming growth factor-beta-induced factor [Pan troglodytes]
 gi|410296864|gb|JAA27032.1| TGFB-induced factor homeobox 1 [Pan troglodytes]
          Length = 401

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 160 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 219

Query: 121 RRL 123
           RRL
Sbjct: 220 RRL 222


>gi|346716122|ref|NP_001231219.1| homeobox protein TGIF1 isoform d [Sus scrofa]
          Length = 253

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 19  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 74


>gi|326427937|gb|EGD73507.1| hypothetical protein PTSG_05211 [Salpingoeca sp. ATCC 50818]
          Length = 582

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +R N  + +T  LKAWL +H  +PYPT  EK  +A    +++TQV+ WF NARRRL
Sbjct: 194 KRSNLPKSTTNMLKAWLFDHHHHPYPTDVEKRDMATKFNLSMTQVNNWFINARRRL 249


>gi|22658434|gb|AAH31268.1| TGFB-induced factor homeobox 1 [Homo sapiens]
 gi|123981320|gb|ABM82489.1| TGFB-induced factor (TALE family homeobox) [synthetic construct]
 gi|123996151|gb|ABM85677.1| TGFB-induced factor (TALE family homeobox) [synthetic construct]
          Length = 401

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 160 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 219

Query: 121 RRL 123
           RRL
Sbjct: 220 RRL 222


>gi|395858630|ref|XP_003801667.1| PREDICTED: homeobox protein TGIF1 isoform 2 [Otolemur garnettii]
          Length = 337

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 103 RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 158


>gi|22026800|ref|NP_523714.2| vismay, isoform A [Drosophila melanogaster]
 gi|16185941|gb|AAL13979.1| SD01238p [Drosophila melanogaster]
 gi|21627408|gb|AAG22280.2| vismay, isoform A [Drosophila melanogaster]
 gi|220942292|gb|ACL83689.1| vis-PA [synthetic construct]
 gi|220952504|gb|ACL88795.1| vis-PA [synthetic construct]
          Length = 424

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           L  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF NARRR+ 
Sbjct: 91  LRKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRIL 150

Query: 125 KE 126
            E
Sbjct: 151 PE 152


>gi|260183698|gb|ACX35971.1| bell-like homeodomain protein [Hordeum vulgare subsp. vulgare]
          Length = 608

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 7/75 (9%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           +G  +++   ++     S   L+AWL EH  +PYPT G+K MLA  T +T  QVS WF N
Sbjct: 337 FGQPHNIWRPQRGLPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFIN 396

Query: 119 ARRRLKKENKMTWEP 133
           AR RL       W+P
Sbjct: 397 ARVRL-------WKP 404


>gi|147905075|ref|NP_001089851.1| uncharacterized protein LOC734917 [Xenopus laevis]
 gi|80476382|gb|AAI08543.1| MGC131001 protein [Xenopus laevis]
          Length = 428

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 39/56 (69%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +R    +++T  +++WL +H  +PYPT+ EK  +AI T +TL QV+ WF NARRR+
Sbjct: 253 KRGVLPKQATNVMRSWLFQHIGHPYPTEDEKKQIAIQTNLTLLQVNNWFINARRRI 308


>gi|319199495|ref|NP_001187376.1| homeobox protein akr [Ictalurus punctatus]
 gi|308322853|gb|ADO28564.1| homeobox protein akr [Ictalurus punctatus]
          Length = 240

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 37/59 (62%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL  E
Sbjct: 39  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSKQTHLSTLQVCNWFINARRRLLPE 97


>gi|326496765|dbj|BAJ98409.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 611

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 7/75 (9%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           +G  +++   ++     S   L+AWL EH  +PYPT G+K MLA  T +T  QVS WF N
Sbjct: 338 FGQPHNIWRPQRGLPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFIN 397

Query: 119 ARRRLKKENKMTWEP 133
           AR RL       W+P
Sbjct: 398 ARVRL-------WKP 405


>gi|426385370|ref|XP_004059191.1| PREDICTED: homeobox protein TGIF1 isoform 2 [Gorilla gorilla
           gorilla]
          Length = 401

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 160 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 219

Query: 121 RRL 123
           RRL
Sbjct: 220 RRL 222


>gi|354499685|ref|XP_003511938.1| PREDICTED: homeobox protein TGIF1-like isoform 2 [Cricetulus
           griseus]
 gi|344238085|gb|EGV94188.1| Homeobox protein TGIF1 [Cricetulus griseus]
          Length = 286

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 52  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 107


>gi|378731712|gb|EHY58171.1| hypothetical protein, variant [Exophiala dermatitidis NIH/UT8656]
          Length = 307

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  R+ T  L+AW +EH  +PYPT+ +K      T +T+ Q+S WF NARRR
Sbjct: 215 RRGNLPRQITDILRAWFHEHLDHPYPTEEDKQAFMARTGLTIAQISNWFINARRR 269


>gi|147766087|emb|CAN65695.1| hypothetical protein VITISV_001986 [Vitis vinifera]
          Length = 533

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           S A L++WL EH  +PYP   EK+MLA  T +T  QVS WF NAR RL K    +M  E 
Sbjct: 363 SVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKPMIEEMYKEE 422

Query: 134 KNKTDDDDDAIISDCDEKDKDD 155
             ++  + D +++    ++ ++
Sbjct: 423 FAESSVESDPLVASSSTREGEE 444


>gi|351715774|gb|EHB18693.1| Homeobox protein TGIF1 [Heterocephalus glaber]
          Length = 294

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 70  RRGNLPKESVQILRDWLFEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 125


>gi|56122228|gb|AAV74265.1| transforming growth factor-beta-induced factor [Saimiri
           boliviensis]
          Length = 236

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 2   RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 57


>gi|195333798|ref|XP_002033573.1| GM20355 [Drosophila sechellia]
 gi|194125543|gb|EDW47586.1| GM20355 [Drosophila sechellia]
          Length = 549

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           L  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF NARRR+ 
Sbjct: 91  LRKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRIL 150

Query: 125 KE 126
            E
Sbjct: 151 PE 152


>gi|444727215|gb|ELW67718.1| Homeobox protein TGIF1 [Tupaia chinensis]
          Length = 480

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 239 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 298

Query: 121 RRL 123
           RRL
Sbjct: 299 RRL 301


>gi|242010201|ref|XP_002425861.1| Homeobox protein TGIF2LX, putative [Pediculus humanus corporis]
 gi|212509813|gb|EEB13123.1| Homeobox protein TGIF2LX, putative [Pediculus humanus corporis]
          Length = 351

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 34/56 (60%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  + S   LK WL EH+ N YP   EK+ L+   K+T+ QV  WF NARRR+
Sbjct: 70  RRGNLPKHSVKILKRWLYEHRYNAYPNDAEKLTLSQEAKLTVLQVCNWFINARRRI 125


>gi|28178843|ref|NP_733796.2| homeobox protein TGIF1 isoform a [Homo sapiens]
 gi|215274200|sp|Q15583.3|TGIF1_HUMAN RecName: Full=Homeobox protein TGIF1; AltName:
           Full=5'-TG-3'-interacting factor 1
 gi|261858278|dbj|BAI45661.1| interleukin 10 [synthetic construct]
          Length = 401

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 160 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 219

Query: 121 RRL 123
           RRL
Sbjct: 220 RRL 222


>gi|13752409|gb|AAK38646.1|AF334759_1 homeodomain protein JUBEL2 [Hordeum vulgare subsp. vulgare]
 gi|260183696|gb|ACX35970.1| bell-like homeodomain protein [Hordeum vulgare subsp. vulgare]
 gi|291464055|gb|ADE05565.1| bell-like homeodomain protein [Hordeum vulgare]
 gi|291464057|gb|ADE05566.1| bell-like homeodomain protein [Hordeum vulgare]
 gi|326499894|dbj|BAJ90782.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 611

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 40/67 (59%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           +G  +++   ++     S   L+AWL EH  +PYPT G+K MLA  T +T  QVS WF N
Sbjct: 338 FGQPHNIWRPQRGLPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFIN 397

Query: 119 ARRRLKK 125
           AR RL K
Sbjct: 398 ARVRLWK 404


>gi|240273850|gb|EER37369.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
 gi|325094717|gb|EGC48027.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
          Length = 348

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 258 RRGNLPKSVTDVLRAWFHEHLDHPYPSEEDKQMFISRTGLTISQISNWFINARRR 312


>gi|225555403|gb|EEH03695.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 348

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 258 RRGNLPKSVTDVLRAWFHEHLDHPYPSEEDKQMFISRTGLTISQISNWFINARRR 312


>gi|28573852|ref|NP_788337.1| vismay, isoform B [Drosophila melanogaster]
 gi|28380865|gb|AAO41402.1| vismay, isoform B [Drosophila melanogaster]
          Length = 524

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           L  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF NARRR+ 
Sbjct: 91  LRKRRGNLPKSSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRIL 150

Query: 125 KE 126
            E
Sbjct: 151 PE 152


>gi|62896427|emb|CAD89693.1| BEL1-like homeodomain protein HB2 [Oryza sativa Japonica Group]
          Length = 579

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 3/89 (3%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           S + L+AWL EH  +PYP   EK+MLA  T +T +Q+S WF NAR RL K     M  E 
Sbjct: 392 SVSILRAWLFEHFLHPYPKDSEKLMLARQTGLTRSQISNWFINARVRLWKPMIEDMYKEE 451

Query: 134 KNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
             + D D ++  SD   + KD +   E+K
Sbjct: 452 IGEADLDSNS-SSDNVPRSKDKIATSEDK 479


>gi|290350474|dbj|BAI78207.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 610

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|118343958|ref|NP_001071803.1| transcription factor protein [Ciona intestinalis]
 gi|70570981|dbj|BAE06656.1| transcription factor protein [Ciona intestinalis]
          Length = 442

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 8/122 (6%)

Query: 9   KTLRPELQLFTQVPIQVN----ISSTKVPALQSRRQLCGIDKQVIQVSNLTAVRYGAGYD 64
           ++L P  Q+ +Q    ++    +S   V    S+ Q+ G  +Q+  + +      G   +
Sbjct: 190 QSLSPNSQMLSQSDSGIDGSTPLSQVGVSPPSSQLQMLGT-QQLFHLQHQPIPSCGLTDE 248

Query: 65  LAAR---RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 121
            + R   R    +++T  L++WL  H  +PYPT+ EK  LA  T +TL QV+ WF NARR
Sbjct: 249 TSGRKTKRGVLPKQATEILRSWLFSHIVHPYPTEDEKRSLATQTNLTLLQVNNWFINARR 308

Query: 122 RL 123
           R+
Sbjct: 309 RI 310


>gi|290350518|dbj|BAI78229.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 614

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 362 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 421

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 422 WFINARVRLWK 432


>gi|290350494|dbj|BAI78217.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|242033375|ref|XP_002464082.1| hypothetical protein SORBIDRAFT_01g011970 [Sorghum bicolor]
 gi|241917936|gb|EER91080.1| hypothetical protein SORBIDRAFT_01g011970 [Sorghum bicolor]
          Length = 354

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           S A L+AWL +H  +PYP  GEK+ LA+ T ++  Q+S WF NAR RL K
Sbjct: 276 SVAVLRAWLFDHFLHPYPDDGEKLRLAVTTGLSRRQISNWFINARVRLWK 325


>gi|255538762|ref|XP_002510446.1| bel1 homeotic protein, putative [Ricinus communis]
 gi|223551147|gb|EEF52633.1| bel1 homeotic protein, putative [Ricinus communis]
          Length = 739

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 8/93 (8%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL--------KKEN 127
           S + L+AWL EH  +PYP   EKIMLA  T ++  QV+ WF NAR RL         KE 
Sbjct: 439 SVSILRAWLFEHFLHPYPNDSEKIMLAKQTGLSRNQVANWFINARVRLWKPMVEEIYKEE 498

Query: 128 KMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDE 160
               E  +++  DDDA  +  + +   D  +DE
Sbjct: 499 FGDLEANSRSSQDDDATKALGENQLASDNRLDE 531


>gi|195442119|ref|XP_002068807.1| GK17831 [Drosophila willistoni]
 gi|194164892|gb|EDW79793.1| GK17831 [Drosophila willistoni]
          Length = 559

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 34/56 (60%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  ++S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF NARRR+
Sbjct: 99  RRGNLPKQSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRI 154


>gi|290350500|dbj|BAI78220.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|148706419|gb|EDL38366.1| TG interacting factor, isoform CRA_d [Mus musculus]
          Length = 136

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 18  RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 73


>gi|429961299|gb|ELA40844.1| hypothetical protein VICG_02118 [Vittaforma corneae ATCC 50505]
          Length = 209

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 38/56 (67%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +R N  ++ +  LK WL E+  NPYP++ EK ML  +T + +TQ++ WF NARRR+
Sbjct: 142 KRANYPKKISRILKNWLKENMNNPYPSESEKAMLMELTGLDVTQINNWFINARRRI 197


>gi|290350482|dbj|BAI78211.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350498|dbj|BAI78219.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350502|dbj|BAI78221.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350504|dbj|BAI78222.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350506|dbj|BAI78223.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|290350468|dbj|BAI78204.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350470|dbj|BAI78205.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350496|dbj|BAI78218.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|159492488|gb|ABW97430.1| putative transcription factor qSH-1 [Oryza nivara]
          Length = 612

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|159492486|gb|ABW97429.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|159492484|gb|ABW97428.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350520|dbj|BAI78230.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350522|dbj|BAI78231.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 614

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 362 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 421

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 422 WFINARVRLWK 432


>gi|125528380|gb|EAY76494.1| hypothetical protein OsI_04434 [Oryza sativa Indica Group]
 gi|159492448|gb|ABW97410.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492452|gb|ABW97412.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492460|gb|ABW97416.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492490|gb|ABW97431.1| putative transcription factor qSH-1 [Oryza nivara]
 gi|290350434|dbj|BAI78187.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350448|dbj|BAI78194.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350450|dbj|BAI78195.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350454|dbj|BAI78197.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350456|dbj|BAI78198.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350514|dbj|BAI78227.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|19352101|dbj|BAB85942.1| qSH-1 [Oryza sativa Indica Group]
 gi|19352105|dbj|BAB85944.1| qSH-1 [Oryza sativa Indica Group]
 gi|290350444|dbj|BAI78192.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
          Length = 612

