BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10105
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24248|ARA_DROME Homeobox protein araucan OS=Drosophila melanogaster GN=ara PE=1
SV=2
Length = 717
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 96/98 (97%), Gaps = 1/98 (1%)
Query: 59 YGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 118
YGA YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
Sbjct: 249 YGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 308
Query: 119 ARRRLKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDL 156
ARRRLKKENKMTWEPKN+TDDDDDA++SD DEKDK+DL
Sbjct: 309 ARRRLKKENKMTWEPKNRTDDDDDALVSD-DEKDKEDL 345
>sp|P54269|CAUP_DROME Homeobox protein caupolican OS=Drosophila melanogaster GN=caup PE=2
SV=2
Length = 693
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/103 (85%), Positives = 93/103 (90%), Gaps = 1/103 (0%)
Query: 54 LTAVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVS 113
L A YG YDLAARRKNATRESTATLKAWL+EHKKNPYPTKGEKIMLAIITKMTLTQVS
Sbjct: 215 LAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVS 274
Query: 114 TWFANARRRLKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDD 155
TWFANARRRLKKENKMTWEPKNKT+DDDD ++SD + EKD D
Sbjct: 275 TWFANARRRLKKENKMTWEPKNKTEDDDDGMMSDDEKEKDAGD 317
>sp|P78412|IRX6_HUMAN Iroquois-class homeodomain protein IRX-6 OS=Homo sapiens GN=IRX6
PE=2 SV=3
Length = 446
Score = 147 bits (371), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 58 RYGA-GYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
RYGA A RRKNATRE+T+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 138 RYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 197
Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDA 143
ANARRRLKKENKMTW PKNK ++ A
Sbjct: 198 ANARRRLKKENKMTWAPKNKGGEERKA 224
>sp|Q9ER75|IRX6_MOUSE Iroquois-class homeodomain protein IRX-6 OS=Mus musculus GN=Irx6
PE=2 SV=2
Length = 438
Score = 147 bits (370), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 84/112 (75%), Gaps = 11/112 (9%)
Query: 58 RYGAGYDL--AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 115
RYG G +L A RRKNATREST+ LKAWL+EH+KNPYPTKGEKIMLAIITKMTLTQVSTW
Sbjct: 135 RYG-GVELSSAGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 193
Query: 116 FANARRRLKKENKMTWEPKN------KTDDDDDAIISDCDEKDKDDLMMDEE 161
FANARRRLKKENKMTW PKN K D +D++ C D D +E
Sbjct: 194 FANARRRLKKENKMTWAPKNKGGEERKADSGEDSL--GCLNGDTKDATASQE 243
>sp|Q9JKQ4|IRX5_MOUSE Iroquois-class homeodomain protein IRX-5 OS=Mus musculus GN=Irx5
PE=2 SV=1
Length = 484
Score = 146 bits (368), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 85/100 (85%)
Query: 63 YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
Y A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 110 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 169
Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
LKKENKMTW P+N+++D+++ D ++ D+D+ E+K
Sbjct: 170 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 209
>sp|Q4LDQ3|IRX5_XENTR Iroquois-class homeodomain protein irx-5 OS=Xenopus tropicalis
GN=irx5 PE=2 SV=1
Length = 482
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 86/103 (83%)
Query: 63 YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
Y A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 107 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 166
Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQ 165
LKKENKMTW P+N+++D++D D ++ ++DD EEK Q
Sbjct: 167 LKKENKMTWTPRNRSEDEEDDENIDLEKNEEDDPRKLEEKGDQ 209
>sp|P78411|IRX5_HUMAN Iroquois-class homeodomain protein IRX-5 OS=Homo sapiens GN=IRX5
PE=1 SV=3
Length = 483
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 85/100 (85%)
Query: 63 YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
Y A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 111 YGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 170
Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEK 162
LKKENKMTW P+N+++D+++ D ++ D+D+ E+K
Sbjct: 171 LKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDK 210
>sp|Q9YGS0|IRX4_CHICK Iroquois-class homeodomain protein IRX-4 OS=Gallus gallus GN=IRX4
PE=2 SV=1
Length = 485
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/83 (83%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
Query: 58 RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
RYGA D RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGA-MDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193
Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
NARRRLKKENKMTW P+NK D+
Sbjct: 194 NARRRLKKENKMTWPPRNKCSDE 216
>sp|Q90XW6|IRX4A_XENLA Iroquois-class homeodomain protein irx-4-A OS=Xenopus laevis
GN=irx4-a PE=2 SV=1
Length = 496
Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/83 (81%), Positives = 75/83 (90%), Gaps = 1/83 (1%)
Query: 58 RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
RYG D ++RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGT-MDGSSRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193
Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
NARRRLKKENKMTW P+NK D+
Sbjct: 194 NARRRLKKENKMTWPPRNKCSDE 216
>sp|Q9QY61|IRX4_MOUSE Iroquois-class homeodomain protein IRX-4 OS=Mus musculus GN=Irx4
PE=2 SV=1
Length = 515
Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)
Query: 58 RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
RYG D RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 137 RYGT-VDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 195
Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
NARRRLKKENKMTW P+NK D+
Sbjct: 196 NARRRLKKENKMTWPPRNKCADE 218
>sp|P81067|IRX3_MOUSE Iroquois-class homeodomain protein IRX-3 OS=Mus musculus GN=Irx3
PE=1 SV=2
Length = 507
Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 65/77 (84%), Positives = 74/77 (96%)
Query: 67 ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
+R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 132 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 191
Query: 127 NKMTWEPKNKTDDDDDA 143
NKMTW P+++TD++ +A
Sbjct: 192 NKMTWAPRSRTDEEGNA 208
>sp|P78413|IRX4_HUMAN Iroquois-class homeodomain protein IRX-4 OS=Homo sapiens GN=IRX4
PE=2 SV=2
Length = 519
Score = 143 bits (361), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 1/83 (1%)
Query: 58 RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
RYG D RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 136 RYGT-MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 194
Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
NARRRLKKENKMTW P+NK D+
Sbjct: 195 NARRRLKKENKMTWPPRNKCADE 217
>sp|Q90XW5|IRX5_XENLA Iroquois-class homeodomain protein irx-5 OS=Xenopus laevis GN=irx5
PE=2 SV=1
Length = 474
Score = 143 bits (360), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 85/103 (82%)
Query: 63 YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
Y A RKNA+R++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 107 YGDPAYRKNASRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 166
Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCDEKDKDDLMMDEEKMKQ 165
LKKENKMTW P+N+++D+DD D ++ ++DD EE Q
Sbjct: 167 LKKENKMTWTPRNRSEDEDDDENIDLEKNEEDDPSKLEENGNQ 209
>sp|B7ZRT8|IRX4B_XENLA Iroquois-class homeodomain protein irx-4-B OS=Xenopus laevis
GN=irx4-b PE=2 SV=1
Length = 495
Score = 143 bits (360), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 68/83 (81%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
Query: 58 RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
RYG D + RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGT-MDGSTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193
Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
NARRRLKKENKMTW P+NK D+
Sbjct: 194 NARRRLKKENKMTWPPRNKCSDE 216
>sp|Q688D0|IRX4_XENTR Iroquois-class homeodomain protein irx-4 OS=Xenopus tropicalis
GN=irx4 PE=2 SV=1
Length = 496
Score = 143 bits (360), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 68/83 (81%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
Query: 58 RYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFA 117
RYG D + RRKNATRE+T+TLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFA
Sbjct: 135 RYGT-MDGSTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 193
Query: 118 NARRRLKKENKMTWEPKNKTDDD 140
NARRRLKKENKMTW P+NK D+
Sbjct: 194 NARRRLKKENKMTWPPRNKCSDE 216
>sp|P78415|IRX3_HUMAN Iroquois-class homeodomain protein IRX-3 OS=Homo sapiens GN=IRX3
PE=2 SV=3
Length = 501
Score = 143 bits (360), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 66/80 (82%), Positives = 75/80 (93%)
Query: 67 ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
+R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 129 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 188
Query: 127 NKMTWEPKNKTDDDDDAIIS 146
NKMTW P+++TD++ +A S
Sbjct: 189 NKMTWAPRSRTDEEGNAYGS 208
>sp|Q6NVN3|IRX3_XENTR Iroquois-class homeodomain protein irx-3 OS=Xenopus tropicalis
GN=irx3 PE=2 SV=1
Length = 448
Score = 143 bits (360), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 66/80 (82%), Positives = 75/80 (93%)
Query: 67 ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
+R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 110 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 169
Query: 127 NKMTWEPKNKTDDDDDAIIS 146
NKMTW P+++TD++ +A S
Sbjct: 170 NKMTWAPRSRTDEEGNAYGS 189
>sp|O42261|IRX3_XENLA Iroquois-class homeodomain protein irx-3 OS=Xenopus laevis GN=irx3
PE=2 SV=2
Length = 448
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/80 (82%), Positives = 75/80 (93%)
Query: 67 ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
+R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 110 SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 169
Query: 127 NKMTWEPKNKTDDDDDAIIS 146
NKMTW P+++TD++ +A S
Sbjct: 170 NKMTWAPRSRTDEEGNAYGS 189
>sp|Q6F2E3|IRX1_XENTR Iroquois-class homeodomain protein irx-1 OS=Xenopus tropicalis
GN=irx1 PE=2 SV=1
Length = 467
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 82/100 (82%), Gaps = 1/100 (1%)
Query: 63 YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
Y R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 124 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 183
Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDDLMMDEE 161
LKKENK+TW ++K DD+ ++ D EK++DD +D E
Sbjct: 184 LKKENKVTWGARSKEDDNIFGSDTEGDHEKNEDDEEIDLE 223
>sp|Q9YGK8|IRX1A_XENLA Iroquois-class homeodomain protein irx-1-A OS=Xenopus laevis
GN=irx1-a PE=2 SV=1
Length = 467
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
Query: 63 YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
Y R KNATREST TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 124 YGDPGRPKNATRESTGTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 183
Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDDLMMDEE 161
LKKENK+TW ++K DD+ ++ D EK++DD +D E
Sbjct: 184 LKKENKVTWGARSKEDDNIFGSDNEGDHEKNEDDEEIDLE 223
>sp|P81068|IRX1_MOUSE Iroquois-class homeodomain protein IRX-1 OS=Mus musculus GN=Irx1
PE=2 SV=4
Length = 480
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)
Query: 63 YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
Y R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 125 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184
Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
LKKENK+TW ++K +D SD + EK +DD +D E +
Sbjct: 185 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 228
