Query psy10113
Match_columns 596
No_of_seqs 290 out of 1727
Neff 8.2
Searched_HMMs 46136
Date Fri Aug 16 18:15:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10113.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10113hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2584|consensus 100.0 3E-131 7E-136 985.9 34.6 514 13-550 8-522 (522)
2 PLN02942 dihydropyrimidinase 100.0 3.9E-68 8.5E-73 581.5 48.2 457 18-483 4-461 (486)
3 PRK13404 dihydropyrimidinase; 100.0 6.9E-66 1.5E-70 561.6 47.9 454 18-482 3-463 (477)
4 COG0044 PyrC Dihydroorotase an 100.0 2.6E-66 5.7E-71 550.1 42.9 428 19-471 1-428 (430)
5 TIGR02033 D-hydantoinase D-hyd 100.0 3.2E-65 7E-70 557.1 48.1 453 21-480 1-454 (454)
6 PRK08323 phenylhydantoinase; V 100.0 2.4E-64 5.3E-69 550.7 47.9 453 19-483 1-455 (459)
7 cd01314 D-HYD D-hydantoinases 100.0 2.6E-64 5.7E-69 548.5 46.6 447 21-475 1-447 (447)
8 PLN02795 allantoinase 100.0 7.2E-63 1.6E-67 540.1 47.3 445 19-481 44-505 (505)
9 PRK08044 allantoinase; Provisi 100.0 2.3E-62 4.9E-67 530.6 45.3 439 19-479 3-449 (449)
10 PRK06189 allantoinase; Provisi 100.0 6.1E-62 1.3E-66 528.9 47.2 443 18-481 2-448 (451)
11 PRK07369 dihydroorotase; Provi 100.0 5.5E-62 1.2E-66 521.7 37.8 414 18-457 1-418 (418)
12 TIGR03178 allantoinase allanto 100.0 6.6E-60 1.4E-64 512.4 45.9 438 20-478 1-442 (443)
13 PRK07627 dihydroorotase; Provi 100.0 1.1E-60 2.5E-65 513.0 38.5 421 19-465 1-424 (425)
14 cd01315 L-HYD_ALN L-Hydantoina 100.0 2.2E-59 4.7E-64 509.9 47.0 443 20-479 1-447 (447)
15 PRK09060 dihydroorotase; Valid 100.0 1.4E-58 3E-63 500.7 47.0 436 18-483 4-441 (444)
16 PRK09059 dihydroorotase; Valid 100.0 2.5E-59 5.3E-64 503.3 37.8 420 19-464 3-428 (429)
17 PRK07575 dihydroorotase; Provi 100.0 2.4E-58 5.1E-63 498.4 44.6 431 18-479 2-435 (438)
18 PRK09236 dihydroorotase; Revie 100.0 3.6E-58 7.8E-63 498.4 45.6 437 19-480 2-442 (444)
19 PRK02382 dihydroorotase; Provi 100.0 3.2E-58 7E-63 498.7 44.3 435 19-483 2-438 (443)
20 PRK01211 dihydroorotase; Provi 100.0 8.9E-59 1.9E-63 493.6 37.9 404 23-481 3-406 (409)
21 PRK08417 dihydroorotase; Provi 100.0 2.1E-56 4.6E-61 475.5 36.6 384 39-464 1-386 (386)
22 PRK09357 pyrC dihydroorotase; 100.0 5.9E-56 1.3E-60 479.5 40.1 421 19-465 1-423 (423)
23 TIGR00857 pyrC_multi dihydroor 100.0 3.1E-55 6.7E-60 470.9 39.8 408 34-465 3-411 (411)
24 PRK04250 dihydroorotase; Provi 100.0 2.7E-54 6E-59 459.4 39.5 394 25-478 3-398 (398)
25 PRK00369 pyrC dihydroorotase; 100.0 9.4E-54 2E-58 452.8 38.0 389 19-481 1-390 (392)
26 cd01318 DHOase_IIb Dihydroorot 100.0 6.5E-51 1.4E-55 428.8 33.3 360 66-459 1-361 (361)
27 cd01317 DHOase_IIa Dihydroorot 100.0 1.9E-50 4.1E-55 429.0 31.1 372 59-455 2-374 (374)
28 cd01302 Cyclic_amidohydrolases 100.0 8.2E-50 1.8E-54 417.7 31.3 335 67-455 1-337 (337)
29 cd01316 CAD_DHOase The eukaryo 100.0 2.8E-47 6E-52 397.1 34.4 342 67-475 2-344 (344)
30 PRK09061 D-glutamate deacylase 100.0 1E-43 2.2E-48 389.5 36.5 400 18-481 18-507 (509)
31 cd01297 D-aminoacylase D-amino 100.0 1E-43 2.2E-48 382.4 32.5 357 20-470 1-410 (415)
32 PRK15446 phosphonate metabolis 100.0 6.1E-40 1.3E-44 348.2 31.1 362 18-466 1-383 (383)
33 cd01294 DHOase Dihydroorotase 100.0 4.1E-37 8.8E-42 322.1 23.1 323 69-447 2-331 (335)
34 cd01298 ATZ_TRZ_like TRZ/ATZ f 100.0 9.3E-36 2E-40 320.8 33.8 370 21-468 1-410 (411)
35 TIGR02318 phosphono_phnM phosp 100.0 6.5E-36 1.4E-40 316.4 31.0 357 22-463 1-376 (376)
36 PRK07228 N-ethylammeline chlor 100.0 2.2E-35 4.7E-40 321.2 34.5 378 19-470 1-420 (445)
37 PRK06687 chlorohydrolase; Vali 100.0 1.6E-34 3.6E-39 311.8 35.1 373 21-471 2-417 (419)
38 PRK15493 5-methylthioadenosine 100.0 1.7E-33 3.6E-38 304.6 34.8 378 19-472 1-418 (435)
39 PRK12394 putative metallo-depe 100.0 4.3E-33 9.3E-38 296.6 32.6 350 18-466 2-377 (379)
40 PRK10657 isoaspartyl dipeptida 100.0 5E-33 1.1E-37 297.5 31.5 364 19-470 1-383 (388)
41 TIGR00856 pyrC_dimer dihydroor 100.0 1.7E-33 3.7E-38 293.4 25.8 328 68-452 2-340 (341)
42 PRK06380 metal-dependent hydro 100.0 8.8E-32 1.9E-36 290.6 36.3 371 19-472 1-408 (418)
43 PRK08203 hydroxydechloroatrazi 100.0 4.9E-32 1.1E-36 295.2 34.3 373 21-470 4-430 (451)
44 cd00375 Urease_alpha Urease al 100.0 6.4E-33 1.4E-37 296.9 26.4 362 18-470 64-464 (567)
45 PRK09045 N-ethylammeline chlor 100.0 7.3E-32 1.6E-36 293.1 34.5 372 17-471 5-422 (443)
46 PRK13309 ureC urease subunit a 100.0 2.9E-32 6.3E-37 294.9 30.0 359 18-471 67-469 (572)
47 PRK13206 ureC urease subunit a 100.0 2.9E-32 6.2E-37 293.4 29.0 363 18-470 70-469 (573)
48 cd01308 Isoaspartyl-dipeptidas 100.0 5.6E-32 1.2E-36 289.2 29.6 362 21-470 2-382 (387)
49 PRK13308 ureC urease subunit a 100.0 3.9E-32 8.4E-37 291.0 28.2 350 18-465 67-459 (569)
50 PRK05451 dihydroorotase; Provi 100.0 1.5E-32 3.4E-37 287.6 24.2 325 68-452 5-343 (345)
51 PRK06151 N-ethylammeline chlor 100.0 1.9E-31 4.2E-36 292.6 33.4 375 19-472 1-446 (488)
52 PRK13985 ureB urease subunit b 100.0 2E-32 4.3E-37 292.0 24.6 350 18-465 64-458 (568)
53 PRK08204 hypothetical protein; 100.0 5.1E-31 1.1E-35 287.3 36.1 371 19-472 2-425 (449)
54 PRK13207 ureC urease subunit a 100.0 1.2E-31 2.7E-36 289.3 30.4 364 18-471 66-465 (568)
55 PRK07203 putative chlorohydrol 100.0 6.9E-31 1.5E-35 285.4 35.7 373 21-472 2-423 (442)
56 PRK08393 N-ethylammeline chlor 100.0 1.1E-30 2.3E-35 282.3 35.9 372 19-470 1-406 (424)
57 TIGR01975 isoAsp_dipep isoaspa 100.0 2.7E-30 5.9E-35 273.3 35.3 360 21-470 2-384 (389)
58 PRK12393 amidohydrolase; Provi 100.0 7.1E-30 1.5E-34 278.1 34.5 379 19-471 2-436 (457)
59 TIGR01792 urease_alph urease, 100.0 7.4E-31 1.6E-35 283.7 26.1 360 18-470 65-463 (567)
60 TIGR03314 Se_ssnA putative sel 100.0 1.4E-29 3E-34 274.5 34.1 375 21-471 1-421 (441)
61 PRK07583 cytosine deaminase-li 100.0 6.9E-30 1.5E-34 276.8 30.3 363 17-466 9-425 (438)
62 PRK06038 N-ethylammeline chlor 100.0 4.6E-29 1E-33 269.9 36.1 371 19-471 2-408 (430)
63 TIGR01178 ade adenine deaminas 100.0 1.7E-29 3.6E-34 277.8 32.8 325 20-469 1-342 (552)
64 PRK11170 nagA N-acetylglucosam 100.0 3.6E-30 7.9E-35 272.2 25.0 362 21-464 2-381 (382)
65 PRK09228 guanine deaminase; Pr 100.0 5.3E-29 1.2E-33 269.2 33.7 361 36-465 31-432 (433)
66 TIGR00221 nagA N-acetylglucosa 100.0 1.2E-29 2.7E-34 267.5 27.4 350 19-424 3-369 (380)
67 PRK05985 cytosine deaminase; P 100.0 3.7E-29 8.1E-34 267.7 31.4 351 18-466 1-391 (391)
68 cd01293 Bact_CD Bacterial cyto 100.0 2.9E-29 6.3E-34 269.1 30.4 355 22-462 1-398 (398)
69 TIGR02967 guan_deamin guanine 100.0 2.7E-29 5.7E-34 269.8 29.1 355 36-459 6-401 (401)
70 PRK09356 imidazolonepropionase 100.0 1.1E-28 2.3E-33 265.7 33.3 346 18-464 2-406 (406)
71 COG1820 NagA N-acetylglucosami 100.0 7.6E-30 1.6E-34 260.2 22.4 363 21-464 2-380 (380)
72 PLN02303 urease 100.0 1.2E-29 2.7E-34 279.7 24.0 360 18-470 333-733 (837)
73 COG1228 HutI Imidazolonepropio 100.0 3.3E-29 7.1E-34 265.4 24.4 346 18-467 9-405 (406)
74 COG1574 Predicted metal-depend 100.0 4.6E-29 1E-33 269.9 24.4 368 18-465 4-534 (535)
75 PRK07572 cytosine deaminase; V 100.0 6.3E-28 1.4E-32 260.7 32.9 362 19-466 2-404 (426)
76 PRK09237 dihydroorotase; Provi 100.0 3.2E-28 7E-33 259.5 29.5 345 21-466 1-371 (380)
77 PRK09230 cytosine deaminase; P 100.0 2.1E-27 4.5E-32 256.0 33.9 360 19-465 4-407 (426)
78 cd01303 GDEase Guanine deamina 100.0 2.3E-27 5E-32 256.5 31.7 355 36-459 26-429 (429)
79 TIGR02022 hutF formiminoglutam 100.0 9.3E-28 2E-32 261.2 27.5 366 22-472 5-440 (455)
80 PRK07213 chlorohydrolase; Prov 100.0 4.6E-27 1E-31 249.8 32.2 338 21-461 2-375 (375)
81 PRK09229 N-formimino-L-glutama 100.0 2.5E-27 5.5E-32 258.3 28.8 365 20-469 4-437 (456)
82 cd00854 NagA N-acetylglucosami 100.0 8.8E-28 1.9E-32 255.0 24.1 334 21-424 1-364 (374)
83 PRK10027 cryptic adenine deami 100.0 1.4E-26 3E-31 254.9 33.5 330 18-469 29-370 (588)
84 COG0402 SsnA Cytosine deaminas 100.0 3.3E-27 7.1E-32 254.8 28.0 376 19-469 2-414 (421)
85 PLN02599 dihydroorotase 100.0 1.2E-27 2.6E-32 250.0 21.6 294 68-410 23-329 (364)
86 PRK08418 chlorohydrolase; Prov 100.0 6.3E-27 1.4E-31 251.0 27.3 362 21-462 2-407 (408)
87 PRK14085 imidazolonepropionase 100.0 4E-26 8.6E-31 243.5 32.8 317 19-426 1-365 (382)
88 cd01313 Met_dep_hydrolase_E Me 100.0 2.1E-26 4.5E-31 248.2 29.7 348 31-460 4-418 (418)
89 TIGR01224 hutI imidazoloneprop 100.0 3.4E-26 7.3E-31 243.8 30.1 325 35-461 2-377 (377)
90 cd01296 Imidazolone-5PH Imidaz 100.0 1.1E-26 2.5E-31 246.9 25.7 318 39-459 1-371 (371)
91 cd01304 FMDH_A Formylmethanofu 100.0 1.7E-25 3.7E-30 239.6 32.7 400 23-482 1-514 (541)
92 TIGR03583 EF_0837 probable ami 99.9 7E-25 1.5E-29 232.6 33.0 336 19-462 1-364 (365)
93 TIGR03121 one_C_dehyd_A formyl 99.9 9E-26 2E-30 242.9 26.3 404 21-483 2-517 (556)
94 cd01299 Met_dep_hydrolase_A Me 99.9 5.2E-26 1.1E-30 239.2 23.9 296 59-427 1-337 (342)
95 cd01307 Met_dep_hydrolase_B Me 99.9 6.7E-26 1.5E-30 237.8 24.0 296 38-425 1-317 (338)
96 COG1001 AdeC Adenine deaminase 99.9 3.6E-25 7.9E-30 234.7 28.4 329 17-468 22-363 (584)
97 PRK06846 putative deaminase; V 99.9 1.2E-24 2.7E-29 234.0 30.3 339 33-465 28-406 (410)
98 cd01312 Met_dep_hydrolase_D Me 99.9 8.2E-25 1.8E-29 232.5 26.3 340 44-460 1-381 (381)
99 COG3964 Predicted amidohydrola 99.9 3.1E-24 6.7E-29 207.8 22.2 314 18-425 3-340 (386)
100 cd01309 Met_dep_hydrolase_C Me 99.9 9.6E-24 2.1E-28 222.9 26.6 313 43-463 1-359 (359)
101 COG3454 Metal-dependent hydrol 99.9 4.2E-23 9.2E-28 202.3 21.5 347 21-463 1-377 (377)
102 cd01300 YtcJ_like YtcJ_like me 99.9 2E-23 4.2E-28 229.5 19.4 268 96-420 188-479 (479)
103 KOG3968|consensus 99.9 3.7E-23 7.9E-28 210.0 17.7 361 36-464 27-438 (439)
104 COG3653 N-acyl-D-aspartate/D-g 99.9 7.2E-22 1.6E-26 199.3 26.7 99 382-485 472-573 (579)
105 cd01295 AdeC Adenine deaminase 99.9 6.3E-21 1.4E-25 205.8 28.9 283 63-466 1-293 (422)
106 COG0804 UreC Urea amidohydrola 99.9 1.2E-20 2.6E-25 189.0 20.5 349 18-464 66-457 (568)
107 PF13147 Amidohydro_4: Amidohy 99.8 3.8E-20 8.2E-25 188.9 18.8 299 63-419 1-304 (304)
108 COG1229 FwdA Formylmethanofura 99.8 5.7E-18 1.2E-22 170.1 22.7 85 382-476 436-521 (575)
109 PF01979 Amidohydro_1: Amidohy 99.8 9.8E-19 2.1E-23 182.7 11.8 294 68-422 1-333 (333)
110 cd01306 PhnM PhnM is believed 99.8 3.7E-17 7.9E-22 168.5 22.6 260 70-424 1-312 (325)
111 KOG3892|consensus 99.7 2.8E-17 6.1E-22 157.2 15.4 375 21-465 14-405 (407)
112 PF13594 Amidohydro_5: Amidohy 99.5 1.8E-14 3.9E-19 114.3 7.5 67 39-108 1-68 (68)
113 cd01305 archeal_chlorohydrolas 99.4 2E-12 4.3E-17 131.0 14.1 234 68-400 1-263 (263)
114 PRK06886 hypothetical protein; 99.4 1E-10 2.2E-15 121.1 24.3 268 71-404 20-328 (329)
115 PF07969 Amidohydro_3: Amidohy 99.4 5.8E-12 1.3E-16 135.5 15.4 253 97-420 136-404 (404)
116 cd01292 metallo-dependent_hydr 99.4 1.8E-11 4E-16 123.2 17.2 251 73-400 1-275 (275)
117 cd01310 TatD_DNAse TatD like p 98.6 3.3E-06 7.1E-11 84.5 18.9 243 73-402 1-251 (251)
118 TIGR00010 hydrolase, TatD fami 98.5 6.6E-06 1.4E-10 82.4 19.5 125 73-205 1-130 (252)
119 PRK10812 putative DNAse; Provi 98.4 3.3E-05 7.1E-10 78.2 20.9 249 73-404 3-257 (265)
120 COG0418 PyrC Dihydroorotase [N 98.4 3.2E-05 6.9E-10 76.7 18.9 214 152-404 83-304 (344)
121 cd00530 PTE Phosphotriesterase 98.4 4.2E-05 9.2E-10 78.6 20.1 261 72-401 1-293 (293)
122 COG0084 TatD Mg-dependent DNas 98.2 0.00019 4E-09 71.8 20.0 244 73-403 3-256 (256)
123 PRK10425 DNase TatD; Provision 98.2 0.00022 4.7E-09 71.9 20.0 125 73-205 1-130 (258)
124 KOG2902|consensus 98.1 0.00016 3.4E-09 69.4 16.5 283 68-404 5-301 (344)
125 TIGR01430 aden_deam adenosine 98.1 0.00044 9.5E-09 72.3 20.3 57 326-404 257-313 (324)
126 PRK09875 putative hydrolase; P 98.0 0.00065 1.4E-08 69.4 20.7 256 72-402 7-292 (292)
127 PF12890 DHOase: Dihydro-orota 98.0 5.4E-06 1.2E-10 72.3 4.5 78 175-263 58-141 (142)
128 PRK11449 putative deoxyribonuc 98.0 0.00073 1.6E-08 68.1 20.2 127 71-205 3-136 (258)
129 cd01320 ADA Adenosine deaminas 97.9 0.00094 2E-08 69.8 20.5 26 180-205 170-195 (325)
130 PF01026 TatD_DNase: TatD rela 97.8 0.0016 3.4E-08 65.7 17.8 125 74-205 1-133 (255)
131 COG1099 Predicted metal-depend 97.5 0.0012 2.7E-08 62.9 11.7 125 73-206 2-137 (254)
132 COG1735 Php Predicted metal-de 97.4 0.014 2.9E-07 58.8 18.3 237 98-403 55-314 (316)
133 PRK09358 adenosine deaminase; 97.4 0.012 2.6E-07 61.9 18.8 27 179-205 178-204 (340)
134 PF02126 PTE: Phosphotriestera 97.3 0.0036 7.9E-08 64.5 12.7 263 72-401 7-307 (308)
135 PF04909 Amidohydro_2: Amidohy 96.9 0.015 3.3E-07 58.4 13.8 185 148-403 82-273 (273)
136 PF07908 D-aminoacyl_C: D-amin 96.2 0.0047 1E-07 45.0 2.9 29 452-481 20-48 (48)
137 cd01321 ADGF Adenosine deamina 96.1 0.42 9.2E-06 50.3 18.7 25 181-205 177-203 (345)
138 PF00449 Urease_alpha: Urease 96.1 0.0087 1.9E-07 51.0 4.4 35 18-52 65-99 (121)
139 COG1831 Predicted metal-depend 96.1 0.23 4.9E-06 49.2 14.7 70 321-404 213-283 (285)
140 cd01311 PDC_hydrolase 2-pyrone 96.0 0.52 1.1E-05 47.6 18.3 50 153-205 83-132 (263)
141 COG2159 Predicted metal-depend 96.0 0.73 1.6E-05 47.4 19.1 176 150-405 112-292 (293)
142 PTZ00124 adenosine deaminase; 94.5 1.5 3.3E-05 46.4 16.1 53 326-400 294-346 (362)
143 cd00443 ADA_AMPD Adenosine/AMP 94.0 2.9 6.4E-05 43.2 17.1 25 181-205 151-176 (305)
144 COG4464 CapC Capsular polysacc 92.0 1.2 2.6E-05 42.8 9.4 39 73-111 1-40 (254)
145 PF00962 A_deaminase: Adenosin 91.4 0.9 1.9E-05 47.4 9.1 54 149-205 146-202 (331)
146 COG3618 Predicted metal-depend 89.0 28 0.0006 35.3 19.5 24 182-205 123-146 (279)
147 COG1816 Add Adenosine deaminas 88.5 7.9 0.00017 40.6 12.9 27 179-205 181-207 (345)
148 KOG1097|consensus 87.2 39 0.00085 35.9 17.0 25 181-205 225-249 (399)
149 PRK08392 hypothetical protein; 87.0 17 0.00038 35.3 13.9 35 74-112 1-37 (215)
150 PF07969 Amidohydro_3: Amidohy 85.5 0.24 5.2E-06 53.1 -0.1 28 240-268 227-254 (404)
151 PRK08609 hypothetical protein; 83.7 15 0.00033 41.4 13.2 32 74-109 336-367 (570)
152 PTZ00372 endonuclease 4-like p 82.0 40 0.00086 36.3 14.7 120 118-261 113-241 (413)
153 COG0821 gcpE 1-hydroxy-2-methy 81.0 73 0.0016 33.0 16.6 169 95-302 40-208 (361)
154 PRK01060 endonuclease IV; Prov 78.3 21 0.00045 36.1 11.0 89 153-260 14-111 (281)
155 smart00518 AP2Ec AP endonuclea 76.5 70 0.0015 32.1 14.2 86 155-260 15-106 (273)
156 COG5016 Pyruvate/oxaloacetate 74.9 75 0.0016 33.9 13.6 165 87-262 24-211 (472)
157 PRK03892 ribonuclease P protei 72.9 94 0.002 30.1 14.1 77 119-205 15-91 (216)
158 PRK14042 pyruvate carboxylase 71.5 1.1E+02 0.0024 34.7 15.2 128 93-225 98-227 (596)
159 PRK12330 oxaloacetate decarbox 70.3 1.3E+02 0.0027 33.5 14.9 128 93-225 99-230 (499)
160 PRK12331 oxaloacetate decarbox 69.9 1.1E+02 0.0023 33.5 14.3 126 94-224 99-226 (448)
161 PRK12581 oxaloacetate decarbox 69.5 1.3E+02 0.0027 33.2 14.6 130 90-225 103-236 (468)
162 cd07937 DRE_TIM_PC_TC_5S Pyruv 68.8 1.1E+02 0.0024 31.1 13.4 173 97-274 97-271 (275)
163 COG5016 Pyruvate/oxaloacetate 67.4 1.7E+02 0.0037 31.3 14.2 135 93-233 100-243 (472)
164 PRK09195 gatY tagatose-bisphos 66.4 98 0.0021 31.6 12.3 120 95-222 88-227 (284)
165 PRK07328 histidinol-phosphatas 66.1 1.5E+02 0.0033 29.8 16.0 34 73-109 3-36 (269)
166 PRK14042 pyruvate carboxylase 65.9 2.4E+02 0.0053 32.1 19.6 161 86-256 21-202 (596)
167 PRK12738 kbaY tagatose-bisphos 65.1 1.1E+02 0.0024 31.3 12.4 118 96-221 89-226 (286)
168 PRK14041 oxaloacetate decarbox 64.4 1.2E+02 0.0026 33.4 13.3 129 90-224 93-225 (467)
169 cd00950 DHDPS Dihydrodipicolin 63.9 64 0.0014 32.7 10.7 98 161-260 31-135 (284)
170 TIGR01856 hisJ_fam histidinol 63.6 1.6E+02 0.0035 29.3 18.9 33 74-109 1-33 (253)
171 PRK14040 oxaloacetate decarbox 63.2 2.7E+02 0.0059 31.7 20.2 160 87-256 23-203 (593)
172 PRK09248 putative hydrolase; V 61.5 1.6E+02 0.0036 29.0 12.9 34 73-109 4-37 (246)
173 PRK07709 fructose-bisphosphate 60.8 1.7E+02 0.0036 30.0 12.8 120 95-222 91-228 (285)
174 TIGR03217 4OH_2_O_val_ald 4-hy 60.6 2.1E+02 0.0045 30.0 13.8 104 97-207 93-199 (333)
175 cd00408 DHDPS-like Dihydrodipi 60.1 93 0.002 31.4 11.1 95 162-260 29-132 (281)
176 TIGR01858 tag_bisphos_ald clas 59.8 1.4E+02 0.0031 30.4 12.1 119 95-221 86-224 (282)
177 PRK08195 4-hyroxy-2-oxovalerat 59.1 1.9E+02 0.0042 30.3 13.4 120 97-223 94-217 (337)
178 PRK08610 fructose-bisphosphate 58.3 1.8E+02 0.004 29.7 12.6 119 96-222 92-228 (286)
179 PRK03170 dihydrodipicolinate s 57.9 99 0.0021 31.5 10.9 97 162-260 33-136 (292)
180 COG0826 Collagenase and relate 57.8 58 0.0013 34.3 9.2 111 151-274 14-136 (347)
181 TIGR00587 nfo apurinic endonuc 57.5 1E+02 0.0022 31.1 10.8 91 153-261 14-111 (274)
182 TIGR01431 adm_rel adenosine de 56.0 3.2E+02 0.0069 30.2 16.0 21 326-346 396-416 (479)
183 PRK09282 pyruvate carboxylase 55.8 1.8E+02 0.0039 33.1 13.3 125 94-224 99-226 (592)
184 PRK12737 gatY tagatose-bisphos 55.0 2.1E+02 0.0045 29.3 12.4 119 95-221 88-226 (284)
185 cd00019 AP2Ec AP endonuclease 54.5 1.9E+02 0.0042 28.9 12.4 90 153-261 12-108 (279)
186 PRK06361 hypothetical protein; 53.7 2.1E+02 0.0046 27.4 18.2 56 327-403 155-210 (212)
187 cd00952 CHBPH_aldolase Trans-o 52.6 1.1E+02 0.0025 31.5 10.3 97 162-260 40-144 (309)
188 TIGR00674 dapA dihydrodipicoli 51.5 1.5E+02 0.0033 30.1 11.0 97 162-260 30-133 (285)
189 TIGR01108 oadA oxaloacetate de 50.2 2.7E+02 0.0058 31.7 13.4 126 93-224 93-221 (582)
190 PF03932 CutC: CutC family; I 50.0 2.5E+02 0.0053 27.2 12.3 127 95-224 11-144 (201)
191 cd00951 KDGDH 5-dehydro-4-deox 49.3 1.6E+02 0.0036 29.9 10.8 108 161-272 31-147 (289)
192 cd00947 TBP_aldolase_IIB Tagat 48.4 1.9E+02 0.0041 29.4 10.8 66 153-222 150-221 (276)
193 PRK14040 oxaloacetate decarbox 48.0 3.4E+02 0.0073 30.9 13.8 127 93-224 99-227 (593)
194 cd07944 DRE_TIM_HOA_like 4-hyd 47.4 3.1E+02 0.0068 27.6 14.1 104 97-207 88-194 (266)
195 PRK07998 gatY putative fructos 47.2 2.3E+02 0.005 29.0 11.2 123 96-223 89-225 (283)
196 PRK12999 pyruvate carboxylase; 46.9 3.1E+02 0.0067 34.0 14.2 180 89-274 624-813 (1146)
197 PRK07709 fructose-bisphosphate 46.3 3.4E+02 0.0074 27.7 12.5 130 137-280 78-227 (285)
198 PRK11858 aksA trans-homoaconit 46.1 2.1E+02 0.0045 30.6 11.3 78 145-225 139-218 (378)
199 TIGR03249 KdgD 5-dehydro-4-deo 45.9 2E+02 0.0043 29.4 10.8 109 162-272 37-152 (296)
200 PRK12857 fructose-1,6-bisphosp 45.5 3.4E+02 0.0074 27.7 12.2 118 96-221 89-226 (284)
201 TIGR03822 AblA_like_2 lysine-2 45.1 3E+02 0.0066 28.5 12.2 81 178-259 148-235 (321)
202 TIGR01235 pyruv_carbox pyruvat 43.5 4.3E+02 0.0094 32.7 14.6 132 90-225 623-762 (1143)
203 PRK13352 thiamine biosynthesis 42.9 4.6E+02 0.01 28.2 15.9 50 64-114 35-100 (431)
204 cd00953 KDG_aldolase KDG (2-ke 42.8 1.6E+02 0.0035 29.9 9.5 127 70-202 1-127 (279)
205 PRK03620 5-dehydro-4-deoxygluc 42.6 2.4E+02 0.0052 29.0 10.9 109 162-272 39-154 (303)
206 TIGR00683 nanA N-acetylneurami 42.3 2.4E+02 0.0052 28.8 10.7 97 162-260 32-137 (290)
207 TIGR01108 oadA oxaloacetate de 41.7 5.8E+02 0.012 29.0 20.7 159 87-256 17-197 (582)
208 PRK04147 N-acetylneuraminate l 41.7 2.4E+02 0.0052 28.7 10.7 96 163-260 37-139 (293)
209 PRK08508 biotin synthase; Prov 41.5 2.2E+02 0.0048 28.9 10.3 75 151-226 44-118 (279)
210 PF02811 PHP: PHP domain; Int 41.5 19 0.00041 33.1 2.3 35 74-111 1-38 (175)
211 cd07943 DRE_TIM_HOA 4-hydroxy- 41.4 3.8E+02 0.0081 26.8 13.6 105 96-207 90-196 (263)
212 PRK12581 oxaloacetate decarbox 40.9 5.3E+02 0.012 28.4 19.3 171 73-256 20-211 (468)
213 PRK06806 fructose-bisphosphate 40.1 3.3E+02 0.0072 27.8 11.2 122 96-223 89-226 (281)
214 cd00954 NAL N-Acetylneuraminic 40.0 3E+02 0.0065 27.9 11.1 97 162-260 32-137 (288)
215 TIGR02313 HpaI-NOT-DapA 2,4-di 39.8 2.7E+02 0.0059 28.5 10.7 109 162-272 32-152 (294)
216 PF02679 ComA: (2R)-phospho-3- 38.8 1.6E+02 0.0036 29.3 8.4 11 102-112 11-21 (244)
217 PRK15447 putative protease; Pr 38.7 2.9E+02 0.0062 28.4 10.7 56 146-203 10-68 (301)
218 TIGR00167 cbbA ketose-bisphosp 38.1 4.6E+02 0.0099 26.9 12.2 120 95-222 91-231 (288)
219 TIGR01859 fruc_bis_ald_ fructo 38.1 3.3E+02 0.0072 27.7 10.9 68 152-223 154-226 (282)
220 PF01791 DeoC: DeoC/LacD famil 37.6 1.9E+02 0.0041 28.4 8.9 104 92-203 20-132 (236)
221 PF00682 HMGL-like: HMGL-like 37.4 3.9E+02 0.0084 26.0 11.1 116 88-207 64-192 (237)
222 PF00701 DHDPS: Dihydrodipicol 37.4 1.9E+02 0.0042 29.3 9.2 95 162-260 33-136 (289)
223 TIGR01235 pyruv_carbox pyruvat 36.5 9E+02 0.019 30.0 15.8 149 118-280 589-758 (1143)
224 PRK05835 fructose-bisphosphate 35.7 5.2E+02 0.011 26.8 12.5 51 153-206 157-214 (307)
225 PRK11858 aksA trans-homoaconit 35.3 5.8E+02 0.012 27.2 16.4 157 88-260 23-196 (378)
226 TIGR02660 nifV_homocitr homoci 35.1 4.5E+02 0.0097 27.8 11.8 77 146-225 137-215 (365)
227 COG0329 DapA Dihydrodipicolina 35.0 2.6E+02 0.0056 28.8 9.6 98 161-260 35-139 (299)
228 PRK09282 pyruvate carboxylase 34.6 7.4E+02 0.016 28.2 18.6 179 87-280 22-223 (592)
229 TIGR03581 EF_0839 conserved hy 34.4 2.6E+02 0.0056 27.4 8.5 41 155-198 139-179 (236)
230 PRK15108 biotin synthase; Prov 33.9 5.8E+02 0.012 26.8 12.2 59 162-222 90-148 (345)
231 TIGR01496 DHPS dihydropteroate 33.9 5E+02 0.011 26.0 16.6 98 150-260 23-127 (257)
232 PF01261 AP_endonuc_2: Xylose 33.3 4E+02 0.0087 24.7 10.8 52 151-202 27-90 (213)
233 PRK07945 hypothetical protein; 33.1 5.9E+02 0.013 26.6 13.6 36 73-112 97-134 (335)
234 PF01116 F_bP_aldolase: Fructo 33.1 5.1E+02 0.011 26.5 11.3 106 94-205 86-214 (287)
235 cd07948 DRE_TIM_HCS Saccharomy 33.1 5.2E+02 0.011 26.0 13.3 56 149-207 139-195 (262)
236 TIGR02109 PQQ_syn_pqqE coenzym 32.7 4.4E+02 0.0095 27.6 11.3 77 184-261 69-155 (358)
237 PRK06801 hypothetical protein; 32.6 4.8E+02 0.01 26.7 11.0 105 148-254 26-131 (286)
238 PRK12738 kbaY tagatose-bisphos 32.5 4.6E+02 0.0099 26.9 10.7 107 147-255 25-132 (286)
239 cd00945 Aldolase_Class_I Class 30.8 4.3E+02 0.0094 24.4 12.8 102 89-204 11-121 (201)
240 PRK12737 gatY tagatose-bisphos 30.8 4.8E+02 0.011 26.6 10.6 74 181-255 58-132 (284)
241 PRK07084 fructose-bisphosphate 30.7 6.4E+02 0.014 26.3 11.5 64 153-220 166-240 (321)
242 TIGR01858 tag_bisphos_ald clas 30.6 4.7E+02 0.01 26.7 10.5 74 181-255 56-130 (282)
243 PF07071 DUF1341: Protein of u 30.2 1.6E+02 0.0036 28.3 6.4 43 154-199 138-180 (218)
244 cd07939 DRE_TIM_NifV Streptomy 30.1 5.6E+02 0.012 25.5 13.0 58 147-207 135-193 (259)
245 TIGR00126 deoC deoxyribose-pho 30.0 3.7E+02 0.008 26.1 9.2 111 86-206 13-127 (211)
246 PRK07535 methyltetrahydrofolat 29.4 6E+02 0.013 25.5 13.1 57 333-402 189-245 (261)
247 PF05853 DUF849: Prokaryotic p 29.2 4.3E+02 0.0092 26.8 9.9 107 145-254 144-260 (272)
248 PRK07315 fructose-bisphosphate 29.1 5.2E+02 0.011 26.5 10.6 122 96-223 91-228 (293)
249 PRK08444 hypothetical protein; 28.8 5.8E+02 0.012 26.9 11.1 120 152-274 85-230 (353)
250 PRK13111 trpA tryptophan synth 28.0 3.5E+02 0.0076 27.2 9.0 41 155-202 108-148 (258)
251 cd01301 rDP_like renal dipepti 27.5 5.9E+02 0.013 26.3 10.8 50 335-398 258-307 (309)
252 PRK05301 pyrroloquinoline quin 27.5 7.5E+02 0.016 26.1 13.6 24 238-261 141-164 (378)
253 TIGR00190 thiC thiamine biosyn 27.4 8E+02 0.017 26.4 14.1 20 95-114 81-100 (423)
254 PRK09195 gatY tagatose-bisphos 27.3 5.5E+02 0.012 26.2 10.3 72 183-255 60-132 (284)
255 PRK09856 fructoselysine 3-epim 27.1 6.3E+02 0.014 25.0 13.1 94 153-260 15-112 (275)
256 PF01261 AP_endonuc_2: Xylose 27.0 4.5E+02 0.0098 24.3 9.5 90 159-260 3-93 (213)
257 PRK06256 biotin synthase; Vali 26.9 4.6E+02 0.01 27.2 10.1 74 151-226 95-168 (336)
258 PRK05692 hydroxymethylglutaryl 26.8 6.7E+02 0.015 25.5 11.0 57 148-207 152-210 (287)
259 PF04273 DUF442: Putative phos 26.2 3.5E+02 0.0075 23.3 7.4 51 154-207 47-97 (110)
260 PRK00507 deoxyribose-phosphate 25.8 6.3E+02 0.014 24.7 11.3 113 86-206 17-131 (221)
261 PRK06806 fructose-bisphosphate 25.3 7.3E+02 0.016 25.2 10.8 73 187-260 65-139 (281)
262 PLN02417 dihydrodipicolinate s 25.3 6.8E+02 0.015 25.2 10.7 62 162-223 33-99 (280)
263 cd00952 CHBPH_aldolase Trans-o 25.2 5.8E+02 0.013 26.2 10.3 109 86-202 24-141 (309)
264 KOG2550|consensus 24.6 90 0.0019 33.3 4.0 67 62-132 30-112 (503)
265 PRK00912 ribonuclease P protei 24.4 1.4E+02 0.003 29.5 5.3 58 326-404 160-217 (237)
266 PRK06552 keto-hydroxyglutarate 24.4 6.3E+02 0.014 24.5 9.8 97 88-205 22-118 (213)
267 PF01116 F_bP_aldolase: Fructo 24.1 3E+02 0.0066 28.1 7.8 23 181-203 26-48 (287)
268 TIGR03551 F420_cofH 7,8-dideme 24.0 4.2E+02 0.0091 27.7 9.1 71 151-224 74-155 (343)
269 COG0075 Serine-pyruvate aminot 23.6 4.5E+02 0.0096 28.2 9.1 80 154-262 93-172 (383)
270 PF00701 DHDPS: Dihydrodipicol 23.1 7.6E+02 0.016 24.9 10.7 112 86-203 17-134 (289)
271 cd07938 DRE_TIM_HMGL 3-hydroxy 23.0 7.9E+02 0.017 24.8 13.1 57 148-207 146-204 (274)
272 COG1453 Predicted oxidoreducta 23.0 9.3E+02 0.02 25.6 11.3 81 87-171 30-114 (391)
273 TIGR00238 KamA family protein. 22.9 8.7E+02 0.019 25.3 11.2 82 179-261 172-260 (331)
274 PRK07315 fructose-bisphosphate 22.9 7.3E+02 0.016 25.4 10.3 71 183-255 61-134 (293)
275 cd00408 DHDPS-like Dihydrodipi 22.9 6.9E+02 0.015 25.0 10.3 109 86-202 13-129 (281)
276 TIGR02090 LEU1_arch isopropylm 22.9 8E+02 0.017 25.9 11.0 77 146-225 136-214 (363)
277 PRK08185 hypothetical protein; 22.4 8.4E+02 0.018 24.9 12.1 124 94-221 81-222 (283)
278 PRK00366 ispG 4-hydroxy-3-meth 22.4 9.4E+02 0.02 25.4 17.5 169 96-302 47-215 (360)
279 PRK07998 gatY putative fructos 22.0 7.6E+02 0.016 25.2 10.1 78 181-259 58-138 (283)
280 PRK15446 phosphonate metabolis 22.0 1.3E+02 0.0029 32.0 5.0 44 179-226 210-254 (383)
281 cd00947 TBP_aldolase_IIB Tagat 21.9 8.5E+02 0.018 24.7 10.8 74 181-255 53-127 (276)
282 PF15585 Imm46: Immunity prote 21.8 66 0.0014 28.5 2.1 51 400-469 70-120 (129)
283 PF00248 Aldo_ket_red: Aldo/ke 21.8 7.9E+02 0.017 24.3 14.1 118 87-205 13-138 (283)
284 KOG4549|consensus 21.8 2.1E+02 0.0046 25.5 5.1 22 58-80 6-27 (144)
285 cd07945 DRE_TIM_CMS Leptospira 21.7 8.5E+02 0.018 24.7 11.6 109 94-206 77-201 (280)
286 PF10055 DUF2292: Uncharacteri 21.4 90 0.0019 21.5 2.2 16 37-52 18-33 (38)
287 cd07940 DRE_TIM_IPMS 2-isoprop 21.3 8.3E+02 0.018 24.4 12.6 58 147-207 139-200 (268)
288 PLN02858 fructose-bisphosphate 21.0 8.3E+02 0.018 31.0 12.1 70 153-223 1252-1327(1378)
289 TIGR02090 LEU1_arch isopropylm 20.7 9E+02 0.019 25.5 10.9 107 88-205 19-134 (363)
290 PRK11572 copper homeostasis pr 20.6 8.6E+02 0.019 24.3 16.9 128 95-225 12-146 (248)
291 PRK09856 fructoselysine 3-epim 20.5 8.3E+02 0.018 24.1 11.4 56 184-259 91-150 (275)
292 TIGR00542 hxl6Piso_put hexulos 20.2 8.6E+02 0.019 24.2 13.6 90 153-259 18-115 (279)
No 1
>KOG2584|consensus
Probab=100.00 E-value=3.3e-131 Score=985.94 Aligned_cols=514 Identities=56% Similarity=0.935 Sum_probs=501.6
Q ss_pred ccccccccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcch
Q psy10113 13 HLQSSQNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDD 92 (596)
Q Consensus 13 ~~~~~~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~ 92 (596)
+.+..+++++||||+|||.|.++.+|||++||+|++|++++.+|.+.++|||+|++|+||+||+|||+++||++..+.||
T Consensus 8 ~~~v~s~rllikgg~vvN~d~~~~aDV~vedGiI~~vg~~l~ipgg~~~ida~g~~ViPGgID~Hthlq~p~~G~ts~Dd 87 (522)
T KOG2584|consen 8 SPHVASNRLLIKGGRVVNDDQSFKADVYVEDGIIKEVGENLIIPGGVKVIDATGKMVIPGGIDPHTHLQMPFMGMTSVDD 87 (522)
T ss_pred cccccccceeeeCCEEEccCCceeeeEEeccCEEEEecccEEcCCCceEEecCCcEEecCccCccceeccccCCccchhh
Confidence 34566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEe
Q psy10113 93 FYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFM 172 (596)
Q Consensus 93 ~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~ 172 (596)
|++|+++||+||||||+||+.|..+.+++++|+.|++|++++.||||++|+++++|.+++.++|+.+++++|+|+|++||
T Consensus 88 F~~GTkAAlaGGtTmiID~vlp~~~~slv~afe~wr~~Ad~k~cCDyglhv~It~W~~~v~eem~~l~~ekGvnsF~~fm 167 (522)
T KOG2584|consen 88 FFQGTKAALAGGTTMIIDFVLPDKGTSLVEAFEKWREWADPKVCCDYGLHVGITWWSPSVKEEMEILVKEKGVNSFKFFM 167 (522)
T ss_pred hhcccHHHhcCCceEEEEEecCCCCchHHHHHHHHHhhcCCceeeeeeeeEeeeecCcchHHHHHHHhhhcCcceEEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCC
Q psy10113 173 AYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDC 252 (596)
Q Consensus 173 ~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~ 252 (596)
+|++.++++|++|++.+..|+++|+++++||||++++.+.+++++++|+++||||.+|||+++|+||++|++.+|++.+|
T Consensus 168 ayk~~~~v~d~~lye~l~~~~~lgala~vHAEngd~iae~q~~~l~~gitgPEgh~lSRPee~EaEA~~rai~ia~~~nc 247 (522)
T KOG2584|consen 168 AYKDLYMVRDSELYEALKVCAELGALAMVHAENGDAIAEGQQRLLELGITGPEGHELSRPEELEAEATNRAITIARQANC 247 (522)
T ss_pred eeccccccCHHHHHHHHHHHhhcchhheehhhcchhhhhhhhHHHHcCCcCcccccccCchhhhHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCc-cccccccccCCCCCCCCCcHHHHHHHHh
Q psy10113 253 PLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCT-WHDQAAHVLSPPLRPDETTPTHLLTLLN 331 (596)
Q Consensus 253 p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~-~~~~~~~~~~Pplr~~~~~~~~l~~~l~ 331 (596)
|+|++|+++..+++.|.++|++ |. .|++|++.++|++++.+||.+ |.+++.|+++||+|+++++++.||.+|+
T Consensus 248 PlyvvhVmsksaa~~Ia~aRk~----g~--~v~gepita~l~~dg~hy~~~~w~~Aa~~v~sPPlr~d~~t~~~L~~lLa 321 (522)
T KOG2584|consen 248 PLYVVHVMSKSAADAIALARKK----GR--VVFGEPITASLGTDGSHYWSKDWDHAAAFVTSPPLRPDPTTPDGLMDLLA 321 (522)
T ss_pred CcceEEEeehhHHHHHHHHHhc----Cc--eeecccchhhhcccchhhccCChhhcceeeeCCCCCCCCCCHHHHHHHHh
Confidence 9999999999999999999999 99 999999999999999999999 9999999999999999999999999999
Q ss_pred cCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCccccc
Q psy10113 332 ENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIA 411 (596)
Q Consensus 332 ~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~ 411 (596)
+|+++.+|||||+|+..||.+|+++|++||+|++|+|+||+++|+++|..|.|++++||+++|+|+||+||+||+||+|+
T Consensus 322 ~g~L~~tgSdhctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~G~md~~~fVavtstnaAkifnlYprKGrIa 401 (522)
T KOG2584|consen 322 EGDLQLTGSDHCTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIA 401 (522)
T ss_pred cCccceeecCCCCCCHHHHhhccCccccCCCccccccccceeeeehhcccCccCcccEEEEecccchhheeccCcCceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecCCCCCCccccCC
Q psy10113 412 EGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTNPPFVYEGQ 491 (596)
Q Consensus 412 ~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~~~~~~~~~~~~ 491 (596)
+|+|||||||||++.++|++++||++.+||+||||+|+|.|..||++|||||+||++.+.+|.||||++++||+|+|+++
T Consensus 402 vGsDADiVIwdp~at~tIS~~th~~~~d~NifEGm~~~G~plvtIsrGriv~eng~~~v~~g~G~fip~~~f~~~vy~~i 481 (522)
T KOG2584|consen 402 VGSDADIVIWDPNATKTISAKTHHSANDFNIFEGMTVHGVPLVTISRGRVVYENGNLVVTEGSGRFIPRSPFPDYVYKRI 481 (522)
T ss_pred ccCCCcEEEECCCcceEeccccccccccceeecCcEecceeEEEEeCCeEEEecCcEEEecCCCceeeCCCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccccCcccchhccccccCCCCCCCCccCCCCCCCCCCCCCccCCCCCCCccCC
Q psy10113 492 TPEVDIDHKENHEVIEEIREKLHGLTPNNNHKISAPRSPSYSSTSSVYGDADYGHNQIH 550 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (596)
++|++.. ++++|+|. ||+|++ . +++. +++.++++ ++++++|
T Consensus 482 ~~r~~~~---~~~~v~r~---~y~~~~------~---~~~~--~~~~~~~~-~~~~~~p 522 (522)
T KOG2584|consen 482 KARDKTA---ELRGVPRG---PYDGPV------A---EVTV--TPKIGTPA-PSAATSP 522 (522)
T ss_pred HhhhccC---Cccccccc---ccCCcc------e---eeee--ccccCCCC-cccccCC
Confidence 9999999 99999999 999999 6 6665 78888877 6655444
No 2
>PLN02942 dihydropyrimidinase
Probab=100.00 E-value=3.9e-68 Score=581.48 Aligned_cols=457 Identities=45% Similarity=0.789 Sum_probs=411.7
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHH
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGT 97 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~ 97 (596)
+.+++|+|++|++.+....++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+.+++.+....++|++++
T Consensus 4 ~~~lli~~~~v~~~~~~~~~~i~I~~g~I~~i~~~~~~~~~~~~iD~~g~~v~PG~ID~H~H~~~~~~~~~~~ed~~s~s 83 (486)
T PLN02942 4 STKILIKGGTVVNAHHQELADVYVEDGIIVAVAPNLKVPDDVRVIDATGKFVMPGGIDPHTHLAMPFMGTETIDDFFSGQ 83 (486)
T ss_pred CCcEEEECcEEEcCCCCeEeEEEEECCEEEEEcCCCCCCCCCeEEECCCCEEecCEeeeeeccCcccCCCcccchHHHHH
Confidence 56899999999997766779999999999999976543346789999999999999999999998876667789999999
Q ss_pred HHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCC
Q psy10113 98 KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGL 177 (596)
Q Consensus 98 ~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~ 177 (596)
++|+++||||+.|+..+. .....+.++.....+. ...++|+++...+.+.....+++.++++..|+.+|++|+++++.
T Consensus 84 ~aAl~gGvTTv~D~~~~~-~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~e~~~l~~~~gv~~~k~~~~~~~~ 161 (486)
T PLN02942 84 AAALAGGTTMHIDFVIPV-NGNLLAGYEAYEKKAE-KSCMDYGFHMAITKWDDTVSRDMETLVKEKGINSFKFFMAYKGS 161 (486)
T ss_pred HHHHcCCCeEEEeCCCCC-CCCHHHHHHHHHHHHh-hcCCCEEEEEEecCCcHhHHHHHHHHHHhCCCceEEEEEecCCC
Confidence 999999999999996554 3344666666666665 45789998877666665556788888776799999999998877
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEE
Q psy10113 178 YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVV 257 (596)
Q Consensus 178 ~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~ 257 (596)
+.++++.+.+.++.++++|.++++|+|+..++....++....|..+++.|..++|...|..++.+++.++..+++++|++
T Consensus 162 ~~~~~~~l~~~~~~a~~~~~~v~~HaE~~~~~~~~~~~~~~~G~~~~~~~~~~rP~~~E~~av~~~~~la~~~g~~~~i~ 241 (486)
T PLN02942 162 LMVTDELLLEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATARAIRLAKFVNTPLYVV 241 (486)
T ss_pred CCCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHcCCCChhhhhccCCchHHHHHHHHHHHHHHHhCCCEEEE
Confidence 77889999999999999999999999998888777788888999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCc-cccccccccCCCCCCCCCcHHHHHHHHhcCCcc
Q psy10113 258 HIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCT-WHDQAAHVLSPPLRPDETTPTHLLTLLNENALQ 336 (596)
Q Consensus 258 hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~-~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~ 336 (596)
|+++.+.++.|+.+++. |. .|++|+++++|.++..++..+ +..+..+.++||+|. ..++++||++++.|+++
T Consensus 242 H~s~~~~~e~i~~~k~~----G~--~Vt~e~~ph~L~l~~~~~~~~~~~~~~~~k~~PPlr~-~~~~~~L~~~l~~G~i~ 314 (486)
T PLN02942 242 HVMSIDAMEEIARARKS----GQ--RVIGEPVVSGLVLDDSKLWDPDFTIASKYVMSPPIRP-AGHGKALQAALSSGILQ 314 (486)
T ss_pred ECCCHHHHHHHHHHHHC----CC--cEEEEECchhheeCHHHhcCcccccCcceEECCCCCC-HHHHHHHHHHhcCCceE
Confidence 99999999999999999 99 999999999999998887653 445667889999998 78899999999999999
Q ss_pred EEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCc
Q psy10113 337 TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDA 416 (596)
Q Consensus 337 ~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~A 416 (596)
++||||+|++...|+.+.++|..+|.|+.|+|.+++++|++++..+.+++.++++++|.|||++||+++++|+|++|++|
T Consensus 315 ~igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~i~~~~~l~~~t~~pA~~lgl~~~~G~l~~G~~A 394 (486)
T PLN02942 315 LVGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTMVESGQISPTDYVRVTSTECAKIFNIYPRKGAILAGSDA 394 (486)
T ss_pred EEECCCCCCChHHhhcccCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCCCcCCCCcC
Confidence 99999999999999887778999999999999999999998888888999999999999999999998889999999999
Q ss_pred cEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecCCCC
Q psy10113 417 DIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTN 483 (596)
Q Consensus 417 DlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~~~~ 483 (596)
|||+||++..++++.+.+++...++||+|+++.|+|..||++|++||+||++...+|.|+|++++.+
T Consensus 395 Dlv~vd~~~~~~v~~~~~~s~~~~~py~g~~l~g~v~~tiv~G~~v~~~g~~~~~~~~G~~~~~~~~ 461 (486)
T PLN02942 395 DIIILNPNSTFTISAKTHHSRIDTNVYEGRRGKGKVEVTISQGRVVWENGELKVVRGSGRYIEMPPF 461 (486)
T ss_pred CEEEEcCCccEEEcHHHccccCCCCCccCcEeeeeEEEEEECCEEEEECCEEeccCCCceEecCCCc
Confidence 9999999999999998889999999999999999999999999999999999888999999999876
No 3
>PRK13404 dihydropyrimidinase; Provisional
Probab=100.00 E-value=6.9e-66 Score=561.65 Aligned_cols=454 Identities=37% Similarity=0.614 Sum_probs=402.1
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccc-cCCCCcchHHHH
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELEL-MGATSVDDFYHG 96 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~-~~~~~~d~~~~g 96 (596)
.++++|+|++|++++....++|+|+||+|++|++.. +.+.++||++|++|||||||+|+|+..+. .+....+++.++
T Consensus 3 ~~d~~i~~~~v~~~~~~~~~~i~I~dg~I~~i~~~~--~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~e~~~~~ 80 (477)
T PRK13404 3 AFDLVIRGGTVVTATDTFQADIGIRGGRIAALGEGL--GPGAREIDATGRLVLPGGVDSHCHIDQPSGDGIMMADDFYTG 80 (477)
T ss_pred CCcEEEECCEEEcCCCceEEEEEEECCEEEEecCCC--CCCCeEEECCCCEEecCEEEeEEcCCccccCCccccchHHHH
Confidence 357899999999987667899999999999998754 34678999999999999999999997652 233457899999
Q ss_pred HHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHH-HHHHHHHHHcCCCEEEEEeecC
Q psy10113 97 TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQ-QEMAELCEKHGVNSFKTFMAYK 175 (596)
Q Consensus 97 ~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~lv~~~Gv~~~k~~~~~~ 175 (596)
+++++++||||++|+....+...+.++++..+..+.....++|++|..++...++.. +++..+++ .|+.+||+|+++.
T Consensus 81 s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~~v~~l~~-~G~~~iKi~~~~~ 159 (477)
T PRK13404 81 TVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAVIDYAFHLIVADPTEEVLTEELPALIA-QGYTSFKVFMTYD 159 (477)
T ss_pred HHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcEEEEEEEEEecCCChhhHHHHHHHHHH-cCCCEEEEEecCC
Confidence 999999999999998765566678888888888887788999999987776555433 67777764 5999999998754
Q ss_pred CCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeE
Q psy10113 176 GLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLY 255 (596)
Q Consensus 176 ~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~ 255 (596)
+ ..+++++++++++.|+++|.++.+|+|+..++....+.+...|.+.++.|...+|+..|.+++.+++.+|+.+++|+|
T Consensus 160 ~-~~~~~~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~~~~~~~G~~~~~~~~~~rp~~~E~~~v~~~~~la~~~g~~~h 238 (477)
T PRK13404 160 D-LKLDDRQILDVLAVARRHGAMVMVHAENHDMIAWLTKRLLAAGLTAPKYHAISRPMLAEREATHRAIALAELVDVPIL 238 (477)
T ss_pred C-CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHCCCcchhhccccCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 4 457899999999999999999999999999888777888999999999999999999999999999999999999999
Q ss_pred EEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCc
Q psy10113 256 VVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENAL 335 (596)
Q Consensus 256 i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~ 335 (596)
++|+++..+.+.|+.+++. |+ .+++|+|++||.++..++...-..+..+.++||+|. .+++++||++|..|.+
T Consensus 239 i~Hvs~~~~~~~i~~~k~~----g~--~vt~e~~ph~L~l~~~~~~~~~~~g~~~k~~Pplr~-~~d~~aL~~~l~~G~i 311 (477)
T PRK13404 239 IVHVSGREAAEQIRRARGR----GL--KIFAETCPQYLFLTAEDLDRPGMEGAKYICSPPPRD-KANQEAIWNGLADGTF 311 (477)
T ss_pred EEECCCHHHHHHHHHHHHC----CC--eEEEEEChhhhccCHHHhcCccccCCceEECCCCCC-hHHHHHHHHHHhCCCc
Confidence 9999999999999999999 99 999999999999998876431113456789999998 7899999999999999
Q ss_pred cEEeCCCCCCChhhh----hhC-CCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccc
Q psy10113 336 QTTGSDNCTFNKNQK----ELG-KDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVI 410 (596)
Q Consensus 336 ~~~gsD~~~~~~~~~----~~g-~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I 410 (596)
.+++|||+|+....| ..+ ..+|+.+|.|++|+|.++++++++++..+.++++++++++|.||||+||+++++|+|
T Consensus 312 d~i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll~~~v~~~~ls~~~~~~~~t~~pA~~lgl~~~~G~i 391 (477)
T PRK13404 312 EVFSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLFSEGVVKGRISLNRFVALTSTNPAKLYGLYPRKGAI 391 (477)
T ss_pred eEEecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCcee
Confidence 999999999986544 111 237999999999999999999999988889999999999999999999998889999
Q ss_pred cCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecCCC
Q psy10113 411 AEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHT 482 (596)
Q Consensus 411 ~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~~~ 482 (596)
++|++||||+||++..++++.+.+++...++||+|+.+.|+|..||++|++||+||++...+|.|+||++.+
T Consensus 392 ~~G~~ADlvivd~~~~~~v~~~~~~~~~~~sp~~g~~~~g~v~~tiv~G~vv~~~g~~~~~~~~G~~~~~~~ 463 (477)
T PRK13404 392 AIGADADIAIWDPDREVTITNADLHHAADYTPYEGMRVTGWPVTVLSRGRVVVEDGELVAERGSGQFLARSL 463 (477)
T ss_pred cCCCcCCEEEEcCCccEEEchHHhcccCCCCcccceEEeeeEEEEEECCEEEEECCEEecCCCceeEecCCC
Confidence 999999999999999999999999999999999999999999999999999999999988888999999743
No 4
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.6e-66 Score=550.06 Aligned_cols=428 Identities=30% Similarity=0.434 Sum_probs=393.7
Q ss_pred ccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHH
Q psy10113 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTK 98 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~ 98 (596)
++++|+|++||+++....+||+|+||+|++|+.++....+.++||++|++|+||+||.|+|+..|+. ..+++|.++++
T Consensus 1 ~~~lIk~~~iv~~~~~~~~di~i~~g~I~~Ig~~l~~~~~~~iiD~~g~~v~PG~ID~HVH~repg~--~~ke~~~tgs~ 78 (430)
T COG0044 1 MDLLIKNARVVDPGEDEVADILIKDGKIAAIGKNLEPTSGAEIIDAKGLLVLPGLVDLHVHFREPGF--EHKETFETGSR 78 (430)
T ss_pred CcEEEeccEEEcCCCceEecEEEECCEEEEeccCCCCCCCCcEEECCCCEEccCeeEEEEecCCCCc--chhhhHHHHHH
Confidence 4789999999999788899999999999999987654467899999999999999999999998854 56788999999
Q ss_pred HHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCc
Q psy10113 99 AAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLY 178 (596)
Q Consensus 99 ~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~ 178 (596)
+|++||+|||+||..+.+.....++++.+...+..++.++|+++.+++.+.....+.++... +.+++.||++.. .
T Consensus 79 AAa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~it~~~~~~~~~~~~~~----~~g~~~F~~~~~-~ 153 (430)
T COG0044 79 AAAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSVVDYAFYGGLTKGNLGKLELTERGV----EAGFKGFMDDST-G 153 (430)
T ss_pred HHHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccceeEEEEEEEEeccccchhhhhhhhh----ccceEEEecCCc-C
Confidence 99999999999999998888899999999999998999999999999998877554444332 567799998654 4
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEe
Q psy10113 179 MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVH 258 (596)
Q Consensus 179 ~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~h 258 (596)
......+++.++.+.++|.++.+|+|+.+++. ..+...|...++.|...+|...|..++.|.+.+|+.+++++|++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~~---~~~~~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~g~~vhi~H 230 (430)
T COG0044 154 ALDDDVLEEALEYAAELGALILVHAEDDDLIA---EGVMNEGLRAPELGLAGRPPIAEASAIARDLELARATGARVHICH 230 (430)
T ss_pred cCCHHHHHHHHHHHHhcCCeEEEecCChhHhh---hHHHhcCccchhhccCCCChHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 57899999999999999999999999988766 556788999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEE
Q psy10113 259 IMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTT 338 (596)
Q Consensus 259 v~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~ 338 (596)
+++++++++++.++.. |+ .|++|++++||.++..++.. .+..++++||||. .+++++||+.|.+|.+.++
T Consensus 231 iSt~~sv~li~~ak~~----g~--~vt~EvtphHL~l~~~~~~~---~~~~~k~nPPLR~-~~dr~aL~~~l~~G~ID~i 300 (430)
T COG0044 231 ISTKESVELIRAAKAE----GI--RVTAEVTPHHLLLDEEDIED---LGTLAKVNPPLRD-EEDREALWEALKDGVIDVI 300 (430)
T ss_pred cCCHHHHHHHHHHhhc----CC--ceEEeecchheEccHhHhhc---cCcceEECCCCCC-HHHHHHHHHHHhCCCCcEE
Confidence 9999999999999999 99 99999999999999987765 4567789999998 8999999999999999999
Q ss_pred eCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccE
Q psy10113 339 GSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADI 418 (596)
Q Consensus 339 gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADl 418 (596)
+|||+|++..+|.. .|...|+|+.|+|..++++|+ +|+.+.++++++++++|+||||+|||++ +|.|++|++|||
T Consensus 301 asDHaPht~eeK~~---~f~~ap~G~~glE~~lpl~l~-lv~~g~lsl~~~v~~~S~nPA~ifgl~~-~g~i~~G~~ADl 375 (430)
T COG0044 301 ASDHAPHTLEEKRL---PFEEAPSGIPGLETALPLLLT-LVKKGRLSLERLVELLSTNPARIFGLPP-KGAIEEGADADL 375 (430)
T ss_pred EcCCCCCCHHHhcc---chhhCCCCCccHHHHHHHHHH-HHHcCCcCHHHHHHHHhhCHHHHhCCCC-CCcccCCCccCE
Confidence 99999999999974 499999999999999999999 9999999999999999999999999965 899999999999
Q ss_pred EEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeec
Q psy10113 419 VVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVA 471 (596)
Q Consensus 419 Vi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~ 471 (596)
+|||++..++++.+++++...++||+|+++.|.|.+||++|++||++|+....
T Consensus 376 ~lvD~~~~~~i~~~~~~sk~~~sPf~G~~~~g~v~~Ti~rG~~v~~~~~~~~~ 428 (430)
T COG0044 376 VLVDPDEEWTIRAEELYSKAKNSPFEGFELKGRVVATILRGKVVYEDGEVIAK 428 (430)
T ss_pred EEEcCCCCeEEchhhhccccCCCCcCCCEEeeeEEEEEECCEEEEECCcEecC
Confidence 99999999999999999999999999999999999999999999999986543
No 5
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=100.00 E-value=3.2e-65 Score=557.09 Aligned_cols=453 Identities=48% Similarity=0.784 Sum_probs=404.6
Q ss_pred EEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHHHH
Q psy10113 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAA 100 (596)
Q Consensus 21 llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~a 100 (596)
++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|||||||+|+|+.+++.+....++++.+++++
T Consensus 1 ~li~n~~vv~~~~~~~~~V~I~dg~I~~Ig~~~~~~~~~~vIDa~G~~vlPGlID~H~H~~~~~~~~~~~e~~~~~s~~a 80 (454)
T TIGR02033 1 KLIRGGTVVNADDVFQADVLIEGGKIVAVGRNLSPPDAVEEIDATGKYVMPGGIDVHTHLEMPFGGTVTADDFFTGTKAA 80 (454)
T ss_pred CEEECcEEEcCCCceEEEEEEECCEEEEecCCCCCCCCCcEEECCCCEEecCEecceeccCcccCCCCCcchHHHHHHHH
Confidence 57999999998777789999999999999975433345689999999999999999999988765567889999999999
Q ss_pred HhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccC
Q psy10113 101 VAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYML 180 (596)
Q Consensus 101 l~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~ 180 (596)
+++||||++|+..+.+.....++++...........+++++|...+.+..+..+++..+..+.|+..+|+|++++..+.+
T Consensus 81 ~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 160 (454)
T TIGR02033 81 AAGGTTTIIDFALPHKGESLTEALETWHEKAEGKSVIDYGFHMMITHWNDEVLEEHIPELVEEGITSFKVFMAYKNLLMV 160 (454)
T ss_pred HhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhccCceEEEEEEecccCCcHHHHHHHHHHHHhcCCcEEEEEeecCCCCCC
Confidence 99999999999876665567788887777766667889998887766666656664444555799999999998887889
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 181 SDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 181 ~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
++++++++++.|+++|.++.+|+|+........+++.+.|...+.+|...+|++.|.+++.+++.++...++++|++|++
T Consensus 161 ~~~~l~~~~~~a~~~~~~v~~H~E~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~~v~~~~~~~~~~~~~~~i~H~s 240 (454)
T TIGR02033 161 DDEELFEILKRAKELGALLQVHAENGDVIAELQARLLAQGKTGPEYHALSRPPESEAEAVARAIALAALANAPLYVVHVS 240 (454)
T ss_pred CHHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHHHHHcCCCChhHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 99999999999999999999999988777777788888999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeC
Q psy10113 261 SKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGS 340 (596)
Q Consensus 261 s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gs 340 (596)
+..+.+.|+.+++. |+ .+++|+++++|.+++.++..++.+...+.++||+|. ..++++||+++.+|.++++||
T Consensus 241 ~~~~~~~i~~~~~~----g~--~vt~e~~p~~l~~~~~~~~~~~~~~~~~~~~pPlr~-~~~~~~l~~~l~~G~i~~igt 313 (454)
T TIGR02033 241 TASAVDEIAEAREK----GQ--PVYGETCPQYLLLDDTIYDKPGFEGAKYVCSPPLRE-KEDQDALWSALSSGALQTVGS 313 (454)
T ss_pred CHHHHHHHHHHHHC----CC--eEEEEcCchheeecHHHhcCcccccceeEECCCCCC-hhhHHHHHHHhhcCCeEEEEC
Confidence 99999999999988 99 999999999999999988654445567789999997 788999999999999999999
Q ss_pred CCCCCChhhh-hhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEE
Q psy10113 341 DNCTFNKNQK-ELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIV 419 (596)
Q Consensus 341 D~~~~~~~~~-~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlV 419 (596)
||++++...+ ..+.++|...|+|++|+|.+++.+|++++..+.++++++++++|.|||++||+++++|+|++|++||||
T Consensus 314 Dh~p~~~~~k~~~~~~~~~~~~~G~~g~e~~l~~l~~~~v~~~~~~~~~~~~~~t~~pa~~~gl~~~~G~l~~G~~AD~~ 393 (454)
T TIGR02033 314 DHCPFNFAQKKAIGKDDFTKIPNGGPGVEERMTLLFDEGVATGRITLEKFVELTSTNPAKIFNMYPRKGTIAVGSDADIV 393 (454)
T ss_pred CCCCCCHHHhhhcccCCHhhCCCCCchHHhHHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHcCCCCCCCccccCCcCCEE
Confidence 9999998776 344568999999999999999999999998889999999999999999999998889999999999999
Q ss_pred EEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecC
Q psy10113 420 VWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPT 480 (596)
Q Consensus 420 i~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~ 480 (596)
|+|++..+.++.+.+++...|+||+|+.+.|+|..||++|++||+||++....|.|+|+++
T Consensus 394 i~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~~~g~~~~~ 454 (454)
T TIGR02033 394 IWDPNRTTVISAETHHDNADYNPFEGFKVQGAVVSVLSRGRVVVEDGQFVGTAGSGRFIKR 454 (454)
T ss_pred EEcCCcCeeechHHhhccCCCCcccCeEEeeeEEEEEECCEEEEECCEEecCCCCcceecC
Confidence 9999999999999889999999999999999999999999999999999887889999974
No 6
>PRK08323 phenylhydantoinase; Validated
Probab=100.00 E-value=2.4e-64 Score=550.74 Aligned_cols=453 Identities=47% Similarity=0.759 Sum_probs=409.9
Q ss_pred ccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHH
Q psy10113 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTK 98 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~ 98 (596)
|+++|+|++|++++...+++|+|+||+|++|++. .+.++||++|++|+|||||+|+|+.+++.+....++++++++
T Consensus 1 ~d~li~n~~v~~~~~~~~~~v~I~~g~I~~i~~~----~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~ 76 (459)
T PRK08323 1 MSTLIKNGTVVTADDTYKADVLIEDGKIAAIGAN----LGDEVIDATGKYVMPGGIDPHTHMEMPFGGTVSSDDFETGTR 76 (459)
T ss_pred CcEEEECCEEEcCCCceEEEEEEECCEEEEEecC----CCceEEECCCCEEeccEEeeeeccccccCCccccCcHHHHHH
Confidence 4789999999998877789999999999999875 256899999999999999999999887665667899999999
Q ss_pred HHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCc
Q psy10113 99 AAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLY 178 (596)
Q Consensus 99 ~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~ 178 (596)
+++++||||++|+..+.+.....++++...........++++++.....+..+..+++.++++ .|+..+|.++++++.+
T Consensus 77 ~a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~ 155 (459)
T PRK08323 77 AAACGGTTTIIDFALQPKGQSLREALEAWHGKAAGKAVIDYGFHMIITDWNEVVLDEMPELVE-EGITSFKLFMAYKGAL 155 (459)
T ss_pred HHHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhccCceEEEEEEEEecCCcHHHHHHHHHHHH-cCCCEEEEEEecCCCC
Confidence 999999999999987666667778888877776667889999887666566666778888874 6899999999988778
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEe
Q psy10113 179 MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVH 258 (596)
Q Consensus 179 ~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~h 258 (596)
.++++++.++++.|+++|.++.+|+|+...+....+++.+.|...++.|...+|.+.|..++.+++.++...++++|++|
T Consensus 156 ~~s~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~~~~~~i~H 235 (459)
T PRK08323 156 MLDDDELLRALQRAAELGALPMVHAENGDAIAYLQAKLLAEGKTGPEYHALSRPPEVEGEATNRAIMLAELAGAPLYIVH 235 (459)
T ss_pred CCCHHHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCChhhhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 89999999999999999999999999888777777788888999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCc-cccccccccCCCCCCCCCcHHHHHHHHhcCCccE
Q psy10113 259 IMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCT-WHDQAAHVLSPPLRPDETTPTHLLTLLNENALQT 337 (596)
Q Consensus 259 v~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~-~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~ 337 (596)
+++.+..+.|+.+|++ |+ .+++|++++||.++.+.+... |..+..+.++||+|. .++.++||+++++|.+++
T Consensus 236 ~s~~~~~~~i~~ak~~----g~--~vt~e~~p~~l~l~~~~~~~~~~~~g~~~k~~pPlr~-~~~~~~l~~~l~~G~i~~ 308 (459)
T PRK08323 236 VSCKEALEAIRRARAR----GQ--RVFGETCPQYLLLDESEYDGPDWFEGAKYVMSPPLRD-KEHQDALWRGLQDGDLQV 308 (459)
T ss_pred CCCHHHHHHHHHHHHC----CC--eEEEEcCccceeecHHHhcCCccccccceEECCCCCC-hHHHHHHHHHhhcCCeeE
Confidence 9999999999999998 99 999999999999998877543 444566789999997 788999999999999999
Q ss_pred EeCCCCCCChhhhh-hCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCc
Q psy10113 338 TGSDNCTFNKNQKE-LGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDA 416 (596)
Q Consensus 338 ~gsD~~~~~~~~~~-~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~A 416 (596)
++|||+|++...+. .+.++|...|.|++|+|.+++.+|++++..+.++++++++++|.|||++||+++++|+|++|++|
T Consensus 309 i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~t~~pA~~lgl~~~~G~l~~G~~A 388 (459)
T PRK08323 309 VATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSEGVMTGRITLNRFVELTSTNPAKIFGLYPRKGTIAVGADA 388 (459)
T ss_pred EECCCCCCChHHhcccccCCHhhCCCCcchHhhhHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHhCCCCCCcccCCCCcC
Confidence 99999999988876 46678999999999999999999988888889999999999999999999998889999999999
Q ss_pred cEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecCCCC
Q psy10113 417 DIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTN 483 (596)
Q Consensus 417 DlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~~~~ 483 (596)
||||+|++..++++.+.+++...|+||+|+++.|.|..||++|++||++|++....|.|+|++++.|
T Consensus 389 Dlvi~d~~~~~~v~~~~~~s~~~~s~~~g~~~~g~v~~viv~G~~v~~~g~~~~~~~~G~~~~~~~~ 455 (459)
T PRK08323 389 DIVIWDPNATKTISASTLHSNVDYNPYEGFEVTGWPVTTLSRGEVVVEDGEFRGKAGHGRFLKRKPF 455 (459)
T ss_pred CEEEEcCCcccccCHHHHhhcCCCCcccCcEEeeeEEEEEECCEEEEECCEEeccCCCceEeeCCCC
Confidence 9999999999999999999999999999999999999999999999999999888889999998766
No 7
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=100.00 E-value=2.6e-64 Score=548.49 Aligned_cols=447 Identities=53% Similarity=0.868 Sum_probs=401.8
Q ss_pred EEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHHHH
Q psy10113 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAA 100 (596)
Q Consensus 21 llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~a 100 (596)
++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|||||||+|+|+.+++......++++.+++++
T Consensus 1 lli~~~~v~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~~~viD~~g~~vlPGlID~H~H~~~~~~~~~~~e~~~~~~~~a 80 (447)
T cd01314 1 LIIKNGTIVTADGSFKADILIEDGKIVAIGPNLEAPGGVEVIDATGKYVLPGGIDPHTHLELPFMGTVTADDFESGTRAA 80 (447)
T ss_pred CEEECCEEECCCCceeeeEEEECCEEEEeeCCCCCCCCceEEECCCCEEecCEEeccccccccccCccCcchHHHHHHHH
Confidence 57999999998877789999999999999976443335789999999999999999999987765556789999999999
Q ss_pred HhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccC
Q psy10113 101 VAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYML 180 (596)
Q Consensus 101 l~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~ 180 (596)
+++||||++|+..+.+.....++++.....+.....++++++.....+.....++++.+++ .|+..+|.|++++..+.+
T Consensus 81 ~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~-~g~~~ik~~~~~~~~~~~ 159 (447)
T cd01314 81 AAGGTTTIIDFAIPNKGQSLLEAVEKWRGKADGKSVIDYGFHMIITDWTDSVIEELPELVK-KGISSFKVFMAYKGLLMV 159 (447)
T ss_pred HhCCCcEEEeCCCCCCCCCHHHHHHHHHHHhcCCCcccEEEEEeecCCChHHHHHHHHHHH-cCCCEEEEEeccCCCCCC
Confidence 9999999999986655567888888887777666788888887766556666778888876 689999999998888888
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 181 SDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 181 ~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
+++++.++++.++++|.++.+|+|+...+....++....|...++.|...+|.+.|..++.+.+.+++..++++|++|++
T Consensus 160 s~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~~~~~H~s 239 (447)
T cd01314 160 DDEELLDVLKRAKELGALVMVHAENGDVIAELQKKLLAQGKTGPEYHALSRPPEVEAEATARAIRLAELAGAPLYIVHVS 239 (447)
T ss_pred CHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHcCCCChHHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 99999999999999999999999988877777777778899999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeC
Q psy10113 261 SKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGS 340 (596)
Q Consensus 261 s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gs 340 (596)
+..+.+.|+.+++. |. .+++|+|+++|.++..++...+..+..+.++||+|. ..++++||+++++|+++++||
T Consensus 240 ~~~~~~~i~~~k~~----g~--~v~~~~~ph~l~~~~~~~~~~~~~g~~~~~~pplr~-~~~~~~l~~~l~~G~i~~igs 312 (447)
T cd01314 240 SKEAADEIARARKK----GL--PVYGETCPQYLLLDDSDYWKDWFEGAKYVCSPPLRP-KEDQEALWDGLSSGTLQTVGS 312 (447)
T ss_pred CHHHHHHHHHHHHC----CC--eEEEecCchhheeCHHHhccccccccceEECCCCCC-hHHHHHHHHHHhCCCeeEEEC
Confidence 99999999999988 99 999999999999999887533334556788999998 578999999999999999999
Q ss_pred CCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEE
Q psy10113 341 DNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVV 420 (596)
Q Consensus 341 D~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi 420 (596)
||++++...++...++|...|+|++|+|++++.+|++++..+.++++++++++|.|||++||+++++|+|++|++|||||
T Consensus 313 Dh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~~~~~~~~~~~~~~~t~~pA~~~gl~~~~G~l~~G~~AD~vi 392 (447)
T cd01314 313 DHCPFNFAQKARGKDDFTKIPNGVPGVETRMPLLWSEGVAKGRITLEKFVELTSTNPAKIFGLYPRKGTIAVGSDADLVI 392 (447)
T ss_pred CCCCCCHHHhhcccCCHhhCCCCCchHhhhHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHhCCCCCCCccCCCCcCCEEE
Confidence 99999999888766789999999999999999999999888899999999999999999999999999999999999999
Q ss_pred EcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCC
Q psy10113 421 WNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQG 475 (596)
Q Consensus 421 ~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g 475 (596)
||++..++++.+.+++...++||+|+++.|+|..||++|++||+||++...+|.|
T Consensus 393 ~d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~t~v~G~~v~~~~~~~~~~~~g 447 (447)
T cd01314 393 WDPNAEKTISADTHHHNVDYNIFEGMKVKGWPVVTISRGKVVVEDGELVGEKGSG 447 (447)
T ss_pred EeCCcCEEecHHHhhccCCCCcccCeEEeeeEEEEEECCEEEEECCEEeccCCCC
Confidence 9999999999998999999999999999999999999999999999998877765
No 8
>PLN02795 allantoinase
Probab=100.00 E-value=7.2e-63 Score=540.08 Aligned_cols=445 Identities=24% Similarity=0.318 Sum_probs=385.5
Q ss_pred ccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCC---CCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHH
Q psy10113 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVP---GGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYH 95 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~---~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~ 95 (596)
.+++|+|++|++++....++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+..+. ....+++.+
T Consensus 44 ~~~vi~~~~vv~~~~~~~~~v~i~dG~I~~I~~~~~~~~~~~~~~~ida~G~~v~PG~ID~H~H~~~~~--~~~~e~~~~ 121 (505)
T PLN02795 44 PHFVLYSKRVVTPAGVIPGAVEVEGGRIVSVTKEEEAPKSQKKPHVLDYGNAVVMPGLIDVHVHLNEPG--RTEWEGFPT 121 (505)
T ss_pred cceEEECCEEEECCCeEEEEEEEECCEEEEecCccccccccCCCEEEECCCCEEecCEEecccCcCCCC--ccchhHHHH
Confidence 58999999999988777899999999999999754322 2568999999999999999999997653 235689999
Q ss_pred HHHHHHhCCceEEecccc-CCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeec
Q psy10113 96 GTKAAVAGGTTTIIDFAL-PRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAY 174 (596)
Q Consensus 96 g~~~al~~GtTti~D~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~ 174 (596)
++++++++||||++||.. ..+.....++++...+.+.....++++++.+.........+++.++. +.|+.+||.||.+
T Consensus 122 ~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~l~~~~-~~G~~g~k~f~~~ 200 (505)
T PLN02795 122 GTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAKGKLYVDVGFWGGLVPENAHNASVLEELL-DAGALGLKSFMCP 200 (505)
T ss_pred HHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHHhccCceeeeeceecccCcchhHHHHHHHHH-HCCCcEEEEEecc
Confidence 999999999999999973 34555667777777777766788999988766554445566777765 4699899999976
Q ss_pred CCCc---cCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhccc-
Q psy10113 175 KGLY---MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQV- 250 (596)
Q Consensus 175 ~~~~---~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~- 250 (596)
++.. ..+++.+.++++.++++|.++.+|+|+.+++... .....|...+..+..++|+..|.+++.+.+.+++..
T Consensus 201 ~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~--~~~~~~~~~~~~~~~~rP~~aE~~ai~~~~~la~~~~ 278 (505)
T PLN02795 201 SGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVESD--SRLDADPRSYSTYLKSRPPSWEQEAIRQLLEVAKDTR 278 (505)
T ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEecCChhHhhhh--hhhhcCCcChhHhcccCCHHHHHHHHHHHHHHHHHhh
Confidence 5543 5688999999999999999999999998866422 133556667777788999999999999999999999
Q ss_pred ------CCCeEEEecCcH-HHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcH
Q psy10113 251 ------DCPLYVVHIMSK-AAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTP 323 (596)
Q Consensus 251 ------~~p~~i~hv~s~-~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~ 323 (596)
++++|++|+++. ++.++|+.+|++ |+ .|++|+|++||.++..++.. ....+.++||+|. .+++
T Consensus 279 ~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~----G~--~Vt~Ev~ph~L~l~~~~~~~---~~~~~k~~PPLR~-~~d~ 348 (505)
T PLN02795 279 PGGVAEGAHVHIVHLSDAESSLELIKEAKAK----GD--SVTVETCPHYLAFSAEEIPD---GDTRYKCAPPIRD-AANR 348 (505)
T ss_pred hcccCCCCCEEEEECCChHHHHHHHHHHHHC----CC--cEEEEeChhhhcccHHHccC---CCCceEEcCCCCC-hHHH
Confidence 999999999999 999999999999 99 99999999999999887743 3456789999998 6899
Q ss_pred HHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCC
Q psy10113 324 THLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNL 403 (596)
Q Consensus 324 ~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl 403 (596)
++||++|..|.+.+++|||+|++..+|..+..+|+..|+|++|+|..++++|+.++ .++++++++++++|.|||++||+
T Consensus 349 ~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~~~~~~~~-~~~l~l~~~v~~~s~~pA~~~gl 427 (505)
T PLN02795 349 ELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPATWTAGR-AYGLTLEQLARWWSERPAKLAGL 427 (505)
T ss_pred HHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhCCCCceeHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999987777899999999999999999998776 55699999999999999999999
Q ss_pred CCCcccccCCCCccEEEEcCCcceeecCCC-ccCCCC-CCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecCC
Q psy10113 404 YPKKGVIAEGSDADIVVWNYKAKRTISAKT-HAHACD-YNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTH 481 (596)
Q Consensus 404 ~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~-~~~~~~-~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~~ 481 (596)
+++|+|++|++|||||||++..++++.+. .++... ++||+|+++.|+|..||++|++||++|+++ .++.|+|++.+
T Consensus 428 -~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~~s~~~~~sp~~G~~l~g~v~~tiv~G~~v~~~g~~~-~~~~G~~~~~~ 505 (505)
T PLN02795 428 -DSKGAIAPGKDADIVVWDPEAEFVLDESYPIYHKHKSLSPYLGTKLSGKVIATFVRGNLVFLEGKHA-KQACGSPILAK 505 (505)
T ss_pred -CCCCccCCCCccCEEEEcCCcceEECcchhhhhcCCCcCCCCCeEEEeEEEEEEECCEEEEECCeEc-CCCCCeEecCC
Confidence 78999999999999999999999999875 566775 999999999999999999999999999987 56789998753
No 9
>PRK08044 allantoinase; Provisional
Probab=100.00 E-value=2.3e-62 Score=530.60 Aligned_cols=439 Identities=26% Similarity=0.322 Sum_probs=391.2
Q ss_pred ccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHH
Q psy10113 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTK 98 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~ 98 (596)
++++|+|++|++++....++|+|+||+|++|++... .+.++||++|++|+|||||+|+|+..+.. ...+++.++++
T Consensus 3 ~~~~i~n~~vi~~~~~~~~~i~I~dg~I~~i~~~~~--~~~~~iD~~G~~v~Pg~iD~h~h~~~~~~--~~~e~~~~~~~ 78 (449)
T PRK08044 3 FDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLG--DAKEVMDASGLVVSPGMVDAHTHISEPGR--SHWEGYETGTR 78 (449)
T ss_pred ceEEEECcEEEcCCCCEEEEEEEECCEEEEecCCCC--CCCeEEECCCCEEcCCeeccccccCCCCc--cccccHHHHHH
Confidence 579999999998777677999999999999987542 36689999999999999999999977653 33788999999
Q ss_pred HHHhCCceEEecccc-CCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCC
Q psy10113 99 AAVAGGTTTIIDFAL-PRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGL 177 (596)
Q Consensus 99 ~al~~GtTti~D~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~ 177 (596)
+++++||||++|+.. ..+.....+.++...+.+..++++||.++.+++.. ...++..+.+ .|+.+||+||.|++.
T Consensus 79 aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~vd~~~~~~~~~~---~~~ei~~l~~-~gv~~fk~~~~~~~~ 154 (449)
T PRK08044 79 AAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSY---NLDRLHELDE-VGVVGFKCFVATCGD 154 (449)
T ss_pred HHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCeeeEEEEeeeCCC---CHHHHHHHHH-cCceEEEEEecccCc
Confidence 999999999999973 33556677888888888888899999988877644 3566777754 599999999987431
Q ss_pred -------ccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhccc
Q psy10113 178 -------YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQV 250 (596)
Q Consensus 178 -------~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~ 250 (596)
...++..+++.++.++++|.++.+|+|+..++....+.+...|.+.++.|..++|...|.+++.+.+.+|+..
T Consensus 155 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~~~ 234 (449)
T PRK08044 155 RGIDNDFRDVNDWQFYKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVA 234 (449)
T ss_pred ccccCCccCcCHHHHHHHHHHHHhcCCEEEEecCCHHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHh
Confidence 2357788999999999999999999999998877677788899999999999999999999999999999999
Q ss_pred CCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHH
Q psy10113 251 DCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLL 330 (596)
Q Consensus 251 ~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l 330 (596)
++++|+.|+++..+.+.++++++. |. .+++|+|+++|.++..++.. .+..+.++||+|. ..++++||++|
T Consensus 235 g~~vhi~HiSt~~~~~~i~~ak~~----G~--~it~e~~~h~L~l~~~~~~~---~~~~~k~~PPlr~-~~d~~aL~~~l 304 (449)
T PRK08044 235 GCRLHVCHISSPEGVEEVTRARQE----GQ--DVTCESCPHYFVLDTDQFEE---IGTLAKCSPPIRD-LENQKGMWEKL 304 (449)
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHC----CC--CEEEEcChhhhcccHHHhhC---CCCcEEEcCCCCC-hHHHHHHHHHH
Confidence 999999999999999999999988 99 99999999999999988753 2456779999998 67899999999
Q ss_pred hcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccc
Q psy10113 331 NENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVI 410 (596)
Q Consensus 331 ~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I 410 (596)
..|.+++++|||+|++...|. .+|...|.|++|+|..|+.++..++..++++++++++++|.||||+||+ +++|+|
T Consensus 305 ~~G~id~i~sDH~P~~~~~K~---~~~~~~~~g~~g~e~~l~~~~~~~v~~~~l~~~~~v~~~s~npA~~lgl-~~~G~i 380 (449)
T PRK08044 305 FNGEIDCLVSDHSPCPPEMKA---GNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGL-QQKGRI 380 (449)
T ss_pred hCCCceEEEcCCCCCChHHcc---CChhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCC-CCCCcC
Confidence 999999999999999877775 3799999999999999999999999999999999999999999999999 568999
Q ss_pred cCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeec
Q psy10113 411 AEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLP 479 (596)
Q Consensus 411 ~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~ 479 (596)
++|++|||||||++..++++.+.+++...|+||+|++++|+|..||++|++||++|+....++.|+||+
T Consensus 381 ~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~t~~~G~~v~~~~~~~~~~~~G~~~~ 449 (449)
T PRK08044 381 APGKDADFVFIQPNSSYVLKNEDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFIL 449 (449)
T ss_pred CCCCccCEEEECCCCcEEECHHHccccCCCCCCCCCEEeeeEEEEEECCEEEEECCccccCCCCcccCC
Confidence 999999999999999999999999999999999999999999999999999999998766778999874
No 10
>PRK06189 allantoinase; Provisional
Probab=100.00 E-value=6.1e-62 Score=528.95 Aligned_cols=443 Identities=29% Similarity=0.374 Sum_probs=389.1
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHH
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGT 97 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~ 97 (596)
+++++|+|++|++++....++|+|+||+|++|++.... .+.++||++|++|+|||||+|+|+..+. ....+++.+++
T Consensus 2 ~~~~~i~~~~v~~~~~~~~~~v~i~~G~I~~i~~~~~~-~~~~~iD~~g~~vlPG~ID~H~H~~~~~--~~~~~~~~~~~ 78 (451)
T PRK06189 2 MYDLIIRGGKVVTPEGVYRADIGIKNGKIAEIAPEISS-PAREIIDADGLYVFPGMIDVHVHFNEPG--RTHWEGFATGS 78 (451)
T ss_pred CccEEEECCEEEcCCCcEEEEEEEECCEEEEecCCCCC-CCCeEEECCCCEEecCEEEeeeccCCCC--CCCcccHHHHH
Confidence 36899999999998887889999999999999976532 3578999999999999999999997653 34678999999
Q ss_pred HHHHhCCceEEeccc-cCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCC
Q psy10113 98 KAAVAGGTTTIIDFA-LPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKG 176 (596)
Q Consensus 98 ~~al~~GtTti~D~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~ 176 (596)
++++++|+||++++. ...+.....+.+....+.+...+.+||+++......+ .+++..++ +.|+.+||+||.+.+
T Consensus 79 ~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~l~~l~-~~Gv~~~k~f~~~~~ 154 (451)
T PRK06189 79 AALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFALWGGLVPGN---LEHLRELA-EAGVIGFKAFMSNSG 154 (451)
T ss_pred HHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCceEeEEEEecccccC---HHHHHHHH-HcCCcEEEEEccccC
Confidence 999999999999986 2234445566777777777778899999986554332 55777775 469999999986533
Q ss_pred ---CccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCC
Q psy10113 177 ---LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCP 253 (596)
Q Consensus 177 ---~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p 253 (596)
....++..++++++.+++++..+.+|+|+.+++......+...|...++.+...+|...|.+++.+++.++++.++|
T Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~P~~~E~~~v~~~l~la~~~g~~ 234 (451)
T PRK06189 155 TDEFRSSDDLTLYEGMKEIAALGKILALHAESDALTRHLTTQARQQGKTDVRDYLESRPVVAELEAVQRALLYAQETGCP 234 (451)
T ss_pred CCCcCcCCHHHHHHHHHHHHhcCCeEEEECCChHHHHHHHHHHHhcCCCChhHccccCCHHHHHHHHHHHHHHHHHhCCC
Confidence 23457788999999999999999999999988777777788899999999999999999999999999999999999
Q ss_pred eEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcC
Q psy10113 254 LYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNEN 333 (596)
Q Consensus 254 ~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G 333 (596)
+|++|+++.++.++|+.++.. |+ .+++|+|+++|.++..++.. .+..+.++||+|. .+++++||++++.|
T Consensus 235 ~hi~HiSt~~~~~~i~~~k~~----g~--~vt~ev~ph~L~l~~~~~~~---~~~~~~~~Pplr~-~~~~~~L~~~l~~G 304 (451)
T PRK06189 235 LHFVHISSGKAVALIAEAKKR----GV--DVSVETCPHYLLFTEEDFER---IGAVAKCAPPLRS-RSQKEELWRGLLAG 304 (451)
T ss_pred EEEEECCCHHHHHHHHHHHHC----CC--cEEEEeCHHHhhcCHhHhhC---cCCceEEeCCCCC-hhhHHHHHHHHhCC
Confidence 999999999999999999998 99 99999999999999877643 2346678999998 68899999999999
Q ss_pred CccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCC
Q psy10113 334 ALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEG 413 (596)
Q Consensus 334 ~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G 413 (596)
.+++++|||+|++...|. ..+|...|+|++|+|..++++|+.++..++++++++++++|.|||++||+ +++|+|++|
T Consensus 305 ~i~~i~sDh~p~~~~~K~--~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~npA~~lgl-~~~G~l~~G 381 (451)
T PRK06189 305 EIDMISSDHSPCPPELKE--GDDFFLVWGGISGGQSTLLVMLTEGYIERGIPLETIARLLATNPAKRFGL-PQKGRLEVG 381 (451)
T ss_pred CceEEECCCCCCCHHHcC--cCCcccCCCCceeHHHHHHHHHHHHHhcCCCCHHHHHHHHhhhHHHHhCC-CCCCcccCC
Confidence 999999999999887774 24799999999999999999999888888999999999999999999999 678999999
Q ss_pred CCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecCC
Q psy10113 414 SDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTH 481 (596)
Q Consensus 414 ~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~~ 481 (596)
++|||||||++..++++.+.+++...++||+|+++.|+|.+||++|++||+||++. ..+.|+|++++
T Consensus 382 ~~ADlvi~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~tiv~G~~v~~~g~~~-~~~~G~~~~~~ 448 (451)
T PRK06189 382 ADADFVLVDLDETYTLTKEDLFYRHKQSPYEGRTFPGRVVATYLRGQCVYQDGEVF-PPPRGQLLRPS 448 (451)
T ss_pred CcCCEEEEcCCCCEEECHHHhhhcCCCCCcCCcEEEeEEEEEEECCEEEEECCEEc-cCCCCcEecCC
Confidence 99999999999999999988888899999999999999999999999999999986 45699999984
No 11
>PRK07369 dihydroorotase; Provisional
Probab=100.00 E-value=5.5e-62 Score=521.70 Aligned_cols=414 Identities=19% Similarity=0.242 Sum_probs=366.0
Q ss_pred cccEEEEccEEEcCCC--ceeeeEEEECCeEEEeccCCCC-CCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHH
Q psy10113 18 QNRLLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIV-PGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFY 94 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~--~~~~dV~IedG~I~~Ig~~~~~-~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~ 94 (596)
|.+++|+|++|+++.. ...++|+|+||+|++|+++... +.+.++||++|++|+|||||+|+|+..+ +....+++.