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|115441049|ref|NP_001044804.1| Os01g0848400 [Oryza sativa Japonica Group]
 gi|15408891|dbj|BAB64282.1| qSH-1 [Oryza sativa Japonica Group]
 gi|19352103|dbj|BAB85943.1| qSH-1 [Oryza sativa Japonica Group]
 gi|19352107|dbj|BAB85945.1| qSH-1 [Oryza sativa Japonica Group]
 gi|113534335|dbj|BAF06718.1| Os01g0848400 [Oryza sativa Japonica Group]
 gi|125572633|gb|EAZ14148.1| hypothetical protein OsJ_04077 [Oryza sativa Japonica Group]
 gi|159492450|gb|ABW97411.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492454|gb|ABW97413.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492456|gb|ABW97414.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492458|gb|ABW97415.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492462|gb|ABW97417.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492464|gb|ABW97418.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492466|gb|ABW97419.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492468|gb|ABW97420.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492470|gb|ABW97421.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492472|gb|ABW97422.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492474|gb|ABW97423.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492476|gb|ABW97424.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492480|gb|ABW97426.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|159492495|gb|ABW97433.1| putative transcription factor qSH-1 [Oryza nivara]
 gi|159492497|gb|ABW97434.1| putative transcription factor qSH-1 [Oryza nivara x Oryza
           rufipogon]
 gi|290350396|dbj|BAI78168.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350398|dbj|BAI78169.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350400|dbj|BAI78170.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350402|dbj|BAI78171.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350404|dbj|BAI78172.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350406|dbj|BAI78173.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350408|dbj|BAI78174.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350410|dbj|BAI78175.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350412|dbj|BAI78176.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350414|dbj|BAI78177.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350416|dbj|BAI78178.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350418|dbj|BAI78179.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350420|dbj|BAI78180.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350422|dbj|BAI78181.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350424|dbj|BAI78182.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350426|dbj|BAI78183.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350428|dbj|BAI78184.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350430|dbj|BAI78185.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350432|dbj|BAI78186.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350436|dbj|BAI78188.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350438|dbj|BAI78189.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350440|dbj|BAI78190.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350442|dbj|BAI78191.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350446|dbj|BAI78193.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350452|dbj|BAI78196.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350458|dbj|BAI78199.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350460|dbj|BAI78200.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350462|dbj|BAI78201.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350464|dbj|BAI78202.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350466|dbj|BAI78203.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350476|dbj|BAI78208.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350478|dbj|BAI78209.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350480|dbj|BAI78210.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350486|dbj|BAI78213.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350488|dbj|BAI78214.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350492|dbj|BAI78216.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350510|dbj|BAI78225.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350512|dbj|BAI78226.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350516|dbj|BAI78228.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350524|dbj|BAI78232.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350526|dbj|BAI78233.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|195026890|ref|XP_001986359.1| GH20569 [Drosophila grimshawi]
 gi|193902359|gb|EDW01226.1| GH20569 [Drosophila grimshawi]
          Length = 583

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 34/59 (57%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           L  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF NARRR+
Sbjct: 103 LRKRRGNLPKHSVKILKRWLYEHRYNAYPSDAEKFSLSQEANLTVLQVCNWFINARRRI 161


>gi|293330419|dbj|BAJ04690.1| BEL1-type homeodomain protein [Triticum aestivum]
          Length = 623

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 40/67 (59%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           +G  +++   ++     S   L+AWL EH  +PYPT G+K MLA  T +T  QVS WF N
Sbjct: 353 FGQPHNIWRPQRGLPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFIN 412

Query: 119 ARRRLKK 125
           AR RL K
Sbjct: 413 ARVRLWK 419


>gi|19074324|ref|NP_585830.1| MEI2-RELATED PROTEIN [Encephalitozoon cuniculi GB-M1]
 gi|51701601|sp|Q8SRR1.1|HD12_ENCCU RecName: Full=Homeobox protein HD-12; AltName: Full=EcHD-12
 gi|19068966|emb|CAD25434.1| MEI2-RELATED PROTEIN [Encephalitozoon cuniculi GB-M1]
 gi|30793766|tpg|DAA01310.1| TPA_exp: TALE homeodomain protein EcHD-12 [Encephalitozoon
           cuniculi]
          Length = 193

 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
             RR N  +E +  L+ WL +H   PYP+K EK ML+  T + L+Q+  WFANARRR+
Sbjct: 124 VIRRINFPKEISKILRKWLKKHLTYPYPSKIEKKMLSKETGLKLSQIDNWFANARRRI 181


>gi|290350484|dbj|BAI78212.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 59.7 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|159492493|gb|ABW97432.1| putative transcription factor qSH-1 [Oryza nivara]
 gi|290350472|dbj|BAI78206.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350490|dbj|BAI78215.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 59.7 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|224082920|ref|XP_002306891.1| predicted protein [Populus trichocarpa]
 gi|222856340|gb|EEE93887.1| predicted protein [Populus trichocarpa]
          Length = 383

 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 34/50 (68%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           S A L++WL EH  +PYP + EK+MLA  T +T  QVS WF NAR RL K
Sbjct: 296 SVAILRSWLFEHFLHPYPNESEKLMLASQTGLTKNQVSNWFINARVRLWK 345


>gi|12656811|gb|AAK00972.1|AC079736_12 putative homeodomain protein [Oryza sativa Japonica Group]
 gi|108710417|gb|ABF98212.1| Associated with HOX family protein, expressed [Oryza sativa
           Japonica Group]
 gi|215697724|dbj|BAG91718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|284431780|gb|ADB84631.1| homeodomain protein [Oryza sativa Japonica Group]
          Length = 642

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRE-STATLKAWLNEHKKNPYPTKGEKIMLA 102
           ID+Q+ Q       +YG     A R +    E S + L+AWL EH  +PYP   EK+MLA
Sbjct: 361 IDQQLRQQRAFQ--QYGLLQQNAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKLMLA 418

Query: 103 IITKMTLTQVSTWFANARRRLKKE--NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDE 160
             T +T +Q+S WF NAR RL K     M  E   + D D ++  SD   + KD +   E
Sbjct: 419 RQTGLTRSQISNWFINARVRLWKPMIEDMYKEEIGEADLDSNS-SSDNVPRSKDKIATSE 477

Query: 161 EKMKQHHRMVKGHFP 175
           +K      M + + P
Sbjct: 478 DKEDLKSSMSQTYQP 492


>gi|42528295|gb|AAS18416.1| benzothiadiazole-induced homeodomain protein 1 [Oryza sativa Indica
           Group]
          Length = 642

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRE-STATLKAWLNEHKKNPYPTKGEKIMLA 102
           ID+Q+ Q       +YG     A R +    E S + L+AWL EH  +PYP   EK+MLA
Sbjct: 361 IDQQLRQQRAFQ--QYGLLQQNAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKLMLA 418

Query: 103 IITKMTLTQVSTWFANARRRLKKE--NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDE 160
             T +T +Q+S WF NAR RL K     M  E   + D D ++  SD   + KD +   E
Sbjct: 419 RQTGLTRSQISNWFINARVRLWKPMIEDMYKEEIGEADLDSNS-SSDNVPRSKDKIATSE 477

Query: 161 EKMKQHHRMVKGHFP 175
           +K      M + + P
Sbjct: 478 DKEDLKSSMSQTYQP 492


>gi|159492482|gb|ABW97427.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 608

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 356 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 415

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 416 WFINARVRLWK 426


>gi|159492478|gb|ABW97425.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 614

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 362 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 421

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 422 WFINARVRLWK 432


>gi|125804420|ref|XP_707868.2| PREDICTED: homeobox protein PKNOX1 isoform 3 [Danio rerio]
          Length = 445

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 39/57 (68%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           A+R    + +T  +++WL +H  +PYPT+ EK  +A+ T +TL QV+ WF NARRR+
Sbjct: 277 AKRGILPKHATNVMRSWLFQHIGHPYPTEDEKKQIALQTNLTLLQVNNWFINARRRI 333


>gi|148228040|ref|NP_001087646.1| MGC81734 protein [Xenopus laevis]
 gi|51703657|gb|AAH81037.1| MGC81734 protein [Xenopus laevis]
          Length = 269

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 38/59 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  ++S   L+ WL EH+ N YP++ EK+ L+  T +T+ Q+  WF NARRR+  E
Sbjct: 40  RRGNLPKQSVKILRDWLFEHRFNAYPSEQEKLCLSGQTNLTVLQICNWFINARRRVLPE 98


>gi|24653080|ref|NP_725182.1| achintya, isoform A [Drosophila melanogaster]
 gi|21627409|gb|AAF58497.2| achintya, isoform A [Drosophila melanogaster]
 gi|28316988|gb|AAO39514.1| RE30881p [Drosophila melanogaster]
 gi|220942486|gb|ACL83786.1| achi-PA [synthetic construct]
 gi|220952690|gb|ACL88888.1| achi-PA [synthetic construct]
          Length = 426

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           L  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF NARRR+ 
Sbjct: 93  LRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRIL 152

Query: 125 KE 126
            E
Sbjct: 153 PE 154


>gi|388497438|gb|AFK36785.1| unknown [Lotus japonicus]
          Length = 274

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           S + L+AWL EH  NPYP   EKIMLA  T ++  QV+ WF NAR RL K
Sbjct: 15  SVSILRAWLFEHFLNPYPKDSEKIMLARQTGLSRNQVANWFINARVRLWK 64


>gi|290350508|dbj|BAI78224.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           +A  +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS 
Sbjct: 360 SASAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSN 419

Query: 115 WFANARRRLKK 125
           WF NAR RL K
Sbjct: 420 WFINARVRLWK 430


>gi|219944347|gb|ACL54971.1| ACHI protein [Bombyx mori]
 gi|219944349|gb|ACL54972.1| ACHI protein [Bombyx mori]
          Length = 321

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 26  NISSTKVPALQSRRQ--LCGIDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAW 83
           N S T   A +SRRQ  L G+     Q   +T         +  RR N  + S   LK W
Sbjct: 63  NESGTDGEADRSRRQTILHGVSGMQPQGQIVT---------IRKRRGNLAKHSVKILKRW 113

Query: 84  LNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           L +H+ N YP+  EKI L+    +++ QV  WF NARRR+  E
Sbjct: 114 LYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILPE 156


>gi|194883616|ref|XP_001975897.1| GG22573 [Drosophila erecta]
 gi|190659084|gb|EDV56297.1| GG22573 [Drosophila erecta]
          Length = 562

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           L  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF NARRR+ 
Sbjct: 105 LRKRRGNLPKHSVKILKRWLYEHRYNAYPSDAEKYTLSQEANLTVLQVCNWFINARRRIL 164

Query: 125 KE 126
            E
Sbjct: 165 PE 166


>gi|255948810|ref|XP_002565172.1| Pc22g12270 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592189|emb|CAP98515.1| Pc22g12270 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 307

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYP++ +K M    T ++++Q+S WF NARRR
Sbjct: 216 RRGNLPKPVTDILRAWFHEHLDHPYPSEEDKQMFMTRTGLSISQISNWFINARRR 270


>gi|391343811|ref|XP_003746199.1| PREDICTED: homeobox protein TGIF2-like [Metaseiulus occidentalis]
          Length = 249

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP+  EKI L+  T +++ QV  WF NARRR+
Sbjct: 40  RRGNLPKESVKLLRLWLYEHRYNAYPSDQEKIYLSKETGLSVLQVCNWFINARRRI 95


>gi|405951640|gb|EKC19536.1| Homeobox protein TGIF2LX [Crassostrea gigas]
          Length = 1087

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 33/50 (66%)

Query: 74   RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
            +E+ A +  WL +HK NPYP   EK ML   T +T+ Q++ WF NARRR+
Sbjct: 1029 KEAVAIMLEWLRQHKDNPYPNDDEKAMLIKQTGLTINQINYWFTNARRRI 1078


>gi|24653082|ref|NP_725183.1| achintya, isoform C [Drosophila melanogaster]
 gi|21627411|gb|AAM68695.1| achintya, isoform C [Drosophila melanogaster]
          Length = 555

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           L  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF NARRR+ 
Sbjct: 93  LRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRIL 152

Query: 125 KE 126
            E
Sbjct: 153 PE 154


>gi|326516982|dbj|BAJ96483.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 636

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 6/133 (4%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRE-STATLKAWLNEHKKNPYPTKGEKIMLA 102
           ID+Q+ Q       +YG     A R +    E S + L+AWL EH  +PYP   EK+MLA
Sbjct: 358 IDQQLRQQRAFQ--QYGMLQQNAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKLMLA 415

Query: 103 IITKMTLTQVSTWFANARRRLKKE--NKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDE 160
             T +T +Q+S WF NAR RL K     M  E   + + D ++  SD   + KD +   E
Sbjct: 416 RQTGLTRSQISNWFINARVRLWKPMIEDMYKEETGEAELDSNS-SSDNVPRSKDKMASCE 474

Query: 161 EKMKQHHRMVKGH 173
           ++  Q   M +G 
Sbjct: 475 DREDQKCSMSQGQ 487


>gi|225458165|ref|XP_002281033.1| PREDICTED: BEL1-like homeodomain protein 11 [Vitis vinifera]
 gi|302142555|emb|CBI19758.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           S A L++WL EH  +PYP   EK+MLA  T +T  QVS WF NAR RL K
Sbjct: 380 SVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWK 429


>gi|237648964|ref|NP_001153660.1| achintya [Bombyx mori]
 gi|224038241|gb|ACN38265.1| ACHI protein [Bombyx mori]
          Length = 360

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 26  NISSTKVPALQSRRQ--LCGIDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAW 83
           N S T   A +SRRQ  L G+     Q   +T         +  RR N  + S   LK W
Sbjct: 63  NESGTDGEADRSRRQTILHGVSGMQPQGQIVT---------IRKRRGNLAKHSVKILKRW 113

Query: 84  LNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           L +H+ N YP+  EKI L+    +++ QV  WF NARRR+  E
Sbjct: 114 LYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILPE 156


>gi|322780407|gb|EFZ09895.1| hypothetical protein SINV_02505 [Solenopsis invicta]
          Length = 305

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 34/52 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 119
           RR N  +ES  TLK WL+EH+ N YP + EK+ L+  T +T+ QV  WF NA
Sbjct: 39  RRGNLPKESVETLKRWLSEHRFNAYPDEAEKLALSTQTNLTVMQVCNWFINA 90


>gi|357619185|gb|EHJ71862.1| achintya [Danaus plexippus]
          Length = 339

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 37/66 (56%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
            G  +  RR N  + S   LK WL EH+ N YP+  EK+ L+    +T+ QV  WF NAR
Sbjct: 87  GGIIVRKRRGNLPKHSVKILKRWLYEHRYNAYPSDAEKLTLSQEANLTVLQVCNWFINAR 146

Query: 121 RRLKKE 126
           RR+  E
Sbjct: 147 RRILPE 152


>gi|148222890|ref|NP_001087637.1| TGFB-induced factor homeobox 2 [Xenopus laevis]
 gi|51703464|gb|AAH81024.1| MGC81646 protein [Xenopus laevis]
          Length = 256

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 38/59 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  +E+   L+ WL EH+ N YP++ EK+ L+  T +T+ Q+  WF NARRR+  E
Sbjct: 27  RRGNLPKEAVKILRDWLYEHRFNAYPSEQEKLSLSGQTNLTVLQICNWFINARRRILPE 85


>gi|345569021|gb|EGX51890.1| hypothetical protein AOL_s00043g624 [Arthrobotrys oligospora ATCC
           24927]
          Length = 388

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANA-RRRLKKE 126
           RR N  ++ T  L+ WL+ H  +PYPT+ +K+ L   T +T+ Q+S WF NA RRRL   
Sbjct: 296 RRGNLPKQVTDLLRNWLHAHLHHPYPTEDQKLELVNQTGLTMNQISNWFINARRRRLPAY 355

Query: 127 NKMTWEPKNKTDDDDDA 143
           N     P N    D DA
Sbjct: 356 NP----PNNSARSDMDA 368


>gi|157105675|ref|XP_001648974.1| homeobox protein pknox1 [Aedes aegypti]
 gi|108868968|gb|EAT33193.1| AAEL014550-PA, partial [Aedes aegypti]
          Length = 355

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 38/56 (67%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +R    + +T+ ++AWL +H  +PYPT+ EK  +A  T +TL QV+ WF NARRR+
Sbjct: 294 KRSILPKHATSVMRAWLFQHLVHPYPTEDEKRAIAAQTNLTLLQVNNWFINARRRI 349


>gi|356518014|ref|XP_003527679.1| PREDICTED: BEL1-like homeodomain protein 11-like [Glycine max]
          Length = 447

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S A L++WL EH  +PYP   EK+MLA  T +T  QVS WF NAR RL       W+P
Sbjct: 361 SVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRL-------WKP 411


