RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10105
(197 letters)
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 62
Score = 73.6 bits (181), Expect = 2e-18
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
+R + +T +++WL +H +PYPT+ EK +A T +TL QV+ WF NARRR+ +
Sbjct: 5 KRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQ 62
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 60
Score = 68.7 bits (168), Expect = 1e-16
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
R T+E+ L++W ++ +NPY L T ++ Q+ W +N RR+ K
Sbjct: 1 RGHRFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKT 58
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 73
Score = 65.0 bits (158), Expect = 4e-15
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
+R+N +++T L + H NPYP++ K LA +T++QVS WF N R R KK
Sbjct: 4 KRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNI 63
Query: 128 KMTWEPKN 135
E N
Sbjct: 64 GKFQEEAN 71
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 51.2 bits (122), Expect = 7e-10
Identities = 13/63 (20%), Positives = 25/63 (39%)
Query: 65 LAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
+ AR++ T + K P P+ + +A + V WF N R++ K
Sbjct: 5 VQARKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDVVRVWFCNRRQKGK 64
Query: 125 KEN 127
+ +
Sbjct: 65 RSS 67
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 65
Score = 50.3 bits (120), Expect = 1e-09
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
+R++ T S + L ++ YP + LA T +T ++ WF N R RL+K++
Sbjct: 2 QRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQH 61
Query: 128 K 128
Sbjct: 62 T 62
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 77
Score = 50.6 bits (121), Expect = 1e-09
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 67 ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
+ RK + E N Y T+ + +A + +T QV WF N R ++KK
Sbjct: 12 STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKI 71
Query: 127 NK 128
NK
Sbjct: 72 NK 73
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 88
Score = 50.0 bits (119), Expect = 3e-09
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
T +T L E N Y ++ ++ +A ++ TQV WF N R + KK
Sbjct: 27 PSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRE 86
Query: 128 K 128
+
Sbjct: 87 R 87
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 47.4 bits (112), Expect = 2e-08
Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
R + E+ L++++++ YP + L+ + + +F N R +K
Sbjct: 10 SRTKISLEALGILQSFIHDV--GLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHSG 67
Query: 128 K 128
Sbjct: 68 P 68
>d1ftta_ a.4.1.1 (A:) Thyroid transcription factor 1 homeodomain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 68
Score = 46.1 bits (109), Expect = 5e-08
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
RRK S A + K+ Y + E+ LA + +T TQV WF N R ++K++
Sbjct: 2 RRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQA 61
Query: 128 K 128
K
Sbjct: 62 K 62
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 60
Score = 45.7 bits (108), Expect = 6e-08
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
R+ T ++ L+ ++N YP + +A+ T +T +V WF N R + +K
Sbjct: 2 RRQRTHFTSQQLQQLEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKR 59
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 66
Score = 45.6 bits (108), Expect = 8e-08
Identities = 15/62 (24%), Positives = 24/62 (38%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
+ T + L + NP P K L +T ++ + WF N R + KK +
Sbjct: 3 TTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRS 62
Query: 128 KM 129
M
Sbjct: 63 IM 64
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 77
Score = 45.4 bits (107), Expect = 1e-07
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
+RK + A ++ Y + E+ LA + ++T TQV WF N R + K+
Sbjct: 9 KRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQ 68
Query: 128 K 128
Sbjct: 69 N 69
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 67
Score = 44.9 bits (106), Expect = 1e-07
Identities = 14/60 (23%), Positives = 24/60 (40%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 128
R+ T +++ + + Y T L+ + QV WF N RRR K ++
Sbjct: 2 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSD 61
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 53
Score = 44.9 bits (106), Expect = 1e-07
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
+ + + ++ A L+ ++ EK +A +T QV WF N R R K
Sbjct: 1 KSSISPQARAFLEQVF---RRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 53