T Consensus 1 ~~~~~i~n~~v~d~~~~~~~~~~v~I~dg~I~~i~~~~~~~~~~~~~iDa~G~~vlPG~ID~H~H~~~~--~~~~~e~~~ 78 (418)
T PRK07369 1 MSNELLQQVRVLDPVSNTDRIADVLIEDGKIQAIEPHIDPIPPDTQIIDASGLILGPGLVDLYSHSGEP--GFEERETLA 78 (418)
T ss_pred CCCEEEeCeEEECCCCCcccceeEEEECCEEEEecCCcccCCCCCEEEECCCCEEecCEEecccccCCC--CcCCCccHH
Confidence 4579999999998543 3579999999999999976532 3467999999999999999999999776 345679999
Q ss_pred HHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCCh-hHHHHHHHHHHHcCCCEEEEEee
Q psy10113 95 HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSD-QVQQEMAELCEKHGVNSFKTFMA 173 (596)
Q Consensus 95 ~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~lv~~~Gv~~~k~~~~ 173 (596)
+++++|++|||||++|+....+.....+.++.+++.+...+++||.++..++.+.. ...+++.++. +.|+.+|+.
T Consensus 79 s~~~aa~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~ei~~l~-~~Gv~~f~~--- 154 (418)
T PRK07369 79 SLAAAAAAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPPVQLHFWGALTLGGQGKQLTELAELA-AAGVVGFTD--- 154 (418)
T ss_pred HHHHHHHhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCceeEEEEEEEeeCCCCccHhhHHHHH-HCCCEEEEC---
Confidence 99999999999999999877677778889999999988888999999998876543 4577888885 469998872
Q ss_pred cCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCC
Q psy10113 174 YKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCP 253 (596)
Q Consensus 174 ~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p 253 (596)
+....+...++++++.++++|.++.+|+|+..++. ..+...|...+..+..++|+..|.+++.+++.+|+..+||
T Consensus 155 --~~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l~~---~~~~~~g~~~~~~~~~~~p~~aE~~av~r~~~la~~~~~~ 229 (418)
T PRK07369 155 --GQPLENLALLRRLLEYLKPLGKPVALWPCDRSLAG---NGVMREGLLALRLGLPGDPASAETTALAALLELVAAIGTP 229 (418)
T ss_pred --CCcCCCHHHHHHHHHHHHhcCCeEEEecCChhhhh---cCcccCChhHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCc
Confidence 22234566899999999999999999999988753 2245667777778888999999999999999999999999
Q ss_pred eEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcC
Q psy10113 254 LYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNEN 333 (596)
Q Consensus 254 ~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G 333 (596)
+|++|+++.+++++|+++|++ |+ .|++|+|++||.++..++.. .+..+.++||||. .+++++||++|++|
T Consensus 230 ~hi~HvSs~~~~~~i~~ak~~----g~--~vt~Ev~phhL~l~~~~~~~---~~~~~kv~PPLR~-~~d~~aL~~~l~~G 299 (418)
T PRK07369 230 VHLMRISTARSVELIAQAKAR----GL--PITASTTWMHLLLDTEALAS---YDPNLRLDPPLGN-PSDRQALIEGVRTG 299 (418)
T ss_pred EEEEeCCCHHHHHHHHHHHHc----CC--CeEEEecHHHHhccHHHHhc---cCCCcEECCCCCC-HHHHHHHHHHHhcC
Confidence 999999999999999999999 99 99999999999999988753 3456789999998 68999999999999
Q ss_pred CccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCC
Q psy10113 334 ALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEG 413 (596)
Q Consensus 334 ~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G 413 (596)
.+.+++|||+|++..+|.. +|+.+|+|++|++..|+.+|+.++..++++++++++++|.||||+||++ +|+|++|
T Consensus 300 ~Id~i~SDHaP~~~~~K~~---~~~~~~~G~~G~e~~l~~~~~~~v~~~~i~l~~~v~~~s~nPA~~lgl~--~G~i~~G 374 (418)
T PRK07369 300 VIDAIAIDHAPYTYEEKTV---AFAEAPPGAIGLELALPLLWQNLVETGELSALQLWQALSTNPARCLGQE--PPSLAPG 374 (418)
T ss_pred CCCEEEcCCCCCCHHHccC---CHhHCCCCceeHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCC--cCcccCC
Confidence 9999999999999988863 7999999999999999999999999999999999999999999999994 5999999
Q ss_pred CCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEE
Q psy10113 414 SDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIV 457 (596)
Q Consensus 414 ~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~ 457 (596)
++|||+++|++..++++.+.+++...|+||+|++++|+|..||+
T Consensus 375 ~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~t~~ 418 (418)
T PRK07369 375 QPAELILFDPQKTWTVSAQTLHSLSRNTPWLGQTLKGRVLQTWV 418 (418)
T ss_pred CcCCEEEEcCCCCEEECcccccCCCCCCCCCCCEeeeEEEEEEC
Confidence 99999999999999999999999999999999999999999985
No 12
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=100.00 E-value=6.6e-60 Score=512.42 Aligned_cols=438 Identities=27% Similarity=0.375 Sum_probs=383.9
Q ss_pred cEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHHH
Q psy10113 20 RLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKA 99 (596)
Q Consensus 20 ~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~ 99 (596)
+++|+|++|++++....++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+..+. ....+++.+++++
T Consensus 1 dl~i~~~~v~~~~~~~~~~v~i~dg~I~~i~~~~~-~~~~~~id~~g~~v~PG~ID~H~H~~~~~--~~~~~~~~~~~~~ 77 (443)
T TIGR03178 1 DLIIRGGRVILPNGEREADVGVKGGKIAAIGPDIL-GPAAKIIDAGGLVVFPGVVDTHVHINEPG--RTEWEGFETGTRA 77 (443)
T ss_pred CEEEECcEEECCCCceEEEEEEECCEEEEeeCCCC-CCCCeEEECCCCEEeccEeccccccCCCC--ccccchHHHHHHH
Confidence 58999999999887788999999999999997532 34678999999999999999999997653 3346889999999
Q ss_pred HHhCCceEEeccc-cCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCC-
Q psy10113 100 AVAGGTTTIIDFA-LPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGL- 177 (596)
Q Consensus 100 al~~GtTti~D~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~- 177 (596)
++++||||++|+. ...+.....+.+....+.+.....++++++.+... ...+++.++. +.|+.+||+||++.+.
T Consensus 78 ~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~i~~~~-~~G~~~ik~~~~~~~~~ 153 (443)
T TIGR03178 78 AAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFWGGLVP---YNLDDLRELD-EAGVVGFKAFLSPSGDD 153 (443)
T ss_pred HHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCceeEEEEeccCC---CCHHHHHHHH-HCCCcEEEEEecccCCC
Confidence 9999999999996 33444556667777777766677889988765443 3355677765 4699999999976433
Q ss_pred --ccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeE
Q psy10113 178 --YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLY 255 (596)
Q Consensus 178 --~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~ 255 (596)
...++++++++++.++++|.++.+|+|+.+++....+++...|.+.++.+...+|...|.+++.+.+.+++..++++|
T Consensus 154 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~ae~~~~~~~~~la~~~g~~vh 233 (443)
T TIGR03178 154 EFPHVDDWQLYKGMRELARLGQLLLVHAENPAITSALGEEAPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVTGCRVH 233 (443)
T ss_pred CcccCCHHHHHHHHHHHHhcCCeEEEeccChHHHHHHHHHHHhcCCCChhHhcCcCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 356789999999999999999999999998888888889999999999999999999999999999999999999999
Q ss_pred EEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCc
Q psy10113 256 VVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENAL 335 (596)
Q Consensus 256 i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~ 335 (596)
++|+++.++.++++.+++. |+ .+++|+++++|.++..++.. ....+.++||+|. ..++++||+++++|.+
T Consensus 234 i~Hiss~~~~~~i~~~~~~----g~--~it~e~~ph~l~l~~~~~~~---~~~~~~~~Pplr~-~~~~~~l~~~l~~G~i 303 (443)
T TIGR03178 234 VVHLSSAEAVELITEAKQE----GL--DVTVETCPHYLTLTAEEVPD---GGTLAKCAPPIRD-LANQEGLWEALLNGLI 303 (443)
T ss_pred EEeCCCHHHHHHHHHHHHC----CC--cEEEEECccceEecHHHhhC---cCcceEEcCCCCC-hHHHHHHHHHHHcCCc
Confidence 9999999999999999988 99 99999999999998877643 2455678999998 5788999999999999
Q ss_pred cEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCC
Q psy10113 336 QTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSD 415 (596)
Q Consensus 336 ~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ 415 (596)
.+++|||+|+....|. ..+|...|.|++|+|..|+.++..++..++++++++++++|.|||++||+ +++|+|++|++
T Consensus 304 ~~i~SDh~p~~~~~K~--~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~pA~~~g~-~~~G~l~~G~~ 380 (443)
T TIGR03178 304 DCVVSDHSPCTPDLKR--AGDFFKAWGGIAGLQSTLDVMFDEAVQKRGLPLEDIARLMATNPAKRFGL-AQKGRIAPGKD 380 (443)
T ss_pred cEEeCCCCCCChHHcC--cCChhhCCCCeeEHHHhHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHcCC-CCCCccCCCCc
Confidence 9999999999987764 34799999999999999999999888889999999999999999999999 77899999999
Q ss_pred ccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeee
Q psy10113 416 ADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYL 478 (596)
Q Consensus 416 ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~ 478 (596)
|||||||++..++++.+.+++...++||+|+++.|+|..||++|++||++|++.... .|+||
T Consensus 381 Ad~vi~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~-~g~~~ 442 (443)
T TIGR03178 381 ADFVFVDPDESYTLTPDDLYYRHKVSPYVGRTIGGRVRATYLRGQCIYDDEQFIGAP-KGQLL 442 (443)
T ss_pred CCEEEEcCCCcEEEcHHHhhhcCCCCCcCCcEEeeEEEEEEECCEEEEECCeeccCC-CCccc
Confidence 999999999899999888888899999999999999999999999999999987544 88876
No 13
>PRK07627 dihydroorotase; Provisional
Probab=100.00 E-value=1.1e-60 Score=513.00 Aligned_cols=421 Identities=18% Similarity=0.206 Sum_probs=350.3
Q ss_pred ccEEEEccEEEcCCCc--eeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHH
Q psy10113 19 NRLLIKNGKVVNADKI--SDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHG 96 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~--~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g 96 (596)
|+++|+|++|+++... ..++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+. ....+++.++
T Consensus 1 m~~~i~~~~v~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~iDa~g~~vlPG~iD~H~H~~~~g--~~~~e~~~t~ 78 (425)
T PRK07627 1 MKIHIKGGRLIDPAAGTDRQADLYVAAGKIAAIGQAPAGFNADKTIDASGLIVCPGLVDLSARLREPG--YEYKATLESE 78 (425)
T ss_pred CeEEEEeeEEECCCCCccceeEEEEECCEEEEecCCCcCCCCCeEEECCCCEEeccEEeccccccCCC--ccccCcHHHH
Confidence 4799999999986443 47899999999999997543234679999999999999999999997663 3567899999
Q ss_pred HHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccc-ccCCChhHHHHHHHHHHHcCCCEEEEEeecC
Q psy10113 97 TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVG-ITWWSDQVQQEMAELCEKHGVNSFKTFMAYK 175 (596)
Q Consensus 97 ~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~ 175 (596)
+++|+++|||||+++....+..+..+.++...........+++..+.. ...+..+...++.++++ .|+.+||.+
T Consensus 79 s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~l~~-~G~~~fk~~---- 153 (425)
T PRK07627 79 MAAAVAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQAHVYPLGALTVGLKGEVLTEMVELTE-AGCVGFSQA---- 153 (425)
T ss_pred HHHHHhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCceeEEEeCeEEcCCCccCHHHHHHHHh-CCEEEEEcC----
Confidence 999999999999998755444444444444444444333444333332 23445556778888864 599999854
Q ss_pred CCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeE
Q psy10113 176 GLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLY 255 (596)
Q Consensus 176 ~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~ 255 (596)
+....++..++++++.++++|.++.+|+|+..++.. .....|......+..++|...|.+++.+++.+|+.++||+|
T Consensus 154 ~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~~~~~---~~~~~g~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~h 230 (425)
T PRK07627 154 NVPVVDTQVLLRALQYASTFGFTVWLRPLDAFLGRG---GVAASGAVASRLGLSGVPVAAETIALHTIFELMRVTGARVH 230 (425)
T ss_pred CcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhhC---CCcCCCHhHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEE
Confidence 223468889999999999999999999999764321 11222333344556778999999999999999999999999
Q ss_pred EEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCc
Q psy10113 256 VVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENAL 335 (596)
Q Consensus 256 i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~ 335 (596)
++|+++.+++++|+.+|++ |+ .|++|+|++||.++..++.. ....++++||||. .+++++||+++.+|.+
T Consensus 231 i~HvSs~~~~~~i~~ak~~----g~--~vt~Ev~ph~L~l~~~~~~~---~~~~~k~~PPLR~-~~d~~~L~~~l~~G~i 300 (425)
T PRK07627 231 LARLSSAAGVALVRAAKAE----GL--PVTCDVGVNHVHLIDVDIGY---FDSQFRLDPPLRS-QRDREAIRAALADGTI 300 (425)
T ss_pred EEeCCCHHHHHHHHHHHHC----CC--CeEEEeccchheEeHhHHhc---cCCceEEeCCCCC-HHHHHHHHHHHhcCCC
Confidence 9999999999999999999 99 99999999999999888742 3457889999997 6899999999999999
Q ss_pred cEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCC
Q psy10113 336 QTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSD 415 (596)
Q Consensus 336 ~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ 415 (596)
++++|||+|+....|. .+|..+|.|++|+|..+++++..++ .++++++++++++|.|||++||+ ++|+|++|++
T Consensus 301 d~i~SDHaP~~~~~k~---~~~~~~~~G~~g~e~~~pl~~~~~~-~~~i~~~~~l~~~t~~pA~~lg~--~~G~l~~G~~ 374 (425)
T PRK07627 301 DAICSDHTPVDDDEKL---LPFAEATPGATGLELLLPLTLKWAD-EAKVPLARALARITSAPARVLGL--PAGRLAEGAP 374 (425)
T ss_pred cEEEcCCCCCCHHHcc---CCHhhCCCCceeHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHhCC--CCCcccCCCc
Confidence 9999999999877765 3799999999999999999987554 67899999999999999999999 5799999999
Q ss_pred ccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEEC
Q psy10113 416 ADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE 465 (596)
Q Consensus 416 ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~d 465 (596)
||||+||++..++++.+.+++.+.|+||+|+++.|+|..||++|++||++
T Consensus 375 ADlvv~d~~~~~~v~~~~~~s~~~~sp~~g~~~~g~v~~t~v~G~~v~~~ 424 (425)
T PRK07627 375 ADLCVFDPDAHWRVEPRALKSQGKNTPFLGYELPGRVRATLVAGQVAFER 424 (425)
T ss_pred CCEEEECCCCcEEEChhhccccCCCCCCcCCEeeeEEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999999999986
No 14
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=100.00 E-value=2.2e-59 Score=509.89 Aligned_cols=443 Identities=30% Similarity=0.410 Sum_probs=389.0
Q ss_pred cEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHHH
Q psy10113 20 RLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKA 99 (596)
Q Consensus 20 ~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~ 99 (596)
+++|+||+|++++...+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+. ....+++.+++++
T Consensus 1 dl~i~~~~v~~~~~~~~~~v~I~~g~I~~i~~~~~~~~~~~~iDa~G~~v~PG~ID~H~H~~~~~--~~~~e~~~~~s~a 78 (447)
T cd01315 1 DLVIKNGRVVTPDGVREADIAVKGGKIAAIGPDIANTEAEEVIDAGGLVVMPGLIDTHVHINEPG--RTEWEGFETGTKA 78 (447)
T ss_pred CEEEECCEEECCCCceEeEEEEECCEEEEEeCCCCCCCCCeEEECCCCEEeccEeeceeccCCCC--ccccccHHHHHHH
Confidence 58999999999877778999999999999998654345789999999999999999999997653 2356889999999
Q ss_pred HHhCCceEEecccc-CCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCC-
Q psy10113 100 AVAGGTTTIIDFAL-PRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGL- 177 (596)
Q Consensus 100 al~~GtTti~D~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~- 177 (596)
|+++||||++|+.. ..+.....+.++...+.......++++++...... ..++++++.+ .|+.+||+|+.+...
T Consensus 79 al~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~ei~~l~~-~G~~giKv~~~~~~~~ 154 (447)
T cd01315 79 AAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWGGLVPG---NLDQLRPLDE-AGVVGFKCFLCPSGVD 154 (447)
T ss_pred HHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEEeecCC---CHHHHHHHHH-cCCcEEEEEecccCCC
Confidence 99999999999963 23455566777777776666678899887654433 3556666654 599999999875432
Q ss_pred --ccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeE
Q psy10113 178 --YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLY 255 (596)
Q Consensus 178 --~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~ 255 (596)
...++++++++++.|+++|.++.+|+++.+++..........|...+.++...+|...|.+++.+++.+|+..++++|
T Consensus 155 ~~~~~~~~~l~~~~~~a~~~g~~v~vH~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~~~~~~~la~~~g~~ih 234 (447)
T cd01315 155 EFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAKGKRDYRDYLASRPVFTEVEAIQRILLLAKETGCRLH 234 (447)
T ss_pred CcccCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHhHhhcCCCChHHhhccCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 236888999999999999999999999999888888888889999898999999999999999999999999999999
Q ss_pred EEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCc
Q psy10113 256 VVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENAL 335 (596)
Q Consensus 256 i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~ 335 (596)
+.|+++..+.+.++.++.. |. .+++|+++++|.++..++.. .+..+.++||+|. ..++++||++++.|.+
T Consensus 235 i~h~s~~~~~~~i~~~~~~----g~--~i~~e~~~h~l~~~~~~~~~---~~~~~~~~Pplr~-~~~~~~l~~~l~~g~i 304 (447)
T cd01315 235 IVHLSSAEAVPLIREARAE----GV--DVTVETCPHYLTFTAEDVPD---GGTEFKCAPPIRD-AANQEQLWEALENGDI 304 (447)
T ss_pred EEeCCCHHHHHHHHHHHHC----CC--ceEEEeccccEEEcHHHccC---CCCceEECCCCCC-hHHHHHHHHHHhCCce
Confidence 9999999999999999988 99 99999999999998877653 3456789999998 5788999999999999
Q ss_pred cEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCC
Q psy10113 336 QTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSD 415 (596)
Q Consensus 336 ~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ 415 (596)
.+++|||+|+....|..+..+|...+.|+.|++..|+.+|..++..++++++++++++|.|||++||+++++|+|++|++
T Consensus 305 ~~i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~pa~~~g~~~~~G~l~~g~~ 384 (447)
T cd01315 305 DMVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVNKRGLSLEDIARLMCENPAKLFGLSHQKGRIAVGYD 384 (447)
T ss_pred eEEeCCCCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCccccCCCC
Confidence 99999999999888876667899999999999999999999888889999999999999999999999878999999999
Q ss_pred ccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeec
Q psy10113 416 ADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLP 479 (596)
Q Consensus 416 ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~ 479 (596)
|||||||++..+.++.+.+++...++||+|+.+.|+|..||++|++||++|++.... .||||+
T Consensus 385 Ad~~v~d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~ti~~G~~v~~~~~~~~~~-~G~~~~ 447 (447)
T cd01315 385 ADFVVWDPEEEFTVDAEDLYYKNKISPYVGRTLKGRVHATILRGTVVYQDGEVVGEP-LGQLLL 447 (447)
T ss_pred CCEEEEcCCCCEEEcHHHccccCCCCCccCeEEeeeEEEEEECCEEEEECCeEccCC-CceEeC
Confidence 999999999989998888888899999999999999999999999999999998766 899974
No 15
>PRK09060 dihydroorotase; Validated
Probab=100.00 E-value=1.4e-58 Score=500.69 Aligned_cols=436 Identities=27% Similarity=0.357 Sum_probs=370.5
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHH
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGT 97 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~ 97 (596)
.++++|+|++|++++....++|+|+||+|.+|++... +.+.++||++|++|+|||||+|+|+..+. ....+++.+++
T Consensus 4 ~~d~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~-~~~~~~iD~~G~~v~PG~ID~HvH~~~~~--~~~~e~~~t~~ 80 (444)
T PRK09060 4 TFDLILKGGTVVNPDGEGRADIGIRDGRIAAIGDLSG-ASAGEVIDCRGLHVLPGVIDSQVHFREPG--LEHKEDLETGS 80 (444)
T ss_pred cCcEEEECCEEECCCCCeeeEEEEECCEEEEecCCCC-CCCceEEECCCCEEccCEEeccccccCCC--CCccchHHHHH
Confidence 3679999999999877778999999999999986543 23568999999999999999999987553 34678999999
Q ss_pred HHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCC-
Q psy10113 98 KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKG- 176 (596)
Q Consensus 98 ~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~- 176 (596)
++++++||||++|+....+.....+.+....+.+...+.++|+++......+. +++.++....|+.+|+.||.+..
T Consensus 81 ~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~~---~~l~el~~~~gv~g~k~fm~~~~~ 157 (444)
T PRK09060 81 RAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMHCDFAFYVGGTRDNA---DELAELERLPGCAGIKVFMGSSTG 157 (444)
T ss_pred HHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccceeeEEEEeccCCCCH---HHHHHHHhhcCceEEEEEeccCCC
Confidence 99999999999999766666677778887777777778999999987765544 34455444459999999996421
Q ss_pred -CccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeE
Q psy10113 177 -LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLY 255 (596)
Q Consensus 177 -~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~ 255 (596)
....++..+.++++. .+.++.+|+|+..++... +.+...| .+..|..++|+..|.+++.+++.+|+..++|+|
T Consensus 158 ~~~~~d~~~l~~~~~~---~~~~v~~H~E~~~l~~~~-~~~~~~g--~~~~~~~~~p~~aE~~av~~~~~la~~~~~~lh 231 (444)
T PRK09060 158 DLLVEDDEGLRRILRN---GRRRAAFHSEDEYRLRER-KGLRVEG--DPSSHPVWRDEEAALLATRRLVRLARETGRRIH 231 (444)
T ss_pred CcccCCHHHHHHHHHh---CCCeEEEECCCHHHHHHH-HHHHhcC--CcccccccCCHHHHHHHHHHHHHHHHHHCCCEE
Confidence 212344456666543 589999999998877654 5566777 777888899999999999999999999999999
Q ss_pred EEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCc
Q psy10113 256 VVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENAL 335 (596)
Q Consensus 256 i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~ 335 (596)
++|+++.++.+.++++ +- .+++|++++||.++..++... ....+.++||+|. .+++++||++++.|.+
T Consensus 232 i~h~st~~~v~~i~~~-------~~--~vt~ev~ph~l~l~~~~~~~~--~~~~~k~~PPlr~-~~~~~~l~~al~~G~i 299 (444)
T PRK09060 232 VLHVSTAEEIDFLADH-------KD--VATVEVTPHHLTLAAPECYER--LGTLAQMNPPIRD-ARHRDGLWRGVRQGVV 299 (444)
T ss_pred EEeCCCHHHHHHHHHh-------CC--CeEEEeChHHhccCchhhccc--CCceEEEeCCCCC-HHHHHHHHHHHhCCCc
Confidence 9999999998888765 33 589999999999998873322 2345679999998 7889999999999999
Q ss_pred cEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCC
Q psy10113 336 QTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSD 415 (596)
Q Consensus 336 ~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ 415 (596)
.+++|||+|+...+|.. +|..+|.|++|+|..+++++. .+..+.++++++++++|.||||+||+ +++|+|++|++
T Consensus 300 d~i~sDh~p~~~~~k~~---~~~~~~~G~~g~e~~~~l~~~-~v~~g~l~~~~~~~~~s~~pa~~~gl-~~~G~l~~G~~ 374 (444)
T PRK09060 300 DVLGSDHAPHTLEEKAK---PYPASPSGMTGVQTLVPIMLD-HVNAGRLSLERFVDLTSAGPARIFGI-AGKGRIAVGYD 374 (444)
T ss_pred cEEecCCCCCCHHHhcC---CcccCCCCcccHHHHHHHHHH-HHHcCCCCHHHHHHHHhHhHHHHhCC-CCCCcccCCCc
Confidence 99999999999888764 799999999999999999996 48888999999999999999999999 67899999999
Q ss_pred ccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecCCCC
Q psy10113 416 ADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTN 483 (596)
Q Consensus 416 ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~~~~ 483 (596)
|||||+|++..++++.+.+++...|+||+|+++.|+|..||++|++||++|++.. .+.|+|+++..+
T Consensus 375 ADlvl~d~~~~~~v~~~~~~s~~~~sp~~g~~l~g~~~~tiv~G~~v~~~g~~~~-~~~G~~~~~~~~ 441 (444)
T PRK09060 375 ADFTIVDLKRRETITNEWIASRCGWTPYDGKEVTGWPVGTIVRGQRVMWDGELVG-PPTGEPVRFLET 441 (444)
T ss_pred CCEEEEcCCCCEEEChHHhcccCCCCCCCCCEEeeeEEEEEECCEEEEECCEEcc-CCCccCcccccc
Confidence 9999999999999999999999999999999999999999999999999999875 579999997654
No 16
>PRK09059 dihydroorotase; Validated
Probab=100.00 E-value=2.5e-59 Score=503.27 Aligned_cols=420 Identities=19% Similarity=0.254 Sum_probs=359.8
Q ss_pred ccEEEEccEEEcCCCce--eeeEEEECCeEEEeccCCC---CCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchH
Q psy10113 19 NRLLIKNGKVVNADKIS--DLDIYIENGVIQQLGRNLI---VPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDF 93 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~--~~dV~IedG~I~~Ig~~~~---~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~ 93 (596)
.+++|+|++|++++... .++|+|+||+|++|++... .+.+.++||++|++|+|||||+|+|+..++ ....+++
T Consensus 3 ~~~~i~n~~v~~~~~~~~~~~~v~I~~G~I~~i~~~~~~~~~~~~~~viDa~G~~v~PG~ID~HvH~~~~~--~~~~e~~ 80 (429)
T PRK09059 3 RPILLANARIIDPSRGLDEIGTVLIEDGVIVAAGKGAGNQGAPEGAEIVDCAGKAVAPGLVDARVFVGEPG--AEHRETI 80 (429)
T ss_pred cCEEEEeeEEECCCCCcccceEEEEECCEEEEecCccccccCCCCCeEEECCCCEEeccEEecccccCCCC--chhhhhH
Confidence 46899999999976543 6999999999999997532 234678999999999999999999997654 3567889
Q ss_pred HHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCC-ChhHHHHHHHHHHHcCCCEEEEEe
Q psy10113 94 YHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWW-SDQVQQEMAELCEKHGVNSFKTFM 172 (596)
Q Consensus 94 ~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~lv~~~Gv~~~k~~~ 172 (596)
.+++++++++||||++++....+.....+.++.+.+.+...++++|.++..++.+ ..+...++..+. +.|+.+|+.+
T Consensus 81 ~~~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~-~~Gv~~f~~~- 158 (429)
T PRK09059 81 ASASRAAAAGGVTSIIMMPDTDPVIDDVALVEFVKRTARDTAIVNIHPAAAITKGLAGEEMTEFGLLR-AAGAVAFTDG- 158 (429)
T ss_pred HHHHHHHHhCCcEEEEeccCCCCCCCCHHHHHHHHHHhcccCcccEEEEeEEecCCCCcchHHHHHHH-hcCcEEEecC-
Confidence 9999999999999999997655555666777777777777778999998887765 455577887775 4588877621
Q ss_pred ecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCC
Q psy10113 173 AYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDC 252 (596)
Q Consensus 173 ~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~ 252 (596)
+....+...++++++.++++|.++.+|+|+.+++.. .....|......|..++|...|..++.+++.+++..++
T Consensus 159 ---~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~---~~~~~~~~~~~~~~~~rP~~aE~~av~r~~~la~~~~~ 232 (429)
T PRK09059 159 ---RRSVANTQVMRRALTYARDFDAVIVHETRDPDLGGN---GVMNEGLFASWLGLSGIPREAEVIPLERDLRLAALTRG 232 (429)
T ss_pred ---CcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhcC---CCcCCcHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCC
Confidence 122235556889999999999999999999876441 11222333345566789999999999999999999999
Q ss_pred CeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhc
Q psy10113 253 PLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNE 332 (596)
Q Consensus 253 p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~ 332 (596)
|+|++|+++.++.++|+.+|++ |+ .|++|++++||.++..++.. ....+.++||+|. .+++++||+.+.+
T Consensus 233 ~~hi~hvs~~~~~~~i~~ak~~----g~--~vt~ev~phhL~l~~~~~~~---~~~~~kvnPPLR~-~~d~~~L~~~l~~ 302 (429)
T PRK09059 233 RYHAAQISCAESAEALRRAKDR----GL--KVTAGVSINHLSLNENDIGE---YRTFFKLSPPLRT-EDDRVAMVEAVAS 302 (429)
T ss_pred cEEEEecCCHHHHHHHHHHHHC----CC--CEEEeecHHHHhccHHHHhc---cCCccEEcCCCCC-HHHHHHHHHHHHc
Confidence 9999999999999999999998 99 99999999999999887643 3456789999997 6899999999999
Q ss_pred CCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccC
Q psy10113 333 NALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAE 412 (596)
Q Consensus 333 G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~ 412 (596)
|.+.+++|||+|++...|.. +|...|.|++|+|..++++|. ++..+.++++++++++|+||||+||+ + +|+|++
T Consensus 303 g~id~i~sDh~p~~~~~K~~---~~~~~~~G~~gle~~l~~~~~-~v~~~~l~l~~~~~~~s~nPA~~~gl-~-~G~l~~ 376 (429)
T PRK09059 303 GTIDIIVSSHDPQDVDTKRL---PFSEAAAGAIGLETLLAAALR-LYHNGEVPLLRLIEALSTRPAEIFGL-P-AGTLKP 376 (429)
T ss_pred CCCcEEEeCCCCCCHHHCcC---ChhhCCCCcccHHHHHHHHHH-HHHcCCCCHHHHHHHHhHHHHHHhCC-C-cCcccC
Confidence 99999999999999888763 799999999999999999996 78889999999999999999999999 4 699999
Q ss_pred CCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEE
Q psy10113 413 GSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVD 464 (596)
Q Consensus 413 G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~ 464 (596)
|++||||+||++..++++.+.+++...|+||+|+++.|+|..||++|++||+
T Consensus 377 G~~ADlvl~d~~~~~~v~~~~~~s~~~~sPf~G~~l~G~v~~ti~~G~~v~~ 428 (429)
T PRK09059 377 GAPADIIVIDLDEPWVVDPEDLKSRSKNTPFEEARFQGRVVRTIVAGKTVYE 428 (429)
T ss_pred CCcCCEEEECCCCCEEECcccCccCCCCCCCCCCEEeeEEEEEEECCEEEee
Confidence 9999999999999999999999999999999999999999999999999985
No 17
>PRK07575 dihydroorotase; Provisional
Probab=100.00 E-value=2.4e-58 Score=498.41 Aligned_cols=431 Identities=23% Similarity=0.361 Sum_probs=362.5
Q ss_pred cccEEEEccEEEcCCC-ceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHH
Q psy10113 18 QNRLLIKNGKVVNADK-ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHG 96 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~-~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g 96 (596)
+|+++|+|++|++++. ...++|+|+||+|.+|++....+.+.++||++|++|+|||||+|+|+..+ +....++++++
T Consensus 2 ~~~~~i~~~~i~~~~~~~~~~~I~I~dg~I~~ig~~~~~~~~~~vid~~g~~v~PG~ID~H~H~~~~--~~~~~e~~~~~ 79 (438)
T PRK07575 2 MMSLLIRNARILLPSGELLLGDVLVEDGKIVAIAPEISATAVDTVIDAEGLTLLPGVIDPQVHFREP--GLEHKEDLFTA 79 (438)
T ss_pred cceEEEECCEEECCCCCEEeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEcccEEEeeeccCCC--CCcCcchHHHH
Confidence 3678999999998655 45689999999999999764333346899999999999999999998654 34578999999
Q ss_pred HHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCC
Q psy10113 97 TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKG 176 (596)
Q Consensus 97 ~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~ 176 (596)
+++++++||||++|+....+..+..+.+....+.+.....++|+++.+.+.. ...++..+ .|+.+|+.|+.+..
T Consensus 80 ~~aa~~gGvTt~~dmp~~~p~~~~~~~~~~~~~~a~~~~~v~~~~~~~~~~~---~l~~l~~~---~~~~g~~~f~~~~~ 153 (438)
T PRK07575 80 SRACAKGGVTSFLEMPNTKPLTTTQAALDDKLARAAEKCVVNYGFFIGATPD---NLPELLTA---NPTCGIKIFMGSSH 153 (438)
T ss_pred HHHHHhCCEEEEEECCCCCCCCCcHHHHHHHHHHhccCcEEEEEEEcccccc---CHHHHHHh---hCCeEEEEEEeeCC
Confidence 9999999999999998766666777778887777777789999999776532 23344432 37888999875321
Q ss_pred -CccCCHHH-HHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCe
Q psy10113 177 -LYMLSDGE-LYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPL 254 (596)
Q Consensus 177 -~~~~~~~~-l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~ 254 (596)
.....+.. +.+. ....+.++.+|+|+..++.... ....|...+..|..++|...|.+++.+++.+|++.++++
T Consensus 154 ~~~~~~~~~~~~~~---~~~~~~~v~~h~e~~~l~~~~~--~~~~g~~~~~~~~~~~p~~aE~~av~~~~~la~~~g~~l 228 (438)
T PRK07575 154 GPLLVDEEAALERI---FAEGTRLIAVHAEDQARIRARR--AEFAGISDPADHSQIQDEEAALLATRLALKLSKKYQRRL 228 (438)
T ss_pred CCcccCcHHHHHHH---HHhCCCEEEEeCcChHHHHhhh--HhhccCcCcccccccCcHHHHHHHHHHHHHHHHHHCCCE
Confidence 11223333 3333 3467999999999988654322 344677788888889999999999999999999999999
Q ss_pred EEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCC
Q psy10113 255 YVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENA 334 (596)
Q Consensus 255 ~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~ 334 (596)
|++|+++.+..+++++++ +. .+++|++++||.++..++.. ....+.++||+|. .+++++||+++++|.
T Consensus 229 hi~HiSt~~~v~~i~~~k------~~--~vt~ev~phhL~l~~~~~~~---~~~~~k~~PPLR~-~~d~~~L~~~l~~G~ 296 (438)
T PRK07575 229 HILHLSTAIEAELLRQDK------PS--WVTAEVTPQHLLLNTDAYER---IGTLAQMNPPLRS-PEDNEALWQALRDGV 296 (438)
T ss_pred EEEECCCHHHHHHHHHhc------CC--CEEEEEchhhheeCHHHHhC---CCceEEEeCCCCC-HHHHHHHHHHHhCCC
Confidence 999999999999988764 45 79999999999999988643 2345678999998 688999999999999
Q ss_pred ccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCC
Q psy10113 335 LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGS 414 (596)
Q Consensus 335 ~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~ 414 (596)
+++++|||+|++...|.. +|.+.|.|++|+|.+++++|+.+ ..++++++++++++|.||||+||+ +++|+|++|+
T Consensus 297 id~i~sDh~p~~~~~k~~---~~~~~~~G~~g~e~~l~~l~~~~-~~~~lsl~~~~~~~s~npAk~lgl-~~~G~L~~G~ 371 (438)
T PRK07575 297 IDFIATDHAPHTLEEKAQ---PYPNSPSGMPGVETSLPLMLTAA-MRGKCTVAQVVRWMSTAVARAYGI-PNKGRIAPGY 371 (438)
T ss_pred CCEEecCCCCCCHHHccC---CcccCCCCcccHHHHHHHHHHHH-hcCCCCHHHHHHHHhhhHHHHcCC-CCCCccCCCC
Confidence 999999999999888863 79999999999999999999875 568899999999999999999999 6789999999
Q ss_pred CccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeec
Q psy10113 415 DADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLP 479 (596)
Q Consensus 415 ~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~ 479 (596)
+|||||||++..++++.+.+++...|+||+|+++.|++..||++|++||++|++. .++.|+||+
T Consensus 372 ~ADlvi~D~~~~~~v~~~~~~s~~~~sp~~g~~~~G~v~~tiv~G~~v~~~g~~~-~~~~G~~~~ 435 (438)
T PRK07575 372 DADLVLVDLNTYRPVRREELLTKCGWSPFEGWNLTGWPVTTIVGGQIVFDRGQVN-TEVRGQALT 435 (438)
T ss_pred cCCEEEEcCCCCEEEchHHccccCCCCCCCCCEEeeEEEEEEECCEEEEECCEEc-cCCCceEee
Confidence 9999999999999999999999999999999999999999999999999999987 567999997
No 18
>PRK09236 dihydroorotase; Reviewed
Probab=100.00 E-value=3.6e-58 Score=498.42 Aligned_cols=437 Identities=25% Similarity=0.344 Sum_probs=371.8
Q ss_pred ccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHH
Q psy10113 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTK 98 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~ 98 (596)
++++|+|++|++++....++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+. ....+++.++++
T Consensus 2 ~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~ID~HvH~~~~~--~~~~e~~~~~~~ 79 (444)
T PRK09236 2 KRILIKNARIVNEGKIFEGDVLIENGRIAKIASSISAKSADTVIDAAGRYLLPGMIDDQVHFREPG--LTHKGDIASESR 79 (444)
T ss_pred ccEEEECCEEEcCCCceEeEEEEECCEEEEecCCCCCCCCCeEEECCCCEECCCEEEcccccccCc--ccccccHHHHHH
Confidence 578999999999877778999999999999987654334668999999999999999999987543 234578899999
Q ss_pred HHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecC-CC
Q psy10113 99 AAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYK-GL 177 (596)
Q Consensus 99 ~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~-~~ 177 (596)
+++++||||++|+....+.....+.+....+.+.....++|+++.+.+..+ .+++.++++ .|+.+||+|+.+. +.
T Consensus 80 aa~~~GvTtv~d~p~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~e~~~l~~-~g~~g~k~~~~~~~~~ 155 (444)
T PRK09236 80 AAVAGGITSFMEMPNTNPPTTTLEALEAKYQIAAQRSLANYSFYFGATNDN---LDEIKRLDP-KRVCGVKVFMGASTGN 155 (444)
T ss_pred HHHhCCcEEEEeCCCCCCCcCcHHHHHHHHHHhccCeEEEEEEEeccCccc---HHHHHHHHH-ccCcEEEEEeccCCCC
Confidence 999999999999976555556677777777777777889999988665332 567777764 5999999998642 22
Q ss_pred ccCCHH-HHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHc-CCC-CCCcccCCChHHHHHHHHHHHHHHhcccCCCe
Q psy10113 178 YMLSDG-ELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAA-GIK-GPEGHQLSRPEEVEAEAVTRACTIANQVDCPL 254 (596)
Q Consensus 178 ~~~~~~-~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~-Gi~-~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~ 254 (596)
....+. .+++++ +..+.++.+|+|+..++......+... |.. .+..|..++|++.|..++.+++.++++.++++
T Consensus 156 ~~~~~~~~~~~~~---~~~~~~v~~H~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~rp~~ae~~av~~~~~la~~~~~~~ 232 (444)
T PRK09236 156 MLVDNPETLERIF---RDAPTLIATHCEDTPTIKANLAKYKEKYGDDIPAEMHPLIRSAEACYKSSSLAVSLAKKHGTRL 232 (444)
T ss_pred cccCcHHHHHHHH---HhcCCEEEEecCCHHHHHHHHHHHHHhcCCCCChhhccccCCHHHHHHHHHHHHHHHHHHCCCE
Confidence 223433 444443 456899999999998887666555554 643 56678889999999999999999999999999
Q ss_pred EEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCC
Q psy10113 255 YVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENA 334 (596)
Q Consensus 255 ~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~ 334 (596)
|++|+++....+.+..++.. |. .+++|+++++|.++..++.. ....++++||+|. .+++++||+++++|.
T Consensus 233 hi~h~st~~~~~~i~~~~~~----g~--~vt~e~~~H~l~l~~~~~~~---~~~~~~~~Pplr~-~~~~~~l~~~l~~G~ 302 (444)
T PRK09236 233 HVLHISTAKELSLFENGPLA----EK--RITAEVCVHHLWFDDSDYAR---LGNLIKCNPAIKT-ASDREALRQALADDR 302 (444)
T ss_pred EEEeCCCHHHHHHHHHHHHC----CC--CEEEEEchhhhhcCHHHHhc---cCceEEECCCCCC-HHHHHHHHHHHhCCC
Confidence 99999999999999998888 98 99999999999999877643 2556789999998 688999999999999
Q ss_pred ccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCC
Q psy10113 335 LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGS 414 (596)
Q Consensus 335 ~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~ 414 (596)
+++++|||+++....+.. +|...|+|+.++|..++.+|+ .+..+.++++++++++|.|||++||+ +++|+|++|+
T Consensus 303 i~~igtDh~p~~~~~k~~---~~~~~~~G~~~~e~~l~~l~~-~v~~~~~~~~~~~~~~t~~pA~~lgl-~~~G~l~~G~ 377 (444)
T PRK09236 303 IDVIATDHAPHTWEEKQG---PYFQAPSGLPLVQHALPALLE-LVHEGKLSLEKVVEKTSHAPAILFDI-KERGFIREGY 377 (444)
T ss_pred CcEEECCCCCCCHHHhcC---CcccCCCCcccHHHHHHHHHH-HHHhcCCCHHHHHHHHHHhHHHhcCC-CCCCccccCC
Confidence 999999999998777653 799999999999999999996 56778899999999999999999999 5689999999
Q ss_pred CccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecC
Q psy10113 415 DADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPT 480 (596)
Q Consensus 415 ~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~ 480 (596)
+|||||||++.+++++.+.+++...|+||+|+++.|.|.+||++|++||+||++.... .|+++++
T Consensus 378 ~ADlvi~d~~~~~~~~~~~~~s~~~~sp~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~-~G~~~~~ 442 (444)
T PRK09236 378 WADLVLVDLNSPWTVTKENILYKCGWSPFEGRTFRSRVATTFVNGQLVYHNGQLVESC-RGQRLEF 442 (444)
T ss_pred cCCEEEEcCCCCEEEchHHhcccCCCCCCCCCEEeeeEEEEEECCEEEEECCEEccCc-CceEeec
Confidence 9999999999999999999999999999999999999999999999999999988666 9999984
No 19
>PRK02382 dihydroorotase; Provisional
Probab=100.00 E-value=3.2e-58 Score=498.66 Aligned_cols=435 Identities=28% Similarity=0.430 Sum_probs=372.5
Q ss_pred ccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHH
Q psy10113 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTK 98 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~ 98 (596)
.+++|+|++|++.+....++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+. ....+++.++++
T Consensus 2 ~dl~i~n~~v~~~~~~~~~~v~I~dg~I~~i~~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~g--~~~~e~~~~~~~ 79 (443)
T PRK02382 2 RDALLKDGRVYYNNSLQPRDVRIDGGKITAVGKDLDGSSSEEVIDARGMLLLPGGIDVHVHFREPG--YTHKETWYTGSR 79 (443)
T ss_pred ceEEEECCEEEeCCCceEEEEEEECCEEEEecCCCCCCCCCeEEECCCCEEcCCEeeeeeeccCCC--CCchhhHHHHHH
Confidence 579999999998766678999999999999987544334578999999999999999999986543 345688999999
Q ss_pred HHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEE-EEEeecC-C
Q psy10113 99 AAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSF-KTFMAYK-G 176 (596)
Q Consensus 99 ~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~-k~~~~~~-~ 176 (596)
+++++||||++++....+.....+.++.....+...+.++|+++..... ..+++..++.. |+.++ |+|+.+. +
T Consensus 80 aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~~~~~~----~~~~l~~l~~~-gv~~~gkv~~~~~~~ 154 (443)
T PRK02382 80 SAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSIVDFGINGGVTG----NWDPLESLWER-GVFALGEIFMADSTG 154 (443)
T ss_pred HHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCceEEEEEEeeecc----chhhHHHHHhc-CccceeEEEEEecCC
Confidence 9999999999999766666566677777777776667889988754431 24567777654 99988 8888653 3
Q ss_pred CccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEE
Q psy10113 177 LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYV 256 (596)
Q Consensus 177 ~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i 256 (596)
....+++.++++++.++++|.++.+|+++.+++..... ...|...+..+..++|...|..++.+++.+|+..++++|+
T Consensus 155 ~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~--~~~g~~~~~~~~~~~p~~~E~~av~~~~~la~~~g~~~hi 232 (443)
T PRK02382 155 GMGIDEELFEEALAEAARLGVLATVHAEDEDLFDELAK--LLKGDADADAWSAYRPAAAEAAAVERALEVASETGARIHI 232 (443)
T ss_pred CcccCHHHHHHHHHHHHhcCCeEEEecCCHHHHHHhhH--hhcCCCCHhhCCCcCCHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 34568889999999999999999999999887553322 2447777888888899999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCcc
Q psy10113 257 VHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQ 336 (596)
Q Consensus 257 ~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~ 336 (596)
.|+++..+.++++++ .|++|+++++|.++..++.. ....+.++||+|. .+++++||+.+.+|.+.
T Consensus 233 ~h~ss~~~~~~i~~~-----------~vt~ev~ph~L~l~~~~~~~---~~~~~k~~PPlr~-~~d~~aL~~~l~~g~i~ 297 (443)
T PRK02382 233 AHISTPEGVDAARRE-----------GITCEVTPHHLFLSRRDWER---LGTFGKMNPPLRS-EKRREALWERLNDGTID 297 (443)
T ss_pred EECCCHHHHHHHHHC-----------CcEEEEchhhhhcCHHHHhc---cCceEEEcCCCCC-hHHHHHHHHHHhCCCCC
Confidence 999999998888743 48999999999999887642 2334578999998 68899999999999999
Q ss_pred EEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCc
Q psy10113 337 TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDA 416 (596)
Q Consensus 337 ~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~A 416 (596)
+++|||+|++..+|.. +|+..|.|++|+|..++++|. ++..++++++++++++|.|||++||+ +++|+|++|++|
T Consensus 298 ~i~sDh~P~~~~~K~~---~~~~~~~G~~g~e~~~~~~~~-~~~~~~~~l~~~~~~~t~~pA~~~g~-~~~G~l~~G~~A 372 (443)
T PRK02382 298 VVASDHAPHTREEKDA---DIWDAPSGVPGVETMLPLLLA-AVRKNRLPLERVRDVTAANPARIFGL-DGKGRIAEGYDA 372 (443)
T ss_pred EEEcCCCCCCHHHhcC---ChhhCCCCcccHHHHHHHHHH-HHHcCCCCHHHHHHHHhHHHHHHcCC-CCCCccCCCCcC
Confidence 9999999999888864 799999999999999999995 77888999999999999999999999 578999999999
Q ss_pred cEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecCCCC
Q psy10113 417 DIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTN 483 (596)
Q Consensus 417 DlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~~~~ 483 (596)
||+|||++..+.+..+.+++...++||+|+... .|.+||++|++||++|++....|.|+|++++.|
T Consensus 373 D~vi~d~~~~~~~~~~~~~s~~~~sp~~g~~~~-~v~~tiv~G~~v~~~~~~~~~~~~G~~~~~~~~ 438 (443)
T PRK02382 373 DLVLVDPDAAREIRGDDLHSKAGWTPFEGMEGV-FPELTMVRGTVVWDGDDINAKRGRGEFLRGRGY 438 (443)
T ss_pred CEEEEcCCCcEEEcHHHhcccCCCCCcCCCEec-eEEEEEECCEEEEECCEEecCCCCceEeCCccc
Confidence 999999999999999999999999999999877 899999999999999998877789999999655
No 20
>PRK01211 dihydroorotase; Provisional
Probab=100.00 E-value=8.9e-59 Score=493.65 Aligned_cols=404 Identities=22% Similarity=0.298 Sum_probs=341.1
Q ss_pred EEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHHHHHh
Q psy10113 23 IKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVA 102 (596)
Q Consensus 23 Ikng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~ 102 (596)
|+| ++++.+....+||+|+||+|++|+++.. +.++||++| +|+|||||+|+|+..|. ....+||++++++|++
T Consensus 3 ~~~-~~~~~~~~~~~di~I~dGkI~~i~~~~~---~~~~ida~g-~vlPG~ID~HvH~r~pg--~~~ked~~s~s~AAaa 75 (409)
T PRK01211 3 ICG-NFYYKGKFDYLEIEVEDGKIKSIKKDAG---NIGKKELKG-AILPAATDIHVHFRTPG--ETEKEDFSTGTLSAIF 75 (409)
T ss_pred eec-eeEEcCcEEEEEEEEECCEEEEecCCCC---CceEEEecc-EEcCCeEEeeeccCCCC--CcccCcHHHHHHHHHc
Confidence 454 4455556678999999999999987652 468999999 99999999999998874 4678999999999999
Q ss_pred CCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCH
Q psy10113 103 GGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSD 182 (596)
Q Consensus 103 ~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~ 182 (596)
||||||+||....+..+..+.++.+.+.+...+++||++|..++.++. ++. +.|+.+||+||++... ....
T Consensus 76 GGvTtv~dmPnt~P~~~~~e~~~~~~~~a~~~s~vd~~~~~~~~~~~~----~~~----~~g~~~~k~f~~~~~~-~~~~ 146 (409)
T PRK01211 76 GGTTFIMDMPNNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSMETGNNA----LIL----DERSIGLKVYMGGTTN-TNGT 146 (409)
T ss_pred CCcEEEEECCCCCCCCChHHHHHHHHHHhccCceeeEEEEeccCCchh----hHH----hccCcEEEEEcCCCcC-CCcc
Confidence 999999999877777788999999999998889999999988754432 222 2399999999864210 0000
Q ss_pred HHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcH
Q psy10113 183 GELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSK 262 (596)
Q Consensus 183 ~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~ 262 (596)
....+.++.++.+|.++.+|+|+.+++...... .+ ....|..++|...|.+++.+++.++.. ++|++|+++.
T Consensus 147 ~~~~~~l~~~~~~g~~v~~H~E~~~l~~~~~~~---~~--~~~~~~~~rP~~aE~~ai~~~~~la~~---~~hi~HvSt~ 218 (409)
T PRK01211 147 DIEGGEIKKINEANIPVFFHAELSECLRKHQFE---SK--NLRDHDLARPIECEIKAVKYVKNLDLK---TKIIAHVSSI 218 (409)
T ss_pred ccCHHHHHHHHccCCEEEEeccChHHhhhhhhC---cc--hHhhCCCCCCHHHHHHHHHHHHHHhCC---CcEEEEecCh
Confidence 112235566778999999999998876543211 11 234577889999999999999999987 6999999997
Q ss_pred HHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCC
Q psy10113 263 AAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDN 342 (596)
Q Consensus 263 ~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~ 342 (596)
++. . .|++|+|++||.++..+. ....+.++||||. .+++++||+.|..|.+.+++|||
T Consensus 219 ~~~--------~--------~vt~Ev~phhL~l~~~~~-----~~~~~kvnPPLRs-~~d~~aL~~~l~dG~ID~i~SDH 276 (409)
T PRK01211 219 DVI--------G--------RFLREVTPHHLLLNDDMP-----LGSYGKVNPPLRD-RWTQERLLEEYISGRFDILSSDH 276 (409)
T ss_pred hhc--------C--------ceEEEecHHHHccccccc-----cCCceeEcCCCCC-HHHHHHHHHHHhCCCCCEEeCCC
Confidence 744 2 799999999999998762 3457789999997 68999999999999999999999
Q ss_pred CCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEc
Q psy10113 343 CTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWN 422 (596)
Q Consensus 343 ~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d 422 (596)
+|+....| ++|+..|+|++|+|..++++|. ++..++|+++++++++|+||||+||+ + +|+|++|++|||||||
T Consensus 277 aP~~~~eK----~~~~~a~~G~~gle~~lpl~~~-~v~~~~isl~~~v~~~s~nPAki~gl-~-kG~l~~G~~ADlvi~D 349 (409)
T PRK01211 277 APHTEEDK----QEFEYAKSGIIGVETRVPLFLA-LVKKKILPLDVLYKTAIERPASLFGI-K-KGKIEEGYDADFMAFD 349 (409)
T ss_pred CCCChhHh----CCHhhCCCCCCcHHHHHHHHHH-HHHcCCCCHHHHHHHHHHHHHHHhCC-C-CCcccCCCcCCEEEEc
Confidence 99988776 3799999999999999999996 78899999999999999999999999 4 7999999999999999
Q ss_pred CCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecCC
Q psy10113 423 YKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTH 481 (596)
Q Consensus 423 ~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~~ 481 (596)
++..++++.+.+++...++||+|+++. +|..||++|++||++|++.... .|+|+++.
T Consensus 350 ~~~~~~v~~~~~~s~~~~spf~G~~~~-~v~~tiv~G~~v~~~~~~~~~~-~G~~~~~~ 406 (409)
T PRK01211 350 FTNIKKINDKRLHSKCPVSPFNGFDAI-FPSHVIMRGEVVIDNYELISER-TGKFVPKG 406 (409)
T ss_pred CCCeEEEChHHhhccCCCCCCCCCEec-cEEEEEECCEEEEECCEEcccc-CceEeccC
Confidence 999999999999999999999999988 9999999999999999987766 99999874
No 21
>PRK08417 dihydroorotase; Provisional
Probab=100.00 E-value=2.1e-56 Score=475.52 Aligned_cols=384 Identities=20% Similarity=0.249 Sum_probs=330.2
Q ss_pred EEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCc
Q psy10113 39 IYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGE 118 (596)
Q Consensus 39 V~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~ 118 (596)
|+|+||+|++|+++. .+.++||++|++|+|||||+|+|+..+.. ..++|.+++++|++||||||+||....+..
T Consensus 1 i~I~dG~I~~i~~~~---~~~~viDa~g~~vlPG~ID~HvH~~~~~~---~~e~~~t~s~aA~aGGvTtv~dmpnt~P~~ 74 (386)
T PRK08417 1 IRIKDGKITEIGSDL---KGEEILDAKGKTLLPALVDLNVSLKNDSL---SSKNLKSLENECLKGGVGSIVLYPDSTPAI 74 (386)
T ss_pred CEEECCEEEEecCCC---CCCeEEECCCCEEccCeeEEeeeeCCCCc---ChhhHHHHHHHHHcCCcEEEEeCCCCCCCC
Confidence 689999999998764 36789999999999999999999976532 258999999999999999999997655555
Q ss_pred cHHHHHHHHHHHhcc--CceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcC
Q psy10113 119 SLIKTYESWRQKADE--KVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLG 196 (596)
Q Consensus 119 ~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g 196 (596)
+..+.++...+.+.. ...+++.. ++. .++..+++..+. +.|+.+||.+. ..+++.++++++.++++|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~i~~l~-~~Gv~~~k~~~------~~~~~~l~~~~~~a~~~g 143 (386)
T PRK08417 75 DNEIALELINSAQRELPMQIFPSIR---ALD-EDGKLSNIATLL-KKGAKALELSS------DLDANLLKVIAQYAKMLD 143 (386)
T ss_pred CCHHHHHHHHHHhhccCCcEEEEEE---EEC-CCccHHHHHHHH-HCCCEEEECCC------CCCHHHHHHHHHHHHHcC
Confidence 555556555554443 34566533 322 333467788876 46999887531 368889999999999999
Q ss_pred CeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHh
Q psy10113 197 AIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELM 276 (596)
Q Consensus 197 ~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~ 276 (596)
.++.+|+|+..++.. .+...|.+.++.+..++|...|..++.+++.+|+.+++++|++|+++.++.++|+.+|++
T Consensus 144 ~~V~~HaEd~~~~~~---~~~~~g~~~~~~~~~~rp~~aE~~~v~~~~~la~~~~~~lhi~hvS~~~~~~~i~~ak~~-- 218 (386)
T PRK08417 144 VPIFCRCEDSSFDDS---GVMNDGELSFELGLPGIPSIAETKEVAKMKELAKFYKNKVLFDTLALPRSLELLDKFKSE-- 218 (386)
T ss_pred CEEEEeCCCHHHhhH---HHHhcChhhHHhCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHC--
Confidence 999999999876553 456678778888888999999999999999999999999999999999999999999998
Q ss_pred hcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCC
Q psy10113 277 KKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDS 356 (596)
Q Consensus 277 ~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~ 356 (596)
|+ .+++|+|++||.++..++.. ....+.++||||. .+++++||+.+..|.+.+++|||+|++..+|.. +
T Consensus 219 --g~--~vt~ev~ph~L~l~~~~~~~---~~~~~k~~PPlR~-~~d~~~L~~~l~~g~Id~i~SDHaP~~~~~K~~---~ 287 (386)
T PRK08417 219 --GE--KLLKEVSIHHLILDDSACEN---FNTAAKLNPPLRS-KEDRLALLEALKEGKIDFLTSLHSAKSNSKKDL---A 287 (386)
T ss_pred --CC--CEEEEechHHHeeCHHHhcC---cCcccEECCCCCC-HHHHHHHHHHHhcCCceEEEcCCCCCCHHHccC---C
Confidence 99 99999999999999987632 2346779999998 789999999999999999999999999888753 7
Q ss_pred CCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccC
Q psy10113 357 FTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAH 436 (596)
Q Consensus 357 f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~ 436 (596)
|...|.|++|+|..++++|..++..+.++++++++++|.|||++||+ +. |+|++|++|||++||++..+.++.
T Consensus 288 ~~~a~~G~~g~e~~~~~~~~~~v~~~~~~~~~~~~~~t~~pA~~lgl-~~-G~l~~G~~ADlvi~d~~~~~~~~~----- 360 (386)
T PRK08417 288 FDEAAFGIDSICEYFSLCYTYLVKEGIITWSELSRFTSYNPAQFLGL-NS-GEIEVGKEADLVLFDPNESTIIDD----- 360 (386)
T ss_pred HhHCCCCchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCC-CC-CccCCCCcCCEEEEcCCCCeEeCC-----
Confidence 99999999999999999999999999999999999999999999999 33 999999999999999998888873
Q ss_pred CCCCCcccCeEeeeeEEEEEECCEEEEE
Q psy10113 437 ACDYNIFEGLVCHGVPEYVIVGGRVCVD 464 (596)
Q Consensus 437 ~~~~~~~~g~~~~g~~~~Vi~~GrvV~~ 464 (596)
.|+||+|+.+.|.|..||++|++||+
T Consensus 361 --~~~p~~g~~~~g~v~~tiv~G~~v~~ 386 (386)
T PRK08417 361 --NFSLYSGDELYGKIEAVIIKGKLYLE 386 (386)
T ss_pred --CCCCccCCEEeccEEEEEECCEEEeC
Confidence 48999999999999999999999985
No 22
>PRK09357 pyrC dihydroorotase; Validated
Probab=100.00 E-value=5.9e-56 Score=479.46 Aligned_cols=421 Identities=24% Similarity=0.360 Sum_probs=358.8
Q ss_pred ccEEEEccEEEcCC-CceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHH
Q psy10113 19 NRLLIKNGKVVNAD-KISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGT 97 (596)
Q Consensus 19 ~~llIkng~Iv~~d-~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~ 97 (596)
|+++|+|++|++++ ...+++|+|+||+|.+|++... +.+.++||++|++|+|||||+|+|+..+ +....++++.++
T Consensus 1 ~~~~i~~~~v~~~~~~~~~~~I~I~dg~I~~i~~~~~-~~~~~~iD~~g~~v~PG~ID~H~H~~~~--~~~~~e~~~~~~ 77 (423)
T PRK09357 1 MMILIKNGRVIDPKGLDEVADVLIDDGKIAAIGENIE-AEGAEVIDATGLVVAPGLVDLHVHLREP--GQEDKETIETGS 77 (423)
T ss_pred CcEEEEeEEEECCCCCcceeeEEEECCEEEEeeCCCC-CCCCeEEECCCCEEeCCEEecccccCCC--CccccccHHHHH
Confidence 46899999999874 4557999999999999986532 2356899999999999999999998655 346789999999
Q ss_pred HHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCC-ChhHHHHHHHHHHHcCCCEEEEEeecCC
Q psy10113 98 KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWW-SDQVQQEMAELCEKHGVNSFKTFMAYKG 176 (596)
Q Consensus 98 ~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~lv~~~Gv~~~k~~~~~~~ 176 (596)
++++++||||++|+....+.....+.++...+.+...+.+++..+..+... .....+++..+.. .|+..|+ .++
T Consensus 78 ~~a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gv~~~~----~~~ 152 (423)
T PRK09357 78 RAAAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGAITKGLAGEELTEFGALKE-AGVVAFS----DDG 152 (423)
T ss_pred HHHHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEEeCCCCccHHHHHHHHh-CCcEEEE----CCC
Confidence 999999999999998766666777777777777766666777776554322 2234566766654 5776554 334
Q ss_pred CccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEE
Q psy10113 177 LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYV 256 (596)
Q Consensus 177 ~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i 256 (596)
.+..+++.++++++.|+++|.++++|+++..++.. .+...|......+..++|...|..++.+++.+|+..++++|+
T Consensus 153 ~~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~~~~---~~~~~g~~~~~~~~~~~p~~~E~~~i~~~~~la~~~g~~~hi 229 (423)
T PRK09357 153 IPVQDARLMRRALEYAKALDLLIAQHCEDPSLTEG---GVMNEGEVSARLGLPGIPAVAEEVMIARDVLLAEATGARVHI 229 (423)
T ss_pred cccCCHHHHHHHHHHHHhcCCEEEEeCCCHHHhhc---ccccCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEE
Confidence 55668889999999999999999999998765443 235556556666777889999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCcc
Q psy10113 257 VHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQ 336 (596)
Q Consensus 257 ~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~ 336 (596)
.|+++.+..++++.++++ |+ .+++|+++++|.++..++.. ....+.++||+|. .+++++||+++++|..+
T Consensus 230 ~H~s~~~~~~~i~~a~~~----g~--~v~~e~~ph~L~~~~~~~~~---~~~~~k~~Pplr~-~~~~~~l~~~l~~G~~~ 299 (423)
T PRK09357 230 CHVSTAGSVELIRWAKAL----GI--KVTAEVTPHHLLLTDEDLLT---YDPNYKVNPPLRT-EEDREALIEGLKDGTID 299 (423)
T ss_pred EeCCCHHHHHHHHHHHHc----CC--CEEEEechHHheEcHHHHhC---cCCceEECCCCCC-HHHHHHHHHHHHcCCCe
Confidence 999999999999999998 99 99999999999999987643 2345678999997 57899999999999999
Q ss_pred EEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCc
Q psy10113 337 TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDA 416 (596)
Q Consensus 337 ~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~A 416 (596)
++||||+|++..+|.. +|...|.|+.|+|..++++|..++..+.++++++++++|.|||++||++ . |+|++|++|
T Consensus 300 ~i~sDh~p~~~~~k~~---~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~A~~~g~~-~-G~i~~G~~A 374 (423)
T PRK09357 300 AIATDHAPHAREEKEC---EFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLEKMTINPARILGLP-A-GPLAEGEPA 374 (423)
T ss_pred EEecCCCCCChHHccC---CHhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC-C-CccCCCCcC
Confidence 9999999998887764 6999999999999999999998888889999999999999999999995 3 999999999
Q ss_pred cEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEEC
Q psy10113 417 DIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE 465 (596)
Q Consensus 417 DlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~d 465 (596)
||+|+|++..++++.+.+++...++||+|+++.|+|..||++|++||+|
T Consensus 375 D~~i~d~~~~~~v~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~~ 423 (423)
T PRK09357 375 DLVIFDPEAEWTVDGEDFASKGKNTPFIGMKLKGKVVYTIVDGKIVYQD 423 (423)
T ss_pred CEEEEcCCCCEEEchhhcccCCCCCCCcCCEEeeEEEEEEECCEEEecC
Confidence 9999999999999988999999999999999999999999999999975
No 23
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=100.00 E-value=3.1e-55 Score=470.91 Aligned_cols=408 Identities=27% Similarity=0.396 Sum_probs=353.9
Q ss_pred ceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEecccc
Q psy10113 34 ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFAL 113 (596)
Q Consensus 34 ~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~ 113 (596)
...++|+|+||+|++|++. ..+.+.++||++|++|+|||||+|+|+..+ +....+++.+.+++++++||||++++..
T Consensus 3 ~~~~~v~I~~g~I~~i~~~-~~~~~~~~ida~g~~v~PG~ID~H~H~~~~--~~~~~~~~~~~~~~~~~~GvTtv~~~~~ 79 (411)
T TIGR00857 3 ETEVDILVEGGRIKKIGKL-RIPPDAEVIDAKGLLVLPGFIDLHVHLRDP--GEEYKEDIESGSKAAAHGGFTTVADMPN 79 (411)
T ss_pred eEEEEEEEECCEEEEeecc-CCCCCCeEEECCCCEEecCEEEcccCCCCC--CCccHhHHHHHHHHHHhCCeEEEEEecC
Confidence 3568999999999999752 223456899999999999999999999643 2346788999999999999999999987
Q ss_pred CCCCccHHHHHHHHHHHhccCceeeeeccccccCCChh-HHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHH
Q psy10113 114 PRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQ-VQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAI 192 (596)
Q Consensus 114 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a 192 (596)
..+.....+.++...+.+....+++|.++.+++.+... ..+++.++. +.|+.+ ++|..+ +....++..++++++.+
T Consensus 80 t~p~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~-~~Gv~g-~~f~~~-~~~~~~~~~l~~~~~~a 156 (411)
T TIGR00857 80 TKPPIDTPETLEWKLQRLKKVSLVDVHLYGGVTQGNQGKELTEAYELK-EAGAVG-RMFTDD-GSEVQDILSMRRALEYA 156 (411)
T ss_pred CCCCCCcHHHHHHHHHHhccCCcccEEEEEEEecCCccccHHHHHHHH-HCCcEE-EEEEeC-CcccCCHHHHHHHHHHH
Confidence 66667778888888888887789999999988765443 456677775 358888 333333 22346889999999999
Q ss_pred HhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHH
Q psy10113 193 KNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKR 272 (596)
Q Consensus 193 ~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~ 272 (596)
+++|+++.+|+|+.+++... +...|.+.++.|..++|+..|..++.+++.+++..+||+|++|+++.++.++|+.+|
T Consensus 157 ~~~g~~v~iH~E~~~l~~~~---~~~~g~~~~~~~~~~~p~~aE~~ai~~~~~la~~~~~~~~i~Hvs~~~~l~~i~~a~ 233 (411)
T TIGR00857 157 AIAGVPIALHAEDPDLIYGG---VMHEGPSAAQLGLPARPPEAEEVAVARLLELAKHAGCPVHICHISTKESLELIVKAK 233 (411)
T ss_pred HHcCCEEEEecCCHHHHhhh---hhcCCcccHhhCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHH
Confidence 99999999999998876543 566788888999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhh
Q psy10113 273 KELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKEL 352 (596)
Q Consensus 273 ~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~ 352 (596)
++ |+ .+++|++++||.++..++.. ....+.++||+|. .+++++||+++..|...+++|||+|+...+|..
T Consensus 234 ~~----g~--~v~~ev~ph~L~~~~~~~~~---~~~~~k~~Pplr~-~~~~~~L~~~l~~g~i~~i~sDh~p~~~~~k~~ 303 (411)
T TIGR00857 234 SQ----GI--KITAEVTPHHLLLSEEDVAR---LDGNGKVNPPLRE-KEDRLALIEGLKDGIIDIIATDHAPHTLEEKTK 303 (411)
T ss_pred Hc----CC--cEEEeechhhheecHHHHhC---CCccEEEcCCCCC-HHHHHHHHHHHhcCCCcEEEcCCCCCChHHccC
Confidence 99 99 99999999999999877643 3456789999997 688999999999999999999999999877653
Q ss_pred CCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCC
Q psy10113 353 GKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAK 432 (596)
Q Consensus 353 g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~ 432 (596)
+|...|+|++|+|..++.+|+.+ ..++++++++++++|.|||++||+ +++|+|++|++||||+||++..++++.+
T Consensus 304 ---~~~~~~~G~~g~e~~~~~~~~~~-~~~~~~~~~~~~~~t~~pa~~~g~-~~~G~l~~G~~ADlvi~d~~~~~~~~~~ 378 (411)
T TIGR00857 304 ---EFAAAPPGIPGLETALPLLLQLL-VKGLISLKDLIRMLSINPARIFGL-PDKGTLEEGNPADITVFDLKKEWTINAE 378 (411)
T ss_pred ---CHhhCCCCceeHHHHHHHHHHHH-HhCCCCHHHHHHHHhHHHHHHhCC-CCCCccCCCCcCCEEEEcCCCCEEEchH
Confidence 79999999999999999999654 456899999999999999999999 5569999999999999999999999998
Q ss_pred CccCCCCCCcccCeEeeeeEEEEEECCEEEEEC
Q psy10113 433 THAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE 465 (596)
Q Consensus 433 ~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~d 465 (596)
.+++...++||+|+++.|+|..||++|++||+|
T Consensus 379 ~~~~~~~~sp~~g~~~~g~v~~tiv~G~~v~~~ 411 (411)
T TIGR00857 379 TFYSKAKNTPFEGMSLKGKPIATILRGKVVYED 411 (411)
T ss_pred HCccCCCCCCcCCCEEEeEEEEEEECCEEEecC
Confidence 889999999999999999999999999999986
No 24
>PRK04250 dihydroorotase; Provisional
Probab=100.00 E-value=2.7e-54 Score=459.42 Aligned_cols=394 Identities=25% Similarity=0.338 Sum_probs=328.6
Q ss_pred ccEEEcCCCceeeeEEEECCeEEEecc-CCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHHHHHhC
Q psy10113 25 NGKVVNADKISDLDIYIENGVIQQLGR-NLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAG 103 (596)
Q Consensus 25 ng~Iv~~d~~~~~dV~IedG~I~~Ig~-~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~ 103 (596)
+++|++++...+++|+|+||+|.+|++ .. .+.++||+.|++|+|||||+|+|+..+ +....+++.+++++++++
T Consensus 3 ~~~v~~~~~~~~~~i~i~~G~I~~i~~~~~---~~~~~iD~~g~~v~PG~ID~HvH~~~~--~~~~~e~~~~~~~aa~~g 77 (398)
T PRK04250 3 EGKFLLKGRIVEGGIGIENGRISKISLRDL---KGKEVIKVKGGIILPGLIDVHVHLRDF--EESYKETIESGTKAALHG 77 (398)
T ss_pred eEEEEECCcEEEEEEEEECCEEEEeeCCCC---CCCeEEECCCCEEccCEEeccccccCC--CCCcHHHHHHHHHHHHhC
Confidence 578888777778999999999999973 22 356899999999999999999999543 235678999999999999
Q ss_pred CceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHH
Q psy10113 104 GTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDG 183 (596)
Q Consensus 104 GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~ 183 (596)
||||++|+....+.....+.++.+.+.+...+++||+++. .+..+ .+++.++.. .++|.|+.+.... +..+
T Consensus 78 GvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~---~~~l~~l~~----~~~k~f~~~~~~~-~~~~ 148 (398)
T PRK04250 78 GITLVFDMPNTKPPIMDEKTYEKRMRIAEKKSYADYALNF-LIAGN---CEKAEEIKA----DFYKIFMGASTGG-IFSE 148 (398)
T ss_pred CeEEEEECCCCCCCCCcHHHHHHHHHHhCcCceeeEEEEE-ecCCC---HHHHHHHHh----hheEEEEecCCCc-hhHH
Confidence 9999999987666677888899988888888999999997 54332 334555532 2578888653221 1222
Q ss_pred HHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHH
Q psy10113 184 ELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKA 263 (596)
Q Consensus 184 ~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~ 263 (596)
.+... ..+.+..+.+|+|+.+++. ...++|...|.+++.+++.+++..++++|++|+++.+
T Consensus 149 ~~~~~---~~~~~~~v~~H~E~~~~~~----------------~~~~~p~~aE~~av~r~~~la~~~~~~lhi~HvSt~~ 209 (398)
T PRK04250 149 NFEVD---YACAPGIVSVHAEDPELIR----------------EFPERPPEAEVVAIERALEAGKKLKKPLHICHISTKD 209 (398)
T ss_pred HHHHH---HHhcCCeEEEEecChhhhh----------------cccCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHH
Confidence 22221 2233567999999987643 1247899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCcee-eEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCC
Q psy10113 264 AGDAMAYKRKELMKKGKHCT-LYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDN 342 (596)
Q Consensus 264 ~~~~i~~a~~~~~~~G~~~~-v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~ 342 (596)
+.++|++ . |+ . |++|+|++||.++..++ . .+..+.++||||. .+++++||+.|. .+.+++|||
T Consensus 210 ~~~~i~~---~----g~--~~vt~Ev~ph~L~l~~~~~-~---~~~~~k~~PPLR~-~~d~~aL~~~l~--~Id~i~sDH 273 (398)
T PRK04250 210 GLKLILK---S----NL--PWVSFEVTPHHLFLTRKDY-E---RNPLLKVYPPLRS-EEDRKALWENFS--KIPIIASDH 273 (398)
T ss_pred HHHHHHH---c----CC--CcEEEEeCHHHhccCHHHH-C---CCCceEEcCCCCC-HHHHHHHHHhhc--cCCEEEcCC
Confidence 9998853 4 87 7 99999999999999887 2 3567889999998 689999999996 499999999
Q ss_pred CCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEc
Q psy10113 343 CTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWN 422 (596)
Q Consensus 343 ~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d 422 (596)
+|++...|. ..|+|++|+|..++++|. ++..+.|+++++++++|.|||++||+ +++| |++|++|||+|+|
T Consensus 274 aP~~~~~k~-------~~~~G~~g~e~~lpl~~~-~v~~~~lsl~~~v~~~t~npAk~lgl-~~~G-L~~G~~ADlvi~D 343 (398)
T PRK04250 274 APHTLEDKE-------AGAAGIPGLETEVPLLLD-AANKGMISLFDIVEKMHDNPARIFGI-KNYG-IEEGNYANFAVFD 343 (398)
T ss_pred cccCHHHhh-------cCCCCcchHHHHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHHhCC-CCcC-ccCCCcCCEEEEc
Confidence 999988764 247999999999999996 78889999999999999999999999 6689 9999999999999
Q ss_pred CCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeee
Q psy10113 423 YKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYL 478 (596)
Q Consensus 423 ~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~ 478 (596)
++..++++.+.+++...|+||+|+++.|+|..||++|++||++|++.... .|+++
T Consensus 344 ~~~~~~v~~~~~~s~~~~sp~~g~~l~g~v~~tiv~G~~v~~~g~~~~~~-~G~~~ 398 (398)
T PRK04250 344 MKKEWTIKAEELYTKAGWTPYEGFKLKGKVIMTILRGEVVMEDDEIIGKP-RGVRI 398 (398)
T ss_pred CCCcEEEChhhccccCCCCCCCCCEEeeEEEEEEECCEEEEECCEEcCCC-CCeEC
Confidence 99999999999999999999999999999999999999999999986543 77764
No 25
>PRK00369 pyrC dihydroorotase; Provisional
Probab=100.00 E-value=9.4e-54 Score=452.75 Aligned_cols=389 Identities=20% Similarity=0.226 Sum_probs=322.2
Q ss_pred ccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEc-CCCEEeeCccccccCCCccccCCCCcchHHHHH
Q psy10113 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDA-AGSYVIPGGIDPHTHFELELMGATSVDDFYHGT 97 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa-~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~ 97 (596)
|.++|+|..+++ +..|.+++|+|..|++.. +.+.++||+ +|++|+|||||+|+|+..|. ....++|++++
T Consensus 1 ~~~~i~g~~~~~-----~~~~~~~~~~~~~i~~~~--~~~~~~id~~~G~~vlPG~ID~HvH~r~pg--~~~~ed~~sgs 71 (392)
T PRK00369 1 MILWIKGKAYLG-----KEIKEICINFDRRIKEIK--SRCKPDLDLPQGTLILPGAIDLHVHLRGLK--LSYKEDVASGT 71 (392)
T ss_pred CcEEEECCcccC-----CceEEEeeeeeeeEeecc--CCCCceeecCCCCEEeCCEEEcccccCCCC--CcccccHHHHH
Confidence 457777553332 356788889998888752 447889999 69999999999999998764 46789999999
Q ss_pred HHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCC
Q psy10113 98 KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGL 177 (596)
Q Consensus 98 ~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~ 177 (596)
++|++||||||+||....+..+..+.++.+.+.+..++++||+++...+... +++. +.|+.+||.|.. +
T Consensus 72 ~AAa~GGvTtv~~mPnt~P~~~~~~~l~~~~~~a~~~~~vd~~~~~~~~~~~----~el~----~~~~~g~k~f~~--~- 140 (392)
T PRK00369 72 SEAAYGGVTLVADMPNTIPPLNTPEAITEKLAELEYYSRVDYFVYSGVTKDP----EKVD----KLPIAGYKIFPE--D- 140 (392)
T ss_pred HHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCCeEEEEEEeeccCCH----HHHH----HhhCceEEEECC--C-
Confidence 9999999999999987777778899999999999988999999998664422 2343 238889998852 1
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEE
Q psy10113 178 YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVV 257 (596)
Q Consensus 178 ~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~ 257 (596)
..+ .++++.+.+.+.++.+|||+.+++... +...+|...|.+++.+++.+ +|+|++
T Consensus 141 --~~~---~~~~~~~~~~~~~v~~HaE~~~l~~~~--------------~~~~rp~~aE~~ai~~~~~~-----~~lhi~ 196 (392)
T PRK00369 141 --LER---EETFRVLLKSRKLKILHPEVPLALKSN--------------RKLRRNCWYEIAALYYVKDY-----QNVHIT 196 (392)
T ss_pred --Cch---HHHHHHHHHhCCEEEEeCCCHHHhhcc--------------hhcccCHHHHHHHHHHHHHh-----CCEEEE
Confidence 122 334455556669999999998765421 23468888888888777766 899999
Q ss_pred ecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccE
Q psy10113 258 HIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQT 337 (596)
Q Consensus 258 hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~ 337 (596)
|+++.++ ++.+|++ | +++|++++||.++... ...+.++||||. .+++++||+.|.+ +.+
T Consensus 197 HvSt~~~---v~~ak~~----g----vt~Ev~pHhL~l~~~~-------~~~~k~~PPLR~-~~dr~aL~~~l~~--id~ 255 (392)
T PRK00369 197 HASNPRT---VRLAKEL----G----FTVDITPHHLLVNGEK-------DCLTKVNPPIRD-INERLWLLQALSE--VDA 255 (392)
T ss_pred ECCCHHH---HHHHHHC----C----CeEEechhHheeccCC-------CCceEEeCCCCC-HHHHHHHHHHHHh--CCE
Confidence 9999885 4556666 4 5779999999998752 235789999998 6999999999998 999
Q ss_pred EeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCcc
Q psy10113 338 TGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDAD 417 (596)
Q Consensus 338 ~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~AD 417 (596)
++|||+|+...+|.. +|.++|+|++|+|..++++|. ++..+.++++++++++|.|||++||+. .|.|++|++||
T Consensus 256 i~SDHaP~~~~~K~~---~f~~~~~Gi~GlE~~lpll~~-~v~~~~lsl~~~v~~~s~nPA~ilgl~--~g~i~~G~~AD 329 (392)
T PRK00369 256 IASDHAPHSSFEKLQ---PYEVCPPGIAALSFTPPFIYT-LVSKGILSIDRAVELISTNPARILGIP--YGEIKEGYRAN 329 (392)
T ss_pred EEeCCCCCCHHHccC---CHhhCCCCCeeHHHHHHHHHH-HHHcCCCCHHHHHHHHHHHHHHHhCCC--CCccCCCCccC
Confidence 999999999888743 799999999999999999997 777899999999999999999999994 48899999999
Q ss_pred EEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecCC
Q psy10113 418 IVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTH 481 (596)
Q Consensus 418 lVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~~ 481 (596)
||+||++ .+++ +..++...|+||+|+.+.|+|..||++|++||++|++...+|.|+|=+|+
T Consensus 330 lvi~d~~-~~~~--~~~~sk~~~sp~~G~~l~G~v~~ti~~G~~v~~~~~~~~~~g~G~~~~~~ 390 (392)
T PRK00369 330 FTVIQFE-DWRY--STKYSKVIETPLDGFELKASVYATIVQGKLAYLEGEVFPVKGINPFGERK 390 (392)
T ss_pred EEEEeCC-ceeE--ccccccCCCCCCCCCEeeeEEEEEEECCEEEEECCeEecCCCCCCCCccc
Confidence 9999998 5664 56788999999999999999999999999999999999999999987765
No 26
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=100.00 E-value=6.5e-51 Score=428.82 Aligned_cols=360 Identities=28% Similarity=0.405 Sum_probs=315.1
Q ss_pred CCEEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc
Q psy10113 66 GSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI 145 (596)
Q Consensus 66 G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 145 (596)
|++|+||+||+|+|+..| +....++|.+++++|++||||||+||....+..+..+.++...+.+...+++||+++..+
T Consensus 1 G~~vlPG~iD~HvH~r~p--g~~~~ed~~s~t~aA~~GGvTtv~~mPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~~ 78 (361)
T cd01318 1 GLLILPGVIDIHVHFREP--GLTYKEDFVSGSRAAAAGGVTTVMDMPNTKPPTTTAEALYEKLRLAAAKSVVDYGLYFGV 78 (361)
T ss_pred CCEEecCeeEeeecCCCC--CCCccCcHHHHHHHHHcCCCEEEEECCCCCCCCCcHHHHHHHHHHhccCceeEEEEEEee
Confidence 789999999999999876 456789999999999999999999998777777888899999888888889999999887
Q ss_pred cCCChhHHHHHHHHHHHcCCCEEEEEeecCC-CccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCC
Q psy10113 146 TWWSDQVQQEMAELCEKHGVNSFKTFMAYKG-LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGP 224 (596)
Q Consensus 146 ~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~-~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~ 224 (596)
+.. +++.++.. .|+.+||.|+.+.. ....++..|+++++.+. .++.+|+|+.+++.....+....+
T Consensus 79 ~~~-----~~l~~~~~-~~~~g~k~f~~~~~~~~~~~~~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~---- 145 (361)
T cd01318 79 TGS-----EDLEELDK-APPAGYKIFMGDSTGDLLDDEETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGES---- 145 (361)
T ss_pred cCh-----hhHHHHHH-hhCcEEEEEEecCCCCcCCCHHHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhcc----
Confidence 554 35555543 48999999986532 22357888999998875 789999999988765554444333
Q ss_pred CcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCcc
Q psy10113 225 EGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTW 304 (596)
Q Consensus 225 ~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~ 304 (596)
+|..++|...|..++.+++.+++..++++|++|+++.++.++|+.+| . .|++|++++||.++...+..
T Consensus 146 -~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~Hvs~~~~~~~i~~~k-------~--~vt~ev~ph~L~l~~~~~~~-- 213 (361)
T cd01318 146 -AHPRIRDAEAAAVATARALKLARRHGARLHICHVSTPEELKLIKKAK-------P--GVTVEVTPHHLFLDVEDYDR-- 213 (361)
T ss_pred -CCCCcCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHhC-------C--CeEEEeCHHHhhcCHHHHhc--
Confidence 67888999999999999999999999999999999999999988775 3 89999999999998877642
Q ss_pred ccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCC
Q psy10113 305 HDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGIL 384 (596)
Q Consensus 305 ~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l 384 (596)
.+..+.++||+|. .+++++||+++++|.+.+++|||+|+....|.. +|...|+|+.|+|..+++++. ++..+++
T Consensus 214 -~~~~~k~~PPlr~-~~d~~aL~~~l~~G~id~i~SDh~P~~~~~k~~---~~~~a~~G~~g~e~~l~~~~~-~v~~~~l 287 (361)
T cd01318 214 -LGTLGKVNPPLRS-REDRKALLQALADGRIDVIASDHAPHTLEEKRK---GYPAAPSGIPGVETALPLMLT-LVNKGIL 287 (361)
T ss_pred -CCCeEEEeCCCCC-HHHHHHHHHHHhCCCCCEEeeCCCCCCHHHccC---ChhhCCCCCccHHHHHHHHHH-HHHcCCC
Confidence 3457789999998 688999999999999999999999999887764 699999999999999999985 6778899
Q ss_pred CHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECC
Q psy10113 385 SPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGG 459 (596)
Q Consensus 385 ~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~G 459 (596)
+++++++++|.|||++||+ +++|+|++|++|||||||++..++++.+.+++.+.++||+|+++.|+|..||++|
T Consensus 288 ~l~~a~~~~t~nPA~~lgl-~~~G~i~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~tp~~G~~l~G~v~~t~~~G 361 (361)
T cd01318 288 SLSRVVRLTSHNPARIFGI-KNKGRIAEGYDADLTVVDLKEERTIRAEEFHSKAGWTPFEGFEVTGFPVMTIVRG 361 (361)
T ss_pred CHHHHHHHHhHHHHHHhCC-CCCCccCCCCcCCEEEEeCCCCEEECHHHccccCCCCCCCCCEEeeEEEEEEeCc
Confidence 9999999999999999999 5689999999999999999999999999999999999999999999999999998
No 27
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=100.00 E-value=1.9e-50 Score=429.02 Aligned_cols=372 Identities=22% Similarity=0.286 Sum_probs=327.6
Q ss_pred CeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceee
Q psy10113 59 VRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCD 138 (596)
Q Consensus 59 ~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 138 (596)
.++||++|++|+||+||+|+|+..+. ....+++.+++++|+++|||||+|+....+..+..+.++.+++.+....+++
T Consensus 2 ~~~iD~~g~~vlPG~iD~HvH~~~~~--~~~~e~~~s~s~aA~~GGvTtii~~p~~~p~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
T cd01317 2 AEVIDAEGKILAPGLVDLHVHLREPG--FEYKETLESGAKAAAAGGFTTVVCMPNTNPVIDNPAVVELLKNRAKDVGIVR 79 (374)
T ss_pred CeEEECCCCEEecCEEeeccccCCCC--ccccchHHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHHHHhccCCcee
Confidence 57899999999999999999997764 3467899999999999999999999877777788888888888888777778
Q ss_pred eeccccccCCChh-HHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHH
Q psy10113 139 YALHVGITWWSDQ-VQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLL 217 (596)
Q Consensus 139 ~~~~~~~~~~~~~-~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~ 217 (596)
+.++..++.+... ..+++..+.+ .|+.+||.+ +....++..++++++.++++|.++.+|+|+..++.. .+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~i~~l~~-~G~~~~k~~----~~~~~~~~~l~~~~~~~~~~g~~v~~H~E~~~~~~~---~~~ 151 (374)
T cd01317 80 VLPIGALTKGLKGEELTEIGELLE-AGAVGFSDD----GKPIQDAELLRRALEYAAMLDLPIIVHPEDPSLAGG---GVM 151 (374)
T ss_pred EEEEEEEeeCCCcccHHHHHHHHH-CCcEEEEcC----CcCCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhc---cCc
Confidence 8777777766544 4778888864 699999843 223468889999999999999999999999876542 244
Q ss_pred HcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCC
Q psy10113 218 AAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHA 297 (596)
Q Consensus 218 ~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~ 297 (596)
..|...++.+...+|...|..++.+++.++++.++++|+.|+++.+..+.+.++++. |+ .+++|+++++|.++.