>gi|356509666|ref|XP_003523567.1| PREDICTED: BEL1-like homeodomain protein 11-like [Glycine max]
          Length = 440

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           S A L++WL EH  +PYP   EK+MLA  T +T  QVS WF NAR RL K
Sbjct: 354 SVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWK 403


>gi|402223066|gb|EJU03131.1| hypothetical protein DACRYDRAFT_15039 [Dacryopinax sp. DJM-731 SS1]
          Length = 593

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 3/81 (3%)

Query: 48  VIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKM 107
           V+ + +L+    GA    A RR    RE T  LK WL +H ++PYPT+ EK  +   T +
Sbjct: 328 VLSIDSLSTDDSGAK---AKRRGKLPREVTEYLKEWLMKHAEHPYPTEEEKKEMCRNTGL 384

Query: 108 TLTQVSTWFANARRRLKKENK 128
            +TQ+S WF NARRR+   N+
Sbjct: 385 HMTQLSNWFINARRRILAPNR 405


>gi|242059233|ref|XP_002458762.1| hypothetical protein SORBIDRAFT_03g039840 [Sorghum bicolor]
 gi|241930737|gb|EES03882.1| hypothetical protein SORBIDRAFT_03g039840 [Sorghum bicolor]
          Length = 593

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 41/67 (61%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           +G  +++   ++     + + L+AWL EH  +PYPT G+K MLA  T +T  QVS WF N
Sbjct: 342 FGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFIN 401

Query: 119 ARRRLKK 125
           AR RL K
Sbjct: 402 ARVRLWK 408


>gi|67523127|ref|XP_659624.1| hypothetical protein AN2020.2 [Aspergillus nidulans FGSC A4]
 gi|40745696|gb|EAA64852.1| hypothetical protein AN2020.2 [Aspergillus nidulans FGSC A4]
          Length = 280

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  LKAW + H  +PYP++ +K ML   T +T+ Q+S WF NARRR
Sbjct: 188 RRGNLPKPVTEILKAWFHAHLDHPYPSEEDKQMLMSRTGLTINQISNWFINARRR 242


>gi|213511136|ref|NP_001133948.1| Homeobox protein PKNOX1 [Salmo salar]
 gi|209155930|gb|ACI34197.1| Homeobox protein PKNOX1 [Salmo salar]
          Length = 446

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 37/56 (66%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +R    + +T  ++ WL +H  +PYPT+ EK  LAI T +TL QV+ WF NARRR+
Sbjct: 283 KRGVLPKSATNIMRTWLFQHIGHPYPTEDEKKQLAIQTNLTLLQVNNWFINARRRI 338


>gi|321478012|gb|EFX88970.1| hypothetical protein DAPPUDRAFT_310984 [Daphnia pulex]
          Length = 392

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 36/59 (61%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  +ES   LK WL +H+ N YP+  EK +LA    +T+ QV  WF NARRR+  E
Sbjct: 43  RRGNLPKESVRLLKKWLYDHRYNAYPSDNEKAILAKEAGLTVLQVCNWFINARRRVLPE 101


>gi|47225129|emb|CAF98756.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 403

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 32/95 (33%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLT------------------ 110
           ++ A ++    LK WL +H+ NPYPTK EKI+LA+ ++MTL                   
Sbjct: 70  KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQTSDDVSAKLPVRVKKLE 129

Query: 111 -----------QVSTWFANARRRLK---KENKMTW 131
                      QVS WFANARRRLK   ++  ++W
Sbjct: 130 LCVFPLKPTCQQVSNWFANARRRLKNTVRQPDLSW 164


>gi|323508027|emb|CBQ67898.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
          Length = 715

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/56 (51%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR    +  T  LK WL EH  +PYPT+ EK  L  +T +TL+QVS WF NARRR+
Sbjct: 629 RRGKLPKPVTDLLKTWLLEHASHPYPTEDEKRSLCSMTGLTLSQVSNWFINARRRI 684


>gi|350411115|ref|XP_003489246.1| PREDICTED: homeobox protein AKR-like isoform 2 [Bombus impatiens]
          Length = 449

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 38/70 (54%)

Query: 57  VRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           V +   + +  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF
Sbjct: 170 VHHSGNHSVRKRRGNLPKTSVKILKRWLYEHRYNAYPSDNEKQELSQEAHLTVLQVCNWF 229

Query: 117 ANARRRLKKE 126
            NARRR+  E
Sbjct: 230 INARRRILPE 239


>gi|134055907|emb|CAK37385.1| unnamed protein product [Aspergillus niger]
 gi|350638749|gb|EHA27105.1| hypothetical protein ASPNIDRAFT_195925 [Aspergillus niger ATCC
           1015]
          Length = 849

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 54  LTAVRYGAGYDLAARRKNA--TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQ 111
           L ++ + A  D  AR+ N+   RE+   LKAWL EH ++PYPT+ EK  L   T +   Q
Sbjct: 141 LKSLSFIAEDDGRARKSNSRLAREAVRILKAWLQEHWEHPYPTEQEKDELQQRTGLKRMQ 200

Query: 112 VSTWFANARRRLK 124
           +S W ANARRR K
Sbjct: 201 ISNWLANARRRGK 213


>gi|388852058|emb|CCF54234.1| uncharacterized protein [Ustilago hordei]
          Length = 733

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/56 (51%), Positives = 37/56 (66%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR    +  T  LK+WL EH  +PYPT+ EK  L  +T +TL+QVS WF NARRR+
Sbjct: 644 RRGKLPKPVTDLLKSWLLEHASHPYPTEDEKRSLCSMTGLTLSQVSNWFINARRRI 699


>gi|320170617|gb|EFW47516.1| pre-B-cell leukemia transcription factor 3D [Capsaspora owczarzaki
           ATCC 30864]
          Length = 212

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 28  SSTKVPALQSRRQLCG-IDKQVIQVSN-LTAVRY--------------GAGYDLAARRKN 71
           ++++ P+L   R L   +D Q+++V++ L+++ Y                  D   RR N
Sbjct: 98  AASETPSLAEIRGLFAFLDMQLLKVAHRLSSLEYQLKRKVYTKVIFLKSTFLDSRKRRIN 157

Query: 72  ATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
            +RE+   L  W   H ++PYP++ EK  LA  T +T+ Q+STWFAN R R
Sbjct: 158 LSREAQQVLNDWFLAHIEHPYPSESEKEQLADQTNLTMRQISTWFANKRNR 208


>gi|46852187|gb|AAT02761.1| AhpA [Emericella nidulans]
 gi|259487387|tpe|CBF86025.1| TPA: AhpA [Source:UniProtKB/TrEMBL;Acc:Q5J1U2] [Aspergillus
           nidulans FGSC A4]
          Length = 293

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  LKAW + H  +PYP++ +K ML   T +T+ Q+S WF NARRR
Sbjct: 201 RRGNLPKPVTEILKAWFHAHLDHPYPSEEDKQMLMSRTGLTINQISNWFINARRR 255


>gi|268579833|ref|XP_002644899.1| C. briggsae CBR-CEH-60 protein [Caenorhabditis briggsae]
          Length = 378

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 39/59 (66%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           +R+N  + +T TL+ W +EH++NPYPT  EK  LA    + ++QV+ WF N R R K++
Sbjct: 183 KRRNFDKNTTDTLQNWFHEHRQNPYPTDQEKAELAKQCNIKISQVNNWFGNQRIRSKQQ 241


>gi|452002758|gb|EMD95216.1| hypothetical protein COCHEDRAFT_10473 [Cochliobolus heterostrophus
           C5]
          Length = 306

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 41/65 (63%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           RR N  +E+T  LK W   ++++PYPT+ +K+ L   T ++L QVS WF NARRR  ++ 
Sbjct: 236 RRGNLPKEATNLLKDWFAANRQSPYPTEDQKMELCNRTGLSLNQVSNWFINARRRAPQKE 295

Query: 128 KMTWE 132
           +   E
Sbjct: 296 QRERE 300


>gi|224080389|ref|XP_002306123.1| predicted protein [Populus trichocarpa]
 gi|222849087|gb|EEE86634.1| predicted protein [Populus trichocarpa]
          Length = 413

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL       W+P
Sbjct: 199 SVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRL-------WKP 249


>gi|357119217|ref|XP_003561342.1| PREDICTED: BEL1-like homeodomain protein 7-like [Brachypodium
           distachyon]
          Length = 635

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S + L+AWL EH  +PYP   EK+MLA  T +T +Q+S WF NAR RL       W+P
Sbjct: 393 SVSILRAWLFEHFLDPYPKDSEKLMLARQTGLTRSQISNWFINARVRL-------WKP 443


>gi|56694844|gb|AAW23084.1| Prep, partial [Oikopleura dioica]
          Length = 214

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 44/74 (59%)

Query: 50  QVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTL 109
           Q  N++ +      D   +R    R++T TL+ WL +H  +PYP++ EK  LA  T +TL
Sbjct: 139 QNHNMSGLYDNFDADNRLKRGLLPRQATDTLRGWLFQHLVHPYPSEDEKRNLAQQTGLTL 198

Query: 110 TQVSTWFANARRRL 123
            QV+ WF NARRR+
Sbjct: 199 LQVNNWFINARRRI 212


>gi|296810010|ref|XP_002845343.1| AhpA [Arthroderma otae CBS 113480]
 gi|238842731|gb|EEQ32393.1| AhpA [Arthroderma otae CBS 113480]
          Length = 350

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 11/102 (10%)

Query: 31  KVPALQSRRQLCGIDKQVIQVSNLTAVRYGAGYDLAA----------RRKNATRESTATL 80
           ++P   S  Q    D+   Q S+    R  +G+ L+           RR N  +  T  L
Sbjct: 201 QLPYPASYEQPHACDRGYPQ-SSFGHFRPASGFCLSECELGDMREKKRRGNLPKPVTDML 259

Query: 81  KAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           +AWL EH  +PYPT+ +K +    T +T++Q+S WF NARRR
Sbjct: 260 RAWLWEHLDHPYPTEEDKQIFMSRTGLTISQISNWFINARRR 301


>gi|365987894|ref|XP_003670778.1| hypothetical protein NDAI_0F02170 [Naumovozyma dairenensis CBS 421]
 gi|343769549|emb|CCD25535.1| hypothetical protein NDAI_0F02170 [Naumovozyma dairenensis CBS 421]
          Length = 383

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 7/72 (9%)

Query: 51  VSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLT 110
           V  LT++++G       RR N  +E+   L +WL  H +NPYPT  EK  L I T +T  
Sbjct: 256 VEELTSLQHG-------RRSNLPKETIRILNSWLLNHLQNPYPTSQEKRDLLIKTGLTKV 308

Query: 111 QVSTWFANARRR 122
           Q+S WF N RRR
Sbjct: 309 QLSNWFINVRRR 320


>gi|317025774|ref|XP_001389780.2| homeobox and C2H2 transcription factor [Aspergillus niger CBS
           513.88]
          Length = 614

 Score = 58.9 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 54  LTAVRYGAGYDLAARRKNA--TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQ 111
           L ++ + A  D  AR+ N+   RE+   LKAWL EH ++PYPT+ EK  L   T +   Q
Sbjct: 141 LKSLSFIAEDDGRARKSNSRLAREAVRILKAWLQEHWEHPYPTEQEKDELQQRTGLKRMQ 200

Query: 112 VSTWFANARRRLK 124
           +S W ANARRR K
Sbjct: 201 ISNWLANARRRGK 213


>gi|242019283|ref|XP_002430091.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212515172|gb|EEB17353.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 283

 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 4/56 (7%)

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE----NKMTW 131
           LK+WL   ++NPYP + EKI LA  T +T  Q+  WFAN RR+LK      NK TW
Sbjct: 50  LKSWLVRRRENPYPNREEKIELAAQTGLTYIQICNWFANWRRKLKNSGKNINKFTW 105


>gi|224132532|ref|XP_002328315.1| predicted protein [Populus trichocarpa]
 gi|222837830|gb|EEE76195.1| predicted protein [Populus trichocarpa]
          Length = 307

 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S A L+AWL EH  +PYPT  +K MLA  T ++  QVS WF NAR RL       W+P
Sbjct: 108 SVAVLRAWLFEHFLHPYPTDADKHMLATQTGLSRNQVSNWFINARVRL-------WKP 158


>gi|426248342|ref|XP_004017922.1| PREDICTED: homeobox protein TGIF1-like [Ovis aries]
          Length = 272

 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 38/63 (60%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
           AG     RR N  +ES   L+ WL EH+ N YP++ EK +L+  T ++  QV  WF NA+
Sbjct: 31  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSKQTHLSTLQVCNWFINAQ 90

Query: 121 RRL 123
           RRL
Sbjct: 91  RRL 93


>gi|332376479|gb|AEE63379.1| unknown [Dendroctonus ponderosae]
          Length = 303

 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 53  NLTAVRYGAGYDLAA---RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTL 109
           N++    G G  L     RR N  + +   LK WL EH+ N YP+  EK+ L+    +T+
Sbjct: 58  NISNPNMGMGMGLTPVRKRRGNLPKHAVKILKRWLYEHRYNAYPSDAEKLTLSQEAGLTV 117

Query: 110 TQVSTWFANARRRLKKE 126
            QV  WF NARRR+  E
Sbjct: 118 LQVCNWFINARRRILPE 134


>gi|242033373|ref|XP_002464081.1| hypothetical protein SORBIDRAFT_01g011960 [Sorghum bicolor]
 gi|241917935|gb|EER91079.1| hypothetical protein SORBIDRAFT_01g011960 [Sorghum bicolor]
          Length = 649

 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           S + L+AWL EH  +PYP   EKIML+  T +T +Q+S WF NAR RL K     M  E 
Sbjct: 392 SVSILRAWLFEHFLHPYPKDSEKIMLSRQTGLTRSQISNWFINARVRLWKPMIEDMYKEE 451

Query: 134 KNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
             + + D ++  SD  ++++D     EEK
Sbjct: 452 IGEAELDSNS-SSDNGQRNRDKAPSSEEK 479


>gi|41054649|ref|NP_955861.1| TGFB-induced factor homeobox 1 [Danio rerio]
 gi|27882543|gb|AAH44510.1| TGFB-induced factor homeobox 1 [Danio rerio]
 gi|37362302|gb|AAQ91279.1| TGFB-induced factor [Danio rerio]
          Length = 273

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 37/59 (62%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  +ES   L+ WL +H+ N YP++ EK +L+  T ++  QV  WF NARRRL  E
Sbjct: 39  RRGNLPKESVQILRDWLYQHRYNAYPSEQEKALLSKQTHLSTLQVCNWFINARRRLLPE 97


>gi|449297832|gb|EMC93849.1| hypothetical protein BAUCODRAFT_212345 [Baudoinia compniacensis
           UAMH 10762]
          Length = 438

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 42/72 (58%)

Query: 54  LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
            T  +Y   +  A +R N  + ST  +K W +++  NPYP++ +K   + IT +++TQVS
Sbjct: 352 FTPSQYEYQHGKARKRSNLPKSSTEIMKTWFDQNIANPYPSEEQKAHFSRITGISMTQVS 411

Query: 114 TWFANARRRLKK 125
            WF N RRR  +
Sbjct: 412 NWFINHRRRCPE 423


>gi|307170304|gb|EFN62659.1| Homeobox protein AKR [Camponotus floridanus]
          Length = 337

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +E+   LK WL EH+ N YP++ EK  L+  T +++ QV  WF NARRR+
Sbjct: 52  RRGNLPKEAVNILKRWLVEHRYNAYPSESEKTNLSEQTSLSVLQVCNWFINARRRI 107