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez
{Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 45.1 bits (106), Expect = 1e-07
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 67 ARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
+ K T+E A LK++ + + + + L IT + ++ WF + R LK
Sbjct: 5 SSGKRKTKEQLAILKSF---FLQCQWARREDYQKLEQITGLPRPEIIQWFGDTRYALKH- 60
Query: 127 NKMTWEPKNKT 137
++ W N +
Sbjct: 61 GQLKWFRDNAS 71
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 52
Score = 44.3 bits (105), Expect = 2e-07
Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Query: 73 TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
T + A L+ +P + L+ + + WF R + K
Sbjct: 1 TAQPNAILEKVFTAI--TKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKP 51
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1,
ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 44.7 bits (105), Expect = 2e-07
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
+ K T E L+A + T E L TK+T ++ WF ++ +
Sbjct: 7 KFKEKTAEQLRVLQASF---LNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKALKE 63
Query: 128 K 128
+
Sbjct: 64 E 64
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 68
Score = 44.4 bits (105), Expect = 2e-07
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK 128
++N T + ++A E ++ YP + LA + ++ WF+N R + ++E K
Sbjct: 2 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEK 61
Query: 129 M 129
+
Sbjct: 62 L 62
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila
melanogaster [TaxId: 7227]}
Length = 56
Score = 44.0 bits (104), Expect = 2e-07
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
R+ TR T L+ E N Y T+ +I +A +T Q+ WF N R + KKEN
Sbjct: 1 RQTYTRYQTLELE---KEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKEN 56
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens)
[TaxId: 9606]}
Length = 57
Score = 42.9 bits (101), Expect = 6e-07
Identities = 13/57 (22%), Positives = 25/57 (43%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
+ R S + + Y + E+ LA + +++ QV TWF N R + ++
Sbjct: 1 KGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 57
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 58
Score = 41.8 bits (98), Expect = 2e-06
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
RK S L+ E+ N + TK ++ ++ T ++ Q++ WF N R + KK
Sbjct: 2 RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKK 58
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 80
Score = 40.8 bits (95), Expect = 6e-06
Identities = 6/55 (10%), Positives = 12/55 (21%), Gaps = 1/55 (1%)
Query: 73 TRESTATLKAWLNE-HKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
T E + A+ + T + + W N +
Sbjct: 25 TAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSGPSS 79
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 50
Score = 39.8 bits (93), Expect = 7e-06
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 120
R T TL A K+N P+K +I ++ + L+ VS +F NAR
Sbjct: 2 RLVFTDVQRRTLHA---IFKENKRPSKELQITISQQLGLELSTVSNFFMNAR 50
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 57
Score = 39.9 bits (93), Expect = 7e-06
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 126
R TR+ L+ E K Y ++ + LA + + + WF N R + K++
Sbjct: 2 YRTAFTRDQLGRLE---KEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQ 57
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 59
Score = 39.7 bits (93), Expect = 9e-06
Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
E TL+ YP + L+ ++ ++ WF + R + K
Sbjct: 4 DSPVNKVEPNDTLEKVFVSV--TKYPDEKRLKGLSKQLDWSVRKIQCWFRHRRNQDK 58
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 58
Score = 39.1 bits (91), Expect = 1e-05
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
RK T +TA L A + ++ Y + E+ + +T TQV WF N R + K+
Sbjct: 1 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 57
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 57
Score = 38.8 bits (90), Expect = 2e-05
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 68 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 127
+R + L+ E+ PT + ++A M + WF+N R++ K+ N
Sbjct: 1 KRTSIETNIRVALEKSFMEN---QKPTSEDITLIAEQLNMEKEVIRVWFSNRRQKEKRIN 57
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1
(Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 38.1 bits (88), Expect = 6e-05
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 15/76 (19%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLA---------------IITKMTLTQVS 113
R + L + +N YP + ++ +A + ++T +V
Sbjct: 1 RGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVY 60