T Consensus 152 ~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~i~i~h~ss~~~l~~i~~~~~~----G~--~~~~e~~~h~L~ld~ 225 (374)
T cd01317 152 NEGKVASRLGLPGIPPEAETIMVARDLELAEATGARVHFQHLSTARSLELIRKAKAK----GL--PVTAEVTPHHLLLDD 225 (374)
T ss_pred cCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHC----CC--CEEEEecHHHHhcCH
Confidence 566667777788999999999999999999999999999999999999999999998 99 999999999999999
Q ss_pred CCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHh
Q psy10113 298 NQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEK 377 (596)
Q Consensus 298 ~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~ 377 (596)
.++.. ....++++||+|. ..+++.||+++.+|.++++||||++++...+.. +|+..|.|++|++..|+.+++.
T Consensus 226 ~~~~~---~~~~~k~~Pplr~-~~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~---~~~~~~~Gi~g~e~~l~~~~~~ 298 (374)
T cd01317 226 EALES---YDTNAKVNPPLRS-EEDREALIEALKDGTIDAIASDHAPHTDEEKDL---PFAEAPPGIIGLETALPLLWTL 298 (374)
T ss_pred HHHhc---cCCceEEcCCCCC-HHHHHHHHHHHhcCCceEEEcCCCCCCHHHccC---CHhhCCCcHhHHHHHHHHHHHH
Confidence 88643 3456788999996 568999999999999999999999999887754 6899999999999999999999
Q ss_pred hccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEE
Q psy10113 378 GVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYV 455 (596)
Q Consensus 378 ~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~V 455 (596)
++..+.++++++++++|.|||++||++ .|+|++|++|||++||++.+++++.+.+++...|+||+|++++|+|..|
T Consensus 299 ~~~~~~~~~~~~~~~~t~npA~~lgl~--~G~l~~G~~ADlvi~d~~~~~~~~~~~~~s~~~~sp~~G~~l~g~~~~t 374 (374)
T cd01317 299 LVKGGLLTLPDLIRALSTNPAKILGLP--PGRLEVGAPADLVLFDPDAEWIVDEETFRSKSKNTPFDGQKLKGRVLAT 374 (374)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHhCCC--CCcccCCCcCCEEEECCCCCEEEChhhccccCCCCCCCCCEEeEEEEEC
Confidence 998899999999999999999999995 4999999999999999999999999999999999999999999999764
No 28
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=100.00 E-value=8.2e-50 Score=417.68 Aligned_cols=335 Identities=31% Similarity=0.447 Sum_probs=297.2
Q ss_pred CEEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccccc
Q psy10113 67 SYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGIT 146 (596)
Q Consensus 67 ~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 146 (596)
++|+||+||+|+|+..|... ...++|.+++++|++||||||+||....+..+..+.++.+.+.+..++++||+++..++
T Consensus 1 ~~vlPG~iD~HvH~r~pg~~-~~~e~~~t~t~aA~~GG~Ttv~~mpn~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~ 79 (337)
T cd01302 1 LLVLPGFIDIHVHLRDPGGT-TYKEDFESGSRAAAAGGVTTVIDMPNTGPPPIDLPAIELKIKLAEESSYVDFSFHAGIG 79 (337)
T ss_pred CEecCCeeEeeeccCCCCCC-CchhHHHHHHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHhCcCcEeeEEEEEecc
Confidence 58999999999999887644 46899999999999999999999987777777888999988888888899999998887
Q ss_pred CCChhHHHHHHHHHHHcCCCEEEEEeecCCCc--cCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCC
Q psy10113 147 WWSDQVQQEMAELCEKHGVNSFKTFMAYKGLY--MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGP 224 (596)
Q Consensus 147 ~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~--~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~ 224 (596)
.+. ..+++.++. +.|+.+||+|+.|.... ..+++++.++++.++++|.++.+|+|
T Consensus 80 ~~~--~~~el~~l~-~~Gv~g~K~f~~~~~~~~~~~~~~~l~~~~~~~~~~g~~v~~H~E-------------------- 136 (337)
T cd01302 80 PGD--VTDELKKLF-DAGINSLKVFMNYYFGELFDVDDGTLMRTFLEIASRGGPVMVHAE-------------------- 136 (337)
T ss_pred Ccc--CHHHHHHHH-HcCCcEEEEEEeccCCCccccCHHHHHHHHHHHHhcCCeEEEeHH--------------------
Confidence 642 456777775 46999999999764322 57899999999999999999999988
Q ss_pred CcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCcc
Q psy10113 225 EGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTW 304 (596)
Q Consensus 225 ~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~ 304 (596)
+++.++++.++++|+.|+++.++.+.|+.++++ |+ .|++|+++++|.++..++..
T Consensus 137 -----------------r~~~la~~~g~~l~i~Hiss~~~le~i~~ak~~----g~--~vt~ev~ph~L~l~~~~~~~-- 191 (337)
T cd01302 137 -----------------RAAQLAEEAGANVHIAHVSSGEALELIKFAKNK----GV--KVTCEVCPHHLFLDESMLRL-- 191 (337)
T ss_pred -----------------HHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHC----CC--cEEEEcChhhheeCHHHhhC--
Confidence 456678889999999999999999999999999 99 99999999999998877632
Q ss_pred ccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCC
Q psy10113 305 HDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGIL 384 (596)
Q Consensus 305 ~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l 384 (596)
....+.++||+|. .+++++||+.++.|.+.+++|||+|++...|..+ .+|+.+|+|++|+|..++.+|+.++. +++
T Consensus 192 -~~~~~k~~Pplr~-~~~~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~-~~~~~a~~G~~g~e~~l~~~~~~~~~-~~i 267 (337)
T cd01302 192 -NGAWGKVNPPLRS-KEDREALWEGVKNGKIDTIASDHAPHSKEEKESG-KDIWKAPPGFPGLETRLPILLTEGVK-RGL 267 (337)
T ss_pred -CCceEEEeCCCCC-HHHHHHHHHHHhCCCCCEEecCCCCCCHHHhccC-CCcccCCCCcccHHHHHHHHHHHHHh-cCC
Confidence 2445679999998 6889999999999999999999999998887654 47999999999999999999998775 469
Q ss_pred CHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEE
Q psy10113 385 SPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYV 455 (596)
Q Consensus 385 ~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~V 455 (596)
+++++++++|.|||++||+++ +|+|++|++|||||||++..++++.+.+++.+.|+||+|+++.|+|..|
T Consensus 268 ~~~~~~~~~s~~pA~~~gl~~-~g~i~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~t 337 (337)
T cd01302 268 SLETLVEILSENPARIFGLYP-KGTIAVGYDADLVIVDPKKEWKVTAEEIESKADWTPFEGMEVTGKPVST 337 (337)
T ss_pred CHHHHHHHHHHHHHHHcCCCC-CCccccCCcCCEEEEeCCCcEEEcHHHhcccCCCCCcCCcEEEEEEEEC
Confidence 999999999999999999954 6999999999999999999999999999999999999999999999765
No 29
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=100.00 E-value=2.8e-47 Score=397.07 Aligned_cols=342 Identities=22% Similarity=0.287 Sum_probs=285.2
Q ss_pred CEEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccccc
Q psy10113 67 SYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGIT 146 (596)
Q Consensus 67 ~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 146 (596)
.+|+||+||+|+|+..|. ....++|.+++++|++||||||+||....+.....+.++.+.+.+...+++||++|..++
T Consensus 2 ~~vlPG~ID~HvH~r~pg--~~~~ed~~sgs~AAa~GGvTtv~dmPnt~P~~~~~~~~~~~~~~a~~~s~vd~~~~~~~~ 79 (344)
T cd01316 2 TIRLPGLIDVHVHLREPG--ATHKEDFASGTKAALAGGFTMVRAMPNTNPSIVDVASLKLVQSLAQAKARCDYAFSIGAT 79 (344)
T ss_pred eEEeCCeEEeeeccCCCC--cCCcChHHHHHHHHHhCCCeEEEECCCCCCCCCCHHHHHHHHHHhccCcEEeEEEEeeec
Confidence 479999999999998884 467899999999999999999999987667677888999999998888899999998887
Q ss_pred CCChhHHHHHHHHHHHcCCCEEEEEeecCCCc-cCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCC
Q psy10113 147 WWSDQVQQEMAELCEKHGVNSFKTFMAYKGLY-MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPE 225 (596)
Q Consensus 147 ~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~-~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~ 225 (596)
.++... +.++.. .+.+||.|+.+.... ...+.........+...+.++.+|+++
T Consensus 80 ~~~~~~---~~~l~~--~~~g~k~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~e~-------------------- 134 (344)
T cd01316 80 STNAAT---VGELAS--EAVGLKFYLNETFSTLILDKITAWASHFNAWPSTKPIVTHAKS-------------------- 134 (344)
T ss_pred CCCHHH---HHHHHh--ccCeEEEEECCCCCCCccchHHHHHHHHHhcccCCCeEEehhh--------------------
Confidence 766443 344432 367899998642111 122322223333333446666777665
Q ss_pred cccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccc
Q psy10113 226 GHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWH 305 (596)
Q Consensus 226 ~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~ 305 (596)
..+.+++.+++..++++|++|+++.+++++|+++|++ |+ .|++|+|++||.++..++..
T Consensus 135 ------------~~~~~~l~la~~~g~~lhi~HiSt~~~~~~i~~ak~~----g~--~vt~ev~phhL~l~~~~~~~--- 193 (344)
T cd01316 135 ------------QTLAAVLLLASLHNRSIHICHVSSKEEINLIRLAKAR----GL--KVTCEVSPHHLFLSQDDLPR--- 193 (344)
T ss_pred ------------HHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHHHC----CC--cEEEEechHHeeccHHHhhc---
Confidence 3445678899999999999999999999999999999 99 99999999999999887643
Q ss_pred cccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCC
Q psy10113 306 DQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILS 385 (596)
Q Consensus 306 ~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~ 385 (596)
..+.++||||. .+++++||+++. .+.+++|||+|+....|.. ...|+|++|+|..++++|+ ++..++++
T Consensus 194 --~~~k~~PPLR~-~~dr~aL~~~l~--~id~i~SDHaP~~~~~K~~-----~~a~~G~~g~e~~lpl~~~-~v~~~~i~ 262 (344)
T cd01316 194 --GQYEVRPFLPT-REDQEALWENLD--YIDCFATDHAPHTLAEKTG-----NKPPPGFPGVETSLPLLLT-AVHEGRLT 262 (344)
T ss_pred --CCceeCCCCcC-HHHHHHHHHHHh--cCCEEEcCCCCCCHHHhcC-----CCCCCCcccHHHHHHHHHH-HHHcCCCC
Confidence 35779999997 789999999995 5899999999998877742 2789999999999999997 78899999
Q ss_pred HHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEEC
Q psy10113 386 PEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE 465 (596)
Q Consensus 386 ~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~d 465 (596)
+.++++++|.||||+||+++. .+||||+|++..++++.+.+++...|+||+|++++|+|..||++|++||++
T Consensus 263 l~~l~~~~s~nPAk~~gl~~~--------~~~lvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~ti~rG~~v~~~ 334 (344)
T cd01316 263 IEDIVDRLHTNPKRIFNLPPQ--------SDTYVEVDLDEEWTIPKNPLQSKKGWTPFEGKKVKGKVQRVVLRGETAFID 334 (344)
T ss_pred HHHHHHHHHHhHHHHhCCCCC--------CCCEEEEeCCCcEEEChhhccccCCCCCCCCCEEeeEEEEEEECCEEEEEC
Confidence 999999999999999999763 236999999999999999999999999999999999999999999999999
Q ss_pred CceeecCCCC
Q psy10113 466 GNLRVAQGQG 475 (596)
Q Consensus 466 G~~~~~~g~g 475 (596)
|++...+|.|
T Consensus 335 g~~~~~~~~G 344 (344)
T cd01316 335 GEIVAPPGFG 344 (344)
T ss_pred CEEccCCCCC
Confidence 9987766655
No 30
>PRK09061 D-glutamate deacylase; Validated
Probab=100.00 E-value=1e-43 Score=389.47 Aligned_cols=400 Identities=20% Similarity=0.192 Sum_probs=304.7
Q ss_pred cccEEEEccEEEcCCCc--eeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHH
Q psy10113 18 QNRLLIKNGKVVNADKI--SDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYH 95 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~--~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~ 95 (596)
.++++|+|++|+|++.. ..++|+|+||+|++|++... .+.++||++|++|+|||||+|+|...+.
T Consensus 18 ~~~~li~~~~vid~~~~~~~~~~v~I~~G~I~~ig~~~~--~~~~viD~~g~~v~PG~ID~H~H~~~~~----------- 84 (509)
T PRK09061 18 PYDLVIRNGRVVDPETGLDAVRDVGIKGGKIAAVGTAAI--EGDRTIDATGLVVAPGFIDLHAHGQSVA----------- 84 (509)
T ss_pred cCCEEEECcEEEeCCCCeeccceEEEECCEEEEecCCCC--CCCeEEeCCCCEEecCeEeeeeCCCCCc-----------
Confidence 46899999999997554 34899999999999997532 3568999999999999999999985432
Q ss_pred HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccccc-------C-------------------CC
Q psy10113 96 GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGIT-------W-------------------WS 149 (596)
Q Consensus 96 g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-------~-------------------~~ 149 (596)
..+.++++|+||++++.. .. ....+.++. .......++|+++++.. . +.
T Consensus 85 ~~~~~~~~GvTtvv~~~~-~~-~p~~~~~~~---~~~~~~~vn~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (509)
T PRK09061 85 AYRMQAFDGVTTALELEA-GV-LPVARWYAE---QAGEGRPLNYGASVGWTPARIAVLTGPQAEGTIADFGKALGDPRWQ 159 (509)
T ss_pred cchhhccCCceeEEeecc-CC-CCHHHHHHH---HHhcCCcceeehhcCcHHHHHHHhCCcccccccccccccccccccc
Confidence 256678999999998731 11 122222222 22233457888776653 1 22
Q ss_pred -----hhHHHHHHHHHH---HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCC
Q psy10113 150 -----DQVQQEMAELCE---KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGI 221 (596)
Q Consensus 150 -----~~~~~e~~~lv~---~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi 221 (596)
.+..++|.++++ +.|+.+|+.++.|. ...++++|.++++.|+++|.++.+|+++...+.
T Consensus 160 ~~~~t~~el~~m~~ll~~al~~Ga~gis~~~~y~--p~~~~~eL~~l~~~A~~~g~~v~~H~e~~~~~~----------- 226 (509)
T PRK09061 160 ERAATPAELAEILELLEQGLDEGALGIGIGAGYA--PGTGHKEYLELARLAARAGVPTYTHVRYLSNVD----------- 226 (509)
T ss_pred cCCCCHHHHHHHHHHHHHHHHCCCCEEecCCccC--CCCCHHHHHHHHHHHHHcCCEEEEEecCcccCC-----------
Confidence 344566777776 47999998876653 246999999999999999999999999865310
Q ss_pred CCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCc------HHHHHHHHHHHHHHhhcCCceeeEEeeccce---
Q psy10113 222 KGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMS------KAAGDAMAYKRKELMKKGKHCTLYGETLAAA--- 292 (596)
Q Consensus 222 ~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s------~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~--- 292 (596)
...|.+++.+++.++++.++|+|+.|+++ ....+.|+++++. |+ .|++|+++++
T Consensus 227 -----------~~~e~~av~~~i~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~Ar~~----Gi--~Vt~e~~P~~~~~ 289 (509)
T PRK09061 227 -----------PRSSVDAYQELIAAAAETGAHMHICHVNSTSLRDIDRCLALVEKAQAQ----GL--DVTTEAYPYGAGS 289 (509)
T ss_pred -----------chhHHHHHHHHHHHHHHhCCCEEEEeeccCCcccHHHHHHHHHHHHHc----CC--cEEEEecCcchhh
Confidence 23456788999999999999999999998 8889999999999 99 9999999999
Q ss_pred -----eecCCCCCCCcccccc-cccc---CCCCCC---------------------C---CCcHHHHHHHHhcCCccEEe
Q psy10113 293 -----VGTHANQIPCTWHDQA-AHVL---SPPLRP---------------------D---ETTPTHLLTLLNENALQTTG 339 (596)
Q Consensus 293 -----l~~~~~~~~~~~~~~~-~~~~---~Pplr~---------------------~---~~~~~~l~~~l~~G~~~~~g 339 (596)
+.++...... +.... ...+ .||||. . ..+.+.++..+..+.. +++
T Consensus 290 t~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~p~~-~i~ 367 (509)
T PRK09061 290 TVVGAAFFDPGWLER-MGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSVLFPGA-AIA 367 (509)
T ss_pred hhhcccccCHHHHHH-hCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHhCCCCc-eEe
Confidence 4442211110 10000 1133 888876 1 3457889999998877 999
Q ss_pred CCCCCCChhhhhhCCCCCCcCCCCCcchH------HHHHHHHHhhccC-CCCCHHHHHHHHhHhHHHHcC-----CCCCc
Q psy10113 340 SDNCTFNKNQKELGKDSFTHIPNGVNGVQ------DRLSVIWEKGVVP-GILSPEKFVAVTSTNAAKIFN-----LYPKK 407 (596)
Q Consensus 340 sD~~~~~~~~~~~g~~~f~~~p~G~~g~e------~~~~~~~~~~v~~-~~l~~~e~v~~~T~n~Ak~lg-----l~~~~ 407 (596)
|||+|+....+. ++|...|.|..+.+ ..++..+.+++.. +.++++++++++|.+||++|| + +.+
T Consensus 368 sD~~p~~~~~~~---~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~v~~~~~isl~~ai~~~T~~pA~~lg~~~~~l-~~~ 443 (509)
T PRK09061 368 SDAMPWTWSDGT---VYEGDAWPLPEDAVSHPRSAGTFARFLREYVRERKALSLLEAIRKCTLMPAQILEDSVPAM-RRK 443 (509)
T ss_pred cCCccccccccc---cccccccccccCCCCCchhhcchHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhccccccc-cCC
Confidence 999999877664 47899999988877 7788888887776 469999999999999999999 7 457
Q ss_pred ccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceeecCCCCeeecCC
Q psy10113 408 GVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTH 481 (596)
Q Consensus 408 G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~~ 481 (596)
|+|++|++|||||||++... ...++++. ++|++| +.+||++|++||+||+++...+.||+|+++
T Consensus 444 G~i~~G~~ADlvv~D~~~~~--~~~~~~~~--~~~~~g------i~~v~v~G~~v~~~g~~~~~~~~G~~lr~~ 507 (509)
T PRK09061 444 GRLQAGADADIVVFDPETIT--DRATFEDP--NRPSEG------VRHVLVNGVPVVSNGELVRDARPGRPVRRP 507 (509)
T ss_pred EeeCCCCCcCEEEEchhhcc--cccccccc--CCCCCC------ceEEEECCEEEEECCEecCCCCCCeEecCC
Confidence 99999999999999988532 22233222 456666 589999999999999987667799999875
No 31
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=100.00 E-value=1e-43 Score=382.41 Aligned_cols=357 Identities=24% Similarity=0.295 Sum_probs=272.1
Q ss_pred cEEEEccEEEcCCC--ceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHH
Q psy10113 20 RLLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGT 97 (596)
Q Consensus 20 ~llIkng~Iv~~d~--~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~ 97 (596)
+++|+|++|+++.. ...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+..+... ..++
T Consensus 1 d~~i~n~~v~~~~~~~~~~~~i~I~~g~I~~i~~~~~-~~~~~~iD~~G~~v~PG~iD~H~H~~~~~~~-------~~~~ 72 (415)
T cd01297 1 DLVIRNGTVVDGTGAPPFTADVGIRDGRIAAIGPILS-TSAREVIDAAGLVVAPGFIDVHTHYDGQVFW-------DPDL 72 (415)
T ss_pred CEEEECCEEECCCCCccccceEEEECCEEEEEecCCC-CCCCeEEECCCCEEccCEeeeeecCCccccc-------Ccch
Confidence 47899999999754 357899999999999997543 2367899999999999999999999765321 2347
Q ss_pred HHHHhCCceEEecccc---CCCCc-----cHH-----------------HHHHHHHHHhccC-ceeeee---cccccc--
Q psy10113 98 KAAVAGGTTTIIDFAL---PRKGE-----SLI-----------------KTYESWRQKADEK-VCCDYA---LHVGIT-- 146 (596)
Q Consensus 98 ~~al~~GtTti~D~~~---~~~~~-----~~~-----------------~a~~~~~~~~~~~-~~~~~~---~~~~~~-- 146 (596)
++++++||||++++.. +.+.. ... +.++.+.+.+..+ ..++|+ +|..+.
T Consensus 73 ~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~~ 152 (415)
T cd01297 73 RPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWGWATFAEYLDALEARPPAVNVAALVGHAALRRA 152 (415)
T ss_pred hhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCCCCCHHHHHHHHHhcCCCcCeeeccCcHHHHHH
Confidence 8899999999998643 11111 111 4455666666443 578888 776555
Q ss_pred -------CCChhHHHHHHHHHH---HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHH
Q psy10113 147 -------WWSDQVQQEMAELCE---KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKL 216 (596)
Q Consensus 147 -------~~~~~~~~e~~~lv~---~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l 216 (596)
.+++...++|.++++ +.|+.+|+.++.|......++++++++++.++++|.++.+|+++.+
T Consensus 153 ~~g~~~~~~~~~~~~~~~~l~~~al~~Ga~g~~~~~~y~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~--------- 223 (415)
T cd01297 153 VMGLDAREATEEELAKMRELLREALEAGALGISTGLAYAPRLYAGTAELVALARVAARYGGVYQTHVRYEG--------- 223 (415)
T ss_pred HhCcCCCCCCHHHHHHHHHHHHHHHHCCCeEEEcccccCCcccCCHHHHHHHHHHHHHcCCEEEEEECccc---------
Confidence 345566788888874 3799999998877543457999999999999999999999999854
Q ss_pred HHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHH---------HHHHHHHHHHHhhcCCceeeEEe
Q psy10113 217 LAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAA---------GDAMAYKRKELMKKGKHCTLYGE 287 (596)
Q Consensus 217 ~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~---------~~~i~~a~~~~~~~G~~~~v~~e 287 (596)
..|.+++.+++.+++..++|+|+.|+++... .+.|++++.. |+ .|++|
T Consensus 224 -----------------~~e~~av~~~~~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~i~~a~~~----G~--~v~~e 280 (415)
T cd01297 224 -----------------DSILEALDELLRLGRETGRPVHISHLKSAGAPNWGKIDRLLALIEAARAE----GL--QVTAD 280 (415)
T ss_pred -----------------ccHHHHHHHHHHHHHHhCCCEEEEEEecCCCcccchHHHHHHHHHHHHHh----CC--cEEEE
Confidence 2246889999999999999999999999888 8999999999 99 99999
Q ss_pred eccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcch
Q psy10113 288 TLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGV 367 (596)
Q Consensus 288 ~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~ 367 (596)
++++++.. ...++.+++. ..++++|||++++. +....+ +
T Consensus 281 ~~p~~~~~---------------------------~~~~~~l~~~-~~~~i~SDh~~~~~--------~~~~~~----~- 319 (415)
T cd01297 281 VYPYGAGS---------------------------EDDVRRIMAH-PVVMGGSDGGALGK--------PHPRSY----G- 319 (415)
T ss_pred eCCCCCCc---------------------------HHHHHHHHcC-CCceeeeCCCcCCC--------CCcchh----C-
Confidence 99877543 2233455555 89999999998651 011111 1
Q ss_pred HHHHHHHHHhhccCC-CCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCe
Q psy10113 368 QDRLSVIWEKGVVPG-ILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGL 446 (596)
Q Consensus 368 e~~~~~~~~~~v~~~-~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~ 446 (596)
.++.+|.+++... .++++++++++|.|||++||++ ++|+|++|++|||||||++.....+ .++.+ .
T Consensus 320 --~~~~~l~~~~~~~~~~~~~~~~~~~t~~pA~~~gl~-~~G~l~~G~~ADlvv~d~~~~~~~~--------~~~~~--~ 386 (415)
T cd01297 320 --DFTRVLGHYVRERKLLSLEEAVRKMTGLPARVFGLA-DRGRIAPGYRADIVVFDPDTLADRA--------TFTRP--N 386 (415)
T ss_pred --CHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhCCC-CCceeCCCCCCCEEEEccccccccc--------chhhh--c
Confidence 1566776665444 5999999999999999999996 6799999999999999998543332 12222 1
Q ss_pred EeeeeEEEEEECCEEEEECCceee
Q psy10113 447 VCHGVPEYVIVGGRVCVDEGNLRV 470 (596)
Q Consensus 447 ~~~g~~~~Vi~~GrvV~~dG~~~~ 470 (596)
.....+..||++|++||+||+++.
T Consensus 387 ~~~~~v~~viv~G~~v~~~~~~~~ 410 (415)
T cd01297 387 QPAEGIEAVLVNGVPVVRDGAFTG 410 (415)
T ss_pred cCCCCceEEEECCEEEEECCEECC
Confidence 122358999999999999998764
No 32
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=100.00 E-value=6.1e-40 Score=348.21 Aligned_cols=362 Identities=20% Similarity=0.214 Sum_probs=255.0
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccC-CCc---cccCCC--Ccc
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTH-FEL---ELMGAT--SVD 91 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH-l~~---~~~~~~--~~d 91 (596)
+++++|+||+|++++....++|+|+||+|++|++... ...++||++|++|||||||+|+| +.. |..+.. ..+
T Consensus 1 ~~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~--~~~~~iDa~g~~v~PG~ID~H~h~~~~~~~p~~~~~~~~~~ 78 (383)
T PRK15446 1 MMEMILSNARLVLPDEVVDGSLLIEDGRIAAIDPGAS--ALPGAIDAEGDYLLPGLVDLHTDNLEKHLAPRPGVDWPADA 78 (383)
T ss_pred CccEEEECcEEEcCCCceeeeEEEECCEEEEecCCCC--CCCceEeCCCCEEEeCeEEcccCCcccccCCCCCCccchHH
Confidence 3689999999999887779999999999999998543 24578999999999999999995 443 432322 238
Q ss_pred hHHHHHHHHHhCCceEEeccccCC--C-----CccHHHHHHHHHH--HhccCceeeeeccccccCCChhHHHHHHHHHHH
Q psy10113 92 DFYHGTKAAVAGGTTTIIDFALPR--K-----GESLIKTYESWRQ--KADEKVCCDYALHVGITWWSDQVQQEMAELCEK 162 (596)
Q Consensus 92 ~~~~g~~~al~~GtTti~D~~~~~--~-----~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~ 162 (596)
+|++++++|+++||||++|+.... + ...+.+.+..+.. ....+++|||++|+.+..|+++..++++++++
T Consensus 79 ~~~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD~~~h~~~~~~~~~~~~~l~~~~~- 157 (383)
T PRK15446 79 ALAAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARARGLLRADHRLHLRCELTNPDALELFEALLA- 157 (383)
T ss_pred HHHHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhcCchhccceeEEEEEecCcchHHHHHHHhc-
Confidence 899999999999999999975322 2 1333333334444 34467899999999999999888999999975
Q ss_pred cCCCEEEEEeecC-CCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHH
Q psy10113 163 HGVNSFKTFMAYK-GLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVT 241 (596)
Q Consensus 163 ~Gv~~~k~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~ 241 (596)
.|+.+||.||+.. +..+.....-++.+. +.+.| .+|+|+.+++.+...+ |...+.+++.
T Consensus 158 ~g~~~~k~fm~~~p~~~~~~~~~~~~~~~-~~~~g---~~~~e~~~~~~~~~~~----------------~~~~~~e~i~ 217 (383)
T PRK15446 158 HPRVDLVSLMDHTPGQRQFRDLEKYREYY-AGKYG---LSDEEFDAFVEERIAL----------------SARYAPPNRR 217 (383)
T ss_pred CCCcCEEEEeCCCCccccccCHHHHHHHH-HhhcC---CCHHHHHHHHHHHHHh----------------HhhcCHHHHH
Confidence 5999999999854 322222222244444 45777 7899998765433222 5666678899
Q ss_pred HHHHHhcccCCCeEEEec-CcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccc-cccccc-cCC-CCC
Q psy10113 242 RACTIANQVDCPLYVVHI-MSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWH-DQAAHV-LSP-PLR 317 (596)
Q Consensus 242 ~~i~la~~~~~p~~i~hv-~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~-~~~~~~-~~P-plr 317 (596)
+++.+|+..|+++ ..|. .+. +.+.++++. |+ .+..-.. +.... .... ...... ..| ++|
T Consensus 218 ~~v~~A~~~g~~v-~sH~~~~~---~~i~~a~~~----Gv--~~~e~~~------~~e~~-~~~~~~g~~v~~~~p~~~r 280 (383)
T PRK15446 218 AIAALARARGIPL-ASHDDDTP---EHVAEAHAL----GV--AIAEFPT------TLEAA-RAARALGMSVLMGAPNVVR 280 (383)
T ss_pred HHHHHHHHCCCce-eecCCCCH---HHHHHHHHc----CC--ceeeCCC------cHHHH-HHHHHCCCEEEeCCccccc
Confidence 9999999999998 4576 343 457777777 88 5541000 00000 0000 111111 223 355
Q ss_pred CC-CCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHh
Q psy10113 318 PD-ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTN 396 (596)
Q Consensus 318 ~~-~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n 396 (596)
.. ......++++++.|+.++++|||.+.+.. ..++. .+...++++.++++++|+|
T Consensus 281 ~~~~~~~~~~~~~~~~Gv~~~lgSD~~p~~~~-----------------------~~~~~-~~~~~gls~~~al~~~T~n 336 (383)
T PRK15446 281 GGSHSGNVSALDLAAAGLLDILSSDYYPASLL-----------------------DAAFR-LADDGGLDLPQAVALVTAN 336 (383)
T ss_pred CCcccchHhHHHHHHCCCcEEEEcCCChhhHH-----------------------HHHHH-HHHhcCCCHHHHHHHHhHH
Confidence 32 24567889999999999999999764211 11121 2234679999999999999
Q ss_pred HHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECC
Q psy10113 397 AAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEG 466 (596)
Q Consensus 397 ~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG 466 (596)
||++||+. ++|+|++|++|||||||++.. + ..+..||++|++||+.+
T Consensus 337 pA~~lgl~-~~G~I~~G~~ADlvv~d~~~~--~--------------------~~v~~v~~~G~~v~~~~ 383 (383)
T PRK15446 337 PARAAGLD-DRGEIAPGKRADLVRVRRAGG--L--------------------PVVRAVWRGGRRVFLAG 383 (383)
T ss_pred HHHHcCCC-CCcCcCCCCcCCEEEEcCCCC--C--------------------cchheEEECCEEEEeCC
Confidence 99999994 559999999999999998711 0 13578999999999753
No 33
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=100.00 E-value=4.1e-37 Score=322.08 Aligned_cols=323 Identities=15% Similarity=0.087 Sum_probs=245.6
Q ss_pred EeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCc-eeeeeccccccC
Q psy10113 69 VIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKV-CCDYALHVGITW 147 (596)
Q Consensus 69 V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~ 147 (596)
-+||+||+|+|+..+ +++.+++++|+++| |+++||....+.....+.+..+........ ..++.+++.+..
T Consensus 2 ~~Pg~iD~h~h~~~~-------~~~~~~~~aa~~gG-Ttvv~mpnt~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 73 (335)
T cd01294 2 TIPRPDDMHLHLRDG-------AMLKLVLPYTARGF-SRAIVMPNLKPPVTTTADALAYRERILAADPGPNFTPLMTLYL 73 (335)
T ss_pred cCCCcceeEecCCCc-------hHHHHHHHHHHhCC-CEEEECCCCCCCCCCHHHHHHHHHHHHhcCCCCcEEEEEEEec
Confidence 379999999999753 88999999999999 999999766554444454555555544444 345555444421
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEEeecC----CCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCC
Q psy10113 148 WSDQVQQEMAELCEKHGVNSFKTFMAYK----GLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKG 223 (596)
Q Consensus 148 ~~~~~~~e~~~lv~~~Gv~~~k~~~~~~----~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~ 223 (596)
......++++++++..|+.+||+|+.+. +....+++.++++++.+.++|+++.+|+|+..+...
T Consensus 74 ~~~~~~~el~~~~~~~G~~g~Klf~~~~~~~~~~~~~d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~~------------ 141 (335)
T cd01294 74 TENTTPEELREAKKKGGIRGVKLYPAGATTNSQGGVTDLEKIYPVLEAMQKLGMPLLVHGEVPDFKID------------ 141 (335)
T ss_pred cCCCCHHHHHHHHHhCCceEEEEecCCCccCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCCCccccc------------
Confidence 1222357888887656999999997521 111125688999999999999999999998654210
Q ss_pred CCcccCCChHHHHHHHHHHHHHHhcc-cCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCC
Q psy10113 224 PEGHQLSRPEEVEAEAVTRACTIANQ-VDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPC 302 (596)
Q Consensus 224 ~~~~~~~~p~~~e~~a~~~~i~la~~-~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~ 302 (596)
+...+.+.+.+.+.+|++ .++++|++|+++.++.++|++++ . .|++|+|++||.++..++..
T Consensus 142 --------~~~~e~~~~~~~~~lA~~~p~~~v~i~Hvst~~~~~~i~~ak-------~--~vt~Et~ph~L~l~~~~~~~ 204 (335)
T cd01294 142 --------VLDREAKFIPVLEPLAQRFPKLKIVLEHITTADAVEYVKSCN-------E--NVAATITPHHLLLTRDDLLG 204 (335)
T ss_pred --------chhhHHHHHHHHHHHHHHcCCCeEEEecccHHHHHHHHHhCC-------C--CcEEEEchhHheeeHHHhcC
Confidence 011124555678889987 49999999999999999887653 2 68999999999999887643
Q ss_pred ccccccccccCCCCCCCCCcHHHHHHHHhcCCcc-EEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccC
Q psy10113 303 TWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQ-TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVP 381 (596)
Q Consensus 303 ~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~-~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~ 381 (596)
. ..+..++++||||. .+++++||+.+..|.+. +++|||+|++..+|.. .|. ..|+.+++..++++| ..+.
T Consensus 205 ~-~~g~~~k~~PPlR~-~~d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~~---~~g--~~Gi~~~~~~l~~~~-~~~~- 275 (335)
T cd01294 205 G-GLNPHLYCKPVAKR-PEDREALRKAATSGHPKFFLGSDSAPHPKSNKES---SCG--CAGIFSAPIALPYLA-EVFE- 275 (335)
T ss_pred C-CCCCCeEEcCCCCC-HHHHHHHHHHHHcCCCCeEEECCCCCCCCccccC---CCC--CccccCHHHHHHHHH-HHHh-
Confidence 1 12567889999998 68999999999999999 5999999999887741 222 225555555888888 3444
Q ss_pred CCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeE
Q psy10113 382 GILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLV 447 (596)
Q Consensus 382 ~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~ 447 (596)
++++++++++++|.||||+||++++||+|.+|+ ..++++.+.+++...|+||+|-+
T Consensus 276 ~~l~l~~~v~~~s~nPA~i~gl~~~kg~i~~~~----------~~~~v~~~~~~s~~~~sp~~g~~ 331 (335)
T cd01294 276 EHNALDKLEAFASDNGPNFYGLPPNKKTITLVK----------EPWKVPEKIPFGNNGVVPFRAGE 331 (335)
T ss_pred ccCCHHHHHHHHHhHHHHHhCCCCCCCeEEEEe----------eceEcCchhccCCCceecccCCc
Confidence 599999999999999999999999888776664 78899999999999999999863
No 34
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=100.00 E-value=9.3e-36 Score=320.78 Aligned_cols=370 Identities=22% Similarity=0.332 Sum_probs=237.4
Q ss_pred EEEEccEEEcCC---CceeeeEEEECCeEEEeccCCCCC--CCCeEEEcCCCEEeeCccccccCCCcccc-C--------
Q psy10113 21 LLIKNGKVVNAD---KISDLDIYIENGVIQQLGRNLIVP--GGVRVIDAAGSYVIPGGIDPHTHFELELM-G-------- 86 (596)
Q Consensus 21 llIkng~Iv~~d---~~~~~dV~IedG~I~~Ig~~~~~~--~~~~vIDa~G~~V~PG~ID~HtHl~~~~~-~-------- 86 (596)
++|+|++|++++ ...+++|+|+||||++|+++...+ .+.++||+.|++|||||||+|+|+..++. +
T Consensus 1 ~~i~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~~~~~~~ 80 (411)
T cd01298 1 ILIRNGTIVTTDPRRVLEDGDVLVEDGRIVAVGPALPLPAYPADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADDLPLM 80 (411)
T ss_pred CeEEeeEEEEeCCcceeecceEEEECCEEEEecCccccccCCcCeEEeCCCCEEccCccccccchhhHHhhcccCCCCHH
Confidence 589999999873 445799999999999999865542 46889999999999999999999965422 1
Q ss_pred ------------CCCcchHHHHH----HHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccC---
Q psy10113 87 ------------ATSVDDFYHGT----KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITW--- 147 (596)
Q Consensus 87 ------------~~~~d~~~~g~----~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~--- 147 (596)
..+.++++..+ ..+++.||||++|+..... ....++.+ . ...+..+.+.+ .....
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~---~-~g~r~~~~~~~-~~~~~~~~ 154 (411)
T cd01298 81 EWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMYFFYP-DAVAEAAE---E-LGIRAVLGRGI-MDLGTEDV 154 (411)
T ss_pred HHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECccccch-HHHHHHHH---H-hCCeEEEEcce-ecCCCccc
Confidence 12345555443 4456899999999865432 12222221 1 12222222222 11111
Q ss_pred -CChhHHHHHHHHHHH---cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEec-CchhhhHHHHHHHHHcCCC
Q psy10113 148 -WSDQVQQEMAELCEK---HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHA-ENGEIIDKNTQKLLAAGIK 222 (596)
Q Consensus 148 -~~~~~~~e~~~lv~~---~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHa-e~~~~i~~~~~~l~~~Gi~ 222 (596)
......+++.+++++ .|...+|++++++....++++++.++++.|+++|+++.+|+ ++.+......+ ..|..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~---~~~~~ 231 (411)
T cd01298 155 EETEEALAEAERLIREWHGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETEDEVEESLE---KYGKR 231 (411)
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCccCCHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHH---HhCCC
Confidence 123344555555543 24778899998877777899999999999999999999996 44332211111 11111
Q ss_pred CCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCC
Q psy10113 223 GPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPC 302 (596)
Q Consensus 223 ~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~ 302 (596)
+ +... .-....++++.+.|+..-.. +.++++++. |+ .+ .+|+....
T Consensus 232 ---------~-------~~~~-~~~~~~~~~~~i~H~~~l~~-~~~~~l~~~----gi--~~--~~~p~~~~-------- 277 (411)
T cd01298 232 ---------P-------VEYL-EELGLLGPDVVLAHCVWLTD-EEIELLAET----GT--GV--AHNPASNM-------- 277 (411)
T ss_pred ---------H-------HHHH-HHcCCCCCCeEEEEecCCCH-HHHHHHHHc----CC--eE--EEChHHhh--------
Confidence 0 0011 11233467777888775432 456667666 76 32 34433210
Q ss_pred ccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccC-
Q psy10113 303 TWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVP- 381 (596)
Q Consensus 303 ~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~- 381 (596)
... ...+| ++.++++|+.+++|||++........+ -+.++...+......
T Consensus 278 --~~~---~~~~~----------~~~~~~~Gv~~~~GsD~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 328 (411)
T cd01298 278 --KLA---SGIAP----------VPEMLEAGVNVGLGTDGAASNNNLDMF--------------EEMRLAALLQKLAHGD 328 (411)
T ss_pred --hhh---hCCCC----------HHHHHHCCCcEEEeCCCCccCCCcCHH--------------HHHHHHHHHhccccCC
Confidence 000 01233 347899999999999987543211110 134444444333322
Q ss_pred -CCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCE
Q psy10113 382 -GILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGR 460 (596)
Q Consensus 382 -~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~Gr 460 (596)
..++++++++++|.|||++||++ ++|+|++|++|||||||.+..+.++.+.+.+...+.. ..+.|..||++|+
T Consensus 329 ~~~~~~~~al~~~T~~~A~~lg~~-~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~-----~~~~v~~v~~~G~ 402 (411)
T cd01298 329 PTALPAEEALEMATIGGAKALGLD-EIGSLEVGKKADLILIDLDGPHLLPVHDPISHLVYSA-----NGGDVDTVIVNGR 402 (411)
T ss_pred CCcCCHHHHHHHHHhhHHHHhCCc-cCCCcCCCccCCEEEEeCCCCccCCccchhhHheEec-----CCCCeeEEEECCE
Confidence 26899999999999999999997 8999999999999999998776666544433322222 2458999999999
Q ss_pred EEEECCce
Q psy10113 461 VCVDEGNL 468 (596)
Q Consensus 461 vV~~dG~~ 468 (596)
+||++|++
T Consensus 403 ~v~~~~~~ 410 (411)
T cd01298 403 VVMEDGEL 410 (411)
T ss_pred EEEECCEe
Confidence 99999976
No 35
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=100.00 E-value=6.5e-36 Score=316.39 Aligned_cols=357 Identities=19% Similarity=0.188 Sum_probs=248.9
Q ss_pred EEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCc------cccCCCCcchHHH
Q psy10113 22 LIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFEL------ELMGATSVDDFYH 95 (596)
Q Consensus 22 lIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~------~~~~~~~~d~~~~ 95 (596)
+|+|++|++++....++|.|+||+|++|++... ...++||++|++|||||||+|+|... |.......++|++
T Consensus 1 ~i~~~~vv~~~~~~~~~i~i~dg~I~~i~~~~~--~~~~~iD~~G~~v~PGlID~H~h~~e~~~~prp~~~~~~~~~~~~ 78 (376)
T TIGR02318 1 VLSNARLVLEDEVVEGSVVIEDGAIADIGEGPV--ALAEAIDGEGDLLLPGLIDLHTDNLERHMSPRPGVDWPIDAAIVE 78 (376)
T ss_pred CEeCeEEECCCceEeeeEEEECCEEEEecCCCC--CCCceEeCCCCEEeccEEEcccCccccCcCCCCCCCcchHHHHHH
Confidence 589999999888777899999999999997432 24568999999999999999999865 3221112377999
Q ss_pred HHHHHHhCCceEEeccccCC---CCccHHHHHHHHH---HHhccC--ceeeeeccccccCCChhHHHHHHHHHHHcCCCE
Q psy10113 96 GTKAAVAGGTTTIIDFALPR---KGESLIKTYESWR---QKADEK--VCCDYALHVGITWWSDQVQQEMAELCEKHGVNS 167 (596)
Q Consensus 96 g~~~al~~GtTti~D~~~~~---~~~~~~~a~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~ 167 (596)
+.++++++||||++|+.... ++....+.++... ..+..+ ..+|+++|..+....++..++++.++ +.|+.+
T Consensus 79 ~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~h~~~e~~~~~~~~~l~~~~-~~g~~~ 157 (376)
T TIGR02318 79 HDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDRGLLRADHRLHLRCELPNEEVLPELEELI-DDPRVD 157 (376)
T ss_pred HHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhcCchhhhceeEEEEEecCccHHHHHHHHh-cCCCcC
Confidence 99999999999999997432 2323344444433 555545 88999999999777777788999996 569999
Q ss_pred EEEEeecCCC-c-cCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHH
Q psy10113 168 FKTFMAYKGL-Y-MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACT 245 (596)
Q Consensus 168 ~k~~~~~~~~-~-~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~ 245 (596)
||.||+..+. + ..+++.+++.+.. +.| .+|+|+..++.+...+ .+-. ..+++.+++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g---~~~~e~~~~~~~~~~~---~~~~-------------~~e~i~~~v~ 216 (376)
T TIGR02318 158 LISLMDHTPGQRQFRDLEKYREYYRG--KRG---LSDDEFDEIVEERIAR---RAEY-------------GLANRSEIAA 216 (376)
T ss_pred EEEEeCCCCCcccccCHHHHHHHHHh--hcC---CCHHHHHHHHHHHHHH---Hhhc-------------cHHHHHHHHH
Confidence 9999975332 2 3566677776654 666 7899987765533322 2200 1477889999
Q ss_pred HhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccc-cccCC-CCCCCC-Cc
Q psy10113 246 IANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAA-HVLSP-PLRPDE-TT 322 (596)
Q Consensus 246 la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~-~~~~P-plr~~~-~~ 322 (596)
+|+..++|+ ..|... ..+.+.++++. |+ .+. |.. .+..........+.. ..+.| ++|... ..
T Consensus 217 ~A~~~G~~v-~sH~~~--~~e~i~~a~~~----Gv--~~~-E~~-----~t~e~a~~~~~~G~~v~~~~p~~~r~~~~~~ 281 (376)
T TIGR02318 217 LARARGIPL-ASHDDD--TPEHVAEAHDL----GV--TIS-EFP-----TTLEAAKEARSLGMQILMGAPNIVRGGSHSG 281 (376)
T ss_pred HHHHCCCeE-EEecCC--CHHHHHHHHHC----CC--Chh-ccC-----CCHHHHHHHHHcCCeEEECCccccccccccc
Confidence 999999998 557631 23456777776 77 221 110 000000000111112 22334 566521 12
Q ss_pred HHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcC
Q psy10113 323 PTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFN 402 (596)
Q Consensus 323 ~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lg 402 (596)
...+++++..|..++++|||.+... +..++.......++++.++++++|.|||++||
T Consensus 282 ~~~l~~~~~~G~~~~l~SD~~p~~~-----------------------l~~~~~~~~~~~gl~~~~al~~~T~npA~~lg 338 (376)
T TIGR02318 282 NLSARELAHEGLLDVLASDYVPASL-----------------------LLAAFQLADDVEGIPLPQAVKMVTKNPARAVG 338 (376)
T ss_pred hHHHHHHHHCCCcEEEEcCCCcHHH-----------------------HHHHHHHHHhhcCCCHHHHHHHHhHHHHHHcC
Confidence 6789999999999999999976321 12223333333468999999999999999999
Q ss_pred CCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEE
Q psy10113 403 LYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCV 463 (596)
Q Consensus 403 l~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~ 463 (596)
++ ++|+|++|++||||+||+... . ..+..||++|++||
T Consensus 339 l~-~~G~I~~G~~ADlvvvd~~~~--~--------------------~~v~~v~~~G~~v~ 376 (376)
T TIGR02318 339 LS-DRGSIAPGKRADLVRVHRVDG--V--------------------PRIRAVWRAGRRVY 376 (376)
T ss_pred CC-CCCcCCCCCcccEEEEcCCCC--C--------------------ccceEEEECCEEeC
Confidence 94 789999999999999998410 0 14679999999986
No 36
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=2.2e-35 Score=321.21 Aligned_cols=378 Identities=20% Similarity=0.265 Sum_probs=233.5
Q ss_pred ccEEEEccEEEcCC---CceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCC--------
Q psy10113 19 NRLLIKNGKVVNAD---KISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGA-------- 87 (596)
Q Consensus 19 ~~llIkng~Iv~~d---~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~-------- 87 (596)
|+++|+|++|++++ ...+++|+|+||+|++|++....+.+.++||++|++|||||||+|+|+..+++..
T Consensus 1 ~~~~i~~~~vi~~~~~~~~~~g~V~I~dg~I~~vg~~~~~~~~~~vID~~G~~vlPGlId~H~H~~~~~~~g~~~~~~~~ 80 (445)
T PRK07228 1 MTILIKNAGIVTMNAKREIVDGDVLIEDDRIAAVGDRLDLEDYDDHIDATGKVVIPGLIQGHIHLCQTLFRGIADDLELL 80 (445)
T ss_pred CeEEEEccEEEecCCCcEecccEEEEECCEEEEecCCcccCcCCeEEeCCCCEEecCEEecccCCccccceeccCCCCHH
Confidence 56999999999875 3457999999999999998654433678999999999999999999996543211
Q ss_pred -------------CCcchHHH----HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhcc----Cceeeeecc--cc
Q psy10113 88 -------------TSVDDFYH----GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADE----KVCCDYALH--VG 144 (596)
Q Consensus 88 -------------~~~d~~~~----g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~--~~ 144 (596)
.+.++.+. +...+|++||||++|+...... ...++...+.... ...++++.+ ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~~~~~~---~~~~~a~~~~g~r~~~~~~~~~~~~~~p~~ 157 (445)
T PRK07228 81 DWLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDMESVHHT---DSAFEAAGESGIRAVLGKVMMDYGDDVPEG 157 (445)
T ss_pred HHHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEccccccCh---HHHHHHHHHcCCeEEEecceecCCcCCCcc
Confidence 11222222 3345679999999998643221 1222222222111 111222211 01
Q ss_pred ccCCChhHHHHHHHHHHHc-CCCE--EEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCC
Q psy10113 145 ITWWSDQVQQEMAELCEKH-GVNS--FKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGI 221 (596)
Q Consensus 145 ~~~~~~~~~~e~~~lv~~~-Gv~~--~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi 221 (596)
......+..++...+++.. |... +...++++....+++++|.++++.|+++|+++++|+.+.....+...+ ..|.
T Consensus 158 ~~~~~~~~l~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~--~~g~ 235 (445)
T PRK07228 158 LQEDTEASLAESVRLLEKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVEE--ETGM 235 (445)
T ss_pred ccccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH--HhCC
Confidence 1111223344555555542 4432 333345555567889999999999999999999998543321111111 1232
Q ss_pred CCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCC
Q psy10113 222 KGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIP 301 (596)
Q Consensus 222 ~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~ 301 (596)
+ + + + -+.-....+.++++.|+..-.. +.++..++. |+ .+. .|+.. .+.
T Consensus 236 ~---------~--~--~----~l~~~g~~~~~~~l~H~~~~~~-~~~~~~~~~----g~--~v~--~~P~~------~~~ 283 (445)
T PRK07228 236 R---------N--I--H----YLDEVGLTGEDLILAHCVWLDE-EEREILAET----GT--HVT--HCPSS------NLK 283 (445)
T ss_pred C---------H--H--H----HHHHCCCCCCCcEEEEEecCCH-HHHHHHHHc----CC--eEE--EChHH------hhh
Confidence 2 0 0 1 1111233467888889883221 223444555 77 433 22221 000
Q ss_pred CccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccC
Q psy10113 302 CTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVP 381 (596)
Q Consensus 302 ~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~ 381 (596)
. ......++++++.|+.+++|||+.+.+..... |. +.++...+++....
T Consensus 284 ~-----------------~~~~~p~~~~~~~Gv~v~lGtD~~~~~~~~~~-----~~---------~~~~~~~~~~~~~~ 332 (445)
T PRK07228 284 L-----------------ASGIAPVPDLLERGINVALGADGAPCNNTLDP-----FT---------EMRQAALIQKVDRL 332 (445)
T ss_pred c-----------------ccccCcHHHHHHCCCeEEEcCCCCccCCCccH-----HH---------HHHHHHHHhhhccC
Confidence 0 01123456899999999999998765432211 11 44555555544322
Q ss_pred --CCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeE---eeeeEEEEE
Q psy10113 382 --GILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLV---CHGVPEYVI 456 (596)
Q Consensus 382 --~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~---~~g~~~~Vi 456 (596)
..+++.++++++|.|||++||+++++|+|++|+.|||||+|.+.....+... .+|+..+. ....|..||
T Consensus 333 ~~~~~s~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~p~~~------~~~~~~~~~~~~~~~v~~v~ 406 (445)
T PRK07228 333 GPTAMPARTVFEMATLGGAKAAGFEDEIGSLEEGKKADLAILDLDGLHATPSHG------VDVLSHLVYAAHGSDVETTM 406 (445)
T ss_pred CCcccCHHHHHHHHHHHHHHHhCCCCCccccCCCCccCEEEEcCCCcccCCCcc------cCHHHHhheeCCCCCeeEEE
Confidence 4689999999999999999999888999999999999999998654444320 12222221 134789999
Q ss_pred ECCEEEEECCceee
Q psy10113 457 VGGRVCVDEGNLRV 470 (596)
Q Consensus 457 ~~GrvV~~dG~~~~ 470 (596)
++|++||++|++..
T Consensus 407 v~G~~v~~~g~~~~ 420 (445)
T PRK07228 407 VDGKIVMEDGELTT 420 (445)
T ss_pred ECCEEEEECCeEcc
Confidence 99999999998764
No 37
>PRK06687 chlorohydrolase; Validated
Probab=100.00 E-value=1.6e-34 Score=311.80 Aligned_cols=373 Identities=17% Similarity=0.205 Sum_probs=237.8
Q ss_pred EEEEccEEEcCCCc----eeeeEEEECCeEEEeccCCCC--CCCCeEEEcCCCEEeeCccccccCCCccccC--------
Q psy10113 21 LLIKNGKVVNADKI----SDLDIYIENGVIQQLGRNLIV--PGGVRVIDAAGSYVIPGGIDPHTHFELELMG-------- 86 (596)
Q Consensus 21 llIkng~Iv~~d~~----~~~dV~IedG~I~~Ig~~~~~--~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~-------- 86 (596)
++|+|++|++.+.. .+++|+|+||+|++||+.... +...++||+.|++|||||||+|+|+.+..+.
T Consensus 2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~~~~~~~viD~~g~~v~PGlIn~H~H~~~~~~rg~~~~~~~ 81 (419)
T PRK06687 2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAFLEQAEQIIDYQGAWIMPGLVNCHTHSAMTGLRGIRDDSNL 81 (419)
T ss_pred cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCcccccccccCeEEeCCCCEEccceeeeccCCCccccccccCCCCH
Confidence 68999999987653 358999999999999985432 2356899999999999999999999665431
Q ss_pred -------------CCCcchHHHHHH----HHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc--cccC
Q psy10113 87 -------------ATSVDDFYHGTK----AAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV--GITW 147 (596)
Q Consensus 87 -------------~~~~d~~~~g~~----~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~~~ 147 (596)
..++++.+.+++ .++++||||+.|+... .+......++..++. +.++.++... ....
T Consensus 82 ~~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~-~~~~~~~~~~a~~~~---Gir~~~~~~~~~~~~~ 157 (419)
T PRK06687 82 HEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNP-NGVDIQQIYQVVKTS---KMRCYFSPTLFSSETE 157 (419)
T ss_pred HHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhhcc-ccccHHHHHHHHHHh---CCceEeccccccCCcc
Confidence 123344444444 4489999999998643 223344444444333 3344443321 1122
Q ss_pred CChhHHHHHHHHHHH---cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCC
Q psy10113 148 WSDQVQQEMAELCEK---HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGP 224 (596)
Q Consensus 148 ~~~~~~~e~~~lv~~---~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~ 224 (596)
..++..++..+++++ .+...++..++++..+.++++.+.++++.|+++|+++++|+.+....... .+...|..
T Consensus 158 ~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e~~~e~~~--~~~~~g~~-- 233 (419)
T PRK06687 158 TTAETISRTRSIIDEILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGI--ILKRYGKR-- 233 (419)
T ss_pred cHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHH--HHHHHCcC--
Confidence 223344555555543 24456889999999999999999999999999999999998654311111 11111211
Q ss_pred CcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeE-EeeccceeecCCCCCCCc
Q psy10113 225 EGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLY-GETLAAAVGTHANQIPCT 303 (596)
Q Consensus 225 ~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~-~e~~~~~l~~~~~~~~~~ 303 (596)
| .+ .+.-....+-+..+.|+..... +.++..++. |+ .+. +......+
T Consensus 234 -------~----~~----~l~~~g~l~~~~~~~H~~~~~~-~~~~~la~~----g~--~v~~~P~sn~~l---------- 281 (419)
T PRK06687 234 -------P----LA----FLEELGYLDHPSVFAHGVELNE-REIERLASS----QV--AIAHNPISNLKL---------- 281 (419)
T ss_pred -------H----HH----HHHHcCCCCCCeEEEEEecCCH-HHHHHHHHc----CC--eEEECcHHhhhh----------
Confidence 1 01 1111222344555666654322 334555555 76 332 22111111
Q ss_pred cccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhcc--C
Q psy10113 304 WHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVV--P 381 (596)
Q Consensus 304 ~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~--~ 381 (596)
....+|+ .++++.|+.+++|||....+....++ . ++++...+++... .
T Consensus 282 ------~~g~~p~----------~~~~~~Gv~v~lGtD~~~~~~~~~~~-----~---------~~~~~~~~~~~~~~~~ 331 (419)
T PRK06687 282 ------ASGIAPI----------IQLQKAGVAVGIATDSVASNNNLDMF-----E---------EGRTAALLQKMKSGDA 331 (419)
T ss_pred ------ccCCCcH----------HHHHHCCCeEEEeCCCCCCCCChhHH-----H---------HHHHHHHHhccccCCC
Confidence 0112333 37899999999999985433322221 0 4455545544321 2
Q ss_pred CCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCc-ceeecCCCccCCCCCCcccCeEeee---eEEEEEE
Q psy10113 382 GILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKA-KRTISAKTHAHACDYNIFEGLVCHG---VPEYVIV 457 (596)
Q Consensus 382 ~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~-~~~i~~~~~~~~~~~~~~~g~~~~g---~~~~Vi~ 457 (596)
..+++.++++++|.|||+++|+++++|+|++|+.||||++|.+. +... ...+|+..+.+.+ .|..||+
T Consensus 332 ~~~~~~~~l~~aT~~gA~~lg~~~~~G~l~~G~~ADlv~~d~~~~~~~~--------p~~~~~~~lv~~~~~~~v~~v~v 403 (419)
T PRK06687 332 SQFPIETALKVLTIEGAKALGMENQIGSLEVGKQADFLVIQPQGKIHLQ--------PQENMLSHLVYAVKSSDVDDVYI 403 (419)
T ss_pred ccCCHHHHHHHHhHHHHHHcCCCCCCcccCCCccCCEEEECCCCCCCcC--------CccCHHHHhheeCCCCCccEEEE
Confidence 35899999999999999999998789999999999999999863 2111 1245665555544 6899999
Q ss_pred CCEEEEECCceeec
Q psy10113 458 GGRVCVDEGNLRVA 471 (596)
Q Consensus 458 ~GrvV~~dG~~~~~ 471 (596)
+||+|++||+++..
T Consensus 404 ~G~~v~~~g~~~~~ 417 (419)
T PRK06687 404 AGEQVVKQGQVLTV 417 (419)
T ss_pred CCEEEEECCeEecC
Confidence 99999999998653
No 38
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=100.00 E-value=1.7e-33 Score=304.64 Aligned_cols=378 Identities=17% Similarity=0.200 Sum_probs=234.8
Q ss_pred ccEEEEccEEEcCCC----ceeeeEEEECCeEEEeccCCC--CCCCCeEEEcCCCEEeeCccccccCCCcccc-------
Q psy10113 19 NRLLIKNGKVVNADK----ISDLDIYIENGVIQQLGRNLI--VPGGVRVIDAAGSYVIPGGIDPHTHFELELM------- 85 (596)
Q Consensus 19 ~~llIkng~Iv~~d~----~~~~dV~IedG~I~~Ig~~~~--~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~------- 85 (596)
|+++|+|++|++.+. ..+++|+|+||+|++||+... .+.+.++||++|++|||||||+|+|+.+.++
T Consensus 1 ~~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~~~~~~~viD~~g~~i~PGlVn~H~H~~~~~~rg~~~~~ 80 (435)
T PRK15493 1 MKTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFASDFEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRGIGDDM 80 (435)
T ss_pred CeEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCccccccCCCCeEEeCCCCEEccceeecccCccchhhhccCCCC
Confidence 568999999997653 246899999999999997432 2235789999999999999999999854321
Q ss_pred --------------CCCCcchHHH----HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc-ccc
Q psy10113 86 --------------GATSVDDFYH----GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV-GIT 146 (596)
Q Consensus 86 --------------~~~~~d~~~~----g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~ 146 (596)
...+.++.+. +...+|++||||+.|+...... ......+...+. ..+...-..+.. ...
T Consensus 81 ~l~~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~-~~~~~~~a~~~~-GiR~~~~~~~~~~~~~ 158 (435)
T PRK15493 81 LLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIGV-DQDAIMETVSRS-GMRAAVSRTLFSFGTK 158 (435)
T ss_pred CHHHHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEcccccccc-CHHHHHHHHHHc-CCcEEEeeeecCCCCC
Confidence 1122344333 3456688999999998643211 111222222222 222222111111 111
Q ss_pred CCChhHHHHHHHHHHHc-C-CCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCC
Q psy10113 147 WWSDQVQQEMAELCEKH-G-VNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGP 224 (596)
Q Consensus 147 ~~~~~~~~e~~~lv~~~-G-v~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~ 224 (596)
.......++...+++.. + ...++..++++..+.++++.+.++++.|+++|+++++|+.+........+ ...|.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~t~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~--~~~g~~-- 234 (435)
T PRK15493 159 EDEKKAIEEAEKYVKRYYNESGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDIE--AQYGKR-- 234 (435)
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCeEEEEeCCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHH--HHhCCC--
Confidence 11223344445554432 2 34578888999999999999999999999999999999855432111111 111211
Q ss_pred CcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceee-EEeeccceeecCCCCCCCc
Q psy10113 225 EGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTL-YGETLAAAVGTHANQIPCT 303 (596)
Q Consensus 225 ~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v-~~e~~~~~l~~~~~~~~~~ 303 (596)
| .+.+. -....+-+..+.|+..-.. +.++..++. |. .+ +++.....+
T Consensus 235 -------~----~~~l~----~~Gll~~~~~~~H~~~l~~-~d~~~la~~----g~--~v~~~P~sn~~l---------- 282 (435)
T PRK15493 235 -------P----VEYAA----SCGLFKRPTVIAHGVVLND-NERAFLAEH----DV--RVAHNPNSNLKL---------- 282 (435)
T ss_pred -------H----HHHHH----HcCCCCCCcEEEEeecCCH-HHHHHHHHc----CC--eEEEChHHHHHH----------
Confidence 1 11111 1233455666677664332 223444444 66 33 222221110
Q ss_pred cccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhcc--C
Q psy10113 304 WHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVV--P 381 (596)
Q Consensus 304 ~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~--~ 381 (596)
. ...+| +.++++.|+.+++|||....+....++ -+++++.++++++. .
T Consensus 283 ---~---~g~~p----------~~~~~~~Gv~v~lGtD~~~~~~~~d~~--------------~~~~~a~~~~~~~~~~~ 332 (435)
T PRK15493 283 ---G---SGIAN----------VKAMLEAGIKVGIATDSVASNNNLDMF--------------EEMRIATLLQKGIHQDA 332 (435)
T ss_pred ---h---cCccc----------HHHHHHCCCeEEEccCccccCCCcCHH--------------HHHHHHHHHHhhccCCC
Confidence 0 01223 337899999999999985543222221 16666667766543 3
Q ss_pred CCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeee---eEEEEEEC
Q psy10113 382 GILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG---VPEYVIVG 458 (596)
Q Consensus 382 ~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g---~~~~Vi~~ 458 (596)
..++++++++++|.|+|++||+. ++|+|++|+.||||+||.+....+. ...+|+..+.+.+ .|..||++
T Consensus 333 ~~~~~~~~l~~aT~~gA~~lg~~-~~G~l~~G~~ADlvv~d~~~~~~~~-------p~~d~~~~lv~~~~~~~V~~v~V~ 404 (435)
T PRK15493 333 TALPVETALTLATKGAAEVIGMK-QTGSLEVGKCADFITIDPSNKPHLQ-------PADEVLSHLVYAASGKDISDVIIN 404 (435)
T ss_pred CcCCHHHHHHHHhHHHHHHcCCC-CCCccCCCCcCCEEEEcCCCCCCcC-------CccChHHhEEEeCCCCCccEEEEC
Confidence 57899999999999999999994 6899999999999999975322221 1245666666553 58999999
Q ss_pred CEEEEECCceeecC
Q psy10113 459 GRVCVDEGNLRVAQ 472 (596)
Q Consensus 459 GrvV~~dG~~~~~~ 472 (596)
||+|++||+++...
T Consensus 405 G~~v~~~g~~~~~d 418 (435)
T PRK15493 405 GKRVVWNGECKTLD 418 (435)
T ss_pred CEEEEECCeECCCC
Confidence 99999999996543
No 39
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=100.00 E-value=4.3e-33 Score=296.58 Aligned_cols=350 Identities=17% Similarity=0.165 Sum_probs=228.7
Q ss_pred cccEEEEccEEEcCCC--ceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHH
Q psy10113 18 QNRLLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYH 95 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~--~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~ 95 (596)
+++++|+|++|+++.. ....+|+|+||+|++|++... +...++||++|++|||||||+|+|+..+.. ++..+
T Consensus 2 ~~~~li~~~~i~~~~~~~~~~~~i~i~~g~I~~i~~~~~-~~~~~viD~~g~~v~PGliD~H~H~~~~g~-----~~~~~ 75 (379)
T PRK12394 2 KNDILITNGHIIDPARNINEINNLRIINDIIVDADKYPV-ASETRIIHADGCIVTPGLIDYHAHVFYDGT-----EGGVR 75 (379)
T ss_pred CccEEEECcEEECCCCCcccccEEEEECCEEEEEcCCCC-CCCCeEEECCCCEEECCEEEeeecCCCCCc-----ccccC
Confidence 3579999999998643 346899999999999987432 235689999999999999999999965432 12233
Q ss_pred HHHHHHhCCceEEeccccCCCCccHHHHHHHHH---HHhccCceeeeeccccccC--C---Chh--HHHHHHHHHHH--c
Q psy10113 96 GTKAAVAGGTTTIIDFALPRKGESLIKTYESWR---QKADEKVCCDYALHVGITW--W---SDQ--VQQEMAELCEK--H 163 (596)
Q Consensus 96 g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~---~~~~~~~~~~~~~~~~~~~--~---~~~--~~~e~~~lv~~--~ 163 (596)
....++++||||++|+.... ....+.+.+.. +....++..+++++..... . ... ..+++.++++. .
T Consensus 76 ~~~~~l~~G~Ttv~d~g~~~--~~~~~~~~~~~~a~~~~gira~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (379)
T PRK12394 76 PDMYMPPNGVTTVVDAGSAG--TANFDAFYRTVICASKVRIKAFLTVSPPGQTWSGYQENYDPDNIDENKIHALFRQYRN 153 (379)
T ss_pred HHHHHHhCCccEEEECCCCC--cccHHHHHHHHhhhhcceeeeEEeeecccccccCcccccChhHCCHHHHHHHHHHCcC
Confidence 45568999999999986432 22222233221 1111344555555533221 1 111 13567777654 4
Q ss_pred CCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHH
Q psy10113 164 GVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRA 243 (596)
Q Consensus 164 Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~ 243 (596)
++.++|+++.......++++.+.+.++.|+++|+++++|+++........
T Consensus 154 ~~~g~ki~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~------------------------------ 203 (379)
T PRK12394 154 VLQGLKLRVQTEDIAEYGLKPLTETLRIANDLRCPVAVHSTHPVLPMKEL------------------------------ 203 (379)
T ss_pred cEEEEEEEEecccccccchHHHHHHHHHHHHcCCCEEEEeCCCCccHHHH------------------------------
Confidence 67788877644322246789999999999999999999997643211111
Q ss_pred HHHhcccCCCeEE-------EecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCC
Q psy10113 244 CTIANQVDCPLYV-------VHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPL 316 (596)
Q Consensus 244 i~la~~~~~p~~i-------~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Ppl 316 (596)
+.+...-....|. .|.......+.+..++++ |+ .+.... +
T Consensus 204 ~~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~----G~--~~~~~~-------------------------g-- 250 (379)
T PRK12394 204 VSLLRRGDIIAHAFHGKGSTILTEEGAVLAEVRQARER----GV--IFDAAN-------------------------G-- 250 (379)
T ss_pred HHhcCCCCEEEecCCCCCCCcCCCCCCChHHHHHHHhC----Ce--EEEecC-------------------------C--
Confidence 1111111111111 122233334556666666 65 211000 0
Q ss_pred CCCCCcHHHHHHHHhcCC-ccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhH
Q psy10113 317 RPDETTPTHLLTLLNENA-LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTST 395 (596)
Q Consensus 317 r~~~~~~~~l~~~l~~G~-~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~ 395 (596)
+. ..+.+.+++++.+|. .+++|||+++.+..... ...|..++++++ ..+++++++++++|.
T Consensus 251 ~s-~~~~~~~~~~l~~G~~~~~lgTD~~~~~~~~~~----------------~~~l~~~~~~~~-~~~~~~~~~~~~at~ 312 (379)
T PRK12394 251 RS-HFDMNVARRAIANGFLPDIISSDLSTITKLAWP----------------VYSLPWVLSKYL-ALGMALEDVINACTH 312 (379)
T ss_pred cc-ccchHHHHHHHHCCCCceEEECCCCCCCcccCc----------------cchHHHHHHHHH-HcCCCHHHHHHHHHH
Confidence 00 123456778999995 89999999887632110 133455666665 456999999999999
Q ss_pred hHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeee----eEEEEEECCEEEEECC
Q psy10113 396 NAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG----VPEYVIVGGRVCVDEG 466 (596)
Q Consensus 396 n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g----~~~~Vi~~GrvV~~dG 466 (596)
|||++||+++++|+|++|++|||++||.+.++... .+ +.|..+.| .|..||++|++||++-
T Consensus 313 ~~a~~~g~~~~~G~i~~G~~ADl~~~~~~~~~~~~---------~d-~~g~~~~~~~~~~v~~t~v~G~~v~~~~ 377 (379)
T PRK12394 313 TPAVLMGMAAEIGTLAPGAFADIAIFKLKNRHVEF---------AD-IHGETLTGTHVLVPQMTIKSGEILYRQI 377 (379)
T ss_pred HHHHHhCCCCCCCccCCCCccCEEEEecCcCccee---------cc-CCCCEEEeeeecceEEEEECCEEEEecC
Confidence 99999999767899999999999999998765422 12 57778888 7999999999999854
No 40
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=100.00 E-value=5e-33 Score=297.49 Aligned_cols=364 Identities=21% Similarity=0.248 Sum_probs=233.0
Q ss_pred ccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCC---CCCeEEEcCCCEEeeCccccccCCCccccC-CCCcchHH
Q psy10113 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVP---GGVRVIDAAGSYVIPGGIDPHTHFELELMG-ATSVDDFY 94 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~---~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~-~~~~d~~~ 94 (596)
|.++|+|++|++.+....++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+...... .....++.
T Consensus 1 ~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~v~~~~~~~~~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~~~~~~t~~ 80 (388)
T PRK10657 1 MFTLLKNAHVYAPEDLGKKDILIAGGKIIAIADNINIPDIVPDIEVIDASGKILVPGFIDQHVHIIGGGGEGGFSTRTPE 80 (388)
T ss_pred CeEEEEccEEECCCCCcceEEEEECCEEEEecCCccccccCCCCeEEECCCCEEcccceeeeeCcccCCCCcccccCCHH
Confidence 46899999999987666799999999999998754322 356899999999999999999998632111 11223555
Q ss_pred HHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeec
Q psy10113 95 HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAY 174 (596)
Q Consensus 95 ~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~ 174 (596)
.++++++++||||++|+.... + +..+ .+...+..+.+.+.|++.|. +...
T Consensus 81 ~~~~~~~~~GvTTvvd~~~~~-~---------------------------~~~~-~~~~~~~~~~~~~~Gv~~~~-~~~~ 130 (388)
T PRK10657 81 VQLSDLTEAGITTVVGLLGTD-G---------------------------ITRS-MESLLAKARALEEEGISAYM-YTGS 130 (388)
T ss_pred HHHHHHHhCCceEEECCCCCC-C---------------------------CCCC-HHHHHHHHHHHHhhCCEEEE-EecC
Confidence 788999999999999975221 0 1111 11122223333355777773 2221
Q ss_pred CCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCC-
Q psy10113 175 KGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCP- 253 (596)
Q Consensus 175 ~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p- 253 (596)
+......+.+.+.. ++ ...+++...|-..+..|...++.+.+..++.+....++..+++
T Consensus 131 ---~~~~~~~~~~~~~~--~~---------------~~~~~~~g~g~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~ 190 (388)
T PRK10657 131 ---YHVPVRTITGSIRK--DI---------------VLIDKVIGVGEIAISDHRSSQPTVEELARLAAEARVGGLLSGKA 190 (388)
T ss_pred ---CCCCchhhhcchhh--ce---------------ehhhhhhCcceeeeccCCCCCCCHHHHHHHHHHHHHHHHhcCCC
Confidence 11111111111110 00 0111122122333444544555555666666776666666653
Q ss_pred -eEEEecC-cHHHHHHHHHH-HHHHhhcCCceeeEEeeccceeecCCCCCCCc--cccccccc----cCCCCCCCC--Cc
Q psy10113 254 -LYVVHIM-SKAAGDAMAYK-RKELMKKGKHCTLYGETLAAAVGTHANQIPCT--WHDQAAHV----LSPPLRPDE--TT 322 (596)
Q Consensus 254 -~~i~hv~-s~~~~~~i~~a-~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~--~~~~~~~~----~~Pplr~~~--~~ 322 (596)
.+++|++ +....+.+.++ ++. |+ .++. ++++|+..++...... ......+. ..||++... ..
T Consensus 191 ~~i~vH~~~~~~~l~~v~~~l~~~----Gv--~~~~-~~~~H~~~~~~~~~~~~~~~~~G~~~~v~~~~~~~~~~~~~~~ 263 (388)
T PRK10657 191 GIVHVHMGDGKKGLQPLFELLENT----DI--PISQ-FLPTHVNRNEPLFEQALEFAKKGGVIDLTTSDPDFLGEGEVAP 263 (388)
T ss_pred CEEEEEeCCchHHHHHHHHHHHhc----CC--Ccce-eeCcccCCCHHHHHHHHHHHHcCCeEEEecCCCcccccCccCH
Confidence 7778988 57777777444 566 88 7774 8888877643321111 11111122 567766532 33
Q ss_pred HHHHHHHHhcCC---ccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHH
Q psy10113 323 PTHLLTLLNENA---LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAK 399 (596)
Q Consensus 323 ~~~l~~~l~~G~---~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak 399 (596)
.+.++++++.|. .++++||++..+..... +.. ..+.|.++++..+..+. .++...+++++++++++|.|||+
T Consensus 264 ~~~l~~~~~~G~~~d~v~l~tD~~~~~~~~~~--~g~--~~~~g~~~~~~l~~~~~-~~~~~~gis~~~~l~~aT~npA~ 338 (388)
T PRK10657 264 AEALKRALEAGVPLSRVTLSSDGNGSLPKFDE--DGN--LVGLGVGSVESLLEEVR-ELVKDEGLPLEDALKPLTSNVAR 338 (388)
T ss_pred HHHHHHHHHcCCChhheEEECCCCCCCceecc--CCC--EeccCcCchhhHHHHHH-HHHHhcCCCHHHHHHHHHHHHHH
Confidence 588999999997 67999998644321111 111 15677777766555555 45556789999999999999999
Q ss_pred HcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceee
Q psy10113 400 IFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRV 470 (596)
Q Consensus 400 ~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~ 470 (596)
+|++++ +|+|++|++||||+||.+ . .+..|+++|++|++||++..
T Consensus 339 ~lg~~~-~G~l~~G~~AD~vv~~~~-~------------------------~~~~~~~~G~~v~~~~~~~~ 383 (388)
T PRK10657 339 FLKLNG-KGEILPGKDADLLVLDDD-L------------------------RIEQVIAKGKLMVKDGKALV 383 (388)
T ss_pred HhCCCC-CCccCCCCccCEEEECCC-C------------------------CEEEEEECCEEEEECCEEec
Confidence 999976 899999999999999932 1 36799999999999998753
No 41
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=100.00 E-value=1.7e-33 Score=293.42 Aligned_cols=328 Identities=15% Similarity=0.098 Sum_probs=256.3
Q ss_pred EEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCc--eeeeeccccc
Q psy10113 68 YVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKV--CCDYALHVGI 145 (596)
Q Consensus 68 ~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~ 145 (596)
+.+|-=-|+|+|+.+. ++...+.-+...|||++++|....+.....+.++.+.+.+.... .++|++++.+
T Consensus 2 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~vt~vv~mPnt~P~~~~~e~~~~~~~~~~~~s~~~vDf~~~~~v 73 (341)
T TIGR00856 2 LTIRRPDDWHLHLRDG--------AMLKAVLPYTSEIFSRAIVMPNLAPPVTTVEAAVAYRERILDAVPAGHDFTPLMTL 73 (341)
T ss_pred ceecCccceeeeccCc--------hHHHHHHHHHHhhcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcceEEEEEE
Confidence 4566778999999653 44455666777889999999776666555677788777776655 4689998888
Q ss_pred cCCChhHHHHHHHHHHHcCCCEEEEEeecCC---CccC-CHHHHHHHHHHHHhcCCeEEEecCchh-hhHHHHHHHHHcC
Q psy10113 146 TWWSDQVQQEMAELCEKHGVNSFKTFMAYKG---LYML-SDGELYDAFSAIKNLGAIAMVHAENGE-IIDKNTQKLLAAG 220 (596)
Q Consensus 146 ~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~---~~~~-~~~~l~~~~~~a~~~g~~~~vHae~~~-~i~~~~~~l~~~G 220 (596)
..+.+...+++++++++.|+.+||+|+.+.+ .... +++.++++++.|+++|+++.+|+|+.. .+...
T Consensus 74 ~~~~~~~~~Ei~~l~~~~Gv~g~Klf~~~~~~~~~~~v~dd~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~~-------- 145 (341)
T TIGR00856 74 YLTDSLTPEELERAKNEGVVRAVKLYPAGATTNSSHGVTDIDAIMPVLEAMEKIGLPLLLHGEVTHGDIDIF-------- 145 (341)
T ss_pred ECCCCCCHHHHHHHHHcCCeEEEEEccCCcccCCCcCCCCHHHHHHHHHHHHHcCCeEEEeecCCCCCcccc--------
Confidence 6655545688988876669999999975322 1223 458999999999999999999999852 11100
Q ss_pred CCCCCcccCCChHHHHHHHHHH-HHHHhc-ccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCC
Q psy10113 221 IKGPEGHQLSRPEEVEAEAVTR-ACTIAN-QVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHAN 298 (596)
Q Consensus 221 i~~~~~~~~~~p~~~e~~a~~~-~i~la~-~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~ 298 (596)
. .|..++.+ ...+|. ..++++|++|+++.++.+++++++ + .|++|+|++||.++..
T Consensus 146 -----------~--~e~~a~~~~i~~lA~~~~~~~~~i~H~st~~~~~~i~~a~------~---~vt~E~~ph~L~l~~~ 203 (341)
T TIGR00856 146 -----------D--REARFIESVLEPLRQRFPALKVVLEHITTKDAIDYVEDGN------N---RLAATITPQHLMFTRN 203 (341)
T ss_pred -----------c--chhhhhHHHHHHHHHHccCCeEEEEecCcHHHHHHHHHcC------C---CEEEEEcHHHHhccHH
Confidence 0 02233333 335554 569999999999999999998773 2 5999999999999998
Q ss_pred CCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCcc-EEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHh
Q psy10113 299 QIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQ-TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEK 377 (596)
Q Consensus 299 ~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~-~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~ 377 (596)
++... .++..++++||+|. .+++++||+.+.+|.+. +++|||+|++..+|.. ..+|+|++|+|..+++++..
T Consensus 204 ~~~~~-~~~~~~k~~PPlR~-~~d~~aL~~~l~~G~id~~i~SDHaP~~~~~K~~-----~~~~~G~~g~e~~l~~~~~~ 276 (341)
T TIGR00856 204 DLLGG-GVNPHLYCLPILKR-NIHQQALLELAASGFPKFFLGTDSAPHARHRKES-----SCGCAGCFSAPTALPSYAEV 276 (341)
T ss_pred HHhcc-CCCCceEEeCCCCC-HHHHHHHHHHHHcCCCCEEEeCCCCCCChhHcCC-----CCCCCCcccHHHHHHHHHHH
Confidence 86431 02456889999998 68999999999999999 6999999999888753 24899999999999998853
Q ss_pred hccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcc-cCeEeeeeE
Q psy10113 378 GVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIF-EGLVCHGVP 452 (596)
Q Consensus 378 ~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~-~g~~~~g~~ 452 (596)
+ .++++++++++++|+||||+||+ ++ | +|||+|+ +..++++.+.+++...|+|| .|.++.|+|
T Consensus 277 -~-~~~~~l~~~v~~~s~nPAk~~gl-~~-~------dAdi~~~--~~~~~i~~~~~~s~~~~sp~~~~~~~~~~v 340 (341)
T TIGR00856 277 -F-EEMNALENLEAFCSDNGPQFYGL-PV-N------STKIELV--KKEQQIPESIALTDDTLVPFRAGETLSWSV 340 (341)
T ss_pred -H-hcCCCHHHHHHHHhHhHHHHhCC-CC-C------CceEEEE--eccEEeCchhccCCCCcccccCCcccceee
Confidence 3 34799999999999999999999 54 3 8999999 57899999999999999999 666666655
No 42
>PRK06380 metal-dependent hydrolase; Provisional
Probab=100.00 E-value=8.8e-32 Score=290.57 Aligned_cols=371 Identities=20% Similarity=0.286 Sum_probs=231.1
Q ss_pred ccEEEEccEEEcCCC---ceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccC---------
Q psy10113 19 NRLLIKNGKVVNADK---ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG--------- 86 (596)
Q Consensus 19 ~~llIkng~Iv~~d~---~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~--------- 86 (596)
|+++|+|++|++.+. ..+++|+|+||+|++||+... .+.++||++|++|+|||||+|+|+.+....
T Consensus 1 m~~li~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~--~~~~viD~~g~~v~PG~Vd~H~Hl~~~~~rg~~~~~~l~ 78 (418)
T PRK06380 1 MSILIKNAWIVTQNEKREILQGNVYIEGNKIVYVGDVNE--EADYIIDATGKVVMPGLINTHAHVGMTASKGLFDDVDLE 78 (418)
T ss_pred CeEEEEeeEEEECCCCceeeeeeEEEECCEEEEecCCCC--CCCEEEECCCCEEccCEEeeccCCCccccCCcccCCCHH
Confidence 458999999997642 347899999999999998543 356899999999999999999998654221
Q ss_pred -----------CCCcchHHH----HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCC---
Q psy10113 87 -----------ATSVDDFYH----GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWW--- 148 (596)
Q Consensus 87 -----------~~~~d~~~~----g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~--- 148 (596)
..+.++++. +...++++||||+.|+.... +.+.+++++. +.+...+...--..+
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~~~~--~~~~~a~~~~------G~r~~~~~~~~~~~~~~~ 150 (418)
T PRK06380 79 EFLMKTFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLYYSE--DIIAKAAEEL------GIRAFLSWAVLDEEITTQ 150 (418)
T ss_pred HHHHHHHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEccccCh--HHHHHHHHHh------CCeEEEecccccCCcccc
Confidence 234444443 34456899999999985321 1222222221 222222211110011
Q ss_pred ChhHHHHHHHHHHH-cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcc
Q psy10113 149 SDQVQQEMAELCEK-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGH 227 (596)
Q Consensus 149 ~~~~~~e~~~lv~~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~ 227 (596)
.....++.+.+++. .+...++..+++++.+.++++++.++++.|+++|+++++|+.+.. .+......+.|.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~--~~~~~~~~~~g~~~---- 224 (418)
T PRK06380 151 KGDPLNNAENFIREHRNEELVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSETR--KEVYDHVKRTGERP---- 224 (418)
T ss_pred cchHHHHHHHHHHHhcCCCCeEEEEECCCCccCCHHHHHHHHHHHHHcCCCEEEEeCCcH--HHHHHHHHHhCCCH----
Confidence 11122333444432 222346677788888889999999999999999999999986542 11112222334321
Q ss_pred cCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceee-EEeeccceeecCCCCCCCcccc
Q psy10113 228 QLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTL-YGETLAAAVGTHANQIPCTWHD 306 (596)
Q Consensus 228 ~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v-~~e~~~~~l~~~~~~~~~~~~~ 306 (596)
.+ .+......+.++.+.|+..-.. +.++..++. |. .+ +++.....+..
T Consensus 225 ---------ie----~~~~~g~l~~~~~~~H~~~l~~-~d~~~la~~----g~--~v~~~P~sn~~l~~----------- 273 (418)
T PRK06380 225 ---------VE----HLEKIGFLNSKLIAAHCVWATY-HEIKLLSKN----GV--KVSWNSVSNFKLGT----------- 273 (418)
T ss_pred ---------HH----HHHHCCCCCCCeEEEEeecCCH-HHHHHHHHc----CC--EEEECHHHHHhhcc-----------
Confidence 01 1111233455666777765432 335555555 76 32 23222111100
Q ss_pred ccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhcc--CCCC
Q psy10113 307 QAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVV--PGIL 384 (596)
Q Consensus 307 ~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~--~~~l 384 (596)
...+|+ .++++.|+.+++|||....+....++ -++++...+.+... ...+
T Consensus 274 ----~g~~p~----------~~~~~~Gv~v~lGTD~~~~~~~~d~~--------------~~~~~~~~~~~~~~~~~~~~ 325 (418)
T PRK06380 274 ----GGSPPI----------PEMLDNGINVTIGTDSNGSNNSLDMF--------------EAMKFSALSVKNERWDASII 325 (418)
T ss_pred ----CCCCcH----------HHHHHCCCeEEEcCCCCcCCCCcCHH--------------HHHHHHHHHhhhccCCCCcC
Confidence 012233 37899999999999974332211111 03444433332221 1248
Q ss_pred CHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeee---eEEEEEECCEE
Q psy10113 385 SPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG---VPEYVIVGGRV 461 (596)
Q Consensus 385 ~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g---~~~~Vi~~Grv 461 (596)
++.++++++|.|+|++||+ +.|+|++|+.||||++|.+.+...+.. ..+|+..+.+.+ .|..||++|++
T Consensus 326 ~~~~~l~~aT~~gA~~lg~--~~G~l~~G~~ADlvv~d~~~~~~~p~~------~~~~~~~lv~~~~~~~v~~v~v~G~~ 397 (418)
T PRK06380 326 KAQEILDFATINAAKALEL--NAGSIEVGKLADLVILDARAPNMIPTR------KNNIVSNIVYSLNPLNVDHVIVNGKI 397 (418)
T ss_pred CHHHHHHHHHHHHHHHhCC--CCCccCCCccCCEEEEeCCCCccCCCC------ccChHHheeecCCCCceeEEEECCEE
Confidence 9999999999999999999 389999999999999998865544421 235666666554 69999999999
Q ss_pred EEECCceeecC
Q psy10113 462 CVDEGNLRVAQ 472 (596)
Q Consensus 462 V~~dG~~~~~~ 472 (596)
|++||+++...
T Consensus 398 v~~~g~~~~~d 408 (418)
T PRK06380 398 LKENGRLNGFN 408 (418)
T ss_pred EEECCeECccC
Confidence 99999987644
No 43
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=100.00 E-value=4.9e-32 Score=295.16 Aligned_cols=373 Identities=18% Similarity=0.213 Sum_probs=231.8
Q ss_pred EEEEccEEEcCCC----ceeeeEEEECCeEEEeccCCCCC-CCCeEEEcCCCEEeeCccccccCCCccccCC--------
Q psy10113 21 LLIKNGKVVNADK----ISDLDIYIENGVIQQLGRNLIVP-GGVRVIDAAGSYVIPGGIDPHTHFELELMGA-------- 87 (596)
Q Consensus 21 llIkng~Iv~~d~----~~~~dV~IedG~I~~Ig~~~~~~-~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~-------- 87 (596)
+++.|+.|++.+. ..+++|+|+||+|++|++..+.+ ++.++||++|++|||||||+|+|+.+.+...