>gi|453085344|gb|EMF13387.1| hypothetical protein SEPMUDRAFT_148705 [Mycosphaerella populorum
           SO2202]
          Length = 429

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 7/92 (7%)

Query: 40  QLC--GIDKQVIQVSNLTAVRYGAGYDL----AARRKNATRESTATLKAWLNEHKKNPYP 93
           Q C  G   Q  Q SN+ A    + Y+     A +R N  ++ST  +K W +++  NPYP
Sbjct: 322 QDCQPGFPAQPYQ-SNVPAYFMPSHYEYQHGKARKRSNLPKQSTEIMKTWFDQNIANPYP 380

Query: 94  TKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           ++ +K + +  T +++TQVS WF N RRR  +
Sbjct: 381 SEEQKAVFSNATGISMTQVSNWFINHRRRCPE 412


>gi|383854308|ref|XP_003702663.1| PREDICTED: homeobox protein TGIF1-like [Megachile rotundata]
          Length = 325

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 39/70 (55%)

Query: 57  VRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           + +   + +  RR N  + S   LK WL EH+ N YP+  EK+ L+    +T+ QV  WF
Sbjct: 41  LHHSGTHSVRKRRGNLPKHSVKILKRWLYEHRYNAYPSDSEKLTLSQEANLTVLQVCNWF 100

Query: 117 ANARRRLKKE 126
            NARRR+  E
Sbjct: 101 INARRRILPE 110


>gi|41327237|gb|AAS00120.1| X-linked TGIF-like protein [Callithrix jacchus]
 gi|41327239|gb|AAS00121.1| X-linked TGIF-like protein [Saguinus oedipus]
          Length = 239

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 8/87 (9%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 128
           + N   ES   L+ W+ +H+   YP++ EK+ML+ IT ++ +QVS WF NARRR+     
Sbjct: 54  KGNLPVESVKILRDWMYKHRFRAYPSEAEKLMLSEITNLSFSQVSNWFINARRRIL---- 109

Query: 129 MTWEPKNKTDDDDDAIISDCDEKDKDD 155
               PK      +D+ +     KD D+
Sbjct: 110 ----PKMLGQSGNDSFVDQQTGKDNDN 132


>gi|358382686|gb|EHK20357.1| hypothetical protein TRIVIDRAFT_154909 [Trichoderma virens Gv29-8]
          Length = 1153

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 37/61 (60%)

Query: 73  TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWE 132
           +RES   LK WL+ H ++PYP+  EK ML   T +  TQ++ W ANARRR K +   +  
Sbjct: 173 SRESVRILKTWLSTHNRHPYPSDEEKEMLQRQTGLNKTQITNWLANARRRGKAQPPRSTS 232

Query: 133 P 133
           P
Sbjct: 233 P 233


>gi|326527287|dbj|BAK04585.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 342

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 13/82 (15%)

Query: 75  ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP- 133
           ES A L+AWL  H  +PYP+  EK+ LA+ T ++  Q+S WF NAR RL       W+P 
Sbjct: 261 ESVAVLRAWLFNHFLDPYPSDNEKLRLAVSTGLSRRQISNWFINARVRL-------WKPM 313

Query: 134 -----KNKTDDDDDAIISDCDE 150
                 ++  +D  A+ S  D+
Sbjct: 314 IEEMYADEFSEDSSAVSSRDDD 335


>gi|115489752|ref|NP_001067363.1| Os12g0636200 [Oryza sativa Japonica Group]
 gi|77557175|gb|ABA99971.1| Associated with HOX family protein, expressed [Oryza sativa
           Japonica Group]
 gi|113649870|dbj|BAF30382.1| Os12g0636200 [Oryza sativa Japonica Group]
 gi|125580192|gb|EAZ21338.1| hypothetical protein OsJ_36996 [Oryza sativa Japonica Group]
 gi|215697777|dbj|BAG91970.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 647

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 18/128 (14%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTAT-LKAWLNEHKKNPYPTKGEKIMLA 102
           ID+Q+ Q       +YG     A R +    E++ T L+AWL EH  +PYP   EK+MLA
Sbjct: 367 IDQQLRQQRAFQ--QYGMIPQNAWRPQRGLPENSVTILRAWLFEHFLHPYPKDSEKLMLA 424

Query: 103 IITKMTLTQVSTWFANARRRLKKENKMTWEP------KNKTDD--DDDAIISDCDEKDKD 154
             T +T +Q+S WF NAR RL       W+P      K +  D   D    SD   + KD
Sbjct: 425 RQTGLTRSQISNWFINARVRL-------WKPMIEDMYKEEIGDLEQDSNSSSDNAPRSKD 477

Query: 155 DLMMDEEK 162
            +   E+K
Sbjct: 478 KMASSEDK 485


>gi|340519217|gb|EGR49456.1| predicted protein [Trichoderma reesei QM6a]
          Length = 535

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 2/60 (3%)

Query: 65  LAARRKNATR--ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           +A+ ++N+TR  + T  L+ W   H+++PYP++ EK ML+  + +T TQV  WFANARRR
Sbjct: 164 IASYKRNSTRSVKKTRVLRNWFATHQEHPYPSEDEKCMLSEQSGLTKTQVINWFANARRR 223


>gi|161353496|ref|NP_571966.2| pbx/knotted 1 homeobox 1.1 [Danio rerio]
          Length = 433

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 59  YGAGYDLAARRKNAT--RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           +  G D + + K     +++T  +++WL +H  +PYPT+ EK  +A  T +TL QV+ WF
Sbjct: 258 FFGGDDSSPKNKRGVLPKQATNVMRSWLFQHIAHPYPTEEEKKQIATQTNLTLLQVNNWF 317

Query: 117 ANARRRL 123
            NARRR+
Sbjct: 318 INARRRI 324


>gi|356544766|ref|XP_003540818.1| PREDICTED: BEL1-like homeodomain protein 1-like [Glycine max]
          Length = 741

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE-------NK 128
           + + L+AWL EH  +PYP   +K+MLA  T +T +QVS WF NAR RL K         +
Sbjct: 434 AVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEE 493

Query: 129 MTWEPKNKTDDDDDAIISDCDEKD 152
           +  EP N + D+++   S+   K+
Sbjct: 494 VKQEPNNSSQDNNNTKGSNESSKE 517


>gi|161612085|gb|AAI55782.1| Pknox1.1 protein [Danio rerio]
          Length = 433

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 59  YGAGYDLAARRKNAT--RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           +  G D + + K     +++T  +++WL +H  +PYPT+ EK  +A  T +TL QV+ WF
Sbjct: 258 FFGGDDSSPKNKRGVLPKQATNVMRSWLFQHIAHPYPTEEEKKQIATQTNLTLLQVNNWF 317

Query: 117 ANARRRL 123
            NARRR+
Sbjct: 318 INARRRI 324


>gi|66814032|ref|XP_641195.1| hypothetical protein DDB_G0280473 [Dictyostelium discoideum AX4]
 gi|74997091|sp|Q54VB4.1|HBX9_DICDI RecName: Full=Homeobox protein 9; Short=DdHbx-9
 gi|60469220|gb|EAL67215.1| hypothetical protein DDB_G0280473 [Dictyostelium discoideum AX4]
          Length = 639

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/56 (46%), Positives = 37/56 (66%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +R     E+T+ LK WL EH  +PYPT+ EK+ LA  T ++  Q++ WF NARRR+
Sbjct: 562 KRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTFLSFNQINNWFTNARRRI 617


>gi|340723000|ref|XP_003399887.1| PREDICTED: homeobox protein PKNOX2-like [Bombus terrestris]
          Length = 442

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 4/76 (5%)

Query: 52  SNLTAVRYGAGYDLA--ARRKNAT--RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKM 107
           SN ++  +G  +      R+K     +++T+ ++ WL EH  +PYPT+ EK  +A  T +
Sbjct: 294 SNHSSSGHGGNHSSVKKGRQKRGVLPKQATSIMRTWLFEHLVHPYPTEDEKRQIAGQTNL 353

Query: 108 TLTQVSTWFANARRRL 123
           TL QV+ WF NARRR+
Sbjct: 354 TLLQVNNWFINARRRI 369


>gi|295913536|gb|ADG58016.1| transcription factor [Lycoris longituba]
          Length = 205

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           S + L+AWL EH  +PYP   EK+MLA  T +T  QVS WF NAR RL K
Sbjct: 128 SVSVLRAWLFEHFLHPYPNDSEKLMLARQTGLTRGQVSNWFINARVRLWK 177


>gi|358370179|dbj|GAA86791.1| homeobox and C2H2 transcription factor [Aspergillus kawachii IFO
           4308]
          Length = 858

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 54  LTAVRYGAGYDLAARRKNA--TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQ 111
           L ++ + A  D  AR+ N+   RE+   LKAWL EH ++PYPT+ EK  L   T +   Q
Sbjct: 141 LKSLGFIAEDDGRARKSNSRLAREAVRILKAWLQEHWEHPYPTEQEKDELQQRTGLKRMQ 200

Query: 112 VSTWFANARRRLK 124
           +S W ANARRR K
Sbjct: 201 ISNWLANARRRGK 213


>gi|125537542|gb|EAY84030.1| hypothetical protein OsI_39262 [Oryza sativa Indica Group]
          Length = 647

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 18/128 (14%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTAT-LKAWLNEHKKNPYPTKGEKIMLA 102
           ID+Q+ Q       +YG     A R +    E++ T L+AWL EH  +PYP   EK+MLA
Sbjct: 367 IDQQLRQQRAFQ--QYGMIPQNAWRPQRGLPENSVTILRAWLFEHFLHPYPKDSEKLMLA 424

Query: 103 IITKMTLTQVSTWFANARRRLKKENKMTWEP------KNKTDD--DDDAIISDCDEKDKD 154
             T +T +Q+S WF NAR RL       W+P      K +  D   D    SD   + KD
Sbjct: 425 RQTGLTRSQISNWFINARVRL-------WKPMIEDMYKEEIGDLEQDSNSSSDNAPRSKD 477

Query: 155 DLMMDEEK 162
            +   E+K
Sbjct: 478 KMASSEDK 485


>gi|444318077|ref|XP_004179696.1| hypothetical protein TBLA_0C03740 [Tetrapisispora blattae CBS 6284]
 gi|387512737|emb|CCH60177.1| hypothetical protein TBLA_0C03740 [Tetrapisispora blattae CBS 6284]
          Length = 293

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%)

Query: 65  LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           + ++R N  +E+   L  WL  H +NPYPT  EK  L ++T +T  Q+S WF N RRR
Sbjct: 175 MVSKRSNLPKETVQILNDWLLNHLRNPYPTPKEKSELLVLTGLTKIQLSNWFINVRRR 232


>gi|259013317|ref|NP_001158452.1| TGFB-induced factor homeobox 1 [Saccoglossus kowalevskii]
 gi|197734669|gb|ACH73230.1| TG-interacting homeobox protein [Saccoglossus kowalevskii]
          Length = 334

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 37/59 (62%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  +E+   LK WL EH+ N YP+  +K++L+    +++ QV  WF NARRR+  E
Sbjct: 43  RRGNLPKEAVNVLKNWLYEHRLNAYPSDQDKLLLSRSANLSILQVCNWFINARRRILPE 101


>gi|326670595|ref|XP_003199243.1| PREDICTED: homeobox protein PKNOX1-like [Danio rerio]
 gi|14532260|gb|AAK66560.1|AF382393_1 pbx/knotted-1 homeobox Prep1.1 [Danio rerio]
 gi|16209577|gb|AAL14114.1| homeodomain transcription factor Prep1 [Danio rerio]
          Length = 433

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 59  YGAGYDLAARRKNAT--RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           +  G D + + K     +++T  +++WL +H  +PYPT+ EK  +A  T +TL QV+ WF
Sbjct: 258 FFGGDDSSPKNKRGVLPKQATNVMRSWLFQHIAHPYPTEEEKKQIATQTNLTLLQVNNWF 317

Query: 117 ANARRRL 123
            NARRR+
Sbjct: 318 INARRRI 324


>gi|350423699|ref|XP_003493563.1| PREDICTED: homeobox protein PKNOX2-like [Bombus impatiens]
          Length = 442

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 4/76 (5%)

Query: 52  SNLTAVRYGAGYDLA--ARRKNAT--RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKM 107
           SN ++  +G  +      R+K     +++T+ ++ WL EH  +PYPT+ EK  +A  T +
Sbjct: 294 SNHSSSGHGGNHSSVKKGRQKRGVLPKQATSIMRTWLFEHLVHPYPTEDEKRQIAGQTNL 353

Query: 108 TLTQVSTWFANARRRL 123
           TL QV+ WF NARRR+
Sbjct: 354 TLLQVNNWFINARRRI 369


>gi|340960197|gb|EGS21378.1| putative sequence-specific DNA binding protein [Chaetomium
           thermophilum var. thermophilum DSM 1495]
          Length = 1216

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 35/52 (67%)

Query: 73  TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           +RES   LK WL+ H K+PYPT+ EK ML   T +T TQ++ W AN RRR K
Sbjct: 196 SRESVKILKNWLSTHSKHPYPTEEEKEMLQKQTGLTKTQITNWLANTRRRNK 247


>gi|310798324|gb|EFQ33217.1| hypothetical protein GLRG_08361 [Glomerella graminicola M1.001]
          Length = 1252

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 55  TAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVST 114
           TA R      + AR    +RES   LK WL+ H ++PYP+  EK ML   T +  TQ++ 
Sbjct: 230 TASRMATPAKVGAR---FSRESVRILKNWLSTHTRHPYPSDEEKEMLQRQTGLNKTQITN 286

Query: 115 WFANARRRLKKENKMTWEPKNKT 137
           W ANARRR K +   +  P  ++
Sbjct: 287 WLANARRRGKTQPPRSTSPHPRS 309


>gi|346970331|gb|EGY13783.1| hypothetical protein VDAG_00465 [Verticillium dahliae VdLs.17]
          Length = 1180

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 38/65 (58%)

Query: 73  TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWE 132
           +RES   LK WL+ H ++PYP+  EK ML   T +  TQ++ W ANARRR K +   +  
Sbjct: 232 SRESVKILKTWLSGHNRHPYPSDEEKEMLQRQTGLNKTQITNWLANARRRGKIQPPRSTS 291

Query: 133 PKNKT 137
           P   T
Sbjct: 292 PATHT 296


>gi|326487740|dbj|BAK05542.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326495524|dbj|BAJ85858.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326503582|dbj|BAJ86297.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531470|dbj|BAJ97739.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 666

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 9/75 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK---------E 126
           S + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL K         E
Sbjct: 357 SVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEE 416

Query: 127 NKMTWEPKNKTDDDD 141
            K   + ++  DD D
Sbjct: 417 TKEHQQQQDGGDDKD 431


>gi|28797555|gb|AAO47087.1| homeodomain-containing protein [Venturia canescens]
          Length = 456

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 60  GAGYDLAARRKNAT--RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
           G G     R+K     +++T+ ++AWL  H  +PYPT+ EK  +A  T +TL QV+ WF 
Sbjct: 299 GHGSIRKGRQKRGVLPKQATSIMRAWLFHHLVHPYPTEDEKRQIASQTNLTLLQVNNWFI 358

Query: 118 NARRRL 123
           NARRR+
Sbjct: 359 NARRRI 364


>gi|67904682|ref|XP_682597.1| hypothetical protein AN9328.2 [Aspergillus nidulans FGSC A4]
 gi|40747239|gb|EAA66395.1| hypothetical protein AN9328.2 [Aspergillus nidulans FGSC A4]
 gi|259488165|tpe|CBF87412.1| TPA: Miscellaneous Zn(II)2Cys6 transcription factor (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 670