>sp|P81066|IRX2_MOUSE Iroquois-class homeodomain protein IRX-2 OS=Mus musculus GN=Irx2
PE=2 SV=2
Length = 474
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/71 (90%), Positives = 69/71 (97%)
Query: 67 ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 117 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 176
Query: 127 NKMTWEPKNKT 137
NKMTW P+NK+
Sbjct: 177 NKMTWAPRNKS 187
>sp|Q9BZI1|IRX2_HUMAN Iroquois-class homeodomain protein IRX-2 OS=Homo sapiens GN=IRX2
PE=1 SV=2
Length = 471
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/71 (90%), Positives = 69/71 (97%)
Query: 67 ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
A RKNATR++TATLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 116 AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 175
Query: 127 NKMTWEPKNKT 137
NKMTW P+NK+
Sbjct: 176 NKMTWAPRNKS 186
>sp|Q2TAQ8|IRX1B_XENLA Iroquois-class homeodomain protein irx-1-B OS=Xenopus laevis
GN=irx1-b PE=2 SV=1
Length = 462
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 102/166 (61%), Gaps = 19/166 (11%)
Query: 3 YTSPETKTLRP---ELQLFTQVPIQVNISSTKVPALQSRRQLCGIDKQVIQVSNLTAVRY 59
Y+SP P +L LF+Q+ Q + + G+ ++ T Y
Sbjct: 65 YSSPNYSAFLPYTTDLTLFSQMGSQYEL-----------KDNPGVHPATF-AAHTTPGYY 112
Query: 60 GAG---YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWF 116
G Y R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWF
Sbjct: 113 PYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWF 172
Query: 117 ANARRRLKKENKMTWEPKNKTDDDDDAIISDCD-EKDKDDLMMDEE 161
ANARRRLKKENK+TW K DD+ ++ D EK++DD +D E
Sbjct: 173 ANARRRLKKENKVTWGAMGKEDDNIFGSDNEGDHEKNEDDEEIDLE 218
>sp|P78414|IRX1_HUMAN Iroquois-class homeodomain protein IRX-1 OS=Homo sapiens GN=IRX1
PE=1 SV=3
Length = 480
Score = 140 bits (354), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)
Query: 63 YDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
Y R KNATREST+TLKAWLNEH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR
Sbjct: 125 YGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184
Query: 123 LKKENKMTWEPKNKTDDDDDAIISDCD---EKDKDDLMMDEEKM 163
LKKENK+TW ++K +D SD + EK +DD +D E +
Sbjct: 185 LKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESI 228
>sp|Q66IK1|IRX2_XENTR Iroquois-class homeodomain protein irx-2 OS=Xenopus tropicalis
GN=irx2 PE=2 SV=1
Length = 456
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 77/102 (75%), Gaps = 13/102 (12%)
Query: 67 ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 112 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 171
Query: 127 NKMTWEPKNKTD-------------DDDDAIISDCDEKDKDD 155
NKMTW P+NK++ ++ DC+E +D
Sbjct: 172 NKMTWAPRNKSEDEDDDEGDGERVKEEQSEKAQDCNETSAED 213
>sp|Q6DCQ1|IRX2_XENLA Iroquois-class homeodomain protein irx-2 OS=Xenopus laevis GN=irx2
PE=2 SV=1
Length = 455
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 68/71 (95%)
Query: 67 ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
A RKNATR++TATLKAWL EH+KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
Sbjct: 112 AYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 171
Query: 127 NKMTWEPKNKT 137
NKMTW P+NK+
Sbjct: 172 NKMTWAPRNKS 182
>sp|Q93348|IRX_CAEEL Putative iroquois-class homeodomain protein irx-1 OS=Caenorhabditis
elegans GN=irx-1 PE=3 SV=3
Length = 377
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
Query: 32 VPALQSRRQLCGIDKQVIQVSNLTAVRYGAGYDL-AARRKNATRESTATLKAWLNEHKKN 90
+PA L G + + A R Y L +++NATRE+TA LK WL+ H+KN
Sbjct: 81 IPADLKPEMLLGGGPGPMPMFFSDAHRLYHPYGLDGIKKRNATREATAPLKDWLHSHRKN 140
Query: 91 PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDD 139
PYP+K +K+MLA+ T MTLTQVSTWFANARRRLKKENKMTW P+N+ D
Sbjct: 141 PYPSKADKVMLAVGTGMTLTQVSTWFANARRRLKKENKMTWSPQNRRGD 189
>sp|Q8BIA3|MKX_MOUSE Homeobox protein Mohawk OS=Mus musculus GN=Mkx PE=2 SV=1
Length = 353
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 17/121 (14%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