T Consensus 4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~~~vID~~g~~v~PGlVn~H~H~~~~~~~g~~~~~~~~ 83 (451)
T PRK08203 4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALPQPADEVFDARGHVVTPGLVNTHHHFYQTLTRALPAAQDAE 83 (451)
T ss_pred EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCCCCCCeEEeCCCCEEecceEeccccccchhcccccccCCCc
Confidence 4555578988764 34689999999999999975543 3678999999999999999999996642211
Q ss_pred --------------CCcchHHH----HHHHHHhCCceEEeccccCCCC---ccHHHHHHHHHHHhccCceeeeec-----
Q psy10113 88 --------------TSVDDFYH----GTKAAVAGGTTTIIDFALPRKG---ESLIKTYESWRQKADEKVCCDYAL----- 141 (596)
Q Consensus 88 --------------~~~d~~~~----g~~~al~~GtTti~D~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~----- 141 (596)
+++++++. +...++++||||++|+....+. ..+..+.+...+... +....+..
T Consensus 84 ~~~~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~a~~~~G~-R~~~~~~~~~~~~ 162 (451)
T PRK08203 84 LFPWLTTLYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGM-RFHATRGSMSLGE 162 (451)
T ss_pred HHHHHHHHhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccccchHHHHHHHHHHcCC-eEEEecceeecCC
Confidence 12333333 4456689999999998632221 123333333333321 12111111
Q ss_pred -cccc--cC---CChhHHHHHHHHHHHc-C---CCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCch-hhhH
Q psy10113 142 -HVGI--TW---WSDQVQQEMAELCEKH-G---VNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENG-EIID 210 (596)
Q Consensus 142 -~~~~--~~---~~~~~~~e~~~lv~~~-G---v~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~-~~i~ 210 (596)
+... .. ..++..++..++++.. + ...++..++.++.+.++++++.++++.|+++|+++.+|+.+. ..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~ 242 (451)
T PRK08203 163 SDGGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRLGVRLHTHLAETLDEEA 242 (451)
T ss_pred ccCCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHH
Confidence 0000 11 1123344555555431 1 145777788888788999999999999999999999997432 2111
Q ss_pred HHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeE-Eeec
Q psy10113 211 KNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLY-GETL 289 (596)
Q Consensus 211 ~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~-~e~~ 289 (596)
.. +...|.. | .+ +. .-....+.++.+.|+..-.. +.++.+++. |+ .+. +...
T Consensus 243 ~~---~~~~g~~---------~----~~---~l-~~~g~l~~~~~~~H~~~l~~-~~~~~la~~----g~--~v~~~P~~ 295 (451)
T PRK08203 243 FC---LERFGMR---------P----VD---YL-EDLGWLGPDVWLAHCVHLDD-AEIARLART----GT--GVAHCPCS 295 (451)
T ss_pred HH---HHHhCCC---------H----HH---HH-HHcCCCCCCeEEEEEeCCCH-HHHHHHHhc----CC--eEEECcHH
Confidence 11 1112221 1 01 11 11223345666667664332 235555555 76 432 2211
Q ss_pred cceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHH
Q psy10113 290 AAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQD 369 (596)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~ 369 (596)
...+ . ...+| +..+++.|+.+++|||.+..+.....+ -+.
T Consensus 296 ~~~l-------------~---~~~~~----------~~~~~~~Gv~v~lGtD~~~~~~~~~~~--------------~~~ 335 (451)
T PRK08203 296 NMRL-------------A---SGIAP----------VRELRAAGVPVGLGVDGSASNDGSNLI--------------GEA 335 (451)
T ss_pred hhhh-------------c---cCCCC----------HHHHHHCCCeEEEecCCCccCCCcCHH--------------HHH
Confidence 1110 0 01122 347899999999999986533211111 144
Q ss_pred HHHHHHHhhcc-CCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEe
Q psy10113 370 RLSVIWEKGVV-PGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVC 448 (596)
Q Consensus 370 ~~~~~~~~~v~-~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~ 448 (596)
++...+.+... ...+++.++++++|.|||+++|++ .+|+|++|+.|||||+|.+.+.. ....+||+++.+
T Consensus 336 ~~~~~~~~~~~~~~~i~~~~~l~~~T~~~A~~lg~~-~~G~l~~G~~ADlvv~d~~~~~~--------~~~~~p~~~l~~ 406 (451)
T PRK08203 336 RQALLLQRLRYGPDAMTAREALEWATLGGARVLGRD-DIGSLAPGKLADLALFDLDELRF--------AGAHDPVAALVL 406 (451)
T ss_pred HHHHHHhhcccCCCCCCHHHHHHHHHHHHHHHhCCC-CCCCcCCCCccCEEEEcCCcccc--------CCccChHHHHHc
Confidence 55555544322 346999999999999999999996 78999999999999999986522 223578877765
Q ss_pred --eeeEEEEEECCEEEEECCceee
Q psy10113 449 --HGVPEYVIVGGRVCVDEGNLRV 470 (596)
Q Consensus 449 --~g~~~~Vi~~GrvV~~dG~~~~ 470 (596)
.+.|..||++|++||++|++..
T Consensus 407 ~~~~~v~~v~v~G~~v~~~~~~~~ 430 (451)
T PRK08203 407 CGPPRADRVMVGGRWVVRDGQLTT 430 (451)
T ss_pred cCCCCccEEEECCEEEEECCcccC
Confidence 3589999999999999998764
No 44
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=100.00 E-value=6.4e-33 Score=296.90 Aligned_cols=362 Identities=22% Similarity=0.234 Sum_probs=236.7
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCC------------CCCCCeEEEcCCCEEeeCccccccCCCcccc
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLI------------VPGGVRVIDAAGSYVIPGGIDPHTHFELELM 85 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~------------~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~ 85 (596)
.++++|+|++|+|......+||+|+||+|++|++... ...+.++||++|++|+|||||+|+|+..|..
T Consensus 64 ~~DlVI~Na~IiD~~gi~~adI~IkdGrIvaIG~agnp~~~~~v~~~~~~g~~teVIDaeG~iV~PG~ID~HvH~~~P~~ 143 (567)
T cd00375 64 VLDLVITNALIIDYTGIYKADIGIKDGRIVAIGKAGNPDIMDGVTPNMIVGPSTEVIAGEGKIVTAGGIDTHVHFICPQQ 143 (567)
T ss_pred cCCEEEECeEEECCCCcEEEEEEEECCEEEEEecCCCccccccccccccCCCCCeEEECCCCEEeeceEECccCCCCccH
Confidence 4689999999999776778999999999999997421 1135789999999999999999999865421
Q ss_pred CCCCcchHHHHHHHHHhCCceEEeccccC-------CCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHH
Q psy10113 86 GATSVDDFYHGTKAAVAGGTTTIIDFALP-------RKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAE 158 (596)
Q Consensus 86 ~~~~~d~~~~g~~~al~~GtTti~D~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 158 (596)
.++|+++||||++++... .+.....+.++...+.++ ...++++++.... .+..+++.+
T Consensus 144 -----------~~aAlagGVTTvI~~G~gP~~gtnatp~t~g~~~l~~ml~aa~-~~pin~g~~gkg~---~~~l~eL~e 208 (567)
T cd00375 144 -----------IEEALASGITTMIGGGTGPAAGTKATTCTPGPWNIKRMLQAAD-GLPVNIGFLGKGN---GSSPDALAE 208 (567)
T ss_pred -----------HHHHHcCCCcEEEcCCcCcccccCCCCCCCCHHHHHHHHHHhh-cCCceEEEEecCc---cccHHHHHH
Confidence 478999999999996221 122222355555555555 3468888876432 344567777
Q ss_pred HHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHH
Q psy10113 159 LCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAE 238 (596)
Q Consensus 159 lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~ 238 (596)
+++ .|+.+||.+.+| ..++..+.++++.|++++.++.+|++..... ..+ |
T Consensus 209 ~~~-aGA~GfK~~eD~----g~t~~~i~~aL~~A~~~dv~VaiHadtlne~-----------------------g~~--E 258 (567)
T cd00375 209 QIE-AGACGLKLHEDW----GATPAAIDTCLSVADEYDVQVAIHTDTLNES-----------------------GFV--E 258 (567)
T ss_pred HHH-cCCEEEEecCCC----CCCHHHHHHHHHHHHhhCCEEEEECCCCCcc-----------------------hHH--H
Confidence 764 599999988665 3589999999999999999999999874311 001 1
Q ss_pred HHHHHHHHhcccCCCeEEEecCc---HHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCC
Q psy10113 239 AVTRACTIANQVDCPLYVVHIMS---KAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPP 315 (596)
Q Consensus 239 a~~~~i~la~~~~~p~~i~hv~s---~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pp 315 (596)
. .++...+.++|+.|..+ ..+.+.|+.+... .+.|.-+..+.+....+-+.|+.-- -.++-.+|.
T Consensus 259 ----~-t~aa~~gr~iH~~H~egaggghapdi~~~~~~~----nvlp~stnpt~p~t~nt~~e~~dm~---m~~h~l~~~ 326 (567)
T cd00375 259 ----D-TIAAIKGRTIHTYHTEGAGGGHAPDIIKVAGHP----NVLPSSTNPTRPFTVNTLDEHLDML---MVCHHLDPN 326 (567)
T ss_pred ----H-HHHHhcCCeEEEEecCCCCcccchHHHHhcCCC----CcccCCCCCCCCCccCchhhhcCeE---EeecCCCCC
Confidence 1 34566799999999985 3566677666444 4555444555555444333333211 112222332
Q ss_pred CCCC---------CCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcch-HHHHHHHHHhhccC---C
Q psy10113 316 LRPD---------ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGV-QDRLSVIWEKGVVP---G 382 (596)
Q Consensus 316 lr~~---------~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~-e~~~~~~~~~~v~~---~ 382 (596)
+-.| +++..+---+-+.|+..+++||......- -+.+... +..-....+.+... .
T Consensus 327 ~~~d~~fa~srir~~ti~ae~~l~d~G~~s~~~sDs~~mgr~------------ge~~~r~~q~a~k~~~~~g~~~~~~~ 394 (567)
T cd00375 327 IPEDVAFAESRIRAETIAAEDVLHDLGAISIMSSDSQAMGRV------------GEVILRTWQTAHKMKAQRGPLPEDSG 394 (567)
T ss_pred CcchhhhhhhhccchhhccchhhhccCcEEEEccchhhcCcc------------ceeeechHHHHHHHHHhcCCCCcccc
Confidence 2111 22322222244579999999997421100 0000000 00001111111111 1
Q ss_pred CCCHHH---HHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECC
Q psy10113 383 ILSPEK---FVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGG 459 (596)
Q Consensus 383 ~l~~~e---~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~G 459 (596)
..+..+ .|++.|.|||+++|+++++|+|++||.||||||+++. | + .++..||++|
T Consensus 395 ~~~n~r~~~~L~~~Tin~A~alG~~~~vGSLe~GK~ADlVv~d~~~-----------------f-~----~~p~~vi~~G 452 (567)
T cd00375 395 DADNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWEPAF-----------------F-G----VKPEMVLKGG 452 (567)
T ss_pred cCchHHHHHHHHHhhHHHHHHcCcccCceeeCCCCccCEEEEcCcc-----------------c-C----CCeeEEEECC
Confidence 245544 4999999999999999999999999999999999762 1 1 1468999999
Q ss_pred EEEEEC-Cceee
Q psy10113 460 RVCVDE-GNLRV 470 (596)
Q Consensus 460 rvV~~d-G~~~~ 470 (596)
++||.. |....
T Consensus 453 ~iv~~~~gd~na 464 (567)
T cd00375 453 FIAYAQMGDPNA 464 (567)
T ss_pred EEEEecCCCccc
Confidence 999987 76554
No 45
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=7.3e-32 Score=293.06 Aligned_cols=372 Identities=19% Similarity=0.232 Sum_probs=229.0
Q ss_pred ccccEEEEccEEEcCCC----ceeeeEEEECCeEEEeccCCCC---CCCCeEEEcCCCEEeeCccccccCCCccccC-C-
Q psy10113 17 SQNRLLIKNGKVVNADK----ISDLDIYIENGVIQQLGRNLIV---PGGVRVIDAAGSYVIPGGIDPHTHFELELMG-A- 87 (596)
Q Consensus 17 ~~~~llIkng~Iv~~d~----~~~~dV~IedG~I~~Ig~~~~~---~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~-~- 87 (596)
++.+++|+|+.|++.+. ..+++|+|+||+|++||+.... +++.++||++|++|||||||+|+|+.+.... .
T Consensus 5 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~g~~ 84 (443)
T PRK09045 5 EPVDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARYAAAETVELPDHVLIPGLINAHTHAAMSLLRGLA 84 (443)
T ss_pred ccccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCcccccccCCcceEEeCCCCEEecCEeccccChhhHhhhhcc
Confidence 45689999999998652 2368999999999999985433 2357899999999999999999998653210 0
Q ss_pred --------------------CCcchHH----HHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc
Q psy10113 88 --------------------TSVDDFY----HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV 143 (596)
Q Consensus 88 --------------------~~~d~~~----~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 143 (596)
.+.++.+ .+...++++||||+.|+... .....+. ..+.+.+..++...
T Consensus 85 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~~~-----~~~~~~~---~~~~G~R~~~~~~~ 156 (443)
T PRK09045 85 DDLPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMYFF-----PEAAAEA---AHQAGMRAQIGMPV 156 (443)
T ss_pred CCCCHHHHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecccc-----HHHHHHH---HHHcCCeEEEeccc
Confidence 1222222 24456689999999997421 1111111 12222222222211
Q ss_pred -ccc-CCC---hhHHHHHHHHHHH-cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHH
Q psy10113 144 -GIT-WWS---DQVQQEMAELCEK-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLL 217 (596)
Q Consensus 144 -~~~-~~~---~~~~~e~~~lv~~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~ 217 (596)
..+ .+. ++..++...+.+. .+...+++.+++++.+.++++++.++++.|+++|+++.+|+.... ......+
T Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~---~~~~~~~ 233 (443)
T PRK09045 157 LDFPTAWASDADEYLAKGLELHDQWRHHPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLHETA---QEIADSL 233 (443)
T ss_pred ccCCCccccCHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCEEEeecCcH---HHHHHHH
Confidence 111 111 1222222233322 456678888888888889999999999999999999999985321 1111111
Q ss_pred H-cCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeE-Eeeccceeec
Q psy10113 218 A-AGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLY-GETLAAAVGT 295 (596)
Q Consensus 218 ~-~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~-~e~~~~~l~~ 295 (596)
+ .|.. | .+ +. .-....+-+..+.|+..-.. +.++..++. |+ .+. +......+
T Consensus 234 ~~~g~~---------~----~~---~l-~~~g~l~~r~~~~H~~~l~~-~~~~~la~~----g~--~i~~~P~~~~~~-- 287 (443)
T PRK09045 234 KQHGQR---------P----LA---RL-ARLGLLGPRLIAVHMTQLTD-AEIALLAET----GC--SVVHCPESNLKL-- 287 (443)
T ss_pred HHhCCC---------H----HH---HH-HHcCCCCCCeEEEEecCCCH-HHHHHHHHc----CC--eEEECHHHHhhh--
Confidence 1 2321 1 11 11 11223344566667664332 234555555 76 322 11111000
Q ss_pred CCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHH
Q psy10113 296 HANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIW 375 (596)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~ 375 (596)
......+..+++.|+.+++|||++..+.....+ -+.++..++
T Consensus 288 ------------------------~~~~~~~~~l~~~Gv~v~lGtD~~~~~~~~~~~--------------~~~~~a~~~ 329 (443)
T PRK09045 288 ------------------------ASGFCPVAKLLQAGVNVALGTDGAASNNDLDLF--------------GEMRTAALL 329 (443)
T ss_pred ------------------------ccCCCcHHHHHHCCCeEEEecCCCCCCCCccHH--------------HHHHHHHHH
Confidence 001112347889999999999987543222211 145555555
Q ss_pred Hhhcc--CCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeE---eee
Q psy10113 376 EKGVV--PGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLV---CHG 450 (596)
Q Consensus 376 ~~~v~--~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~---~~g 450 (596)
.+... ...++++++++++|.|||+++|+++++|+|++|+.|||||||.+.....+. +++++.+. ...
T Consensus 330 ~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~p~--------~~~~~~lv~~~~~~ 401 (443)
T PRK09045 330 AKAVAGDATALPAHTALRMATLNGARALGLDDEIGSLEPGKQADLVAVDLSGLETQPV--------YDPVSQLVYAAGRE 401 (443)
T ss_pred HhhccCCCCcCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEeCCCCCcCCc--------cChHhHhhEeCCCC
Confidence 44332 346899999999999999999998889999999999999999885422221 12333222 234
Q ss_pred eEEEEEECCEEEEECCceeec
Q psy10113 451 VPEYVIVGGRVCVDEGNLRVA 471 (596)
Q Consensus 451 ~~~~Vi~~GrvV~~dG~~~~~ 471 (596)
.|..||++||+||++|++...
T Consensus 402 ~v~~v~v~G~~v~~~g~~~~~ 422 (443)
T PRK09045 402 QVSHVWVAGKQLLDDRELTTL 422 (443)
T ss_pred CccEEEECCEEEEECCcCCCC
Confidence 799999999999999987653
No 46
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=2.9e-32 Score=294.90 Aligned_cols=359 Identities=18% Similarity=0.161 Sum_probs=238.6
Q ss_pred cccEEEEccEEEcC-CCceeeeEEEECCeEEEeccCCCC------------CCCCeEEEcCCCEEeeCccccccCCCccc
Q psy10113 18 QNRLLIKNGKVVNA-DKISDLDIYIENGVIQQLGRNLIV------------PGGVRVIDAAGSYVIPGGIDPHTHFELEL 84 (596)
Q Consensus 18 ~~~llIkng~Iv~~-d~~~~~dV~IedG~I~~Ig~~~~~------------~~~~~vIDa~G~~V~PG~ID~HtHl~~~~ 84 (596)
..+++|+|++|+|+ .....+||.|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..|.
T Consensus 67 ~~DlVI~Ng~ViD~~~gi~kaDI~IkdGrI~aIG~~~~p~~~~~v~~~~~~g~~tevIDa~G~iVtPG~ID~HvH~~~P~ 146 (572)
T PRK13309 67 VLDLVITNVTIVDARLGVIKADVGIRDGKIVGIGKSGNPSTMDGVTQGMVVGVSTDAISGEHLILTAAGIDTHIHLISPQ 146 (572)
T ss_pred cCCEEEECeEEEcCCCCEEEEEEEEECCEEEEecCCCccccccccccccccCCCceEEECCCCEEEeCEEEeecccCCcc
Confidence 35799999999985 456789999999999999974321 11478999999999999999999986653
Q ss_pred cCCCCcchHHHHHHHHHhCCceEEeccc-------cCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHH
Q psy10113 85 MGATSVDDFYHGTKAAVAGGTTTIIDFA-------LPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMA 157 (596)
Q Consensus 85 ~~~~~~d~~~~g~~~al~~GtTti~D~~-------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 157 (596)
. .++|+++||||++++. .+.+.......++...+.++ ...++++++... +... ..++.
T Consensus 147 ~-----------~~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~~a~-~~pvn~g~~gkg--~~~~-~~~l~ 211 (572)
T PRK13309 147 Q-----------AYHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLRSIE-GLPVNVGILGKG--NSYG-RGPLL 211 (572)
T ss_pred h-----------HHHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHhc-cCCcCEEEEcCC--CCCC-HHHHH
Confidence 1 3579999999999642 11111222334444444444 345778877533 3222 36677
Q ss_pred HHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHH
Q psy10113 158 ELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEA 237 (596)
Q Consensus 158 ~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~ 237 (596)
+++ +.|+.+||.+.+| ..+++.+.++++.|++++.++.+|+++.... .. .
T Consensus 212 el~-~aGa~gfk~~~d~----g~t~~~L~~aLe~A~~~gv~VaiH~d~lnE~-----------------------g~--v 261 (572)
T PRK13309 212 EQA-IAGVAGYKVHEDW----GATAAALRHALRVADEVDIQVAVHTDSLNEC-----------------------GY--V 261 (572)
T ss_pred HHH-hcCcEEEEecCcC----CcCHHHHHHHHHHHHhcCCEEEEeCCccccc-----------------------hh--H
Confidence 765 4599999987655 2488999999999999999999999874311 01 1
Q ss_pred HHHHHHHHHhcccCCCeEEEecCc---HHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCC
Q psy10113 238 EAVTRACTIANQVDCPLYVVHIMS---KAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSP 314 (596)
Q Consensus 238 ~a~~~~i~la~~~~~p~~i~hv~s---~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~P 314 (596)
| .+ ++...+.|+|+.|..+ ..+.+.|+-+... .+.|.-+..+.+....+-+.|+.-- -.++-.+|
T Consensus 262 E----~~-~aa~~grpih~~H~~Gaggghapd~~~~~~~~----~~~~~st~pt~p~~~~~~~e~~~m~---m~~h~l~~ 329 (572)
T PRK13309 262 E----DT-IDAFEGRTIHTFHTEGAGGGHAPDIIKVASQT----NVLPSSTNPTLPYGVNSQAELFDMI---MVCHNLNP 329 (572)
T ss_pred H----HH-HHHhCCCceeeeeccCcccCCchhHHHhcCCC----CcccCCCCCCCCCcccchHhhhchh---hhhccCCC
Confidence 1 12 5566789999999874 4566777666444 4555444555555444333333211 11122222
Q ss_pred CCCC---------CCCcHHHHHHHHhcCCccEEeCCCCCC-----ChhhhhhCCCCCCcCCCCCcchHHHHHHHHHh---
Q psy10113 315 PLRP---------DETTPTHLLTLLNENALQTTGSDNCTF-----NKNQKELGKDSFTHIPNGVNGVQDRLSVIWEK--- 377 (596)
Q Consensus 315 plr~---------~~~~~~~l~~~l~~G~~~~~gsD~~~~-----~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~--- 377 (596)
.+-. ..+...++..+++.|+..+++||+... +... +++......-..
T Consensus 330 ~~~~D~~~a~srig~e~~~a~~~l~daGa~~~~gSD~pv~gr~~~~p~~----------------~iq~Av~rk~~~g~l 393 (572)
T PRK13309 330 NVPADVAFAESRVRPETIAAENVLHDMGVISMFSSDSQAMGRVGENWLR----------------AIQTADAMKAARGKL 393 (572)
T ss_pred CCCCChhHHHHhhCchhhcchhHHHhCCCEEEEcCCCCcccCCcccHHH----------------HHHHHHHHHhccCCC
Confidence 2111 134445666788999999999998642 1110 001000000000
Q ss_pred ---hccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEE
Q psy10113 378 ---GVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEY 454 (596)
Q Consensus 378 ---~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~ 454 (596)
......++..++|++.|.|||+++|+++++|+|++||.|||||||++ +|. ..+..
T Consensus 394 ~~~~~~~~~~~v~~aL~~yT~n~A~a~g~e~~~GsLe~Gk~ADlvvld~d-----------------~f~-----~~~~~ 451 (572)
T PRK13309 394 PEDAAGNDNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMADLVLWEPR-----------------FFG-----AKPKM 451 (572)
T ss_pred CccCCCcccccHHHHHHHHhHHHHHHcCcccCccccCCCCcCCEEEEchh-----------------hcC-----CCccE
Confidence 00135578899999999999999999999999999999999999976 221 14689
Q ss_pred EEECCEEEEEC-Cceeec
Q psy10113 455 VIVGGRVCVDE-GNLRVA 471 (596)
Q Consensus 455 Vi~~GrvV~~d-G~~~~~ 471 (596)
||++|++||.. |.....
T Consensus 452 vi~~G~iv~~~~gd~~as 469 (572)
T PRK13309 452 VIKGGMINWAAMGDPNAS 469 (572)
T ss_pred EEECCEEEEecCCCcccc
Confidence 99999999988 776543
No 47
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=2.9e-32 Score=293.38 Aligned_cols=363 Identities=19% Similarity=0.194 Sum_probs=240.1
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCC------------CCCCeEEEcCCCEEeeCccccccCCCcccc
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIV------------PGGVRVIDAAGSYVIPGGIDPHTHFELELM 85 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~------------~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~ 85 (596)
..+++|+|++|+|......+||.|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..|..
T Consensus 70 ~~DlVI~Na~IiD~~gi~~adI~IkDGrIvaIG~~~~p~~~~gv~~~~~ig~~tevIDaeG~iV~PG~ID~HVH~~~Pg~ 149 (573)
T PRK13206 70 APDTVITGAVILDHWGIVKADVGIRDGRIVAIGKAGNPDIMDGVHPDLVIGPSTEIIAGNGRILTAGAIDCHVHFICPQI 149 (573)
T ss_pred CCCEEEECeEEECCCCeEEEEEEEECCEEEEEeCCCCccccccccccccCCCCCEEEECCCCEEEeCEEeeeeccCCchH
Confidence 46899999999997777789999999999999974211 135789999999999999999999865421
Q ss_pred CCCCcchHHHHHHHHHhCCceEEeccccCC-C---C---ccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHH
Q psy10113 86 GATSVDDFYHGTKAAVAGGTTTIIDFALPR-K---G---ESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAE 158 (596)
Q Consensus 86 ~~~~~d~~~~g~~~al~~GtTti~D~~~~~-~---~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 158 (596)
.++|+++||||++++.... + . ......+..+.+.++ +..++|+++.....++ .+++.+
T Consensus 150 -----------~~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~l~~~~~aa~-~~pvn~g~~g~g~~~~---~~~L~e 214 (573)
T PRK13206 150 -----------VDEALAAGITTLIGGGTGPAEGSKATTVTPGAWHLARMLEALD-GWPVNVALLGKGNTVS---AEALWE 214 (573)
T ss_pred -----------HHHHHcCCeEEEEcCCCCccccCcccccccchhHHHHHHHHhh-cCceeEEEecCcCcCC---HHHHHH
Confidence 3789999999999963221 1 1 011112223333333 4678899887654443 346777
Q ss_pred HHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHH
Q psy10113 159 LCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAE 238 (596)
Q Consensus 159 lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~ 238 (596)
+++ .|+.+||.+.+| ..++++++++++.|+++|+++.+|+++.... |+ + |
T Consensus 215 l~~-aGA~GfKi~~d~----g~t~~~i~~aL~~A~~~gv~V~iHadtlne~----------g~-------------~--E 264 (573)
T PRK13206 215 QLR-GGAGGFKLHEDW----GSTPAAIDACLRVADAAGVQVALHSDTLNEA----------GF-------------V--E 264 (573)
T ss_pred HHH-CCCcEEeecCcc----CCCHHHHHHHHHHHHHhCCEEEEECCCcccc----------ch-------------h--h
Confidence 754 599999988654 3799999999999999999999999874311 10 0 1
Q ss_pred HHHHHHHHhcccCCCeEEEecCc---HHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCC
Q psy10113 239 AVTRACTIANQVDCPLYVVHIMS---KAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPP 315 (596)
Q Consensus 239 a~~~~i~la~~~~~p~~i~hv~s---~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pp 315 (596)
. .++...|.++|+.|+.+ ..+.++|+-+... .+.|.-+..+.+....+-+.|+.-- -.++-.+|.
T Consensus 265 ----~-t~aa~~gr~iH~~H~egaggghapd~~~~~~~~----n~lp~stnpt~p~~~nt~~e~~~m~---m~~h~l~~~ 332 (573)
T PRK13206 265 ----D-TLAAIAGRSIHAYHTEGAGGGHAPDIITVASHP----NVLPSSTNPTRPHTVNTLDEHLDML---MVCHHLNPA 332 (573)
T ss_pred ----H-HHHHhcCCeEEEEeccCCCcCcccHHHHhcCCC----CCcCCCCCCCCCCcccchhhhhCeE---EeeccCCCC
Confidence 1 34456699999999985 4567787777554 5555555555555444433333211 112222332
Q ss_pred CCCC---------CCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhh-----ccC
Q psy10113 316 LRPD---------ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKG-----VVP 381 (596)
Q Consensus 316 lr~~---------~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~-----v~~ 381 (596)
+..| +++..+--.+++.|+..+++||......-... ....+ +..-...-++. ...
T Consensus 333 ~~~d~~fa~srir~~ti~ae~~l~d~G~~~~~~SDs~~~~~~~e~-----~~~~~------q~a~~~~~rr~~l~g~~~~ 401 (573)
T PRK13206 333 VPEDLAFAESRIRPSTIAAEDVLHDMGAISMIGSDSQAMGRIGEV-----VLRTW------QTAHVMKRRRGALPGDGRA 401 (573)
T ss_pred CcchhhhhhhhccceeeccCchHhhCCcEEeccCCccccccccch-----hhhHH------HHHHHHHhccCCCCCCCcc
Confidence 2211 23333333467789999999998652110000 00000 00000000000 024
Q ss_pred CCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEE
Q psy10113 382 GILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRV 461 (596)
Q Consensus 382 ~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~Grv 461 (596)
..++..++|++.|.|||+++|++..+|+|++|+.||||+||++. |. -++..||++|++
T Consensus 402 ~~~~v~~al~~yT~nPA~alG~~~~~GsLe~Gk~ADlVvld~d~-----------------f~-----~~~~~ti~~G~i 459 (573)
T PRK13206 402 DNNRARRYVAKYTICPAVAHGIDHEIGSVEVGKLADLVLWEPAF-----------------FG-----VRPHAVLKGGAI 459 (573)
T ss_pred cchhHHHHHHHHHHHHHHHhCCCcCCcccCCCCcCCEEEECccc-----------------cC-----CCccEEEECCEE
Confidence 56899999999999999999998889999999999999999761 10 145799999999
Q ss_pred EEEC-Cceee
Q psy10113 462 CVDE-GNLRV 470 (596)
Q Consensus 462 V~~d-G~~~~ 470 (596)
+|.. |....
T Consensus 460 v~~~~gd~na 469 (573)
T PRK13206 460 AWAAMGDANA 469 (573)
T ss_pred EEecCCChhh
Confidence 9976 54433
No 48
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=100.00 E-value=5.6e-32 Score=289.25 Aligned_cols=362 Identities=23% Similarity=0.273 Sum_probs=236.9
Q ss_pred EEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCC--CCCeEEEcCCCEEeeCccccccCCCccccC-CCCcchHHHHH
Q psy10113 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVP--GGVRVIDAAGSYVIPGGIDPHTHFELELMG-ATSVDDFYHGT 97 (596)
Q Consensus 21 llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~--~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~-~~~~d~~~~g~ 97 (596)
++|+|++|++++....++|+|+||+|++|++....+ .+.++||++|++|||||||+|+|+...... .....+...+.
T Consensus 2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~v~~~~~~~~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~~~~~~~~~~~~ 81 (387)
T cd01308 2 TLIKNAEVYAPEYLGKKDILIAGGKILAIEDQLNLPGYENVTVVDLHGKILVPGFIDQHVHIIGGGGEGGPSTRTPEVTL 81 (387)
T ss_pred EEEECcEEeCCCCccceEEEEECCEEEEEeCCcccccCCCCeEEECCCCEEccCeeehhhCcccccCCCcccccCHHHHH
Confidence 579999999987777899999999999999865432 367899999999999999999998542111 11123344566
Q ss_pred HHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCC
Q psy10113 98 KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGL 177 (596)
Q Consensus 98 ~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~ 177 (596)
.+++++|+||++|+..+. + ...+.+...+.++.+ .+.|+..|..++.|.
T Consensus 82 ~~~~~~G~tt~~d~~~~~-~---------------------------~~~~~~~~~~~~~~~-~~~Gv~~v~~~~~~~-- 130 (387)
T cd01308 82 SDLTTAGVTTVVGCLGTD-G---------------------------ISRSMEDLLAKARAL-EEEGITCFVYTGSYE-- 130 (387)
T ss_pred HHHHhCCceEEecCcCCC-C---------------------------CCCCHHHHHHHHHHH-HHhCCEEEEEecccC--
Confidence 788999999999985221 1 011112222223332 345888777554332
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEE
Q psy10113 178 YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVV 257 (596)
Q Consensus 178 ~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~ 257 (596)
..++++.+.++.. + ...+.+...|..++..+..++|.+.+.....+.+..++..+++.+++
T Consensus 131 --~~~~~~~~~~~~~----------------~-~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 191 (387)
T cd01308 131 --VPTRTITGSIRKD----------------L-LLIDKVIGVGEIAISDHRSSQPTVEELARIAAEARVGGLLGGKAGIV 191 (387)
T ss_pred --CCCcCchhhHHHH----------------H-HHHHHhcCcceEEEcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 1222232222210 0 01222223345554555667777777777777777666666665444
Q ss_pred e--cC-cHHHHHHHHH-HHHHHhhcCCceeeEEeeccceeecCCCCCCC--c-ccccc----ccccCCCCCCCC--CcHH
Q psy10113 258 H--IM-SKAAGDAMAY-KRKELMKKGKHCTLYGETLAAAVGTHANQIPC--T-WHDQA----AHVLSPPLRPDE--TTPT 324 (596)
Q Consensus 258 h--v~-s~~~~~~i~~-a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~--~-~~~~~----~~~~~Pplr~~~--~~~~ 324 (596)
| .. +..+.+.+.. +++. |+ +++ +++.+++..+...+.. + ...+. .+..+|++++++ ...+
T Consensus 192 ~vh~~~~~~~~~~i~~~~~~~----G~--~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~v~i~~~~~~~~~~~~~~~~~~ 264 (387)
T cd01308 192 HIHLGDGKRALSPIFELIEET----EI--PIT-QFLPTHINRTAPLFEQGVEFAKMGGTIDLTSSIDPQFRKEGEVRPSE 264 (387)
T ss_pred EEEeCCchHHHHHHHHHHHhc----CC--Ccc-eeECCcccCCHHHHHHHHHHHHcCCcEEEECCCCccccccCccChHH
Confidence 4 43 3355566644 4444 77 777 9999998876653211 1 11111 244667777543 3468
Q ss_pred HHHHHHhcCC---ccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHc
Q psy10113 325 HLLTLLNENA---LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIF 401 (596)
Q Consensus 325 ~l~~~l~~G~---~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~l 401 (596)
.++.++.+|. .++++||++.........| .+ .+.|.++++..+..+. .++..++++++++++++|.|||++|
T Consensus 265 ~l~~~~~~g~~~d~i~l~TD~~~~~p~~~~~g--~~--~~~g~~~~~~~~~~~~-~~v~~~~i~~~~al~~~T~npA~~l 339 (387)
T cd01308 265 ALKRLLEQGVPLERITFSSDGNGSLPKFDENG--NL--VGLGVGSVDTLLREVR-EAVKCGDIPLEVALRVITSNVARIL 339 (387)
T ss_pred HHHHHHHhCCCCCcEEEEECCCCCcccCccCC--eE--EecCcCcHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 8889999985 3599999853211111011 11 2467788887776666 6777788999999999999999999
Q ss_pred CCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceee
Q psy10113 402 NLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRV 470 (596)
Q Consensus 402 gl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~ 470 (596)
|+++ +|+|++|++|||+|||++- .+..|+++|++|++||++..
T Consensus 340 g~~~-~G~i~~G~~ADlvv~d~~~-------------------------~~~~~~~~G~~v~~~~~~~~ 382 (387)
T cd01308 340 KLRK-KGEIQPGFDADLVILDKDL-------------------------DINSVIAKGQIMVRNGKLLV 382 (387)
T ss_pred CCCC-CCCcCCCCcCCEEEEcCCC-------------------------CEEEEEECCEEEEECCeEee
Confidence 9965 8999999999999999861 34789999999999998864
No 49
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=3.9e-32 Score=291.00 Aligned_cols=350 Identities=22% Similarity=0.238 Sum_probs=234.2
Q ss_pred cccEEEEccEEEcC-CCceeeeEEEECCeEEEeccCCCC------------CCCCeEEEcCCCEEeeCccccccCCCccc
Q psy10113 18 QNRLLIKNGKVVNA-DKISDLDIYIENGVIQQLGRNLIV------------PGGVRVIDAAGSYVIPGGIDPHTHFELEL 84 (596)
Q Consensus 18 ~~~llIkng~Iv~~-d~~~~~dV~IedG~I~~Ig~~~~~------------~~~~~vIDa~G~~V~PG~ID~HtHl~~~~ 84 (596)
..+++|+|++|+|+ .....+||+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..|.
T Consensus 67 ~~DlVItNa~IIDp~~Gi~kaDIgIkDGrIaaIG~~~npd~~~gv~p~~~~g~~teVIDaeG~IVtPG~ID~HVH~~~Pg 146 (569)
T PRK13308 67 ALDFVLCNVTVIDPVLGIVKGDIGIRDGRIVGIGKAGNPDIMDGVDPRLVVGPGTDVRPAEGLIATPGAIDVHVHFDSAQ 146 (569)
T ss_pred cCCEEEECeEEEcCCCCeEEeEEEEECCEEEEecCCCCccccccccccccCCCCCeEEECCCCEEEeCEEEeeeCCCCcc
Confidence 45799999999985 456789999999999999974311 13568999999999999999999996542
Q ss_pred cCCCCcchHHHHHHHHHhCCceEEeccccCC---CCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHH
Q psy10113 85 MGATSVDDFYHGTKAAVAGGTTTIIDFALPR---KGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCE 161 (596)
Q Consensus 85 ~~~~~~d~~~~g~~~al~~GtTti~D~~~~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~ 161 (596)
. .++|+++||||++++.... +.......++.+.+.++. ..++|+++.... . +..+++.++++
T Consensus 147 ~-----------~~aALagGVTTVi~gg~gPt~p~~t~g~~~i~~~l~aa~~-~pvN~g~~gkG~--~-s~~aeL~eli~ 211 (569)
T PRK13308 147 L-----------VDHALASGITTMLGGGLGPTVGIDSGGPFNTGRMLQAAEA-WPVNFGFLGRGN--S-SKPAALIEQVE 211 (569)
T ss_pred H-----------HHHHHcCCCcEEecCCcCCCCCCCCCCHHHHHHHHHHHhc-CCccEEEEcCCc--c-cCHHHHHHHHH
Confidence 1 3789999999999863211 111223334444444442 468888876532 2 23567888764
Q ss_pred HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHH
Q psy10113 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVT 241 (596)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~ 241 (596)
.|+.+||.+.+| ..+++.+.++++.|+++++++.+|++...... . .|.
T Consensus 212 -aGA~GfKi~ed~----g~t~~~i~~aL~~A~~~dv~VaiHadtlne~g-----------------------~--~E~-- 259 (569)
T PRK13308 212 -AGACGLKIHEDW----GAMPAAIDTCLEVADEYDFQVQLHTDTLNESG-----------------------F--VED-- 259 (569)
T ss_pred -CCCCEEeecCCC----CCCHHHHHHHHHHHHhcCCEEEEeCCCcCcch-----------------------H--HHH--
Confidence 599999988655 35889999999999999999999998743110 0 122
Q ss_pred HHHHHhcccCCCeEEEecCc---HHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCC
Q psy10113 242 RACTIANQVDCPLYVVHIMS---KAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRP 318 (596)
Q Consensus 242 ~~i~la~~~~~p~~i~hv~s---~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~ 318 (596)
.++...+..+|+.|+.+ ..+.+.|+..... .+.|.-+..+.+....+-+.|+.-- -.++-.+|.+..
T Consensus 260 ---t~~a~~gr~iH~~H~egaggghapd~l~~~~~~----n~lp~stnpt~p~t~nt~~e~~dm~---m~~h~l~~~~~~ 329 (569)
T PRK13308 260 ---TLAAIGGRTIHMYHTEGAGGGHAPDIIRVVGEP----HCLPSSTNPTNPYTVNTFDEHLDMT---MVCHHLNPDVPE 329 (569)
T ss_pred ---HHHHhcCCeEEEEeccCCccCchhHHHHHhCCC----CccCCCCCCCCCCccCchhhhcCeE---EEecCCCCCCcc
Confidence 23333489999999986 3556666666444 5555555555555444433333211 112223332221
Q ss_pred C---------CCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhc----cCCCCC
Q psy10113 319 D---------ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGV----VPGILS 385 (596)
Q Consensus 319 ~---------~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v----~~~~l~ 385 (596)
| +++..+---+.+.|+...++||... ++.+.+.+...|+... ..|.++
T Consensus 330 d~afa~srir~~ti~ae~~l~d~g~~s~~~sds~~-------------------mgr~~e~i~r~~q~a~~~~~~~g~l~ 390 (569)
T PRK13308 330 DVAFAESRIRAQTIAAEDVLHDIGAISMLGSDSQG-------------------MGRIAEVIARTWQLASKMKDQRGPLP 390 (569)
T ss_pred hhhhhhhhccceeeccCchhhcCCcEEEEecchHH-------------------HhHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 1 2222221123456899999999742 2233444445554221 245666
Q ss_pred HHH-----------HHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEE
Q psy10113 386 PEK-----------FVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEY 454 (596)
Q Consensus 386 ~~e-----------~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~ 454 (596)
.++ .|+++|.|||+++|++.++|+|++|+.||||+||++. | +. ++..
T Consensus 391 ~~~~~~~dn~rv~r~L~~~T~npA~alGi~~~vGsLe~Gk~ADLVv~d~d~-----------------f-gv----~p~~ 448 (569)
T PRK13308 391 EDRGTFADNARIKRYIAKYTINPAITFGIDDHIGSLEPGKLADIVLWRPAF-----------------F-GI----KPEL 448 (569)
T ss_pred cccccCCchhhhhHHHHHHhHHHHHHcCCCCCceeeCCCCcCCEEEECCcc-----------------c-CC----CeeE
Confidence 665 7999999999999998889999999999999999761 1 11 4679
Q ss_pred EEECCEEEEEC
Q psy10113 455 VIVGGRVCVDE 465 (596)
Q Consensus 455 Vi~~GrvV~~d 465 (596)
||++|+++|..
T Consensus 449 ti~~G~iv~~~ 459 (569)
T PRK13308 449 VIKGGFPAWAA 459 (569)
T ss_pred EEECCEEEEec
Confidence 99999999864
No 50
>PRK05451 dihydroorotase; Provisional
Probab=100.00 E-value=1.5e-32 Score=287.57 Aligned_cols=325 Identities=16% Similarity=0.100 Sum_probs=244.0
Q ss_pred EEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccC--ceeeeeccccc
Q psy10113 68 YVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEK--VCCDYALHVGI 145 (596)
Q Consensus 68 ~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~ 145 (596)
+-+|=-||+|+|+... ...+++.++++ .++|+++|+....+..+..+.++.+...+... ..+++.++..+
T Consensus 5 ~~~~~~~d~h~hl~~~----~~~~~~~~~~~----~~~t~~v~mPnt~P~~~~~~~l~~~~~~a~~~~~~~~d~~~~~~i 76 (345)
T PRK05451 5 LTIRRPDDWHLHLRDG----AMLKAVVPYTA----RQFGRAIVMPNLVPPVTTVAQALAYRERILAALPAGSNFEPLMTL 76 (345)
T ss_pred EEecCcceEEEecCCc----hHHHHHHHHHH----HhcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCCcEEEEEEE
Confidence 5678889999999742 33347777766 34888888875555555566677776666544 23567766666
Q ss_pred cCCChhHHHHHHHHHHHcC-CCEEEEEeecCCC----ccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcC
Q psy10113 146 TWWSDQVQQEMAELCEKHG-VNSFKTFMAYKGL----YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAG 220 (596)
Q Consensus 146 ~~~~~~~~~e~~~lv~~~G-v~~~k~~~~~~~~----~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~G 220 (596)
........++++++. +.| +.+||+|+++... ...+++.++++++.|.++|+++.+|+|+.+......
T Consensus 77 ~~~~~~~~~El~~~~-~~Gvv~g~Kl~~~~~~~~~~~~~~dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~------- 148 (345)
T PRK05451 77 YLTDNTDPDELERAK-ASGVVTAAKLYPAGATTNSDAGVTDIEKIYPVLEAMQKLGMPLLVHGEVTDPDIDIF------- 148 (345)
T ss_pred EeCCCCCHHHHHHHH-HCCCEEEEEEecccCccCCccCcCCHHHHHHHHHHHHHcCCEEEEecCCCCcccccc-------
Confidence 544334467888885 569 5699999875321 113788999999999999999999999854311000
Q ss_pred CCCCCcccCCChHHHHHHHHHHH-HHHhccc-CCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCC
Q psy10113 221 IKGPEGHQLSRPEEVEAEAVTRA-CTIANQV-DCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHAN 298 (596)
Q Consensus 221 i~~~~~~~~~~p~~~e~~a~~~~-i~la~~~-~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~ 298 (596)
.. +..++.+. ..+|... ++++|++|+++.++.+.++++ +. .|++|+|++||.++..
T Consensus 149 ---------~~----e~~~~~~~l~~lA~~~pg~~lhI~Hlst~~~~e~i~~a-------~~--~it~Et~ph~L~l~~~ 206 (345)
T PRK05451 149 ---------DR----EAVFIDRVLEPLRRRFPKLKIVFEHITTKDAVDYVREA-------ND--NLAATITPHHLLINRN 206 (345)
T ss_pred ---------cc----hHHHHHHHHHHHHHhcCCCcEEEEecCcHHHHHHHHhc-------CC--CEEEEecHHHHhcCHH
Confidence 00 23344444 4477666 999999999999999998765 56 8999999999999987
Q ss_pred CCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCcc-EEeCCCCCCChhhhhhCCCCCCcCCCCCcchHH---HHHHH
Q psy10113 299 QIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQ-TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQD---RLSVI 374 (596)
Q Consensus 299 ~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~-~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~---~~~~~ 374 (596)
++... .....++++||||. .+++++||+.|+.|.+. +++|||||++..+|. .|+|.+|++. .++.+
T Consensus 207 ~~~~~-~~~~~~k~~PPLR~-~~d~~aLw~~l~~G~Id~~i~SDHaP~~~~~K~--------~~~G~~gi~~~~~g~~~~ 276 (345)
T PRK05451 207 DMLVG-GIRPHLYCLPILKR-ETHRQALREAATSGNPKFFLGTDSAPHARHAKE--------SACGCAGIFSAPAALELY 276 (345)
T ss_pred HHhCC-CcCCCeEEeCCCCC-HHHHHHHHHHHHcCCCCEEEeCCCCCCChHHhC--------CCCCCCchhhHHHHHHHH
Confidence 76421 12345789999998 68999999999999999 899999999988773 3567777777 44655
Q ss_pred HHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcc-cCeEeeeeE
Q psy10113 375 WEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIF-EGLVCHGVP 452 (596)
Q Consensus 375 ~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~-~g~~~~g~~ 452 (596)
+..+ ..++ +++++++++|+||||+||++++||+|.+| +..++++.+.+++...|+|| +|-++.|+|
T Consensus 277 ~~~~-~~~~-~l~~~v~~~s~nPAkifGl~~~KG~i~~~----------~~~~~v~~~~~~s~~~~sp~~~~~~~~~~~ 343 (345)
T PRK05451 277 AEVF-EEAG-ALDKLEAFASLNGPDFYGLPRNTDTITLV----------REPWTVPESIPFGDETVVPFRAGETLRWSV 343 (345)
T ss_pred HHHH-HcCC-CHHHHHHHHhHHHHHHhCCCCCCCeEEEE----------ecceecCcccccCCCceeeecCCceeeeEe
Confidence 6543 3333 99999999999999999999999999887 57899999999999999999 666776665
No 51
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.9e-31 Score=292.62 Aligned_cols=375 Identities=19% Similarity=0.200 Sum_probs=225.8
Q ss_pred ccEEEEccEEEcCCC-----ceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCcc--------c-
Q psy10113 19 NRLLIKNGKVVNADK-----ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELE--------L- 84 (596)
Q Consensus 19 ~~llIkng~Iv~~d~-----~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~--------~- 84 (596)
|++||+|+.|++.+. ..+++|+|+||+|++||+.... .+.++||+.|++|||||||+|+|+.+. .
T Consensus 1 ~~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~~-~~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~~~~~~~ 79 (488)
T PRK06151 1 MRTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFDG-EVDRVIDAGNALVGPGFIDLDALSDLDTTILGLDNGP 79 (488)
T ss_pred CeEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCCC-CCCeEEeCCCCEEecCEEeeecccchhhhhcccccch
Confidence 478999999975332 2468999999999999985432 246899999999999999999996421 0
Q ss_pred ---cC--------------CCCcchHHH----HHHHHHhCCceEEeccccC---CCCc---cHHHHHHHHHHHhccCcee
Q psy10113 85 ---MG--------------ATSVDDFYH----GTKAAVAGGTTTIIDFALP---RKGE---SLIKTYESWRQKADEKVCC 137 (596)
Q Consensus 85 ---~~--------------~~~~d~~~~----g~~~al~~GtTti~D~~~~---~~~~---~~~~a~~~~~~~~~~~~~~ 137 (596)
.+ ..+.++.+. ++..+|+.||||++|+... .... .+...++...+.. .+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~G-iR~~~ 158 (488)
T PRK06151 80 GWAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRLG-LRVYL 158 (488)
T ss_pred hHHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHcC-CeEEe
Confidence 00 123444443 4556789999999987421 1111 1222222222221 11111
Q ss_pred eeecccc----------cc-CC---ChhHHHHHHHHHHH---cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEE
Q psy10113 138 DYALHVG----------IT-WW---SDQVQQEMAELCEK---HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAM 200 (596)
Q Consensus 138 ~~~~~~~----------~~-~~---~~~~~~e~~~lv~~---~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~ 200 (596)
-+.+... .. .. ..+..++..++++. .|...++..++++..+.+++++|.++++.|+++|.++.
T Consensus 159 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~v~ 238 (488)
T PRK06151 159 GPAYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRTAAAARELGCPVR 238 (488)
T ss_pred cchhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceEEEEcCCCCCCCCHHHHHHHHHHHHHCCCcEE
Confidence 1111000 00 01 12223444454443 45667888888877778999999999999999999999
Q ss_pred EecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHH--------HHHHHHHH
Q psy10113 201 VHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAA--------GDAMAYKR 272 (596)
Q Consensus 201 vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~--------~~~i~~a~ 272 (596)
+|+.++....+...+ ..|... .+.+ .-....+.++.+.|+..-.. .+.+++++
T Consensus 239 ~H~~e~~~~~~~~~~--~~g~~~-------------~~~~----~~~g~l~~r~~l~H~~~l~~~~~~~~~~~~~~~~la 299 (488)
T PRK06151 239 LHCAQGVLEVETVRR--LHGTTP-------------LEWL----ADVGLLGPRLLIPHATYISGSPRLNYSGGDDLALLA 299 (488)
T ss_pred EEECCchHHHHHHHH--HcCCCH-------------HHHH----HHcCCCCCCcEEEEEEEcCCccccccCCHHHHHHHH
Confidence 999544311111111 112110 0111 11122344566666663222 14555666
Q ss_pred HHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhh
Q psy10113 273 KELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKEL 352 (596)
Q Consensus 273 ~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~ 352 (596)
+. |+ .+.. ++.....-+ .....+..+++.|+.+++|||..+.+...
T Consensus 300 ~~----g~--~v~~--~P~~~~~~g-----------------------~~~~p~~~l~~~Gv~v~lGtD~~~~~~~~--- 345 (488)
T PRK06151 300 EH----GV--SIVH--CPLVSARHG-----------------------SALNSFDRYREAGINLALGTDTFPPDMVM--- 345 (488)
T ss_pred hc----CC--EEEE--Cchhhhhhc-----------------------cccccHHHHHHCCCcEEEECCCCCccHHH---
Confidence 66 77 4321 111100000 01122347899999999999974432111
Q ss_pred CCCCCCcCCCCCcchHHHHHHHHHhhcc--CCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeec
Q psy10113 353 GKDSFTHIPNGVNGVQDRLSVIWEKGVV--PGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTIS 430 (596)
Q Consensus 353 g~~~f~~~p~G~~g~e~~~~~~~~~~v~--~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~ 430 (596)
+.++.....+.+. ...+++.++++++|.|||++||+.+ +|+|++|+.|||||+|.+.....+
T Consensus 346 ---------------~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~-~G~I~~G~~ADlvvld~~~~~~~~ 409 (488)
T PRK06151 346 ---------------NMRVGLILGRVVEGDLDAASAADLFDAATLGGARALGRDD-LGRLAPGAKADIVVFDLDGLHMGP 409 (488)
T ss_pred ---------------HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhCCCC-CcccCCCCcCCEEEEeCCccccCC
Confidence 2223333333222 2348999999999999999999954 799999999999999987432221
Q ss_pred CCCccCCCCCCcccCeEeee---eEEEEEECCEEEEECCceeecC
Q psy10113 431 AKTHAHACDYNIFEGLVCHG---VPEYVIVGGRVCVDEGNLRVAQ 472 (596)
Q Consensus 431 ~~~~~~~~~~~~~~g~~~~g---~~~~Vi~~GrvV~~dG~~~~~~ 472 (596)
.++|+..+.+.+ .|..||++|++||+||++...+
T Consensus 410 --------~~d~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d 446 (488)
T PRK06151 410 --------VFDPIRTLVTGGSGRDVRAVFVDGRVVMEDGRLPGVD 446 (488)
T ss_pred --------ccCHHHHHHhhCCCCCccEEEECCEEEEECCeecCCC
Confidence 235565554443 6899999999999999987544
No 52
>PRK13985 ureB urease subunit beta; Provisional
Probab=100.00 E-value=2e-32 Score=292.01 Aligned_cols=350 Identities=20% Similarity=0.248 Sum_probs=232.7
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCC------------CCCCeEEEcCCCEEeeCccccccCCCcccc
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIV------------PGGVRVIDAAGSYVIPGGIDPHTHFELELM 85 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~------------~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~ 85 (596)
..+++|+|++|+|......+||+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..|.
T Consensus 64 ~~DlVI~Na~IiD~~gi~kaDI~IkdGrIaaIG~~gn~~~~~~v~~~~~ig~~tevIDa~G~iV~PG~ID~HvH~~~P~- 142 (568)
T PRK13985 64 ELDLIITNALIIDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQ- 142 (568)
T ss_pred cCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEECCCCEEEeCEEEeeCCCCCcc-
Confidence 46899999999997667789999999999999974221 23679999999999999999999996542
Q ss_pred CCCCcchHHHHHHHHHhCCceEEeccccCC-----C--CccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHH
Q psy10113 86 GATSVDDFYHGTKAAVAGGTTTIIDFALPR-----K--GESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAE 158 (596)
Q Consensus 86 ~~~~~d~~~~g~~~al~~GtTti~D~~~~~-----~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 158 (596)
.+ ..|+++||||++++.... + .......++...+.++. ..++++++... +. +..+++++
T Consensus 143 ------~~----~~AlagGVTTvI~~G~gP~~~T~p~~~tpg~~~i~~ml~~a~~-~pvn~gf~gkG--~~-~~l~eL~e 208 (568)
T PRK13985 143 ------QI----PTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEE-YSMNLGFLGKG--NS-SNDASLAD 208 (568)
T ss_pred ------HH----HHHhcCceEEEEccCcCCCCCCCCcCCCCcHHHHHHHHHHhhc-cCccEEEecCC--cc-CCHHHHHH
Confidence 12 458999999999852211 1 01112223333344443 34788887643 22 33567777
Q ss_pred HHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHH
Q psy10113 159 LCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAE 238 (596)
Q Consensus 159 lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~ 238 (596)
+++ .|+.+||.+..| ..++..+.++++.|++++.++.+|+++..... -+ |
T Consensus 209 l~~-aGA~GfK~~ed~----g~t~~~I~~aL~vA~~~dv~V~iHtdtlne~g-----------------------~~--E 258 (568)
T PRK13985 209 QIE-AGAIGFKIHEDW----GTTPSAINHALDVADKYDVQVAIHTDTLNEAG-----------------------CV--E 258 (568)
T ss_pred HHH-cCCEEEEECCcc----CCCHHHHHHHHHHHHHcCCEEEEeCCCCCCch-----------------------hh--H
Confidence 764 599999976544 36889999999999999999999998743110 01 1
Q ss_pred HHHHHHHHhcccCCCeEEEecCc---HHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCC
Q psy10113 239 AVTRACTIANQVDCPLYVVHIMS---KAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPP 315 (596)
Q Consensus 239 a~~~~i~la~~~~~p~~i~hv~s---~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pp 315 (596)
. .++...+.++|+.|+.+ ..+.++|+-+... .+.|.-+..+.+....+-+.|+.-- -.++-.+|.
T Consensus 259 ~-----t~aa~~gr~iH~~H~egaggghapdi~~~~~~~----nvlp~stnpt~p~t~nt~~e~~dm~---m~~h~l~~~ 326 (568)
T PRK13985 259 D-----TMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEH----NILPASTNPTIPFTVNTEAEHMDML---MVCHHLDKS 326 (568)
T ss_pred H-----HHHHhcCCeEEEEeccCCCccchhhHHHHcCCC----CcccCCCCCCCCCccCchhhhcCeE---EeecCCCCC
Confidence 1 34445699999999985 4567777776544 5555445555555544444433311 112223332
Q ss_pred CCCC---------CCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHH---hhc----
Q psy10113 316 LRPD---------ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWE---KGV---- 379 (596)
Q Consensus 316 lr~~---------~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~---~~v---- 379 (596)
+..| +++..+---+.+.|....++||...... +.+....+|+ ++.
T Consensus 327 ~~ed~afa~srir~~tiaaed~l~d~G~~s~~~SDs~~mgr-------------------~ge~~~r~~q~a~k~~~~~g 387 (568)
T PRK13985 327 IKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGR-------------------VGEVITRTWQTADKNKKEFG 387 (568)
T ss_pred CcchhhhhhhhccccccccCchhhhCCcEEEEeccchhhCc-------------------ccceeeehHHHHHHHHHhcC
Confidence 2211 2222221124457999999999752110 0011111111 111
Q ss_pred -------cCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeE
Q psy10113 380 -------VPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVP 452 (596)
Q Consensus 380 -------~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~ 452 (596)
....++.+++|++.|.|||+++|+++++|+|++||.|||||||++. |. -.|
T Consensus 388 ~l~~~~~~~dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~ADlVv~d~d~-----------------f~-----~~p 445 (568)
T PRK13985 388 RLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAF-----------------FG-----VKP 445 (568)
T ss_pred CCCCccccccccCHHHHHHHHhHHHHHHcCcccCceeECCCCccCEEEEcCcc-----------------CC-----CCh
Confidence 2356778899999999999999999999999999999999999872 21 146
Q ss_pred EEEEECCEEEEEC
Q psy10113 453 EYVIVGGRVCVDE 465 (596)
Q Consensus 453 ~~Vi~~GrvV~~d 465 (596)
..||++|+++|..
T Consensus 446 e~vi~~G~iv~~~ 458 (568)
T PRK13985 446 NMIIKGGFIALSQ 458 (568)
T ss_pred heEEECCEEEEcc
Confidence 7999999999975
No 53
>PRK08204 hypothetical protein; Provisional
Probab=100.00 E-value=5.1e-31 Score=287.29 Aligned_cols=371 Identities=20% Similarity=0.242 Sum_probs=224.4
Q ss_pred ccEEEEccEEEcCCC----ceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCcccc---------
Q psy10113 19 NRLLIKNGKVVNADK----ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM--------- 85 (596)
Q Consensus 19 ~~llIkng~Iv~~d~----~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~--------- 85 (596)
.+++|+|++|++.+. ..+++|+|+||+|++|++....+ +.++||+.|++|||||||+|+|+...+.
T Consensus 2 ~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~~~-~~~viD~~g~~v~PGlId~H~H~~~~~~~~~~~~~~~ 80 (449)
T PRK08204 2 KRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIEAP-DAEVVDARGMIVMPGLVDTHRHTWQSVLRGIGADWTL 80 (449)
T ss_pred CcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCCCC-CCeEEeCCCCEEecCEEeeeeccchhhhccccCCCcH
Confidence 468899999997543 34789999999999999865433 6689999999999999999999853221
Q ss_pred ------------CCCCcchHH----HHHHHHHhCCceEEeccccCCCC-ccHHHHHHHHHHHhccCceeeeeccccccCC
Q psy10113 86 ------------GATSVDDFY----HGTKAAVAGGTTTIIDFALPRKG-ESLIKTYESWRQKADEKVCCDYALHVGITWW 148 (596)
Q Consensus 86 ------------~~~~~d~~~----~g~~~al~~GtTti~D~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (596)
...+.++.+ .+...+|++||||++|+...... ......++...+... +....++.......|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~G~-r~~~~~~~~~~~~~~ 159 (449)
T PRK08204 81 QTYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSHINNSPEHADAAIRGLAEAGI-RAVFAHGSPGPSPYW 159 (449)
T ss_pred HHHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecccccCChhHHHHHHHHHHHcCC-eEEEEccccCCCCCC
Confidence 112222222 34457899999999997543211 122222332222211 111111111111122
Q ss_pred C----hhHHHHHHHHHHH--cCCC-EEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCC
Q psy10113 149 S----DQVQQEMAELCEK--HGVN-SFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGI 221 (596)
Q Consensus 149 ~----~~~~~e~~~lv~~--~Gv~-~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi 221 (596)
. ....++++.+.++ .+.+ .+...+..++...++++++.++++.|+++|.++.+|+.++... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~---------~-- 228 (449)
T PRK08204 160 PFDSVPHPREDIRRVKKRYFSSDDGLLTLGLAIRGPEFSSWEVARADFRLARELGLPISMHQGFGPWG---------A-- 228 (449)
T ss_pred CcchhhhhHHHHHHHHHhhccCCCCceEEEEecCCcccCCHHHHHHHHHHHHHcCCcEEEEEcCCCcc---------c--
Confidence 1 1233344444332 1222 2334455555566788999999999999999999998543210 0
Q ss_pred CCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCC
Q psy10113 222 KGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIP 301 (596)
Q Consensus 222 ~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~ 301 (596)
.. ..+... .-....+.+..+.|+..-.. +.++++++. |+ .+. +|+.+..
T Consensus 229 ---------~~-----~~~~~l-~~~g~~~~~~~i~H~~~~~~-~~~~~la~~----g~--~v~--~~P~~~~------- 277 (449)
T PRK08204 229 ---------TP-----RGVEQL-HDAGLLGPDLNLVHGNDLSD-DELKLLADS----GG--SFS--VTPEIEM------- 277 (449)
T ss_pred ---------CC-----CHHHHH-HHCCCCCCCeEEEecCCCCH-HHHHHHHHc----CC--CEE--EChHHHh-------
Confidence 00 011111 11223455667778775432 335555555 76 332 2221100
Q ss_pred CccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhh---
Q psy10113 302 CTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKG--- 378 (596)
Q Consensus 302 ~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~--- 378 (596)
+. + ...+| +..++++|+.+++|||..+.+.... + .+.++....++.
T Consensus 278 --~~-g---~~~~~----------~~~~~~~Gv~v~lGtD~~~~~~~~~-~--------------~~~~~a~~~~~~~~~ 326 (449)
T PRK08204 278 --MM-G---HGYPV----------TGRLLAHGVRPSLGVDVVTSTGGDM-F--------------TQMRFALQAERARDN 326 (449)
T ss_pred --hh-c---CCCCc----------HHHHHhcCCceeeccccCCCCCcCH-H--------------HHHHHHHHHHHhhcc
Confidence 00 0 01123 3378899999999999754322110 0 023333322211
Q ss_pred ----------ccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEe
Q psy10113 379 ----------VVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVC 448 (596)
Q Consensus 379 ----------v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~ 448 (596)
.....+++.++++++|.|+|++||+++++|+|++||.|||||||.+.....+ ..+|++.+.+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~ADlvvld~~~~~~~p--------~~dp~~~lv~ 398 (449)
T PRK08204 327 AVHLREGGMPPPRLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQADLVLIDATDLNLAP--------VHDPVGAVVQ 398 (449)
T ss_pred cccccccccCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCccccC--------CcChhhhhee
Confidence 1235789999999999999999999888999999999999999988553332 1355555543
Q ss_pred e---eeEEEEEECCEEEEECCceeecC
Q psy10113 449 H---GVPEYVIVGGRVCVDEGNLRVAQ 472 (596)
Q Consensus 449 ~---g~~~~Vi~~GrvV~~dG~~~~~~ 472 (596)
. ..|..||++||+|+++|+++...
T Consensus 399 ~~~~~~v~~v~v~G~~v~~~~~~~~~d 425 (449)
T PRK08204 399 SAHPGNVDSVMVAGRAVKRNGKLLGVD 425 (449)
T ss_pred ccCCCCceEEEECCEEEEECCEeccCC
Confidence 3 57999999999999999986643
No 54
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=1.2e-31 Score=289.25 Aligned_cols=364 Identities=21% Similarity=0.224 Sum_probs=236.7
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCC----------CCCCCeEEEcCCCEEeeCccccccCCCccccCC
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLI----------VPGGVRVIDAAGSYVIPGGIDPHTHFELELMGA 87 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~----------~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~ 87 (596)
.++++|+|++|+|......+||+|+||+|++|++... +..+.++||++|++|+|||||+|+|+..|..
T Consensus 66 ~mDlVI~Na~Vvd~~gi~~adI~I~dGrI~~IG~~~~p~~~~~v~~~~~~~~eVIDa~G~iV~PG~ID~HvH~~~P~~-- 143 (568)
T PRK13207 66 AVDTVITNALILDHWGIVKADIGIKDGRIVAIGKAGNPDIQDGVDIIIGPGTEVIAGEGLIVTAGGIDTHIHFICPQQ-- 143 (568)
T ss_pred cCCEEEECeEEECCCCeEEEEEEEECCEEEEEeCCCCccccccccccCCCCCeEEECCCCEEEeCeEECccCCccccH--
Confidence 4789999999999866778999999999999997421 1136789999999999999999999865421
Q ss_pred CCcchHHHHHHHHHhCCceEEeccccCC-CC--c----cHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHH
Q psy10113 88 TSVDDFYHGTKAAVAGGTTTIIDFALPR-KG--E----SLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELC 160 (596)
Q Consensus 88 ~~~d~~~~g~~~al~~GtTti~D~~~~~-~~--~----~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv 160 (596)
.++|+++||||++++.... .+ . .....+....+..+ ...++++++.... .+..+++++++
T Consensus 144 ---------~~aALagGVTTVi~mg~gP~~gt~~~t~tpG~~~l~~~l~~a~-~~pin~g~~g~g~---~~~~~~L~e~i 210 (568)
T PRK13207 144 ---------IEEALASGVTTMIGGGTGPATGTNATTCTPGPWHIHRMLQAAD-AFPMNIGFLGKGN---ASLPEALEEQI 210 (568)
T ss_pred ---------HHHHHcCCCCEEEcCCcCCccCCcccccccchHHHHHHHHHhh-cCCceEEEEcCCC---cccHHHHHHHH
Confidence 5789999999999974221 10 0 01122333333333 3457788775332 23466777776
Q ss_pred HHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHH
Q psy10113 161 EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAV 240 (596)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~ 240 (596)
+ .|+..||++.+| ..+++++.++++.|+++|.++.+|++..... -.+
T Consensus 211 ~-aGA~gfKi~~d~----g~t~~~l~~aL~~A~~~gv~V~iHa~tlne~----------------------------G~~ 257 (568)
T PRK13207 211 E-AGAIGLKLHEDW----GATPAAIDNCLSVADEYDVQVAIHTDTLNES----------------------------GFV 257 (568)
T ss_pred H-cCCCEEeecCCC----CCCHHHHHHHHHHHHHhCCEEEEeCCCcccc----------------------------hHH
Confidence 4 599999988765 2588999999999999999999999763211 001
Q ss_pred HHHHHHhcccCCCeEEEecCc---HHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCC
Q psy10113 241 TRACTIANQVDCPLYVVHIMS---KAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLR 317 (596)
Q Consensus 241 ~~~i~la~~~~~p~~i~hv~s---~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr 317 (596)
+. .++...+..+|+.|..+ ..+.+.|+.+... ++.|.-+..+.+....+-+.|+.-- -.++-.+|.+.
T Consensus 258 e~--t~~a~~g~~iH~~H~egaggghapdii~~~~~~----~v~p~st~pt~p~~~~~~~e~~~m~---m~~h~l~~~~~ 328 (568)
T PRK13207 258 ED--TIAAFKGRTIHTFHTEGAGGGHAPDIIKVAGEP----NVLPSSTNPTRPYTVNTIDEHLDML---MVCHHLDPSIP 328 (568)
T ss_pred HH--HHHhcCCCEEEEEeecCCCcCCchHHHHHhhcC----CCccCCCCCCCCCccCchhhhcCeE---EeecCCCCCCc
Confidence 11 34556789999999773 3566777777776 8877666666666555444443321 11222222221
Q ss_pred CC---------CCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhcc--C-CCCC
Q psy10113 318 PD---------ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVV--P-GILS 385 (596)
Q Consensus 318 ~~---------~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~--~-~~l~ 385 (596)
.| +++..+---+++.|...+++||+..... .|...+. +.+......-..+.. . +..+
T Consensus 329 ~d~~~a~srir~~t~~ae~~l~d~Ga~~~~~SD~p~~~~----~~~~~~r-------~~q~A~~r~~~~G~~~~d~~~~~ 397 (568)
T PRK13207 329 EDVAFAESRIRRETIAAEDILHDLGAISMISSDSQAMGR----VGEVIIR-------TWQTAHKMKVQRGPLPGDSGRND 397 (568)
T ss_pred chhhhhhhhccceeecccchhhhCCCEEEecCCcccccc----cccchhH-------HHHHHHHHHHccCCCCcccccCc
Confidence 11 2333222246788999999999864311 0000000 001100000000000 0 1112
Q ss_pred HHHH---HHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEE
Q psy10113 386 PEKF---VAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVC 462 (596)
Q Consensus 386 ~~e~---v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV 462 (596)
.+++ |+++|.|||+++|+++.+|+|++||.||||+||++. |. ..+..||++|+++
T Consensus 398 n~ri~~~l~~~T~npA~alG~~~~vGsIe~Gk~ADlVvld~d~-----------------f~-----~~~~~ti~~G~iv 455 (568)
T PRK13207 398 NFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWKPAF-----------------FG-----VKPELVLKGGMIA 455 (568)
T ss_pred cchHHHHHHHHhHHHHHHcCCCcCccccCCCCcCCEEEECchh-----------------cC-----CCceEEEECCEEE
Confidence 2233 999999999999998889999999999999999761 11 1467999999999
Q ss_pred EEC-Cceeec
Q psy10113 463 VDE-GNLRVA 471 (596)
Q Consensus 463 ~~d-G~~~~~ 471 (596)
|.. |.....
T Consensus 456 ~~~~gd~~as 465 (568)
T PRK13207 456 WAPMGDPNAS 465 (568)
T ss_pred EecCCCcccc
Confidence 987 766543
No 55
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=100.00 E-value=6.9e-31 Score=285.36 Aligned_cols=373 Identities=20% Similarity=0.241 Sum_probs=225.8
Q ss_pred EEEEccEEEcCCC---c-eeeeEEEECCeEEEeccC--CCC-CCCCeEEEcCCCEEeeCccccccCCCcccc--------
Q psy10113 21 LLIKNGKVVNADK---I-SDLDIYIENGVIQQLGRN--LIV-PGGVRVIDAAGSYVIPGGIDPHTHFELELM-------- 85 (596)
Q Consensus 21 llIkng~Iv~~d~---~-~~~dV~IedG~I~~Ig~~--~~~-~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~-------- 85 (596)
++|+|++|++.+. . .+++|+|+||+|++||+. +.. ..+.++||++|++|+|||||+|+|+.+.+.
T Consensus 2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~~~~~viD~~g~lv~PGfID~H~H~~~~~~rg~~~~~~ 81 (442)
T PRK07203 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKYPDAEFIDAKGKLIMPGLINSHNHIYSGLARGMMANIP 81 (442)
T ss_pred EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhccccCCCeEEeCCCCEEecceeeccccchhhhhcccccccC
Confidence 6899999997432 2 358999999999999963 221 135689999999999999999999854321
Q ss_pred -----------------CCCCcchHHHHH----HHHHhCCceEEeccccCCC-CccHHHHHHHHHHHhccCceeeeeccc
Q psy10113 86 -----------------GATSVDDFYHGT----KAAVAGGTTTIIDFALPRK-GESLIKTYESWRQKADEKVCCDYALHV 143 (596)
Q Consensus 86 -----------------~~~~~d~~~~g~----~~al~~GtTti~D~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~ 143 (596)
...+.++++.++ ..++++||||++|+..... .....+++.+..+....+...-+.+..
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~d 161 (442)
T PRK07203 82 PPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYIGGSLFTIADAAKKVGLRAMLCYETSD 161 (442)
T ss_pred CCCCHHHHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccccccchHHHHHHHHHHhCCeEEEeccccc
Confidence 112334444433 4568899999999853211 112222322222222112222122110
Q ss_pred -cccCCChhHHHHHHHHHHHc-C--CCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchh-hhHHHHHHHHH
Q psy10113 144 -GITWWSDQVQQEMAELCEKH-G--VNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGE-IIDKNTQKLLA 218 (596)
Q Consensus 144 -~~~~~~~~~~~e~~~lv~~~-G--v~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~-~i~~~~~~l~~ 218 (596)
.......+..++..++++.. + ...+...+++++.+.++++.+.++++.|+++|+++++|..+.. ...... ..
T Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~~e~~~~~---~~ 238 (442)
T PRK07203 162 RDGEKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRGYHIHVAEGIYDVSDSH---KK 238 (442)
T ss_pred CCcchhHHHHHHHHHHHHHHhcCCCCCceEEEEccCCCcCcCHHHHHHHHHHHHHcCCcEEEEecCChHHHHHHH---HH
Confidence 00011122233444444332 2 1246777888888899999999999999999999999975432 211111 12
Q ss_pred cCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCcee-eEEeeccceeecCC
Q psy10113 219 AGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCT-LYGETLAAAVGTHA 297 (596)
Q Consensus 219 ~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~-v~~e~~~~~l~~~~ 297 (596)
.|.+ |- +. +.-....+-++.+.|+..-.. +.++..++. |. . +++......+.
T Consensus 239 ~g~~---------~v----~~----l~~~Gll~~~~~~~H~~~~~~-~d~~~la~~----g~--~v~~~P~sn~~l~--- 291 (442)
T PRK07203 239 YGKD---------IV----ER----LADFGLLGEKTLAAHCIYLSD-EEIDLLKET----DT--FVVHNPESNMGNA--- 291 (442)
T ss_pred cCCC---------HH----HH----HHhCCCCCCCcEEEEeecCCH-HHHHHHHhc----CC--eEEECchhhhhcc---
Confidence 2221 11 11 112233455666777764332 223444444 76 3 22332211110
Q ss_pred CCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHh
Q psy10113 298 NQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEK 377 (596)
Q Consensus 298 ~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~ 377 (596)
...+| +.++++.|+.+++|||....+. |. ++++..++++
T Consensus 292 -------------~g~~p----------~~~~~~~Gv~v~lGtD~~~~d~---------~~---------~~~~a~~~~~ 330 (442)
T PRK07203 292 -------------VGYNP----------VLEMIKNGILLGLGTDGYTSDM---------FE---------SYKVANFKHK 330 (442)
T ss_pred -------------cCCCC----------HHHHHHCCCeEEEcCCCCCccH---------HH---------HHHHHHHHhc
Confidence 01123 3479999999999999743211 11 5566655555
Q ss_pred hccC-CCCCHHHHHHHHhHhHHHHcC--CCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEe---eee
Q psy10113 378 GVVP-GILSPEKFVAVTSTNAAKIFN--LYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVC---HGV 451 (596)
Q Consensus 378 ~v~~-~~l~~~e~v~~~T~n~Ak~lg--l~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~---~g~ 451 (596)
.... ...+..++++++|.|||+++| +.++.|+|++|+.||||++|.+.+..++. .+|+..+.+ ...
T Consensus 331 ~~~~~~~~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~v~~~~~~~ 402 (442)
T PRK07203 331 HAGGDPNVGWPESPAMLFENNNKIAERYFGAKFGILEEGAKADLIIVDYNPPTPLNE--------DNINGHILFGMNGGS 402 (442)
T ss_pred cccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccCEEEEcCCCCeecCc--------cccccceEeecCCCc
Confidence 3211 123478999999999999999 45678999999999999999886543321 344444443 347
Q ss_pred EEEEEECCEEEEECCceeecC
Q psy10113 452 PEYVIVGGRVCVDEGNLRVAQ 472 (596)
Q Consensus 452 ~~~Vi~~GrvV~~dG~~~~~~ 472 (596)
|..||++||+|++||+++..+
T Consensus 403 v~~v~v~G~~v~~~g~~~~~d 423 (442)
T PRK07203 403 VDTTIVNGKVVMEDRKFLNFD 423 (442)
T ss_pred eEEEEECCEEEEECCcccccC
Confidence 899999999999999986543
No 56
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.1e-30 Score=282.30 Aligned_cols=372 Identities=23% Similarity=0.257 Sum_probs=224.4
Q ss_pred ccEEEEccEEEcCCCc--eeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCcccc-----------
Q psy10113 19 NRLLIKNGKVVNADKI--SDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM----------- 85 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~--~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~----------- 85 (596)
|+++|+|++|++++.. ..++|+|+||+|++|++....+ +.++||+.|++|+|||||+|+|+.....
T Consensus 1 ~~~~i~~~~i~~~~~~~~~~~~i~i~~g~I~~v~~~~~~~-~~~~id~~~~~v~Pg~vd~H~H~~~~~~rg~~~~~~l~~ 79 (424)
T PRK08393 1 MSILIKNGYVIYGENLKVIRADVLIEGNKIVEVKRNINKP-ADTVIDASGSVVSPGFINAHTHSPMVLLRGLADDVPLME 79 (424)
T ss_pred CeEEEECcEEEeCCCCceecceEEEECCEEEEecCCCCCC-CCeEEeCCCCEEccCeeeeccCcchHhhhhccCCCCHHH
Confidence 4689999999998663 4689999999999999865444 4679999999999999999999854211
Q ss_pred ----------CCCCcchHHH----HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc-cccCCCh
Q psy10113 86 ----------GATSVDDFYH----GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV-GITWWSD 150 (596)
Q Consensus 86 ----------~~~~~d~~~~----g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 150 (596)
...+.++++. +...++++||||+.|+... .....+. ......+....++... ..+....
T Consensus 80 ~l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~-----~~~~~~a-~~~~G~r~~~~~~~~~~~~~~~~~ 153 (424)
T PRK08393 80 WLQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMYFH-----MEEVAKA-TLEVGLRGYLSYGMVDLGDEEKRE 153 (424)
T ss_pred HHHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEeccccC-----HHHHHHH-HHHhCCeEEEeceEecCCCccchH
Confidence 1123345543 4456789999999998531 1122222 2222222333332211 1111112
Q ss_pred hHHHHHHHHHHH---cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCch-hhhHHHHHHHHHcCCCCCCc
Q psy10113 151 QVQQEMAELCEK---HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENG-EIIDKNTQKLLAAGIKGPEG 226 (596)
Q Consensus 151 ~~~~e~~~lv~~---~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~-~~i~~~~~~l~~~Gi~~~~~ 226 (596)
+..++..++++. .+...+...++++..+.+++++|.++++.|+++|+++++|+.+. +.+....+ ..|.+
T Consensus 154 ~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~---~~g~~---- 226 (424)
T PRK08393 154 KEIKETEKLMEFIEKLNSPRVHFVFGPHAPYTCSLALLKWVREKAREWNKLITIHLSETMDEIKQIRE---KYGKS---- 226 (424)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HhCcC----
Confidence 222333333321 22233455567777778999999999999999999999998543 22111111 11211
Q ss_pred ccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCcccc
Q psy10113 227 HQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHD 306 (596)
Q Consensus 227 ~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~ 306 (596)
|. +.+......+-++.+.|+..-. .+.++.+++. |+ .+. .|+.. ... .
T Consensus 227 -----~~--------~~l~~~G~l~~~~~~~H~~~l~-~~~l~~la~~----g~--~v~--~~P~s------n~~----l 274 (424)
T PRK08393 227 -----PV--------VLLDEIGFLNEDVIAAHGVWLS-SRDIRILASA----GV--TVA--HNPAS------NMK----L 274 (424)
T ss_pred -----HH--------HHHHHcCCCCCCcEEEEeecCC-HHHHHHHHhc----CC--EEE--ECHHH------HHh----h
Confidence 11 1111223344555566665322 2334555555 76 332 22211 000 0
Q ss_pred ccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhc--cCCCC
Q psy10113 307 QAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGV--VPGIL 384 (596)
Q Consensus 307 ~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v--~~~~l 384 (596)
. ...+| +.++++.|+.+++|||....+.....+ -+.++..++.+.. ....+
T Consensus 275 g---~g~~~----------~~~~~~~Gv~v~lGtD~~~~~~~~d~~--------------~~~~~a~~~~~~~~~~~~~~ 327 (424)
T PRK08393 275 G---SGVMP----------LRKLLNAGVNVALGTDGAASNNNLDML--------------REMKLAALLHKVHNLDPTIA 327 (424)
T ss_pred c---cCCCC----------HHHHHHCCCcEEEecCCCccCCchhHH--------------HHHHHHHHHHhhccCCCCcC
Confidence 0 01122 337889999999999975433221111 1444444444332 22346
Q ss_pred CHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEE
Q psy10113 385 SPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVD 464 (596)
Q Consensus 385 ~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~ 464 (596)
++.++++++|.|||++||+. .|+|++|+.||||++|.+.+...+..+......+.++ .+.|..||++|++||+
T Consensus 328 ~~~~al~~aT~~~A~~lg~~--~G~l~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~v~G~~v~~ 400 (424)
T PRK08393 328 DAETVFRMATQNGAKALGLK--AGVIKEGYLADIAVIDFNRPHLRPINNPISHLVYSAN-----GNDVETTIVDGKIVML 400 (424)
T ss_pred CHHHHHHHHHHHHHHHhCCC--CCccCCCCccCEEEEeCCCCCcCCCCChHHHeeeeCC-----CCCeeEEEECCEEEEE
Confidence 88999999999999999994 6999999999999999987666554332222222221 2479999999999999
Q ss_pred CCceee
Q psy10113 465 EGNLRV 470 (596)
Q Consensus 465 dG~~~~ 470 (596)
||+++.
T Consensus 401 ~g~~~~ 406 (424)
T PRK08393 401 DGEVLT 406 (424)
T ss_pred CCeECC
Confidence 998754
No 57
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=100.00 E-value=2.7e-30 Score=273.31 Aligned_cols=360 Identities=20% Similarity=0.184 Sum_probs=225.1
Q ss_pred EEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCC----CCCeEEEcCCCEEeeCccccccCCCcccc-CCCCcchHHH
Q psy10113 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVP----GGVRVIDAAGSYVIPGGIDPHTHFELELM-GATSVDDFYH 95 (596)
Q Consensus 21 llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~----~~~~vIDa~G~~V~PG~ID~HtHl~~~~~-~~~~~d~~~~ 95 (596)
++|+|++|++++.....||+|+||+|++|+++.+.+ ....++|++|++|+|||||.|+|+.+... ..........
T Consensus 2 ~li~n~~v~~~~~~~~~dvlI~~gkI~~Ig~~~~~~~~~~~~~~i~d~~G~~v~PGlID~HvH~~~gg~~~~~~~~~~e~ 81 (389)
T TIGR01975 2 TLLKGAEVYAPEYIGKKDILIANDKIIAIADEIPSTKDFVPNCVVVGLEGMIAVPGFIDQHVHIIGGGGEGGPTTRTPEL 81 (389)
T ss_pred EEEECcEEEcCCcCcceeEEEECCEEEEEcCCccccccCCCCeEEECCCCCEEccCEeehhhccccccccCCCccCCHHH
Confidence 589999999987666789999999999999876543 23335566999999999999999854211 1110122223
Q ss_pred HHHHHHhCCceEEeccccCCCCccHHH-HHHHHHHHhccCceeee--e-ccccccCCChhHHHHHHHHHHHcCCCEEE-E
Q psy10113 96 GTKAAVAGGTTTIIDFALPRKGESLIK-TYESWRQKADEKVCCDY--A-LHVGITWWSDQVQQEMAELCEKHGVNSFK-T 170 (596)
Q Consensus 96 g~~~al~~GtTti~D~~~~~~~~~~~~-a~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k-~ 170 (596)
++..++++||||++|+..........+ .+...+.....+.++.. + ..+..+..+.+...++.. .+ -+-.+| +
T Consensus 82 ~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~Gir~~~~~g~~~~p~~t~t~~~~~d~~~-~d--~iiG~~~i 158 (389)
T TIGR01975 82 TLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEGISCYMLTGAYHVPSRTITGSVESDLLL-ID--KVIGVGEI 158 (389)
T ss_pred HHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhCCEEEEEcccccCCCcccccchhhheee-eh--hhcccceE
Confidence 678889999999999864432222211 22233333333333222 1 223344455555554432 11 334443 6
Q ss_pred EeecCCCccCCHHHHHHHHHHHHhcC----Ce--EEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHH
Q psy10113 171 FMAYKGLYMLSDGELYDAFSAIKNLG----AI--AMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRAC 244 (596)
Q Consensus 171 ~~~~~~~~~~~~~~l~~~~~~a~~~g----~~--~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i 244 (596)
-++.+-....+.++|.++.+.++..| .+ +++|.-++..-.+. ..
T Consensus 159 a~sd~r~~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~~~~l~~------------------------------l~ 208 (389)
T TIGR01975 159 AISDHRSAQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGDSKRALQP------------------------------IY 208 (389)
T ss_pred EEccCcCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCchhhHHH------------------------------HH
Confidence 67777777889999999999999988 77 99998765322222 22
Q ss_pred HHhcccCCCeEEE---ecC-cHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCC
Q psy10113 245 TIANQVDCPLYVV---HIM-SKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDE 320 (596)
Q Consensus 245 ~la~~~~~p~~i~---hv~-s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~ 320 (596)
.+.+..+.|.|.. |+. +..-.+.-.++.++ |....+.....+..+ .+ . ..
T Consensus 209 ~~~~~~di~~~~f~pth~~r~~~l~~~~i~~~~~----gg~iDv~~~~~~~~l-----------~~-------~----~~ 262 (389)
T TIGR01975 209 ELVENTDVPITQFLPTHINRNVPLFEAGLEFAKK----GGTIDLTSSIDPQFR-----------KE-------G----EV 262 (389)
T ss_pred HHHHhcCCChhheecCccCCCHHHHHHHHHHHHh----CCcEEEeCCCCccch-----------hc-------c----cc
Confidence 2334445554432 333 22222222223333 541122211110000 00 0 01
Q ss_pred CcHHHHHHHHhcCCcc---EEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhH
Q psy10113 321 TTPTHLLTLLNENALQ---TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNA 397 (596)
Q Consensus 321 ~~~~~l~~~l~~G~~~---~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~ 397 (596)
...+.+..++++|+.. +++||.......... .-..+..|+.+.+..+. .+..++..++++++++|+++|.||
T Consensus 263 ~~~~~~~~~~~~Gv~~~~i~isSD~~gs~p~~~~----~g~~~~~g~g~~~sl~~-~~~~lv~~g~ls~~eal~~~T~np 337 (389)
T TIGR01975 263 APAEGIKKALEAGVPLEKVTFSSDGNGSQPFFDE----NGELTGLGVGSFETLFE-EVREAVKDGDVPLEKALRVITSNV 337 (389)
T ss_pred ChHHHHHHHHHcCCCcceEEEEeCCCCCCCcccc----ccccccCCcCcHHHHHH-HHHHHHHhCCCCHHHHHHHHHHHH
Confidence 2345677899999864 999998532111111 11234567777765444 444677788899999999999999
Q ss_pred HHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCceee
Q psy10113 398 AKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRV 470 (596)
Q Consensus 398 Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~~ 470 (596)
|++||++ ++|+|++|++|||+|||.+. .+..||++|++++++|++..
T Consensus 338 A~~Lgl~-~~G~I~~G~~ADlvild~~~-------------------------~i~~v~~~G~~v~~~g~~~~ 384 (389)
T TIGR01975 338 AGVLNLT-GKGEISPGNDADLVVLDPDL-------------------------RIHSVIARGKLMVKDGKACV 384 (389)
T ss_pred HHHhCCC-CCCeECCCCcCCEEEEcCCC-------------------------CEEEEEECCEEEEECCEEEe
Confidence 9999996 79999999999999999761 24689999999999999864
No 58
>PRK12393 amidohydrolase; Provisional
Probab=99.98 E-value=7.1e-30 Score=278.05 Aligned_cols=379 Identities=18% Similarity=0.205 Sum_probs=222.1
Q ss_pred ccEEEEccE-EEcCCC----cee-eeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccC------
Q psy10113 19 NRLLIKNGK-VVNADK----ISD-LDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG------ 86 (596)
Q Consensus 19 ~~llIkng~-Iv~~d~----~~~-~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~------ 86 (596)
.+++|+|++ |++.+. ..+ ++|+|+||+|++||+ ....++.++||+.|++|+|||||+|+|+.+.+..
T Consensus 2 ~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~-~~~~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~rg~~~~~ 80 (457)
T PRK12393 2 PSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGA-LTPLPGERVIDATDCVVYPGWVNTHHHLFQSLLKGVPAGI 80 (457)
T ss_pred CcEEEECCeEEEecCCCccccccCceEEEECCEEEEEec-cCCCCCCeEEeCCCCEEecCEeecccCccccccccccccc
Confidence 469999996 676432 233 499999999999998 3333467999999999999999999999653321
Q ss_pred -----------------CCCcchHH----HHHHHHHhCCceEEeccccC---CCCccHHHHHHHHHHHhccCceeeeecc
Q psy10113 87 -----------------ATSVDDFY----HGTKAAVAGGTTTIIDFALP---RKGESLIKTYESWRQKADEKVCCDYALH 142 (596)
Q Consensus 87 -----------------~~~~d~~~----~g~~~al~~GtTti~D~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 142 (596)
..+.++++ .++..+|++||||+.|+... .......++..+.......+.+.-++..