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/48 (54%), Positives = 34/48 (70%)

Query: 80  LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
           LK W ++H   PYP+K EK  LA  + +TLTQ+STWFAN RRR K ++
Sbjct: 115 LKKWFDQHCDKPYPSKEEKTELASRSGLTLTQISTWFANTRRRRKNKS 162


>gi|327297412|ref|XP_003233400.1| hypothetical protein TERG_06389 [Trichophyton rubrum CBS 118892]
 gi|326464706|gb|EGD90159.1| hypothetical protein TERG_06389 [Trichophyton rubrum CBS 118892]
          Length = 351

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 10/81 (12%)

Query: 52  SNLTAVRYGAGYDLAA----------RRKNATRESTATLKAWLNEHKKNPYPTKGEKIML 101
           S     R  +GY L+           RR N  +  T  L+AWL EH  +PYPT+ +K + 
Sbjct: 222 STFGHFRPASGYCLSECELGDMREKKRRGNLPKPVTDMLRAWLWEHLDHPYPTEEDKQIF 281

Query: 102 AIITKMTLTQVSTWFANARRR 122
              T +T++Q+S WF NARRR
Sbjct: 282 MSRTGLTISQISNWFINARRR 302


>gi|242807242|ref|XP_002484914.1| homeobox transcription factor, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218715539|gb|EED14961.1| homeobox transcription factor, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 328

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 35/55 (63%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYPT+ +K      T +T++Q+S WF NARRR
Sbjct: 236 RRGNLPKNVTDVLRAWFHEHLDHPYPTEEDKQRFMNETNLTMSQISNWFINARRR 290


>gi|270007349|gb|EFA03797.1| hypothetical protein TcasGA2_TC013909 [Tribolium castaneum]
          Length = 339

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR +  +++   LK WL EH+ N YPT+ EK +L+  T +T+ Q+S WF NARRR
Sbjct: 50  RRGHLPKDAVKILKNWLYEHRFNAYPTEVEKNILSQETNLTVLQISNWFINARRR 104


>gi|380022802|ref|XP_003695225.1| PREDICTED: homeobox protein unc-62-like [Apis florea]
          Length = 485

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 36/50 (72%)

Query: 74  RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +++T+ ++ WL EH  +PYPT+ EK  +A  T +TL QV+ WF NARRR+
Sbjct: 363 KQATSIMRTWLFEHLVHPYPTEDEKRQIASQTNLTLLQVNNWFINARRRI 412


>gi|24119266|ref|NP_705940.1| homeobox protein PKNOX2 [Danio rerio]
 gi|23495538|dbj|BAC20216.1| TALE homeodomain transcription factor Prep2 [Danio rerio]
 gi|108742153|gb|AAI17640.1| Pbx/knotted 1 homeobox 2 [Danio rerio]
          Length = 474

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 43  GIDKQVIQVSN------LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKG 96
           G+ +  IQ+ N      L+++  G       +R    + +T  +++WL +H  +PYPT+ 
Sbjct: 260 GLPQGTIQIQNNQVNLDLSSLLDGDDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTED 319

Query: 97  EKIMLAIITKMTLTQVSTWFANARRRL 123
           EK  +A  T +TL QV+ WF NARRR+
Sbjct: 320 EKRQIAAQTNLTLLQVNNWFINARRRI 346


>gi|357115612|ref|XP_003559582.1| PREDICTED: BEL1-like homeodomain protein 10-like [Brachypodium
           distachyon]
          Length = 352

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%)

Query: 75  ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           +S A L+AWL +H  +PYP+  EK+ LA+ T ++  Q+S WF NAR RL K
Sbjct: 278 DSVAVLRAWLFDHFLDPYPSDNEKLRLAVSTGLSRGQISNWFINARVRLWK 328


>gi|110761702|ref|XP_001120618.1| PREDICTED: homeobox protein PKNOX2-like [Apis mellifera]
          Length = 441

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 36/50 (72%)

Query: 74  RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +++T+ ++ WL EH  +PYPT+ EK  +A  T +TL QV+ WF NARRR+
Sbjct: 319 KQATSIMRTWLFEHLVHPYPTEDEKRQIASQTNLTLLQVNNWFINARRRI 368


>gi|297798454|ref|XP_002867111.1| hypothetical protein ARALYDRAFT_912924 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312947|gb|EFH43370.1| hypothetical protein ARALYDRAFT_912924 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 536

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 57/132 (43%), Gaps = 21/132 (15%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK---------- 125
           S   L+AWL EH  +PYP   +KIMLA  T ++  QVS WF NAR RL K          
Sbjct: 329 SVLILRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQVSNWFINARVRLWKPMVEEIYKEE 388

Query: 126 --ENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHR-------MVKGHFPH 176
             EN      +N     +    +  DE    +   D+ K    H+       MV+G   H
Sbjct: 389 FTENDSNSSSENTPKMSEIGHAAAVDEDRAQEFSQDQTKPDHGHKYGEETRGMVQG--SH 446

Query: 177 MYVTKYETLPPT 188
           M   K+  + PT
Sbjct: 447 MDGRKFMAVEPT 458


>gi|158285491|ref|XP_308339.4| AGAP007539-PA [Anopheles gambiae str. PEST]
 gi|157020018|gb|EAA04607.4| AGAP007539-PA [Anopheles gambiae str. PEST]
          Length = 396

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 36/50 (72%)

Query: 74  RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           + +T+ ++AWL +H  +PYPT+ EK  +A  T +TL QV+ WF NARRR+
Sbjct: 333 KHATSVMRAWLFQHLVHPYPTEDEKRAIAAQTNLTLLQVNNWFINARRRI 382


>gi|302422686|ref|XP_003009173.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261352319|gb|EEY14747.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 1175

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 38/65 (58%)

Query: 73  TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWE 132
           +RES   LK WL+ H ++PYP+  EK ML   T +  TQ++ W ANARRR K +   +  
Sbjct: 227 SRESVKILKTWLSGHNRHPYPSDEEKEMLQRQTGLNKTQITNWLANARRRGKIQPPRSTS 286

Query: 133 PKNKT 137
           P   T
Sbjct: 287 PATHT 291


>gi|417400912|gb|JAA47372.1| Putative transcription factor meis1 [Desmodus rotundus]
          Length = 436

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 38/56 (67%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +R    + +T+ +++WL +H  +PYPT+ EK  +A  T +TL QV+ WF NARRR+
Sbjct: 262 KRGVLPKHATSVMRSWLFQHIGHPYPTEDEKKQIAAQTSLTLLQVNNWFINARRRI 317


>gi|357152962|ref|XP_003576293.1| PREDICTED: BEL1-like homeodomain protein 1-like [Brachypodium
           distachyon]
          Length = 671

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL       W+P
Sbjct: 373 SVSVLRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRL-------WKP 423


>gi|356517887|ref|XP_003527617.1| PREDICTED: BEL1-like homeodomain protein 6-like [Glycine max]
          Length = 645

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S   L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL       W+P
Sbjct: 412 SVVILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRL-------WKP 462


>gi|326496477|dbj|BAJ94700.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 580

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 8/92 (8%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPK- 134
           + + L+AWL EH  +PYPT  +K MLA  T +T  QVS WF NAR RL       W+P  
Sbjct: 338 AVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRL-------WKPMV 390

Query: 135 NKTDDDDDAIISDCDEKDKDDLMMDEEKMKQH 166
            +  + +          DK+ L   +++M+QH
Sbjct: 391 EEIHNLEMRQGHKSSGADKNQLGSAQQQMQQH 422


>gi|431901451|gb|ELK08473.1| Homeobox protein PKNOX1 [Pteropus alecto]
          Length = 436

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 38/56 (67%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +R    + +T+ +++WL +H  +PYPT+ EK  +A  T +TL QV+ WF NARRR+
Sbjct: 262 KRGVLPKHATSVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317


>gi|242086458|ref|XP_002443654.1| hypothetical protein SORBIDRAFT_08g022960 [Sorghum bicolor]
 gi|241944347|gb|EES17492.1| hypothetical protein SORBIDRAFT_08g022960 [Sorghum bicolor]
          Length = 658

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 10/91 (10%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTAT-LKAWLNEHKKNPYPTKGEKIMLA 102
           ID+Q+ Q       +YG     A R +    E++ T L+AWL EH  +PYP   EK+MLA
Sbjct: 368 IDQQLRQQRAFQ--QYGMIPQNAWRPQRGLPENSVTILRAWLFEHFLHPYPKDSEKLMLA 425

Query: 103 IITKMTLTQVSTWFANARRRLKKENKMTWEP 133
             T +T +Q+S WF NAR RL       W+P
Sbjct: 426 RQTGLTRSQISNWFINARVRL-------WKP 449


>gi|350411112|ref|XP_003489245.1| PREDICTED: homeobox protein AKR-like isoform 1 [Bombus impatiens]
          Length = 320

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 38/70 (54%)

Query: 57  VRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           V +   + +  RR N  + S   LK WL EH+ N YP+  EK  L+    +T+ QV  WF
Sbjct: 41  VHHSGNHSVRKRRGNLPKTSVKILKRWLYEHRYNAYPSDNEKQELSQEAHLTVLQVCNWF 100

Query: 117 ANARRRLKKE 126
            NARRR+  E
Sbjct: 101 INARRRILPE 110


>gi|350538443|ref|NP_001234599.1| bell-like homeodomain protein 2 [Solanum lycopersicum]
 gi|31323447|gb|AAP47025.1|AF375966_1 bell-like homeodomain protein 2 [Solanum lycopersicum]
          Length = 699

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK---ENKMTWE 132
           + + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL K   E     E
Sbjct: 415 AVSVLRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEE 474

Query: 133 PKNKTDDDDDAIISDCDEKDKD 154
            KN+  +  +   +  D K+K+
Sbjct: 475 VKNQEQNSSN---TSGDNKNKE 493


>gi|383858979|ref|XP_003704976.1| PREDICTED: homeobox protein PKNOX2-like [Megachile rotundata]
          Length = 443

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 36/50 (72%)

Query: 74  RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +++T+ ++ WL EH  +PYPT+ EK  +A  T +TL QV+ WF NARRR+
Sbjct: 319 KQATSIMRTWLFEHLVHPYPTEDEKRQIASQTNLTLLQVNNWFINARRRI 368


>gi|212538205|ref|XP_002149258.1| homeobox transcription factor, putative [Talaromyces marneffei ATCC
           18224]
 gi|210069000|gb|EEA23091.1| homeobox transcription factor, putative [Talaromyces marneffei ATCC
           18224]
          Length = 311

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYPT+ +K +    T ++++Q+S WF NARRR
Sbjct: 210 RRGNLPKPVTDVLRAWFHEHLDHPYPTEEDKQIFMSRTGLSISQISNWFINARRR 264


>gi|340517663|gb|EGR47906.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1117

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 37/61 (60%)

Query: 73  TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWE 132
           +RES   LK WL+ H ++PYP+  EK ML   T +  TQ++ W ANARRR K +   +  
Sbjct: 138 SRESVRILKNWLSTHNRHPYPSDEEKEMLQRQTGLNKTQITNWLANARRRGKAQPPRSTS 197

Query: 133 P 133
           P
Sbjct: 198 P 198


>gi|242088147|ref|XP_002439906.1| hypothetical protein SORBIDRAFT_09g022270 [Sorghum bicolor]
 gi|241945191|gb|EES18336.1| hypothetical protein SORBIDRAFT_09g022270 [Sorghum bicolor]
          Length = 570

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 9/93 (9%)

Query: 41  LCGIDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIM 100
           L G    +++ +N+ A  +G  +++   ++     + + L++WL EH  +PYPT  +K M
Sbjct: 300 LMGGGAGLLRGNNVNA--FGQPHNIWRPQRGLPERAVSVLRSWLFEHFLHPYPTDSDKQM 357

Query: 101 LAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           LA  T +T  QVS WF NAR RL       W+P
Sbjct: 358 LAKQTGLTRNQVSNWFINARVRL-------WKP 383


>gi|410074849|ref|XP_003955007.1| hypothetical protein KAFR_0A04370 [Kazachstania africana CBS 2517]
 gi|372461589|emb|CCF55872.1| hypothetical protein KAFR_0A04370 [Kazachstania africana CBS 2517]
          Length = 409

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL--- 123
            +R N  +E+   L  WL  H  NPYPT  EK  L   T +T  Q+S WF N RRR    
Sbjct: 270 GKRSNLPKETVQILNNWLVNHLGNPYPTAIEKNELLKQTGLTKIQLSNWFINVRRRKVFT 329

Query: 124 ----KKENKMTWEPKNK--TDDDDDAIISD 147
                 ENK+T E  N+    DDD+ I+S+
Sbjct: 330 DYFDSPENKITMEANNQHLKKDDDNFILSN 359


>gi|413925649|gb|AFW65581.1| putative POX domain/homeobox DNA-binding domain family protein
           isoform 1 [Zea mays]
 gi|413925650|gb|AFW65582.1| putative POX domain/homeobox DNA-binding domain family protein
           isoform 2 [Zea mays]
 gi|413925651|gb|AFW65583.1| putative POX domain/homeobox DNA-binding domain family protein
           isoform 3 [Zea mays]
 gi|413925652|gb|AFW65584.1| putative POX domain/homeobox DNA-binding domain family protein
           isoform 4 [Zea mays]
 gi|413925653|gb|AFW65585.1| putative POX domain/homeobox DNA-binding domain family protein
           isoform 5 [Zea mays]
 gi|413925654|gb|AFW65586.1| putative POX domain/homeobox DNA-binding domain family protein
           isoform 6 [Zea mays]
          Length = 671

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL       W+P
Sbjct: 369 SVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRL-------WKP 419


>gi|414864987|tpg|DAA43544.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           [Zea mays]
          Length = 343

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           + + L+AWL EH  +PYP   EK+MLA  T ++  QVS WF NAR RL K    +M  E 
Sbjct: 101 AVSVLRAWLFEHFLHPYPKDSEKLMLARQTGLSRGQVSNWFINARVRLWKPMIEEMYREE 160

Query: 134 KNKTDDDDDAIISDCDEKDKDDLMMDEE 161
                D   +  +    K KD+ +  E+
Sbjct: 161 FGAEMDSHSSSENAAGNKGKDEAISSED 188


>gi|22652115|gb|AAN03621.1|AF406697_1 BEL1-related homeotic protein 5 [Solanum tuberosum]
          Length = 688

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           + + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL       W+P
Sbjct: 403 AVSVLRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRL-------WKP 453


>gi|357624437|gb|EHJ75219.1| achintya [Danaus plexippus]
          Length = 284

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 35/59 (59%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  + S   LK WL +H+ N YP+  EK+ L+    +T+ QV  WF NARRR+  E
Sbjct: 50  RRGNLPKNSVRILKRWLYDHRYNAYPSDAEKLALSQEANLTVLQVCNWFINARRRILPE 108


>gi|312281641|dbj|BAJ33686.1| unnamed protein product [Thellungiella halophila]
          Length = 554

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S + L+AWL EH  +PYP + EK+MLA  T ++  QV+ WF NAR RL       W+P
Sbjct: 376 SVSALRAWLFEHFLHPYPKESEKVMLAKQTGLSKNQVANWFINARVRL-------WKP 426


>gi|32451815|gb|AAH54667.1| Pknox1.1 protein [Danio rerio]
          Length = 377