++ A ++ LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK +
Sbjct: 74 KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133
Query: 126 ENKMTWEPKNK--------------TDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVK 171
+ ++W + K D D+ D + ++ + + HH ++K
Sbjct: 134 QPDLSWALRIKLYNKYVQGNAERLSVSSDGDSCSEDGENPPRNHMNEEGYSTPAHHTVIK 193
Query: 172 G 172
G
Sbjct: 194 G 194
>sp|Q8IYA7|MKX_HUMAN Homeobox protein Mohawk OS=Homo sapiens GN=MKX PE=2 SV=2
Length = 352
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
++ A ++ LK WL +H+ NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK +
Sbjct: 74 KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVR 133
Query: 126 ENKMTW 131
+ ++W
Sbjct: 134 QPDLSW 139
>sp|Q5R6P2|MKX_PONAB Homeobox protein Mohawk OS=Pongo abelii GN=MKX PE=2 SV=1
Length = 352
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK---K 125
++ A ++ LK WL +H+ NPYPTK EKI+LA+ +MTL QVS WFANARRRLK +
Sbjct: 74 KRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGPQMTLVQVSNWFANARRRLKNTVR 133
Query: 126 ENKMTW 131
+ ++W
Sbjct: 134 QPDLSW 139
>sp|Q90655|AKR_CHICK Homeobox protein AKR OS=Gallus gallus PE=2 SV=1
Length = 269
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 61 AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
AG RR N +ES L+ WL EH+ N YP++ EK++L+ T ++ QV WF NAR
Sbjct: 31 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKVLLSRQTHLSTLQVCNWFINAR 90
Query: 121 RRL 123
RRL
Sbjct: 91 RRL 93
>sp|Q9FXG8|BLH10_ARATH BEL1-like homeodomain protein 10 OS=Arabidopsis thaliana GN=BLH10
PE=1 SV=1
Length = 538
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 13/82 (15%)
Query: 76 STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP-- 133
S + L+AWL EH +PYP + EKIMLA T ++ QV+ WF NAR RL W+P
Sbjct: 362 SVSVLRAWLFEHFLHPYPKESEKIMLAKQTGLSKNQVANWFINARVRL-------WKPMI 414
Query: 134 ----KNKTDDDDDAIISDCDEK 151
K + D+ + +IS ++
Sbjct: 415 EEMYKEEFGDESELLISKSSQE 436
>sp|P70284|TGIF1_MOUSE Homeobox protein TGIF1 OS=Mus musculus GN=Tgif1 PE=2 SV=2
Length = 272
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
RR N +ES L+ WL EH+ N YP++ EK +L+ T ++ QV WF NARRRL
Sbjct: 38 RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93
>sp|Q5IS58|TGIF1_PANTR Homeobox protein TGIF1 OS=Pan troglodytes GN=TGIF1 PE=2 SV=1
Length = 401
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 61 AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
AG RR N +ES L+ WL EH+ N YP++ EK +L+ T ++ QV WF NAR
Sbjct: 160 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 219
Query: 121 RRL 123
RRL
Sbjct: 220 RRL 222
>sp|Q15583|TGIF1_HUMAN Homeobox protein TGIF1 OS=Homo sapiens GN=TGIF1 PE=1 SV=3
Length = 401
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 61 AGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
AG RR N +ES L+ WL EH+ N YP++ EK +L+ T ++ QV WF NAR
Sbjct: 160 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 219
Query: 121 RRL 123
RRL
Sbjct: 220 RRL 222
>sp|Q8SRR1|HD12_ENCCU Homeobox protein HD-12 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=HD-12 PE=3 SV=1
Length = 193
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 66 AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
RR N +E + L+ WL +H PYP+K EK ML+ T + L+Q+ WFANARRR+
Sbjct: 124 VIRRINFPKEISKILRKWLKKHLTYPYPSKIEKKMLSKETGLKLSQIDNWFANARRRI 181
>sp|Q54VB4|HBX9_DICDI Homeobox protein 9 OS=Dictyostelium discoideum GN=hbx9 PE=3 SV=1
Length = 639
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
+R E+T+ LK WL EH +PYPT+ EK+ LA T ++ Q++ WF NARRR+
Sbjct: 562 KRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTFLSFNQINNWFTNARRRI 617
>sp|Q9GZN2|TGIF2_HUMAN Homeobox protein TGIF2 OS=Homo sapiens GN=TGIF2 PE=1 SV=1
Length = 237
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