T Consensus 81 ~~~~~~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~ 160 (457)
T PRK12393 81 NQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFVLCRGGA 160 (457)
T ss_pred CCchHHHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhcccccccchHHHHHHHHHHcCCeEEEEcccc
Confidence 12333333 34556789999999998532 1111222222222222222222222211
Q ss_pred -------cccc-CC----ChhHHHHHHHHHHHc-CC---CEEEEEeecCCC-ccCCHHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 143 -------VGIT-WW----SDQVQQEMAELCEKH-GV---NSFKTFMAYKGL-YMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 143 -------~~~~-~~----~~~~~~e~~~lv~~~-Gv---~~~k~~~~~~~~-~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
.... .+ .++..++.+++.+.. +. ...++.++++.. +.++++.+.++++.|+++|+++.+|+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~g~~~~~H~~e 240 (457)
T PRK12393 161 TQTRGDHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLRRVVVAPTTPTFSLPPELLREVARAARGMGLRLHSHLSE 240 (457)
T ss_pred ccccccCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCceEEEEcCCCCCCCcCHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 1110 11 122233344444321 11 124555666665 6789999999999999999999999854
Q ss_pred hhhhHHHHHHHHH-cCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceee
Q psy10113 206 GEIIDKNTQKLLA-AGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTL 284 (596)
Q Consensus 206 ~~~i~~~~~~l~~-~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v 284 (596)
.. . ..+...+ .|. +|. +. +.-....+-++.+.|+..-.. +.++..++. |. .+
T Consensus 241 ~~--~-~~~~~~~~~g~---------~~~----~~----l~~~g~l~~~~~~~H~~~l~~-~d~~~la~~----g~--~v 293 (457)
T PRK12393 241 TV--D-YVDFCREKYGM---------TPV----QF----VAEHDWLGPDVWFAHLVKLDA-EEIALLAQT----GT--GI 293 (457)
T ss_pred CH--H-HHHHHHHHhCC---------CHH----HH----HHHcCCCCCCeEEEEEecCCH-HHHHHHHHc----CC--eE
Confidence 32 1 1111111 121 110 11 111122344566666664332 234555555 76 33
Q ss_pred -EEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCC
Q psy10113 285 -YGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNG 363 (596)
Q Consensus 285 -~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G 363 (596)
++......++ ...+|+ .++++.|+.+++|||....+....++ .
T Consensus 294 ~~~P~sn~~lg----------------~g~~~~----------~~~~~~Gv~v~lGtD~~~~~~~~d~~-----~----- 337 (457)
T PRK12393 294 AHCPQSNGRLG----------------SGIAPA----------LAMEAAGVPVSLGVDGAASNESADML-----S----- 337 (457)
T ss_pred EECchhhhhhc----------------ccCCCH----------HHHHHCCCeEEEecCCcccCCCccHH-----H-----
Confidence 2222111110 011333 37899999999999975433221111 0
Q ss_pred CcchHHHHHHHHHhhc-cCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCc
Q psy10113 364 VNGVQDRLSVIWEKGV-VPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNI 442 (596)
Q Consensus 364 ~~g~e~~~~~~~~~~v-~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~ 442 (596)
++++..+.++.. ....+++.++++++|.|||++||++ ++|+|++|+.|||+|+|.+.+...+.... ..++
T Consensus 338 ----~~~~a~~~~~~~~~~~~~~~~~~l~~~T~~~A~~l~~~-~~G~l~~G~~ADlvv~d~~~~~~~~~~~~----~~~~ 408 (457)
T PRK12393 338 ----EAHAAWLLHRAEGGADATTVEDVVHWGTAGGARVLGLD-AIGTLAVGQAADLAIYDLDDPRFFGLHDP----AIAP 408 (457)
T ss_pred ----HHHHHHHHhhhcCCCCCCCHHHHHHHHhHHHHHHhCCC-CCCCcCCCCcCCEEEEeCCCcccCCCCCc----hhhh
Confidence 333333333211 1235899999999999999999995 48999999999999999987655442111 1223
Q ss_pred ccCeEeeeeEEEEEECCEEEEECCceeec
Q psy10113 443 FEGLVCHGVPEYVIVGGRVCVDEGNLRVA 471 (596)
Q Consensus 443 ~~g~~~~g~~~~Vi~~GrvV~~dG~~~~~ 471 (596)
+... ..+.+..||++|++||++|++...
T Consensus 409 ~~~~-~~~~v~~v~v~G~~v~~~~~~~~~ 436 (457)
T PRK12393 409 VACG-GPAPVKALLVNGRPVVENGAIPGL 436 (457)
T ss_pred hccC-CCCCeeEEEECCEEEEECCccCCC
Confidence 2222 245799999999999999987643
No 59
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=99.98 E-value=7.4e-31 Score=283.71 Aligned_cols=360 Identities=22% Similarity=0.233 Sum_probs=222.5
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCC----------CCCCeEEEcCCCEEeeCccccccCCCccccCC
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIV----------PGGVRVIDAAGSYVIPGGIDPHTHFELELMGA 87 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~----------~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~ 87 (596)
.|+++|+|++|+|......+||+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..|.
T Consensus 65 ~MDlVIkNg~VID~~gi~kaDI~IkDGrIaaIG~~~~p~~~~~v~~~~~~~tEVIDa~GkIV~PGlIDtHvH~~~P~--- 141 (567)
T TIGR01792 65 VLDLVITNALILDWTGIYKADIGIKNGRIVGIGKAGNPDTMDGVDMIVGASTEAISGEGKIVTAGGIDTHVHYISPQ--- 141 (567)
T ss_pred cCcEEEECeEEECCCCeEEEEEEEECCEEEEEcCCCcccccccccccCCCCCeEEECCCCEEEECeEEeecCCCCcc---
Confidence 57899999999997666789999999999999974321 13578999999999999999999985431
Q ss_pred CCcchHHHHHHHHHhCCceEEeccccCC-----CC--ccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHH
Q psy10113 88 TSVDDFYHGTKAAVAGGTTTIIDFALPR-----KG--ESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELC 160 (596)
Q Consensus 88 ~~~d~~~~g~~~al~~GtTti~D~~~~~-----~~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv 160 (596)
.+++|+++|+||+++..... +. ....-.+....+... ...++++++..... +..+++.+++
T Consensus 142 --------~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~aa~-~~~in~g~~g~g~~---~~~~~L~e~i 209 (567)
T TIGR01792 142 --------QVQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQAAD-GLPINFGFTGKGSG---SGPAALIEQI 209 (567)
T ss_pred --------HHHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHHhc-cCCccEEEEeCCcc---chHHHHHHHH
Confidence 26889999999999854311 00 011111122222222 34566777643322 2345666665
Q ss_pred HHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHH
Q psy10113 161 EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAV 240 (596)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~ 240 (596)
+ .|+..||.+.. +.++++.+.++++.|+++|+++.+|+|..... |+ + +..
T Consensus 210 ~-aGa~gfK~h~~----y~~s~e~L~~al~~A~e~gv~V~iH~ET~~E~----------g~-------------v--e~t 259 (567)
T TIGR01792 210 E-AGACGLKVHED----WGATPAAIDNALSVADEYDVQVAVHTDTLNES----------GF-------------V--EDT 259 (567)
T ss_pred H-cCCcEEEeCCC----CCCCHHHHHHHHHHHHHcCCEEEEeCCCcccc----------hH-------------H--HHH
Confidence 4 68888886654 45899999999999999999999999764310 00 0 111
Q ss_pred HHHHHHhcccCCCeEEEecCc---HHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCC
Q psy10113 241 TRACTIANQVDCPLYVVHIMS---KAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLR 317 (596)
Q Consensus 241 ~~~i~la~~~~~p~~i~hv~s---~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr 317 (596)
++..-+.|+|+.|... ..+.++|+.+... .+.|.-+..+.+....+-+.|+.-- -.++-.+|.+-
T Consensus 260 -----~~a~g~rpIh~~H~~G~g~ghapdi~~~~~~~----~~~~~st~pt~p~~~~~~~e~~~m~---~~~h~l~~~~~ 327 (567)
T TIGR01792 260 -----IAAFKGRTIHTYHTEGAGGGHAPDIIVVVGYN----NILPSSTNPTLPYTVNTIDEHLDML---MVCHHLNPKIP 327 (567)
T ss_pred -----HHHHCCCcchhHhhcCCCCCcHHHHHHHcCCC----CcccCCCCCCCCCccCchhhhcCeE---EEeccCCCCCc
Confidence 1222467777777653 5667777766544 5555445555555444433333211 11222333222
Q ss_pred CC---------CCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcch---HHHHHHHHHhhc--cCCC
Q psy10113 318 PD---------ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGV---QDRLSVIWEKGV--VPGI 383 (596)
Q Consensus 318 ~~---------~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~---e~~~~~~~~~~v--~~~~ 383 (596)
.| +++..+---+.+.|+..+++||..+... +-+.+... ...| ....+. ....
T Consensus 328 ~d~~~a~~r~r~~t~~ae~~l~d~G~~~~~~sDs~~mgr------------~~~~~~r~~q~a~k~--~~~~g~~~~~~~ 393 (567)
T TIGR01792 328 EDVAFAESRIRKETIAAEDVLQDMGAISMISSDSQAMGR------------IGEVVTRCWQTADKM--KKQRGPLPGDSP 393 (567)
T ss_pred ccchhhhhhccceeccccchhhhCCcEEEecCCchhhCc------------ccceeechHHHHHHH--HHhcCCCccccc
Confidence 11 2232222234567999999999853210 00000000 0111 000000 0000
Q ss_pred -CCHH---HHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECC
Q psy10113 384 -LSPE---KFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGG 459 (596)
Q Consensus 384 -l~~~---e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~G 459 (596)
-+.+ ..|++.|.|||+++|+++++|+|++||.|||||||++ +|. ..+..||++|
T Consensus 394 ~~~~~rl~r~L~~yT~n~A~a~g~~~~~GsLe~Gk~ADlVv~~~d-----------------~f~-----~~p~~v~~~G 451 (567)
T TIGR01792 394 GNDNNRVKRYVAKYTINPAITHGISDYIGSIEVGKLADLVLWEPA-----------------FFG-----VKPDMVLKGG 451 (567)
T ss_pred CChhhhHHHHHHHHhHHHHHHcCcccCceeeCCCCccCEEEEcCc-----------------ccC-----CChheEEECC
Confidence 0112 2299999999999999999999999999999999987 221 1457999999
Q ss_pred EEEEEC-Cceee
Q psy10113 460 RVCVDE-GNLRV 470 (596)
Q Consensus 460 rvV~~d-G~~~~ 470 (596)
+++|.. |....
T Consensus 452 ~i~~~~~Gd~~a 463 (567)
T TIGR01792 452 LIAWAIMGDPNA 463 (567)
T ss_pred EEEEEeCCCccc
Confidence 999976 65543
No 60
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=99.97 E-value=1.4e-29 Score=274.53 Aligned_cols=375 Identities=19% Similarity=0.216 Sum_probs=226.7
Q ss_pred EEEEccEEEcCCC----ceeeeEEEECCeEEEeccCCCC---CCCCeEEEcCCCEEeeCccccccCCCcccc--------
Q psy10113 21 LLIKNGKVVNADK----ISDLDIYIENGVIQQLGRNLIV---PGGVRVIDAAGSYVIPGGIDPHTHFELELM-------- 85 (596)
Q Consensus 21 llIkng~Iv~~d~----~~~~dV~IedG~I~~Ig~~~~~---~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~-------- 85 (596)
++|+|++|++.+. ..+++|+|+||+|++||+.... ..+.++||+.|++|+|||||+|+|+.+...
T Consensus 1 ~li~~~~i~t~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~~~id~~g~~v~PG~vd~H~H~~~~~~rg~~~d~~ 80 (441)
T TIGR03314 1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKYPEATFIDAKGKLIMPGFINTHNHFYSTFARGMMADIP 80 (441)
T ss_pred CEEECCEEEecCCCCceEeccEEEEECCEEEEEcCchhhcccCCCCeEEeCCCCEEecCeeecccchhhhhhccccccCC
Confidence 4799999996432 2368999999999999975221 135689999999999999999999854211
Q ss_pred -----------------CCCCcchHHHHH----HHHHhCCceEEeccccCCC-CccHHHH-HHHHHHHhccCceeeeecc
Q psy10113 86 -----------------GATSVDDFYHGT----KAAVAGGTTTIIDFALPRK-GESLIKT-YESWRQKADEKVCCDYALH 142 (596)
Q Consensus 86 -----------------~~~~~d~~~~g~----~~al~~GtTti~D~~~~~~-~~~~~~a-~~~~~~~~~~~~~~~~~~~ 142 (596)
...+++++|.++ ..++++||||+.|+..... .....++ .+...+.. .+...-+++.
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~G-iR~~~~~~~~ 159 (441)
T TIGR03314 81 PPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHASPNAITGSLSTIRKAADEAG-LRTMLCYETS 159 (441)
T ss_pred CCCCHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccccccccchHHHHHHHHHHhC-CeEEEeeeee
Confidence 013344554433 3468899999999863221 1111222 22222222 1222223322
Q ss_pred ccc-cCCChhHHHHHHHHHHH-cC--CCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchh-hhHHHHHHHH
Q psy10113 143 VGI-TWWSDQVQQEMAELCEK-HG--VNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGE-IIDKNTQKLL 217 (596)
Q Consensus 143 ~~~-~~~~~~~~~e~~~lv~~-~G--v~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~-~i~~~~~~l~ 217 (596)
... .....+..++..++++. .+ ...++..++++..+.++++.+.++.+.|+++++++++|..+.. .+... ..
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~i~~H~~E~~~e~~~~---~~ 236 (441)
T TIGR03314 160 DRDGGKEMQEGVEENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIYDVEDS---HH 236 (441)
T ss_pred cCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCHHHHHHH---HH
Confidence 110 01111222333333332 22 2246778888988999999999999999999999999975432 11111 11
Q ss_pred HcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCC
Q psy10113 218 AAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHA 297 (596)
Q Consensus 218 ~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~ 297 (596)
..|.+ | .+.+ .-....+-++.+.|+..-.. +.++..++. |.. .+++......+.
T Consensus 237 ~~g~~---------~----~~~l----~~~G~l~~~~~~~H~~~~~~-~d~~~la~~----g~~-v~~cP~sn~~l~--- 290 (441)
T TIGR03314 237 KYGKD---------I----VERL----ADFGLLGSKTLAAHCIYLSD-REIELLNET----DTF-VVHNPESNMGNA--- 290 (441)
T ss_pred HcCCC---------H----HHHH----HHCCCCCCCeEEEEEecCCH-HHHHHHHHc----CCc-EEECHHHHhhhc---
Confidence 12211 1 1111 11233455666667663332 233444444 651 233333322210
Q ss_pred CCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHh
Q psy10113 298 NQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEK 377 (596)
Q Consensus 298 ~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~ 377 (596)
...+|++ ++++.|+.+++|||....+. |. ++++..++++
T Consensus 291 -------------~G~~p~~----------~~~~~Gv~v~LGtD~~~~d~---------~~---------em~~a~~~~~ 329 (441)
T TIGR03314 291 -------------VGYNPVL----------RMFKNGILLGLGTDGYTSDM---------FE---------SLKFANFKHK 329 (441)
T ss_pred -------------cCCCCHH----------HHHHCCCEEEEcCCCCCcCH---------HH---------HHHHHHHHhc
Confidence 0123333 78999999999999754321 11 6677766665
Q ss_pred hccCC-CCCHHHHHHHHhHhHHHHcC--CCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEE
Q psy10113 378 GVVPG-ILSPEKFVAVTSTNAAKIFN--LYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEY 454 (596)
Q Consensus 378 ~v~~~-~l~~~e~v~~~T~n~Ak~lg--l~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~ 454 (596)
..... .....++++++|.|+|++++ +..++|+|++|+.||||+||++.++.++..+..+. ++-+.. .+.|..
T Consensus 330 ~~~~~~~~~~~~~~~~aT~~ga~al~~~l~~~~G~Le~G~~ADlvv~d~~~~~~~~~~~~~~~----lv~~~~-~~~V~~ 404 (441)
T TIGR03314 330 DAGGDLNAAWPESPAMLFENNNEIAERNFGAKFGRLEPGAKADLIIVDYNAPTPLTADNINGH----ILFGMN-GGSVDS 404 (441)
T ss_pred cccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccEEEEcCCCCeeechhhcccc----ceecCC-CCeeEE
Confidence 43221 12357899999999999986 44578999999999999999987766654322222 232222 568999
Q ss_pred EEECCEEEEECCceeec
Q psy10113 455 VIVGGRVCVDEGNLRVA 471 (596)
Q Consensus 455 Vi~~GrvV~~dG~~~~~ 471 (596)
||++|++||+||+++..
T Consensus 405 v~V~G~~v~~~~~~~~~ 421 (441)
T TIGR03314 405 TMVNGKVVMEDREFLHF 421 (441)
T ss_pred EEECCEEEEECCccccc
Confidence 99999999999998654
No 61
>PRK07583 cytosine deaminase-like protein; Validated
Probab=99.97 E-value=6.9e-30 Score=276.82 Aligned_cols=363 Identities=21% Similarity=0.206 Sum_probs=227.6
Q ss_pred ccccEEEEccEEEc------------CCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccc
Q psy10113 17 SQNRLLIKNGKVVN------------ADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELEL 84 (596)
Q Consensus 17 ~~~~llIkng~Iv~------------~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~ 84 (596)
+++.++|+|+++-+ .+....+||.|+||+|++|++....+.+.++||+.|++|+|||||+|+|++..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~~~~~~~id~~g~~v~Pg~id~H~Hld~~~ 88 (438)
T PRK07583 9 ESGRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGAPDELPAVDLKGRMVWPCFVDMHTHLDKGH 88 (438)
T ss_pred CCCcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCCCCCCceecCCCCcccCCcccceeccccce
Confidence 36789999998632 133446899999999999998765444678999999999999999999986642
Q ss_pred cC-----------------------CCCcch----HHHHHHHHHhCCceEEeccccCC-C-CccHH----HHHHHHHHHh
Q psy10113 85 MG-----------------------ATSVDD----FYHGTKAAVAGGTTTIIDFALPR-K-GESLI----KTYESWRQKA 131 (596)
Q Consensus 85 ~~-----------------------~~~~d~----~~~g~~~al~~GtTti~D~~~~~-~-~~~~~----~a~~~~~~~~ 131 (596)
.. ..+.++ +..+++.++++|||+++.++... . ..... ++.+.|+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd~~~~~~~~~~~~i~~~~~~~~~~~ 168 (438)
T PRK07583 89 IWPRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHLDSFAPQAAISWEVFAELREAWAGRI 168 (438)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeeeccCCCCcccHHHHHHHHHHHhhccC
Confidence 11 112355 67788899999999777665421 1 11223 3444454444
Q ss_pred ccCceeeeeccccccCCChhHHHHHHHHHHHc-CCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEec-Cchhhh
Q psy10113 132 DEKVCCDYALHVGITWWSDQVQQEMAELCEKH-GVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHA-ENGEII 209 (596)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~-Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHa-e~~~~i 209 (596)
..++++++.++.....+. +++.+.+.+. |+.+++.++.+ -.+++++++++.|+++|+++.+|+ ++++..
T Consensus 169 ~~~~v~~~p~~~~~~~~~----~eL~~~v~~~~gv~g~~~~~~~-----~~d~~l~~i~~lA~~~G~~v~vH~~E~~~~~ 239 (438)
T PRK07583 169 ALQAVSLVPLDAYLTDAG----ERLADLVAEAGGLLGGVTYMNP-----DLDAQLDRLFRLARERGLDLDLHVDETGDPA 239 (438)
T ss_pred eEEEEEecChhhccCchH----HHHHHHHHHcCCEEeCCCCCCC-----CHHHHHHHHHHHHHHhCCCcEEeECCCCCch
Confidence 445567777766655443 4566665443 55555544432 166889999999999999999999 554422
Q ss_pred HHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHH------HHHHHHHHHHHHhhcCCcee
Q psy10113 210 DKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKA------AGDAMAYKRKELMKKGKHCT 283 (596)
Q Consensus 210 ~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~------~~~~i~~a~~~~~~~G~~~~ 283 (596)
......+ ...+.. .-...++.+.|+..-. ..+.++.+++. |+ .
T Consensus 240 ~~~l~~~-----------------------~~~~~~--~G~~~~v~i~H~~~l~~~~~~~~~~~i~~la~~----gv--~ 288 (438)
T PRK07583 240 SRTLKAV-----------------------AEAALR--NGFEGKVTCGHCCSLAVQPEEQAQATIALVAEA----GI--A 288 (438)
T ss_pred HHHHHHH-----------------------HHHHHH--hCCCCCEEEEeccchhcCCHHHHHHHHHHHHHc----CC--e
Confidence 2111110 011111 1123478888886532 24667777777 87 5
Q ss_pred eEE-eeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCC
Q psy10113 284 LYG-ETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPN 362 (596)
Q Consensus 284 v~~-e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~ 362 (596)
+.. .....++ .+.. ....|+.| ....+.++++.|+.+++|||+..- .|. |.
T Consensus 289 vv~~P~~~~~l--~~~~----------~~~~p~~~----~~~~v~~l~~aGV~valGtD~~~d----------~~~--p~ 340 (438)
T PRK07583 289 IVSLPMCNLYL--QDRQ----------PGRTPRWR----GVTLVHELKAAGIPVAVASDNCRD----------PFY--AY 340 (438)
T ss_pred EEECcchhhhh--cCCC----------cCCCCCCC----CcchHHHHHHCCCeEEEEeCCCCC----------CCC--CC
Confidence 432 2221111 0000 00112222 223566789999999999998531 111 33
Q ss_pred CCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCc
Q psy10113 363 GVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNI 442 (596)
Q Consensus 363 G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~ 442 (596)
|....-..+...... . ...+++.++++++|.|||+++|++. +|+|++|+.|||||||.+....+..
T Consensus 341 g~~~~~~~~~~a~~~-~-~~~~~~~~al~~~T~~~A~~lg~~~-~G~i~~G~~ADlvv~d~~~~~~~~~----------- 406 (438)
T PRK07583 341 GDHDMLEVFREAVRI-L-HLDHPYDDWPAAVTTTPADIMGLPD-LGRIAVGAPADLVLFKARSFSELLS----------- 406 (438)
T ss_pred CCcCHHHHHHHHHHH-H-hcCCcHHHHHHHHhHHHHHHcCCCC-CCCcCCCCCCCEEEEcCCCHHHHHh-----------
Confidence 322222222222211 1 1246889999999999999999965 8999999999999999985433211
Q ss_pred ccCeEeeeeEEEEEECCEEEEECC
Q psy10113 443 FEGLVCHGVPEYVIVGGRVCVDEG 466 (596)
Q Consensus 443 ~~g~~~~g~~~~Vi~~GrvV~~dG 466 (596)
-.+.+..||.+|++|....
T Consensus 407 -----~~~~~~~V~~~G~~v~~~~ 425 (438)
T PRK07583 407 -----RPQSDRIVLRAGKPIDTTL 425 (438)
T ss_pred -----cCCCccEEEECCEEecccC
Confidence 1224578999999887553
No 62
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=99.97 E-value=4.6e-29 Score=269.87 Aligned_cols=371 Identities=19% Similarity=0.266 Sum_probs=225.0
Q ss_pred ccEEEEccEEEcCCC--ceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCcccc-----------
Q psy10113 19 NRLLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM----------- 85 (596)
Q Consensus 19 ~~llIkng~Iv~~d~--~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~----------- 85 (596)
.+++|+|++|++++. ...++|+|+||+|++|++.... .+.++||+.|++|+|||||+|+|+....+
T Consensus 2 ~~~~~~~~~i~~~~~~~~~~~~v~v~~g~I~~i~~~~~~-~~~~~id~~g~~v~PG~vd~H~H~~~~~~~g~~~~~~~~~ 80 (430)
T PRK06038 2 ADIIIKNAYVLTMDAGDLKKGSVVIEDGTITEVSESTPG-DADTVIDAKGSVVMPGLVNTHTHAAMTLFRGYADDLPLAE 80 (430)
T ss_pred CCEEEEccEEEECCCCeeeccEEEEECCEEEEecCCCCC-CCCEEEeCCCCEEecCeeecccCcchhhhhhccCCCCHHH
Confidence 368999999997643 3468999999999999986433 35589999999999999999999954311
Q ss_pred ----------CCCCcchHHH----HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc-cccCCCh
Q psy10113 86 ----------GATSVDDFYH----GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV-GITWWSD 150 (596)
Q Consensus 86 ----------~~~~~d~~~~----g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 150 (596)
...+.++++. +...+++.||||+.|+... .....++++ +. ..+....+++.- .......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~--~~~~~~a~~---~~-GiR~~~~~~~~d~~~~~~~~ 154 (430)
T PRK06038 81 WLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMYFY--MDEVAKAVE---ES-GLRAALSYGMIDLGDDEKGE 154 (430)
T ss_pred HHHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEccccC--HHHHHHHHH---Hh-CCeEEEEchhccCCCccchH
Confidence 1123344443 3456789999999998531 111222222 11 111221111100 0000111
Q ss_pred hHHHHHHHHHHHc-C--CCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcc
Q psy10113 151 QVQQEMAELCEKH-G--VNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGH 227 (596)
Q Consensus 151 ~~~~e~~~lv~~~-G--v~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~ 227 (596)
+..++...+++.. + ...+...++++....+++++|.++++.|+++|+++.+|+.+.......... ..|..
T Consensus 155 ~~l~~~~~~i~~~~~~~~g~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~--~~G~~----- 227 (430)
T PRK06038 155 AELKEGKRFVKEWHGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLETEAELNQMKE--QYGMC----- 227 (430)
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEEeCCcCccCCHHHHHHHHHHHHHcCCcEEEEcCCCHHHHHHHHH--HhCCC-----
Confidence 2233344444332 1 234566677888888999999999999999999999998665322111111 11221
Q ss_pred cCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccc
Q psy10113 228 QLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQ 307 (596)
Q Consensus 228 ~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~ 307 (596)
+ .+. +.-....+.++.+.|+..-... .++..++. |+ .+... +.+. ... .
T Consensus 228 ----~----i~~----l~~~g~l~~r~~~~H~~~l~~~-~~~~la~~----g~--~v~~~--P~~n------~~~----~ 276 (430)
T PRK06038 228 ----S----VNY----LDDIGFLGPDVLAAHCVWLSDG-DIEILRER----GV--NVSHN--PVSN------MKL----A 276 (430)
T ss_pred ----H----HHH----HHHcCCCCCCeEEEEEecCCHH-HHHHHHhc----CC--EEEEC--hHHh------hhh----c
Confidence 1 011 1112234556666776643322 35555555 77 43211 1110 000 0
Q ss_pred cccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhc--cCCCCC
Q psy10113 308 AAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGV--VPGILS 385 (596)
Q Consensus 308 ~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v--~~~~l~ 385 (596)
...+| +.++++.|+.+++|||....+.....+ -++++..+.++.. ....++
T Consensus 277 ---~~~~p----------~~~~~~~Gv~v~lGtD~~~~~~~~d~~--------------~~~~~a~~~~~~~~~~~~~~~ 329 (430)
T PRK06038 277 ---SGIAP----------VPKLLERGVNVSLGTDGCASNNNLDMF--------------EEMKTAALLHKVNTMDPTALP 329 (430)
T ss_pred ---cCCCC----------HHHHHHCCCeEEEeCCCCccCCCcCHH--------------HHHHHHHHHhhhccCCCCcCC
Confidence 01123 347999999999999975432211111 1344444443321 234689
Q ss_pred HHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEee---eeEEEEEECCEEE
Q psy10113 386 PEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCH---GVPEYVIVGGRVC 462 (596)
Q Consensus 386 ~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~---g~~~~Vi~~GrvV 462 (596)
+.++++++|.|+|++||++ .|+|++|+.||||++|.+.+...+. .+|+..+.+. ..+..||++|++|
T Consensus 330 ~~~al~~aT~~gA~~lg~~--~G~l~~G~~ADlvvld~~~~~~~p~--------~~~~~~~v~~~~~~~v~~v~v~G~~v 399 (430)
T PRK06038 330 ARQVLEMATVNGAKALGIN--TGMLKEGYLADIIIVDMNKPHLTPV--------RDVPSHLVYSASGSDVDTTIVDGRIL 399 (430)
T ss_pred HHHHHHHHhHHHHHHhCCC--CCccCCCcccCEEEEeCCCCccCCC--------CChHHheeEeCCCCceeEEEECCEEE
Confidence 9999999999999999994 6999999999999999986543332 2444444333 2689999999999
Q ss_pred EECCceeec
Q psy10113 463 VDEGNLRVA 471 (596)
Q Consensus 463 ~~dG~~~~~ 471 (596)
|++|++...
T Consensus 400 ~~~g~~~~~ 408 (430)
T PRK06038 400 MEDYKVLCM 408 (430)
T ss_pred EECCeECCC
Confidence 999998653
No 63
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=99.97 E-value=1.7e-29 Score=277.78 Aligned_cols=325 Identities=24% Similarity=0.305 Sum_probs=216.3
Q ss_pred cEEEEccEEEcC--CCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHH
Q psy10113 20 RLLIKNGKVVNA--DKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGT 97 (596)
Q Consensus 20 ~llIkng~Iv~~--d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~ 97 (596)
+++|+|++|+|. .....++|+|+||+|++|++.. +.++||++|++|+|||||+|+|+..+.. ++++| .
T Consensus 1 dlli~n~~ivd~~~~~~~~~dI~I~~g~I~~ig~~~----~~~viDa~G~~v~PG~ID~H~Hi~~~~~---~~~~~---~ 70 (552)
T TIGR01178 1 DIVIKNAKIIDVYNGEIIPGDIAIANGHIAGVGKYN----GVKVIDALGEYAVPGFIDAHIHIESSML---TPSEF---A 70 (552)
T ss_pred CEEEEeeEEEeCCCCcEEeeeEEEECCEEEEecCCC----CCeEEECCCCEEEeCeEecccccCCCCC---ChhHH---H
Confidence 579999999974 3345789999999999998642 4689999999999999999999977643 34555 4
Q ss_pred HHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccc--cc----CCChh--HHHHHHHHHHHcCCCEEE
Q psy10113 98 KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVG--IT----WWSDQ--VQQEMAELCEKHGVNSFK 169 (596)
Q Consensus 98 ~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~--~~~e~~~lv~~~Gv~~~k 169 (596)
+.++.+||||++++....+.....+.++.+.+.+. +..+++.+.+. .+ .++.. ..+++++++++.|+.++|
T Consensus 71 ~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~-~~~~d~~~~~~s~vp~~~~e~~g~~~~~~~i~~~~~~~~V~glk 149 (552)
T TIGR01178 71 KLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAK-KTPLNFYFMLPSCVPALQFETSGAVLTAEDIDELMELDEVLGLA 149 (552)
T ss_pred HHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhh-cCCcEEEEECCCCCCCCcccCCCCccCHHHHHHHHcCCCccEEE
Confidence 66899999999987543333345566666666555 45666533222 11 22222 367888888777999999
Q ss_pred EEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcc
Q psy10113 170 TFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQ 249 (596)
Q Consensus 170 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~ 249 (596)
.+|.|.+. ...++++.+.++.+++.|..+.+|++. +..+....+++.|+..- |.....+
T Consensus 150 e~m~~~~v-~~~d~~~l~~i~~a~~~g~~I~gHap~--l~~~eL~~~~~aGi~~d--He~~s~~---------------- 208 (552)
T TIGR01178 150 EVMDYPGV-INADIEMLNKINSARKRNKVIDGHCPG--LSGKLLNKYISAGISND--HESTSIE---------------- 208 (552)
T ss_pred EEecchhh-cCCCHHHHHHHHHHHhCCCEEEecCCC--CCHHHHHHHHHcCCCCC--cCcCCHH----------------
Confidence 99998764 346777777779999999999999984 33455566666666541 1111111
Q ss_pred cCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHH
Q psy10113 250 VDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTL 329 (596)
Q Consensus 250 ~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~ 329 (596)
+. ....+. |+ .+.. ..++.. .+...+..+
T Consensus 209 ----------------ea-~e~~~~----Gm--~~~i--------r~gs~~--------------------~n~~~~~~~ 237 (552)
T TIGR01178 209 ----------------EA-REKLRL----GM--KLMI--------REGSAA--------------------KNLEALHPL 237 (552)
T ss_pred ----------------HH-HHHHHC----CC--EEEE--------eCCccc--------------------cCHHHHHHH
Confidence 11 111222 55 2211 001000 111222222
Q ss_pred H--hcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCc
Q psy10113 330 L--NENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKK 407 (596)
Q Consensus 330 l--~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~ 407 (596)
+ ..+..++++||... .. ..+. +..|.....+++.. ++++.++++++|.|||++||+. +.
T Consensus 238 ~~~~~~~~~~l~TD~~~--~~-~~~~--------------~g~l~~~v~~ai~~-g~~~~~Al~maT~npA~~lgl~-~~ 298 (552)
T TIGR01178 238 INEKNCRSLMLCTDDRH--VN-DILN--------------EGHINHIVRRAIEH-GVDPFDALQMASINPAEHFGID-VG 298 (552)
T ss_pred HhhcCCceEEEEeCCCC--hh-HHHh--------------cCCHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHcCCC-CC
Confidence 2 24578999999421 11 1110 22344444444443 5899999999999999999995 58
Q ss_pred ccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEEC-----Ccee
Q psy10113 408 GVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE-----GNLR 469 (596)
Q Consensus 408 G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~d-----G~~~ 469 (596)
|+|++|+.||||+||.... ..+..||++|++|.++ |+..
T Consensus 299 G~I~pG~~ADlvvl~~l~~-----------------------~~v~~v~~~G~~v~~~~~~~~g~~~ 342 (552)
T TIGR01178 299 GLIAPGDPADFVILKDLRN-----------------------FKVNKTYVKGKLLDLNEVFNDEISR 342 (552)
T ss_pred cccCCCCcCCEEEECCCCC-----------------------ceEEEEEECCEEEcccccccCCccc
Confidence 9999999999999994211 1467999999999997 7754
No 64
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=99.97 E-value=3.6e-30 Score=272.24 Aligned_cols=362 Identities=15% Similarity=0.147 Sum_probs=245.8
Q ss_pred EEEEccEEEcCCCcee-eeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCcccc--C---CCCcchHH
Q psy10113 21 LLIKNGKVVNADKISD-LDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM--G---ATSVDDFY 94 (596)
Q Consensus 21 llIkng~Iv~~d~~~~-~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~--~---~~~~d~~~ 94 (596)
++|+|++|++++.... .+|+|+||+|++|++....+.+.++||++|++|+|||||+|+|...... . ..+.++++
T Consensus 2 ~~i~n~~i~~~~~~~~~~~v~IedgkI~~I~~~~~~~~~~~~ID~~G~~l~PG~ID~HvHG~~g~~~~~~~~~~~~~~l~ 81 (382)
T PRK11170 2 YALTNGRIYTGHEVLDDHAVVIADGLIEAVCPVAELPPGIEQRDLNGAILSPGFIDLQLNGCGGVQFNDTAEAISVETLE 81 (382)
T ss_pred EEEEeeEEECCCCeEeCCEEEEECCEEEEecCCccCCCCCeEEeCCCCEEccceeeeeecCccCcccccCccCCCHHHHH
Confidence 6799999999876664 6999999999999875443445689999999999999999999743222 1 13567888
Q ss_pred HHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeec
Q psy10113 95 HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAY 174 (596)
Q Consensus 95 ~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~ 174 (596)
..++.++++|||+++++..+.+.+.+.++++.+++.......+++++|++++++++.. +|+..-.
T Consensus 82 ~~~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~~a~~~G~HlEGPfi~~~~----------~Gah~~~----- 146 (382)
T PRK11170 82 IMQKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKHPNQALGLHLEGPYLNLVK----------KGTHNPE----- 146 (382)
T ss_pred HHHHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcCCCeEEEEEeecCCCCccc----------CCCCCHH-----
Confidence 8899999999999999998888888888888887765555778999999999998752 3543211
Q ss_pred CCCccCCHHHHHHHHHHHHhcCCe-EEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCC
Q psy10113 175 KGLYMLSDGELYDAFSAIKNLGAI-AMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCP 253 (596)
Q Consensus 175 ~~~~~~~~~~l~~~~~~a~~~g~~-~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p 253 (596)
-....+.+++..+.+.+ . .++ +++-+|... .+.++.+.+.|+...-||+.+..+++. .++.. |.
T Consensus 147 -~~~~p~~~~~~~~~~~~-~-~i~~iTlAPE~~~--~~~i~~l~~~gi~vs~GHs~A~~~~~~-~a~~~--------Ga- 211 (382)
T PRK11170 147 -FIRKPDAEMVDFLCENA-D-VITKVTLAPEMVD--AEVIRKLVEAGIVVSAGHSNATYEEAK-AGFRA--------GI- 211 (382)
T ss_pred -HhcCcCHHHHHHHHhcc-C-CEEEEEECCCCCc--HHHHHHHHHCCcEEEeeCCcCCHHHHH-HHHHc--------CC-
Confidence 11224566666666553 2 333 334445332 478899999999999999998877664 22222 22
Q ss_pred eEEEecCcHHHHHHHHHHHHHHhhcCCceeeE-EeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhc
Q psy10113 254 LYVVHIMSKAAGDAMAYKRKELMKKGKHCTLY-GETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNE 332 (596)
Q Consensus 254 ~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~-~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~ 332 (596)
-+++|+.+.-. -+ ..|+. |+...++ .+-....+..|+.|..+. ....++++.
T Consensus 212 ~~~THlfNaM~--~~-~hR~p----g~vga~l~~~~~~~elI~Dg~Hv~p~------------------~~~~~~~~k-- 264 (382)
T PRK11170 212 TFATHLYNAMP--YI-TGREP----GLVGAILDEPDVYCGIIADGLHVDYA------------------NIRNAKRLK-- 264 (382)
T ss_pred CEEeeccccCC--cc-cCCCc----chhhHhhcCCCcEEEEEcCcccCCHH------------------HHHHHHHhc--
Confidence 13455543100 00 00111 2211111 122344566777776542 111222222
Q ss_pred CCccEEeCCCCCCCh---hhhhhCC------CCCCcCCCC-CcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcC
Q psy10113 333 NALQTTGSDNCTFNK---NQKELGK------DSFTHIPNG-VNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFN 402 (596)
Q Consensus 333 G~~~~~gsD~~~~~~---~~~~~g~------~~f~~~p~G-~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lg 402 (596)
|...++-||.....- ....+|. +.......| ..|....|...++.++...+++++++++++|.|||++||
T Consensus 265 ~~~~~lvtDa~~~~G~~~g~y~l~~~~v~v~~g~~~~~~G~LAGs~l~l~~~v~~l~~~~~~~~~eal~~aT~npA~~lg 344 (382)
T PRK11170 265 GDKLCLVTDATAPAGANIEQFIFAGKTIYYRDGLCVDENGTLSGSALTMIEAVRNLVEHVGIALDEALRMATLYPARAIG 344 (382)
T ss_pred CCcEEEEeccccCCCCCCCeEEECCEEEEEECCEEECCCCcccccHhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhC
Confidence 466778888642111 1111111 112222344 677788888888888888999999999999999999999
Q ss_pred CCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEE
Q psy10113 403 LYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVD 464 (596)
Q Consensus 403 l~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~ 464 (596)
+.+++|+|++|++|||+|||.+- .+..||++|++++-
T Consensus 345 l~~~~G~i~~G~~ADlvvld~~~-------------------------~v~~v~~~G~~~~~ 381 (382)
T PRK11170 345 VDKRLGSIEAGKVANLTAFTRDF-------------------------KITKTIVNGNEVVT 381 (382)
T ss_pred CCCCccccCCCCcCCEEEECCCC-------------------------cEEEEEECCEEeec
Confidence 97778999999999999999761 46799999998863
No 65
>PRK09228 guanine deaminase; Provisional
Probab=99.97 E-value=5.3e-29 Score=269.20 Aligned_cols=361 Identities=16% Similarity=0.086 Sum_probs=211.8
Q ss_pred eeeEEEECCeEEEeccCCCC----CCCCeEEEcCCCEEeeCccccccCCCccccCC---------------------CCc
Q psy10113 36 DLDIYIENGVIQQLGRNLIV----PGGVRVIDAAGSYVIPGGIDPHTHFELELMGA---------------------TSV 90 (596)
Q Consensus 36 ~~dV~IedG~I~~Ig~~~~~----~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~---------------------~~~ 90 (596)
+++|+|+||+|++||+..+. +.+.++||+.|++|||||||+|+|+.+..... .+.
T Consensus 31 ~g~I~I~~g~I~~Vg~~~~~~~~~~~~~~viD~~g~lv~PGlVn~H~H~~~~~~~g~~~~~l~~wl~~~~~~~e~~~~~~ 110 (433)
T PRK09228 31 DGLLLVEDGRIVAAGPYAELRAQLPADAEVTDYRGKLILPGFIDTHIHYPQTDMIASYGEQLLDWLNTYTFPEERRFADP 110 (433)
T ss_pred CeEEEEECCEEEEEcChHHhhhhcCCCCeEEeCCCCEEecceecccccccchhhccCCchHHHHHHHhhhhHHHHHhCCH
Confidence 68999999999999985432 22368999999999999999999985532211 112
Q ss_pred chHHH----HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccc-cc-CC---ChhHHHHHHHHHH
Q psy10113 91 DDFYH----GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVG-IT-WW---SDQVQQEMAELCE 161 (596)
Q Consensus 91 d~~~~----g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~~~~e~~~lv~ 161 (596)
++.+. +...++++||||+.|+....+ ...+++.+.......+...-+++... .+ .+ ..+..++.+++++
T Consensus 111 ~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~--~~~~~~~~a~~~~GiR~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 188 (433)
T PRK09228 111 AYAREVAEFFLDELLRNGTTTALVFGTVHP--QSVDALFEAAEARNMRMIAGKVLMDRNAPDGLRDTAESGYDDSKALIE 188 (433)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEeccccCH--HHHHHHHHHHHHcCCeEEeeeeeecCCCCcccccCHHHHHHHHHHHHH
Confidence 23332 244568999999999753321 12222222222222222222222110 11 11 1222333444443
Q ss_pred H-cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc-CCeEEEecCchhhhHHHHHHHHH-cCCCCCCcccCCChHHHHHH
Q psy10113 162 K-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL-GAIAMVHAENGEIIDKNTQKLLA-AGIKGPEGHQLSRPEEVEAE 238 (596)
Q Consensus 162 ~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~~~vHae~~~~i~~~~~~l~~-~Gi~~~~~~~~~~p~~~e~~ 238 (596)
. .+-...+..++++..+.++++.+.++.+.|+++ +.++++|..+... ....+.+ .|.. +..+ +
T Consensus 189 ~~~~~~~~~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~~i~~Hl~E~~~---e~~~~~~~~g~~---------~~~~--~ 254 (433)
T PRK09228 189 RWHGKGRLLYAITPRFAPTSTPEQLEAAGALAREHPDVWIQTHLSENLD---EIAWVKELFPEA---------RDYL--D 254 (433)
T ss_pred HHhCCCCceEEEECCcCCcCCHHHHHHHHHHHHHCCCCceEEeecCChh---HHHHHHHHcCCC---------CCHH--H
Confidence 3 232345667777777889999999999999997 9999999754321 1111111 1211 1001 1
Q ss_pred HHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceee-EEeeccceeecCCCCCCCccccccccccCCCCC
Q psy10113 239 AVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTL-YGETLAAAVGTHANQIPCTWHDQAAHVLSPPLR 317 (596)
Q Consensus 239 a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v-~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr 317 (596)
. +.-....+-++.+.|+..-.. +.++..++. |. .+ ++......+ . ...+|
T Consensus 255 ~----l~~~G~l~~~~~~~H~~~l~~-~~~~~la~~----g~--~v~~~P~sn~~l-------------g---~g~~~-- 305 (433)
T PRK09228 255 V----YERYGLLGPRAVFAHCIHLED-RERRRLAET----GA--AIAFCPTSNLFL-------------G---SGLFD-- 305 (433)
T ss_pred H----HHHcCCCCCCeEEEeccCCCH-HHHHHHHHc----CC--eEEECCccHHhh-------------c---CCCcC--
Confidence 1 111223456777888775432 234555555 76 32 222221111 0 01122
Q ss_pred CCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhH
Q psy10113 318 PDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNA 397 (596)
Q Consensus 318 ~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~ 397 (596)
+.++++.|+.+++|||....+.. .++ . ++++.....+. ....++++++++++|.||
T Consensus 306 --------~~~~~~~Gv~v~lGtD~~~~~~~-d~~-----~---------~~~~~~~~~~~-~~~~~~~~~~l~~aT~~~ 361 (433)
T PRK09228 306 --------LKRADAAGVRVGLGTDVGGGTSF-SML-----Q---------TMNEAYKVQQL-QGYRLSPFQAFYLATLGG 361 (433)
T ss_pred --------HHHHHHCCCeEEEecCCCCCCCC-CHH-----H---------HHHHHHHHhhc-ccCCCCHHHHHHHHhHHH
Confidence 33788999999999997532111 111 0 34444444433 345689999999999999
Q ss_pred HHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeee---eEEEEEECCEEEEEC
Q psy10113 398 AKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG---VPEYVIVGGRVCVDE 465 (596)
Q Consensus 398 Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g---~~~~Vi~~GrvV~~d 465 (596)
|+++|+++++|+|++|+.||||+||.+................+|+..+.+.+ .|..||++||+|+++
T Consensus 362 A~~lg~~~~~G~l~~Gk~ADlvv~d~~~~~~~~~~~~~~~~~~d~~~~lv~~~~~~~V~~v~VdG~~v~~~ 432 (433)
T PRK09228 362 ARALGLDDRIGNLAPGKEADFVVLDPAATPLLALRTARAESLEELLFALMTLGDDRAVAETYVAGRPVYRR 432 (433)
T ss_pred HHHhCCCCCCcccCCCCCCCEEEEcCCCCccccchhcccCCHHHHHHHHhhcCCccceeEEEECCEEeccC
Confidence 99999977789999999999999998753221100000011134555555443 789999999999875
No 66
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=99.97 E-value=1.2e-29 Score=267.54 Aligned_cols=350 Identities=16% Similarity=0.155 Sum_probs=238.4
Q ss_pred ccEEEEccEEEcCCCce-eeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCc--cccCCCCcchHHH
Q psy10113 19 NRLLIKNGKVVNADKIS-DLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFEL--ELMGATSVDDFYH 95 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~-~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~--~~~~~~~~d~~~~ 95 (596)
++++|+|++|++++... +++|.|+||+|++|++....+.+.++||+.|++|+|||||+|+|... .++ ..+.+++.+
T Consensus 3 ~~~~i~n~~i~~~~~~~~~~~i~V~dGkI~~I~~~~~~~~~~~viD~~G~~i~PGfID~HvHg~~g~~~~-~~~~e~~~~ 81 (380)
T TIGR00221 3 ESYLLKDIAIVTGNEVIDNGAVGINDGKISTVSTEAELEPEIKEIDLPGNVLTPGFIDIHIHGCGGVDTN-DASFETLEI 81 (380)
T ss_pred ceEEEEeeEEECCCCEEeccEEEEECCEEEEEcccccCCCCCeEEECCCCEEccceeeeeeccccCcCCC-CCCHHHHHH
Confidence 56999999999987665 58999999999999876544446689999999999999999999843 222 235688999
Q ss_pred HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHh-ccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeec
Q psy10113 96 GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKA-DEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAY 174 (596)
Q Consensus 96 g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~ 174 (596)
.++.++++|||+++++..+.+.+.+.++++.+.+.. .....+++++|+++++++++. +|+..-.
T Consensus 82 ~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~~~a~~lG~HlEGPfi~~~~----------~Gah~~~----- 146 (380)
T TIGR00221 82 MSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKEKNAQALGLHLEGPFLSPEK----------KGAHPPE----- 146 (380)
T ss_pred HHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhccCCceeeeEeeecCcCChhh----------cCCCCHH-----
Confidence 999999999999999998888888888888887754 334678999999999998742 3543211
Q ss_pred CCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCe
Q psy10113 175 KGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPL 254 (596)
Q Consensus 175 ~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~ 254 (596)
.....+.+++.++++.+... +.++.=|.+-+-..+.++.+.+.|+...-||+.+..+++. .++.. |..
T Consensus 147 -~i~~p~~~~~~~~~~~~~~~-i~~vTlAPE~~~~~~~i~~l~~~gi~vs~GHs~A~~~~~~-~a~~~--------Ga~- 214 (380)
T TIGR00221 147 -YIREPDVELFKKFLCEAGGV-ITKVTLAPEEDQHFELIRHLKDAGIIVSAGHTNATYELAK-AAFKA--------GAT- 214 (380)
T ss_pred -HhhCcCHHHHHHHHHhcCCC-EEEEEECCCCCChHHHHHHHHHCCeEEEeeCCCCCHHHHH-HHHHc--------CCC-
Confidence 12235778888888765422 3333333332334677889999999999999999887664 22222 221
Q ss_pred EEEecCcHHHHHHHHHHHHHHhhcCCce-eeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHh-c
Q psy10113 255 YVVHIMSKAAGDAMAYKRKELMKKGKHC-TLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLN-E 332 (596)
Q Consensus 255 ~i~hv~s~~~~~~i~~a~~~~~~~G~~~-~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~-~ 332 (596)
+++|+.+.-. -+ ..|.. |+.. .+..+-....+..|+-|..+. .+.-+++ .
T Consensus 215 ~~THlfNaM~--~~-~hR~p----g~vga~l~~~~~~~elI~Dg~Hv~p~---------------------~~~~~~r~k 266 (380)
T TIGR00221 215 HATHLYNAMS--PI-HHREP----GVIGAVLDHDDVYTEIIADGIHIHPL---------------------NIRLAKKLK 266 (380)
T ss_pred eeeeeccCCC--Cc-CCCCC----cHHHHHhcCCCcEEEEEcCCCcCCHH---------------------HHHHHHHhc
Confidence 3445443100 00 00111 1100 011122244556777776542 1111111 2
Q ss_pred C-CccEEeCCCCCC---ChhhhhhCC------CCCCcCCCC-CcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHc
Q psy10113 333 N-ALQTTGSDNCTF---NKNQKELGK------DSFTHIPNG-VNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIF 401 (596)
Q Consensus 333 G-~~~~~gsD~~~~---~~~~~~~g~------~~f~~~p~G-~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~l 401 (596)
| ..+++-||.... ......++. +.....+.| +.|....|...+..++..++++++++++++|.|||++|
T Consensus 267 g~~~~~lvtDa~~~~g~~~G~y~l~~~~v~~~~g~~~~~~g~LAGs~ltl~~~v~~l~~~~~~~~~eal~~aT~npA~~l 346 (380)
T TIGR00221 267 GDSKLCLVTDSMAAAGAKDGVFIFGGKTVYIREGTCLDSNGTLAGSSLTMIEGARNLVEFTNISLTDAARMSSLNPARAL 346 (380)
T ss_pred CCCcEEEEeccccccCCCCceEeECCEEEEEECCEEEcCCCceechhhhHHHHHHHHHHhhCCCHHHHHHHHhHHHHHHh
Confidence 4 357778885321 111111111 223233445 68888888888888888888999999999999999999
Q ss_pred CCCCCcccccCCCCccEEEEcCC
Q psy10113 402 NLYPKKGVIAEGSDADIVVWNYK 424 (596)
Q Consensus 402 gl~~~~G~I~~G~~ADlVi~d~~ 424 (596)
|++.++|+|++|++|||++||++
T Consensus 347 gl~~~~G~i~~G~~ADlvv~d~~ 369 (380)
T TIGR00221 347 GIDDRLGSVTVGKDANLVVFTPD 369 (380)
T ss_pred CCCCCCcccCCCCcCCEEEECCC
Confidence 99766899999999999999987
No 67
>PRK05985 cytosine deaminase; Provisional
Probab=99.97 E-value=3.7e-29 Score=267.69 Aligned_cols=351 Identities=19% Similarity=0.205 Sum_probs=207.9
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCC---------
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGAT--------- 88 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~--------- 88 (596)
+++++|+|++|+++. ..+|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+.+.+....
T Consensus 1 ~~~~~i~~~~i~~~~---~~~v~i~~g~i~~i~~~~~~~~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~~~~~~~~~~~~ 77 (391)
T PRK05985 1 MTDLLFRNVRPAGGA---AVDILIRDGRIAAIGPALAAPPGAEVEDGGGALALPGLVDGHIHLDKTFWGDPWYPNEPGPS 77 (391)
T ss_pred CCCEEEECcEECCCC---eeEEEEECCEEEEecCCCCCCCCCcEEECCCCEEecceEeeEEccCccccCCccccCCCCCC
Confidence 357899999999975 56999999999999986554446789999999999999999999964322111
Q ss_pred --------------CcchHH----HHHHHHHhCCceEEeccccCCC--CccHHHHHHHHHHHhccCceeeeeccccccCC
Q psy10113 89 --------------SVDDFY----HGTKAAVAGGTTTIIDFALPRK--GESLIKTYESWRQKADEKVCCDYALHVGITWW 148 (596)
Q Consensus 89 --------------~~d~~~----~g~~~al~~GtTti~D~~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (596)
+.++++ .+.+.+++.|||+++||+...+ +....+++.+.++.........+........+
T Consensus 78 ~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~ 157 (391)
T PRK05985 78 LRERIANERRRRAASGHPAAERALALARAAAAAGTTAMRSHVDVDPDAGLRHLEAVLAARETLRGLIDIQIVAFPQSGVL 157 (391)
T ss_pred HHHHHHHHHHhhccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCcccchHHHHHHHHHHhhCcccEEEEeccCcccc
Confidence 111222 2356778999999999874332 22333444444333322222211111111111
Q ss_pred C-hhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCc-hhhhHHHHHHHHHcCCCCCCc
Q psy10113 149 S-DQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN-GEIIDKNTQKLLAAGIKGPEG 226 (596)
Q Consensus 149 ~-~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~-~~~i~~~~~~l~~~Gi~~~~~ 226 (596)
. ....+.+++..+ .|...+ ..++++....+++++|.++++.|+++|+++.+|+.. ++...
T Consensus 158 ~~~~~~~ll~~~l~-~g~~~~-gg~~p~~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~~d~~~---------------- 219 (391)
T PRK05985 158 SRPGTAELLDAALR-AGADVV-GGLDPAGIDGDPEGQLDIVFGLAERHGVGIDIHLHEPGELGA---------------- 219 (391)
T ss_pred CCcCHHHHHHHHHH-cCCCEE-eCCCCCCcCCCHHHHHHHHHHHHHHhCCCcEEeeCCCCCccH----------------
Confidence 1 122334555444 355422 223444555678899999999999999999999743 22111
Q ss_pred ccCCChHHHHHHHHHHHHHHhcccCC--CeEEEecCcH------HHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCC
Q psy10113 227 HQLSRPEEVEAEAVTRACTIANQVDC--PLYVVHIMSK------AAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHAN 298 (596)
Q Consensus 227 ~~~~~p~~~e~~a~~~~i~la~~~~~--p~~i~hv~s~------~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~ 298 (596)
..+.+.++.+...+. ++.+.|+.+- +..+.++.+++. |+ .|...
T Consensus 220 -----------~~~~~~~e~~~~~g~~~~~~i~H~~~l~~~~~~~~~~~i~~lae~----g~--~v~~~----------- 271 (391)
T PRK05985 220 -----------FQLERIAARTRALGMQGRVAVSHAFCLGDLPEREVDRLAERLAEA----GV--AIMTN----------- 271 (391)
T ss_pred -----------HHHHHHHHHHHHhCCCCCEehhhhhhhhcCCHHHHHHHHHHHHHc----CC--eEEEe-----------
Confidence 111122222223333 3677777532 123456666666 77 43211
Q ss_pred CCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHH-h
Q psy10113 299 QIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWE-K 377 (596)
Q Consensus 299 ~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~-~ 377 (596)
+|.. .....+.++++.|+.+++|||+...+. .|.+....-..+..... .
T Consensus 272 ---------------~~~~---~~~~~~~~l~~~Gv~v~lGtD~~~~~~------------~p~~~~~~~~~~~~~~~~~ 321 (391)
T PRK05985 272 ---------------APGS---VPVPPVAALRAAGVTVFGGNDGIRDTW------------WPYGNGDMLERAMLIGYRS 321 (391)
T ss_pred ---------------CCCC---CCCCCHHHHHHCCCeEEEecCCCCCCC------------cCCCCCcHHHHHHHHHHHH
Confidence 0000 011224479999999999999742110 01111111112221111 1
Q ss_pred hccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEE
Q psy10113 378 GVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIV 457 (596)
Q Consensus 378 ~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~ 457 (596)
.+. ...++.++++++|.|+|+++|++. ++|++|+.||||+||.+........ ...+..||+
T Consensus 322 ~~~-~~~~~~~al~~~T~~~A~~lg~~~--~~l~~G~~ADlvvld~~~~~~~~~~----------------~~~~~~v~~ 382 (391)
T PRK05985 322 GFR-TDDELAAALDCVTHGGARALGLED--YGLAVGARADFVLVDAETVAEAVVA----------------VPVRRLVVR 382 (391)
T ss_pred ccC-ChHHHHHHHHHHcchhHHHhCCcc--cCCCCCCcCCEEEECCCCHHHHHhh----------------CCcceEEEE
Confidence 111 122467999999999999999954 4599999999999998854222110 113467999
Q ss_pred CCEEEEECC
Q psy10113 458 GGRVCVDEG 466 (596)
Q Consensus 458 ~GrvV~~dG 466 (596)
+||+||++|
T Consensus 383 ~G~~v~~~~ 391 (391)
T PRK05985 383 GGRIVARDG 391 (391)
T ss_pred CCEEEecCC
Confidence 999999986
No 68
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=99.97 E-value=2.9e-29 Score=269.07 Aligned_cols=355 Identities=19% Similarity=0.207 Sum_probs=206.5
Q ss_pred EEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCC--------------
Q psy10113 22 LIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGA-------------- 87 (596)
Q Consensus 22 lIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~-------------- 87 (596)
.|+|++|+|+. ...++|+|+||+|++||+....+++.++||++|++|||||||+|+|+.+.+...
T Consensus 1 ~~~~~~~~~~~-~~~~~v~I~~g~I~~Vg~~~~~~~~~~vID~~g~~v~PGlId~H~H~~~~~~~~~~~~~~~~~~~~~~ 79 (398)
T cd01293 1 LLRNARLADGG-TALVDIAIEDGRIAAIGPALAVPPDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNNSGGTLLEAI 79 (398)
T ss_pred CeeeeEEeCCC-ceEEEEEEECCEEEEEecCCCCCCCCceEeCCCCEEccCEeeeeeccCcccccCCCCCCCccccHHHH
Confidence 37899999974 578999999999999998766556789999999999999999999996532111
Q ss_pred ---------CCcchHH----HHHHHHHhCCceEEeccccCCCC--ccHHHHHHHHHHHhccCceee-eeccccccCCC-h
Q psy10113 88 ---------TSVDDFY----HGTKAAVAGGTTTIIDFALPRKG--ESLIKTYESWRQKADEKVCCD-YALHVGITWWS-D 150 (596)
Q Consensus 88 ---------~~~d~~~----~g~~~al~~GtTti~D~~~~~~~--~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~-~ 150 (596)
.++++.+ .+...+++.||||++++...... ....+++.+++.......... ..+.. ...+. +
T Consensus 80 ~~~~~~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 158 (398)
T cd01293 80 IAWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQIVAFPQ-HGLLSTP 158 (398)
T ss_pred HHHHHHHhccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhccceEEEEeccC-ccccCCC
Confidence 2233333 34556789999999887643221 122334444433332111111 11110 01111 2
Q ss_pred hHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchh-hhHHHHHHHHHcCCCCCCcccC
Q psy10113 151 QVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGE-IIDKNTQKLLAAGIKGPEGHQL 229 (596)
Q Consensus 151 ~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~-~i~~~~~~l~~~Gi~~~~~~~~ 229 (596)
+..+.+++..+ .|...+. .+.+.....++++++.++++.|+++|+++.+|+.+.. ...
T Consensus 159 ~~~~~v~~~~~-~g~~~~~-~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~------------------- 217 (398)
T cd01293 159 GGEELMREALK-MGADVVG-GIPPAEIDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGS------------------- 217 (398)
T ss_pred CHHHHHHHHHH-hCCCEEe-CCCCCcCCccHHHHHHHHHHHHHHhCCCCEEEeCCCCCcch-------------------
Confidence 33334444443 3543222 2223233456889999999999999999999985421 100
Q ss_pred CChHHHHHHHHHHHHHHhcccC--CCeEEEecCcH------HHHHHHHHHHHHHhhcCCceeeE-EeeccceeecCCCCC
Q psy10113 230 SRPEEVEAEAVTRACTIANQVD--CPLYVVHIMSK------AAGDAMAYKRKELMKKGKHCTLY-GETLAAAVGTHANQI 300 (596)
Q Consensus 230 ~~p~~~e~~a~~~~i~la~~~~--~p~~i~hv~s~------~~~~~i~~a~~~~~~~G~~~~v~-~e~~~~~l~~~~~~~ 300 (596)
..+...+..+.+.+ -++.+.|+... +..+.++.+++. |+ .+. +......+... ...
T Consensus 218 --------~~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~----g~--~v~~~p~s~~~l~~~-~~~ 282 (398)
T cd01293 218 --------RTLEELAEEAERRGMQGRVTCSHATALGSLPEAEVSRLADLLAEA----GI--SVVSLPPINLYLQGR-EDT 282 (398)
T ss_pred --------hHHHHHHHHHHHhCCCCCEEeeecchhhcCCHHHHHHHHHHHHHc----CC--eEEeCCCcchhhccc-ccC
Confidence 11111222223333 25667777543 223557777776 77 432 22211111000 000
Q ss_pred CCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcch--HHHHHHHHHhh
Q psy10113 301 PCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGV--QDRLSVIWEKG 378 (596)
Q Consensus 301 ~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~--e~~~~~~~~~~ 378 (596)
+ | . ......+..++++|+.+++|||..... + .|++.... ++++......
T Consensus 283 ---~---------~-~---~~~~~~~~~~~~~Gv~v~lGTD~~~~~----------~--~~~~~~~~~~~~~~~~~~~~- 333 (398)
T cd01293 283 ---T---------P-K---RRGVTPVKELRAAGVNVALGSDNVRDP----------W--YPFGSGDMLEVANLAAHIAQ- 333 (398)
T ss_pred ---C---------C-C---CCCCCcHHHHHHCCCeEEECCCCCCCC----------C--cCCCCCCHHHHHHHHHHHHc-
Confidence 0 0 0 112234558999999999999974200 0 01111111 1222121111
Q ss_pred ccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEEC
Q psy10113 379 VVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVG 458 (596)
Q Consensus 379 v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~ 458 (596)
. ....+..++++++|.|+|+++|+ +.|+|++||.||||+||.+....+... ...+..||.+
T Consensus 334 ~-~~~~~~~~al~~aT~~~A~~lg~--~~G~l~~Gk~ADlv~~d~~~~~~~~~~----------------~~~~~~v~~~ 394 (398)
T cd01293 334 L-GTPEDLALALDLITGNAARALGL--EDYGIKVGCPADLVLLDAEDVAEAVAR----------------QPPRRVVIRK 394 (398)
T ss_pred C-CChhhHHHHHHhcChhhhhhcCC--cCcccccCCcceEEEECCCCHHHHHhc----------------CCCccEEEEC
Confidence 1 11234578999999999999999 579999999999999999855443211 1257899999
Q ss_pred CEEE
Q psy10113 459 GRVC 462 (596)
Q Consensus 459 GrvV 462 (596)
|++|
T Consensus 395 G~~~ 398 (398)
T cd01293 395 GRVV 398 (398)
T ss_pred CEEC
Confidence 9975
No 69
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=99.97 E-value=2.7e-29 Score=269.85 Aligned_cols=355 Identities=18% Similarity=0.120 Sum_probs=210.3
Q ss_pred eeeEEEECCeEEEeccCCC----CCCCCeEEEcCCCEEeeCccccccCCCccccC-C--------------------CCc
Q psy10113 36 DLDIYIENGVIQQLGRNLI----VPGGVRVIDAAGSYVIPGGIDPHTHFELELMG-A--------------------TSV 90 (596)
Q Consensus 36 ~~dV~IedG~I~~Ig~~~~----~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~-~--------------------~~~ 90 (596)
+++|+|+||+|++||+... .+.+.++||++|++|||||||+|+|+...... . .+.
T Consensus 6 ~~~V~V~~g~I~~Vg~~~~~~~~~~~~~~viD~~g~~v~PGlId~H~Hl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (401)
T TIGR02967 6 DGLLVVENGRIVAVGDYAELKETLPAGVEIDDYRGHLIMPGFIDTHIHYPQTEMIASYGEQLLEWLEKYTFPTEARFADP 85 (401)
T ss_pred ceEEEEECCEEEEecCcchhhhccCCCCeEEeCCCCEEecceeecccCchhhhhcccCCchHHHHHhhCcCccccccCCH
Confidence 5799999999999998543 23456899999999999999999998543221 0 012
Q ss_pred chHH----HHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc-ccc----CCChhHHHHHHHHHH
Q psy10113 91 DDFY----HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV-GIT----WWSDQVQQEMAELCE 161 (596)
Q Consensus 91 d~~~----~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~e~~~lv~ 161 (596)
++.+ .+...++++||||++|+...... ..+++.+.......+....+.... ..+ .......++.+++++
T Consensus 86 ~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~--~~~~~~~a~~~~G~R~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~i~ 163 (401)
T TIGR02967 86 DHAEEVAEFFLDELLRNGTTTALVFATVHPE--SVDALFEAALKRGMRMIAGKVLMDRNAPDYLRDTAESSYDESKALIE 163 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCcEEEeccccCHH--HHHHHHHHHHHCCCeEEEeeeeecCCCCcccccCHHHHHHHHHHHHH
Confidence 2222 23457789999999998643321 112222222222112211111100 011 111233445666654
Q ss_pred H-cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc-CCeEEEecC-chhhhHHHHHHHHHcCCCCCCcccCCChHHHHHH
Q psy10113 162 K-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL-GAIAMVHAE-NGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAE 238 (596)
Q Consensus 162 ~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~~~vHae-~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~ 238 (596)
+ .+...++..++++....+++++|.++++.|+++ |.++++|+. +...+....+ ..|. +|..+ +
T Consensus 164 ~~~~~g~i~~~~~~~~~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~---~~~~---------~~~~~--~ 229 (401)
T TIGR02967 164 RWHGKGRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKE---LFPE---------AKDYL--D 229 (401)
T ss_pred HHhCcCCceEEEECCcCCcCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHH---HcCC---------CCcHH--H
Confidence 3 343457788888888889999999999999999 999999975 4332221111 1111 01111 1
Q ss_pred HHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeE-EeeccceeecCCCCCCCccccccccccCCCCC
Q psy10113 239 AVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLY-GETLAAAVGTHANQIPCTWHDQAAHVLSPPLR 317 (596)
Q Consensus 239 a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~-~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr 317 (596)
.+.-....+....+.|+..-.. +.++.+++. |+ .+. +......+. ...+|
T Consensus 230 ----~l~~~g~lg~~~~~~H~~~~~~-~~~~~l~~~----g~--~v~~~P~~~~~~~----------------~g~~~-- 280 (401)
T TIGR02967 230 ----VYDHYGLLGRRSVFAHCIHLSD-EECQRLAET----GA--AIAHCPTSNLFLG----------------SGLFN-- 280 (401)
T ss_pred ----HHHHCCCCCCCeEEEecccCCH-HHHHHHHHc----CC--eEEEChHHHHHhc----------------cCCCC--
Confidence 1111233455677778774332 345666666 76 432 222211110 01222
Q ss_pred CCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhH
Q psy10113 318 PDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNA 397 (596)
Q Consensus 318 ~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~ 397 (596)
+..+++.|+.+++|||....+.. .++ -+.++...+.+.. ...+++.++++++|.||
T Consensus 281 --------~~~~~~~Gv~v~lGtD~~~~~~~-~~~--------------~~~~~~~~~~~~~-~~~~~~~~~l~~aT~~~ 336 (401)
T TIGR02967 281 --------LKKALEHGVRVGLGTDVGGGTSF-SML--------------QTLREAYKVSQLQ-GARLSPFEAFYLATLGG 336 (401)
T ss_pred --------HHHHHHCCCeEEEecCCCCCCCc-CHH--------------HHHHHHHHHhhhc-CCCCCHHHHHHHHHHHH
Confidence 33688999999999997432111 110 0334444443333 34689999999999999
Q ss_pred HHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeee---eEEEEEECC
Q psy10113 398 AKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG---VPEYVIVGG 459 (596)
Q Consensus 398 Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g---~~~~Vi~~G 459 (596)
|++||+++++|+|++|+.||||++|.+.+...+..........+|+..+.+.+ .|..||++|
T Consensus 337 A~~lg~~~~~G~i~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~v~G 401 (401)
T TIGR02967 337 ARALDLDDRIGNFEPGKEADFVVLDPAATPLLALRFEGADTLEDKLFKLMYLGDDRNVAETYVAG 401 (401)
T ss_pred HHHhCCcCCccccCCCCccCEEEEcCCCCcccccccccccchhhHHHHheeecCccceeEEEeCC
Confidence 99999977899999999999999998865332210000011246777776665 588999988
No 70
>PRK09356 imidazolonepropionase; Validated
Probab=99.97 E-value=1.1e-28 Score=265.65 Aligned_cols=346 Identities=23% Similarity=0.217 Sum_probs=199.7
Q ss_pred cccEEEEccEEEcCCC--------ceeeeEEEECCeEEEeccCCCCCC--CCeEEEcCCCEEeeCccccccCCCccccC-
Q psy10113 18 QNRLLIKNGKVVNADK--------ISDLDIYIENGVIQQLGRNLIVPG--GVRVIDAAGSYVIPGGIDPHTHFELELMG- 86 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~--------~~~~dV~IedG~I~~Ig~~~~~~~--~~~vIDa~G~~V~PG~ID~HtHl~~~~~~- 86 (596)
+++++|+|++|++.+. ..+++|+|+||+|++||+....+. +.++||+.|++|||||||+|+|+.+++..
T Consensus 2 ~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~~ 81 (406)
T PRK09356 2 MADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPAAYAAEVIDAGGKLVTPGLIDCHTHLVFGGNRA 81 (406)
T ss_pred CceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCccccccccCceEEECCCCEEeeceEecCCCcccCCCcH
Confidence 4679999999998653 226899999999999998654332 36899999999999999999999653210
Q ss_pred ------------------------------CCCcchHHH----HHHHHHhCCceEEeccccC-CCCcc---HHHHHHHHH
Q psy10113 87 ------------------------------ATSVDDFYH----GTKAAVAGGTTTIIDFALP-RKGES---LIKTYESWR 128 (596)
Q Consensus 87 ------------------------------~~~~d~~~~----g~~~al~~GtTti~D~~~~-~~~~~---~~~a~~~~~ 128 (596)
..+.++++. +...++++||||+.++... ..... ..++++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~ 161 (406)
T PRK09356 82 NEFELRLQGVSYEEIAAQGGGILSTVRATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYGLDLETELKMLRVARRLG 161 (406)
T ss_pred HHHHHHHCCCcHHHHHHhcCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCHHHHHHHHHHHHHHh
Confidence 012233332 3345688999999876311 11111 223333332
Q ss_pred HHhccCcee-eeeccccccCCC---hhHHHH----HHHHHH-HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeE
Q psy10113 129 QKADEKVCC-DYALHVGITWWS---DQVQQE----MAELCE-KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIA 199 (596)
Q Consensus 129 ~~~~~~~~~-~~~~~~~~~~~~---~~~~~e----~~~lv~-~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~ 199 (596)
......... ..+.+.....+. +...++ +.+.+. ..++...+.+.. ...++++++.++++.|+++|+++
T Consensus 162 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~l~~~~~~A~~~g~~v 238 (406)
T PRK09356 162 EEHPVDVVTTFLGAHAVPPEYKGRPDAYIDLVCEEMLPAVAEEGLADAVDVFCE---TGAFSVEQSERVLEAAKALGLPV 238 (406)
T ss_pred hhCCCceEeeeeecccCCccccCCHHHHHHHHHHHHhHHHHhcCCcceEEEEec---CCCCCHHHHHHHHHHHHHCCCCE
Confidence 221111110 011111011111 111112 222211 224555554432 23568999999999999999999
Q ss_pred EEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcC
Q psy10113 200 MVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKG 279 (596)
Q Consensus 200 ~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G 279 (596)
.+|+...... ...+.+.+.|.. .+.|+..-. .+.+++.++. |
T Consensus 239 ~~H~~~~~~~-~~~~~~~~~~~~--------------------------------~~~H~~~~~-~~~~~~la~~----g 280 (406)
T PRK09356 239 KIHAEQLSNL-GGAELAAEYGAL--------------------------------SADHLEYLD-EAGIAAMAEA----G 280 (406)
T ss_pred EEEEecccCC-CHHHHHHHcCCc--------------------------------EehHhhcCC-HHHHHHHHHh----C
Confidence 9998532100 011111111211 122333211 1234444455 6
Q ss_pred CceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCC-CChhhhhhCCCCCC
Q psy10113 280 KHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCT-FNKNQKELGKDSFT 358 (596)
Q Consensus 280 ~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~-~~~~~~~~g~~~f~ 358 (596)
+ .+ .+++.+... + + ......+.++++.|+.+++|||+.+ .+...
T Consensus 281 ~--~~--~~~P~~~~~-----l---------------~--~~~~~~~~~l~~~Gi~v~lgtD~~~~~~~~~--------- 325 (406)
T PRK09356 281 T--VA--VLLPGAFYF-----L---------------R--ETQYPPARLLRDAGVPVALATDFNPGSSPTE--------- 325 (406)
T ss_pred C--EE--EECccchhh-----c---------------C--cccCchHHHHHHCCCeEEEeCCCCCCCChhH---------
Confidence 5 32 222221100 0 0 0011124468899999999999854 22111
Q ss_pred cCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCC
Q psy10113 359 HIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHAC 438 (596)
Q Consensus 359 ~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~ 438 (596)
.+...+..++...++++.++++++|.|||+++|+++++|+|++|+.|||||+|.+....+..
T Consensus 326 -----------~~~~~~~~~~~~~~l~~~~~l~~~T~~~A~~~g~~~~~G~i~~G~~AD~vvld~~~~~~~~~------- 387 (406)
T PRK09356 326 -----------SLLLAMNMACTLFRLTPEEALAAVTINAARALGRQDTHGSLEVGKKADLVIWDAPSPAELPY------- 387 (406)
T ss_pred -----------HHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEECCCchhhhhh-------
Confidence 11112222223457899999999999999999998889999999999999999875422211
Q ss_pred CCCcccCeEeeeeEEEEEECCEEEEE
Q psy10113 439 DYNIFEGLVCHGVPEYVIVGGRVCVD 464 (596)
Q Consensus 439 ~~~~~~g~~~~g~~~~Vi~~GrvV~~ 464 (596)
......|..||++||+||+
T Consensus 388 -------~~~~~~v~~v~v~G~~vy~ 406 (406)
T PRK09356 388 -------HFGVNPVETVVKNGEVVVD 406 (406)
T ss_pred -------hhCCCCccEEEECCEEeeC
Confidence 0123478999999999984
No 71
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=7.6e-30 Score=260.19 Aligned_cols=363 Identities=20% Similarity=0.236 Sum_probs=263.1
Q ss_pred EEEEccEEEcCCCcee-eeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCC--ccccCCCCcchHHHHH
Q psy10113 21 LLIKNGKVVNADKISD-LDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFE--LELMGATSVDDFYHGT 97 (596)
Q Consensus 21 llIkng~Iv~~d~~~~-~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~--~~~~~~~~~d~~~~g~ 97 (596)
.+|+|++|+++....+ +.|.|+||+|.+|.+ .+.|.+.++||.+|.+|+|||||+|+|-. ..++...+.+.+.+.+
T Consensus 2 ~~~~~~~i~t~~~~~~~~~v~i~dg~I~~i~~-~~~p~~~e~id~~G~~l~PGfID~hihG~gG~~~~D~~~~~~l~~i~ 80 (380)
T COG1820 2 YALKNGRIFTGHGVLDGGAVVIEDGKIEAVVP-AELPADAEIIDLKGALLVPGFIDLHIHGGGGADFMDAGSVETLETMA 80 (380)
T ss_pred ceeeccEEEcCcceEECcEEEEcCCEEEEEec-CcCCCcceeecCCCCEecccEEEEeecCcCcccccCccCHHHHHHHH
Confidence 4789999999988775 599999999999998 44677899999999999999999999974 3556556778888999
Q ss_pred HHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCC
Q psy10113 98 KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGL 177 (596)
Q Consensus 98 ~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~ 177 (596)
+..++.|||+++....+.+.+.+.++++..++..........|+|++.++++++. +|+.... -.
T Consensus 81 ~~~~~~GtTsfLpT~iT~~~e~i~~al~~~~e~~~~~ga~ilGiHLEGP~ls~~k----------kGAh~~~------~i 144 (380)
T COG1820 81 EAHLRHGTTSFLPTLITASLEKIKAALRAIREAIAKGGAQILGIHLEGPFLSPEK----------KGAHNPE------YI 144 (380)
T ss_pred HHhhhcCeeeeeeecccCCHHHHHHHHHHHHHHHhccCCceEEEEeecCccCHhh----------ccCCCHH------Hh
Confidence 9999999999998888888888999999998888866777899999999998753 4664322 12
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEE
Q psy10113 178 YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVV 257 (596)
Q Consensus 178 ~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~ 257 (596)
...+++++.++++.++..=..+.+-+|+. -..+..+.+.+.|+...-||+....+++- .++.. +. .+++
T Consensus 145 r~~~~~~~~~~~~~a~g~i~~vTlAPE~~-~~~e~i~~l~~~giivs~GHS~Atye~~~-----~a~~~----Ga-~~~T 213 (380)
T COG1820 145 RPPDPEELEQLIAAADGLIKLVTLAPELD-GTKELIRLLANAGIVVSIGHSNATYEQAR-----AAFEA----GA-TFVT 213 (380)
T ss_pred CCCCHHHHHHHHhhccCceEEEEECCCCC-CCHHHHHHHHhCCeEEEecCccccHHHHH-----HHHHh----Cc-cEEE
Confidence 24688889988888776323344445553 24678889999999999999998876553 23222 21 2344
Q ss_pred ecCcHHHHHHHHHHHHHHhhcCCceeeEEe-eccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHH--hcCC
Q psy10113 258 HIMSKAAGDAMAYKRKELMKKGKHCTLYGE-TLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLL--NENA 334 (596)
Q Consensus 258 hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e-~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l--~~G~ 334 (596)
|+...-. -+ ..|+. |+.-.++.. -....+..||-|..+. .+.-++ +-+.
T Consensus 214 HlfNaMs--~l-~hREP----GvvGA~L~~~~~~~eiIaDG~HVhP~---------------------~~~ia~~~kg~~ 265 (380)
T COG1820 214 HLFNAMS--GL-HHREP----GVVGAALDNPDVYAEIIADGVHVHPA---------------------AIRLALKAKGGD 265 (380)
T ss_pred eeccCCC--CC-CCCCC----cccceeecCCCeEEEEEccCcccCHH---------------------HHHHHHhccCCc
Confidence 5432100 00 01222 431112222 2344556677776542 111122 2235
Q ss_pred ccEEeCCCCCC---ChhhhhhCC------CCCCcCCCC-CcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCC
Q psy10113 335 LQTTGSDNCTF---NKNQKELGK------DSFTHIPNG-VNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLY 404 (596)
Q Consensus 335 ~~~~gsD~~~~---~~~~~~~g~------~~f~~~p~G-~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~ 404 (596)
.+++-||...- ...+..++. +.....++| ++|....|...++.+++.++++++|+++|+|.||||+||+.
T Consensus 266 ~i~LVTDam~a~G~~dg~y~lgg~~V~v~~g~~~~~~GtLAGS~Ltm~~avrn~v~~~~~~~~eAv~maS~~PA~~lgl~ 345 (380)
T COG1820 266 KIVLVTDAMAAAGLPDGEYILGGQTVTVADGARRLEDGTLAGSTLTMDEAVRNLVEWGGISLAEAVRMASLNPAKALGLD 345 (380)
T ss_pred eEEEEEccccccCCCCccEEECCEEEEEECCEEECCCCceeeeeeeHHHHHHHHHHHhCCCHHHHHHHhhhhHHHHhCCc
Confidence 67888887432 111222221 244555666 58899999999999999999999999999999999999998
Q ss_pred CCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEE
Q psy10113 405 PKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVD 464 (596)
Q Consensus 405 ~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~ 464 (596)
+++|+|++|++||||+||.+- .+..||++|++++.
T Consensus 346 ~~~G~i~~G~~Adlvvld~d~-------------------------~v~~T~i~G~~~~~ 380 (380)
T COG1820 346 DRLGSIKPGKDADLVVLDDDL-------------------------NVKATWINGEKVFN 380 (380)
T ss_pred CcccccCCCcccCEEEECCCC-------------------------cEEEEEECCEEeeC
Confidence 899999999999999999871 46799999999873
No 72
>PLN02303 urease
Probab=99.97 E-value=1.2e-29 Score=279.68 Aligned_cols=360 Identities=18% Similarity=0.226 Sum_probs=214.5
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCC--C----------CCCeEEEcCCCEEeeCccccccCCCcccc
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIV--P----------GGVRVIDAAGSYVIPGGIDPHTHFELELM 85 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~--~----------~~~~vIDa~G~~V~PG~ID~HtHl~~~~~ 85 (596)
..+++|+|++|+|......+||+|+||+|++|++.... + .+.++||++|++|+|||||+|+|+..|..
T Consensus 333 ~~DlVItNa~IID~~Gi~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGlIVtPG~ID~HVHf~~Pg~ 412 (837)
T PLN02303 333 SLDTVITNAVIIDYTGIYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGMIVTAGGIDCHVHFICPQL 412 (837)
T ss_pred cCCEEEeCeEEECCCCcEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCCEEEeCEEEeecCCCCCcH
Confidence 45799999999997677789999999999999974211 1 14789999999999999999999965521
Q ss_pred CCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCC
Q psy10113 86 GATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGV 165 (596)
Q Consensus 86 ~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv 165 (596)
..+.+..|+..++.+|+|++-++ .+.......+.++...+.++ ...++++++..... +..+++.++++ .|+
T Consensus 413 ---~~eaLasGVTTai~GGtgp~pnT-~ptt~t~g~e~I~~~L~aa~-~~pvn~Gf~gkG~~---s~l~eL~elie-aGa 483 (837)
T PLN02303 413 ---ATEAIASGITTLVGGGTGPAHGT-CATTCTPAPSHMKLMLQSTD-DLPLNFGFTGKGNT---AKPEGLHEIIK-AGA 483 (837)
T ss_pred ---HHHHHHHhHHHHHhcCCCCCCcc-cCcCCCCCHHHHHHHHHhcc-cCCCcEEEEccCcc---cCHHHHHHHHH-cCc
Confidence 24455555555555555543111 11110012334444444333 34578888764322 33557777754 599
Q ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHH
Q psy10113 166 NSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACT 245 (596)
Q Consensus 166 ~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~ 245 (596)
.+||.+.. +.++++.+.++++.|+++|.++++|+|+-.........+...|
T Consensus 484 ~GfK~h~d----~gvTpelL~raLe~AkelGVpVaIHAEdLnE~G~vE~t~~a~G------------------------- 534 (837)
T PLN02303 484 MGLKLHED----WGTTPAAIDNCLDVAEEYDIQVTIHTDTLNESGCVEHSIAAFK------------------------- 534 (837)
T ss_pred EEEEECCC----CCCCHHHHHHHHHHHHHcCCEEEEecCcccccchHHHHHHHHC-------------------------
Confidence 99997643 3478999999999999999999999988321000000111111
Q ss_pred HhcccCCCeEEEecC---cHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCC-------
Q psy10113 246 IANQVDCPLYVVHIM---SKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPP------- 315 (596)
Q Consensus 246 la~~~~~p~~i~hv~---s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pp------- 315 (596)
+.|++..|-. ...+.++|+-+... .+.|.-+..+.+....+-+.|+.-- -.++-.+|.
T Consensus 535 -----~RpIh~~h~~Ga~gghapdi~~~~~~~----nvlpsstnpt~p~t~nt~~e~~dm~---m~~h~l~~~~~edvaf 602 (837)
T PLN02303 535 -----GRTIHTYHSEGAGGGHAPDIIKVCGVK----NVLPSSTNPTRPYTKNTIDEHLDML---MVCHHLDKNIPEDVAF 602 (837)
T ss_pred -----CChHHHHHhcCCCCCCCcHHHHhcCCC----CccCCCCCCCCCCccCchhhhcCeE---EeecCCCCCCcchhhh
Confidence 1122211111 23344454444332 3333333333333333222222210 111112222
Q ss_pred ----CCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHh--------h-c---
Q psy10113 316 ----LRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEK--------G-V--- 379 (596)
Q Consensus 316 ----lr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~--------~-v--- 379 (596)
+|. ++..+---+-+.|+..+++||...... +.+....+|+. + +
T Consensus 603 a~srir~--~tiaaed~l~d~G~~s~~~SDs~amgr-------------------~ge~i~r~~q~A~k~~~~~g~l~~~ 661 (837)
T PLN02303 603 AESRIRA--ETIAAEDILHDMGAISIISSDSQAMGR-------------------IGEVITRTWQTAHKMKSQRGALEPR 661 (837)
T ss_pred hhhhccc--hhhccchhhhccCCEEEEeccchhhCc-------------------ccceeeehHHHHHHHHHhcCCCCCc
Confidence 332 232222224457999999999752110 00000111110 0 0
Q ss_pred --cCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEE
Q psy10113 380 --VPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIV 457 (596)
Q Consensus 380 --~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~ 457 (596)
.....+..++|+..|.|||+++|+++++|+|++||.||||||+++ +|. ..|..||+
T Consensus 662 ~~~~dn~rv~~aL~~~TiN~A~AlG~~~~vGSLe~GK~ADlVvw~~~-----------------~fg-----~~~~~vi~ 719 (837)
T PLN02303 662 GADNDNFRIKRYIAKYTINPAIAHGMSHFVGSVEVGKLADLVLWKPA-----------------FFG-----AKPEMVIK 719 (837)
T ss_pred cccccccCHHHHHHHHhHHHHHHCCcccCceeeCCCcccCEEEeccc-----------------ccC-----CCeeEEEE
Confidence 124567799999999999999999999999999999999999975 121 25789999
Q ss_pred CCEEEEEC-Cceee
Q psy10113 458 GGRVCVDE-GNLRV 470 (596)
Q Consensus 458 ~GrvV~~d-G~~~~ 470 (596)
+|++||.. |....
T Consensus 720 ~G~ivy~~~gd~na 733 (837)
T PLN02303 720 GGQIAWAQMGDPNA 733 (837)
T ss_pred CCEEEEccCCCccc
Confidence 99999986 65443
No 73
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=3.3e-29 Score=265.38 Aligned_cols=346 Identities=22% Similarity=0.233 Sum_probs=204.7
Q ss_pred cccEEEEccEEEc-CCCceeeeEEEECCeEEEeccC-CCCCCCCeEEEcCCCEEeeCccccccCCCccccCC------CC
Q psy10113 18 QNRLLIKNGKVVN-ADKISDLDIYIENGVIQQLGRN-LIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGA------TS 89 (596)
Q Consensus 18 ~~~llIkng~Iv~-~d~~~~~dV~IedG~I~~Ig~~-~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~------~~ 89 (596)
.+.+++++++.++ -....++.|+|+||||+.||+. ...+.+.++||++|++|+|||||+|||+.+..... ..
T Consensus 9 ~~~~~~~~~~~~~~~~~i~~~~v~i~~GkI~~vg~~~~~~~~~~~viD~~G~~V~PGLID~HtHl~~~~~~~~~~~~~~~ 88 (406)
T COG1228 9 IAMLATLAGRGLPGLGIIEDGAVLIEDGKIVAVGPEEIDIPAGAEVIDAKGKTVTPGLIDAHTHLGFGGSRGGEFELREA 88 (406)
T ss_pred hhhheeeccccCCCcceeecceEEEECCEEEEecCcccCCCCCCeEEeCCCCEEccceeeccccccccCCccchhhhccc
Confidence 3568889999887 4455579999999999999987 56777899999999999999999999995421100 00
Q ss_pred cchH-----------------------------HHHHHHHHhCCceEEeccccCCCCccH-HHHHHHHHHHhccCceeee
Q psy10113 90 VDDF-----------------------------YHGTKAAVAGGTTTIIDFALPRKGESL-IKTYESWRQKADEKVCCDY 139 (596)
Q Consensus 90 ~d~~-----------------------------~~g~~~al~~GtTti~D~~~~~~~~~~-~~a~~~~~~~~~~~~~~~~ 139 (596)
...+ ......+++.|+|+.--.....-.... ...++........ .....
T Consensus 89 ~~~~~~i~~~~~gi~~~~~~~~~a~~~g~~~~~~~~l~~~~~~g~~~~e~~~~~g~~~~~e~~~~~~~~~~~~~-~~~~~ 167 (406)
T COG1228 89 GASYTEILAAGGGILPLDRGFTTARDGGLKATALPRLKRAGSAGVTTGERKSGYGLDLETEGGHLRAAAGLKES-RPVAV 167 (406)
T ss_pred CccHHHHHHhcCChhhhHHHHHHHhhcchHHHHHHHHHHHHHcCCcccceeeeecccccccccccchhhhcccc-ccccc
Confidence 0000 011223455666665322111000000 0001111111100 00000
Q ss_pred -ec---cccccCCChh----HHHHHHH---HHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhh
Q psy10113 140 -AL---HVGITWWSDQ----VQQEMAE---LCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEI 208 (596)
Q Consensus 140 -~~---~~~~~~~~~~----~~~e~~~---lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~ 208 (596)
.. ..+.+.+... ..+.+.. .+...|..++.- ........++++++++++.+++.|+++.+||+..+
T Consensus 168 ~~t~~~~~~~~~~~~~~r~~~~~g~~~~i~~~a~~~l~~~~d--~~~~~~~fs~~e~~~~l~~a~~~g~~v~~HA~~~~- 244 (406)
T COG1228 168 GSTPLAAHGVPEERKATREAYVAGARLLIKIVATGGLASFVD--AFCEGGQFSPEEIRAVLAAALKAGIPVKAHAHGAD- 244 (406)
T ss_pred cCccccccCCcccccchHHHHHHHHHHHHHHHHhccccchhh--ccccccccCHHHHHHHHHHHHHCCCceEEEecccc-
Confidence 00 0112222221 1222222 222334444321 02234567999999999999999999999998865
Q ss_pred hHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHH--HHhhcCCceeeEE
Q psy10113 209 IDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRK--ELMKKGKHCTLYG 286 (596)
Q Consensus 209 i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~--~~~~~G~~~~v~~ 286 (596)
..+...+.|+...+|..+...+... .+++ . |. . +.