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 59  YGAGYDLAARRKNAT--RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
           +  G D + + K     +++T  +++WL +H  +PYPT+ EK  +A  T +TL QV+ WF
Sbjct: 258 FFGGDDSSPKNKRGVLPKQATNVMRSWLFQHIAHPYPTEEEKKQIATQTNLTLLQVNNWF 317

Query: 117 ANARRRL 123
            NARRR+
Sbjct: 318 INARRRI 324


>gi|431894355|gb|ELK04155.1| Homeobox protein TGIF2 [Pteropus alecto]
          Length = 237

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|358398154|gb|EHK47512.1| hypothetical protein TRIATDRAFT_255946 [Trichoderma atroviride IMI
           206040]
          Length = 178

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 35/55 (63%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  R++T  L+AW ++H  +PYPT+ EK      T + + Q+S WF NARRR
Sbjct: 50  RRGNLPRDTTDKLRAWFDDHLSHPYPTEDEKQEFIRRTGLQMNQISNWFINARRR 104


>gi|170089179|ref|XP_001875812.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649072|gb|EDR13314.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 585

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +R    +E+T  LKAWL+ H  +PYP++ EK  L   T ++++QVS W  NARRR+
Sbjct: 354 KRGKLPKETTDYLKAWLHRHSDHPYPSEDEKKQLCHATGLSMSQVSNWMINARRRI 409


>gi|237649078|ref|NP_001153690.1| TGIF-like [Nasonia vitripennis]
          Length = 367

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 34/56 (60%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  + S   LK WL +H+ N YP+  EKI L+    +T+ QV  WF NARRR+
Sbjct: 117 RRGNLPKHSVKILKRWLYDHRYNAYPSDTEKITLSEEANLTVLQVCNWFINARRRI 172


>gi|413925655|gb|AFW65587.1| putative POX domain/homeobox DNA-binding domain family protein [Zea
           mays]
          Length = 635

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL       W+P
Sbjct: 333 SVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRL-------WKP 383


>gi|351700685|gb|EHB03604.1| Homeobox protein PKNOX1 [Heterocephalus glaber]
          Length = 436

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 12/105 (11%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK-- 125
           +R    + +T  +++WL +H  +PYPT+ EK  +A  T +TL QV+ WF NARRR+ +  
Sbjct: 262 KRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQPM 321

Query: 126 -ENKMTWEPKNKTDDDD---------DAIISDCDEKDKDDLMMDE 160
            ++  +  PK K              D+I+S   +    +L M E
Sbjct: 322 LDSSCSETPKTKKKTGQNRPVQRFWPDSIVSGVAQAPPSELAMSE 366


>gi|401623288|gb|EJS41392.1| cup9p [Saccharomyces arboricola H-6]
          Length = 286

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           + RR N  +E+   L  WL  H  NPYPT+ EK  L I T +T  Q+S WF N RRR
Sbjct: 147 SGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 203


>gi|365758095|gb|EHM99956.1| Cup9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 295

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           + RR N  +E+   L  WL  H  NPYPT+ EK  L I T +T  Q+S WF N RRR
Sbjct: 152 SGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 208


>gi|432101436|gb|ELK29618.1| Homeobox protein TGIF2 [Myotis davidii]
          Length = 237

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|310789492|gb|EFQ25025.1| homeobox domain-containing protein [Glomerella graminicola M1.001]
          Length = 403

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 43/80 (53%)

Query: 43  GIDKQVIQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLA 102
           G   + +++  L+A+          RR N  +E+T  L+AW   H  +PYPT+ EK  L 
Sbjct: 254 GHYPEFMRIGELSAMGMHGDSKQRKRRGNLPKETTDKLRAWFVAHLHHPYPTEDEKQELM 313

Query: 103 IITKMTLTQVSTWFANARRR 122
             T + + Q+S WF NARRR
Sbjct: 314 RQTGLQMNQISNWFINARRR 333


>gi|432928349|ref|XP_004081155.1| PREDICTED: homeobox protein AKR-like [Oryzias latipes]
          Length = 302

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 36/56 (64%)

Query: 71  NATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           N  +ES   L+ WL EH+ N YP++ EK +L+  T+++  QV  WF NARRRL  E
Sbjct: 42  NLPKESVQILRDWLYEHRYNAYPSEQEKALLSKQTQLSTLQVCNWFINARRRLLPE 97


>gi|326472440|gb|EGD96449.1| hypothetical protein TESG_03892 [Trichophyton tonsurans CBS 112818]
          Length = 351

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AWL EH  +PYPT+ +K +    T +T++Q+S WF NARRR
Sbjct: 248 RRGNLPKPVTDMLRAWLWEHLDHPYPTEEDKQIFMSRTGLTISQISNWFINARRR 302


>gi|315044663|ref|XP_003171707.1| AhpA protein [Arthroderma gypseum CBS 118893]
 gi|311344050|gb|EFR03253.1| AhpA protein [Arthroderma gypseum CBS 118893]
          Length = 350

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AWL EH  +PYPT+ +K +    T +T++Q+S WF NARRR
Sbjct: 247 RRGNLPKPVTDMLRAWLWEHLDHPYPTEEDKQIFMSRTGLTISQISNWFINARRR 301


>gi|187940726|gb|ACD39464.1| BEL5 protein [Solanum palustre]
          Length = 698

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           + + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL       W+P
Sbjct: 412 AVSVLRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRL-------WKP 462


>gi|395830134|ref|XP_003788190.1| PREDICTED: homeobox protein TGIF2 [Otolemur garnettii]
          Length = 237

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|187940734|gb|ACD39468.1| BEL5 protein [Solanum etuberosum]
          Length = 698

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           + + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL       W+P
Sbjct: 412 AVSVLRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRL-------WKP 462


>gi|91087887|ref|XP_970138.1| PREDICTED: similar to Homeobox protein PKNOX2 (PBX/knotted homeobox
           2) (Homeobox protein PREP-2) [Tribolium castaneum]
 gi|270011945|gb|EFA08393.1| hypothetical protein TcasGA2_TC006040 [Tribolium castaneum]
          Length = 437

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 38/56 (67%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +R    + +T+ +++WL +H  +PYPT+ EK  +A  T +TL QV+ WF NARRR+
Sbjct: 279 KRGVLPKHATSVMRSWLFQHLVHPYPTEDEKRHIAAQTNLTLLQVNNWFINARRRI 334


>gi|338719254|ref|XP_003363969.1| PREDICTED: uncharacterized protein C20orf24 homolog isoform 2
           [Equus caballus]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|201066403|ref|NP_001128455.1| homeobox protein TGIF2 [Rattus norvegicus]
 gi|149030807|gb|EDL85834.1| rCG37402, isoform CRA_a [Rattus norvegicus]
 gi|149030808|gb|EDL85835.1| rCG37402, isoform CRA_a [Rattus norvegicus]
 gi|197245735|gb|AAI68719.1| RGD1564927 protein [Rattus norvegicus]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|403281145|ref|XP_003932059.1| PREDICTED: uncharacterized protein C20orf24 homolog [Saimiri
           boliviensis boliviensis]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|344279937|ref|XP_003411742.1| PREDICTED: uncharacterized protein C20orf24 homolog isoform 1
           [Loxodonta africana]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|291223983|ref|XP_002731987.1| PREDICTED: PKnox transcription factor, partial [Saccoglossus
           kowalevskii]
          Length = 529

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)

Query: 64  DLAARRKN----ATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANA 119
           DL  +RKN      +++T  +++WL +H  +PYPT+ EK  +A  T ++L QV+ WF NA
Sbjct: 405 DLLNKRKNKRGVLPKQATNVMRSWLFQHIVHPYPTEDEKRQIASQTNLSLLQVNNWFINA 464

Query: 120 RRRL 123
           RRR+
Sbjct: 465 RRRI 468


>gi|410953892|ref|XP_003983602.1| PREDICTED: uncharacterized protein C20orf24 homolog isoform 3
           [Felis catus]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|296199675|ref|XP_002747260.1| PREDICTED: homeobox protein TGIF2-like isoform 1 [Callithrix
           jacchus]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|348563775|ref|XP_003467682.1| PREDICTED: homeobox protein TGIF2-like [Cavia porcellus]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|302565562|ref|NP_001181676.1| homeobox protein TGIF2 [Macaca mulatta]
 gi|297259896|ref|XP_002798197.1| PREDICTED: homeobox protein TGIF2-like isoform 1 [Macaca mulatta]
 gi|297259900|ref|XP_002798199.1| PREDICTED: homeobox protein TGIF2-like isoform 3 [Macaca mulatta]
 gi|297259902|ref|XP_002798200.1| PREDICTED: homeobox protein TGIF2-like isoform 4 [Macaca mulatta]
 gi|402882625|ref|XP_003904838.1| PREDICTED: uncharacterized protein C20orf24 homolog [Papio anubis]
 gi|355563168|gb|EHH19730.1| 5'-TG-3'-interacting factor 2 [Macaca mulatta]
 gi|355784524|gb|EHH65375.1| 5'-TG-3'-interacting factor 2 [Macaca fascicularis]
 gi|383410251|gb|AFH28339.1| homeobox protein TGIF2 [Macaca mulatta]
 gi|384939502|gb|AFI33356.1| homeobox protein TGIF2 [Macaca mulatta]
 gi|384939504|gb|AFI33357.1| homeobox protein TGIF2 [Macaca mulatta]
 gi|387540230|gb|AFJ70742.1| homeobox protein TGIF2 [Macaca mulatta]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|133778698|gb|AAI33869.1| Irx5a protein [Danio rerio]
          Length = 290

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 6/71 (8%)

Query: 111 QVSTWFANARRRLKKENKMTWEPKNKTDDDD-----DAIISDCDEKDKDDLMMDEEKMKQ 165
           QVSTWFANARRRLKKENKMTW P+N+++D++     D   +D DE +K     D    + 
Sbjct: 1   QVSTWFANARRRLKKENKMTWTPRNRSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEA 60

Query: 166 HHRMVK-GHFP 175
            H+++  G  P
Sbjct: 61  DHKLINPGEIP 71


>gi|11141881|ref|NP_068581.1| homeobox protein TGIF2 [Homo sapiens]
 gi|313747517|ref|NP_001186442.1| homeobox protein TGIF2 [Homo sapiens]
 gi|313747519|ref|NP_001186443.1| homeobox protein TGIF2 [Homo sapiens]
 gi|313747521|ref|NP_001186444.1| homeobox protein TGIF2 [Homo sapiens]
 gi|297707008|ref|XP_002830311.1| PREDICTED: homeobox protein TGIF2 isoform 2 [Pongo abelii]
 gi|297707010|ref|XP_002830312.1| PREDICTED: homeobox protein TGIF2 isoform 3 [Pongo abelii]
 gi|297707012|ref|XP_002830313.1| PREDICTED: homeobox protein TGIF2 isoform 4 [Pongo abelii]
 gi|297707014|ref|XP_002830314.1| PREDICTED: homeobox protein TGIF2 isoform 5 [Pongo abelii]
 gi|397523873|ref|XP_003831941.1| PREDICTED: uncharacterized protein C20orf24 homolog isoform 2 [Pan
           paniscus]
 gi|397523875|ref|XP_003831942.1| PREDICTED: uncharacterized protein C20orf24 homolog isoform 3 [Pan
           paniscus]
 gi|397523877|ref|XP_003831943.1| PREDICTED: uncharacterized protein C20orf24 homolog isoform 4 [Pan
           paniscus]
 gi|397523879|ref|XP_003831944.1| PREDICTED: uncharacterized protein C20orf24 homolog isoform 5 [Pan
           paniscus]
 gi|27805750|sp|Q9GZN2.1|TGIF2_HUMAN RecName: Full=Homeobox protein TGIF2; AltName:
           Full=5'-TG-3'-interacting factor 2; AltName:
           Full=TGF-beta-induced transcription factor 2;
           Short=TGFB-induced factor 2
 gi|10798762|dbj|BAB16424.1| TGIF2 [Homo sapiens]
 gi|15215445|gb|AAH12816.1| TGFB-induced factor homeobox 2 [Homo sapiens]
 gi|16306853|gb|AAH06549.1| TGFB-induced factor homeobox 2 [Homo sapiens]
 gi|22760484|dbj|BAC11216.1| unnamed protein product [Homo sapiens]
 gi|119596533|gb|EAW76127.1| TGFB-induced factor 2 (TALE family homeobox), isoform CRA_a [Homo
           sapiens]
 gi|119596534|gb|EAW76128.1| TGFB-induced factor 2 (TALE family homeobox), isoform CRA_a [Homo
           sapiens]
 gi|123993449|gb|ABM84326.1| TGFB-induced factor 2 (TALE family homeobox) [synthetic construct]
 gi|124000421|gb|ABM87719.1| TGFB-induced factor 2 (TALE family homeobox) [synthetic construct]
 gi|189054120|dbj|BAG36640.1| unnamed protein product [Homo sapiens]
 gi|208968797|dbj|BAG74237.1| TGFB-induced factor homeobox 2 [synthetic construct]
 gi|410209794|gb|JAA02116.1| TGFB-induced factor homeobox 2 [Pan troglodytes]
 gi|410248722|gb|JAA12328.1| TGFB-induced factor homeobox 2 [Pan troglodytes]
 gi|410303084|gb|JAA30142.1| TGFB-induced factor homeobox 2 [Pan troglodytes]
 gi|410337411|gb|JAA37652.1| TGFB-induced factor homeobox 2 [Pan troglodytes]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|426391579|ref|XP_004062148.1| PREDICTED: uncharacterized protein C20orf24 homolog [Gorilla
           gorilla gorilla]
 gi|426391581|ref|XP_004062149.1| PREDICTED: uncharacterized protein C20orf24 homolog [Gorilla
           gorilla gorilla]
 gi|426391583|ref|XP_004062150.1| PREDICTED: uncharacterized protein C20orf24 homolog [Gorilla
           gorilla gorilla]
 gi|426391585|ref|XP_004062151.1| PREDICTED: uncharacterized protein C20orf24 homolog [Gorilla
           gorilla gorilla]
 gi|426391587|ref|XP_004062152.1| PREDICTED: uncharacterized protein C20orf24 homolog [Gorilla
           gorilla gorilla]
 gi|426391589|ref|XP_004062153.1| PREDICTED: uncharacterized protein C20orf24 homolog [Gorilla
           gorilla gorilla]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|380494334|emb|CCF33229.1| hypothetical protein CH063_05452 [Colletotrichum higginsianum]
          Length = 1262

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 39/65 (60%)

Query: 73  TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWE 132
           +RES   LK WL+ H ++PYP+  EK ML   T +  TQ++ W ANARRR K +   +  
Sbjct: 247 SRESVRILKNWLSTHTRHPYPSDEEKEMLQRQTGLNKTQITNWLANARRRGKTQAPRSTS 306

Query: 133 PKNKT 137
           P  ++
Sbjct: 307 PHPRS 311


>gi|326481663|gb|EGE05673.1| AhpA protein [Trichophyton equinum CBS 127.97]
          Length = 351

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AWL EH  +PYPT+ +K +    T +T++Q+S WF NARRR
Sbjct: 248 RRGNLPKPVTDMLRAWLWEHLDHPYPTEEDKQIFMSRTGLTISQISNWFINARRR 302


>gi|291388642|ref|XP_002710826.1| PREDICTED: TGFB-induced factor homeobox 2 [Oryctolagus cuniculus]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|301762122|ref|XP_002916467.1| PREDICTED: homeobox protein TGIF2-like [Ailuropoda melanoleuca]
 gi|281346072|gb|EFB21656.1| hypothetical protein PANDA_004551 [Ailuropoda melanoleuca]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|413933436|gb|AFW67987.1| putative POX domain/homeobox DNA-binding domain family protein [Zea
           mays]
          Length = 639