Query: 114 TWFANARRRLKKENKM 129
WFAN R+ +K+ +
Sbjct: 61 NWFANRRKEIKRRANI 76
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 58
Score = 37.2 bits (86), Expect = 7e-05
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 70 KNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 125
K T S A A ++ P+ E + +A + V WF N R+R K+
Sbjct: 1 KRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKR 56
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster
[TaxId: 7227]}
Length = 53
Score = 36.8 bits (85), Expect = 9e-05
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 122
R + E A LK E +N Y T+ + L+ + Q+ WF NAR +
Sbjct: 3 RTAFSSEQLARLK---REFNENRYLTERRRQQLSSELGLNEAQIKIWFQNARAK 53
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 72
Score = 36.5 bits (84), Expect = 2e-04
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Query: 67 ARRKNA--TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 124
A T + L+ +K N +P ++A +T Q WF +
Sbjct: 1 GSEGAATMTEDQVEILEYNF--NKVNKHPDPTTLCLIAAEAGLTEEQTQKWFKQRLAEWR 58
Query: 125 KENKMTWEPKNKTD 138
+ + E ++ TD
Sbjct: 59 RSEGLPSECRSVTD 72
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1) {Rat
(Rattus rattus) [TaxId: 10117]}
Length = 78
Score = 31.3 bits (70), Expect = 0.014
Identities = 15/81 (18%), Positives = 23/81 (28%), Gaps = 24/81 (29%)
Query: 69 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIIT---------------------KM 107
R S L ++ P+K E+ L +
Sbjct: 1 RFKWGPASQQILFQAY---ERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLV 57
Query: 108 TLTQVSTWFANARRRLKKENK 128
T +V WFAN R+ +K
Sbjct: 58 TEVRVYNWFANRRKEEAFRHK 78
>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 29.4 bits (65), Expect = 0.097
Identities = 7/44 (15%), Positives = 14/44 (31%)
Query: 152 DKDDLMMDEEKMKQHHRMVKGHFPHMYVTKYETLPPTNLQGLTP 195
K D M + + + + KG ++ Y + P
Sbjct: 46 KKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYNPRRSHSDASSGP 89
>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 26.2 bits (57), Expect = 1.1
Identities = 5/21 (23%), Positives = 13/21 (61%)
Query: 155 DLMMDEEKMKQHHRMVKGHFP 175
D++ D + + H+ ++G+ P
Sbjct: 16 DIIEDADGIAMPHQWLEGNLP 36
>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 26.0 bits (57), Expect = 1.1
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 152 DKDDLMMDEEKMKQHHRMVKGHFPHMYVTKYETLP 186
+ D+ + E KG+ P Y+ K E+ P
Sbjct: 42 EFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTESGP 76
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain
{Soybean (Glycine max), isozyme L1 [TaxId: 3847]}
Length = 690
Score = 26.8 bits (59), Expect = 2.1
Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 23/177 (12%)
Query: 33 PALQSRRQLCGIDKQVIQVSNL--TAVRYGAGYDLA--------ARRKNATRESTATLKA 82
P LQ+ L + +I +++ AV +G Y A R+ + T +
Sbjct: 518 PKLQTLEDLVEVCLIIIWIASALHAAVNFGQ-YPYGGLIMNRPTASRRLLPEKGTPEYEE 576
Query: 83 WLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDD 142
+N H+K T K+ I +++ ++ + A+ L + + W D
Sbjct: 577 MINNHEKAYLRTITSKLPTLIS--LSVIEILSTHASDEVYLGQRDNPHWT--------SD 626
Query: 143 AIISDCDEKDKDDLMMDEEKMKQ--HHRMVKGHFPHMYVTKYETLPPTNLQGLTPKG 197
+ +K + L EEK+ + + ++G+ Y L P++ +GLT +G
Sbjct: 627 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRG 683
>d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4,
KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 433
Score = 25.8 bits (56), Expect = 3.8
Identities = 3/26 (11%), Positives = 10/26 (38%), Gaps = 2/26 (7%)
Query: 119 ARRRLKKENKMTWEPK--NKTDDDDD 142
R+ ++ ++W+ + D
Sbjct: 344 ELRKEEEAKGISWQRRWFKDFDYSVT 369
>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha
subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 83
Score = 24.3 bits (52), Expect = 5.0
Identities = 6/53 (11%), Positives = 13/53 (24%), Gaps = 3/53 (5%)
Query: 136 KTDDDDDAIISDCDEKDKDDLMMDEEKMKQHHRMVKGHFPHMYVTKYETLPPT 188
K + + ++ + +G FP YV +
Sbjct: 32 KGSLVALGFSDGQEARPEEIGWL---NGYNETTGERGDFPGTYVEYIGRKKIS 81
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.129 0.377
Gapped
Lambda K H
0.267 0.0654 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 705,247
Number of extensions: 30503
Number of successful extensions: 121
Number of sequences better than 10.0: 1
Number of HSP's gapped: 118
Number of HSP's successfully gapped: 41
Length of query: 197
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 116
Effective length of database: 1,295,466
Effective search space: 150274056
Effective search space used: 150274056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.2 bits)