T Consensus 245 ---g~~~A~~~g~~s~~H~~~ld~~~~~---------------------------------~~a~~~~----g~--~-~~ 281 (406)
T COG1228 245 ---GIKLAIRLGAKSAEHGTLLDHETAA---------------------------------LLAEKGA----GT--P-VP 281 (406)
T ss_pred ---hHHHHHHhCcceehhhhhcCHhHHH---------------------------------HHhhccC----CC--c-cc
Confidence 5555566666665554444332221 1111 1 32 1 00
Q ss_pred eeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcc
Q psy10113 287 ETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNG 366 (596)
Q Consensus 287 e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g 366 (596)
+ |.....+... .........+++.|+.++++||+.+.+....
T Consensus 282 ~----------------l~p~~~~~l~------e~~~~~~~~l~~~GV~vai~TD~~~~~~~~~---------------- 323 (406)
T COG1228 282 V----------------LLPRTKFELR------ELDYKPARKLIDAGVKVAIGTDHNPGTSHGS---------------- 323 (406)
T ss_pred c----------------ccchhhhhhh------cccchhHHHHHHCCCEEEEEcCCCCCchhhH----------------
Confidence 0 0001111110 1122335578999999999999987763111
Q ss_pred hHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCe
Q psy10113 367 VQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGL 446 (596)
Q Consensus 367 ~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~ 446 (596)
+.+....++..+ |+++|+|+.+|.|||++||+..++|+|++||+|||||||.++...+.. +
T Consensus 324 ----l~~~m~l~~~~g-mtp~EaL~a~T~naA~alG~~~~~Gsle~Gk~ADlvv~~~dp~~~i~y--------------~ 384 (406)
T COG1228 324 ----LALEMALAVRLG-MTPEEALKAATINAAKALGLADKVGSLEPGKDADLVVWDGDPLADIPY--------------F 384 (406)
T ss_pred ----HHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCCccccccccCCCccCEEEEcCCChhhccc--------------c
Confidence 122222345566 999999999999999999999999999999999999999996655422 1
Q ss_pred EeeeeEEEEEECCEEEEECCc
Q psy10113 447 VCHGVPEYVIVGGRVCVDEGN 467 (596)
Q Consensus 447 ~~~g~~~~Vi~~GrvV~~dG~ 467 (596)
.....+..||.+|+++++.+.
T Consensus 385 ~~~~~v~~v~k~G~~~~~~~~ 405 (406)
T COG1228 385 LGLNKVEAVIKDGKVVYERGS 405 (406)
T ss_pred ccCCceEEEEECCEEeecCCC
Confidence 112257899999999998763
No 74
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=99.97 E-value=4.6e-29 Score=269.93 Aligned_cols=368 Identities=20% Similarity=0.217 Sum_probs=232.2
Q ss_pred cccEEEEccEEEcCCC--ceeeeEEEECCeEEEeccCCCC----CCCCeEEEcCCCEEeeCccccccCCCc---------
Q psy10113 18 QNRLLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIV----PGGVRVIDAAGSYVIPGGIDPHTHFEL--------- 82 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~--~~~~dV~IedG~I~~Ig~~~~~----~~~~~vIDa~G~~V~PG~ID~HtHl~~--------- 82 (596)
..++++.||+|++.+. .....|+|+||||++||.+.+. .+..++||++|++|||||||+|.|+-.
T Consensus 4 ~adlil~nG~i~T~~~~~p~aeAvaI~dGrI~avG~~~~~~~~~~~~t~viDL~Gk~v~PGfvDaH~Hl~~~G~~~~~~~ 83 (535)
T COG1574 4 AADLILHNGRIYTMDEARPTAEAVAIKDGRIVAVGSDAELKALAGPATEVIDLKGKFVLPGFVDAHLHLISGGLSLLELN 83 (535)
T ss_pred ccceeEECCEEEeccCCCcceeEEEEcCCEEEEEcChHHHHhhcCCCceEEeCCCCEeccccchhhHHHHHhhhhhhccc
Confidence 5689999999999764 4568999999999999985322 247899999999999999999999821
Q ss_pred --------------------------------------------------------ccc-------------------CC
Q psy10113 83 --------------------------------------------------------ELM-------------------GA 87 (596)
Q Consensus 83 --------------------------------------------------------~~~-------------------~~ 87 (596)
|.. +.
T Consensus 84 ~~~~~~~~~~~~~i~~~a~~~~~~~w~~~vG~g~~~~~~~~~~~t~~~lD~~~~~~Pv~l~r~~~H~a~~Ns~aL~~~Gi 163 (535)
T COG1574 84 LDGVRSLDDLLAALRRQAARTPPGQWVVVVGWGWDEQFWEERLPTLAELDAAAPDHPVLLIRLDGHVAVANSAALRLAGI 163 (535)
T ss_pred ccccCCHHHHHHHHHHHHHhCCCCCceEEEEcChhhhccccCCCcHHHhhccCCCCCEEEEeccChHHHHhHHHHHHcCC
Confidence 000 00
Q ss_pred --------------------------------------CCcchHHH-----HHHHHHhCCceEEeccccCCCCccHHHHH
Q psy10113 88 --------------------------------------TSVDDFYH-----GTKAAVAGGTTTIIDFALPRKGESLIKTY 124 (596)
Q Consensus 88 --------------------------------------~~~d~~~~-----g~~~al~~GtTti~D~~~~~~~~~~~~a~ 124 (596)
.+.+..+. +.+.+.+.|+|++.|+...........++
T Consensus 164 ~~~t~~p~gg~~~~d~~g~ptG~L~e~a~~~~~~~~~~~~~~~~~~~~~~~a~~~l~s~GiT~v~d~~~~~~~~~~~~~~ 243 (535)
T COG1574 164 TRDTPDPPGGIIGRDADGEPTGLLLENAQALVARLAPPPSPAEELEAAAARAARELNSLGITGVHDMAGYQGYYADYEAY 243 (535)
T ss_pred CCCCCCCCCCcccccCCCCCCeeehHhhHHHHHHhcCCCCchHHHHHHHHHHHHHHHhcCCeEEEcccccccchhHHHHH
Confidence 00111111 23355689999999987521111222333
Q ss_pred HHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHc------CCCEEEEEee-------------c---C---CCcc
Q psy10113 125 ESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKH------GVNSFKTFMA-------------Y---K---GLYM 179 (596)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~------Gv~~~k~~~~-------------~---~---~~~~ 179 (596)
+..........++.+.++. .... ++........ ....+|.|++ | . |...
T Consensus 244 r~~~~~~~l~~rv~~~l~~--~~~~----~~~~~~~~~~~~~~~~~~g~~K~f~Dgslg~rtA~l~~~y~d~~~~~G~~l 317 (535)
T COG1574 244 RALAAGGELPVRVALLLFT--EDLK----EERLDLLRQTGAKGLLQGGGVKLFADGSLGERTALLAAPYADGPGPSGELL 317 (535)
T ss_pred HHHHhcCcceEEEEeeccc--cchh----hHHHhhcccCCccceeecCceEEEEeCCCCcchhhccCcccCCCCCCCCcc
Confidence 3333332222233333322 1111 1122222111 1223345542 1 1 4457
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEec
Q psy10113 180 LSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHI 259 (596)
Q Consensus 180 ~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv 259 (596)
++.++|.++++.|.++|+++.+||..+..+.... ++.+++..-....+++..+.|+
T Consensus 318 ~~~e~l~~~v~~a~~~gl~v~vHAiGD~Av~~~L------------------------dafE~~~~~~~~~~~r~rieH~ 373 (535)
T COG1574 318 LTEEELEELVRAADERGLPVAVHAIGDGAVDAAL------------------------DAFEKARKKNGLKGLRHRIEHA 373 (535)
T ss_pred cCHHHHHHHHHHHHHCCCcEEEEEechHHHHHHH------------------------HHHHHHhhhcCCccCCceeeee
Confidence 8899999999999999999999998876444322 3333333323234678888898
Q ss_pred CcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEe
Q psy10113 260 MSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTG 339 (596)
Q Consensus 260 ~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~g 339 (596)
.--. .+.|+++++. .+...+.+.++..++ .+..+..-......++|++ .+++.|..++.|
T Consensus 374 ~~v~-~~~i~R~~~L--------gv~~svQP~f~~~~~-~~~~~rlG~~r~~~~~p~~----------~ll~~G~~la~g 433 (535)
T COG1574 374 ELVS-PDQIERFAKL--------GVIASVQPNFLFSDG-EWYVDRLGEERASRSYPFR----------SLLKAGVPLAGG 433 (535)
T ss_pred eecC-HhHHHHHHhc--------CceEeeccccccccc-hHHHHhhhhhhhhccCcHH----------HHHHCCCeEecc
Confidence 7543 3566777766 456667777765554 1111111122333455555 799999999999
Q ss_pred CCC--CCCChhhh---hhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCC
Q psy10113 340 SDN--CTFNKNQK---ELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGS 414 (596)
Q Consensus 340 sD~--~~~~~~~~---~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~ 414 (596)
||. +++++..- +.. .+.+.|... . ....+|.+++|++.|.|+|.+.+.+.++|+|++|+
T Consensus 434 SD~Pv~~~dP~~~i~~AVt----r~~~~g~~~-----------~-~~~~L~~~eAL~~yT~~~A~a~~~e~~~G~Le~G~ 497 (535)
T COG1574 434 SDAPVEPYDPWLGIYAAVT----RKTPGGRVL-----------G-PEERLTREEALRAYTEGGAYASGAEGEKGSLEPGK 497 (535)
T ss_pred CCCCCCCCChHHHHHHHHc----CCCCCCCCC-----------c-cccccCHHHHHHHHhhhhHHhhhccccccccccCc
Confidence 999 45444321 111 011111100 0 01169999999999999999999999999999999
Q ss_pred CccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEEC
Q psy10113 415 DADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE 465 (596)
Q Consensus 415 ~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~d 465 (596)
.|||+|||.| .++++.+.++.. +|+.||++||+||+.
T Consensus 498 ~AD~~Vld~d-~f~~~~~~i~~~-------------~v~~T~~~Gk~VY~~ 534 (535)
T COG1574 498 LADFAVLDRD-PFTVDPDSIKDT-------------KVVLTIVAGKVVYRA 534 (535)
T ss_pred eeeEEEecCC-cccCChHHhccc-------------eEEEEEEcCeEeecC
Confidence 9999999986 666665544433 789999999999974
No 75
>PRK07572 cytosine deaminase; Validated
Probab=99.97 E-value=6.3e-28 Score=260.74 Aligned_cols=362 Identities=17% Similarity=0.193 Sum_probs=209.5
Q ss_pred ccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCcccc-C-----------
Q psy10113 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM-G----------- 86 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~-~----------- 86 (596)
|+++|+|++|+++.. ..+|+|+||+|++|++.... ...++||+.|++|+|||||+|+|+...+. +
T Consensus 2 ~~~~i~~~~i~~~~~--~~~i~i~~g~I~~v~~~~~~-~~~~~id~~g~~~~PG~id~h~h~~~~~~~~~~~~~~~g~l~ 78 (426)
T PRK07572 2 FDLIVRNANLPDGRT--GIDIGIAGGRIAAVEPGLQA-EAAEEIDAAGRLVSPPFVDPHFHMDATLSYGLPRVNASGTLL 78 (426)
T ss_pred CcEEEECeEECCCCe--eEEEEEECCEEEEecCCCCC-CcCceEeCCCCEEcccceehhhCcchhhccCCCCCCCCCCHH
Confidence 568999999998653 57899999999999976432 35689999999999999999999965421 1
Q ss_pred -----------CCCcchHHH----HHHHHHhCCceEEeccccC-CCCccHHHHHHHHHHHhccCceeee---eccccccC
Q psy10113 87 -----------ATSVDDFYH----GTKAAVAGGTTTIIDFALP-RKGESLIKTYESWRQKADEKVCCDY---ALHVGITW 147 (596)
Q Consensus 87 -----------~~~~d~~~~----g~~~al~~GtTti~D~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~---~~~~~~~~ 147 (596)
..+.++++. +++.+++.|||+++|++.. .+.....+++.+.+.... ..+++ .+......
T Consensus 79 e~l~~~~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~~~~~~a~~~~~~~~~--~~~~~~~~a~~~~g~~ 156 (426)
T PRK07572 79 EGIALWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVA--PYLDLQLVAFPQDGVL 156 (426)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCcccHHHHHHHHHHHhh--ccceEEEEeccChhhc
Confidence 134455543 4556788999999998532 222222333334333222 22221 11111111
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCH--HHHHHHHHHHHhcCCeEEEec-CchhhhHHHHHHHHHcCCCCC
Q psy10113 148 WSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSD--GELYDAFSAIKNLGAIAMVHA-ENGEIIDKNTQKLLAAGIKGP 224 (596)
Q Consensus 148 ~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~--~~l~~~~~~a~~~g~~~~vHa-e~~~~i~~~~~~l~~~Gi~~~ 224 (596)
..+...+.++++++ .|+..+... ++....+++ +++..+++.|+++|+++.+|+ +..+.+....+.+
T Consensus 157 ~~~~~~~~~~~~l~-~g~d~iGg~--p~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~-------- 225 (426)
T PRK07572 157 RSPGAVDNLERALD-MGVDVVGGI--PHFERTMADGAESVRLLCEIAAERGLRVDMHCDESDDPLSRHIETL-------- 225 (426)
T ss_pred cCccHHHHHHHHHH-cCCCEEeCC--CCCccccchHHHHHHHHHHHHHHcCCCeEEEECCCCChhHHHHHHH--------
Confidence 12233445666665 477655311 222222334 899999999999999999998 4443222211111
Q ss_pred CcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcH------HHHHHHHHHHHHHhhcCCceee-EEeeccceeecCC
Q psy10113 225 EGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSK------AAGDAMAYKRKELMKKGKHCTL-YGETLAAAVGTHA 297 (596)
Q Consensus 225 ~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~------~~~~~i~~a~~~~~~~G~~~~v-~~e~~~~~l~~~~ 297 (596)
..+..+. . ....+.+.|+.+- ...+.++..++. |. .+ ++......+....
T Consensus 226 ---------------~~~~~~~-G-~~~~v~~~H~~~l~~~~~~~~~~~~~~la~~----g~--~vv~~P~~n~~l~~~~ 282 (426)
T PRK07572 226 ---------------AAETQRL-G-LQGRVAGSHLTSMHSMDNYYVSKLIPLMAEA----GV--NAIANPLINITLQGRH 282 (426)
T ss_pred ---------------HHHHHHh-C-CCCCEEEEccchhhcCCHHHHHHHHHHHHHc----CC--eEEECchhhhhhcCCC
Confidence 0011111 1 1225667777531 223445555555 76 33 2322221111000
Q ss_pred CCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHh
Q psy10113 298 NQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEK 377 (596)
Q Consensus 298 ~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~ 377 (596)
..+ | . ......+.++++.|+.+++|||+.. + .| .++|...+-..+......
T Consensus 283 ~~~-------------~-~---~~g~~~v~~l~~~GV~v~lGtD~~~-~---------~~--~~~~~~~~~e~~~~~~~~ 333 (426)
T PRK07572 283 DTY-------------P-K---RRGMTRVPELMAAGINVAFGHDCVM-D---------PW--YSLGSGDMLEVAHMGLHV 333 (426)
T ss_pred CCC-------------C-C---CCCCcCHHHHHHCCCcEEEecCCCC-C---------CC--CCCCCCCHHHHHHHHHHH
Confidence 001 0 0 1123345689999999999999741 0 01 111111111111111111
Q ss_pred hccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEE
Q psy10113 378 GVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIV 457 (596)
Q Consensus 378 ~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~ 457 (596)
........+.++++++|.|+|++||+++ .| |++|+.||||+||.. +|++.+...+.+..||.
T Consensus 334 ~~~~~~~~l~~~l~~aT~~~A~~lgl~~-~g-i~~G~~ADlvl~d~~----------------~p~e~i~~~~~~~~V~~ 395 (426)
T PRK07572 334 AQMTGQDAMRACFDAVTVNPARIMGLEG-YG-LEPGCNADLVLLQAR----------------DPIEAIRLRAARLAVIR 395 (426)
T ss_pred HcCCCHHHHHHHHHHhhcchHHhhCCCC-cC-CCCCCcCCEEEEeCC----------------CHHHHHHhcCCceEEEE
Confidence 1011112345677899999999999965 67 999999999999953 35555555667899999
Q ss_pred CCEEEEECC
Q psy10113 458 GGRVCVDEG 466 (596)
Q Consensus 458 ~GrvV~~dG 466 (596)
+|++|++..
T Consensus 396 ~G~~v~~~~ 404 (426)
T PRK07572 396 RGKVIARTP 404 (426)
T ss_pred CCEEEeccC
Confidence 999998763
No 76
>PRK09237 dihydroorotase; Provisional
Probab=99.97 E-value=3.2e-28 Score=259.47 Aligned_cols=345 Identities=21% Similarity=0.205 Sum_probs=208.2
Q ss_pred EEEEccEEEcCCC--ceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHH
Q psy10113 21 LLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTK 98 (596)
Q Consensus 21 llIkng~Iv~~d~--~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~ 98 (596)
++|+|++|+|+.. ...++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+...... . + .+..+
T Consensus 1 ~~i~~~~v~d~~~~~~~~~~v~i~~g~I~~v~~~~~~~~~~~~iD~~g~~v~PG~iD~H~H~~~~~~~--~-~--~~~~~ 75 (380)
T PRK09237 1 LLLRGGRVIDPANGIDGVIDIAIEDGKIAAVAGDIDGSQAKKVIDLSGLYVSPGWIDLHVHVYPGSTP--Y-G--DEPDE 75 (380)
T ss_pred CEEEeEEEECCCCCcccceEEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEEeeecCCCCCCc--c-C--CCHHH
Confidence 4799999998644 34589999999999999865544467899999999999999999999743211 1 1 14578
Q ss_pred HHHhCCceEEeccccCCCCccHHHHHHHHHHHh-cc--CceeeeeccccccC--CCh---hHHHHHHHHHHH--cCCCEE
Q psy10113 99 AAVAGGTTTIIDFALPRKGESLIKTYESWRQKA-DE--KVCCDYALHVGITW--WSD---QVQQEMAELCEK--HGVNSF 168 (596)
Q Consensus 99 ~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~-~~--~~~~~~~~~~~~~~--~~~---~~~~e~~~lv~~--~Gv~~~ 168 (596)
+++++||||++|+..+ +....+.+.+..... .. ....++..+..... +.+ -..+++.+++.+ .|+.+|
T Consensus 76 ~~~~~G~Ttv~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gl 153 (380)
T PRK09237 76 VGVRSGVTTVVDAGSA--GADNFDDFRKLTIEASKTRVLAFLNISRIGLLAQDELADLEDIDADAVAEAVKRNPDFIVGI 153 (380)
T ss_pred HHHhCCcCEEEECCCC--CCCCHHHHHHHHHhhhCcEEEEEEeeecccccccchhcCHhHCCHHHHHHHHHhCcCcEEEE
Confidence 8999999999997543 334455555554443 22 34445554433221 111 134566666653 479999
Q ss_pred EEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhc
Q psy10113 169 KTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIAN 248 (596)
Q Consensus 169 k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~ 248 (596)
|.+|.+.-......+.+......+++.|+++.+|+++.....+....+ ..
T Consensus 154 k~~~~~~v~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~l~~~------------------------------l~ 203 (380)
T PRK09237 154 KARMSSSVVGDNGIEPLELAKAIAAEANLPLMVHIGNPPPSLEEILEL------------------------------LR 203 (380)
T ss_pred EEEEecccccccCCchHHHHHHHHHhcCCCEEEEcCCCCCCHHHHHhh------------------------------cc
Confidence 999976522111112333444445689999999997643111111111 11
Q ss_pred ccCCCeEEEecCcHH----------HHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCC
Q psy10113 249 QVDCPLYVVHIMSKA----------AGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRP 318 (596)
Q Consensus 249 ~~~~p~~i~hv~s~~----------~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~ 318 (596)
. + ..+.|+.+.. ..+....+.++ |+ -+ +. .. +...
T Consensus 204 ~-g--~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~~----G~--~~--~i-----g~-g~~~------------------ 248 (380)
T PRK09237 204 P-G--DILTHCFNGKPNRILDEDGELRPSVLEALER----GV--RL--DV-----GH-GTAS------------------ 248 (380)
T ss_pred C-C--CEEEecCCCCCCCccCCCCcchHHHHHHHHC----CE--EE--Ee-----cC-CCCc------------------
Confidence 1 1 1234444321 12333334344 66 21 11 00 0000
Q ss_pred CCCcHHHHHHHHhcCC-ccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhH
Q psy10113 319 DETTPTHLLTLLNENA-LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNA 397 (596)
Q Consensus 319 ~~~~~~~l~~~l~~G~-~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~ 397 (596)
-....+..++..|. ..+++||..+.+.. ++-...+...+.+++. .+++++++++++|.||
T Consensus 249 --~~~~~~~~l~~~g~~~~~l~tD~~~~~~~----------------~~~~~~l~~~~~~~~~-~g~~~~~al~~aT~n~ 309 (380)
T PRK09237 249 --FSFKVAEAAIAAGILPDTISTDIYCRNRI----------------NGPVYSLATVMSKFLA-LGMPLEEVIAAVTKNA 309 (380)
T ss_pred --ccHHHHHHHHHCCCCceEEECCCCCCCcc----------------cchHhHHHHHHHHHHH-hCCCHHHHHHHHHHHH
Confidence 01122335667785 46899997542210 0101123333333333 4699999999999999
Q ss_pred HHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEee---eeEEEEEECCEEEEECC
Q psy10113 398 AKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCH---GVPEYVIVGGRVCVDEG 466 (596)
Q Consensus 398 Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~---g~~~~Vi~~GrvV~~dG 466 (596)
|++||+ +++|+|++|+.|||++||.+... .+. .+++...... ..|..||++||+||.+-
T Consensus 310 A~~lgl-~~~G~l~~G~~ADlvv~~~~~~~-~~~--------~d~~~~~~~~~~~~~~~~~~v~G~~~~~~~ 371 (380)
T PRK09237 310 ADALRL-PELGRLQVGSDADLTLFTLKDGP-FTL--------TDSEGDSLIGERLLTPLATVRGGKVVLTEQ 371 (380)
T ss_pred HHHcCC-CCCCcCCCCCcCCEEEEeCCCCC-ccc--------cCCCCCEEEecCCCcceEEEECCEEEEccC
Confidence 999999 67899999999999999976432 111 1333332222 37899999999999774
No 77
>PRK09230 cytosine deaminase; Provisional
Probab=99.96 E-value=2.1e-27 Score=256.01 Aligned_cols=360 Identities=16% Similarity=0.177 Sum_probs=210.3
Q ss_pred ccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCC-CCCeEEEcCCCEEeeCccccccCCCccccCC----------
Q psy10113 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVP-GGVRVIDAAGSYVIPGGIDPHTHFELELMGA---------- 87 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~-~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~---------- 87 (596)
..++|+|++|+++.. ..+|+|+||+|++|++....+ .+.++||++|++|||||||+|+|+.+.+...
T Consensus 4 ~~~li~~~~~~~~~~--~~~i~i~~g~I~~i~~~~~~~~~~~~~id~~g~~v~PGlid~H~H~~~~~~~~~~~~~~~~~l 81 (426)
T PRK09230 4 ALMTIKNARLPGKEG--LWQITIEDGKISAIEPQSEASLEAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGEPNWNQSGTL 81 (426)
T ss_pred ceEEEECcEEcCCCe--eEEEEEECCEEEEecCCCCCCCCCCceEeCCCCEeccceeEEEEccccceecCCCccCCCCCH
Confidence 468999999988543 369999999999999864322 3568999999999999999999997642211
Q ss_pred -------------CCcchHH----HHHHHHHhCCceEEeccccCC-CCccHHHHHHHHHHHhccCceeeeeccccccC--
Q psy10113 88 -------------TSVDDFY----HGTKAAVAGGTTTIIDFALPR-KGESLIKTYESWRQKADEKVCCDYALHVGITW-- 147 (596)
Q Consensus 88 -------------~~~d~~~----~g~~~al~~GtTti~D~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-- 147 (596)
.+.++++ .+...+++.|||++.+++.+. ......+++.+..+... ...+.++......
T Consensus 82 ~~~i~~~~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~~~~~~~a~~~~~~~~~--~~~~~~i~a~~~~~~ 159 (426)
T PRK09230 82 FEGIERWAERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVA--PWVDLQIVAFPQEGI 159 (426)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCcchhHHHHHHHHHHHhh--CcceEEEEeccCccc
Confidence 2334443 345566889999999997652 21112233322222221 1122222111100
Q ss_pred CC-hhHHHHHHHHHHHcCCCEEEEEeecCCCcc--CCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCC
Q psy10113 148 WS-DQVQQEMAELCEKHGVNSFKTFMAYKGLYM--LSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGP 224 (596)
Q Consensus 148 ~~-~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~--~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~ 224 (596)
+. +...+.+++..+ .+...+. ..++..+. .+.+.+.++++.|+++|+++.+|+.+...... +
T Consensus 160 ~~~~~~~~~l~~a~~-~~~~~vg--~~p~~~~~~~~~~e~l~~~~~~A~~~g~~~~~H~~E~~~~~~---~--------- 224 (426)
T PRK09230 160 LSYPNGEALLEEALR-LGADVVG--AIPHFEFTREYGVESLHKAFALAQKYDRLIDVHCDEIDDEQS---R--------- 224 (426)
T ss_pred cCCccHHHHHHHHHH-cCCCEEe--CCCCccccchhHHHHHHHHHHHHHHhCCCcEEEECCCCCcch---H---------
Confidence 11 122223333333 2443222 12222222 25678999999999999999999754321110 0
Q ss_pred CcccCCChHHHHHHHHHHHHHHhcc--cCCCeEEEecCcHH------HHHHHHHHHHHHhhcCCceeeEEeeccceeecC
Q psy10113 225 EGHQLSRPEEVEAEAVTRACTIANQ--VDCPLYVVHIMSKA------AGDAMAYKRKELMKKGKHCTLYGETLAAAVGTH 296 (596)
Q Consensus 225 ~~~~~~~p~~~e~~a~~~~i~la~~--~~~p~~i~hv~s~~------~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~ 296 (596)
.....+.+... .+-++.+.|+..-. ..+.++..++. |+. .+++......|...
T Consensus 225 --------------~~~~~~~~~~~~gl~~~v~~~H~~~l~~~~~~~~~~~~~~La~~----gv~-vv~cP~sn~~l~~~ 285 (426)
T PRK09230 225 --------------FVETVAALAHREGMGARVTASHTTAMHSYNGAYTSRLFRLLKMS----GIN-FVANPLVNIHLQGR 285 (426)
T ss_pred --------------HHHHHHHHHHHhCCCCCEEEEecCchhcCCHHHHHHHHHHHHHc----CCe-EEECcchhhhhcCC
Confidence 00011112222 34567888887652 45567777776 871 34444444444211
Q ss_pred CCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHH-
Q psy10113 297 ANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIW- 375 (596)
Q Consensus 297 ~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~- 375 (596)
...+ |.+ .....+.+++++|+.+++|||+.. + .| .|.|...+-..+...+
T Consensus 286 ~~~~--------------p~~---~g~~pi~~l~~aGv~V~lGTD~~~-d---------~~--~~~~~~d~~~~~~~~~~ 336 (426)
T PRK09230 286 FDTY--------------PKR---RGITRVKEMLEAGINVCFGHDDVF-D---------PW--YPLGTANMLQVLHMGLH 336 (426)
T ss_pred CCCC--------------CCC---CCCcCHHHHHHCCCeEEEecCCCC-C---------CC--cCCCCCCHHHHHHHHHH
Confidence 1110 110 112235589999999999999732 1 12 2233333322222221
Q ss_pred -HhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEE
Q psy10113 376 -EKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEY 454 (596)
Q Consensus 376 -~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~ 454 (596)
.++.... ++.++++|+|.|+|++||+.+ .| |++|+.||||+||.+.+..+.. ....+..
T Consensus 337 ~~~~~~~~--~~~~~l~maT~~gA~alg~~~-~g-le~G~~ADlv~~~~~~~~~~~~----------------~~~~~~~ 396 (426)
T PRK09230 337 VCQLMGYG--QINDGLNLITTHSARTLNLQD-YG-IEVGNPANLIILPAENGFDAVR----------------RQVPVRY 396 (426)
T ss_pred HHhhCChh--hHHHHHHHHhcchhHHhCCCC-cC-CCCCCcCCEEEEeCCCHHHHHh----------------ccCCceE
Confidence 2111111 368999999999999999965 78 9999999999999764433321 1235689
Q ss_pred EEECCEEEEEC
Q psy10113 455 VIVGGRVCVDE 465 (596)
Q Consensus 455 Vi~~GrvV~~d 465 (596)
|+++|++|+..
T Consensus 397 v~~~G~~v~~~ 407 (426)
T PRK09230 397 SIRHGKVIAET 407 (426)
T ss_pred EEECCEEEecc
Confidence 99999999865
No 78
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=99.96 E-value=2.3e-27 Score=256.46 Aligned_cols=355 Identities=17% Similarity=0.102 Sum_probs=208.0
Q ss_pred eeeEEEECCeEEEeccCCC----CCCCCeEEEcCCCEEeeCccccccCCCcccc-CC---------------------CC
Q psy10113 36 DLDIYIENGVIQQLGRNLI----VPGGVRVIDAAGSYVIPGGIDPHTHFELELM-GA---------------------TS 89 (596)
Q Consensus 36 ~~dV~IedG~I~~Ig~~~~----~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~-~~---------------------~~ 89 (596)
+++|+|+||+|++||+... .+.+.++||++|++|||||||+|+|+.+... +. .+
T Consensus 26 ~g~V~v~~g~I~~vG~~~~~~~~~~~~~~viD~~g~~v~PGlVn~H~Hl~~~~~rg~~~~~~l~~wl~~~~~~~e~~~~~ 105 (429)
T cd01303 26 DGLIVVVDGNIIAAGAAETLKRAAKPGARVIDSPNQFILPGFIDTHIHAPQYANIGSGLGEPLLDWLETYTFPEEAKFAD 105 (429)
T ss_pred CeEEEEECCEEEEeCchhhhhhhcCCCceEEcCCCCEEecceeeeeecccccccccccCCCcHHHHHHhhhhHHHHhcCC
Confidence 6899999999999997432 2346789999999999999999999854321 10 11
Q ss_pred cchHH----HHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc-cccC-CCh---hHHHHHHHHH
Q psy10113 90 VDDFY----HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV-GITW-WSD---QVQQEMAELC 160 (596)
Q Consensus 90 ~d~~~----~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~-~~~---~~~~e~~~lv 160 (596)
.++.+ .+...+++.||||+.|+..... ......++...+.. .+...-+.... ..+. +.. +..++..+++
T Consensus 106 ~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~-~~~~~~~~a~~~~G-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 183 (429)
T cd01303 106 PAYAREVYGRFLDELLRNGTTTACYFATIHP-ESTEALFEEAAKRG-QRAIAGKVCMDRNAPEYYRDTAESSYRDTKRLI 183 (429)
T ss_pred HHHHHHHHHHHHHHHHhCCceEEEeecccCh-hHHHHHHHHHHHhC-CeEEEeeeeecCCCCcccccCHHHHHHHHHHHH
Confidence 22222 2345668999999998864321 12222223222222 12222222111 1111 111 1223333443
Q ss_pred HH-cCC-CEEEEEeecCCCccCCHHHHHHHHHHHHhcC-CeEEEecCchhhhHHHHHHHHH-cCCCCCCcccCCChHHHH
Q psy10113 161 EK-HGV-NSFKTFMAYKGLYMLSDGELYDAFSAIKNLG-AIAMVHAENGEIIDKNTQKLLA-AGIKGPEGHQLSRPEEVE 236 (596)
Q Consensus 161 ~~-~Gv-~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g-~~~~vHae~~~~i~~~~~~l~~-~Gi~~~~~~~~~~p~~~e 236 (596)
+. .+. ..+...++++..+.++++.+.++++.|+++| .++++|+.+... ....+.+ .|- ..+|-
T Consensus 184 ~~~~~~~~~v~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~---e~~~~~~~~g~-------~~~p~--- 250 (429)
T cd01303 184 ERWHGKSGRVKPAITPRFAPSCSEELLAALGKLAKEHPDLHIQTHISENLD---EIAWVKELFPG-------ARDYL--- 250 (429)
T ss_pred HHHhCcCCceEEEEecCcCCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHH---HHHHHHHHcCC-------CCCHH---
Confidence 32 221 3466677788888899999999999999999 999999854321 1111111 110 00111
Q ss_pred HHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeE-EeeccceeecCCCCCCCccccccccccCCC
Q psy10113 237 AEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLY-GETLAAAVGTHANQIPCTWHDQAAHVLSPP 315 (596)
Q Consensus 237 ~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~-~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pp 315 (596)
+ .+.-....+.++.+.|+..-.. +.++.+++. |+ .+. +......+. ...+|
T Consensus 251 -~----~l~~~G~l~~~~~l~H~~~l~~-~~~~~l~~~----g~--~v~~~P~sn~~l~----------------~g~~~ 302 (429)
T cd01303 251 -D----VYDKYGLLTEKTVLAHCVHLSE-EEFNLLKER----GA--SVAHCPTSNLFLG----------------SGLFD 302 (429)
T ss_pred -H----HHHHCCCCCCCcEEEeCCCCCH-HHHHHHHHc----CC--EEEECccchhhhc----------------cCCCC
Confidence 1 1111223355677788775432 345556666 76 432 332211110 01223
Q ss_pred CCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhc-----cCCCCCHHHHH
Q psy10113 316 LRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGV-----VPGILSPEKFV 390 (596)
Q Consensus 316 lr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v-----~~~~l~~~e~v 390 (596)
+.++++.|+.+++|||....+.. .+ |. ++++...+.+.. ....+++.+++
T Consensus 303 ----------~~~~~~~Gv~v~lGtD~~~~~~~-d~-----~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~al 357 (429)
T cd01303 303 ----------VRKLLDAGIKVGLGTDVGGGTSF-SM-----LD---------TLRQAYKVSRLLGYELGGHAKLSPAEAF 357 (429)
T ss_pred ----------HHHHHHCCCeEEEeccCCCCCCc-cH-----HH---------HHHHHHHHHHhhccccCCcCCCCHHHHH
Confidence 33789999999999998543211 11 11 334444333322 23458999999
Q ss_pred HHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceee-cCCCccCCCCCCcccCeEeee---eEEEEEECC
Q psy10113 391 AVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTI-SAKTHAHACDYNIFEGLVCHG---VPEYVIVGG 459 (596)
Q Consensus 391 ~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i-~~~~~~~~~~~~~~~g~~~~g---~~~~Vi~~G 459 (596)
+++|.|+|+++|+++++|+|++||.||||++|.+.+... +..+.. ...++|+..+.+.+ .|..||++|
T Consensus 358 ~~aT~~gA~~lg~~~~~Gsle~Gk~ADlvvld~~~~~~~~p~~~~~-~~~~d~~~~lV~~~~~~~V~~v~V~G 429 (429)
T cd01303 358 YLATLGGAEALGLDDKIGNFEVGKEFDAVVIDPSATPLLADRMFRV-ESLEEALFKFLYLGDDRNIREVYVAG 429 (429)
T ss_pred HHHhhHHHHHcCCCCCCcCcCCCCccCEEEEcCCCccccccccccc-cchhhHHHHHeeeCCCCCeeEEEeCC
Confidence 999999999999988899999999999999998864222 210000 00136766666666 488999998
No 79
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=99.96 E-value=9.3e-28 Score=261.16 Aligned_cols=366 Identities=15% Similarity=0.144 Sum_probs=209.6
Q ss_pred EEEccEEEcCCCceeeeEEEE-CCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCcccc---------------
Q psy10113 22 LIKNGKVVNADKISDLDIYIE-NGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM--------------- 85 (596)
Q Consensus 22 lIkng~Iv~~d~~~~~dV~Ie-dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~--------------- 85 (596)
.++|+++-++ ....++|+|+ ||+|++||+....+++ ++..|++|||||||+|+|+.+.+.
T Consensus 5 ~~~~~~~~~~-~~~~~~i~I~~~g~I~~vg~~~~~~~~---~~~~g~lvlPGfVn~H~H~~~~~~rg~~~~~~~~~~~l~ 80 (455)
T TIGR02022 5 WAERALLPDG-WAEGVRIAVAADGRILAIETGVPAAPG---AERLSGPLLPGLANLHSHAFQRAMAGLAEVAGSGGDSFW 80 (455)
T ss_pred hHHhccCCCc-cccCceEEEecCCEEEEecCCCCcccc---cccCCCEEccCCcccCcchhhHhhcCCcccccCCCCCHH
Confidence 4566666443 2346899999 9999999986543222 335689999999999999854311
Q ss_pred ----------CCCCcchHHH----HHHHHHhCCceEEeccccCCC---C-------ccHHHHHHHHHHHhccCceeeeec
Q psy10113 86 ----------GATSVDDFYH----GTKAAVAGGTTTIIDFALPRK---G-------ESLIKTYESWRQKADEKVCCDYAL 141 (596)
Q Consensus 86 ----------~~~~~d~~~~----g~~~al~~GtTti~D~~~~~~---~-------~~~~~a~~~~~~~~~~~~~~~~~~ 141 (596)
...+.++++. ++..++++||||+.|+..... + ......++...+. +.++.++.
T Consensus 81 ~w~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~---G~R~~~~~ 157 (455)
T TIGR02022 81 TWRELMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFHYLHHAPDGTPYADPAEMAERIAAAAADA---GIGLTLLP 157 (455)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeeeeecccCCCccccchhhhHHHHHHHHHHh---CCeEEeee
Confidence 1234455544 344568899999999753211 1 0012222222222 22222211
Q ss_pred ----ccc---ccCC--------C-hhHHHHHHHHHHH-cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecC
Q psy10113 142 ----HVG---ITWW--------S-DQVQQEMAELCEK-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAE 204 (596)
Q Consensus 142 ----~~~---~~~~--------~-~~~~~e~~~lv~~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae 204 (596)
+.. .+.+ . +...+..+.+.+. .+...+...++++..+.++++.+.++++ ++++|+++++|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~-a~~~g~~v~~H~~ 236 (455)
T TIGR02022 158 VFYAHSGFGGAAPNPGQRRFIHDVERFARLVEVLRRELAAQPAAVLGLAPHSLRAVTPEQLAAVLQ-ASDRQAPVHIHVA 236 (455)
T ss_pred eeeecCCCCCCCCcccchhhccCHHHHHHHHHHHHHHhccCCceEEEEecCCCCcCCHHHHHHHHH-HHhCCCceEEEEC
Confidence 110 1111 0 1122222333221 1223456667778877899999999999 8899999999985
Q ss_pred chhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceee
Q psy10113 205 NGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTL 284 (596)
Q Consensus 205 ~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v 284 (596)
+.. .+........|.. | .+.+ .-....+-++.+.|+..-.. +.++..++. |. .+
T Consensus 237 e~~--~e~~~~~~~~G~~---------~----v~~l----~~~g~l~~~~~~~H~~~l~~-~d~~~la~~----g~--~v 290 (455)
T TIGR02022 237 EQQ--KEVDDCLAWSGRR---------P----VEWL----LDHGPVDARWCLVHATHLTD-EETALLARS----GA--VA 290 (455)
T ss_pred CCh--HHHHHHHHHhCCC---------H----HHHH----HHcCCCCCCEEEEEeecCCH-HHHHHHHHc----CC--eE
Confidence 321 1111111112321 1 1111 11123455666677664332 234555555 76 32
Q ss_pred -EEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCC
Q psy10113 285 -YGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNG 363 (596)
Q Consensus 285 -~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G 363 (596)
++......++ ...+|+ .++++.|+.+++|||....... |.
T Consensus 291 ~~~P~sn~~lg----------------~g~~pi----------~~l~~~Gv~v~lGTD~~~~~d~--------~~----- 331 (455)
T TIGR02022 291 GLCPTTEANLG----------------DGIFPA----------VDFVAAGGRFGIGSDSHVVIDV--------AE----- 331 (455)
T ss_pred EEChhhhcccc----------------CCCCCH----------HHHHHCCCeEEEECCCCCCCCH--------HH-----
Confidence 2322211110 012333 3799999999999996332111 11
Q ss_pred CcchHHHHHHHHHhhc---------cCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCc
Q psy10113 364 VNGVQDRLSVIWEKGV---------VPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTH 434 (596)
Q Consensus 364 ~~g~e~~~~~~~~~~v---------~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~ 434 (596)
++++....++.. ....++.+++++++|.|+|++||+ + .|+|++||.|||||||.+.+...+..
T Consensus 332 ----~m~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~-~-~GsLe~Gk~ADlvvld~~~~~~~~~~-- 403 (455)
T TIGR02022 332 ----ELRQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGL-A-TGGLRAGARADFLTLDGDHPYLAGAL-- 403 (455)
T ss_pred ----HHHHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCC-C-CCccCCCCCcCEEEEeCCCcccCCCC--
Confidence 344443333321 123567889999999999999999 3 89999999999999998855443310
Q ss_pred cCCCCCCcccCeEee---eeEEEEEECCEEEEECCceeecC
Q psy10113 435 AHACDYNIFEGLVCH---GVPEYVIVGGRVCVDEGNLRVAQ 472 (596)
Q Consensus 435 ~~~~~~~~~~g~~~~---g~~~~Vi~~GrvV~~dG~~~~~~ 472 (596)
..+|+..+.+. ..|..||++||+|++||+++..+
T Consensus 404 ----~~~~~~~lv~~~~~~~V~~v~V~G~~v~~~g~~~~~~ 440 (455)
T TIGR02022 404 ----GDSLLDRWLFAGGGAAVRDVWVGGRWVVRDGRHALRE 440 (455)
T ss_pred ----chhHHHHHhhcCCCCCccEEEECCEEEEECCccccHH
Confidence 01233323322 36899999999999999996443
No 80
>PRK07213 chlorohydrolase; Provisional
Probab=99.96 E-value=4.6e-27 Score=249.85 Aligned_cols=338 Identities=20% Similarity=0.256 Sum_probs=203.3
Q ss_pred EEEEccEEEcCCC--ceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCcccc-------------
Q psy10113 21 LLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM------------- 85 (596)
Q Consensus 21 llIkng~Iv~~d~--~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~------------- 85 (596)
++|+|++|++++. ..+++|+|+||+|.+|++.. .+.++||++|++| |||||+|+|+.....
T Consensus 2 ~li~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~---~~~~~id~~g~~v-PGlvd~H~H~~~~~~rg~~~~~~l~~~~ 77 (375)
T PRK07213 2 LVYLNGNFLYGEDFEPKKGNLVIEDGIIKGFTNEV---HEGNVIDAKGLVI-PPLINAHTHIGDSSIKDIGIGKSLDELV 77 (375)
T ss_pred EEEEeeEEEeCCCCceeeeEEEEECCEEEEeccCC---CCCeEEeCCCCEe-cceeeeccccCchhhhcCCCCCCHHHHc
Confidence 7899999998754 35789999999999999752 3568999999999 999999999965321
Q ss_pred -----------CCCCcchHHH----HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceee-eeccccccCCC
Q psy10113 86 -----------GATSVDDFYH----GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCD-YALHVGITWWS 149 (596)
Q Consensus 86 -----------~~~~~d~~~~----g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~ 149 (596)
...+.++++. ++..+++.||||+.|+.. .+....+++.+... ....+.. .+... ....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~--~~~~~~~~~~~a~~--~~~~r~~~~~~~~--~~~~ 151 (375)
T PRK07213 78 KPPNGLKHKFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFRE--GGIKGINLLKKASS--DLPIKPIILGRPT--EADE 151 (375)
T ss_pred cCCCcchHHHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhh--cChhHHHHHHHHHH--cCCCceEEecCCC--cccc
Confidence 0123344443 344568899999999732 22122222222211 1111111 11110 1111
Q ss_pred hhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccC
Q psy10113 150 DQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQL 229 (596)
Q Consensus 150 ~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~ 229 (596)
+...+.++.+++. ... ++.++...++++++.++++.|+++|+++++|+.+...-. .......|..
T Consensus 152 ~~~~~~~~~~~~~--~~g----~~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e~--~~~~~~~G~~------- 216 (375)
T PRK07213 152 NELKKEIREILKN--SDG----IGLSGANEYSDEELKFICKECKREKKIFSIHAAEHKGSV--EYSLEKYGMT------- 216 (375)
T ss_pred hhhHHHHHHHHHh--ccc----ccccccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhHH--HHHHHHcCCC-------
Confidence 2233333333321 111 234455678899999999999999999999985432111 1111112211
Q ss_pred CChHHHHHHHHHHHHHHhcccCC-CeEEEecCcHHHHHHHHHHHHHHhhcCCceee-EEeeccceeecCCCCCCCccccc
Q psy10113 230 SRPEEVEAEAVTRACTIANQVDC-PLYVVHIMSKAAGDAMAYKRKELMKKGKHCTL-YGETLAAAVGTHANQIPCTWHDQ 307 (596)
Q Consensus 230 ~~p~~~e~~a~~~~i~la~~~~~-p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v-~~e~~~~~l~~~~~~~~~~~~~~ 307 (596)
.+.++.. .++ |-.+.|+..... +.++..++. |. .+ ++......+.
T Consensus 217 ---------~v~~~~~----~G~~~~~i~H~~~~~~-~~i~~la~~----g~--~v~~~P~sn~~l~------------- 263 (375)
T PRK07213 217 ---------EIERLIN----LGFKPDFIVHATHPSN-DDLELLKEN----NI--PVVVCPRANASFN------------- 263 (375)
T ss_pred ---------hHHHHHh----cCCCCCEEEECCCCCH-HHHHHHHHc----CC--cEEECCcchhhhc-------------
Confidence 1112222 222 113567664332 235555555 76 33 2333222210
Q ss_pred cccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHH
Q psy10113 308 AAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPE 387 (596)
Q Consensus 308 ~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~ 387 (596)
...+| +.++++.|+.+++|||..+++.. .++ -|+++.. ...++++.
T Consensus 264 ---~g~~~----------v~~l~~~Gv~v~lGTD~~~~~~~-~~~--------------~e~~~~~------~~~~~~~~ 309 (375)
T PRK07213 264 ---VGLPP----------LNEMLEKGILLGIGTDNFMANSP-SIF--------------REMEFIY------KLYHIEPK 309 (375)
T ss_pred ---cCCcc----------HHHHHHCCCEEEEeeCCCCCchH-hHH--------------HHHHHHH------HHhCcCHH
Confidence 01123 34799999999999998654321 111 0333321 12368999
Q ss_pred HHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeee---eEEEEEECCEE
Q psy10113 388 KFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG---VPEYVIVGGRV 461 (596)
Q Consensus 388 e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g---~~~~Vi~~Grv 461 (596)
++++++|.|+|++||+. +.|+|++|+.||||+||.+... ...||+..+...+ .|..||++||+
T Consensus 310 ~~l~~aT~~gA~~lg~~-~~G~l~~G~~ADlvv~d~~~~~----------p~~dp~~~lV~~~~~~~v~~v~v~G~~ 375 (375)
T PRK07213 310 EILKMATINGAKILGLI-NVGLIEEGFKADFTFIKPTNIK----------FSKNPYASIITRCESGDIVNKILKGKL 375 (375)
T ss_pred HHHHHHHHHHHHHhCCC-CcCCcCCCCcccEEEEcCcccc----------ccCCchHHHhhhccCCCceEEEECCcC
Confidence 99999999999999995 5899999999999999975211 2256777776654 68999999984
No 81
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=99.96 E-value=2.5e-27 Score=258.25 Aligned_cols=365 Identities=16% Similarity=0.139 Sum_probs=209.3
Q ss_pred cEEEEccEEEcCCCceeeeEEEEC-CeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCcccc-------------
Q psy10113 20 RLLIKNGKVVNADKISDLDIYIEN-GVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM------------- 85 (596)
Q Consensus 20 ~llIkng~Iv~~d~~~~~dV~Ied-G~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~------------- 85 (596)
.|+++++.+.++ ...+++|+|+| |+|++||+... ++ .++..|++|||||||+|+|+.+..+
T Consensus 4 ~~~~~~~~~~~~-~~~~~~v~i~~~grI~~vg~~~~-~~---~~~~~g~~vlPGlVn~H~H~~~~~~rg~~~~~~~~~~~ 78 (456)
T PRK09229 4 TLFAERALLPDG-WARNVRLTVDADGRIAAVEPGAA-PA---GAERLAGPVLPGMPNLHSHAFQRAMAGLTEVRGPPQDS 78 (456)
T ss_pred hHHHHHhhCCCc-cccCcEEEEecCCeEEEecCCCC-Cc---cccccCcEEccCcccccccHhhHhhcCcccccCCCCCC
Confidence 456667766554 34578999999 99999998543 21 3456999999999999999853211
Q ss_pred ------------CCCCcchHHH----HHHHHHhCCceEEeccccCC--CC-c------cH-HHHHHHHHHHhccCceeee
Q psy10113 86 ------------GATSVDDFYH----GTKAAVAGGTTTIIDFALPR--KG-E------SL-IKTYESWRQKADEKVCCDY 139 (596)
Q Consensus 86 ------------~~~~~d~~~~----g~~~al~~GtTti~D~~~~~--~~-~------~~-~~a~~~~~~~~~~~~~~~~ 139 (596)
...++++.+. ++..+|++||||+.|+.... .+ . .. ...++...+.. .+..+-.
T Consensus 79 l~~w~~~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~G-iR~~~~~ 157 (456)
T PRK09229 79 FWSWRELMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFHYLHHDPDGTPYADPAEMALRIVAAARAAG-IGLTLLP 157 (456)
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeeeeeccCCCCCccCChHHHHHHHHHHHHHcC-CEEEece
Confidence 1123333333 44466889999999985321 11 0 11 12222222221 1111111
Q ss_pred ec--ccc---ccCC------C---hhHHHHHHHHHHH-cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecC
Q psy10113 140 AL--HVG---ITWW------S---DQVQQEMAELCEK-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAE 204 (596)
Q Consensus 140 ~~--~~~---~~~~------~---~~~~~e~~~lv~~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae 204 (596)
.+ +.+ .+.+ . +...+.++.+.+. .+...+...++++..+.++++++.++++.| ++|+++++|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~~A-~~g~~i~~H~~ 236 (456)
T PRK09229 158 VLYAHSGFGGQPPNPGQRRFINDPDGFLRLLEALRRALAALPGARLGLAPHSLRAVTPDQLAAVLALA-APDGPVHIHIA 236 (456)
T ss_pred eeeecCCCCCCCCchhhcccccCHHHHHHHHHHHHHhhcCCCceEEEEeCCCCCCCCHHHHHHHHHHh-cCCCceEEEeC
Confidence 01 100 0111 0 1122223333321 223346677788888889999999999999 99999999984
Q ss_pred c-hhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCcee
Q psy10113 205 N-GEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCT 283 (596)
Q Consensus 205 ~-~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~ 283 (596)
+ ...+....+ ..|.. |- +.+.+ ....+-++.+.|+..-.. +.++..++. |. .
T Consensus 237 e~~~e~~~~~~---~~g~~---------~~----~~l~~----~g~l~~~~~l~H~~~l~~-~d~~~la~~----g~--~ 289 (456)
T PRK09229 237 EQTKEVDDCLA---WSGAR---------PV----EWLLD----HAPVDARWCLVHATHLTD-AETARLARS----GA--V 289 (456)
T ss_pred CCHHHHHHHHH---HcCCC---------HH----HHHHH----cCCCCCCeEEEeeccCCH-HHHHHHHHc----CC--e
Confidence 3 222111111 12221 11 11111 223455667777764332 234555555 76 3
Q ss_pred eE-EeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCC
Q psy10113 284 LY-GETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPN 362 (596)
Q Consensus 284 v~-~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~ 362 (596)
+. +......++ ...+|+ .++++.|+.+++|||....... |.
T Consensus 290 v~~~P~sn~~lg----------------~g~~p~----------~~l~~~Gv~v~lGtD~~~~~d~--------~~---- 331 (456)
T PRK09229 290 AGLCPTTEANLG----------------DGIFPA----------VDYLAAGGRFGIGSDSHVSIDL--------VE---- 331 (456)
T ss_pred EEECchhhhhhc----------------CCCCCH----------HHHHHCCCeEEEecCCCCCCCH--------HH----
Confidence 32 222111100 112333 3789999999999996431111 11
Q ss_pred CCcchHHHHHHHHHhhcc---------CCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCC
Q psy10113 363 GVNGVQDRLSVIWEKGVV---------PGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKT 433 (596)
Q Consensus 363 G~~g~e~~~~~~~~~~v~---------~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~ 433 (596)
+.++....++... ...++..++++++|.|+|+++|+ .+|+|++||.|||||+|.+.+...+.
T Consensus 332 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~--~~GsLe~Gk~ADlvvld~~~~~~~~~-- 402 (456)
T PRK09229 332 -----ELRLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGR--AIGGLAVGARADLVVLDLDHPALAGR-- 402 (456)
T ss_pred -----HHHHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCC--CcCCcCCCCccCEEEEeCCCccccCC--
Confidence 3333333322211 13568899999999999999999 58999999999999999886432211
Q ss_pred ccCCCCCCcccCeEee---eeEEEEEECCEEEEECCcee
Q psy10113 434 HAHACDYNIFEGLVCH---GVPEYVIVGGRVCVDEGNLR 469 (596)
Q Consensus 434 ~~~~~~~~~~~g~~~~---g~~~~Vi~~GrvV~~dG~~~ 469 (596)
...+|+..+.+. ..|..||++||+||++|++.
T Consensus 403 ----~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~~g~~~ 437 (456)
T PRK09229 403 ----EGDALLDRWVFAGGDAAVRDVWVAGRWVVRDGRHR 437 (456)
T ss_pred ----ChhhHHHHHhhcCCCCCeeEEEECCEEEEECCccC
Confidence 012333333322 37899999999999999753
No 82
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.96 E-value=8.8e-28 Score=255.03 Aligned_cols=334 Identities=19% Similarity=0.207 Sum_probs=212.7
Q ss_pred EEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccc-cCCCCcchHHHHHHH
Q psy10113 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELEL-MGATSVDDFYHGTKA 99 (596)
Q Consensus 21 llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~-~~~~~~d~~~~g~~~ 99 (596)
++|+|++|+++......+|+|+||+|++|++....+.+.++||++|++|+|||||+|+|..... ......+++...+++
T Consensus 1 ~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~vid~~g~~l~PG~iD~H~H~~~g~~~~~~~~e~~~~~~~~ 80 (374)
T cd00854 1 LIIKNARILTPGGLEDGAVLVEDGKIVAIGPEDELEEADEIIDLKGQYLVPGFIDIHIHGGGGADFMDGTAEALKTIAEA 80 (374)
T ss_pred CEEEeEEEeCCCEEcccEEEEECCEEEEecCCCCcccCCcEEECCCCEecccEEEeeecccCCCCCCCCCHHHHHHHHHH
Confidence 4799999999854557899999999999998654444568999999999999999999985422 122346888999999
Q ss_pred HHhCCceEEeccccCCCCccHHHHHHHHHHHhccC-ceeeeeccccccCCChh-------------HHHHHHHHHHHcCC
Q psy10113 100 AVAGGTTTIIDFALPRKGESLIKTYESWRQKADEK-VCCDYALHVGITWWSDQ-------------VQQEMAELCEKHGV 165 (596)
Q Consensus 100 al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------------~~~e~~~lv~~~Gv 165 (596)
++++||||++++..+.+.+.+.+.+..+++....+ ....+++|+.+++++.. ..+++++++.. +.
T Consensus 81 ~~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~g~~~~g~hleGP~~~~~~~g~h~~~~~~~~~~~~~~~~~~~-~~ 159 (374)
T cd00854 81 LAKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQGAEILGIHLEGPFISPEKKGAHPPEYLRAPDPEELKKWLEA-AG 159 (374)
T ss_pred HHccCcceeeccccCCCHHHHHHHHHHHHHHhhcCCCCeeEEEeeecCccCcccCCCCCHHHcCCcCHHHHHHHHHh-cC
Confidence 99999999999987777777888888887766544 46788899988877543 22466666654 44
Q ss_pred CEEEEEeecCCCccCCHHHH--HHHHHHHHhcCCeEE-EecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHH
Q psy10113 166 NSFKTFMAYKGLYMLSDGEL--YDAFSAIKNLGAIAM-VHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTR 242 (596)
Q Consensus 166 ~~~k~~~~~~~~~~~~~~~l--~~~~~~a~~~g~~~~-vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~ 242 (596)
..+|++ .+.+|.. .++++.++++|+.+. .|.... ....+...+.|+...+|.....+.....+.
T Consensus 160 ~~ik~~-------tlaPE~~~~~~~i~~~~~~gi~v~~GH~~a~---~~~~~~a~~~G~~~~tH~~n~m~~~~~r~~--- 226 (374)
T cd00854 160 GLIKLV-------TLAPELDGALELIRYLVERGIIVSIGHSDAT---YEQAVAAFEAGATHVTHLFNAMSPLHHREP--- 226 (374)
T ss_pred CCEEEE-------EECCCCCChHHHHHHHHHCCeEEEeeCCcCC---HHHHHHHHHcCCCeeeECCCCCCCcCCCCC---
Confidence 667765 2344544 788999999999995 886532 224455556666655443222111100000
Q ss_pred HHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCc
Q psy10113 243 ACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETT 322 (596)
Q Consensus 243 ~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~ 322 (596)
..+..+-. .- .+++| +..|+.|..+.
T Consensus 227 -----------------------~~~~a~l~-----~~--~~~~~-----li~dg~Hv~~~------------------- 252 (374)
T cd00854 227 -----------------------GVVGAALS-----DD--DVYAE-----LIADGIHVHPA------------------- 252 (374)
T ss_pred -----------------------cHHHHhhc-----CC--CCeEE-----EEcCCCcCCHH-------------------
Confidence 00000000 00 12222 33344443221
Q ss_pred HHHHHHHHhc-C-CccEEeCCCCCCCh---hh-hhhC-----CCCCCcCCCC-CcchHHHHHHHHHhhccCCCCCHHHHH
Q psy10113 323 PTHLLTLLNE-N-ALQTTGSDNCTFNK---NQ-KELG-----KDSFTHIPNG-VNGVQDRLSVIWEKGVVPGILSPEKFV 390 (596)
Q Consensus 323 ~~~l~~~l~~-G-~~~~~gsD~~~~~~---~~-~~~g-----~~~f~~~p~G-~~g~e~~~~~~~~~~v~~~~l~~~e~v 390 (596)
.+..+.+. | ..+++.||...... .. ...+ .+....+..| ..|....|...+..++..+++++.+++
T Consensus 253 --~~~~~~r~~g~~~~~lvtD~~~~~G~~~g~y~~~~~~~~~~~~~~~~~~g~laG~~~~l~~~~~~l~~~~~l~~~~al 330 (374)
T cd00854 253 --AVRLAYRAKGADKIVLVTDAMAAAGLPDGEYELGGQTVTVKDGVARLADGTLAGSTLTMDQAVRNMVKWGGCPLEEAV 330 (374)
T ss_pred --HHHHHHHhcCCCcEEEEeccccccCCCCCeEEECCEEEEEECCEEEcCCCCeeehHhhHHHHHHHHHHhhCCCHHHHH
Confidence 01111111 2 23344444311000 00 0000 0111111222 455566677777777777889999999
Q ss_pred HHHhHhHHHHcCCCCCcccccCCCCccEEEEcCC
Q psy10113 391 AVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYK 424 (596)
Q Consensus 391 ~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~ 424 (596)
+++|.|||++||++++.|+|++|+.||||+||.+
T Consensus 331 ~~aT~npA~~lg~~~~~G~i~~G~~ADlvv~d~~ 364 (374)
T cd00854 331 RMASLNPAKLLGLDDRKGSLKPGKDADLVVLDDD 364 (374)
T ss_pred HHHhHHHHHHcCCCCCcCCcCCCCcCCEEEECCC
Confidence 9999999999999777999999999999999986
No 83
>PRK10027 cryptic adenine deaminase; Provisional
Probab=99.96 E-value=1.4e-26 Score=254.89 Aligned_cols=330 Identities=19% Similarity=0.179 Sum_probs=212.2
Q ss_pred cccEEEEccEEEcC--CCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHH
Q psy10113 18 QNRLLIKNGKVVNA--DKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYH 95 (596)
Q Consensus 18 ~~~llIkng~Iv~~--d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~ 95 (596)
..+++|+|++|++. .....++|+|+||+|++|++......+.++||++|++|+|||||+|+|+.+++ .++++|
T Consensus 29 ~~dllI~ng~vv~~~~~~~~~~~V~I~~GrI~~Vg~~~~~~~~~~vIDa~G~~v~PGlIDaHvHiess~---~~p~~~-- 103 (588)
T PRK10027 29 VADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYADAPALQRIDARGATAVPGFIDAHLHIESSM---MTPVTF-- 103 (588)
T ss_pred CCCEEEECcEEEeCCCCcEEeeEEEEECCEEEEeCCCCCCCCCCeEEECCCCEEEECeEeccccCCccc---CCHhHH--
Confidence 46799999999985 33457899999999999976433223568999999999999999999998764 356777
Q ss_pred HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhcc-CceeeeeccccccC---CCh----hHHHHHHHHHHHcCCCE
Q psy10113 96 GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADE-KVCCDYALHVGITW---WSD----QVQQEMAELCEKHGVNS 167 (596)
Q Consensus 96 g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~---~~~----~~~~e~~~lv~~~Gv~~ 167 (596)
.++++.+||||+++.....+.....+.++...+.+.. .....+.+...++. +.. -..++++++.++.++-+
T Consensus 104 -a~aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~p~~~~~~~ps~vpa~~~~Et~Ga~~~~~~~~~~l~~~~v~g 182 (588)
T PRK10027 104 -ETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQVTG 182 (588)
T ss_pred -HHHHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhCCCeeEEeecccCcCCcccccCCCcCCHHHHHHHhcCCCcee
Confidence 4468999999999854322222222233322222221 11112222222222 111 14568888888888999
Q ss_pred EEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHh
Q psy10113 168 FKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIA 247 (596)
Q Consensus 168 ~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la 247 (596)
+...|.|.+....+++.+.++... .+..+..|+..-. ......++..|+.. .|+...++++. + +.
T Consensus 183 lgEvMn~~~V~~~d~~~~~ki~~~---~~~~idGH~p~l~--g~~L~ay~aaGi~s--DHE~~t~eea~-e---kl---- 247 (588)
T PRK10027 183 LAEMMDYPGVISGQNALLDKLDAF---RHLTLDGHCPGLG--GKELNAYIAAGIEN--CHESYQLEEGR-R---KL---- 247 (588)
T ss_pred EEeccCccccccCCHHHHHHHHHh---CCCceECCCCCCC--hHHHHHHHHcCCCC--CcccCCHHHHH-H---HH----
Confidence 999999999887777777777733 8999999987533 33445556666664 34444443321 1 10
Q ss_pred cccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHH
Q psy10113 248 NQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLL 327 (596)
Q Consensus 248 ~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~ 327 (596)
..|.-+.+.+-+... +.+.|.
T Consensus 248 -r~Gm~v~iRegS~~~----------------------------------------------------------nl~~l~ 268 (588)
T PRK10027 248 -QLGMSLMIREGSAAR----------------------------------------------------------NLNALA 268 (588)
T ss_pred -HCCCEEEEeCCcccc----------------------------------------------------------CHHHHH
Confidence 112222222221111 112222
Q ss_pred HHHhc--CCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCC
Q psy10113 328 TLLNE--NALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYP 405 (596)
Q Consensus 328 ~~l~~--G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~ 405 (596)
.++.. -..+++.||......-.+ +..+....++++...++++.+|++++|.|||++||+.
T Consensus 269 ~~~~~~~~~~~~l~TDd~~~~~l~~-----------------~Ghi~~~vr~av~~~Gi~~~~Ai~mAT~nPA~~lgl~- 330 (588)
T PRK10027 269 PLINEFNSPQCMLCTDDRNPWEIAH-----------------EGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLN- 330 (588)
T ss_pred HHhhccCCCeEEEEcCCCChHHHHh-----------------ccCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCC-
Confidence 22221 134577888643221111 2234455556666678999999999999999999995
Q ss_pred CcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCcee
Q psy10113 406 KKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLR 469 (596)
Q Consensus 406 ~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~ 469 (596)
+.|+|++|+.||||+||..... .+..||++|++|+++ ++.
T Consensus 331 d~G~IapG~~ADlvvld~l~~~-----------------------~v~~v~~~G~~v~~~-~~~ 370 (588)
T PRK10027 331 HLGLLAPGKQADIVLLSDARKV-----------------------TVQQVLVKGEPIDAQ-TLQ 370 (588)
T ss_pred CCcccCCCCcCCEEEEccCCCc-----------------------eEEEEEECCEEeecc-ccc
Confidence 5899999999999999953111 357999999999998 654
No 84
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=99.96 E-value=3.3e-27 Score=254.76 Aligned_cols=376 Identities=21% Similarity=0.239 Sum_probs=232.1
Q ss_pred ccEEEEccEEEcCCCc---eeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCcccc----------
Q psy10113 19 NRLLIKNGKVVNADKI---SDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM---------- 85 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~---~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~---------- 85 (596)
+.++|++..++..+.. ..++|.|+||+|+.||+....+++.++||+.|++|+|||||+|+|+.+..+
T Consensus 2 ~~~~i~~~~~~~~d~~~~~~~~~~~i~~g~I~~ig~~~~~~~~~~~iD~~~~lv~Pgfvn~H~H~~~t~~~g~~~~~~l~ 81 (421)
T COG0402 2 TMLLIRGDLLLTNDPEGRIEDGDLVIEDGKIVAIGANAEGPPDEEVIDAKGKLVLPGFVNAHTHLDQTLLRGLADDLPLL 81 (421)
T ss_pred cceeeeCcEEeecCcccceeeeeEEEcCCEEEEeCCcCCCCCCceeecCCCCEeccCccccccchHHHHHhhhhcccchH
Confidence 4578888888875433 469999999999999997665457899999999999999999999854221
Q ss_pred ------------CCCCcchHHH----HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccC----ceeeeeccccc
Q psy10113 86 ------------GATSVDDFYH----GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEK----VCCDYALHVGI 145 (596)
Q Consensus 86 ------------~~~~~d~~~~----g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~ 145 (596)
...+.++.+. +...++++|||+++.+..... .+...+++...+..... ...+.++....
T Consensus 82 ~wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~~~~~-~~~~~~~~a~~~~g~r~~~~~~~~~~~~p~~~ 160 (421)
T COG0402 82 EWLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHVDVVA-ESADAAFEAALEVGLRAVLGPVLQDVAFPDPG 160 (421)
T ss_pred HHHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCccccccccchhh-hhHHHHHHHHHHhCCeeEeeeccccCCCCccc
Confidence 1134455554 344667899999766543222 12222333333332211 11111111112
Q ss_pred cCCChhHHHHHHHHHHH-cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEec-CchhhhHHHHHHHHHcCCCC
Q psy10113 146 TWWSDQVQQEMAELCEK-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHA-ENGEIIDKNTQKLLAAGIKG 223 (596)
Q Consensus 146 ~~~~~~~~~e~~~lv~~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHa-e~~~~i~~~~~~l~~~Gi~~ 223 (596)
....+. .++.+++.++ .+.....+...++..+.++++.+..+.+.++++|.++++|+ |+.+.+....+ ..|..
T Consensus 161 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~~---~~g~~- 235 (421)
T COG0402 161 AETDEE-LEETEELLREAHGLGRDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIHLAETLDEVERVLE---PYGAR- 235 (421)
T ss_pred ccchHH-HHHHHHHHHHHhcCCCeeEEEecCCCCCCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHHh---hcCCC-
Confidence 222221 2333444333 34445677778888889999999999999999999999996 55543333322 12221
Q ss_pred CCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCc
Q psy10113 224 PEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCT 303 (596)
Q Consensus 224 ~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~ 303 (596)
|- + -.......+-+..+.|+......+. ...++. |+. .++|+..+..|...
T Consensus 236 --------~~----~----~~~~~g~l~~~~~~~H~~~~~~~e~-~~l~~~----g~~-v~~cP~sN~~L~sG------- 286 (421)
T COG0402 236 --------PV----E----RLDLLGLLGSHTLLAHCVHLSEEEL-ELLAES----GAS-VVHCPRSNLKLGSG------- 286 (421)
T ss_pred --------HH----H----HHHHcCCCCCCeEEEEeccCCHHHH-HHHhhC----CCe-EEECcchhccccCC-------
Confidence 11 1 1112233344445555554332223 222244 661 44555554443221
Q ss_pred cccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCC
Q psy10113 304 WHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGI 383 (596)
Q Consensus 304 ~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~ 383 (596)
..| +.+++..|+.+.+|||...++....++. +++...++++......
T Consensus 287 ---------~~p----------~~~~~~~gv~v~~gTD~~~~~~~~d~l~--------------~~~~a~~l~~~~~~~~ 333 (421)
T COG0402 287 ---------IAP----------VRRLLERGVNVALGTDGAASNNVLDMLR--------------EMRTADLLQKLAGGLL 333 (421)
T ss_pred ---------CCC----------HHHHHHcCCCEEEecCCccccChHHHHH--------------HHHHHHHHHHhhcCCC
Confidence 111 3378899999999999988887544431 6666666665544222
Q ss_pred CCHH--HHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEE
Q psy10113 384 LSPE--KFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRV 461 (596)
Q Consensus 384 l~~~--e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~Grv 461 (596)
.+.. ++++++|.|+||+||+ .+.|+|++|++||||++|++.+...... .. +......-...+..|+++|+.
T Consensus 334 ~~~~~~~~l~~aT~~gA~alg~-~~~G~le~G~~ADlvvld~~~~~~~~~~-~~-----~~~v~~~~~~~v~~v~~~g~~ 406 (421)
T COG0402 334 AAQLPGEALDMATLGGAKALGL-DDIGSLEVGKKADLVVLDASAPHLAPLR-PV-----SRLVFAAGGKDVDRVLVDGRL 406 (421)
T ss_pred cccchHHHHHHHHhhHHHHcCC-cccCCcccccccCEEEEcCCCCcccccc-HH-----HHHHHhcCCCceeEEEECCEE
Confidence 2222 3899999999999999 7899999999999999999976444332 10 011111122268999999999
Q ss_pred EEECCcee
Q psy10113 462 CVDEGNLR 469 (596)
Q Consensus 462 V~~dG~~~ 469 (596)
|+++|++.
T Consensus 407 v~~~~~~~ 414 (421)
T COG0402 407 VMEDGRLL 414 (421)
T ss_pred EEEcceeh
Confidence 99999875
No 85
>PLN02599 dihydroorotase
Probab=99.96 E-value=1.2e-27 Score=249.96 Aligned_cols=294 Identities=15% Similarity=0.108 Sum_probs=224.2
Q ss_pred EEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccC--ceeeeeccccc
Q psy10113 68 YVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEK--VCCDYALHVGI 145 (596)
Q Consensus 68 ~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~ 145 (596)
+.+|---|.|+|+.. ..+...+.-..++|+|++++|....+..+..+.++.+++.+... ..+||++++.+
T Consensus 23 ~~~~~~~d~h~hlr~--------~~~~~~~~~~~~gg~t~~i~MPn~~Ppv~~~~~~~~~~~~~~~~~~~~vdf~~~~~l 94 (364)
T PLN02599 23 LTITRPDDWHLHLRD--------GAKLAAVVPHSARHFGRAIVMPNLKPPVTTTARALAYRERIMKALPPGSSFEPLMTL 94 (364)
T ss_pred EEecCCcceeeEccC--------cHHHHhhhHHhcCCcCEEEECCCCCCCcCCHHHHHHHHHHHhhhcCCCcceEEEEEE
Confidence 668999999999964 23445566678999999999987666777788888888887766 55799998766
Q ss_pred cCCChhHHHHHHHHHHHcCCC-EEEEEeecCC---CccCC-HHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcC
Q psy10113 146 TWWSDQVQQEMAELCEKHGVN-SFKTFMAYKG---LYMLS-DGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAG 220 (596)
Q Consensus 146 ~~~~~~~~~e~~~lv~~~Gv~-~~k~~~~~~~---~~~~~-~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~G 220 (596)
........++++++ .+.|+. +||+|+.... ...++ ++.++++++.++++|+++.+|+|+.+.....
T Consensus 95 ~lt~~~~l~Ei~~~-~~~Gvv~gfKlyp~~~tt~s~~gv~d~~~l~~~le~~~e~G~~L~vH~E~~~~~~~~-------- 165 (364)
T PLN02599 95 YLTDNTTPEEIKAA-KASGVVFAVKLYPAGATTNSQAGVTDLGKCLPVLEEMAEQGMPLLVHGEVTDPSVDI-------- 165 (364)
T ss_pred ecCCCCCHHHHHHH-HHCCCcEEEEECcccCcCCCccccCCHHHHHHHHHHHHhcCCEEEEecCCCcccccc--------
Confidence 22222346788887 456998 9999985321 12234 5899999999999999999999985431100
Q ss_pred CCCCCcccCCChHHHHHHHHHHHH--HHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCC
Q psy10113 221 IKGPEGHQLSRPEEVEAEAVTRAC--TIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHAN 298 (596)
Q Consensus 221 i~~~~~~~~~~p~~~e~~a~~~~i--~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~ 298 (596)
..+ |...+.+.+ .+++..++++|+.|+++.++.+.+++++.. .|++|+|++||.++..
T Consensus 166 --------~~~----E~~~i~r~l~~~la~~~g~kI~i~HiSt~~~ve~v~~ak~~--------~vtae~tpHhL~l~~~ 225 (364)
T PLN02599 166 --------FDR----EKVFIDTILAPLVQKLPQLKIVMEHITTMDAVEFVESCGDG--------NVAATVTPQHLLLNRN 225 (364)
T ss_pred --------ccc----HHHHHHHHHHHHHHhccCCeEEEEecChHHHHHHHHhccCC--------CEEEEecHHHHhcCHH
Confidence 001 223456777 588889999999999999999999987643 6999999999999987
Q ss_pred CCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCc-cEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHH---HHHHH
Q psy10113 299 QIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENAL-QTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQD---RLSVI 374 (596)
Q Consensus 299 ~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~-~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~---~~~~~ 374 (596)
++... .....+.++||+|. .+++++||+++.+|.+ .+++|||+|+....|. .|+|.+|++. .++++
T Consensus 226 ~~~~~-~~~~~~k~~PPlR~-~~dr~aL~~al~~G~i~~~i~SDHaPh~~~~K~--------~~~g~~Gi~~~~~~l~~l 295 (364)
T PLN02599 226 ALFQG-GLQPHNYCLPVLKR-EIHREALVKAATSGSKKFFLGTDSAPHPKRAKE--------ASCGCAGIYSAPVALSLY 295 (364)
T ss_pred HHhcc-CCCCCeEEECCCCC-HHHHHHHHHHHHcCCCCEEEecCCCCCChHHhc--------CCCCCCCcccHHHHHHHH
Confidence 76421 12345789999998 7899999999999996 8999999999877653 3556666666 57776
Q ss_pred HHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccc
Q psy10113 375 WEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVI 410 (596)
Q Consensus 375 ~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I 410 (596)
+..+.+.+ +++++++++|.||||+|||..+||+|
T Consensus 296 ~~~~~~~g--~l~~l~~~~S~npA~~~gL~~~kg~i 329 (364)
T PLN02599 296 AKAFEEAG--ALDKLEAFTSFNGPDFYGLPRNTSTI 329 (364)
T ss_pred HHHHHhcC--CHHHHHHHHhHHHHHHhCCCCCCCeE
Confidence 65444434 89999999999999999994478874
No 86
>PRK08418 chlorohydrolase; Provisional
Probab=99.96 E-value=6.3e-27 Score=251.04 Aligned_cols=362 Identities=15% Similarity=0.133 Sum_probs=205.8
Q ss_pred EEEEccEEEcCCC----ceeeeEEEECCeEEEeccCCCC---CCCCeEEEcCCCEEeeCccccccCCCccccCC------
Q psy10113 21 LLIKNGKVVNADK----ISDLDIYIENGVIQQLGRNLIV---PGGVRVIDAAGSYVIPGGIDPHTHFELELMGA------ 87 (596)
Q Consensus 21 llIkng~Iv~~d~----~~~~dV~IedG~I~~Ig~~~~~---~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~------ 87 (596)
.+|+|++|++.+. ..+++|.|+ |+|++||+.... ..+.++||+.|++|||||||+|+|+.+.....
T Consensus 2 ~~i~~~~v~t~~~~~~~~~~~~v~v~-~~I~~ig~~~~~~~~~~~~~vid~~g~~v~PG~Vn~H~H~~~~~~rg~~~~~~ 80 (408)
T PRK08418 2 KIIGASYIFTCDENFEILEDGAVVFD-DKILEIGDYENLKKKYPNAKIQFFKNSVLLPAFINPHTHLEFSANKTTLDYGD 80 (408)
T ss_pred EEEEccEEEecCCCCceeeccEEEEC-CEEEEecCHHHHHhhCCCCcEEecCCcEEccCccccccchhhhhhccccCCCc
Confidence 5799999997652 246899999 999999974221 22456999999999999999999985432110
Q ss_pred --------------CCcchHH----HHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeecc-cccc-C
Q psy10113 88 --------------TSVDDFY----HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALH-VGIT-W 147 (596)
Q Consensus 88 --------------~~~d~~~----~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~-~ 147 (596)
...++.+ .+...++++||||+.|+.... ...+++. +.+.+..++.. .+.. .
T Consensus 81 ~~~wl~~~~~~~~~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~~~~---~~~~a~~------~~GiR~~~~~~~~~~~~~ 151 (408)
T PRK08418 81 FIPWLGSVINHREDLLEKCKGALIQQAINEMLKSGVGTIGAISSFG---IDLEICA------KSPLRVVFFNEILGSNAS 151 (408)
T ss_pred hHHHHHHHhhhhhhcCHHHHHHHHHHHHHHHHhcCceEEEEeecch---hhHHHHH------hcCCeEEEEeeeeCCCcc
Confidence 1122222 244566899999999875321 1122222 12222222111 0111 1
Q ss_pred CChhHHHHHHHHHHH---cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHH-cCC--
Q psy10113 148 WSDQVQQEMAELCEK---HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLA-AGI-- 221 (596)
Q Consensus 148 ~~~~~~~e~~~lv~~---~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~-~Gi-- 221 (596)
......+++...+.. .....++..+++++.+.++++.+.++.+.|+++|+++++|..+... +.+...+ .|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aph~~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~---E~~~~~~~~G~~~ 228 (408)
T PRK08418 152 AVDELYQDFLARFEESKKFKSKKFIPAIAIHSPYSVHPILAKKALQLAKKENLLVSTHFLESKA---EREWLEESKGWFK 228 (408)
T ss_pred chhhhHHHHHHHHHhhhcccCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCHH---HHHHHHhccCchh
Confidence 111111222211211 1234577888899999999999999999999999999999754321 1111111 121
Q ss_pred -----CCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecC
Q psy10113 222 -----KGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTH 296 (596)
Q Consensus 222 -----~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~ 296 (596)
.+.+.-...+|-+. +. .+. +.+..+.|+..-.. +.++..++. |.. .+++......++.
T Consensus 229 ~~~~~~~~~~~~~~~pv~~----l~---~~g---~~~~~~~H~~~~~~-~di~~la~~----g~~-v~~cP~sn~~lg~- 291 (408)
T PRK08418 229 KFFEKFLKEPKPLYTPKEF----LE---LFK---GLRTLFTHCVYASE-EELEKIKSK----NAS-ITHCPFSNRLLSN- 291 (408)
T ss_pred hhhhhhcccccccCCHHHH----HH---HhC---CCCeEEEecccCCH-HHHHHHHHc----CCc-EEECHhHHHHhcC-
Confidence 00000001122111 11 111 34566777764332 223444444 651 2333322211110
Q ss_pred CCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHH
Q psy10113 297 ANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWE 376 (596)
Q Consensus 297 ~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~ 376 (596)
..+| +.++++.|+.+++|||....+....++ -++++.....
T Consensus 292 ---------------g~~p----------~~~~~~~Gi~v~lGtD~~~~~~~~~~~--------------~em~~~~~~~ 332 (408)
T PRK08418 292 ---------------KALD----------LEKAKKAGINYSIATDGLSSNISLSLL--------------DELRAALLTH 332 (408)
T ss_pred ---------------CCcc----------HHHHHhCCCeEEEeCCCCCCCCCcCHH--------------HHHHHHHHHh
Confidence 1123 337999999999999975544322221 1444444333
Q ss_pred hhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEE
Q psy10113 377 KGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVI 456 (596)
Q Consensus 377 ~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi 456 (596)
+.. .....+.++++++|.|+|++||+. .|+|++|+.||||++|.+...+ +. ..+|+.-+.....|..||
T Consensus 333 ~~~-~~~~~~~~~l~~aT~~gA~alg~~--~G~l~~G~~ADlv~~d~~~~~~-~~-------~~~~~~~~~~~~~v~~v~ 401 (408)
T PRK08418 333 ANM-PLLELAKILLLSATRYGAKALGLN--NGEIKEGKDADLSVFELPEECT-KK-------EQLPLQFILHAKEVKKLF 401 (408)
T ss_pred ccC-CccccHHHHHHHHHHHHHHHhCCC--CccccCCCccCEEEEeCCCCCC-Ch-------hHhHHHHHhccCccceEE
Confidence 221 112346899999999999999994 7999999999999999863211 10 122332222334789999
Q ss_pred ECCEEE
Q psy10113 457 VGGRVC 462 (596)
Q Consensus 457 ~~GrvV 462 (596)
++|++|
T Consensus 402 v~G~~v 407 (408)
T PRK08418 402 IGGKEV 407 (408)
T ss_pred ECCEEc
Confidence 999987
No 87
>PRK14085 imidazolonepropionase; Provisional
Probab=99.95 E-value=4e-26 Score=243.45 Aligned_cols=317 Identities=19% Similarity=0.165 Sum_probs=190.4
Q ss_pred ccEEEEc-cEEEcCCC---------ceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccC--
Q psy10113 19 NRLLIKN-GKVVNADK---------ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG-- 86 (596)
Q Consensus 19 ~~llIkn-g~Iv~~d~---------~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~-- 86 (596)
|+++|+| +.|++.+. ..+++|+|+||+|++|++....+.+.++||++|++|||||||+|+|+.+....
T Consensus 1 ~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~~~iD~~g~~v~PGlId~H~Hl~~~~~r~~ 80 (382)
T PRK14085 1 MSTLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADAPAADERVDAGGRAVLPGFVDSHSHLVFAGDRSA 80 (382)
T ss_pred CcEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccCCCCCeEEeCCCCEEecCeEecCcCccccCChhH
Confidence 5789999 59998642 23689999999999999865555577899999999999999999999542110
Q ss_pred ------------------------CCCcchHHH----HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhcc-Ccee
Q psy10113 87 ------------------------ATSVDDFYH----GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADE-KVCC 137 (596)
Q Consensus 87 ------------------------~~~~d~~~~----g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~-~~~~ 137 (596)
..+.++.+. ..+.++++||||+.|+... +..+.+.++..+..... ....
T Consensus 81 ~~~~~~~~~~~~~~~i~~~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 158 (382)
T PRK14085 81 EFAARMAGEPYSAGGIRTTVAATRAASDEELRANVRRLVAEALRQGTTTVETKTGY--GLTVEDEARSARIAAEFTDEVT 158 (382)
T ss_pred HHHhhhcCCCccCCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcC--CCCHHHHHHHHHHHHHhhhcce
Confidence 123344443 4556789999999987422 22233333322211100 0111
Q ss_pred eeeccccccCCC--h-hHHH----HHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhH
Q psy10113 138 DYALHVGITWWS--D-QVQQ----EMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIID 210 (596)
Q Consensus 138 ~~~~~~~~~~~~--~-~~~~----e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~ 210 (596)
..+.+.....+. . ...+ ++...++. ....++++.+. ..++++++.++++.|+++|+++.+|+.+... .
T Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~idi~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~-~ 233 (382)
T PRK14085 159 FLGAHVVPPEYAGDADEYVDLVCGPMLDAVAP-HARWIDVFCER---GAFDEDQSRRVLTAGRAAGLGLRVHGNQLGP-G 233 (382)
T ss_pred eeccccCCcccCCCHHHHHHHHHHHHHHHHHH-hCCeEEEEecC---CCCCHHHHHHHHHHHHHcCCCeEEEeCcccC-C
Confidence 112122111111 1 1111 12234433 45666766542 2468999999999999999999999864210 1
Q ss_pred HHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeecc
Q psy10113 211 KNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLA 290 (596)
Q Consensus 211 ~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~ 290 (596)
...+.+++.|+...+|..+..+ +.++++++. |+ .+. .++
T Consensus 234 ~~v~~~~~~g~~~i~H~~~l~~---------------------------------~~~~~la~~----gv--~~~--~~P 272 (382)
T PRK14085 234 PGVRLAVELGAASVDHCTYLTD---------------------------------ADVDALAGS----GT--VAT--LLP 272 (382)
T ss_pred hHHHHHHHcCCCcHHHhCCCCH---------------------------------HHHHHHHHc----CC--EEE--ECc
Confidence 1234444444443332222221 223344444 55 211 111
Q ss_pred ceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHH
Q psy10113 291 AAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDR 370 (596)
Q Consensus 291 ~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~ 370 (596)
.+. +. .+ .....+.++++.|+.+++|||+.+...... +.
T Consensus 273 ~~~------~~--------------~~---~~~~~~~~l~~aGv~v~lgsD~~~~~~~~~-----------------~~- 311 (382)
T PRK14085 273 GAE------FS--------------TR---QPYPDARRLLDAGVTVALASDCNPGSSYTS-----------------SM- 311 (382)
T ss_pred HHH------Hh--------------cC---CCCchHHHHHHCCCcEEEEeCCCCCCChHH-----------------HH-
Confidence 110 00 00 011235578999999999999854332111 11
Q ss_pred HHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcc
Q psy10113 371 LSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAK 426 (596)
Q Consensus 371 ~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~ 426 (596)
...+...+...++++.++++++|.|||++||++ .+|+|++|+.|||||+|.+..
T Consensus 312 -~~~~~~~~~~~~l~~~~al~~aT~~~A~~lg~~-~~G~l~~G~~ADlvv~d~~~~ 365 (382)
T PRK14085 312 -PFCVALAVRQMGMTPAEAVWAATAGGARALRRD-DVGVLAVGARADLHVLDAPSH 365 (382)
T ss_pred -HHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCC-CCCCcCCCCCCCEEEEcCCCC
Confidence 111222334567899999999999999999996 589999999999999998743
No 88
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.95 E-value=2.1e-26 Score=248.23 Aligned_cols=348 Identities=16% Similarity=0.147 Sum_probs=201.8
Q ss_pred CCCce-eeeE-EEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccC----------------------
Q psy10113 31 ADKIS-DLDI-YIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG---------------------- 86 (596)
Q Consensus 31 ~d~~~-~~dV-~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~---------------------- 86 (596)
+++.. +++| +|+||+|++||+... .++||+.|++|||||||+|+|+.+....
T Consensus 4 ~~~~~~~~~i~~v~~g~I~~Vg~~~~----~~~iD~~g~lv~PGfVn~H~Hl~~~~~rg~~~~~~~~~~~l~~w~~~~~~ 79 (418)
T cd01313 4 PEGWERNVRIEVDADGRIAAVNPDTA----TEAVALLGGALLPGMPNLHSHAFQRAMAGLTEYRGSAADSFWTWRELMYR 79 (418)
T ss_pred CCceecCeEEEEeCCCeEEEecCCCC----CcccccCCCeeccCccccCccHHHHHhcccccccCCCCCChhhHHHHHHH
Confidence 34443 5899 999999999998643 3569999999999999999999553211
Q ss_pred ---CCCcchHHH----HHHHHHhCCceEEeccccCCCC---------ccHHHHHHHHHHHhccCceeeeecc--cc---c
Q psy10113 87 ---ATSVDDFYH----GTKAAVAGGTTTIIDFALPRKG---------ESLIKTYESWRQKADEKVCCDYALH--VG---I 145 (596)
Q Consensus 87 ---~~~~d~~~~----g~~~al~~GtTti~D~~~~~~~---------~~~~~a~~~~~~~~~~~~~~~~~~~--~~---~ 145 (596)
..+.++++. ++..+++.||||+.|+...... ....++..+.......+...-..+. .+ .