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S + L+AWL EH  +PYP   EK+ML+  T +T +Q+S WF NAR RL       W+P
Sbjct: 393 SVSILRAWLFEHFLHPYPKDSEKLMLSRQTGLTRSQISNWFINARVRL-------WKP 443


>gi|226290378|gb|EEH45862.1| homeobox transcription factor [Paracoccidioides brasiliensis Pb18]
          Length = 611

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +  T  L+AW +EH  +PYP++ +K M    T +T++Q+S WF NARRR
Sbjct: 439 RRGNLPKSVTDVLRAWFHEHLDHPYPSEEDKQMFISRTGLTISQISNWFINARRR 493


>gi|301606583|ref|XP_002932897.1| PREDICTED: homeobox protein TGIF2 isoform 1 [Xenopus (Silurana)
           tropicalis]
          Length = 266

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 38/59 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  +++   L+ WL EH+ N YP++ EK+ L+  T +T+ Q+  WF NARRR+  E
Sbjct: 41  RRGNLPKDAVKILRDWLFEHRFNAYPSEQEKLSLSGQTNLTVLQICNWFINARRRVLPE 99


>gi|222616675|gb|EEE52807.1| hypothetical protein OsJ_35304 [Oryza sativa Japonica Group]
          Length = 591

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           + + L+AWL EH  +PYP   +K+MLA  T +T +QVS WF NAR RL       W+P
Sbjct: 302 AVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRL-------WKP 352


>gi|109505011|ref|XP_001061465.1| PREDICTED: homeobox protein TGIF2-like [Rattus norvegicus]
 gi|392333920|ref|XP_003753036.1| PREDICTED: homeobox protein TGIF2-like [Rattus norvegicus]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|351702527|gb|EHB05446.1| Homeobox protein TGIF2 [Heterocephalus glaber]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|414864990|tpg|DAA43547.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           isoform 1 [Zea mays]
 gi|414864991|tpg|DAA43548.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           isoform 2 [Zea mays]
 gi|414864992|tpg|DAA43549.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           isoform 3 [Zea mays]
 gi|414864993|tpg|DAA43550.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           isoform 4 [Zea mays]
          Length = 587

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           + + L+AWL EH  +PYP   EK+MLA  T ++  QVS WF NAR RL K    +M  E 
Sbjct: 345 AVSVLRAWLFEHFLHPYPKDSEKLMLARQTGLSRGQVSNWFINARVRLWKPMIEEMYREE 404

Query: 134 KNKTDDDDDAIISDCDEKDKDDLMMDEE 161
                D   +  +    K KD+ +  E+
Sbjct: 405 FGAEMDSHSSSENAAGNKGKDEAISSED 432


>gi|355724015|gb|AES08080.1| TGFB-induced factor homeobox 2 [Mustela putorius furo]
          Length = 236

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|357125864|ref|XP_003564609.1| PREDICTED: BEL1-like homeodomain protein 6-like [Brachypodium
           distachyon]
          Length = 612

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 40/67 (59%)

Query: 59  YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
           +G   ++   ++     S + L+AWL EH  +PYPT G+K MLA  T +T  QVS WF N
Sbjct: 367 FGQPNNIWRPQRGLPERSVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFIN 426

Query: 119 ARRRLKK 125
           AR RL K
Sbjct: 427 ARVRLWK 433


>gi|426241438|ref|XP_004014598.1| PREDICTED: uncharacterized protein C20orf24 homolog isoform 2 [Ovis
           aries]
          Length = 236

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|73991889|ref|XP_865618.1| PREDICTED: homeobox protein TGIF2 isoform 3 [Canis lupus
           familiaris]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|354469438|ref|XP_003497136.1| PREDICTED: homeobox protein TGIF2-like [Cricetulus griseus]
 gi|344241862|gb|EGV97965.1| Homeobox protein TGIF2 [Cricetulus griseus]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|329663359|ref|NP_001193014.1| homeobox protein TGIF2 [Bos taurus]
 gi|296480935|tpg|DAA23050.1| TPA: TGFB-induced factor homeobox 2-like [Bos taurus]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|259149979|emb|CAY86782.1| Cup9p [Saccharomyces cerevisiae EC1118]
          Length = 306

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           + RR N  +E+   L  WL  H  NPYPT+ EK  L I T +T  Q+S WF N RRR
Sbjct: 163 SGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 219


>gi|50288985|ref|XP_446922.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526231|emb|CAG59855.1| unnamed protein product [Candida glabrata]
          Length = 259

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 61  AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
            G     +R N  +E+   L  WL +H  NPYPT  EK+ L++ T +T  Q+S WF N R
Sbjct: 157 VGQGAVKKRANLPKETVKILNEWLYDHINNPYPTPQEKMELSLKTGLTKIQLSNWFINVR 216

Query: 121 RR 122
           RR
Sbjct: 217 RR 218


>gi|6325080|ref|NP_015148.1| Cup9p [Saccharomyces cerevisiae S288c]
 gi|1169136|sp|P41817.1|CUP9_YEAST RecName: Full=Homeobox protein CUP9
 gi|598432|gb|AAA66189.1| homeodomain protein [Saccharomyces cerevisiae]
 gi|1370373|emb|CAA97884.1| CUP9 [Saccharomyces cerevisiae]
 gi|51013279|gb|AAT92933.1| YPL177C [Saccharomyces cerevisiae]
 gi|190407784|gb|EDV11049.1| DNA binding protein [Saccharomyces cerevisiae RM11-1a]
 gi|285815365|tpg|DAA11257.1| TPA: Cup9p [Saccharomyces cerevisiae S288c]
 gi|392296260|gb|EIW07363.1| Cup9p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 306

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           + RR N  +E+   L  WL  H  NPYPT+ EK  L I T +T  Q+S WF N RRR
Sbjct: 163 SGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 219


>gi|323331162|gb|EGA72580.1| Cup9p [Saccharomyces cerevisiae AWRI796]
          Length = 306

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           + RR N  +E+   L  WL  H  NPYPT+ EK  L I T +T  Q+S WF N RRR
Sbjct: 163 SGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 219


>gi|256274255|gb|EEU09163.1| Cup9p [Saccharomyces cerevisiae JAY291]
          Length = 306

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           + RR N  +E+   L  WL  H  NPYPT+ EK  L I T +T  Q+S WF N RRR
Sbjct: 163 SGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 219


>gi|440905895|gb|ELR56215.1| Homeobox protein TGIF2 [Bos grunniens mutus]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|344232189|gb|EGV64068.1| hypothetical protein CANTEDRAFT_114099 [Candida tenuis ATCC 10573]
          Length = 182

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 4/65 (6%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR----LK 124
           R N  +E+T  L  WLNEH  +PYP   EK  L + T +   Q+S WF NARRR    LK
Sbjct: 116 RNNLPKETTYVLLKWLNEHLNHPYPNSFEKNHLMMTTGLNQQQLSNWFINARRRKIKVLK 175

Query: 125 KENKM 129
           ++ +M
Sbjct: 176 EQQRM 180


>gi|301606585|ref|XP_002932898.1| PREDICTED: homeobox protein TGIF2 isoform 2 [Xenopus (Silurana)
           tropicalis]
          Length = 263

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 38/59 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
           RR N  +++   L+ WL EH+ N YP++ EK+ L+  T +T+ Q+  WF NARRR+  E
Sbjct: 38  RRGNLPKDAVKILRDWLFEHRFNAYPSEQEKLSLSGQTNLTVLQICNWFINARRRVLPE 96


>gi|151942622|gb|EDN60968.1| conserved protein [Saccharomyces cerevisiae YJM789]
          Length = 306

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           + RR N  +E+   L  WL  H  NPYPT+ EK  L I T +T  Q+S WF N RRR
Sbjct: 163 SGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 219


>gi|27734180|ref|NP_775572.1| homeobox protein TGIF2 [Mus musculus]
 gi|62901448|sp|Q8C0Y1.1|TGIF2_MOUSE RecName: Full=Homeobox protein TGIF2; AltName:
           Full=5'-TG-3'-interacting factor 2; AltName:
           Full=TGF-beta-induced transcription factor 2;
           Short=TGFB-induced factor 2
 gi|26325438|dbj|BAC26473.1| unnamed protein product [Mus musculus]
 gi|148674262|gb|EDL06209.1| TGFB-induced factor 2, isoform CRA_a [Mus musculus]
 gi|148674263|gb|EDL06210.1| TGFB-induced factor 2, isoform CRA_a [Mus musculus]
 gi|187951161|gb|AAI38706.1| Tgif2 protein [Mus musculus]
 gi|187956890|gb|AAI58023.1| TGFB-induced factor homeobox 2 [Mus musculus]
 gi|223460316|gb|AAI38707.1| Tgif2 protein [Mus musculus]
          Length = 237

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|444729186|gb|ELW69613.1| Homeobox protein TGIF2 [Tupaia chinensis]
          Length = 290

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|358394094|gb|EHK43495.1| hypothetical protein TRIATDRAFT_161626, partial [Trichoderma
           atroviride IMI 206040]
          Length = 1093

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 37/61 (60%)

Query: 73  TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWE 132
           +RES   LK WL+ H ++PYP+  EK ML   T +  TQ++ W ANARRR K +   +  
Sbjct: 173 SRESVRILKNWLSTHNRHPYPSDEEKEMLQRQTGLNKTQITNWLANARRRGKAQPPRSTS 232

Query: 133 P 133
           P
Sbjct: 233 P 233


>gi|297842287|ref|XP_002889025.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334866|gb|EFH65284.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 290

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           S A L+AWL +H  +PYP + EK++LA  T ++  QVS WF NAR RL K
Sbjct: 213 SVAILRAWLFQHFLHPYPNEAEKLVLASQTGLSKNQVSNWFINARVRLWK 262


>gi|400602129|gb|EJP69754.1| homeobox and C2H2 transcription factor [Beauveria bassiana ARSEF
           2860]
          Length = 1181

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 38/61 (62%)

Query: 73  TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWE 132
           +RES   LK WL+ H ++PYP++ EK ML   T +  TQ++ W ANARRR K +   +  
Sbjct: 197 SRESVRILKNWLSTHTRHPYPSEEEKEMLQRQTGLNKTQITNWLANARRRGKVQPPRSVS 256

Query: 133 P 133
           P
Sbjct: 257 P 257


>gi|414871943|tpg|DAA50500.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           isoform 1 [Zea mays]
 gi|414871944|tpg|DAA50501.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           isoform 2 [Zea mays]
          Length = 651

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 10/91 (10%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRE-STATLKAWLNEHKKNPYPTKGEKIMLA 102
           ID+Q+ Q       +YG     A R +    E S + L+AWL EH  +PYP   EK+ML+
Sbjct: 362 IDQQIRQQRAFQ--QYGMLQQNAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKLMLS 419

Query: 103 IITKMTLTQVSTWFANARRRLKKENKMTWEP 133
             T +T +Q+S WF NAR RL       W+P
Sbjct: 420 RQTGLTRSQISNWFINARVRL-------WKP 443


>gi|356551876|ref|XP_003544298.1| PREDICTED: BEL1-like homeodomain protein 10-like [Glycine max]
          Length = 636

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 18/115 (15%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK---------- 125
           S + L+AWL EH  +PYP   EKIMLA  T +T  QV+ WF NAR RL K          
Sbjct: 390 SVSVLRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEE 449

Query: 126 -------ENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKGH 173
                   N ++ E   K   DD     +  E+ +D+L+  ++ + QHH +   H
Sbjct: 450 FGDSEMSSNLLSSENTLKAPRDDVQASDNKREESQDNLINVDDSV-QHHGLKLDH 503


>gi|336469631|gb|EGO57793.1| hypothetical protein NEUTE1DRAFT_146316 [Neurospora tetrasperma
           FGSC 2508]
 gi|350291362|gb|EGZ72570.1| hypothetical protein NEUTE2DRAFT_170453 [Neurospora tetrasperma
           FGSC 2509]
          Length = 395

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 33/55 (60%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +E T  L AWL  H  +PYPT+ EK  +   T M + Q+S WF NARRR
Sbjct: 219 RRGNLPKEVTEKLYAWLYGHLNHPYPTEDEKQKMMRETNMQMNQISNWFINARRR 273


>gi|241998020|ref|XP_002433653.1| tgf(beta)-induced transcription factor, putative [Ixodes
           scapularis]
 gi|215495412|gb|EEC05053.1| tgf(beta)-induced transcription factor, putative [Ixodes
           scapularis]
          Length = 93

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP+  EK+ L+    +++ QV  WF NARRR+
Sbjct: 18  RRGNLPKESVKILRMWLYEHRYNAYPSDQEKLHLSREANLSVLQVCNWFINARRRI 73


>gi|449448862|ref|XP_004142184.1| PREDICTED: BEL1-like homeodomain protein 9-like [Cucumis sativus]
          Length = 461

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 1/59 (1%)

Query: 68  RRKNATRESTAT-LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           R +    ES  T L+AWL EH  +PYPT  +K+MLA  T ++ +QVS WF NAR RL K
Sbjct: 266 RPQRGLPESAVTILRAWLFEHFLHPYPTDTDKLMLANQTGLSRSQVSNWFINARVRLWK 324


>gi|226531842|ref|NP_001147963.1| BEL1-related homeotic protein 30 [Zea mays]
 gi|195614854|gb|ACG29257.1| BEL1-related homeotic protein 30 [Zea mays]
          Length = 651

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 10/91 (10%)

Query: 44  IDKQVIQVSNLTAVRYGAGYDLAARRKNATRE-STATLKAWLNEHKKNPYPTKGEKIMLA 102
           ID+Q+ Q       +YG     A R +    E S + L+AWL EH  +PYP   EK+ML+
Sbjct: 362 IDQQIRQQRAFQ--QYGMLQQNAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKLMLS 419

Query: 103 IITKMTLTQVSTWFANARRRLKKENKMTWEP 133
             T +T +Q+S WF NAR RL       W+P
Sbjct: 420 RQTGLTRSQISNWFINARVRL-------WKP 443


>gi|74185983|dbj|BAE34136.1| unnamed protein product [Mus musculus]
          Length = 198

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL  H+ N YP++ EK+ L+  T +++ Q+  WF NARRRL
Sbjct: 21  RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76


>gi|444731888|gb|ELW72223.1| Homeobox protein PKNOX2 [Tupaia chinensis]
          Length = 535

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 39/57 (68%)

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           ++R    +++T  +++WL +H  +PYPT+ EK  +A  T +TL QV+ WF NARRR+
Sbjct: 352 SKRGVLPKQATNIMRSWLFQHLMHPYPTEDEKRQIAAQTSLTLLQVNNWFINARRRI 408


>gi|242036827|ref|XP_002465808.1| hypothetical protein SORBIDRAFT_01g046170 [Sorghum bicolor]
 gi|241919662|gb|EER92806.1| hypothetical protein SORBIDRAFT_01g046170 [Sorghum bicolor]
          Length = 590

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           + + L+AWL EH  +PYP   EK+MLA  T ++  QVS WF NAR RL       W+P
Sbjct: 345 AVSVLRAWLFEHFLHPYPKDSEKLMLARQTGLSRGQVSNWFINARVRL-------WKP 395