RR N +ES L+ WL H+ N YP++ EK+ L+ T +++ Q+ WF NARRRL
Sbjct: 21 RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76
>sp|P41817|CUP9_YEAST Homeobox protein CUP9 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CUP9 PE=1 SV=1
Length = 306
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 66 AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
+ RR N +E+ L WL H NPYPT+ EK L I T +T Q+S WF N RRR
Sbjct: 163 SGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 219
>sp|Q8C0Y1|TGIF2_MOUSE Homeobox protein TGIF2 OS=Mus musculus GN=Tgif2 PE=2 SV=1
Length = 237
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
RR N +ES L+ WL H+ N YP++ EK+ L+ T +++ Q+ WF NARRRL
Sbjct: 21 RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76
>sp|Q9FWS9|BLH3_ARATH BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana GN=BLH3
PE=1 SV=1
Length = 524
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 76 STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 133
S + L+AWL EH +PYP + EKIML+ T ++ QV+ WF NAR RL W+P
Sbjct: 357 SVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQVANWFINARVRL-------WKP 407
>sp|Q1PFD1|BLH11_ARATH BEL1-like homeodomain protein 11 OS=Arabidopsis thaliana GN=BLH11
PE=2 SV=1
Length = 290
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 76 STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
S A L+AWL +H +PYP + EK++LA T ++ QVS WF NAR RL K
Sbjct: 213 SVAILRAWLFQHFLHPYPNEAEKLVLASQTGLSKNQVSNWFINARVRLWK 262
>sp|P55347|PKNX1_HUMAN Homeobox protein PKNOX1 OS=Homo sapiens GN=PKNOX1 PE=1 SV=3
Length = 436
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
+R + +T +++WL +H +PYPT+ EK +A T +TL QV+ WF NARRR+
Sbjct: 262 KRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317
>sp|O70477|PKNX1_MOUSE Homeobox protein PKNOX1 OS=Mus musculus GN=Pknox1 PE=2 SV=3
Length = 436
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
+R + +T +++WL +H +PYPT+ EK +A T +TL QV+ WF NARRR+
Sbjct: 262 KRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317
>sp|Q2HJ84|PKNX1_BOVIN Homeobox protein PKNOX1 OS=Bos taurus GN=PKNOX1 PE=2 SV=1
Length = 436
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
+R + +T +++WL +H +PYPT+ EK +A T +TL QV+ WF NARRR+
Sbjct: 262 KRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317
>sp|Q5R6L1|PKNX2_PONAB Homeobox protein PKNOX2 OS=Pongo abelii GN=PKNOX2 PE=2 SV=1
Length = 472
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
+R + +T +++WL +H +PYPT+ EK +A T +TL QV+ WF NARRR+
Sbjct: 291 KRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFVNARRRI 346
>sp|Q96KN3|PKNX2_HUMAN Homeobox protein PKNOX2 OS=Homo sapiens GN=PKNOX2 PE=1 SV=2
Length = 472
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
+R + +T +++WL +H +PYPT+ EK +A T +TL QV+ WF NARRR+
Sbjct: 291 KRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRI 346
>sp|Q8BG99|PKNX2_MOUSE Homeobox protein PKNOX2 OS=Mus musculus GN=Pknox2 PE=2 SV=1
Length = 474
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 123
+R + +T +++WL +H +PYPT+ EK +A T +TL QV+ WF NARRR+
Sbjct: 291 KRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRI 346
>sp|P53147|TOS8_YEAST Homeobox protein TOS8 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TOS8 PE=3 SV=1
Length = 276
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 67 ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
+R N + + + L WL+EH NPYPT EK L T +T Q+S WF NARRR
Sbjct: 196 GKRSNLPKATVSILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINARRR 251
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,275,042
Number of Sequences: 539616
Number of extensions: 2752784
Number of successful extensions: 13315
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 12454
Number of HSP's gapped (non-prelim): 958
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)