T Consensus 80 ~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~~~~~~~~~~ 159 (418)
T cd01313 80 FAARLTPEQIEAIARQLYIEMLLAGITAVGEFHYVHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYARAGFGGP 159 (418)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhCCCEEEEeeeeccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeEEeccCCCCC
Confidence 123344443 3345678999999998532211 0111222222222221222111111 00 1
Q ss_pred cCCC---------hhHHHHHHHHHHH-cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHH
Q psy10113 146 TWWS---------DQVQQEMAELCEK-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQK 215 (596)
Q Consensus 146 ~~~~---------~~~~~e~~~lv~~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~ 215 (596)
.... .+..+.+++++.. .....+...++++....++++.++++++.|++ |+++.+|+.+.. .+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~~a~~-g~~i~~H~~e~~--~e~~~~ 236 (418)
T cd01313 160 APNPGQRRFINGYEDFLGLLEKALRAVKEHAAARIGVAPHSLRAVPAEQLAALAALASE-KAPVHIHLAEQP--KEVDDC 236 (418)
T ss_pred CCchhhhhhcccHHHHHHHHHHHhhhhccCCceEEEEccCCCCCCCHHHHHHHHHHHhc-CCceEEEeCCCH--HHHHHH
Confidence 1010 1122223332211 12234566677777778999999999999999 999999984322 111111
Q ss_pred HHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceee-EEeeccceee
Q psy10113 216 LLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTL-YGETLAAAVG 294 (596)
Q Consensus 216 l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v-~~e~~~~~l~ 294 (596)
....|.. | .+.+.+ ....+-++.+.|+..-.. +.++..++. |. .+ ++......++
T Consensus 237 ~~~~g~~---------~----i~~l~~----~g~l~~~~~~~H~~~l~~-~~~~~la~~----g~--~v~~~P~sn~~lg 292 (418)
T cd01313 237 LAAHGRR---------P----VELLLD----HGHLDARWCLVHATHLTD-NETLLLGRS----GA--VVGLCPTTEANLG 292 (418)
T ss_pred HHHcCCC---------H----HHHHHH----cCCCCCCEEEEeCCCCCH-HHHHHHHHc----CC--EEEECCCchhhcc
Confidence 1112221 1 111111 133566777888875432 335556555 76 32 2222211110
Q ss_pred cCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHH
Q psy10113 295 THANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVI 374 (596)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~ 374 (596)
...||++ +++++|+.+++|||....... |. ++++...
T Consensus 293 ----------------~g~~p~~----------~l~~~Gv~v~lGtD~~~~~d~--------~~---------~~~~~~~ 329 (418)
T cd01313 293 ----------------DGIFPAA----------ALLAAGGRIGIGSDSNARIDL--------LE---------ELRQLEY 329 (418)
T ss_pred ----------------CCCCCHH----------HHHHCCCcEEEecCCCCCcCH--------HH---------HHHHHHH
Confidence 0123444 789999999999995321111 00 2333332
Q ss_pred HHhhcc--------CCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCe
Q psy10113 375 WEKGVV--------PGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGL 446 (596)
Q Consensus 375 ~~~~v~--------~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~ 446 (596)
.++... ...+++.++++++|.|+|++||++ +|+|++||.||||++|.+.++..+.. ..+|+..+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~--~Gsle~Gk~ADlvvld~~~~~~~p~~------~~~~~~~l 401 (418)
T cd01313 330 SQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLA--TGALEAGARADLLSLDLDHPSLAGAL------PDTLLDAW 401 (418)
T ss_pred HHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCC--CCeECCCCccCEEEEcCCCccccCCC------chhHHHHH
Confidence 222221 237899999999999999999994 89999999999999999866544321 12455555
Q ss_pred Eeee---eEEEEEECCE
Q psy10113 447 VCHG---VPEYVIVGGR 460 (596)
Q Consensus 447 ~~~g---~~~~Vi~~Gr 460 (596)
.+.+ .|..||++||
T Consensus 402 v~~~~~~~V~~v~V~G~ 418 (418)
T cd01313 402 VFAAGDREVRDVVVGGR 418 (418)
T ss_pred eecCCCCceeEEEeCCC
Confidence 5444 5889999996
No 89
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=99.95 E-value=3.4e-26 Score=243.85 Aligned_cols=325 Identities=19% Similarity=0.201 Sum_probs=182.4
Q ss_pred eeeeEEEECCeEEEeccCCCCCC--CCeEEEcCCCEEeeCccccccCCCccccC--------------------------
Q psy10113 35 SDLDIYIENGVIQQLGRNLIVPG--GVRVIDAAGSYVIPGGIDPHTHFELELMG-------------------------- 86 (596)
Q Consensus 35 ~~~dV~IedG~I~~Ig~~~~~~~--~~~vIDa~G~~V~PG~ID~HtHl~~~~~~-------------------------- 86 (596)
.+++|+|+||+|++||+....+. +.++||++|++|||||||+|+|+.+....
T Consensus 2 ~~~~v~i~~g~I~~vg~~~~~~~~~~~~~iD~~g~~v~PGlin~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (377)
T TIGR01224 2 EDAVILIHGGKIVWIGQLAALPGEEATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGILST 81 (377)
T ss_pred CceEEEEECCEEEEEechhhCCcccCCeEEeCCCCEEcccEEecccCccccCCcHHHHHHHhCCCCHHHHHHhcCChHHH
Confidence 46899999999999998433332 66899999999999999999999642110
Q ss_pred -----CCCcchHHHH----HHHHHhCCceEEeccccC-CC---CccHHHHHHHHHHHhccCceeeeeccccccC----CC
Q psy10113 87 -----ATSVDDFYHG----TKAAVAGGTTTIIDFALP-RK---GESLIKTYESWRQKADEKVCCDYALHVGITW----WS 149 (596)
Q Consensus 87 -----~~~~d~~~~g----~~~al~~GtTti~D~~~~-~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----~~ 149 (596)
..+.++++.. ...+++.|||++-+.... .. .....++.++...................+. ..
T Consensus 82 ~~~~~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 161 (377)
T TIGR01224 82 VRATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTTFLGAHAVPPEFQGRP 161 (377)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeeecccCCccccCCH
Confidence 1233444433 345688999999322111 00 0112333333333211111100010001111 00
Q ss_pred hhHHHHH-HHHHH---H-cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCC
Q psy10113 150 DQVQQEM-AELCE---K-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGP 224 (596)
Q Consensus 150 ~~~~~e~-~~lv~---~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~ 224 (596)
++..++. +++++ . .++..++.+- .. ...+.+++.++++.|+++|+++.+|+...... ...+.+...|....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~--~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~-~~~~~~~~~g~~~~ 237 (377)
T TIGR01224 162 DDYVDGICEELIPQVAEEGLASFADVFC-EA--GVFSVEQSRRILQAAQEAGLPVKLHAEELSNL-GGAELAAKLGAVSA 237 (377)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeeEEEe-cC--CCcCHHHHHHHHHHHHHCCCCEEEEecCCCCC-CHHHHHHHcCCCcc
Confidence 1111111 11222 1 2366665443 22 23567899999999999999999998542110 01111111121111
Q ss_pred CcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCcc
Q psy10113 225 EGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTW 304 (596)
Q Consensus 225 ~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~ 304 (596)
.|..++ + .+.++++++. |+ .+ ..++.+....+
T Consensus 238 -----------------------------~H~~~~-~---~~~l~~la~~----g~--~~--~~~P~~~~~l~------- 269 (377)
T TIGR01224 238 -----------------------------DHLEHA-S---DAGIKALAEA----GT--VA--VLLPGTTFYLR------- 269 (377)
T ss_pred -----------------------------HHHhcC-C---HHHHHHHHhc----CC--EE--EECchHHHhcC-------
Confidence 122222 2 2334555555 66 32 22222110000
Q ss_pred ccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCC-CChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCC
Q psy10113 305 HDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCT-FNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGI 383 (596)
Q Consensus 305 ~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~-~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~ 383 (596)
...+| +.++++.|+.+++|||+.+ ++.... |...+.......+
T Consensus 270 ------~~~~p----------~~~l~~~Gv~v~lgTD~~~~~~~~~~--------------------~~~~~~~~~~~~~ 313 (377)
T TIGR01224 270 ------ETYPP----------ARQLIDYGVPVALATDLNPGSSPTLS--------------------MQLIMSLACRLMK 313 (377)
T ss_pred ------CcCcc----------HHHHHHCCCCEEEECCCCCCCChhHH--------------------HHHHHHHHHHhcC
Confidence 01223 3368899999999999755 332211 1111222234467
Q ss_pred CCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEE
Q psy10113 384 LSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRV 461 (596)
Q Consensus 384 l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~Grv 461 (596)
+++.++++++|.|||+++|+++++|+|++|+.|||||||.+....+... .....|..||++||+
T Consensus 314 ls~~eal~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~--------------~~~~~v~~v~v~G~~ 377 (377)
T TIGR01224 314 MTPEEALHAATVNAAYALGLGEERGTLEAGRDADLVILSAPSYAEIPYH--------------YGVNHVHAVIKNGNI 377 (377)
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEEcCCChHHhhhh--------------cCCCCceEEEECCCC
Confidence 9999999999999999999987899999999999999999855333211 011268899999985
No 90
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=99.95 E-value=1.1e-26 Score=246.92 Aligned_cols=318 Identities=19% Similarity=0.238 Sum_probs=185.4
Q ss_pred EEEECCeEEEeccCCCCC----CCCeEEEcCCCEEeeCccccccCCCcccc----------C------------------
Q psy10113 39 IYIENGVIQQLGRNLIVP----GGVRVIDAAGSYVIPGGIDPHTHFELELM----------G------------------ 86 (596)
Q Consensus 39 V~IedG~I~~Ig~~~~~~----~~~~vIDa~G~~V~PG~ID~HtHl~~~~~----------~------------------ 86 (596)
|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+.+.+. +
T Consensus 1 i~i~~g~I~~ig~~~~~~~~~~~~~~~iD~~G~~v~Pg~vn~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (371)
T cd01296 1 IAIRDGRIAAVGPAASLPAPGPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTVR 80 (371)
T ss_pred CEEECCEEEEEeCchhcccccCCCceEEECCCCEEecceeecCCCCcCCCCcHHHHHHHHCCCCHHHHHHcCCChHHHHH
Confidence 689999999999854432 46689999999999999999999965321 0
Q ss_pred ---CCCcchHHH----HHHHHHhCCceEEeccccC--C--CCccHHHHHHHHHHHhccCceeeeecc--ccccC-C--Ch
Q psy10113 87 ---ATSVDDFYH----GTKAAVAGGTTTIIDFALP--R--KGESLIKTYESWRQKADEKVCCDYALH--VGITW-W--SD 150 (596)
Q Consensus 87 ---~~~~d~~~~----g~~~al~~GtTti~D~~~~--~--~~~~~~~a~~~~~~~~~~~~~~~~~~~--~~~~~-~--~~ 150 (596)
..+.++++. +...+++.|||++.++... . ......+++++.+... +......+. ...+. . .+
T Consensus 81 ~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~~l~~~~~~~~~~p~~~~~~~ 158 (371)
T cd01296 81 ATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEG--PVDLVSTFLGAHAVPPEYKGRE 158 (371)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhC--CCceEeeeeecccCCcccCChH
Confidence 123344443 4556788999999985211 1 1122344444444431 111111110 01111 1 11
Q ss_pred hHHH-HHHHHH----HHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCC
Q psy10113 151 QVQQ-EMAELC----EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPE 225 (596)
Q Consensus 151 ~~~~-e~~~lv----~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~ 225 (596)
...+ ..+.++ .+.++..++++... ...+.+++.++++.|+++|+.+.+|+....... ..+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~-~~~~~~~------- 227 (371)
T cd01296 159 EYIDLVIEEVLPAVAEENLADFCDVFCEK---GAFSLEQSRRILEAAKEAGLPVKIHADELSNIG-GAELAAE------- 227 (371)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEeecC---CccCHHHHHHHHHHHHHCCCeEEEEEcCcCCCC-HHHHHHH-------
Confidence 1111 112222 23457777766432 235688999999999999999999986532100 0111111
Q ss_pred cccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccc
Q psy10113 226 GHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWH 305 (596)
Q Consensus 226 ~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~ 305 (596)
.++ ..+.|+..-. .+.++++++. |+ .+. .++.....-+
T Consensus 228 ------------------------~g~-~~i~H~~~~~-~~~i~~la~~----g~--~v~--~~P~~~~~l~-------- 265 (371)
T cd01296 228 ------------------------LGA-LSADHLEHTS-DEGIAALAEA----GT--VAV--LLPGTAFSLR-------- 265 (371)
T ss_pred ------------------------cCC-CeeHHhcCCC-HHHHHHHHHc----CC--eEE--EChHHHHHhC--------
Confidence 111 1133433221 2455555555 66 332 2222110000
Q ss_pred cccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCC
Q psy10113 306 DQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILS 385 (596)
Q Consensus 306 ~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~ 385 (596)
. ..+|+ .++++.|+.+++|||+.+..... ..+...+..++...+++
T Consensus 266 --~---~~~~~----------~~l~~~Gv~v~lgsD~~p~~~~~-------------------~~l~~~~~~~~~~~~l~ 311 (371)
T cd01296 266 --E---TYPPA----------RKLIDAGVPVALGTDFNPGSSPT-------------------SSMPLVMHLACRLMRMT 311 (371)
T ss_pred --C---CCCCH----------HHHHHCCCcEEEecCCCCCCChH-------------------HHHHHHHHHHHHhcCCC
Confidence 0 02333 37899999999999985533110 11222233344456799
Q ss_pred HHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECC
Q psy10113 386 PEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGG 459 (596)
Q Consensus 386 ~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~G 459 (596)
++++++++|.|||+++|+++++|+|++|++|||||+|.+....+.... -...+..||++|
T Consensus 312 ~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~--------------~~~~v~~v~~~G 371 (371)
T cd01296 312 PEEALTAATINAAAALGLGETVGSLEVGKQADLVILDAPSYEHLAYRF--------------GVNLVEYVIKNG 371 (371)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceeeCCCCCcCEEEECCCchHhhhhhc--------------CCCCceEEEeCc
Confidence 999999999999999999888999999999999999998653332110 012478899887
No 91
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.95 E-value=1.7e-25 Score=239.65 Aligned_cols=400 Identities=20% Similarity=0.243 Sum_probs=222.9
Q ss_pred EEccEEEcCCCc---eeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccc--cC-C---------
Q psy10113 23 IKNGKVVNADKI---SDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELEL--MG-A--------- 87 (596)
Q Consensus 23 Ikng~Iv~~d~~---~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~--~~-~--------- 87 (596)
|+|++|+++... ..++|+|+||+|++|++.. .+.++||++|++|||||||+|+|+.... .+ .
T Consensus 1 Ikng~V~d~~~~~~~~~~dI~IedGkIv~Vg~~~---~~~~vID~~G~~VmPGfID~HtH~~gg~~~~~r~~~pe~~~~~ 77 (541)
T cd01304 1 IKNGTVYDPLNGINGEKMDIFIRDGKIVESSSGA---KPAKVIDASGKVVMAGGVDMHSHIAGGKVNVGRILRPEDHRRD 77 (541)
T ss_pred CEEEEEEcCCCcccccccEEEEECCEEEEEccCC---CCCeEEECCCCEEECCeeeeeeCccccccccccccChhhhhcc
Confidence 689999997543 4689999999999998743 2458999999999999999999985321 11 1
Q ss_pred --------------CCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeecc-ccccCC----
Q psy10113 88 --------------TSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALH-VGITWW---- 148 (596)
Q Consensus 88 --------------~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~---- 148 (596)
..+..|.+|.+ ..+-|.||+++...+... ...+-++.... ...|-+.. +-...|
T Consensus 78 ~~~~~~~~~~~~g~~~pst~~tgy~-ya~mGytt~~e~a~~p~~--a~h~h~e~~~~----p~~d~~~~~~~gnn~~~~~ 150 (541)
T cd01304 78 PVPKGALRRAGVGFSVPSTLATGYR-YAEMGYTTAFEAAMPPLN--ARHTHEEMADT----PILDKGAYPLLGNNWFVLE 150 (541)
T ss_pred ccccccccccCCCccCCCchHhhhH-HHhcCcceeecccCCccc--chhhhHHhccC----ccccccceEEecchHHHHH
Confidence 12233334333 456889999887655422 22222222221 12221111 111111
Q ss_pred --ChhHHHHHHHHHHH----cCCCEEEEEe----------------ecC-CCccCCHHH-HHHHHHHHHhcCCeEEEecC
Q psy10113 149 --SDQVQQEMAELCEK----HGVNSFKTFM----------------AYK-GLYMLSDGE-LYDAFSAIKNLGAIAMVHAE 204 (596)
Q Consensus 149 --~~~~~~e~~~lv~~----~Gv~~~k~~~----------------~~~-~~~~~~~~~-l~~~~~~a~~~g~~~~vHae 204 (596)
.+...+.+..++.+ ...-.+|+.- +.. -.+.+++.+ +..+.+.+.++|++..+|..
T Consensus 151 ~~~~~~~~~~~~~vaw~l~~tk~~giK~vnpgG~~a~~~~~~~~~~d~~~~~~~vtp~~ii~~l~~~~~~lg~ph~iH~h 230 (541)
T cd01304 151 YLRDGDMEKLAAYVAWTLKASKGYGIKVVNPGGTEAWGWGQNVLSLDDPVPYFDITPREILKGLAEANEELGLPHSIHVH 230 (541)
T ss_pred HHhcCCHHHHHHHHHHHHHhccceEEEEECCCchhhhccCCccccccCCCCCCCCCHHHHHHHHHHHHHhcCCceEEEEc
Confidence 11122233333322 1222233321 111 124567666 55666777788988777754
Q ss_pred chhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCC-----CeEEEecC--c---------HHHHHHH
Q psy10113 205 NGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDC-----PLYVVHIM--S---------KAAGDAM 268 (596)
Q Consensus 205 ~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~-----p~~i~hv~--s---------~~~~~~i 268 (596)
-.. +|.. .. .+.+...+.+++.... .+|++|++ + ...++.|
T Consensus 231 ~nn-----------lg~p----------gn--~~~t~~t~~~~~~~~~~~~~~~~h~tH~qfhsyg~~~~~~~~s~a~~i 287 (541)
T cd01304 231 CNN-----------LGVP----------GN--YETTLETMKAAEGVKPDPRRQVLHLTHVQFHSYGGTSWRDFESGAERI 287 (541)
T ss_pred ccc-----------CCCC----------Cc--HHHHHHHHHHhhcCCCccccceeEeeeeeEEeeccCCcccHhHHHHHH
Confidence 211 1222 21 2444566777665554 59999996 1 3456667
Q ss_pred HHHHHHHhhcCCceeeEEeeccceee------c------CCCCCCCc-cccccc-----cccCCCCC-CCCCcHHHH---
Q psy10113 269 AYKRKELMKKGKHCTLYGETLAAAVG------T------HANQIPCT-WHDQAA-----HVLSPPLR-PDETTPTHL--- 326 (596)
Q Consensus 269 ~~a~~~~~~~G~~~~v~~e~~~~~l~------~------~~~~~~~~-~~~~~~-----~~~~Pplr-~~~~~~~~l--- 326 (596)
..+... +. .++.++....+. - +...+... |..... .... |+. ...+....|
T Consensus 288 ~~~~n~----~~--~it~D~G~v~f~~t~tmt~d~~~~~~~~~~~~~kw~~~d~e~e~g~Gvv-p~~y~~k~~v~~lqwa 360 (541)
T cd01304 288 ADYVNA----ND--HVTIDVGQVIFGETTTMTGDGPMQFDLHGLTGLKWVNCDIELETGSGVV-PFIYSPKNPVNALQWA 360 (541)
T ss_pred HHHHHc----CC--CEEEEeCceecCCcEEEEccchhhcccccccCCceeeeeeEeccCCceE-EeEecCCCCchHHHHH
Confidence 766655 55 555444332111 1 11111111 332211 1111 433 223333333
Q ss_pred ----HHHHhcCC-ccEEeCCCC---CCChhhhhhCCCCCCcCCCCCcchHHHHHHH---HHh-------hccCCCCCHHH
Q psy10113 327 ----LTLLNENA-LQTTGSDNC---TFNKNQKELGKDSFTHIPNGVNGVQDRLSVI---WEK-------GVVPGILSPEK 388 (596)
Q Consensus 327 ----~~~l~~G~-~~~~gsD~~---~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~---~~~-------~v~~~~l~~~e 388 (596)
+.++.... .+.++|||. ||....+.+.. +-.-+.|...+ ... .-....+++++
T Consensus 361 iglEl~ll~~dp~~~~~tTDhPn~gpf~~YP~~i~~---------lm~~~~r~~~~~~~~~~~~~~~~l~~~~reLSLee 431 (541)
T cd01304 361 IGLELFLLIDDPWKVILTTDHPNGGPFTRYPRIIAW---------LMSKKFRAEEIATLHKWAQDRSALPGIDREYSLYE 431 (541)
T ss_pred HHHHHHHHhCCcceEEeecCCCCCCCcccHHHHHHH---------HhCHHHHHHHHHhcCHHHHhhccccCCCCCCCHHH
Confidence 11333344 799999984 44333221100 00001122111 000 01234579999
Q ss_pred HHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCce
Q psy10113 389 FVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNL 468 (596)
Q Consensus 389 ~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~ 468 (596)
+++++|.||||+||+. ++|+|++|++|||+|+|++.. ++..+.+.+ . ....|+|..||++|++|+++|++
T Consensus 432 i~~mtT~nPAKiLGL~-~kG~L~~G~~ADLvIfD~n~~-~v~~~dl~s-----~---~~~~gkV~~Tiv~GkvVv~dGei 501 (541)
T cd01304 432 IAIMTRAGPAKLLGLS-DKGHLGVGADADIAIYDDDPD-QVDPSDYEK-----V---EKAFSRAAYVLKDGEIVVKDGEV 501 (541)
T ss_pred HHHHHHHHHHHHhCCC-CCCccCCCCcCCEEEEeCCcC-ccCchhhcC-----c---eeecCcEEEEEECCEEEEECCEE
Confidence 9999999999999994 689999999999999998866 444433321 1 46678899999999999999998
Q ss_pred eecCCCCeeecCCC
Q psy10113 469 RVAQGQGNYLPTHT 482 (596)
Q Consensus 469 ~~~~g~g~~~~~~~ 482 (596)
... ..|+.+-..+
T Consensus 502 v~~-~~G~~l~~~~ 514 (541)
T cd01304 502 VAE-PWGRTYWVDV 514 (541)
T ss_pred ccC-CCCcEEEEec
Confidence 754 3677776554
No 92
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.95 E-value=7e-25 Score=232.58 Aligned_cols=336 Identities=24% Similarity=0.237 Sum_probs=189.8
Q ss_pred ccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCC-CEEeeCccccccCCCccccCCCCcchHHHHH
Q psy10113 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAG-SYVIPGGIDPHTHFELELMGATSVDDFYHGT 97 (596)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G-~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~ 97 (596)
++++|+|++|+|+. ..+|+|+||||++|++....+ +.++||++| ++|+|||||+|+|+..+.. ...+++ .
T Consensus 1 ~~~~i~n~~i~~~~---~~~v~i~~g~I~~v~~~~~~~-~~~~iD~~g~~~l~PG~ID~H~H~~~~~~--~~~~~~---~ 71 (365)
T TIGR03583 1 YDLLIKNGRTVNGT---PVDIAIEDGKIAAVGTTITGS-AKQTIDLEGETYVSAGWIDDHTHCFPKSA--LYYDEP---D 71 (365)
T ss_pred CcEEEECcEEecCC---eeEEEEECCEEEEecCCCCCC-CCeEEECCCCeEEecCEEEeeeccCCCcc--cccCCH---h
Confidence 46899999999853 459999999999998754333 468999999 9999999999999964332 122333 2
Q ss_pred HHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCc--eeeeecccccc-----CCChhHHHHHHHHHHH-c-CCCEE
Q psy10113 98 KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKV--CCDYALHVGIT-----WWSDQVQQEMAELCEK-H-GVNSF 168 (596)
Q Consensus 98 ~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~e~~~lv~~-~-Gv~~~ 168 (596)
..++++|||+++++....+ .+....++.. +....+. .+++..+...+ .+.....+++++++.. . ++.+|
T Consensus 72 ~~a~~~GvTt~~~~~~~~~-~~~~~~~~~~-~~~~~~v~~~~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~vv~~ 149 (365)
T TIGR03583 72 EIGVKTGVTTVVDAGSTGA-DDIDDFYRLA-QQAKTNVFALLNISRIGLVAQDELADLSNLDASAVKQAVERYPDFIVGL 149 (365)
T ss_pred HhhhcCceeEEEeCCCCCC-CCHHHHHHHH-HhhCCcEEEEeeehhccccChhhhhChHHhHHHHHHHHHHhCcCcEEEE
Confidence 4468999999998753222 2333333322 2222122 12222222111 1122234555655543 2 36778
Q ss_pred EEEeecCCCc--cCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHH
Q psy10113 169 KTFMAYKGLY--MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTI 246 (596)
Q Consensus 169 k~~~~~~~~~--~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~l 246 (596)
+.+|+..... .+++.++.+.+..+ +++.++.+|+++..... +.+.+.+
T Consensus 150 ~~~~t~~~i~E~gl~~~~~~~~l~~~-~~~~pv~vH~~~a~~~~---------------------------~~i~~~~-- 199 (365)
T TIGR03583 150 KARMSKSVVGDNGIEPLEIAKQIQQE-NLELPLMVHIGSAPPEL---------------------------DEILALM-- 199 (365)
T ss_pred EEeecccccccCCcCHHHHHHHHHHh-cCCCcEEEEeCCCccCH---------------------------HHHHHHh--
Confidence 8888743222 23455665555444 68999999998743211 1111111
Q ss_pred hcccCCCeEEEecCcHHH----------HHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCC
Q psy10113 247 ANQVDCPLYVVHIMSKAA----------GDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPL 316 (596)
Q Consensus 247 a~~~~~p~~i~hv~s~~~----------~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Ppl 316 (596)
..+ ..++|+.+... .+.+..+... |+ ..+..+-.. ++
T Consensus 200 --~~g--~~~~H~fng~~~~~~r~~g~~~~~~~~~l~~----G~-------------i~d~~hg~~------------~~ 246 (365)
T TIGR03583 200 --EKG--DVLTHCFNGKPNGILRETGEVKPSVLEAYNR----GV-------------ILDVGHGTA------------SF 246 (365)
T ss_pred --cCC--CeeeeeecCCCCCCCCCcchHHHHHHHHHhC----eE-------------EEEeCCCCC------------Cc
Confidence 111 13456553221 1222323223 44 111111000 00
Q ss_pred CCCCCcHHHHHHHHhcCC-ccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhH
Q psy10113 317 RPDETTPTHLLTLLNENA-LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTST 395 (596)
Q Consensus 317 r~~~~~~~~l~~~l~~G~-~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~ 395 (596)
..+....+...+. +.+.++|. ...+..+|....+...+++++. .+++++++++++|.
T Consensus 247 -----~~~~~~~~~~~~~~~~td~~d~----------------~~~~~~~gp~~~l~~~~~~~~~-~g~~~~ea~~~~t~ 304 (365)
T TIGR03583 247 -----SFHVAEKAKRAGIFPDTISTDI----------------YIRNRINGPVYSLATVMSKFLA-LGYSLEEVIEKVTK 304 (365)
T ss_pred -----hHHHHHHHHhCCCCCccccccc----------------ccCCCccCccccHHHHHHHHHH-cCCCHHHHHHHHHH
Confidence 1111222333332 22333332 1112344555556777777764 47999999999999
Q ss_pred hHHHHcCCCCCcccccCCCCccEEEEcCCcce-eecCCCccCCCCCCcccCeEeee----eEEEEEECCEEE
Q psy10113 396 NAAKIFNLYPKKGVIAEGSDADIVVWNYKAKR-TISAKTHAHACDYNIFEGLVCHG----VPEYVIVGGRVC 462 (596)
Q Consensus 396 n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~-~i~~~~~~~~~~~~~~~g~~~~g----~~~~Vi~~GrvV 462 (596)
|||++||+. ++|+|++|++|||++||.+... .+.. ..|-+..+ .|..|+.+|++.
T Consensus 305 npa~~~gl~-~~g~i~~g~~ad~~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~ 364 (365)
T TIGR03583 305 NAAEILKLT-QKGRLQEGYDADLTIFTVKAEPKKLTD-----------SEGDSRIAEEQIKPLAVIIGGEYY 364 (365)
T ss_pred HHHHHhCCC-CCCCcCCCCcccEEEEecCCCCceeec-----------CCCCEEEeccccceEEEEECCEEe
Confidence 999999994 5899999999999999985332 2211 12223332 567888888864
No 93
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.95 E-value=9e-26 Score=242.94 Aligned_cols=404 Identities=21% Similarity=0.288 Sum_probs=215.6
Q ss_pred EEEEccEEEcCCCce---eeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCcc--ccCC-CCcchHH
Q psy10113 21 LLIKNGKVVNADKIS---DLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELE--LMGA-TSVDDFY 94 (596)
Q Consensus 21 llIkng~Iv~~d~~~---~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~--~~~~-~~~d~~~ 94 (596)
++|+|++|+++.... .++|+|+||+|++|++... .+.++||++|++|||||||+|+|+..+ +++. ..++++.
T Consensus 2 ~iIkng~I~dp~~~~~~~~~dI~IedGkIveIg~~~~--~~~eVIDa~G~vVmPGfID~HvHg~gG~~~~~R~~~pE~~~ 79 (556)
T TIGR03121 2 ILIKNGTVYDPANGIDGEVMDIFIRDGKIVEPVSGGT--KPAKVIDASGKLVMAGGVDSHTHIAGPKVNVGRLLRPEDHR 79 (556)
T ss_pred EEEEeEEEEcCCCCccccccEEEEECCEEEEecCCCC--CCCeEEECCCCEEEeCEEeeeECCCccccccccccCHHHHh
Confidence 689999999975432 4799999999999986533 245899999999999999999999653 2221 2233333
Q ss_pred ----------------------HHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeecc-ccccCC---
Q psy10113 95 ----------------------HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALH-VGITWW--- 148 (596)
Q Consensus 95 ----------------------~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~--- 148 (596)
......++.|+||++|+..+... ...+-++.... ...|-+.. +-...|
T Consensus 80 ~~~~~~~~~~r~Gtt~~lPTt~tt~y~ya~mGyTt~~eaa~~p~~--arh~h~e~~~~----p~~d~~~~~~~gnn~~~~ 153 (556)
T TIGR03121 80 RDPEPRTGLTRAGSGFSVPSTYATGYRYARMGYTTVFEAAVPPLN--ARHTHEEFADT----PILDKGGYTLLGNNWFLL 153 (556)
T ss_pred hcchhhhhhcCCCcceEehhHhHHHHHHHhCCccEEecCCCCccc--hhhhHHHhccC----ccccccceEEecchHHHH
Confidence 22345678999999998765432 22222322221 12221111 111111
Q ss_pred ---ChhHHHHHHHHHHH----cCCCEEEEEe----------------e-cCCCccCCHHHHH-HHHHHHHhcCCeEEEe-
Q psy10113 149 ---SDQVQQEMAELCEK----HGVNSFKTFM----------------A-YKGLYMLSDGELY-DAFSAIKNLGAIAMVH- 202 (596)
Q Consensus 149 ---~~~~~~e~~~lv~~----~Gv~~~k~~~----------------~-~~~~~~~~~~~l~-~~~~~a~~~g~~~~vH- 202 (596)
.+...+++..++.+ ...-.+|+.- + ..-.+.+++.++. .+.+...++|++-.+|
T Consensus 154 ~~~~~~~~~~~~~~vaw~l~~tk~~giK~vnpgG~~a~~~~~~~~~~d~~~~~~~vtp~~i~~~l~~~~e~l~lph~~h~ 233 (556)
T TIGR03121 154 EYLKDGEPEKAAAYVAWLLKATKGYGIKVVNPGGVEAWGWGENVLSLDDPVPYFGITPREIIKGLARANEELGLPHSIHV 233 (556)
T ss_pred HHHhcCCHHHHHHHHHHHHHhccceEEEEECCCchhhhccCCccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEE
Confidence 11122333333322 1222233321 1 1112567777654 5556666789875555
Q ss_pred -cCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCC------eEEEecC-------c----HHH
Q psy10113 203 -AENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCP------LYVVHIM-------S----KAA 264 (596)
Q Consensus 203 -ae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p------~~i~hv~-------s----~~~ 264 (596)
+.| +|+.| .. +.+...+.+++ |.+ +|++|++ + ...
T Consensus 234 H~nn-------------lg~pg----------n~--~~t~~t~~~~~--g~~~~~~~~~h~tH~qf~syg~~~~~~f~s~ 286 (556)
T TIGR03121 234 HCNN-------------LGVPG----------NY--ETTLDTLDAAE--GVKPNRNQVLHLTHVQFHSYGGTSWRDFESG 286 (556)
T ss_pred ecCC-------------CCCCC----------ch--HHHHHHHHHhc--CCCCCccceeEeeeeeeeccCCCCCCCcchh
Confidence 444 23332 11 22233444443 555 8999996 1 223
Q ss_pred HHHHHHHHHH----HhhcCCceeeEEeeccceee----cCCCCCCC-cccccc-----ccccCCCCC-CCCCcHHHHHH-
Q psy10113 265 GDAMAYKRKE----LMKKGKHCTLYGETLAAAVG----THANQIPC-TWHDQA-----AHVLSPPLR-PDETTPTHLLT- 328 (596)
Q Consensus 265 ~~~i~~a~~~----~~~~G~~~~v~~e~~~~~l~----~~~~~~~~-~~~~~~-----~~~~~Pplr-~~~~~~~~l~~- 328 (596)
++.|..+-.+ .++-|. ..++|++....- .+...+.. +|.... +.... |+. .+++...+|.-
T Consensus 287 a~~~a~~vn~~~~~t~d~Gq--v~fg~t~tmt~d~~~~~~~~~~~~~kw~~~d~e~e~g~gvv-p~~y~~~~~v~~~qwa 363 (556)
T TIGR03121 287 AEKIADYVNANPNVTIDVGQ--VTFGETTTMTADGPMEYDLHKLTGLKWANKDVELETGSGVV-PFKYSPKNPVHALQWA 363 (556)
T ss_pred HHHHHHHHhcCCCEEEEeCc--eecCCceEEeccchhhhhcccCCCCceeeeeeecccCCceE-EeeecCCCcchHHHHH
Confidence 3333433322 011133 444554432210 00111111 143211 11122 332 11222222211
Q ss_pred ------HHhcC-CccEEeCCCC---CCChhhhhhCCCCCCcCCCCCcchHHHHHHH---HH----h---hccCCCCCHHH
Q psy10113 329 ------LLNEN-ALQTTGSDNC---TFNKNQKELGKDSFTHIPNGVNGVQDRLSVI---WE----K---GVVPGILSPEK 388 (596)
Q Consensus 329 ------~l~~G-~~~~~gsD~~---~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~---~~----~---~v~~~~l~~~e 388 (596)
+|..+ -.+.+.|||. ||......+.. .-.-..|...+ .. + .-....++++|
T Consensus 364 iglel~Ll~~dp~~~~~ttDhPnggpf~~YP~ii~~---------lm~~~~r~~~~~~~~~~~~~~~~l~~~~Re~sL~E 434 (556)
T TIGR03121 364 IGLELFLLIKDPWRVFLTTDHPNGGPFTRYPRIIAL---------LMSRKYREDMLSTVHPWAAARSTLGGIDREYSLYE 434 (556)
T ss_pred HhhHHHHhcCCcceeEEeccCCCCCcccchHHHHHH---------HcCHHHHHHHHHhcCHHHHhhcccccccCCCCHHH
Confidence 22223 3788999984 44332211000 00001111111 11 0 11346789999
Q ss_pred HHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCce
Q psy10113 389 FVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNL 468 (596)
Q Consensus 389 ~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~ 468 (596)
+++++|.||||+||+ +++|+|++|++|||+|||.+.....+ .+..++ ...+.+.+||++|++|++||++
T Consensus 435 I~~mtTanPAkaLGL-~dkG~L~pGa~ADIaI~D~~~~~~~~--------~~~~v~--~~~~~v~~Tik~G~vV~~dGei 503 (556)
T TIGR03121 435 IAIMTRAGPAKLLGL-TDRGHLGVGADADIAVYDINPDDVDT--------DYADVE--KAFSTALYVFKDGEIVVKDGEI 503 (556)
T ss_pred HHHHHHHHHHHHhCC-CCCCCcCCCCcCCEEEEeCcccccCC--------chHHHh--hccCCccEEEECCEEEEECCEE
Confidence 999999999999999 46899999999999999987543311 122222 2235689999999999999999
Q ss_pred eecCCCCeeecCCCC
Q psy10113 469 RVAQGQGNYLPTHTN 483 (596)
Q Consensus 469 ~~~~g~g~~~~~~~~ 483 (596)
.... .|+++-..+.
T Consensus 504 ~~~~-~G~~~~~~~~ 517 (556)
T TIGR03121 504 VETP-WGRTYWVDAK 517 (556)
T ss_pred ccCC-CCcEEEEecc
Confidence 7654 7888765543
No 94
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.95 E-value=5.2e-26 Score=239.18 Aligned_cols=296 Identities=19% Similarity=0.157 Sum_probs=173.6
Q ss_pred CeEEEcCCCEEeeCccccccCCCccccCCCC----cchHH-----HHHHHHHhCCceEEeccccCCCCccHHHHHHHHHH
Q psy10113 59 VRVIDAAGSYVIPGGIDPHTHFELELMGATS----VDDFY-----HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQ 129 (596)
Q Consensus 59 ~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~----~d~~~-----~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~ 129 (596)
+++||++|++|||||||+|+|+..+...... .+++. ..++.+|++|||||+|+....... +.++++....
T Consensus 1 ~~vID~~g~~v~PGliD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~g~~~~~~-~~~~~~~g~~ 79 (342)
T cd01299 1 AQVIDLGGKTLMPGLIDAHTHLGSDPGDLPLDLALPVEYRTIRATRQARAALRAGFTTVRDAGGADYGL-LRDAIDAGLI 79 (342)
T ss_pred CcEEeCCCCEECCCeeeeeeeccccCCCccccccCCHHHHHHHHHHHHHHHHhCCCcEEEeCCCcchHH-HHHHHHcCCc
Confidence 4689999999999999999998654321111 12222 568889999999999986543222 2222222111
Q ss_pred -----------HhccCceeeeec---------cccccCCChhHHHHHHHHHHHcCCCEEEEEeecCC--------CccCC
Q psy10113 130 -----------KADEKVCCDYAL---------HVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKG--------LYMLS 181 (596)
Q Consensus 130 -----------~~~~~~~~~~~~---------~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~--------~~~~~ 181 (596)
....+..+++.+ +.......++..++++++++ .|++.+|+|+.+.. ...++
T Consensus 80 ~gPr~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~G~~~iK~~~~g~~~~~~~~~~~~~~~ 158 (342)
T cd01299 80 PGPRVFASGRALSQTGGHGDPRGLSGLFPAGGLAAVVDGVEEVRAAVREQLR-RGADQIKIMATGGVLSPGDPPPDTQFS 158 (342)
T ss_pred cCCceeecchhhcccCCCCccccccccccccCCcceecCHHHHHHHHHHHHH-hCCCEEEEeccCCcCCCCCCCcccCcC
Confidence 111112223221 11122334456667777775 59999999986421 13578
Q ss_pred HHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCc
Q psy10113 182 DGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMS 261 (596)
Q Consensus 182 ~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s 261 (596)
++++.++++.|+++|+++.+|+.+.. ..+.+++.|+...+|.....+
T Consensus 159 ~e~l~~~~~~A~~~g~~v~~H~~~~~----~i~~~l~~G~~~i~H~~~~~~----------------------------- 205 (342)
T cd01299 159 EEELRAIVDEAHKAGLYVAAHAYGAE----AIRRAIRAGVDTIEHGFLIDD----------------------------- 205 (342)
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCCEEeecCCCCH-----------------------------
Confidence 99999999999999999999998743 333444555554444333322
Q ss_pred HHHHHHHHHHHHHHhhcCCceeeEEeeccceeec----CCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccE
Q psy10113 262 KAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGT----HANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQT 337 (596)
Q Consensus 262 ~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~----~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~ 337 (596)
+.++++++. |+ .+. +++..... .....+..+....... .+ ......+..+++.|+.++
T Consensus 206 ----~~~~~l~~~----g~--~~~--~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~l~~~Gv~v~ 267 (342)
T cd01299 206 ----ETIELMKEK----GI--FLV--PTLATYEALAAEGAAPGLPADSAEKVAL----VL--EAGRDALRRAHKAGVKIA 267 (342)
T ss_pred ----HHHHHHHHC----Cc--EEe--CcHHHHHHHHhhccccCCCHHHHHHHHH----HH--HHHHHHHHHHHHcCCeEE
Confidence 223333333 44 221 11111000 0000111000000000 00 112355668899999999
Q ss_pred EeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCcc
Q psy10113 338 TGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDAD 417 (596)
Q Consensus 338 ~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~AD 417 (596)
+|||....+.... .+...+.. ++ ..++++.++++++|.|+|++||+++++|+|++|+.||
T Consensus 268 ~GTD~~~~~~~~~---------------~~~~e~~~----~~-~~~~~~~~al~~~T~~~a~~~g~~~~~G~i~~G~~AD 327 (342)
T cd01299 268 FGTDAGFPVPPHG---------------WNARELEL----LV-KAGGTPAEALRAATANAAELLGLSDELGVIEAGKLAD 327 (342)
T ss_pred EecCCCCCCCchh---------------HHHHHHHH----HH-HhCCCHHHHHHHHHHHHHHHhCccCCcceECCCCcCC
Confidence 9999753111000 00111111 12 2457999999999999999999988899999999999
Q ss_pred EEEEcCCcce
Q psy10113 418 IVVWNYKAKR 427 (596)
Q Consensus 418 lVi~d~~~~~ 427 (596)
|||||.+...
T Consensus 328 lvvl~~~pl~ 337 (342)
T cd01299 328 LLVVDGDPLE 337 (342)
T ss_pred EEEECCChhh
Confidence 9999987443
No 95
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.94 E-value=6.7e-26 Score=237.80 Aligned_cols=296 Identities=20% Similarity=0.154 Sum_probs=186.6
Q ss_pred eEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCC
Q psy10113 38 DIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKG 117 (596)
Q Consensus 38 dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~ 117 (596)
||+|+||+|++|+++...+.+.++||++|++|+|||||+|+|+..+.. ++..+++++|+++|+||++|+..+..
T Consensus 1 ~i~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~iD~H~H~~~~g~-----~~~~~~~~~a~~~GvTtvvd~~~~~~- 74 (338)
T cd01307 1 DVAIENGKIAAVGAALAAPAATQIVDAGGCYVSPGWIDLHVHVYQGGT-----RYGDRPDMIGVKSGVTTVVDAGSAGA- 74 (338)
T ss_pred CEEEECCEEEEccCCCCCCCCCeEEECCCCEEecCeEEeeecCCCCCc-----ccCCCHhHHHHcCceeEEEeCCCCCC-
Confidence 689999999999986554445789999999999999999999987643 12234788999999999999974333
Q ss_pred ccHHHH-HHHHHHHhcc--CceeeeeccccccC--CCh---hHHHHHHHHHHH--cCCCEEEEEeecCCCccCCHHHHHH
Q psy10113 118 ESLIKT-YESWRQKADE--KVCCDYALHVGITW--WSD---QVQQEMAELCEK--HGVNSFKTFMAYKGLYMLSDGELYD 187 (596)
Q Consensus 118 ~~~~~a-~~~~~~~~~~--~~~~~~~~~~~~~~--~~~---~~~~e~~~lv~~--~Gv~~~k~~~~~~~~~~~~~~~l~~ 187 (596)
...+. ++...+.+.. .+.++|+++..... +.+ ...+++.+++++ .|+.+||.++............+.+
T Consensus 75 -~~~~~~~~~~~~~~~~~v~a~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~e~~~gi~gik~~~~~~~~~~~~~~~l~~ 153 (338)
T cd01307 75 -DNIDGFRYTVIERSATRVYAFLNISRVGLVAQDELPDPDNIDEDAVVAAAREYPDVIVGLKARASKSVVGEWGIKPLEL 153 (338)
T ss_pred -CCHHHHHHHHHHhhhceEEEEEeeeccccccccccCChhHCCHHHHHHHHHHCcCcEEEEEEEeecccccccCCcHHHH
Confidence 33343 4444344444 45667777654322 111 123344444433 4889999998755433334445889
Q ss_pred HHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHH---
Q psy10113 188 AFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAA--- 264 (596)
Q Consensus 188 ~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~--- 264 (596)
.++.++++|+++.+|+++...-..... .. .. .+ ..++|+.+...
T Consensus 154 ~~~~a~~~~~pi~vH~~~~~~~~~~~~---------------------------~~---l~-~g--~~~~H~~~g~~~~~ 200 (338)
T cd01307 154 AKKIAKEADLPLMVHIGSPPPILDEVV---------------------------PL---LR-RG--DVLTHCFNGKPNGI 200 (338)
T ss_pred HHHHHHHcCCCEEEEeCCCCCCHHHHH---------------------------HH---hc-CC--CEEEeccCCCCCCC
Confidence 999999999999999987542111111 11 11 11 13445444221
Q ss_pred -------HHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCC-cc
Q psy10113 265 -------GDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENA-LQ 336 (596)
Q Consensus 265 -------~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~-~~ 336 (596)
.+.+.++.++ |+ . ..+. . +.... ......++++.|. ..
T Consensus 201 ~~~~~~~~~~~~~~~~~----G~--~--~d~~-----~-G~~~~--------------------~~~~~~~l~~~G~~~~ 246 (338)
T cd01307 201 VDEEGEVLPLVRRARER----GV--I--FDVG-----H-GTASF--------------------SFRVARAAIAAGLLPD 246 (338)
T ss_pred CCCCCcHHHHHHHHHhC----CE--E--EEeC-----C-CCCch--------------------hHHHHHHHHHCCCCCe
Confidence 2334444444 65 1 1100 0 10000 0122335667786 46
Q ss_pred EEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCc
Q psy10113 337 TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDA 416 (596)
Q Consensus 337 ~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~A 416 (596)
.+++|...... . ++-...+..+++++ ...+++++++++++|.|||++|++ +++|+|++|+.|
T Consensus 247 ~lstD~~~~~~---------~-------~~p~~~l~~~l~~l-~~~gi~~ee~~~~~T~NpA~~lgl-~~~G~l~~G~~a 308 (338)
T cd01307 247 TISSDIHGRNR---------T-------NGPVYALATTLSKL-LALGMPLEEVIEAVTANPARMLGL-AEIGTLAVGYDA 308 (338)
T ss_pred eecCCccccCC---------C-------CCccccHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHcCC-CCCCccCCCCcC
Confidence 78888732110 0 11122334444444 235799999999999999999999 779999999999
Q ss_pred cEEEEcCCc
Q psy10113 417 DIVVWNYKA 425 (596)
Q Consensus 417 DlVi~d~~~ 425 (596)
||++|+.+.
T Consensus 309 d~~v~~~~~ 317 (338)
T cd01307 309 DLTVFDLKD 317 (338)
T ss_pred CEEEEeCCC
Confidence 999999774
No 96
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=99.94 E-value=3.6e-25 Score=234.71 Aligned_cols=329 Identities=24% Similarity=0.338 Sum_probs=210.9
Q ss_pred ccccEEEEccEEEcC--CCceeeeEEEECCeEEE-eccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchH
Q psy10113 17 SQNRLLIKNGKVVNA--DKISDLDIYIENGVIQQ-LGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDF 93 (596)
Q Consensus 17 ~~~~llIkng~Iv~~--d~~~~~dV~IedG~I~~-Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~ 93 (596)
+..+++++||+|+|. ...+.+||.|.+|+|+. +++.. .++.++||+.|++|.|||||.|.|+..+ .+++..|
T Consensus 22 ~~adlv~~ng~ivdv~~gei~~~dIaI~~grI~~v~~~~~--~e~~~~iDa~g~yivPGfID~H~HIESS---m~tP~~F 96 (584)
T COG1001 22 AKADLVLKNGRIVDVVTGEIYKGDIAIAGGRIVGVIGEYR--AEATEVIDAAGRYIVPGFIDAHLHIESS---MLTPSEF 96 (584)
T ss_pred CCCCEEEECCEEEEeeeccEEeeeEEEECCEEEEeecCcC--cccceeecCCCCEeccceeecceecccc---ccCHHHH
Confidence 457899999999986 45678999999999999 55433 4588999999999999999999999765 4567777
Q ss_pred HHHHHHHHhCCceEEecc-c--cCCCCcc-HHHHHHHHHHHhccCceeeeeccccccCCCh----hHHHHHHHHHHHcCC
Q psy10113 94 YHGTKAAVAGGTTTIIDF-A--LPRKGES-LIKTYESWRQKADEKVCCDYALHVGITWWSD----QVQQEMAELCEKHGV 165 (596)
Q Consensus 94 ~~g~~~al~~GtTti~D~-~--~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~e~~~lv~~~Gv 165 (596)
+++.+..||||++-- . ..-.|.. ..-.++..++. ..+..+.....+..+.+.. =..+++.++..+..+
T Consensus 97 ---A~~Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~~-pl~~~~~~pScVPat~~Et~Ga~l~a~~i~e~~~~p~V 172 (584)
T COG1001 97 ---ARAVLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKET-PLKVYVMLPSCVPATPFETSGAELTAEDIKELLEHPEV 172 (584)
T ss_pred ---HHHhhccCceEEeeCcHHHHhhccHHHHHHHHHHHhhC-CeEEEEecccCccCCccccCCceecHHHHHHHhhCCCc
Confidence 788899999999621 0 0011111 22223333221 1111111111111111111 134577788777788
Q ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHH
Q psy10113 166 NSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACT 245 (596)
Q Consensus 166 ~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~ 245 (596)
-++..+|.|.+... .|+++...++.+++.|.++..|+..-. ......+...|+.. .|+..++||+- .+ +
T Consensus 173 igl~E~Mn~pgVi~-~D~~~l~kl~a~~~~~k~VdGHapgl~--g~~Ln~Y~aaGi~t--DHE~~t~EEa~----~k-l- 241 (584)
T COG1001 173 IGLGEMMNFPGVIE-GDPDMLAKLEAARKAGKPVDGHAPGLS--GKELNAYIAAGIST--DHESTTAEEAL----EK-L- 241 (584)
T ss_pred cchhhhcCCchhcc-CCHHHHHHHHHHHHcCCeecccCCCCC--hHHHHHHHhcCCCc--CcccCCHHHHH----HH-H-
Confidence 88888999888764 566777788999999999999987643 33455556666654 34444444331 11 0
Q ss_pred HhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHH
Q psy10113 246 IANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTH 325 (596)
Q Consensus 246 la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~ 325 (596)
+.|..+.+-+-+... +...
T Consensus 242 ---r~Gm~i~iReGS~a~----------------------------------------------------------dl~~ 260 (584)
T COG1001 242 ---RLGMKIMIREGSAAK----------------------------------------------------------DLAA 260 (584)
T ss_pred ---hCCcEEEEEcCchhh----------------------------------------------------------hHHH
Confidence 112222222222111 1222
Q ss_pred HHHHHhc-C-CccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCC
Q psy10113 326 LLTLLNE-N-ALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNL 403 (596)
Q Consensus 326 l~~~l~~-G-~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl 403 (596)
+...+.. | ..+++.||....+.-.. +..|..+.++++ ..++++.++++|+|.|||+.|||
T Consensus 261 l~~~i~e~~~~~~~lcTDD~~p~dl~~-----------------eGhld~~vR~Ai-~~Gv~p~~a~qmAtiN~A~~~gl 322 (584)
T COG1001 261 LLPAITELGSRRVMLCTDDRHPDDLLE-----------------EGHLDRLVRRAI-EEGVDPLDAYQMATINPAEHYGL 322 (584)
T ss_pred HHHHHhhcCCceEEEECCCCChhHhhh-----------------cCCHHHHHHHHH-HcCCCHHHHHHHHhcCHHHHcCC
Confidence 2233322 2 34677777644332111 223344444444 45689999999999999999999
Q ss_pred CCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCce
Q psy10113 404 YPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNL 468 (596)
Q Consensus 404 ~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~ 468 (596)
+ +.|.|+||..||||+++.-.. + ++..|+++|++|.++|+-
T Consensus 323 ~-~~G~iAPG~~ADlvi~~DL~~--~---------------------~v~~V~~~G~~v~~~g~~ 363 (584)
T COG1001 323 D-DLGLIAPGRRADLVILEDLRN--F---------------------KVTSVLIKGRVVAEDGKA 363 (584)
T ss_pred c-ccccccCCccccEEEEccccc--C---------------------ceeEEEECCEEEecCCce
Confidence 5 499999999999999984311 1 568999999999999973
No 97
>PRK06846 putative deaminase; Validated
Probab=99.94 E-value=1.2e-24 Score=234.02 Aligned_cols=339 Identities=12% Similarity=0.097 Sum_probs=190.9
Q ss_pred CceeeeEEEECCeEEEeccCCCC-CCCCeEEEcCCCEEeeCccccccCCCccccCCCCc---------------------
Q psy10113 33 KISDLDIYIENGVIQQLGRNLIV-PGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSV--------------------- 90 (596)
Q Consensus 33 ~~~~~dV~IedG~I~~Ig~~~~~-~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~--------------------- 90 (596)
.....+|.|+||+|++|++.... +.+.++||++|++|+|||||+|+|+..++......
T Consensus 28 ~~~~~~i~i~~g~I~~i~~~~~~~~~~~~~id~~g~~v~Pg~iD~H~H~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~ 107 (410)
T PRK06846 28 ETALCTLEIQDGKIVAIRPNKQVPDATLPTYDANGLLMLPAFREMHIHLDKTYYGGPWKACRPAKTIQDRIELEQKELPE 107 (410)
T ss_pred ceeeEEEEEECCEEEEeecCCCCCCCCCceEeCCCCEEecCEEeeeecccchhhccchhhcCCcccHHHHHhhhhhhHHH
Confidence 34568999999999999985332 23568999999999999999999997654221110
Q ss_pred --chHH----HHHHHHHhCCceEEeccccCCCC--ccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHH
Q psy10113 91 --DDFY----HGTKAAVAGGTTTIIDFALPRKG--ESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEK 162 (596)
Q Consensus 91 --d~~~----~g~~~al~~GtTti~D~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~ 162 (596)
.+.. .....+++.|+|++++++...+. ....+++.+..+........................+.+++..+
T Consensus 108 ~~~~~~~~a~~~l~~~~~~Gtt~~r~~v~~~~~~~~~~~~a~~e~l~e~~~~v~~~~~a~~~~g~~~~~~~~lL~~al~- 186 (410)
T PRK06846 108 LLPTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYKDGFTYEIVAFPQHGLLRSNSEPLMREAMK- 186 (410)
T ss_pred hHHHHHHHHHHHHHHHHhCCccEEEEEEeeCcccccchHHHHHHHHHHhhCcceEEEEeccCcccCCccHHHHHHHHHH-
Confidence 0111 22334567899999888743322 11122222211111111111111111100011223344555554
Q ss_pred cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHH
Q psy10113 163 HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTR 242 (596)
Q Consensus 163 ~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~ 242 (596)
.|...++. +.+......+.+++.++++.|+++|+++.+|..+... +.. ..+.+
T Consensus 187 ~Ga~~i~g-l~p~~~~~~~~~~l~~~~~lA~~~g~~v~~Hv~e~~~--~~~------------------------~~~~~ 239 (410)
T PRK06846 187 MGAHLVGG-VDPASVDGAIEKSLDTMFQIAVDFNKGVDIHLHDTGP--LGV------------------------ATIKY 239 (410)
T ss_pred cCCCEEeC-CCCccCCcCHHHHHHHHHHHHHHhCCCcEEEECCCCC--hhH------------------------HHHHH
Confidence 47765442 2333444567889999999999999999999754220 000 11111
Q ss_pred HHHHhcccC--CCeEEEecCc------HHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCC
Q psy10113 243 ACTIANQVD--CPLYVVHIMS------KAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSP 314 (596)
Q Consensus 243 ~i~la~~~~--~p~~i~hv~s------~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~P 314 (596)
.+....+.+ -++.+.|+.. .+...+++.+++. |+ .|..- + + .....+
T Consensus 240 ~~~~~~~~gl~~~v~~~H~~~l~~~~~~e~~~li~~la~~----g~--~v~~~-----~--------~------~~~g~~ 294 (410)
T PRK06846 240 LVETTEEAQWKGKVTISHAFALGDLNEEEVEELAERLAAQ----GI--SITST-----V--------P------IGRLHM 294 (410)
T ss_pred HHHHHHHhCCCCCEEEEecchhhcCCHHHHHHHHHHHHHc----CC--eEEEe-----C--------C------CCCCCC
Confidence 222222222 2788888863 2333345556666 87 43210 0 0 000112
Q ss_pred CCCCCCCcHHHHHHHHhcCCccEEeCCCCC--CChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHH
Q psy10113 315 PLRPDETTPTHLLTLLNENALQTTGSDNCT--FNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAV 392 (596)
Q Consensus 315 plr~~~~~~~~l~~~l~~G~~~~~gsD~~~--~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~ 392 (596)
| +.+++++|+.+++|||... ++ |+|...+-..|.......-........+++++
T Consensus 295 p----------~~~l~~~Gv~v~lGtD~~~~~~~--------------p~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (410)
T PRK06846 295 P----------IPLLHDKGVKVSLGTDSVIDHWS--------------PFGTGDMLEKANLLAELYRWSDERSLSRSLAL 350 (410)
T ss_pred C----------HHHHHhCCCeEEEecCCCCCCCc--------------CCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 3 3478999999999999742 22 11111122222222110001111234578999
Q ss_pred HhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEEC
Q psy10113 393 TSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE 465 (596)
Q Consensus 393 ~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~d 465 (596)
+|.+ |+.++++..+|+|++|+.|||||||.+.+..+. .....+..||++||+||..
T Consensus 351 ~T~~-a~~l~~~~~~G~l~~G~~ADlvlld~~~~~~~~----------------~~~~~v~~v~~~G~~v~~~ 406 (410)
T PRK06846 351 ATGG-VLPLNDEGERVWPKVGDEASFVLVDASCSAEAV----------------ARQSPRTAVFHKGQLVAGS 406 (410)
T ss_pred HcCC-ccccccCCCccCCCCCCcccEEEEeCCChHHHH----------------HhcCCceEEEECCEEEeee
Confidence 9988 456888778899999999999999986421111 1113578999999999975
No 98
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.94 E-value=8.2e-25 Score=232.49 Aligned_cols=340 Identities=14% Similarity=0.113 Sum_probs=192.4
Q ss_pred CeEEEeccCCCC---CCCCeEEEcCCCEEeeCccccccCCCccccC--------------------CCCcchHHH----H
Q psy10113 44 GVIQQLGRNLIV---PGGVRVIDAAGSYVIPGGIDPHTHFELELMG--------------------ATSVDDFYH----G 96 (596)
Q Consensus 44 G~I~~Ig~~~~~---~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~--------------------~~~~d~~~~----g 96 (596)
|+|++||+.... .++.++||+.|++|||||||+|+|+.+..+. ..+.++.+. +
T Consensus 1 ~~I~aVG~~~~~~~~~~~~~v~d~~g~~v~PGlVnaH~H~~~~~~rg~~~~~~~~~wl~~~~~~~~~~~~e~~~~~a~~~ 80 (381)
T cd01312 1 DKILEVGDYEKLEKRYPGAKHEFFPNGVLLPGLINAHTHLEFSANVAQFTYGRFRAWLLSVINSRDELLKQPWEEAIRQG 80 (381)
T ss_pred CeEEEECChHHHHhhcCCCeEEecCCcEEecCccccccccchhccccccCCCchHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence 689999974322 1357899999999999999999999554321 122333333 4
Q ss_pred HHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc-cc--cCCChhHHHHHHHHHHH--cCCCEEEEE
Q psy10113 97 TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV-GI--TWWSDQVQQEMAELCEK--HGVNSFKTF 171 (596)
Q Consensus 97 ~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~e~~~lv~~--~Gv~~~k~~ 171 (596)
+..++++||||+.|+.... ...+++ .+ .+.+..++... +. ..+.....+.++..... .....++..
T Consensus 81 ~~E~l~~G~Tt~~d~~~~~---~~~~a~---~~---~GiR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 151 (381)
T cd01312 81 IRQMLESGTTSIGAISSDG---SLLPAL---AS---SGLRGVFFNEVIGSNPSAIDFKGETFLERFKRSKSFESQLFIPA 151 (381)
T ss_pred HHHHHHhCCeEEEEecCCH---HHHHHH---HH---cCCcEEEEEeeECCCCchhhhhHHHHHHHHHHhhccCccceEEE
Confidence 4456889999999986331 122222 22 22232222111 11 11111111122222111 122346778
Q ss_pred eecCCCccCCHHHHHHHHHHHHhcCCeEEEecCch-hhhHHHHHH------HHHcCCCCCCcc-cCCChHHHHHHHHHHH
Q psy10113 172 MAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENG-EIIDKNTQK------LLAAGIKGPEGH-QLSRPEEVEAEAVTRA 243 (596)
Q Consensus 172 ~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~-~~i~~~~~~------l~~~Gi~~~~~~-~~~~p~~~e~~a~~~~ 243 (596)
++++..+.++++.+.++++.|+++|+++++|..+. ..+....+. +.+. ....... ...+|- + .
T Consensus 152 ~~p~a~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~-~~~~~~~~~g~~pv----~----~ 222 (381)
T cd01312 152 ISPHAPYSVHPELAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFWES-FLKLPKPKKLATAI----D----F 222 (381)
T ss_pred ECCCCCcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHHHHHHHhccchhhHhhh-hcccccccCCCCHH----H----H
Confidence 88888889999999999999999999999997543 211111100 0000 0000000 011121 1 1
Q ss_pred HHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceee-EEeeccceeecCCCCCCCccccccccccCCCCCCCCCc
Q psy10113 244 CTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTL-YGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETT 322 (596)
Q Consensus 244 i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v-~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~ 322 (596)
+.-....+-++.+.|+..-.. +.++..++. |+ .+ ++......+ +. ..+|
T Consensus 223 l~~~g~L~~~~~~~H~~~l~~-~~~~~l~~~----g~--~v~~~P~sn~~l-------------g~---g~~p------- 272 (381)
T cd01312 223 LDMLGGLGTRVSFVHCVYANL-EEAEILASR----GA--SIALCPRSNRLL-------------NG---GKLD------- 272 (381)
T ss_pred HHHcCCCCCCcEEEECCcCCH-HHHHHHHHc----CC--eEEECcchhhhh-------------cC---CCcC-------
Confidence 122234456778888875442 344555656 76 33 222211110 00 1123
Q ss_pred HHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcC
Q psy10113 323 PTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFN 402 (596)
Q Consensus 323 ~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lg 402 (596)
+.++++.|+.+++|||....+....++ -++++...+.+... ..+++.++++++|.|+|++||
T Consensus 273 ---~~~~~~~Gv~v~lGtD~~~~~~~~d~~--------------~~~~~~~~~~~~~~-~~~~~~~~l~~aT~~gA~alg 334 (381)
T cd01312 273 ---VSELKKAGIPVSLGTDGLSSNISLSLL--------------DELRALLDLHPEED-LLELASELLLMATLGGARALG 334 (381)
T ss_pred ---HHHHHHCCCcEEEeCCCCccCCCCCHH--------------HHHHHHHHhccccc-ccCCHHHHHHHHHHHHHHHhC
Confidence 337899999999999975433221111 03444333332211 136789999999999999999
Q ss_pred CCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCE
Q psy10113 403 LYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGR 460 (596)
Q Consensus 403 l~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~Gr 460 (596)
++ .|+|++||.||||+||.+.+. .+ ..+|..-....+.|.+||++||
T Consensus 335 ~~--~Gsle~Gk~ADlvv~d~~~~~-~~--------~~~~~~~~~~~~~v~~v~v~G~ 381 (381)
T cd01312 335 LN--NGEIEAGKRADFAVFELPGPG-IK--------EQAPLQFILHAKEVRHLFISGK 381 (381)
T ss_pred CC--CCccCCCCcccEEEEeCCCcC-CC--------CccHHHHHHccCCCCEEEecCC
Confidence 94 899999999999999988651 11 1122222223457999999996
No 99
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.93 E-value=3.1e-24 Score=207.82 Aligned_cols=314 Identities=20% Similarity=0.230 Sum_probs=197.7
Q ss_pred cccEEEEccEEEcCCCc--eeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccC-CCCcchHH
Q psy10113 18 QNRLLIKNGKVVNADKI--SDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG-ATSVDDFY 94 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~--~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~-~~~~d~~~ 94 (596)
+.++|++|++++++... .-.+|.|.||||++++ ..+.|...++|||+|++|.||+||.|+|..+.... ...+|
T Consensus 3 qfdiLLt~~rlidpa~g~d~~tniai~ngkIaa~~-d~~apa~tq~Ida~Gc~VspG~iDlHvHvy~ggt~~~v~pd--- 78 (386)
T COG3964 3 QFDILLTGGRLIDPARGIDEITNIAIINGKIAAAD-DYPAPAETQIIDADGCIVSPGLIDLHVHVYYGGTEGGVRPD--- 78 (386)
T ss_pred ccceeeeCCeecccccccCccceeeeecCeEEecc-CcCCChhheEEccCccEeccCeeeeeeEEecCCCccCcCHH---
Confidence 57899999999987433 3489999999999999 78888889999999999999999999998654221 12222
Q ss_pred HHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhcc--CceeeeeccccccCCCh------hHHHHHHHHHHHcC--
Q psy10113 95 HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADE--KVCCDYALHVGITWWSD------QVQQEMAELCEKHG-- 164 (596)
Q Consensus 95 ~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~e~~~lv~~~G-- 164 (596)
..+...||||++|......+ ....-|+...+.... ++..+.+. .+..+.++ -..+++.++++++-
T Consensus 79 ---~~ga~~GvTTvVDAGSaGaa-nf~gF~r~vie~Sr~RI~Aflnvs~-~Gl~a~nE~~d~~nid~d~i~aa~reh~d~ 153 (386)
T COG3964 79 ---MYGAPNGVTTVVDAGSAGAA-NFDGFYRTVIEASRVRIKAFLNVSP-PGLTASNELYDPDNIDEDKIHAAFREHRDV 153 (386)
T ss_pred ---HccccCCceEEEecCCcCcc-chhhHHHHhhcchhheeeeeeeccC-cceeeehhhCChhhCCHHHHHHHHHhCcCc
Confidence 33678999999999654332 333333333333222 23333332 22233222 12345666666532
Q ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHH
Q psy10113 165 VNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRAC 244 (596)
Q Consensus 165 v~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i 244 (596)
+.++|+-++-+..-..-..-+...++.++.+++++++|..+......++-..+..|
T Consensus 154 ivGlKvR~s~~~~g~~GitPl~la~~ia~~~klPlmvHigePp~~~dEvlerL~~G------------------------ 209 (386)
T COG3964 154 IVGLKVRVSTEDIGEYGITPLTLALRIANDLKLPLMVHIGEPPVLMDEVLERLRRG------------------------ 209 (386)
T ss_pred EEEEEEEeeeccccccCCchHHHHHHHHhhcCCceEEecCCCCccHHHHHHhccCC------------------------
Confidence 34556666543333333344677788899999999999866433322222222222
Q ss_pred HHhcccCCCeEEEecC----------cHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCC
Q psy10113 245 TIANQVDCPLYVVHIM----------SKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSP 314 (596)
Q Consensus 245 ~la~~~~~p~~i~hv~----------s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~P 314 (596)
+ .++|+. +.......++++.+ |+ .+|..|-...|.
T Consensus 210 ------D---IitHcfngkpn~~l~~dg~vr~~vrra~er----GV-------------~fD~ghG~asfs--------- 254 (386)
T COG3964 210 ------D---IITHCFNGKPNTILTDDGVVRAEVRRARER----GV-------------IFDAGHGRASFS--------- 254 (386)
T ss_pred ------c---eeeeeccCCCCCccccchhHHHHHHHHHhc----ce-------------EEEccCCcceee---------
Confidence 1 123333 23344556667777 77 222222111111
Q ss_pred CCCCCCCcHHHHHHHHhcCC-ccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHH
Q psy10113 315 PLRPDETTPTHLLTLLNENA-LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVT 393 (596)
Q Consensus 315 plr~~~~~~~~l~~~l~~G~-~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~ 393 (596)
-.--..+++.|. +.+++||-..++. ++|-...++.++.+++. -+|++.+.+++.
T Consensus 255 --------f~vAr~aia~GllP~~ISSDlh~~~~----------------~n~Pv~dla~~mSKlla-lgmpl~~Vi~av 309 (386)
T COG3964 255 --------FNVARRAIANGLLPDIISSDLHTITK----------------LNGPVYDLAWIMSKLLA-LGMPLTDVINAV 309 (386)
T ss_pred --------HHHHHHHHhcCCCcceeeccceeeee----------------cCchHHHHHHHHHHHHH-cCCcHHHHHHHH
Confidence 011235778886 6889999654431 12223445555555554 358999999999
Q ss_pred hHhHHHHcCCCCCcccccCCCCccEEEEcCCc
Q psy10113 394 STNAAKIFNLYPKKGVIAEGSDADIVVWNYKA 425 (596)
Q Consensus 394 T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~ 425 (596)
|.|||..+++ +.+|+|+||.+|||+|++...
T Consensus 310 T~npA~~i~l-~~~gtLa~G~~aD~tvf~lk~ 340 (386)
T COG3964 310 THNPAVLIGL-AEIGTLAPGAFADITVFKLKN 340 (386)
T ss_pred hcCHHHHhCc-cccCccCCCcccceEEEEecc
Confidence 9999999999 699999999999999999763
No 100
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.93 E-value=9.6e-24 Score=222.90 Aligned_cols=313 Identities=25% Similarity=0.269 Sum_probs=174.4
Q ss_pred CCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCccccCCC-------------C----cch----HHHHHHHHH
Q psy10113 43 NGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGAT-------------S----VDD----FYHGTKAAV 101 (596)
Q Consensus 43 dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~-------------~----~d~----~~~g~~~al 101 (596)
||||++|+++...+.+.++||++|++|+|||||+|+|++....+.. + ..+ .......++
T Consensus 1 ~gkI~~i~~~~~~~~~~~vid~~g~~v~Pg~id~h~h~~~~~~~~~~~~~d~~e~~~~~~p~~~~~d~~~~~~~~~~~a~ 80 (359)
T cd01309 1 DGKIVAVGAEITTPADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANEETDPVTPHVRAIDGINPDDEAFKRAR 80 (359)
T ss_pred CCEEEEEcCCCCCCCCCeEEeCCCCEEcCcEEecccccCccccCCCcCcCCccccCCCCCceeEeecccCCCCHhHHHHH
Confidence 7999999998777778899999999999999999999976433210 0 001 114567889
Q ss_pred hCCceEEeccccCCCC-----cc-HHHHHHH-HHHHhccCceeeeeccccccC-----CC-----h-h---HHHHHHHHH
Q psy10113 102 AGGTTTIIDFALPRKG-----ES-LIKTYES-WRQKADEKVCCDYALHVGITW-----WS-----D-Q---VQQEMAELC 160 (596)
Q Consensus 102 ~~GtTti~D~~~~~~~-----~~-~~~a~~~-~~~~~~~~~~~~~~~~~~~~~-----~~-----~-~---~~~e~~~lv 160 (596)
++|||++. +.|..+ .+ +++.... +.+.. .+.. ..+++.... .. + . ....+.+.+
T Consensus 81 ~~GvT~~~--v~p~~~~~~gg~~~~i~~~~~~~~~~~-~~~~--~~~~~a~g~~~~~~~~~~~~~p~trmg~~~~lr~~~ 155 (359)
T cd01309 81 AGGVTTVQ--VLPGSANLIGGQGVVIKTDGGTIEDMF-IKAP--AGLKMALGENPKRVYGGKGKEPATRMGVAALLRDAF 155 (359)
T ss_pred hcCceEEE--ecCCCCCcccceEEEEECCCCCHHHhc-ccCC--ceeEEecCCCCcccccccCCCccchHHHHHHHHHHH
Confidence 99999994 333221 11 0000000 00000 0011 111111110 00 0 0 000111111
Q ss_pred ---HHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHH
Q psy10113 161 ---EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEA 237 (596)
Q Consensus 161 ---~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~ 237 (596)
++......+ +..........+..+..+++.++.. .++.+|+.+.
T Consensus 156 ~~a~~y~~~~~~-~~~~~~~~~~~d~~l~~l~~~~~~~-~~v~vHa~~~------------------------------- 202 (359)
T cd01309 156 IKAQEYGRKYDL-GKNAKKDPPERDLKLEALLPVLKGE-IPVRIHAHRA------------------------------- 202 (359)
T ss_pred HHHHHHHHHhhh-hhhcccCCCCCCccHHHHHHHHcCC-eeEEEEeCCH-------------------------------
Confidence 000000000 0000000111333455555555433 7788887652
Q ss_pred HHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCC
Q psy10113 238 EAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLR 317 (596)
Q Consensus 238 ~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr 317 (596)
..+.++++++++.+.++.+.|+... .+.+...++. |+ .+...+.... ...+.. .
T Consensus 203 ~~i~~~l~~~~e~g~~~~i~H~~~~--~~~~~~la~~----gv--~v~~~P~~~~--------~~~~~~---------~- 256 (359)
T cd01309 203 DDILTAIRIAKEFGIKITIEHGAEG--YKLADELAKH----GI--PVIYGPTLTL--------PKKVEE---------V- 256 (359)
T ss_pred HHHHHHHHHHHHcCCCEEEECchhH--HHHHHHHHHc----CC--CEEECccccc--------cccHHH---------h-
Confidence 3355667777778888888898653 4555666666 76 4332221100 000000 0
Q ss_pred CCCCcHHHHHHHHhcC-CccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHh
Q psy10113 318 PDETTPTHLLTLLNEN-ALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTN 396 (596)
Q Consensus 318 ~~~~~~~~l~~~l~~G-~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n 396 (596)
......+..++++| +.++++||+...+.. . +...+..+ ...+++++++++++|.|
T Consensus 257 --~~~~~~~~~l~~aGGv~valgsD~~~~~~~-~--------------------l~~~~~~a-~~~gl~~~~al~~~T~n 312 (359)
T cd01309 257 --NDAIDTNAYLLKKGGVAFAISSDHPVLNIR-N--------------------LNLEAAKA-VKYGLSYEEALKAITIN 312 (359)
T ss_pred --hcchhhHHHHHHcCCceEEEECCCCCccch-h--------------------HHHHHHHH-HHcCCCHHHHHHHHHHH
Confidence 11233455788887 999999998432211 0 11111111 23468999999999999
Q ss_pred HHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEE
Q psy10113 397 AAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCV 463 (596)
Q Consensus 397 ~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~ 463 (596)
||++||+++++|+|++|++|||||||.+ ||+. ..+|..||++|++||
T Consensus 313 ~A~~lg~~~~~G~l~~G~~ADlvv~d~d-----------------pl~~---~~~v~~v~i~G~~v~ 359 (359)
T cd01309 313 PAKILGIEDRVGSLEPGKDADLVVWNGD-----------------PLEP---TSKPEQVYIDGRLVY 359 (359)
T ss_pred HHHHhCCCCCcccCCCCCccCEEEECCC-----------------cccc---cCcccEEEECCEEeC
Confidence 9999999888999999999999999987 2222 246889999999986
No 101
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=99.91 E-value=4.2e-23 Score=202.26 Aligned_cols=347 Identities=21% Similarity=0.212 Sum_probs=210.4
Q ss_pred EEEEccEEEcCCCceeeeEEEECCeEEEeccCCCCCCCCeEEEcCCCEEeeCccccccCCCcccc----CCCCcc--hHH
Q psy10113 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM----GATSVD--DFY 94 (596)
Q Consensus 21 llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~----~~~~~d--~~~ 94 (596)
++|.|++|+..|....+.|.|+||+|..|.+.... ...-||+.|.+++||+||.||-.-..++ +..++- .+.
T Consensus 1 ~~lsnarivl~D~v~~gsv~i~DG~Ia~i~~g~s~--~~~~~d~eGd~LLPGlIeLHtD~lE~~~~PRPgV~wp~~aAi~ 78 (377)
T COG3454 1 MILSNARIVLEDRVVNGSVLIRDGLIADIDEGISP--LAAGIDGEGDYLLPGLIELHTDNLERFMTPRPGVRWPPIAAIL 78 (377)
T ss_pred CccccceEEeecceeeeeEEEecceEeeeccccCc--ccccccCCCCeecccchhhcchhhhcccCCCCCCCCCchHHHH
Confidence 36889999999999999999999999999986542 2457999999999999999994321111 111111 111
Q ss_pred HHHHHHHhCCceEEeccccC----CCC---ccHHHHHHHHHHH-hccCceeeeeccccccCCChhHHHHHHHHHHHcCCC
Q psy10113 95 HGTKAAVAGGTTTIIDFALP----RKG---ESLIKTYESWRQK-ADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVN 166 (596)
Q Consensus 95 ~g~~~al~~GtTti~D~~~~----~~~---~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~ 166 (596)
.--+..++.|+||+.|...- ..+ ..+.+.++...+. +....+.|-.+|....--.....+.+++++...++.
T Consensus 79 ahD~~l~~sGITTv~dal~iGd~~~gg~r~~~~~~midaI~~~~~~g~lradHr~HlRcEvs~~~~l~~~e~~~~~p~v~ 158 (377)
T COG3454 79 AHDAQLAASGITTVLDALAIGDVRDGGLRLENLRKMIDAIEEAQAAGRLRADHRLHLRCEVSHPATLPLFEDLMDHPRVK 158 (377)
T ss_pred HhhHHHHhcChhhHHhhhhcCcccCCccchHHHHHHHHHHHHHHhccchhhccceeeeeecCChhHHHHHHHHhcCCCee
Confidence 22235578999999987641 111 1233333433332 333466777778777767777888888888765555
Q ss_pred EEEEEee----------------cCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCC
Q psy10113 167 SFKTFMA----------------YKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLS 230 (596)
Q Consensus 167 ~~k~~~~----------------~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~ 230 (596)
.+.+.-- |++.+.++++++.+.+..-..+.... . ..-.......+.+.||....| --.
T Consensus 159 LiSlMDH~PGQrQf~~le~Y~~yy~~k~~~s~~e~~~~i~~r~a~~~~y---~--~~~r~~i~~~c~~rgI~lASH-DDa 232 (377)
T COG3454 159 LISLMDHTPGQRQFANLEKYREYYQGKRGLSDEEFAEFIEERQALSARY---S--DPNRQAIAALCRERGIALASH-DDA 232 (377)
T ss_pred EEEecCCCCCcchhhhHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHhhc---c--cchHHHHHHHHHHcCCceecC-CcC
Confidence 4443211 23335678888777665443322210 0 011222345556666654322 222
Q ss_pred ChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCcccccccc
Q psy10113 231 RPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAH 310 (596)
Q Consensus 231 ~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~ 310 (596)
.++.++ |+....+.++ .+|.. .+.-+.+++. |+ .|.- .+..+...++|.-.
T Consensus 233 T~~hV~-es~~~Gv~iA---EFPtT---------~eAA~asr~~----Gm--~VlM--GAPNivrGgSHsGN-------- 283 (377)
T COG3454 233 TVEHVA-ESHGLGVAIA---EFPTT---------VEAAKASREL----GM--QVLM--GAPNIVRGGSHSGN-------- 283 (377)
T ss_pred cHHHHH-HHHhcCeeEE---eCccH---------HHHHHHHHHh----Cc--hhhc--CCCceeccCCcccc--------
Confidence 233332 3333333333 22221 2333344555 77 3211 11112233333221
Q ss_pred ccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHH
Q psy10113 311 VLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFV 390 (596)
Q Consensus 311 ~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v 390 (596)
-...++...|.+.+++||+.|.+.-+..+ ...-....+++.+++
T Consensus 284 -------------vsA~ela~~glLDiLsSDY~P~SLl~A~F-----------------------~La~~~~~~~lpqAv 327 (377)
T COG3454 284 -------------VSARELAQHGLLDILSSDYVPASLLHAAF-----------------------RLADLGSNISLPQAV 327 (377)
T ss_pred -------------hhHHHHHhCCceeeecccCCcHHHHHHHH-----------------------HHhhhhcccCHHHHH
Confidence 12347788899999999998877554422 011123445899999
Q ss_pred HHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEE
Q psy10113 391 AVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCV 463 (596)
Q Consensus 391 ~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~ 463 (596)
+|+|.|||+++|+. ++|+|++|++||||.+..+.. .| .++.||+.||-|+
T Consensus 328 alvt~nPA~algl~-DRG~Ia~GlrADlv~v~~~~~--------------vp--------~ir~vwr~G~rv~ 377 (377)
T COG3454 328 ALVTKNPARALGLT-DRGRIAPGLRADLVRVRRDGG--------------VP--------VIRTVWRAGKRVA 377 (377)
T ss_pred HHhccCHHHhcCCC-cccccccccccceEEEecCCC--------------Cc--------eeeeeeecceecC
Confidence 99999999999995 899999999999998876622 12 4789999999774
No 102
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=99.91 E-value=2e-23 Score=229.50 Aligned_cols=268 Identities=20% Similarity=0.168 Sum_probs=148.7
Q ss_pred HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHH-----HcCCCEEEE
Q psy10113 96 GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCE-----KHGVNSFKT 170 (596)
Q Consensus 96 g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~-----~~Gv~~~k~ 170 (596)
..+.+++.|||++.|...... ...+++++..+......++.+.+... ..+... ..+...... ...+..+|+
T Consensus 188 ~~~~~~~~GiT~v~d~~~~~~--~~~~~~~~l~~~~~l~~rv~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~vKl 263 (479)
T cd01300 188 AARELASLGVTTVHDAGGGAA--DDIEAYRRLAAAGELTLRVRVALYVS-PLAEDL-LEELGARKNGAGDDRLRLGGVKL 263 (479)
T ss_pred HHHHHHhCCCcEEEcCCCChh--hHHHHHHHHHHCCCCeEEEEEEeccc-cchhhh-hhHHhhhccCCCCCcEEEeeEEE
Confidence 445667899999998754221 12455665555443333333322111 111101 111110000 013455666
Q ss_pred Eee-------------c------CCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCC
Q psy10113 171 FMA-------------Y------KGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSR 231 (596)
Q Consensus 171 ~~~-------------~------~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~ 231 (596)
|++ | .+...++++++.++++.|++.|+++.+|+.+...+....
T Consensus 264 ~~DG~~~~~ta~l~~pY~~~~~~~g~~~~~~e~l~~~~~~a~~~g~~v~~Ha~gd~~i~~~l------------------ 325 (479)
T cd01300 264 FADGSLGSRTAALSEPYLDSPGTGGLLLISPEELEELVRAADEAGLQVAIHAIGDRAVDTVL------------------ 325 (479)
T ss_pred EEcCCCCcccccccCCcCCCCCCCCCccCCHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHH------------------
Confidence 653 1 122457899999999999999999999998754333222
Q ss_pred hHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccc
Q psy10113 232 PEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHV 311 (596)
Q Consensus 232 p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~ 311 (596)
+++..+.......+++..+.|+.... .+.++++++. |+ ..++++.++...+..+...+.......
T Consensus 326 ------~~~~~~~~~~g~~~~r~~i~H~~~~~-~~~~~~l~~~----gv----~~~~~P~~~~~~~~~~~~~~lg~~~~~ 390 (479)
T cd01300 326 ------DALEAALKDNPRADHRHRIEHAQLVS-PDDIPRFAKL----GV----IASVQPNHLYSDGDAAEDRRLGEERAK 390 (479)
T ss_pred ------HHHHHHHHhcCCCCCCceeeecccCC-HHHHHHHHHc----CC----ceEeCcccccCchHHHHHhcccHHHHh
Confidence 22222211112236788899988654 3566777766 65 345666655443322111000001111
Q ss_pred cCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHH
Q psy10113 312 LSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVA 391 (596)
Q Consensus 312 ~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~ 391 (596)
..+| +..+++.|+.+++|||++..... .|..+...+......... ......++++.++++
T Consensus 391 ~~~p----------~~~~~~~Gv~v~lGSD~~~~~~~-------p~~~~~~av~~~~~~~~~---~~~~~~~ls~~~al~ 450 (479)
T cd01300 391 RSYP----------FRSLLDAGVPVALGSDAPVAPPD-------PLLGIWAAVTRKTPGGGV---LGNPEERLSLEEALR 450 (479)
T ss_pred cCch----------HHHHHHCCCeeeccCCCCCCCCC-------HHHHHHHHheeeCCCCCC---CCCccccCCHHHHHH
Confidence 2233 44789999999999999643211 111000000000000000 001345789999999
Q ss_pred HHhHhHHHHcCCCCCcccccCCCCccEEE
Q psy10113 392 VTSTNAAKIFNLYPKKGVIAEGSDADIVV 420 (596)
Q Consensus 392 ~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi 420 (596)
++|.|||+++|+++++|+|++||.|||||
T Consensus 451 ~~T~~~A~~lg~e~~~GsLe~Gk~ADlvv 479 (479)
T cd01300 451 AYTIGAAYAIGEEDEKGSLEPGKLADFVV 479 (479)
T ss_pred HHHHHHHHHhccccccccccCCcccceeC
Confidence 99999999999998999999999999986
No 103
>KOG3968|consensus
Probab=99.90 E-value=3.7e-23 Score=209.99 Aligned_cols=361 Identities=17% Similarity=0.174 Sum_probs=200.3
Q ss_pred eeeEEEEC-CeEEEeccCCCCC----------CCCeEEEcCCCEEeeCccccccCCC-----------c-----------
Q psy10113 36 DLDIYIEN-GVIQQLGRNLIVP----------GGVRVIDAAGSYVIPGGIDPHTHFE-----------L----------- 82 (596)
Q Consensus 36 ~~dV~Ied-G~I~~Ig~~~~~~----------~~~~vIDa~G~~V~PG~ID~HtHl~-----------~----------- 82 (596)
...+.|.| |+|+.|++..... +..++++.+|.++||||||+|+|.. +
T Consensus 27 ~~sl~Vd~~GKi~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~mPGfVdtH~H~a~q~~~s~~g~d~pll~wl~~~~f 106 (439)
T KOG3968|consen 27 GSSLGVDDTGKIVFIGKAYFDENKLKGEGVEKENTKIKLSSGHFLMPGFVDTHIHPAHQFAMSGAGTDMPLLQWLGKYTF 106 (439)
T ss_pred CcceeecCCccEEEeeccccchhhhcccccccccceeeecCCcEEecceeecccchHhhhhhhccccCcHHHHHhhccee
Confidence 45668887 9999999743321 2357899999999999999999931 1
Q ss_pred cccCCCCc-chHH----HHHHHHHhCCceEEeccccCCCC--ccHHHHHHHHHHHhcc-CceeeeeccccccCC---Chh
Q psy10113 83 ELMGATSV-DDFY----HGTKAAVAGGTTTIIDFALPRKG--ESLIKTYESWRQKADE-KVCCDYALHVGITWW---SDQ 151 (596)
Q Consensus 83 ~~~~~~~~-d~~~----~g~~~al~~GtTti~D~~~~~~~--~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~ 151 (596)
+.....+. ++.+ .-.+..|+.||||+.-+..-... ..+.++......++.. +.+.+-.-| ..+.. .++
T Consensus 107 ~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~~~~~~s~~ll~~~~~~~G~R~~igkv~m~~~~~-~~p~~~~~~E~ 185 (439)
T KOG3968|consen 107 PLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFSTLHLDSELLLARAAIRAGQRALIGKVCMDCNAH-AVPKGVETTEE 185 (439)
T ss_pred ecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhhccCchhHHHHHHHHHHhCCceeeeeehhccCCC-CCCccchhHHH
Confidence 11122233 3333 34567799999999755421111 1122223332222222 222222211 12222 222
Q ss_pred HHHHHHHHHHH---cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEec-CchhhhHHHHHHHHHcCCCCCCcc
Q psy10113 152 VQQEMAELCEK---HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHA-ENGEIIDKNTQKLLAAGIKGPEGH 227 (596)
Q Consensus 152 ~~~e~~~lv~~---~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHa-e~~~~i~~~~~~l~~~Gi~~~~~~ 227 (596)
..+..++++.. .+-+.......+.-...|+.+.+.+..+.++...++++.|. |++..|...+...
T Consensus 186 si~~t~~~i~~~~~~~~~~~~~~vt~~fa~~c~k~v~~~l~~lak~~~l~~q~hIsen~~EI~~~~~ff----------- 254 (439)
T KOG3968|consen 186 SIESTEDLIPKLEKLKREKVNPIVTPRFAASCSKGVFEELSKLAKYHNLHIQIHISENGKEIEAVKNFF----------- 254 (439)
T ss_pred HHHHHHHHHHHHHhhccCCCCCcccccccCCCcchhHHHHHHHHHhhhhhhhhhhhhcHHHHHHHHHhh-----------
Confidence 33333333321 11111111112222345788888888899999999999996 5655554433222
Q ss_pred cCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccc
Q psy10113 228 QLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQ 307 (596)
Q Consensus 228 ~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~ 307 (596)
|+....-.+..-..+....-.-.|.+|++..+ .+++.+ + |.. ..+|++....|.