>gi|223946255|gb|ACN27211.1| unknown [Zea mays]
          Length = 275

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           S + L+AWL EH  +PYP   EK+ML+  T +T +Q+S WF NAR RL K
Sbjct: 17  SVSILRAWLFEHFLHPYPKDSEKLMLSRQTGLTRSQISNWFINARVRLWK 66


>gi|15222227|ref|NP_177674.1| BEL1-like homeodomain 3 [Arabidopsis thaliana]
 gi|145327251|ref|NP_001077827.1| BEL1-like homeodomain 3 [Arabidopsis thaliana]
 gi|75263117|sp|Q9FWS9.1|BLH3_ARATH RecName: Full=BEL1-like homeodomain protein 3; Short=BEL1-like
           protein 3
 gi|10120440|gb|AAG13065.1|AC023754_3 Similar to homeodomain proteins [Arabidopsis thaliana]
 gi|13877515|gb|AAK43835.1|AF353093_1 BEL1-like homeodomain 3 [Arabidopsis thaliana]
 gi|21553417|gb|AAM62510.1| homeodomain protein BELL1, putative [Arabidopsis thaliana]
 gi|47059794|gb|AAT09418.1| BEL1-like homeodomain 3 protein [Arabidopsis thaliana]
 gi|332197595|gb|AEE35716.1| BEL1-like homeodomain 3 [Arabidopsis thaliana]
 gi|332197596|gb|AEE35717.1| BEL1-like homeodomain 3 [Arabidopsis thaliana]
          Length = 524

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S + L+AWL EH  +PYP + EKIML+  T ++  QV+ WF NAR RL       W+P
Sbjct: 357 SVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQVANWFINARVRL-------WKP 407


>gi|17064938|gb|AAL32623.1| Similar to homeodomain proteins [Arabidopsis thaliana]
 gi|23197850|gb|AAN15452.1| Similar to homeodomain proteins [Arabidopsis thaliana]
          Length = 524

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S + L+AWL EH  +PYP + EKIML+  T ++  QV+ WF NAR RL       W+P
Sbjct: 357 SVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQVANWFINARVRL-------WKP 407


>gi|145337579|ref|NP_177676.2| BEL1-like homeodomain 11 [Arabidopsis thaliana]
 gi|122244097|sp|Q1PFD1.1|BLH11_ARATH RecName: Full=BEL1-like homeodomain protein 11; Short=BEL1-like
           protein 11
 gi|91806093|gb|ABE65775.1| homeodomain-containing protein [Arabidopsis thaliana]
 gi|225898082|dbj|BAH30373.1| hypothetical protein [Arabidopsis thaliana]
 gi|332197598|gb|AEE35719.1| BEL1-like homeodomain 11 [Arabidopsis thaliana]
          Length = 290

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           S A L+AWL +H  +PYP + EK++LA  T ++  QVS WF NAR RL K
Sbjct: 213 SVAILRAWLFQHFLHPYPNEAEKLVLASQTGLSKNQVSNWFINARVRLWK 262


>gi|222615554|gb|EEE51686.1| hypothetical protein OsJ_33045 [Oryza sativa Japonica Group]
          Length = 641

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/50 (56%), Positives = 34/50 (68%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           S + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL K
Sbjct: 351 SVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWK 400


>gi|402077264|gb|EJT72613.1| hypothetical protein GGTG_09473 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 494

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%)

Query: 49  IQVSNLTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMT 108
           +++S L  +          RR N  +E+T  L+AW   H ++PYPT+ EK  L   T + 
Sbjct: 346 MRISELGGMGLNGDNKQRKRRGNLPKETTDKLRAWFLAHLQHPYPTEDEKQELMRQTGLQ 405

Query: 109 LTQVSTWFANARRR 122
           + Q+S WF NARRR
Sbjct: 406 MNQISNWFINARRR 419


>gi|427796219|gb|JAA63561.1| Putative tgfbeta-induced transcription factor, partial
           [Rhipicephalus pulchellus]
          Length = 409

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           RR N  +ES   L+ WL EH+ N YP+  EK+ L+    +++ QV  WF NARRR+
Sbjct: 139 RRGNLPKESVKILRMWLYEHRYNAYPSDQEKLHLSREANLSVLQVCNWFINARRRI 194


>gi|323351961|gb|EGA84500.1| Cup9p [Saccharomyces cerevisiae VL3]
          Length = 271

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           + RR N  +E+   L  WL  H  NPYPT+ EK  L I T +T  Q+S WF N RRR
Sbjct: 128 SGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 184


>gi|222635758|gb|EEE65890.1| hypothetical protein OsJ_21704 [Oryza sativa Japonica Group]
          Length = 615

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 75  ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWE 132
           +S A LKAW+ E+   PYP   EK MLA  + ++ +QVS WF NAR RL K     M  E
Sbjct: 459 KSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLWKPMIEDMYEE 518

Query: 133 PKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK---GHFPHMYVTKYE 183
            K  +   D A  ++ +     D++  E   K  H  V+    H     VT+ E
Sbjct: 519 LKKTSGGSDGA--AEIEHLSSKDVLSLERSKKPSHLAVQCDGKHHDRFAVTQME 570


>gi|218198387|gb|EEC80814.1| hypothetical protein OsI_23385 [Oryza sativa Indica Group]
          Length = 615

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 75  ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWE 132
           +S A LKAW+ E+   PYP   EK MLA  + ++ +QVS WF NAR RL K     M  E
Sbjct: 459 KSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLWKPMIEDMYEE 518

Query: 133 PKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK---GHFPHMYVTKYE 183
            K  +   D A  ++ +     D++  E   K  H  V+    H     VT+ E
Sbjct: 519 LKKTSGGSDGA--AEIEHLSSKDVLSLERSKKPSHLAVQCDGKHHDRFAVTQME 570


>gi|348537555|ref|XP_003456259.1| PREDICTED: homeobox protein PKNOX1-like [Oreochromis niloticus]
          Length = 430

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 37/56 (66%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +R    + +T  +++WL +H  +PYPT+ EK  +A  T +TL QV+ WF NARRR+
Sbjct: 269 KRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIATQTNLTLLQVNNWFINARRRI 324


>gi|323335300|gb|EGA76589.1| Cup9p [Saccharomyces cerevisiae Vin13]
          Length = 291

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           + RR N  +E+   L  WL  H  NPYPT+ EK  L I T +T  Q+S WF N RRR
Sbjct: 163 SGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 219


>gi|323302685|gb|EGA56491.1| Cup9p [Saccharomyces cerevisiae FostersB]
 gi|365762734|gb|EHN04267.1| Cup9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 271

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           + RR N  +E+   L  WL  H  NPYPT+ EK  L I T +T  Q+S WF N RRR
Sbjct: 128 SGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 184


>gi|323346136|gb|EGA80426.1| Cup9p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 271

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 66  AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           + RR N  +E+   L  WL  H  NPYPT+ EK  L I T +T  Q+S WF N RRR
Sbjct: 128 SGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 184


>gi|302142557|emb|CBI19760.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S + L+ WL EH  +PYP   EKIMLA  T +T +QV+ WF NAR RL       W+P
Sbjct: 334 SVSILRTWLFEHFLHPYPKDSEKIMLARQTGLTRSQVANWFINARVRL-------WKP 384


>gi|406864515|gb|EKD17560.1| homeobox domain-containing protein [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 443

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 35/55 (63%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
           RR N  +E+T  L+AW   H ++PYP++ EK  L   T + + Q+S WF NARRR
Sbjct: 317 RRGNLPKETTDILRAWFMSHLQHPYPSEDEKQSLMRQTGLAMNQISNWFINARRR 371


>gi|255538764|ref|XP_002510447.1| bel1 homeotic protein, putative [Ricinus communis]
 gi|223551148|gb|EEF52634.1| bel1 homeotic protein, putative [Ricinus communis]
          Length = 469

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S   L++WL EH  +PYP   EK+MLA  T +T  QVS WF NAR RL       W+P
Sbjct: 381 SVTILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRL-------WKP 431


>gi|68469130|ref|XP_721352.1| hypothetical protein CaO19.6514 [Candida albicans SC5314]
 gi|68470155|ref|XP_720839.1| hypothetical protein CaO19.13867 [Candida albicans SC5314]
 gi|77022760|ref|XP_888824.1| hypothetical protein CaO19_6514 [Candida albicans SC5314]
 gi|46442729|gb|EAL02016.1| hypothetical protein CaO19.13867 [Candida albicans SC5314]
 gi|46443267|gb|EAL02550.1| hypothetical protein CaO19.6514 [Candida albicans SC5314]
 gi|76573637|dbj|BAE44721.1| hypothetical protein [Candida albicans]
          Length = 344

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR----LK 124
           R N  +E T  L  WLN+H  +PYP+  EK  L I T +   Q+S WF NARRR    LK
Sbjct: 278 RNNLPKEITFILLQWLNDHLNHPYPSSFEKNQLMISTGLNQQQLSNWFINARRRKIKLLK 337

Query: 125 KENKMTW 131
           ++ ++ +
Sbjct: 338 QQQRLNF 344


>gi|297842285|ref|XP_002889024.1| hypothetical protein ARALYDRAFT_476691 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334865|gb|EFH65283.1| hypothetical protein ARALYDRAFT_476691 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 522

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S + L+AWL EH  +PYP + EKIML+  T ++  QV+ WF NAR RL       W+P
Sbjct: 357 SVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQVANWFINARVRL-------WKP 407


>gi|367015408|ref|XP_003682203.1| hypothetical protein TDEL_0F01810 [Torulaspora delbrueckii]
 gi|359749865|emb|CCE92992.1| hypothetical protein TDEL_0F01810 [Torulaspora delbrueckii]
          Length = 256

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 8/116 (6%)

Query: 7   ETKTLRPELQLFTQVPIQVNISSTKVPALQSRRQLCGIDKQVIQVSNLTAVRYGAGYDLA 66
           E + ++P+L    Q     + SSTK+   Q R+            +N   +  G      
Sbjct: 79  EDRLIKPQLSPPMQTEPNWSYSSTKL-HTQERKGSVNSGSSSHDANNSGGISNG------ 131

Query: 67  ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
            RR N  +E+   L  WL +H +NPYPT  EK  L I T +T  Q+S WF N RRR
Sbjct: 132 -RRSNLPKETVQILNTWLLDHLRNPYPTPQEKRELLIKTGLTKIQLSNWFINVRRR 186


>gi|110741467|dbj|BAE98691.1| putative homeodomain protein BELL1 [Arabidopsis thaliana]
          Length = 431

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 7/58 (12%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           S + L+AWL EH  +PYP + EKIML+  T ++  QV+ WF NAR RL       W+P
Sbjct: 357 SVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQVANWFINARVRL-------WKP 407


>gi|41327243|gb|AAS00123.1| X-linked TGIF-like protein [Saimiri sciureus]
          Length = 232

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)

Query: 75  ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR-LKKENKMTWEP 133
           ES   L+ W+ +H+   YP++ EK+MLA  T ++ +Q+S WF NARRR L    + +   
Sbjct: 58  ESVKILRKWMYKHRFRAYPSEAEKLMLAEKTNLSFSQISNWFVNARRRILPGMLRKSGND 117

Query: 134 KNKTDDDDDAIISDCDE 150
           +    DD+D  + D D+
Sbjct: 118 QEMRKDDNDTNLQDTDD 134


>gi|390352462|ref|XP_796439.3| PREDICTED: homeobox protein PKNOX2-like [Strongylocentrotus
           purpuratus]
          Length = 526

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 38/56 (67%)

Query: 68  RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
           +R    + +T  +++WL +H  +PYP++ EK M+A  T +T+ QV+ WF NARRR+
Sbjct: 340 KRGVLPKHATTVMRSWLFQHIVHPYPSEDEKRMIAAQTNLTMLQVNNWFINARRRI 395


>gi|255543785|ref|XP_002512955.1| bel1 homeotic protein, putative [Ricinus communis]
 gi|223547966|gb|EEF49458.1| bel1 homeotic protein, putative [Ricinus communis]
          Length = 677

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE--NKMTWEP 133
           S + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL K    +M  E 
Sbjct: 409 SVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEE 468

Query: 134 KNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQ 165
               + D ++   +     K D+   E++ ++
Sbjct: 469 IGDVEMDSNSSSENAARVTKGDMGTSEDREEE 500


>gi|238883362|gb|EEQ47000.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 344

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)

Query: 69  RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR----LK 124
           R N  +E T  L  WLN+H  +PYP+  EK  L I T +   Q+S WF NARRR    LK
Sbjct: 278 RNNLPKEITFILLQWLNDHLNHPYPSSFEKNQLMISTGLNQQQLSNWFINARRRKIKLLK 337

Query: 125 KENKMTW 131
           ++ ++ +
Sbjct: 338 QQQRLNF 344


>gi|410969869|ref|XP_003991414.1| PREDICTED: homeobox protein PKNOX1 [Felis catus]
          Length = 436

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)

Query: 64  DLAARRKNAT--RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 121
           D +A+ K     + +T  +++WL +H  +PYPT+ EK  +A  T +TL QV+ WF NARR
Sbjct: 256 DGSAKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARR 315

Query: 122 RL 123
           R+
Sbjct: 316 RI 317


>gi|356509553|ref|XP_003523512.1| PREDICTED: BEL1-like homeodomain protein 6-like [Glycine max]
          Length = 759

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/50 (56%), Positives = 34/50 (68%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           S + L+AWL EH  +PYP   +KIMLA  T +T +QVS WF NAR RL K
Sbjct: 402 SVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWK 451


>gi|342878928|gb|EGU80207.1| hypothetical protein FOXB_09290 [Fusarium oxysporum Fo5176]
          Length = 1592

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 34/52 (65%)

Query: 73  TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
           TRES   LK WL  H+ +PYP + E+ ML   T +T TQ+S W ANARRR K
Sbjct: 944 TRESVRILKNWLATHQNHPYPREPERRMLQEETGLTKTQISNWLANARRRGK 995


>gi|302785694|ref|XP_002974618.1| hypothetical protein SELMODRAFT_414952 [Selaginella moellendorffii]
 gi|300157513|gb|EFJ24138.1| hypothetical protein SELMODRAFT_414952 [Selaginella moellendorffii]
          Length = 1125

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 13/110 (11%)

Query: 25  VNISSTKVPALQSRRQLCGIDKQVIQVSNLTAVRYGAGYDLAARRKNATRE-STATLKAW 83
           V  S T  P L SR +   ID+Q+ Q       +YG     A R +    E S + L+AW
Sbjct: 703 VTKSITSRP-LTSRLRF--IDQQIRQ--QRAYQQYGMLQQHAWRPQRGLPERSVSILRAW 757

Query: 84  LNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
           L EH  +PYP   +K+MLA  T +T  QVS WF NAR RL       W+P
Sbjct: 758 LFEHFLHPYPKDADKMMLARQTGLTRGQVSNWFINARVRL-------WKP 800


>gi|115487458|ref|NP_001066216.1| Os12g0160500 [Oryza sativa Japonica Group]
 gi|113648723|dbj|BAF29235.1| Os12g0160500 [Oryza sativa Japonica Group]
          Length = 417

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 76  STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
           + + L+AWL EH  +PYP   +K+MLA  T +T +QVS WF NAR RL K
Sbjct: 127 AVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.315    0.129    0.377 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,043,991,128
Number of Sequences: 23463169
Number of extensions: 114702231
Number of successful extensions: 501142
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4407
Number of HSP's successfully gapped in prelim test: 1396
Number of HSP's that attempted gapping in prelim test: 496117
Number of HSP's gapped (non-prelim): 6219
length of query: 197
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 62
effective length of database: 9,191,667,552
effective search space: 569883388224
effective search space used: 569883388224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)