T Consensus 255 ----~~~~~y~~~yd~~~lL~~ktvlaH~~hl~d~e-i~~l~k---~----g~s-vshCP~Sn~~L~------------- 308 (439)
T KOG3968|consen 255 ----PEKLSYTDVYDKGGLLTEKTVLAHLEHLSDEE-IELLAK---R----GCS-VSHCPTSNSILG------------- 308 (439)
T ss_pred ----hhcccchHHHHHhcccchHhHhhhheecCchh-HHHHHh---c----CCc-eEECCcchhhhc-------------
Confidence 11000000000011111112334556665533 333333 3 540 233444333321
Q ss_pred cccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHH
Q psy10113 308 AAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPE 387 (596)
Q Consensus 308 ~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~ 387 (596)
...-++.++|+.|+.+.+|||-|+++.....+ .++.|...+......-+++++
T Consensus 309 -------------sG~~~vr~lL~~~v~VgLGtDv~~~s~l~a~r--------------~A~~~s~hL~~~~~~~~Ls~~ 361 (439)
T KOG3968|consen 309 -------------SGIPRVRELLDIGVIVGLGTDVSGCSILNALR--------------QAMPMSMHLACVLDVMKLSME 361 (439)
T ss_pred -------------cCCccHHHHHhcCceEeecCCccccccHHHHH--------------HHHHHHHHHHhccCcccCCHH
Confidence 12223448999999999999998754432221 133344444333345789999
Q ss_pred HHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeee---eEEEEEECCEEEEE
Q psy10113 388 KFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG---VPEYVIVGGRVCVD 464 (596)
Q Consensus 388 e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g---~~~~Vi~~GrvV~~ 464 (596)
|++.+||.|+|++||+.+..|++++||.+|++++|.+.+...-. .... .....+-+.+.| ++..||++||.|++
T Consensus 362 e~L~lATi~GA~aLg~d~~~Gs~eVGK~fDai~id~s~~~~~l~-~~~~--~~~lI~~~v~~g~drni~~V~V~Gk~v~~ 438 (439)
T KOG3968|consen 362 EALYLATIGGAKALGRDDTHGSLEVGKYFDAIIIDLSAPESPLY-RFSG--HHDLISKVVYNGDDRNIAEVFVAGKLVKQ 438 (439)
T ss_pred HHHHHHhccchhhccCCCcccceecccccceEEEeCCCCcchhh-hccc--hHHHHHHHHhcCCCCceEEEEEccEEecc
Confidence 99999999999999999999999999999999999986622111 0000 012233345566 78999999999875
No 104
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.90 E-value=7.2e-22 Score=199.30 Aligned_cols=99 Identities=25% Similarity=0.278 Sum_probs=77.5
Q ss_pred CCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeee---eEEEEEEC
Q psy10113 382 GILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG---VPEYVIVG 458 (596)
Q Consensus 382 ~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g---~~~~Vi~~ 458 (596)
..++++++|+-.|...|+.||| .+.|-|++|..|||+|+|+...+.....+-. .-|+-|+...- .+..|++.
T Consensus 472 p~l~Le~av~rmT~~~Ae~~GL-~drGlvreG~rADl~viDp~~vr~~a~y~~~----~lPa~G~~~~~vn~~~vat~v~ 546 (579)
T COG3653 472 PLLSLERAVRRMTGELAEWFGL-GDRGLVREGDRADLVVIDPHLVRDVATYTEP----ALPAYGILRVMVNRNVVATGVG 546 (579)
T ss_pred CcccHHHHHHHHhccHHHHhCc-ccccccccccccceEEEccccccccccccCc----cCCCCcceEEEEeccceeeecc
Confidence 5699999999999999999999 6789999999999999999766554432222 23555643322 24577788
Q ss_pred CEEEEECCceeecCCCCeeecCCCCCC
Q psy10113 459 GRVCVDEGNLRVAQGQGNYLPTHTNPP 485 (596)
Q Consensus 459 GrvV~~dG~~~~~~g~g~~~~~~~~~~ 485 (596)
|.+.++||+++...-.|||++..+..+
T Consensus 547 Gvvs~rdGe~tg~~~aGR~lR~g~~g~ 573 (579)
T COG3653 547 GVVSFRDGEFTGQVKAGRYLRAGELGA 573 (579)
T ss_pred eeEEEecCcccCcccccchhccccccc
Confidence 999999999998656999999876644
No 105
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.89 E-value=6.3e-21 Score=205.78 Aligned_cols=283 Identities=23% Similarity=0.264 Sum_probs=171.9
Q ss_pred EcCCCEEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeecc
Q psy10113 63 DAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALH 142 (596)
Q Consensus 63 Da~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 142 (596)
||+|++|+|||||+|+|+..+. .+.+. .+++++++||||+++......+....+.++...+.+. +...++.+.
T Consensus 1 Da~G~~v~PG~ID~H~Hi~~~~---~~~~~---~~~~a~~~GvTtvv~~p~~~~~v~g~~~~~~~~~~a~-~~p~~~~~~ 73 (422)
T cd01295 1 DAEGKYIVPGFIDAHLHIESSM---LTPSE---FAKAVLPHGTTTVIADPHEIANVAGVDGIEFMLEDAK-KTPLDIFWM 73 (422)
T ss_pred CCCCCEEccCEEEccCCcCCCC---CChHH---HHHHHHCCCcEEEEeCCCCCCcCCCHHHHHHHHHHHh-CCCceEEEe
Confidence 7999999999999999997763 23333 4889999999999986433222233444444444332 233344332
Q ss_pred ccc--cCCC----hh--HHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHH
Q psy10113 143 VGI--TWWS----DQ--VQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQ 214 (596)
Q Consensus 143 ~~~--~~~~----~~--~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~ 214 (596)
+.. +... .. ..++++++.+..++.+++.+|+|.+. ...++++.+.++.++++|.++.+|+.... .+...
T Consensus 74 ~p~~vp~t~~e~~g~~~~~~~i~~l~~~~~vvglgE~md~~~v-~~~~~~l~~~i~~A~~~g~~v~~Ha~g~~--~~~L~ 150 (422)
T cd01295 74 LPSCVPATPFETSGAELTAEDIKELLEHPEVVGLGEVMDFPGV-IEGDDEMLAKIQAAKKAGKPVDGHAPGLS--GEELN 150 (422)
T ss_pred CCCcCCCCCCCCCCCcCCHHHHHHHhcCCCCcEEEEeccCccc-cCCcHHHHHHHHHHHhCCCEEEEeCCCCC--HHHHH
Confidence 221 1111 01 36788888776699999999988653 34778999999999999999999997643 12222
Q ss_pred HHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceee
Q psy10113 215 KLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVG 294 (596)
Q Consensus 215 ~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~ 294 (596)
.+++.|+.. .|... ...+.+++. +. |+ .+...
T Consensus 151 a~l~aGi~~---------------------------------dH~~~-~~eea~e~l-~~----G~--~i~i~------- 182 (422)
T cd01295 151 AYMAAGIST---------------------------------DHEAM-TGEEALEKL-RL----GM--YVMLR------- 182 (422)
T ss_pred HHHHcCCCC---------------------------------CcCCC-cHHHHHHHH-HC----CC--EEEEE-------
Confidence 333333322 12211 111222222 23 55 21100
Q ss_pred cCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHh--cCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHH
Q psy10113 295 THANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLN--ENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLS 372 (596)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~--~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~ 372 (596)
....+ .+.+.+...+. .+..++++||....+... ..| .+.
T Consensus 183 --~g~~~-------------------~~~~~~~~~l~~~~~~~i~l~TD~~~~~~~~-----------~~g------~~~ 224 (422)
T cd01295 183 --EGSIA-------------------KNLEALLPAITEKNFRRFMFCTDDVHPDDLL-----------SEG------HLD 224 (422)
T ss_pred --CcccH-------------------hhHHHHHHhhhhccCCeEEEEcCCCCchhhh-----------hcc------hHH
Confidence 00000 01112222332 478899999984221110 011 111
Q ss_pred HHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeE
Q psy10113 373 VIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVP 452 (596)
Q Consensus 373 ~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~ 452 (596)
.+.+... ..+++++++++++|.|||++||+ +++|+|++|+.|||++||.... -++
T Consensus 225 ~v~r~a~-~~g~s~~eal~~aT~n~A~~~gl-~~~G~i~~G~~AD~vv~~~~~~-----------------------~~v 279 (422)
T cd01295 225 YIVRRAI-EAGIPPEDAIQMATINPAECYGL-HDLGAIAPGRIADIVILDDLEN-----------------------FNI 279 (422)
T ss_pred HHHHHHH-HcCCCHHHHHHHHhHHHHHHcCC-CCCcccCCCCcCCEEEECCCCC-----------------------Cce
Confidence 2222222 34689999999999999999999 7899999999999999984210 146
Q ss_pred EEEEECCEEEEECC
Q psy10113 453 EYVIVGGRVCVDEG 466 (596)
Q Consensus 453 ~~Vi~~GrvV~~dG 466 (596)
..||++|++||+.-
T Consensus 280 ~~v~~~G~~v~~r~ 293 (422)
T cd01295 280 TTVLAKGIAVVERH 293 (422)
T ss_pred EEEEECCeEEEEec
Confidence 79999999999753
No 106
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=99.86 E-value=1.2e-20 Score=188.96 Aligned_cols=349 Identities=21% Similarity=0.244 Sum_probs=223.2
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccCCC--C--------CCCCeEEEcCCCEEeeCccccccCCCccccCC
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLI--V--------PGGVRVIDAAGSYVIPGGIDPHTHFELELMGA 87 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~~~--~--------~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~ 87 (596)
-.|++|.|+.|+|....+++||.|+||||..||+... . ..+.++|.+.|++|.-|+||+|.|+-.|
T Consensus 66 ~~D~VITNa~IiD~~Gi~KADiGikdGrI~~IGKaGNPd~~dgV~iiiG~sTe~iagEg~I~TAGGiDtHiHfI~P---- 141 (568)
T COG0804 66 ALDLVITNALIIDYWGIVKADIGIKDGRIAGIGKAGNPDIMDGVTIIIGPSTEIIAGEGKIVTAGGIDTHIHFICP---- 141 (568)
T ss_pred cccEEEeeeEEEeccceEEeecccccceEEEeecCCCCCccCCceEEeccccceecCCceEEeeccccceeEEecH----
Confidence 3689999999999999999999999999999997322 1 1367789999999999999999998443
Q ss_pred CCcchHHHHHHHHHhCCceEEeccccC-CCCc------cHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHH
Q psy10113 88 TSVDDFYHGTKAAVAGGTTTIIDFALP-RKGE------SLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELC 160 (596)
Q Consensus 88 ~~~d~~~~g~~~al~~GtTti~D~~~~-~~~~------~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv 160 (596)
+....||++|+||++.-... ..+. +-...+.+..+.++ ....++++..-.....+. .+.+.+
T Consensus 142 -------qqi~~Al~sGiTtmiGGGtGpa~Gt~aTT~TpG~w~i~rMl~a~d-~~p~N~g~lgKGn~s~~~---~L~Eqi 210 (568)
T COG0804 142 -------QQIEEALASGITTMIGGGTGPADGTNATTCTPGPWHIARMLQAAD-GLPMNIGFLGKGNASNPA---PLAEQI 210 (568)
T ss_pred -------HHHHHHHhcCcEEEecCccCCCCCcccccccCCHHHHHHHHHhhh-cCceeeEEeecCCCCCch---hHHHHH
Confidence 22567899999999753321 1110 11112233333333 466777776655444433 334444
Q ss_pred HHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHH
Q psy10113 161 EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAV 240 (596)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~ 240 (596)
. .|+.++|+.-+ +-.++..+..++..|.++++.+.+|...-. +.|+. |..
T Consensus 211 ~-aGa~GlKlHED----WG~TpaaI~~~L~VAD~~DvqVaiHtDTLN----------EsGfv---------------EdT 260 (568)
T COG0804 211 E-AGAIGLKLHED----WGATPAAIDTCLSVADEYDVQVAIHTDTLN----------ESGFV---------------EDT 260 (568)
T ss_pred h-hccceeEeecc----cCCCHHHHHHHHhhhhhhceEEEEeecccc----------cccch---------------HhH
Confidence 3 49999997654 446899999999999999999999975421 11111 221
Q ss_pred HHHHHHhcccCCCeEEEecC---cHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCC
Q psy10113 241 TRACTIANQVDCPLYVVHIM---SKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLR 317 (596)
Q Consensus 241 ~~~i~la~~~~~p~~i~hv~---s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr 317 (596)
++...+.-+|..|.. ...+.++|+-+... .+.|.-+..+.+....+-..|+.-- -.++-.+|.+-
T Consensus 261 -----i~A~~gRtIHtyHtEGAGGGHAPDiikv~~~~----NvLPsSTNPT~PytvNT~~EhlDMl---MVcHhL~p~ip 328 (568)
T COG0804 261 -----IAAIKGRTIHTYHTEGAGGGHAPDIIKVAGQP----NVLPSSTNPTRPYTVNTIDEHLDML---MVCHHLDPRIP 328 (568)
T ss_pred -----HHHhcCceeEEeeccCCCCCCccHHHHHccCC----CcCcCCCCCCCCcccccHHHhhhhh---hhhccCCCCCc
Confidence 223346677777765 34677888777554 5555444444444433333222210 01112222211
Q ss_pred C---------CCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhc---------
Q psy10113 318 P---------DETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGV--------- 379 (596)
Q Consensus 318 ~---------~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v--------- 379 (596)
. .+++..+---+...|....++||..... .+.+.....|+.+-
T Consensus 329 eDvaFAeSRIR~eTIAAEdiLhDmGafSmisSDSQAMG-------------------RvGEvi~RtwQtA~kmK~qrG~L 389 (568)
T COG0804 329 EDVAFAESRIRPETIAAEDILHDMGAFSMISSDSQAMG-------------------RVGEVITRTWQTADKMKKQRGAL 389 (568)
T ss_pred chhhhhhhccchhhhhHHHHHhhccceEEeccchHhhh-------------------ccchhhhhHHHHHHHHHHhcCCC
Confidence 1 1233333223445688899999974321 11222222333110
Q ss_pred -----cCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEE
Q psy10113 380 -----VPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEY 454 (596)
Q Consensus 380 -----~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~ 454 (596)
....+...+.++..|.|||-.-|+.+.+|+|++||.||||+|+|. |-|. +|..
T Consensus 390 ~~d~~~nDN~RvkRYiaKyTINPAIthGis~~vGSvEvGK~ADlVLW~Pa------------------FFGv----KP~~ 447 (568)
T COG0804 390 PEDAGGNDNFRVKRYIAKYTINPAITHGISHEVGSVEVGKLADLVLWDPA------------------FFGV----KPEL 447 (568)
T ss_pred CCCCCCCccHHHhhhhhheecCHHHhcccchhccceeccceeeeeeechh------------------hcCC----Ccce
Confidence 123345678999999999999999999999999999999999976 3232 7899
Q ss_pred EEECCEEEEE
Q psy10113 455 VIVGGRVCVD 464 (596)
Q Consensus 455 Vi~~GrvV~~ 464 (596)
|+.+|-|.+.
T Consensus 448 vlkgG~ia~a 457 (568)
T COG0804 448 VLKGGMIAWA 457 (568)
T ss_pred EEecceeeee
Confidence 9999999985
No 107
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.85 E-value=3.8e-20 Score=188.90 Aligned_cols=299 Identities=25% Similarity=0.255 Sum_probs=166.9
Q ss_pred EcCCCEEeeCccccccC--CCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeee
Q psy10113 63 DAAGSYVIPGGIDPHTH--FELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYA 140 (596)
Q Consensus 63 Da~G~~V~PG~ID~HtH--l~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 140 (596)
|++|++|+|||||+|+| +..........+........++.+|+|++++.... ........... . ..
T Consensus 1 D~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~tt~~~~~~~----~~~~~~~~~~~------~--~~ 68 (304)
T PF13147_consen 1 DASGKYVLPGLIDLHVHGPLGRSEDGAPWAEQAAAASAAALAGGVTTVVDMPGT----NPEELNRARRR------G--AG 68 (304)
T ss_dssp E-TTSEEEE-EEEEEEECCSSCETTTEEHSSHHHHHHHHHHHTTEEEEEESSSS----SHHHHHHHHHH------E--SE
T ss_pred CCCCCEEccceeeeeeCCCcCCCCCCccchhhHHHHHHHHHhCCEeEEecCCCC----CchhhHHHHhh------c--cc
Confidence 89999999999999999 44444444444555677888999999999984222 12222222211 1 11
Q ss_pred ccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcC
Q psy10113 141 LHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAG 220 (596)
Q Consensus 141 ~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~G 220 (596)
...............+..+.........+..+.+. ......+.+..+.+...+....++..+...+..... .+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 141 (304)
T PF13147_consen 69 YPGSGAGPRGTTIEELEALVDLIAAEGVGFVAAYN---GIEGPGLQAAIRAAHRAGVIKVVGHSPADGIEGAIA----EG 141 (304)
T ss_dssp EEEECESCCHHHHHHHHHHHHHHHHTEEEEESSST---HHHHHHHHHHHHHHHHHTHEEEEEECHHHHHHHHHH----HH
T ss_pred cccccccccccchHHHHHHHHHHhhcCcceeeccc---cCCHHHHHHHHHHHHhcCCeeeecccchhhHHHHHH----hc
Confidence 11122223344455555555443344444443321 345667888888899999555555444332222211 11
Q ss_pred CCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCC
Q psy10113 221 IKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQI 300 (596)
Q Consensus 221 i~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~ 300 (596)
....... ......+............+..+.+...........+...+.. ++ ...... . .
T Consensus 142 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~---~-------~ 201 (304)
T PF13147_consen 142 LDAMEHI----LPHEVAEALHLAEALAQGAGPGLHCHVASDDATAEGVAIAHGF----GL--PPTPLH---L-------L 201 (304)
T ss_dssp HHTTHHS----THHHHHHHHHHHHHHHHHHTHCEEEEETSSHHHHHHHHHHHHT----TH--EEEEEE---H-------H
T ss_pred ccchhhh----hhhhHHHHHHHHHHhhhccccchhhhhhhhhhhhHHHHHHHhh----cc--ccchHH---h-------h
Confidence 1111111 1111223333444445555666666555554443333333333 44 322222 0 0
Q ss_pred CCc-cccccccccCCCCC--CCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHh
Q psy10113 301 PCT-WHDQAAHVLSPPLR--PDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEK 377 (596)
Q Consensus 301 ~~~-~~~~~~~~~~Pplr--~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~ 377 (596)
... ......+...||++ . ......+..++++|+.++++||+.+.... +....+..+..
T Consensus 202 ~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~l~~~Gv~~~l~sD~~~~~~~-----------------~~~~~~~~~~~- 262 (304)
T PF13147_consen 202 ARDAAAAGIRFKVLPPLRLDL-REDRAALRELLEAGVPVALGSDHAPSSTE-----------------GSGDLLHEAMR- 262 (304)
T ss_dssp HHHHHHHGGGGEESSCHHHHT-HHHHHHHHHHHHTTSSEEEEE-BBTTTTT-----------------CTTTHHHHHHH-
T ss_pred HHHHHhcCceeeeCCCccccc-hhhhHHHHHHHhCCCeEEEEcCCcccccc-----------------cccccchhhhh-
Confidence 000 00134556777765 3 45678889999999999999999775432 00111222222
Q ss_pred hccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEE
Q psy10113 378 GVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIV 419 (596)
Q Consensus 378 ~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlV 419 (596)
.+...+|+++++++++|+|||++||+++++|+|++|++||||
T Consensus 263 ~~~~~gl~~~~al~~~T~~pA~~lgl~~~~G~i~~G~~ADlv 304 (304)
T PF13147_consen 263 LAVRAGLSPEEALRAATSNPARILGLDDDKGSIAPGKDADLV 304 (304)
T ss_dssp HHHHTSSTHHHHHHHHTHHHHHHTTBTTTSSSTSTTSB-EEE
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHhCCCCCCccCCCCCCCCcC
Confidence 223378999999999999999999999999999999999997
No 108
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=99.80 E-value=5.7e-18 Score=170.10 Aligned_cols=85 Identities=24% Similarity=0.481 Sum_probs=63.8
Q ss_pred CCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCe-EeeeeEEEEEECCE
Q psy10113 382 GILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGL-VCHGVPEYVIVGGR 460 (596)
Q Consensus 382 ~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~-~~~g~~~~Vi~~Gr 460 (596)
..+++.|+..++-.||||.||+.++||.|.+|++|||.|+|.++...-+... |+-+ ..-....+|+.+|+
T Consensus 436 rE~t~~eia~~TRa~~ak~lgl~e~kGhLg~GadadIaiYdlnP~~vDps~d---------ye~v~kaf~~A~ytlK~Ge 506 (575)
T COG1229 436 RELTLYELAIMTRANPAKVLGLSERKGHLGVGADADIAIYDLNPEQVDPSND---------YEKVEKAFRKAAYTLKGGE 506 (575)
T ss_pred ccccHHHHHHHHhcChhhhcccccccCccCcCccCceEEEecChhhcCCccc---------HHHHHHHHhheeEEecCce
Confidence 4578899999999999999999888999999999999999988442222111 1110 01113579999999
Q ss_pred EEEECCceeecCCCCe
Q psy10113 461 VCVDEGNLRVAQGQGN 476 (596)
Q Consensus 461 vV~~dG~~~~~~g~g~ 476 (596)
||++||++.... .||
T Consensus 507 IvvkdGeiv~~p-~gr 521 (575)
T COG1229 507 IVVKDGEIVAEP-EGR 521 (575)
T ss_pred EEEecceEEecc-cCc
Confidence 999999997664 444
No 109
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.77 E-value=9.8e-19 Score=182.67 Aligned_cols=294 Identities=21% Similarity=0.250 Sum_probs=143.8
Q ss_pred EEeeCccccccCCCccccC-----CCCcchHHHHHHHHHhCCceEEeccccCCCCcc--HHHH-HHHHHHHhc---cCce
Q psy10113 68 YVIPGGIDPHTHFELELMG-----ATSVDDFYHGTKAAVAGGTTTIIDFALPRKGES--LIKT-YESWRQKAD---EKVC 136 (596)
Q Consensus 68 ~V~PG~ID~HtHl~~~~~~-----~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~--~~~a-~~~~~~~~~---~~~~ 136 (596)
+|+|||||+|+|+..+... ....+.+..+++.++++||||++|+....+... .... .+....... ....
T Consensus 1 ~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (333)
T PF01979_consen 1 YVMPGLIDAHVHGGQGGLRGLLDPEDHYESIRTGAKAALKGGVTTVLDTPHTSPNPDIELRNEIMEGLAAAPKIEPAMTL 80 (333)
T ss_dssp EEEE-EEEEEEEGGGTTHTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEEESSHCHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred CEEcChhHHhhCcCCcCccccCCHHHHHHHHHHHHHHHHhcCeEEEEcCcccCCccccccccccccccccchhhhccccc
Confidence 6999999999999776443 113455677889999999999999965444323 1111 111111111 0011
Q ss_pred ---eeeeccccccCCChhH---------HHHHHHHHHHcCCC-----EEEEEeecCCCccCCHHHHHHHHHHHHh-----
Q psy10113 137 ---CDYALHVGITWWSDQV---------QQEMAELCEKHGVN-----SFKTFMAYKGLYMLSDGELYDAFSAIKN----- 194 (596)
Q Consensus 137 ---~~~~~~~~~~~~~~~~---------~~e~~~lv~~~Gv~-----~~k~~~~~~~~~~~~~~~l~~~~~~a~~----- 194 (596)
...+.+.......... .+++.+.+.+.+.. .+......+....++.+.+...++.+++
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 160 (333)
T PF01979_consen 81 LGTGSVGGHGEGPNEPPDKNGPHDEAFEGEDFIKFIEEAGSEIKRIDGVIPAISPHNPYTVSDEELREAVELAKEFLAAE 160 (333)
T ss_dssp EEECECSEEEECHHHHHHHHSEHHHHHHHHHHHHHHHHHTTTCEEEECEEEEEEHHTTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccCCchhhhHHHHHHHhhhhhhhhcccccccccccccccccchhhhhhhHHhhhhhHHHHH
Confidence 1122222211111111 12233343333222 3334445566777899999999999988
Q ss_pred c-CCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHH-hcccCCCeEEEecCcHHHHHHHHHHH
Q psy10113 195 L-GAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTI-ANQVDCPLYVVHIMSKAAGDAMAYKR 272 (596)
Q Consensus 195 ~-g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~l-a~~~~~p~~i~hv~s~~~~~~i~~a~ 272 (596)
. +.++.+|+.+..........+. ....+ +......-+ ....+....+.|...-. .+.+..++
T Consensus 161 ~~~~~~~~h~~~~~~~~~~~~~~~-------------~~~~~--~~~~~~~~~~~~~~~~~~~~~h~~~~~-~~~~~~l~ 224 (333)
T PF01979_consen 161 KLGIPVHIHVAEGTGEVEAMTHLY-------------GMSPI--EALDHLGLLEEAIDDGVDLIAHGTHLS-DEEIELLK 224 (333)
T ss_dssp HHTHEEEEEESSSHHHHCCCHHHH-------------SHHHH--HHHHHHHSCHHHHHHHCEEEEEHTTSE-HHHHHHHH
T ss_pred hhcccceeeeccCcccceeEeeee-------------eccch--hhhccchhhhhhcccccceeeccccCC-HHHhhhhh
Confidence 3 9999999876543311111110 01111 111000000 00001122233443211 11223333
Q ss_pred HHHhhcCCceeeE-Eeeccceee-cCCCCCCCccccccccccCC-CCCCCCCcHHHHHHHHhc-CCccEEeCCCCCCChh
Q psy10113 273 KELMKKGKHCTLY-GETLAAAVG-THANQIPCTWHDQAAHVLSP-PLRPDETTPTHLLTLLNE-NALQTTGSDNCTFNKN 348 (596)
Q Consensus 273 ~~~~~~G~~~~v~-~e~~~~~l~-~~~~~~~~~~~~~~~~~~~P-plr~~~~~~~~l~~~l~~-G~~~~~gsD~~~~~~~ 348 (596)
.. +. .+. +........ ..+..... ...+ ....-.+....+...+.. |+. +|||+..
T Consensus 225 ~~----~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~g~~--lgtDg~~---- 284 (333)
T PF01979_consen 225 ET----GI--GIIHCPISNDSAPHKPGKAIMM--------DGTAEGIYGLGSGGAPLFRMLDKMGVN--LGTDGVA---- 284 (333)
T ss_dssp HH----TH--EEEEEHHHHHHHHHHTTHHSET--------TBSBTSBSCTTHHHHHHHHHHHCTTHE--ETTCTTC----
T ss_pred cc----CC--ccccccchhhhhcccccccccc--------chhccccccccccccchhhhhhhcccc--ccccccc----
Confidence 33 33 222 221111100 00000000 0000 000001223345556666 777 9999433
Q ss_pred hhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCccEEEEc
Q psy10113 349 QKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWN 422 (596)
Q Consensus 349 ~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVi~d 422 (596)
. ++++ .++.+ +++.++|+++|.||||+||+++++|+|++|++|||||||
T Consensus 285 -~-----------------~l~~--~~~~~-----~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~ADlvv~D 333 (333)
T PF01979_consen 285 -E-----------------ELKL--FVRLG-----ISPEEALKMATINPAKILGLDDDKGSIEPGKDADLVVLD 333 (333)
T ss_dssp -H-----------------HHHH--HHHHH-----SHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB--EEEEE
T ss_pred -c-----------------cccc--ccccc-----ccccccccccchhHHHHcCCCCCEEEeCcCCCcCEEEeC
Confidence 1 2222 22222 899999999999999999999999999999999999997
No 110
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.77 E-value=3.7e-17 Score=168.49 Aligned_cols=260 Identities=20% Similarity=0.168 Sum_probs=156.7
Q ss_pred eeCccccccCC-Cc---cccCCCCcc--hHHHHHHHHHhCCceEEeccccCC---CC---cc----HHHHHHHHHHHhcc
Q psy10113 70 IPGGIDPHTHF-EL---ELMGATSVD--DFYHGTKAAVAGGTTTIIDFALPR---KG---ES----LIKTYESWRQKADE 133 (596)
Q Consensus 70 ~PG~ID~HtHl-~~---~~~~~~~~d--~~~~g~~~al~~GtTti~D~~~~~---~~---~~----~~~a~~~~~~~~~~ 133 (596)
+||+||+|+-. .. |-.+...+- .+...-+++++.||||+.|..... .+ .. +.+++...+ ...
T Consensus 1 lPG~vdlH~D~~E~~~~PRp~v~~~~~~a~~~~d~~~~a~GiTT~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 78 (325)
T cd01306 1 LPGLIDLHTDNLEKHVMPRPGVDWPMDIALAAHDRQLAAAGITTVFDALSFGDEEGGRRRLRNLRKLIDAIRELH--ARG 78 (325)
T ss_pred CCCeEEecCcchhcccCCCCCCCCCHHHHHHHHHHHHHhcCcccceeeeEeccccCCcccHHHHHHHHHHHHHhh--hCC
Confidence 69999999942 22 211222211 122334566889999999875432 11 11 122222222 124
Q ss_pred CceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEee----------------c-CCC-------------------
Q psy10113 134 KVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMA----------------Y-KGL------------------- 177 (596)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~----------------~-~~~------------------- 177 (596)
...++--+|........+..+.++.+++...+..+. ||+ | ...
T Consensus 79 ~~~~d~~~hlR~E~~~~~~~~~~~~~~~~~~v~lvs-~~dH~pg~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (325)
T cd01306 79 VLRADHRLHLRCELADPAVLPELESLMADPRVHLVS-LMDHTPGQRQFRDLEKYREYYAKKYGLSDEEVEEAILERKARA 157 (325)
T ss_pred cchhhcceEEEEeecCccHHHHHHHHhcCCCcCEEE-EeCCCCccccccCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHh
Confidence 567788888887777788888999988776666554 332 0 011
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEE
Q psy10113 178 YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVV 257 (596)
Q Consensus 178 ~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~ 257 (596)
...+++++.++++.|+++|+++.+|..... +..+...+.|+...|
T Consensus 158 ~~~~~~~~~~iv~~A~~~gl~vasH~d~~~---~~v~~a~~~Gv~~~E-------------------------------- 202 (325)
T cd01306 158 AAYAPANRSELAALARARGIPLASHDDDTP---EHVAEAHELGVVISE-------------------------------- 202 (325)
T ss_pred hhcCHHHHHHHHHHHHHCCCcEEEecCCCh---HHHHHHHHCCCeecc--------------------------------
Confidence 123456777888888888888888875431 234444444544432
Q ss_pred ecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccE
Q psy10113 258 HIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQT 337 (596)
Q Consensus 258 hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~ 337 (596)
|..+.+ .+..+++. |+ .|.... ..+...+.+ .....++++++.|+.++
T Consensus 203 ~p~t~e---~a~~a~~~----G~--~vv~ga--pn~lrg~s~---------------------~g~~~~~~ll~~Gv~~a 250 (325)
T cd01306 203 FPTTLE---AAKAAREL----GL--QTLMGA--PNVVRGGSH---------------------SGNVSARELAAHGLLDI 250 (325)
T ss_pred CCCCHH---HHHHHHHC----CC--EEEecC--cccccCccc---------------------cccHhHHHHHHCCCeEE
Confidence 222322 33344444 76 333211 000000000 11234568999999999
Q ss_pred EeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCcccccCCCCcc
Q psy10113 338 TGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDAD 417 (596)
Q Consensus 338 ~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~AD 417 (596)
++||+.+..... ..+ .++...++++.++|+++|.|||++||++ ++|+|++|+.||
T Consensus 251 l~SD~~p~sll~-----------------------~~~-~la~~~gl~l~eAl~~aT~nPA~~lGl~-d~G~I~~G~~AD 305 (325)
T cd01306 251 LSSDYVPASLLH-----------------------AAF-RLADLGGWSLPEAVALVSANPARAVGLT-DRGSIAPGKRAD 305 (325)
T ss_pred EEcCCCcHhHHH-----------------------HHH-HHHHHcCCCHHHHHHHHhHHHHHHcCCC-CCCCcCCCCCCC
Confidence 999997543211 111 1234467999999999999999999996 679999999999
Q ss_pred EEEEcCC
Q psy10113 418 IVVWNYK 424 (596)
Q Consensus 418 lVi~d~~ 424 (596)
||+||.+
T Consensus 306 lvvvd~~ 312 (325)
T cd01306 306 LILVDDM 312 (325)
T ss_pred EEEEeCC
Confidence 9999986
No 111
>KOG3892|consensus
Probab=99.74 E-value=2.8e-17 Score=157.15 Aligned_cols=375 Identities=18% Similarity=0.166 Sum_probs=216.2
Q ss_pred EEEEccEEEcCCCceeeeEEEECCeEEEeccC--CCCCCCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHH----
Q psy10113 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRN--LIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFY---- 94 (596)
Q Consensus 21 llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~--~~~~~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~---- 94 (596)
+-+.|++|+-+....+.|++|+||||..=.+- .+..-....|||.|.++.|||||....-+.-..-....+++.
T Consensus 14 lQFtNCrilR~g~l~~edlWVR~GRIldpe~vFFeErt~Ad~riDCgG~IlaPGfIDlQiNGGfGvDFS~dte~~~eGvA 93 (407)
T KOG3892|consen 14 LQFTNCRILRGGKLLREDLWVRGGRILDPEKVFFEERTVADERIDCGGRILAPGFIDLQINGGFGVDFSQDTEDVGEGVA 93 (407)
T ss_pred eeeeeeEEeeCCceeehheeEeCCeecCcccccceeccchhheeccCCeeecCceEEEEecCccccccccchhhhhhhHH
Confidence 55899999988888899999999999765431 111125567999999999999999987643211112233333
Q ss_pred HHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHh-ccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEee
Q psy10113 95 HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKA-DEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMA 173 (596)
Q Consensus 95 ~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~ 173 (596)
.-++..++.|+|++.......+.+.....+-+..... .+...-..++|.+.++.+.+-+..-.+.. +.+|
T Consensus 94 lVAr~ll~hGvtsf~Pt~~tsp~~~YHkilP~ip~~~~~p~GaG~LG~HlEGPFIs~~KrG~HPE~~----i~s~----- 164 (407)
T KOG3892|consen 94 LVARQLLSHGVTSFCPTLVTSPPEVYHKILPQIPVKSGGPHGAGVLGLHLEGPFISREKRGAHPEAH----IRSF----- 164 (407)
T ss_pred HHHHHHHhcCCCcCCCccccCCchhhhhhccccccccCCCCccceeeeeccCCccChhhcCCCHHHH----Hhcc-----
Confidence 4567889999999977665555545544444433322 23456678999999988765332111111 1111
Q ss_pred cCCCccCCHHHHHHHHHHHHhc-CCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCC
Q psy10113 174 YKGLYMLSDGELYDAFSAIKNL-GAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDC 252 (596)
Q Consensus 174 ~~~~~~~~~~~l~~~~~~a~~~-g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~ 252 (596)
+.+-+..+...--.+ ++.+..-|.+..-..+..+.+.+.|++...||....-..-|..-...+-.+.+..+.
T Consensus 165 -------~~~~~~~l~~tYGsleni~IvTlAPEl~~~~evi~~lv~~gitVslGHS~A~L~~gE~AV~sGat~ITHLFNA 237 (407)
T KOG3892|consen 165 -------EADAFQDLLATYGSLENIRIVTLAPELGGAQEVIRALVARGITVSLGHSVADLRAGEDAVWSGATFITHLFNA 237 (407)
T ss_pred -------CccHHHHHHHHhCCccceEEEEecccccCcHHHHHHHHhcceEEeeccchhccCcHHHHHhccchHHHHHHHh
Confidence 111111121111122 233343444333346677888999999999997665444442222222333444454
Q ss_pred CeEEEecCcHHHHHHHHHHHHHHhhcCCceeeE------EeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHH
Q psy10113 253 PLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLY------GETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHL 326 (596)
Q Consensus 253 p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~------~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l 326 (596)
.+.+.|-.. |+.-.+. +.+.-..+..||.|..+.- ...+|...|. -|
T Consensus 238 MlpfHHRDP-----------------GlvGLLtSd~lp~gr~iyyGiIsDG~HThpaA-LRIAyrthpq---------GL 290 (407)
T KOG3892|consen 238 MLPFHHRDP-----------------GLVGLLTSDRLPAGRCIYYGIISDGTHTHPAA-LRIAYRTHPQ---------GL 290 (407)
T ss_pred ccccccCCC-----------------ceeEEeecCCCCCCCeEEEEEecCCccCChhH-hhhhhhcCCC---------ce
Confidence 444433221 2200011 1122233455666655431 1112222221 00
Q ss_pred HHHHhcCCccEEeCCCCCCChhhhhh---CCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCC
Q psy10113 327 LTLLNENALQTTGSDNCTFNKNQKEL---GKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNL 403 (596)
Q Consensus 327 ~~~l~~G~~~~~gsD~~~~~~~~~~~---g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl 403 (596)
.|-.+.+.++|-........+..+ |...|..--+-..|.-..|..+.+.+....+-+.+-++..+|..||+.||+
T Consensus 291 --vLVTDAI~ALGl~~GvH~lGqq~v~Vkgl~A~~aGT~Tl~GSiApMd~CvRhf~kATgCs~e~AleaAtlhPAqlLg~ 368 (407)
T KOG3892|consen 291 --VLVTDAIPALGLGNGVHTLGQQEVEVKGLTAYVAGTKTLSGSIAPMDVCVRHFLKATGCSMESALEAATLHPAQLLGL 368 (407)
T ss_pred --EEEecchhhcccccccccccceeEEEcceEEEeeccccccccccCcHHHHHHHHHhcCCcHHHHHhhhccChHHhhcc
Confidence 111122222222222222111111 111121112223455566788888888888899999999999999999999
Q ss_pred CCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEEC
Q psy10113 404 YPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE 465 (596)
Q Consensus 404 ~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~d 465 (596)
++.||.|..|++||||++|.+- .|..||+.|+.||+.
T Consensus 369 ek~KGTLDfG~dADFVllDd~l-------------------------~V~aT~isG~~V~~a 405 (407)
T KOG3892|consen 369 EKSKGTLDFGADADFVLLDDSL-------------------------HVQATYISGELVWQA 405 (407)
T ss_pred ccccccccccccCceEEEccce-------------------------EEEEEEEccEEEEec
Confidence 9999999999999999999651 467999999999974
No 112
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=99.54 E-value=1.8e-14 Score=114.32 Aligned_cols=67 Identities=42% Similarity=0.573 Sum_probs=49.4
Q ss_pred EEEECCeEEEeccCCCCC-CCCeEEEcCCCEEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEE
Q psy10113 39 IYIENGVIQQLGRNLIVP-GGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTI 108 (596)
Q Consensus 39 V~IedG~I~~Ig~~~~~~-~~~~vIDa~G~~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti 108 (596)
|+|+||||++|++....+ .+.++||++|++|+|||||+|+|+..+.. ...+......+++++|||||
T Consensus 1 V~I~~g~I~~v~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~---~~~~~~~~~~~~l~~GvTTV 68 (68)
T PF13594_consen 1 VLIEDGKIVAVGPDSELPADAAEVIDAKGKYVMPGFIDMHTHLGEPGW---QSLDPETEAAAALAGGVTTV 68 (68)
T ss_dssp EEEETTEEEEEESSCCTTSTCCEEEEETTCEEEE-EEEEEE-TTTTCE---GGCTCHHHHHHHHHTTEEEE
T ss_pred CEEECCEEEEeCCCCCCCCCCCEEEECCCCEEeCCeEeeeeccccccc---cccchhhHHHHHHCcceeeC
Confidence 789999999997654433 46689999999999999999999873222 12223455777889999997
No 113
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=99.42 E-value=2e-12 Score=131.03 Aligned_cols=234 Identities=18% Similarity=0.205 Sum_probs=121.3
Q ss_pred EEeeCccccccCCCcccc------------------------CCCCcchHHHH----HHHHHhCCceEEeccccCCCCcc
Q psy10113 68 YVIPGGIDPHTHFELELM------------------------GATSVDDFYHG----TKAAVAGGTTTIIDFALPRKGES 119 (596)
Q Consensus 68 ~V~PG~ID~HtHl~~~~~------------------------~~~~~d~~~~g----~~~al~~GtTti~D~~~~~~~~~ 119 (596)
+|||||||+|+|+.+..+ ...+.++++.+ +..++++||||+.|+... +..
T Consensus 1 ~v~PG~vn~H~H~~~~~~rg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GtTt~~d~~~~--~~~ 78 (263)
T cd01305 1 ILIPALVNAHTHLGDSAIKEVGDGLPLDDLVAPPDGLKHRLLAQADDRELAEAMRKVLRDMRETGIGAFADFREG--GVE 78 (263)
T ss_pred CccccceeccccHHHHHhhcCCCCCcHHHHhcCcccchHHHHHhCCHHHHHHHHHHHHHHHHhcCCeEEEEccCc--chh
Confidence 489999999999843211 22445555544 345688999999997421 212
Q ss_pred HHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeE
Q psy10113 120 LIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIA 199 (596)
Q Consensus 120 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~ 199 (596)
..+++.+..+....+. +.+ ++.+.+. . .++++.+ +.. .++.++...++ +.++++.|+++|+++
T Consensus 79 ~~~a~~~a~~~~g~r~---~~~-~~~~~~~-~---~~~~~~~--~~~----~~~~~~~~~~~---l~~~~~~A~~~g~~v 141 (263)
T cd01305 79 GIELLRRALGKLPVPF---EVI-LGRPTEP-D---DPEILLE--VAD----GLGLSSANDVD---LEDILELLRRRGKLF 141 (263)
T ss_pred HHHHHHHHHHhcCCCc---eEE-eccCCcc-h---HHHHHHh--hcc----cccCCCCCccC---HHHHHHHHHHCCCee
Confidence 2333333322222221 111 1112221 1 1222221 222 12334444444 999999999999999
Q ss_pred EEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcC
Q psy10113 200 MVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKG 279 (596)
Q Consensus 200 ~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G 279 (596)
++|+.+..... | ...+..++++ +... +.|+..-.. +.++..++. |
T Consensus 142 ~~H~~e~~~~~---------g----------------~~~i~~~~~~----~~~~-i~H~~~l~~-~~~~~la~~----g 186 (263)
T cd01305 142 AIHASETRESV---------G----------------MTDIERALDL----EPDL-LVHGTHLTD-EDLELVREN----G 186 (263)
T ss_pred EEecCCCCCCC---------C----------------chhHHHHHhC----CCCE-EEEcCCCCH-HHHHHHHHc----C
Confidence 99986532100 0 0111122222 2222 456553322 345666666 7
Q ss_pred CceeeEEee-ccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCC
Q psy10113 280 KHCTLYGET-LAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFT 358 (596)
Q Consensus 280 ~~~~v~~e~-~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~ 358 (596)
+ .+...+ ....+ . ...+|+ .++++.|+.+++|||...++.. .++
T Consensus 187 ~--~v~~~P~sn~~l-------------~---~g~~p~----------~~l~~~Gv~v~lGtD~~~~~~~-~~~------ 231 (263)
T cd01305 187 V--PVVLCPRSNLYF-------------G---VGIPPV----------AELLKLGIKVLLGTDNVMVNEP-DMW------ 231 (263)
T ss_pred C--cEEEChhhHHHh-------------C---CCCCCH----------HHHHHCCCcEEEECCCCccCCC-CHH------
Confidence 6 332211 11110 0 012333 3799999999999997554321 111
Q ss_pred cCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHH
Q psy10113 359 HIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKI 400 (596)
Q Consensus 359 ~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~ 400 (596)
-++++.....+.. ..+++.++++++|.|+||+
T Consensus 232 --------~~~~~~~~~~~~~--~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 232 --------AEMEFLAKYSRLQ--GYLSPLEILRMATVNAAEF 263 (263)
T ss_pred --------HHHHHHHHHhccc--ccCCHHHHHHHHhhccccC
Confidence 1444444333322 2679999999999999984
No 114
>PRK06886 hypothetical protein; Validated
Probab=99.38 E-value=1e-10 Score=121.13 Aligned_cols=268 Identities=16% Similarity=0.206 Sum_probs=147.0
Q ss_pred eCccccccCCCcccc-----------C--------------CCCcchHH----HHHHHHHhCCceEEecccc--CCCCcc
Q psy10113 71 PGGIDPHTHFELELM-----------G--------------ATSVDDFY----HGTKAAVAGGTTTIIDFAL--PRKGES 119 (596)
Q Consensus 71 PG~ID~HtHl~~~~~-----------~--------------~~~~d~~~----~g~~~al~~GtTti~D~~~--~~~~~~ 119 (596)
=||||+|+|++..+. + ..+.+|++ ...+.+++.|||.++.|+- +..+..
T Consensus 20 ~gfv~~H~HlDk~~~~~~~~~~~~~~g~l~e~i~~~~~~k~~~t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~~~~l~ 99 (329)
T PRK06886 20 GGWVNAHAHADRAFTMTPEKIAIYHYANLQQKWDLVDEVKRNSTVEDYYARFSQAIELMISQGVTAFGTFVDIDPICEDR 99 (329)
T ss_pred cCCccccccccccccCCCccccccCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHcCcccEeeeeccCCCcccc
Confidence 389999999965331 1 12333443 2445678899999998884 333666
Q ss_pred HHHHHHHHHHHhccCceeee-eccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCC--CccCCHHHHHHHHHHHHhcC
Q psy10113 120 LIKTYESWRQKADEKVCCDY-ALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKG--LYMLSDGELYDAFSAIKNLG 196 (596)
Q Consensus 120 ~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~--~~~~~~~~l~~~~~~a~~~g 196 (596)
..+++.+.++......-..+ .|....- ..+...+-+.+..+. +..+... .+.+ ....+++.+..+++.|+++|
T Consensus 100 ~~~a~~~~r~~~~~~idlq~vafPq~g~-~~~~~~~l~~~al~~--advvGGi-P~~~~~~~~~~~e~l~~~~~lA~~~g 175 (329)
T PRK06886 100 AIIAAHKAREVYKHDIILKFANQTLKGV-IEPTAKKWFDIGSEM--VDMIGGL-PYRDELDYGRGLEAMDILLDTAKSLG 175 (329)
T ss_pred HHHHHHHHHHHhcCcceEEEEecChhhc-cCccHHHHHHHHHHh--CCEEeCc-cCCcCCCCCCCHHHHHHHHHHHHHcC
Confidence 77777777776654333322 2221111 123333344444332 3333222 1111 12456788999999999999
Q ss_pred CeEEEecCch-hhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHH------HHHHHH
Q psy10113 197 AIAMVHAENG-EIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKA------AGDAMA 269 (596)
Q Consensus 197 ~~~~vHae~~-~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~------~~~~i~ 269 (596)
+++.+|+... +......+.+. .+.++ .-...++.+.|+.+-. ..++++
T Consensus 176 ~~Id~Hlde~~~~~~~~le~l~-----------------------~~~~~--~Gl~grV~~sH~~~L~~~~~~~~~~~i~ 230 (329)
T PRK06886 176 KMVHVHVDQFNTPKEKETEQLC-----------------------DKTIE--HGMQGRVVAIHGISIGAHSKEYRYRLYQ 230 (329)
T ss_pred CCeEEeECCCCchhHHHHHHHH-----------------------HHHHH--cCCCCCEEEEEeccccCcChhhHHHHHH
Confidence 9999997543 21111121110 11111 1223478888887532 334566
Q ss_pred HHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhh
Q psy10113 270 YKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQ 349 (596)
Q Consensus 270 ~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~ 349 (596)
..++. |+ .|..-+.. .+.+.+.... -|++ .....+.++++.|+.+++|||+..-.
T Consensus 231 ~La~a----gi--~Vv~~P~s-nl~l~~~~~~------------~p~~---rGv~pv~eL~~aGV~V~lGtDnv~D~--- 285 (329)
T PRK06886 231 KMREA----DM--MVIACPMA-WIDSNRKEDL------------MPFH---NALTPADEMIPEGITVALGTDNICDY--- 285 (329)
T ss_pred HHHHc----CC--eEEECchh-hhhhcccccc------------CcCC---CCCCCHHHHHHCCCeEEEecCCCccc---
Confidence 66666 88 55433322 1111211100 0111 11223448999999999999985311
Q ss_pred hhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCC
Q psy10113 350 KELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLY 404 (596)
Q Consensus 350 ~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~ 404 (596)
| .|.|...+-..+.+... .. ...++.++++++|.|+|++||++
T Consensus 286 -------~--~p~g~~Dmle~~~l~~~-~~--~~~~~~~~l~maT~~gAraLgl~ 328 (329)
T PRK06886 286 -------M--VPLCEGDMWQELSLLAA-GC--RFYDLDEMVNIASINGRKVLGLE 328 (329)
T ss_pred -------C--CCCCCCCHHHHHHHHHH-Hc--CCCCHHHHHHHHhhhHHHHhCCC
Confidence 1 13344344333443332 11 22378999999999999999984
No 115
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=99.38 E-value=5.8e-12 Score=135.53 Aligned_cols=253 Identities=21% Similarity=0.148 Sum_probs=130.3
Q ss_pred HHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccC-ceeeeeccc---ccc---CCChhHHHHHHH---HHHHcCCC
Q psy10113 97 TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEK-VCCDYALHV---GIT---WWSDQVQQEMAE---LCEKHGVN 166 (596)
Q Consensus 97 ~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~---~~~---~~~~~~~~e~~~---lv~~~Gv~ 166 (596)
...+.+.|+||+.|+. .......+.+..+++..... ....+.++. ++. .-.......+.. +....|..
T Consensus 136 ~~~~~a~GiTt~~d~~--~~~~~~~~~~~~~~~l~~~~~l~~rv~~~~~~~~vk~~~dg~~~~~~a~~~~~~~~~~~g~~ 213 (404)
T PF07969_consen 136 AMAAGAYGITTVLDYG--GGFASDPEDLEALRELAAEGGLPLRVHLYPRIGGVKIFADGSPGGRTALLEEPYYADEPGAP 213 (404)
T ss_dssp HHHHCHTCEEEETTCE--CCCGEHHHHHHHHHHHHHCTC--SEEEEEEEEEEEEEESSSSTTHHHHHHHHHHHHHHHTSE
T ss_pred HHHhcCCCeEEecCCc--cccCCCHHHHHHHHHHhhhcCCCeeeeeecccCceeeccccccccchhhhccccccCccccc
Confidence 4456689999999986 22223444444444444332 222222221 111 111112222222 22333431
Q ss_pred EEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHH
Q psy10113 167 SFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTI 246 (596)
Q Consensus 167 ~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~l 246 (596)
..+++....+++++.++++.|.+.|+.+.+|+.....+.... .++..
T Consensus 214 -----~~~~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd~a~~~~l----------------------------~a~~~ 260 (404)
T PF07969_consen 214 -----VHISGLPSFDPEELEELVRAAREAGLQVAVHAIGDRAIDEAL----------------------------DAIEA 260 (404)
T ss_dssp -----EEETC--SSSHHHHHHHHHHHHHCT-EEEEEEESHHHHHHHH----------------------------HHHHH
T ss_pred -----ccccccccccchhHHHHHHHHHhcCCeeEEEEcCCchHHhHH----------------------------HHHHh
Confidence 134566678888999999999999999999996654332221 12222
Q ss_pred hcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHH
Q psy10113 247 ANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHL 326 (596)
Q Consensus 247 a~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l 326 (596)
....+ .+.|..-.. .+.+.++++. |+ ..++.++++..++............. .....+
T Consensus 261 ~~~~~---~i~h~~~~~-~~~~~~~~~l----~~----~~~~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 318 (404)
T PF07969_consen 261 ARARG---RIEHAELID-PDDIERMAEL----GV----TASVQPHFLFSWGGEWYEERLGPERA----------RRIYPI 318 (404)
T ss_dssp HTCCH---EEEEHCBCC-HHHHHHHHHH----TT----EEEECCTHHHHETEETHHHHHHHHCG----------GGBTHH
T ss_pred hcccc---eeeccccCC-HHHHHHHHHh----CC----ccccChhHhhhccchhhhhhhhhHHH----------HHHhHH
Confidence 21111 566665433 3344555555 55 34444433333331111110000011 112345
Q ss_pred HHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHh------hccCCCCCHHHHHHHHhHhHHHH
Q psy10113 327 LTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEK------GVVPGILSPEKFVAVTSTNAAKI 400 (596)
Q Consensus 327 ~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~------~v~~~~l~~~e~v~~~T~n~Ak~ 400 (596)
..+++.|+.++++||+......... ++.......... ....+.+|++|+|+++|.|||++
T Consensus 319 ~~~~~~Gv~v~~gsD~p~~~~~P~~--------------~~~~~~~~~~~~~~~~~~~~~~~~ls~~eAl~~~T~~~A~~ 384 (404)
T PF07969_consen 319 RSLLDAGVRVALGSDAPVSPPNPFR--------------GIWAAVTRQMAGERSGPVLGPEQRLSLEEALRAYTSNPARA 384 (404)
T ss_dssp HHHHHCTTEEEE--TTTTSSCCHHH--------------HHHHHHHHHHCHHTHHHCCGGTGSSHHHHHHHHTTHHHHHH
T ss_pred HHHHhccCceecCcCCcccccCcch--------------hhhhhhccccccccccccccccccCCHHHHHHHHhHHHHHH
Confidence 6899999999999998632211110 011111111110 11137899999999999999999
Q ss_pred cCCCCCcccccCCCCccEEE
Q psy10113 401 FNLYPKKGVIAEGSDADIVV 420 (596)
Q Consensus 401 lgl~~~~G~I~~G~~ADlVi 420 (596)
+|+++++|+|++||.|||||
T Consensus 385 ~g~~~~~Gsl~~Gk~AD~vV 404 (404)
T PF07969_consen 385 LGLEDRKGSLEPGKLADFVV 404 (404)
T ss_dssp TT-TTTSSSSSTTSBS-EEE
T ss_pred cCCCCCcceECCCCCcCeEC
Confidence 99999999999999999997
No 116
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.37 E-value=1.8e-11 Score=123.16 Aligned_cols=251 Identities=19% Similarity=0.138 Sum_probs=135.8
Q ss_pred ccccccCCCccccCC------------CC----cchHHHHHHHHHhCCceEEeccccCCCCc----cHHHHHHHHHHHhc
Q psy10113 73 GIDPHTHFELELMGA------------TS----VDDFYHGTKAAVAGGTTTIIDFALPRKGE----SLIKTYESWRQKAD 132 (596)
Q Consensus 73 ~ID~HtHl~~~~~~~------------~~----~d~~~~g~~~al~~GtTti~D~~~~~~~~----~~~~a~~~~~~~~~ 132 (596)
|||+|+|+..+.... .+ ..+.......++++||||++++....... .....++...+...
T Consensus 1 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (275)
T cd01292 1 FIDTHVHLDGSALRGTRLNLELKEAEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAVAEAARASAG 80 (275)
T ss_pred CcccchhhHHHHHccCCCccccccccccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHHHHHHHHhcC
Confidence 799999986543221 11 23344567788999999999987544332 12222222222111
Q ss_pred cCceeeeeccccccC----CChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhh
Q psy10113 133 EKVCCDYALHVGITW----WSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEI 208 (596)
Q Consensus 133 ~~~~~~~~~~~~~~~----~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~ 208 (596)
......++++..... ..+...+++..... .|+..++....+.. ...+++.++++++.|+++|+++.+|+.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~gi~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~i~~H~~~~~~ 158 (275)
T cd01292 81 IRVVLGLGIPGVPAAVDEDAEALLLELLRRGLE-LGAVGLKLAGPYTA-TGLSDESLRRVLEEARKLGLPVVIHAGELPD 158 (275)
T ss_pred eeeEEeccCCCCccccchhHHHHHHHHHHHHHh-cCCeeEeeCCCCCC-CCCCcHHHHHHHHHHHHcCCeEEEeeCCccc
Confidence 111111222211100 01122233333322 47888876554322 1248899999999999999999999876431
Q ss_pred hHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEee
Q psy10113 209 IDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGET 288 (596)
Q Consensus 209 i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~ 288 (596)
. . ..+.+.+.+... +.++.+.|+.... .+.+...++. |+ +.++
T Consensus 159 ~--------------------~-------~~~~~~~~~~~~-~~~~~~~H~~~~~-~~~~~~~~~~----g~----~~~~ 201 (275)
T cd01292 159 P--------------------T-------RALEDLVALLRL-GGRVVIGHVSHLD-PELLELLKEA----GV----SLEV 201 (275)
T ss_pred C--------------------c-------cCHHHHHHHHhc-CCCEEEECCccCC-HHHHHHHHHc----CC----eEEE
Confidence 1 0 011122222222 6788899988642 3344555555 44 4555
Q ss_pred ccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchH
Q psy10113 289 LAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQ 368 (596)
Q Consensus 289 ~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e 368 (596)
++.+..... ........+..+++.|..+++|||+.+........ .+
T Consensus 202 ~~~~~~~~~--------------------~~~~~~~~~~~~~~~g~~~~lgTD~~~~~~~~~~~--------------~~ 247 (275)
T cd01292 202 CPLSNYLLG--------------------RDGEGAEALRRLLELGIRVTLGTDGPPHPLGTDLL--------------AL 247 (275)
T ss_pred CCccccccc--------------------CCcCCcccHHHHHHCCCcEEEecCCCCCCCCCCHH--------------HH
Confidence 554432221 00122344668899999999999986642110000 02
Q ss_pred HHHHHHHHhhccCCCCCHHHHHHHHhHhHHHH
Q psy10113 369 DRLSVIWEKGVVPGILSPEKFVAVTSTNAAKI 400 (596)
Q Consensus 369 ~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~ 400 (596)
.+...... ..+++.+++++++|.|||++
T Consensus 248 ~~~~~~~~----~~~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 248 LRLLLKVL----RLGLSLEEALRLATINPARA 275 (275)
T ss_pred HHHHHHHH----hcCCCHHHHHHHHhccccCC
Confidence 22211111 11279999999999999974
No 117
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=98.59 E-value=3.3e-06 Score=84.51 Aligned_cols=243 Identities=17% Similarity=0.088 Sum_probs=124.6
Q ss_pred ccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc-cCCChh
Q psy10113 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI-TWWSDQ 151 (596)
Q Consensus 73 ~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 151 (596)
+||+|+|+..... ..+...-.+.+.+.|+++++.+... .. ..+.+.+..+.. ....+-.++|... ..+.+.
T Consensus 1 ~~D~H~H~~~~~~----~~~~~~~l~~~~~~gv~~~v~~~~~--~~-~~~~~~~la~~~-~~i~~~~G~hP~~~~~~~~~ 72 (251)
T cd01310 1 LIDTHCHLDFPQF----DADRDDVLARAREAGVIKIIVVGTD--LK-SSKRALELAKKY-DNVYAAVGLHPHDADEHVDE 72 (251)
T ss_pred CEEeeeCCCchhh----ccCHHHHHHHHHHcCCCEEEEeCCC--HH-HHHHHHHHHHhC-CCeEEEEeeCcchhhcCCHH
Confidence 6899999964321 1233344556677888888765332 11 122222222222 2333445666321 111223
Q ss_pred HHHHHHHHHHHcCCCEE-EEEeecCCCcc---CCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcc
Q psy10113 152 VQQEMAELCEKHGVNSF-KTFMAYKGLYM---LSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGH 227 (596)
Q Consensus 152 ~~~e~~~lv~~~Gv~~~-k~~~~~~~~~~---~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~ 227 (596)
..+++++++...++..+ ++.+.+..... ...+.++.+++.|+++++++.+|+....
T Consensus 73 ~~~~l~~~~~~~~~~~IGeiGld~~~~~~~~~~q~~~~~~~~~~a~e~~~pv~iH~~~~~-------------------- 132 (251)
T cd01310 73 DLDLLELLAANPKVVAIGEIGLDYYRDKSPREVQKEVFRAQLELAKELNLPVVIHSRDAH-------------------- 132 (251)
T ss_pred HHHHHHHHhcCCCEEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeCch--------------------
Confidence 45677777654455444 33333221111 2345588899999999999999976421
Q ss_pred cCCChHHHHHHHHHHHHHHhcccC-CCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCcccc
Q psy10113 228 QLSRPEEVEAEAVTRACTIANQVD-CPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHD 306 (596)
Q Consensus 228 ~~~~p~~~e~~a~~~~i~la~~~~-~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~ 306 (596)
. ..+.++++.+ ....+.|..+.. .+.+..+.+. |+ +..+. .....
T Consensus 133 ----------~---~~~~l~~~~~~~~~~i~H~~~~~-~~~~~~~~~~----g~----~~~~~-------~~~~~----- 178 (251)
T cd01310 133 ----------E---DVLEILKEYGPPKRGVFHCFSGS-AEEAKELLDL----GF----YISIS-------GIVTF----- 178 (251)
T ss_pred ----------H---HHHHHHHhcCCCCCEEEEccCCC-HHHHHHHHHc----CC----EEEee-------eeecc-----
Confidence 1 1233444443 344455766532 2344444334 55 22222 11100
Q ss_pred ccccccCCCCCCCCCcHHHHHHHHhcC--CccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCC
Q psy10113 307 QAAHVLSPPLRPDETTPTHLLTLLNEN--ALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGIL 384 (596)
Q Consensus 307 ~~~~~~~Pplr~~~~~~~~l~~~l~~G--~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l 384 (596)
.....+..++..+ ..+.++||+.-.... .. .|-.+....+..++.++....++
T Consensus 179 --------------~~~~~~~~~~~~~~~dril~~TD~p~~~~~-~~----------~~~~~~~~~~~~~~~~la~~~gl 233 (251)
T cd01310 179 --------------KNANELREVVKEIPLERLLLETDSPYLAPV-PF----------RGKRNEPAYVKHVAEKIAELKGI 233 (251)
T ss_pred --------------CCCHHHHHHHHhCChHHEEEcccCCCCCCC-CC----------CCCCCCChhHHHHHHHHHHHHCc
Confidence 0111233444444 367999998422111 00 01112233344445544455789
Q ss_pred CHHHHHHHHhHhHHHHcC
Q psy10113 385 SPEKFVAVTSTNAAKIFN 402 (596)
Q Consensus 385 ~~~e~v~~~T~n~Ak~lg 402 (596)
+.+++.++.+.|++++||
T Consensus 234 ~~e~~~~~~~~N~~~ll~ 251 (251)
T cd01310 234 SVEEVAEVTTENAKRLFG 251 (251)
T ss_pred CHHHHHHHHHHHHHHHhC
Confidence 999999999999999986
No 118
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=98.54 E-value=6.6e-06 Score=82.41 Aligned_cols=125 Identities=16% Similarity=0.150 Sum_probs=68.5
Q ss_pred ccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCC-Chh
Q psy10113 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWW-SDQ 151 (596)
Q Consensus 73 ~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 151 (596)
+||+|+|+...... ++...-.+.+.+.|+++++++.... ... +.+.+..+... +..+-.++|...... ...
T Consensus 1 ~iD~H~Hl~~~~~~----~~~~~~~~~~~~~Gv~~~v~~~~~~--~~~-~~~~~~~~~~~-~i~~~~GihP~~~~~~~~~ 72 (252)
T TIGR00010 1 LIDAHCHLDFLDFE----EDVEEVIERAKAAGVTAVVAVGTDL--EDF-LRALELAEKYP-NVYAAVGVHPLDVDDDTKE 72 (252)
T ss_pred CEEeccCCCChhhc----cCHHHHHHHHHHcCCCEEEEecCCH--HHH-HHHHHHHHHCC-CEEEEEEeCcchhhcCCHH
Confidence 68999998632211 1344446677788999998653221 122 22222222223 566667777422111 234
Q ss_pred HHHHHHHHHHHcCCCEEEEE-eecCCCccC---CHHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 152 VQQEMAELCEKHGVNSFKTF-MAYKGLYML---SDGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 152 ~~~e~~~lv~~~Gv~~~k~~-~~~~~~~~~---~~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
..+++++++++.++..+... +++.....- ..+.+.+.++.|+++|.++.+|+..
T Consensus 73 ~~~~l~~~l~~~~~~~iGEiGld~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~ 130 (252)
T TIGR00010 73 DIKELERLAAHPKVVAIGETGLDYYKADEYKRRQEEVFRAQLQLAEELNLPVIIHARD 130 (252)
T ss_pred HHHHHHHHccCCCEEEEEecccCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEecC
Confidence 45566666654444444322 332111110 1256778899999999999999864
No 119
>PRK10812 putative DNAse; Provisional
Probab=98.43 E-value=3.3e-05 Score=78.15 Aligned_cols=249 Identities=15% Similarity=0.082 Sum_probs=129.1
Q ss_pred ccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhH
Q psy10113 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQV 152 (596)
Q Consensus 73 ~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (596)
+||+|+|+..+..... .++...-...|...|+..++... ..-.+...+++..... +....-+|+|..... .+..
T Consensus 3 ~iDtH~Hl~~~~~~~~-~~d~~~vl~~a~~~gv~~~~~~~--~~~~~~~~~~~l~~~~--~~v~~~~GiHP~~~~-~~~~ 76 (265)
T PRK10812 3 LVDSHCHLDGLDYQSL-HKDVDDVLAKAAARDVKFCLAVA--TTLPGYRHMRDLVGER--DNVVFSCGVHPLNQD-EPYD 76 (265)
T ss_pred eEEeccCCCCccchhh-hcCHHHHHHHHHHcCCCEEEEeC--CCHHHHHHHHHHHhhC--CCeEEEEEeCCCCCC-ChhH
Confidence 7999999964211111 23455557778888998875432 2112333333332222 235556777764322 2334
Q ss_pred HHHHHHHHHHcCCCEE-EEEeecCCCccCCH---HHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCccc
Q psy10113 153 QQEMAELCEKHGVNSF-KTFMAYKGLYMLSD---GELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQ 228 (596)
Q Consensus 153 ~~e~~~lv~~~Gv~~~-k~~~~~~~~~~~~~---~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~ 228 (596)
.+++++++....+..+ .+.++|.......+ +-|.+.++.|+++++++.+|+....
T Consensus 77 ~~~l~~~~~~~~vvaIGEiGLD~~~~~~~~~~Q~~vf~~ql~lA~e~~~Pv~iH~r~a~--------------------- 135 (265)
T PRK10812 77 VEELRRLAAEEGVVAMGETGLDYYYTPETKVRQQESFRHHIQIGRELNKPVIVHTRDAR--------------------- 135 (265)
T ss_pred HHHHHHHhcCCCEEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeCch---------------------
Confidence 5666666644344444 44555532111112 2377888999999999999987632
Q ss_pred CCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCcccccc
Q psy10113 229 LSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQA 308 (596)
Q Consensus 229 ~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~ 308 (596)
+.+...+.-......+. +.|+.+.. .+...++.+. |. ++++++...+.
T Consensus 136 ---------~~~l~iL~~~~~~~~~~-v~H~fsG~-~~~a~~~~~~----G~-----------~is~~g~~t~~------ 183 (265)
T PRK10812 136 ---------ADTLAILREEKVTDCGG-VLHCFTED-RETAGKLLDL----GF-----------YISFSGIVTFR------ 183 (265)
T ss_pred ---------HHHHHHHHhhcCCCCCE-EEEeecCC-HHHHHHHHHC----CC-----------EEEECeeeecC------
Confidence 11111111100011122 46777544 3444444444 66 33333322111
Q ss_pred ccccCCCCCCCCCcHHHHHHHHhcC--CccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCH
Q psy10113 309 AHVLSPPLRPDETTPTHLLTLLNEN--ALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSP 386 (596)
Q Consensus 309 ~~~~~Pplr~~~~~~~~l~~~l~~G--~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~ 386 (596)
..+.+.++++.+ ....+.||. |+.......|+ +|. -..+..+.+......+++.
T Consensus 184 -------------~~~~~~~~~~~ipldrlLlETD~-P~~~p~~~~g~------~n~----P~~i~~v~~~ia~l~g~~~ 239 (265)
T PRK10812 184 -------------NAEQLRDAARYVPLDRLLVETDS-PYLAPVPHRGK------ENQ----PAMVRDVAEYMAVLKGVSV 239 (265)
T ss_pred -------------ccHHHHHHHHhCChhhEEEecCC-CCCCCcCCCCC------CCC----cHHHHHHHHHHHHHhCCCH
Confidence 123455666665 478889996 33221111111 111 1122333333334467899
Q ss_pred HHHHHHHhHhHHHHcCCC
Q psy10113 387 EKFVAVTSTNAAKIFNLY 404 (596)
Q Consensus 387 ~e~v~~~T~n~Ak~lgl~ 404 (596)
+++.+.++.|+.++|++.
T Consensus 240 eei~~~~~~N~~~lf~~~ 257 (265)
T PRK10812 240 EELAQVTTDNFARLFHID 257 (265)
T ss_pred HHHHHHHHHHHHHHHCCC
Confidence 999999999999999984
No 120
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=98.39 E-value=3.2e-05 Score=76.71 Aligned_cols=214 Identities=18% Similarity=0.167 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHcCCCEEEEEeec----CCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcc
Q psy10113 152 VQQEMAELCEKHGVNSFKTFMAY----KGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGH 227 (596)
Q Consensus 152 ~~~e~~~lv~~~Gv~~~k~~~~~----~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~ 227 (596)
..+++++..++..+..+|.|-+- .....-+.+.++.+++...+.|+++.||.|-.+.....
T Consensus 83 ~peel~~a~~~g~i~a~KlYPaGaTTNS~~GV~~~~~~~pvle~Mq~~gmpLlvHGEvt~~~vDi--------------- 147 (344)
T COG0418 83 TPEELEEAKAKGVIRAVKLYPAGATTNSDSGVTDIEKIYPVLEAMQKIGMPLLVHGEVTDAEVDI--------------- 147 (344)
T ss_pred CHHHHHHHHhcCcEEEEEeccCCccccCcCCcCcHHHHHHHHHHHHHcCCeEEEecccCCccccc---------------
Confidence 45677776655447888887541 01111245679999999999999999998754321110
Q ss_pred cCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccc
Q psy10113 228 QLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQ 307 (596)
Q Consensus 228 ~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~ 307 (596)
..|.... .+.+..-+. .+.....+.+.|+.++++++.|+.+ +. .+.+.++++||.++-.+..-- ...
T Consensus 148 -fdrE~~F-i~~vl~pl~-~~fP~LKIV~EHiTT~dav~~v~~~-------~~--nlaATIT~hHL~~nrnd~l~G-gi~ 214 (344)
T COG0418 148 -FDREAAF-IESVLEPLR-QRFPKLKIVLEHITTKDAVEYVKDA-------NN--NLAATITPHHLLLNRNDMLVG-GIR 214 (344)
T ss_pred -hhhHHHH-HHHHHHHHH-hhCCcceEEEEEeccHHHHHHHHhc-------Cc--ceeeEeehhheeeehhhhhcC-CCC
Confidence 0000000 111111111 2334678999999999999998776 55 689999999998877665421 000
Q ss_pred cccccCCCCCCCCCcHHHHHHHHhcCC-ccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHH---HHHHHHHhhccCCC
Q psy10113 308 AAHVLSPPLRPDETTPTHLLTLLNENA-LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQD---RLSVIWEKGVVPGI 383 (596)
Q Consensus 308 ~~~~~~Pplr~~~~~~~~l~~~l~~G~-~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~---~~~~~~~~~v~~~~ 383 (596)
.-+.|-|=+.. ..++++|.++..+|. ...+|||.+|+....|.- ..|++|+-. .++.+.+-+-+.+
T Consensus 215 Ph~fClPilKr-~~hr~AL~~aa~sg~~kfFlGtDSAPH~~~~Ke~--------~cgcAG~fsap~al~~~AevFE~~n- 284 (344)
T COG0418 215 PHLFCLPILKR-ETHREALREAATSGHPKFFLGTDSAPHARSRKES--------ACGCAGIFSAPFALPLYAEVFEEEN- 284 (344)
T ss_pred cceeeeccccc-hhhHHHHHHHHhcCCCcEEecCCCCCCccccccc--------ccccccccccHhHHHHHHHHHHHhc-
Confidence 12334444443 788999999988885 799999999998776642 235555433 3333333222333
Q ss_pred CCHHHHHHHHhHhHHHHcCCC
Q psy10113 384 LSPEKFVAVTSTNAAKIFNLY 404 (596)
Q Consensus 384 l~~~e~v~~~T~n~Ak~lgl~ 404 (596)
.++..=+.+|.|+.+++|+.
T Consensus 285 -aL~~LeaF~S~nGp~fY~lp 304 (344)
T COG0418 285 -ALDNLEAFASDNGPKFYGLP 304 (344)
T ss_pred -HHHHHHHHHhhcCcceeccc
Confidence 34555567889999999994
No 121
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=98.35 E-value=4.2e-05 Score=78.65 Aligned_cols=261 Identities=17% Similarity=0.133 Sum_probs=127.6
Q ss_pred CccccccCCCccccC---------CCCcchH---HHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeee
Q psy10113 72 GGIDPHTHFELELMG---------ATSVDDF---YHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDY 139 (596)
Q Consensus 72 G~ID~HtHl~~~~~~---------~~~~d~~---~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 139 (596)
|++.+|=|+...+.. ....+++ ....+.+.+.|+|+++|......+.......+..++ ......+..
T Consensus 1 g~~~~heh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvttiv~~~~~~~~~~~~~~~~~~~~-~g~~v~~~~ 79 (293)
T cd00530 1 GVTLTHEHLIIDSSGFVRDPPEVDDFDLADVEAAKEELKRFRAHGGRTIVDATPPGIGRDVEKLAEVARA-TGVNIVAAT 79 (293)
T ss_pred CcccccCCeeecChhhccCcccccccchhhHHHHHHHHHHHHHcCCCeEEEcCCcccCcCHHHHHHHHHH-hCCcEEEec
Confidence 677888887433211 1222222 344566788999999988643223344444333333 222355566
Q ss_pred eccccccC---CChhHHHHHHH----HHHH----cCCC--EEE-EEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 140 ALHVGITW---WSDQVQQEMAE----LCEK----HGVN--SFK-TFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 140 ~~~~~~~~---~~~~~~~e~~~----lv~~----~Gv~--~~k-~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
|+|..... ..+...+++.+ .+.+ .++. .++ +.+++ .......+.|.+.++.|+++|+++++|+..
T Consensus 80 G~hp~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~IGEigld~-~~~~~q~~~f~~~~~lA~~~~~Pv~iH~~~ 158 (293)
T cd00530 80 GFYKDAFYPEWVRLRSVEELTDMLIREIEEGIEGTGIKAGIIKEAGGSP-AITPLEEKVLRAAARAQKETGVPISTHTQA 158 (293)
T ss_pred ccCCCccChHHHhhCCHHHHHHHHHHHHHhccccCCcCceEEEEeecCC-CCCHHHHHHHHHHHHHHHHHCCeEEEcCCC
Confidence 66653311 11111122222 2211 2221 121 22232 122223345778899999999999999875
Q ss_pred h-hhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCC---CeEEEecCcHHHHHHHHHHHHHHhhcCCc
Q psy10113 206 G-EIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDC---PLYVVHIMSKAAGDAMAYKRKELMKKGKH 281 (596)
Q Consensus 206 ~-~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~---p~~i~hv~s~~~~~~i~~a~~~~~~~G~~ 281 (596)
. ....+. +.+....+. ++.+.|+......+.+..+.+. |.
T Consensus 159 ~~~~~~~~-------------------------------l~~l~~~g~~~~~~vi~H~~~~~~~~~~~~~~~~----G~- 202 (293)
T cd00530 159 GLTMGLEQ-------------------------------LRILEEEGVDPSKVVIGHLDRNDDPDYLLKIAAL----GA- 202 (293)
T ss_pred CccccHHH-------------------------------HHHHHHcCCChhheEEeCCCCCCCHHHHHHHHhC----CC-
Confidence 3 111111 111122232 2467788622223445555555 66
Q ss_pred eeeEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCC--ccEEeCCCCCCChhhhhhCCCCCCc
Q psy10113 282 CTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENA--LQTTGSDNCTFNKNQKELGKDSFTH 359 (596)
Q Consensus 282 ~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~--~~~~gsD~~~~~~~~~~~g~~~f~~ 359 (596)
++.+++......+ ..++ +....+.+.++++.|. .++++||..-.... ...+
T Consensus 203 ----------~i~~~~~~~~~~~-------~~~~---~~~~~~~l~~~~~~~~~d~ill~TD~p~~~~~-~~~~------ 255 (293)
T cd00530 203 ----------YLEFDGIGKDKIF-------GYPS---DETRADAVKALIDEGYGDRLLLSHDVFRKSYL-EKRY------ 255 (293)
T ss_pred ----------EEEeCCCCccccc-------CCCC---HHHHHHHHHHHHHCCCcCCEEEeCCcCchhhh-hhcc------
Confidence 2222221111000 0000 0122455778888886 45999996332211 1111
Q ss_pred CCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHc
Q psy10113 360 IPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIF 401 (596)
Q Consensus 360 ~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~l 401 (596)
+-++... +...+...+...+++.+++.++++.||+++|
T Consensus 256 ---~~~~~~~-~~~~~~~~~~~~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 256 ---GGHGYDY-ILTRFIPRLRERGVTEEQLDTILVENPARFL 293 (293)
T ss_pred ---CCCChHH-HHHHHHHHHHHcCCCHHHHHHHHHHCHHHhC
Confidence 1122222 1222333445678899999999999999986
No 122
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=98.20 E-value=0.00019 Score=71.76 Aligned_cols=244 Identities=17% Similarity=0.113 Sum_probs=132.2
Q ss_pred ccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc-cCCChh
Q psy10113 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI-TWWSDQ 151 (596)
Q Consensus 73 ~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 151 (596)
+||+|+|+..... .++...-...|...|++-++.... .-.+...+++.+.... ..++..|+|... ..+.+.
T Consensus 3 liDtH~HL~~~~~----~~d~~~vi~~a~~~gv~~~~~~g~--~~~~~~~~~~la~~y~--~v~~~~G~HP~~~~~~~~~ 74 (256)
T COG0084 3 LIDTHCHLDFEEF----DEDRDEVIARAREAGVKKMVVVGT--DLEDFKRALELAEKYP--NVYAAVGVHPLDADEHSEE 74 (256)
T ss_pred cEEeeeCCCchhh----cCCHHHHHHHHHHcCCcEEEEeec--CHHHHHHHHHHHHhCC--CeEEEEeeCCCccccccHH
Confidence 7999999975322 234445566778889888864432 2223334444444433 577788888765 122366
Q ss_pred HHHHHHHHHHH-cCCCEEE-EEeecCCCccC----CHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCC
Q psy10113 152 VQQEMAELCEK-HGVNSFK-TFMAYKGLYML----SDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPE 225 (596)
Q Consensus 152 ~~~e~~~lv~~-~Gv~~~k-~~~~~~~~~~~----~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~ 225 (596)
..+++.+++.. ..+..+. +.++|...... -.+-+.+.++.|++++.++.+|+.+..
T Consensus 75 ~~~~l~~~~~~~~~vvaIGEiGLDy~~~~~~~~~~Q~~~F~~ql~lA~~~~lPviIH~R~A~------------------ 136 (256)
T COG0084 75 DLEELEQLAEHHPKVVAIGEIGLDYYWDKEPDKERQEEVFEAQLELAKELNLPVIIHTRDAH------------------ 136 (256)
T ss_pred HHHHHHHHHhcCCCeEEEEecccCccccccccHHHHHHHHHHHHHHHHHcCCCEEEEccccH------------------
Confidence 77788888763 3443332 23344322221 123377888999999999999987632
Q ss_pred cccCCChHHHHHHHHHHHHHHhcccC-CCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCcc
Q psy10113 226 GHQLSRPEEVEAEAVTRACTIANQVD-CPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTW 304 (596)
Q Consensus 226 ~~~~~~p~~~e~~a~~~~i~la~~~~-~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~ 304 (596)
+. .+.+.+..+ ..--+.|+.|.. .+..+++-+. |. ++++.|...+..
T Consensus 137 ------------~d---~~~iL~~~~~~~~gi~HcFsGs-~e~a~~~~d~----G~-----------yisisG~itfk~- 184 (256)
T COG0084 137 ------------ED---TLEILKEEGAPVGGVLHCFSGS-AEEARKLLDL----GF-----------YISISGIVTFKN- 184 (256)
T ss_pred ------------HH---HHHHHHhcCCCCCEEEEccCCC-HHHHHHHHHc----Ce-----------EEEECceeecCC-
Confidence 11 222222323 123356877755 2333333333 54 344444333321
Q ss_pred ccccccccCCCCCCCCCcHHHHHHHHhcC--CccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCC
Q psy10113 305 HDQAAHVLSPPLRPDETTPTHLLTLLNEN--ALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPG 382 (596)
Q Consensus 305 ~~~~~~~~~Pplr~~~~~~~~l~~~l~~G--~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~ 382 (596)
...+.+.++.= ....+-||. |+.......|+. .- ...+..+.+.+....
T Consensus 185 ------------------a~~~~ev~~~iPldrLL~ETDs-Pyl~P~p~rGkr---Ne-------P~~v~~v~~~iAelk 235 (256)
T COG0084 185 ------------------AEKLREVARELPLDRLLLETDA-PYLAPVPYRGKR---NE-------PAYVRHVAEKLAELK 235 (256)
T ss_pred ------------------cHHHHHHHHhCCHhHeEeccCC-CCCCCcCCCCCC---CC-------chHHHHHHHHHHHHh
Confidence 11122222221 245677775 333221112211 11 223344444455566
Q ss_pred CCCHHHHHHHHhHhHHHHcCC
Q psy10113 383 ILSPEKFVAVTSTNAAKIFNL 403 (596)
Q Consensus 383 ~l~~~e~v~~~T~n~Ak~lgl 403 (596)
+++++++.+.+|.|.-++|++
T Consensus 236 ~~~~eeva~~t~~N~~~lf~~ 256 (256)
T COG0084 236 GISAEEVAEITTENAKRLFGL 256 (256)
T ss_pred CCCHHHHHHHHHHHHHHHhcC
Confidence 899999999999999999985
No 123
>PRK10425 DNase TatD; Provisional
Probab=98.17 E-value=0.00022 Score=71.86 Aligned_cols=125 Identities=11% Similarity=0.118 Sum_probs=71.0
Q ss_pred ccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc-cCCChh
Q psy10113 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI-TWWSDQ 151 (596)
Q Consensus 73 ~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 151 (596)
+||+|+|+...-. .++...-...|...||..++.... .-.+..++.+..+.. ....+-+|+|... ..+.+.
T Consensus 1 ~iDtH~HL~~~~~----~~d~~~vl~~a~~~gv~~~i~~~~--~~~~~~~~~~l~~~~--~~v~~~~GiHP~~~~~~~~~ 72 (258)
T PRK10425 1 MFDIGVNLTSSQF----AKDRDDVVARAFAAGVNGMLITGT--NLRESQQAQKLARQY--PSCWSTAGVHPHDSSQWQAA 72 (258)
T ss_pred CEEeeeCcCChhh----hccHHHHHHHHHHCCCCEEEEeCC--CHHHHHHHHHHHHhC--CCEEEEEEeCcCccccCCHH
Confidence 6899999964211 134555577778889888764322 212333333333322 2355667888643 233455
Q ss_pred HHHHHHHHHHHcCCCEEE-EEeecCCCccCCH---HHHHHHHHHHHhcCCeEEEecCc
Q psy10113 152 VQQEMAELCEKHGVNSFK-TFMAYKGLYMLSD---GELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 152 ~~~e~~~lv~~~Gv~~~k-~~~~~~~~~~~~~---~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
..+.+.++.+...+..+. +.++|........ +-|.+.++.|++++.++.+|+.+
T Consensus 73 ~~~~l~~~~~~~~~vaIGEiGLDy~~~~~~~~~Q~~vF~~ql~lA~~~~~Pv~iH~r~ 130 (258)
T PRK10425 73 TEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLAIAAELNMPVFMHCRD 130 (258)
T ss_pred HHHHHHHhccCCCEEEEeeeeeccccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 566676666432222232 4445431111112 23677889999999999999875
No 124
>KOG2902|consensus
Probab=98.12 E-value=0.00016 Score=69.40 Aligned_cols=283 Identities=18% Similarity=0.155 Sum_probs=168.1
Q ss_pred EEeeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhc---cCceeeeecccc
Q psy10113 68 YVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKAD---EKVCCDYALHVG 144 (596)
Q Consensus 68 ~V~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~ 144 (596)
+-+|+.-|+|+|+...-|-....- -...+|+.-..=|.+-.+.....++...+++... .+...-.+++.
T Consensus 5 l~i~~~~DmHvHlR~g~ml~aVvP-------~~a~ggvs~AyvMPNL~PPiTt~da~i~YkK~i~kL~skttfLMslYL- 76 (344)
T KOG2902|consen 5 LTITQPDDMHVHLRDGDMLHAVVP-------HSASGGVSRAYVMPNLKPPITTTDAAIIYKKFIMKLPSKTTFLMSLYL- 76 (344)
T ss_pred EecCCccceeEEeccCCeeeeecc-------ccccCceeEEEEcCCCCCCcchHHHHHHHHHHHHhcCccceeEEEEee-
Confidence 347889999999965433211111 1245778877656544454555555555544433 22222223322
Q ss_pred ccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCc-----cCC--HHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHH
Q psy10113 145 ITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLY-----MLS--DGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLL 217 (596)
Q Consensus 145 ~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~-----~~~--~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~ 217 (596)
..+...+++.+..+..++..+|.|-+ |.. .++ .+.++-+|+...+.++++.+|-|-...
T Consensus 77 ---s~~ttPe~I~eAa~~~~irgVK~YPa--GaTTNS~~GV~~~f~~fyPvf~aMqe~nm~LnvHGEvpps--------- 142 (344)
T KOG2902|consen 77 ---SDKTTPEEIREAAESGVIRGVKLYPA--GATTNSQDGVTDLFGKFYPVFEAMQEQNMPLNVHGEVPPS--------- 142 (344)
T ss_pred ---cCCCCHHHHHHHHHhCceeeEEeccC--cccccccccccccchhhhHHHHHHHHcCceEEecCCCCCc---------
Confidence 22234556666666667888898754 221 122 356888999999999999999765321
Q ss_pred HcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCC
Q psy10113 218 AAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHA 297 (596)
Q Consensus 218 ~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~ 297 (596)
..+|...+.+.. ..++.... .+.-+..+.+.|+.+.++.+.++.++ +. .|-+.+.++||.+.-
T Consensus 143 ------~D~~Vf~aE~~F-lptll~Lh--qrfP~LKivlEHcTt~dAv~~ve~a~------~~--sVaaTvTahHL~Lt~ 205 (344)
T KOG2902|consen 143 ------IDGHVFDAEKIF-LPTLLQLH--QRFPQLKIVLEHCTTMDAVNFVESAK------EG--SVAATVTAHHLLLTR 205 (344)
T ss_pred ------cCCceecchhhh-HHHHHHHH--HhCccceeHHHhcccHHHHHHHHhhc------CC--ceeeEeehheeEEeh
Confidence 123333332211 23333321 23346778889999999999998875 44 888999999998876
Q ss_pred CCCCCccccccccccCCCCCCCCCcHHHHHHHHhcCC-ccEEeCCCCCCChhhhhhCCCCCCcCCCCCcch---HHHHHH
Q psy10113 298 NQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENA-LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGV---QDRLSV 373 (596)
Q Consensus 298 ~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~-~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~---e~~~~~ 373 (596)
.+ |.......+.|-... ..++++|.++.-+|. ...+|||.+|.....|+-. .|++|+ ...++.
T Consensus 206 ~d----wqg~P~nfCkPVaK~-e~dr~AlvkAatSg~pkFFfGsDSAPHprs~K~~~--------~~cAGvysqpfA~sy 272 (344)
T KOG2902|consen 206 ND----WQGQPHNFCKPVAKR-EIDREALVKAATSGSPKFFFGSDSAPHPRSRKESS--------CGCAGVYSQPFALSY 272 (344)
T ss_pred hh----hcCCCcccccccccC-cccHHHHHHHHhcCCCceeecCCCCCCcccccccC--------CCcceeecccchHHH
Confidence 65 332222334443333 678899999888886 6899999999987766421 144443 223333
Q ss_pred HHHhhccCCCCCHHHHHHHHhHhHHHHcCCC
Q psy10113 374 IWEKGVVPGILSPEKFVAVTSTNAAKIFNLY 404 (596)
Q Consensus 374 ~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~ 404 (596)
+.+-+-+.|.++.- -..++.++-+.+++.
T Consensus 273 ~A~VFde~gaLd~L--k~F~s~fG~~FY~~p 301 (344)
T KOG2902|consen 273 YAKVFDEAGALDKL--KAFTSFFGPDFYGLP 301 (344)
T ss_pred HHHHHhhhchHHHH--hhhHhhcCcceeccc
Confidence 33333345544433 334666777777773
No 125
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=98.05 E-value=0.00044 Score=72.26 Aligned_cols=57 Identities=21% Similarity=0.126 Sum_probs=39.1
Q ss_pred HHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCC
Q psy10113 326 LLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLY 404 (596)
Q Consensus 326 l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~ 404 (596)
+.++++.|+.+++|||...++.. .|...+..++...++++.+ +..+|.|+++..-+.
T Consensus 257 i~~l~~~Gv~v~igTD~~~~~~~---------------------~l~~e~~~a~~~~~l~~~e-l~~~~~na~~~~f~~ 313 (324)
T TIGR01430 257 LRRFLEAGVKVTLNSDDPAYFGS---------------------YLTEEYEIAAKHAGLTEEE-LKQLARNALEGSFLS 313 (324)
T ss_pred HHHHHHCCCEEEECCCCCcccCC---------------------CHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHhCCC
Confidence 34799999999999998654321 1122222333456899999 778899999877653
No 126
>PRK09875 putative hydrolase; Provisional
Probab=98.04 E-value=0.00065 Score=69.43 Aligned_cols=256 Identities=15% Similarity=0.097 Sum_probs=136.7
Q ss_pred CccccccCCCccccC-----CCCcchHHHHH---HHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc
Q psy10113 72 GGIDPHTHFELELMG-----ATSVDDFYHGT---KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV 143 (596)
Q Consensus 72 G~ID~HtHl~~~~~~-----~~~~d~~~~g~---~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 143 (596)
|+..+|=|+...+.+ ....+++.... +...+.|..||+|.....-| .-.+.+++..+.......+.-|++.
T Consensus 7 G~tl~HEHl~~~~~~~~~~~~~~l~~~~~~~~el~~~~~~Gg~tiVd~T~~g~G-Rd~~~l~~is~~tgv~Iv~~TG~y~ 85 (292)
T PRK09875 7 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMG-RNAQFMLDVMRETGINVVACTGYYQ 85 (292)
T ss_pred CcceecCCeEecChhhcCCcccccccHHHHHHHHHHHHHhCCCeEEecCCCccC-cCHHHHHHHHHHhCCcEEEcCcCCC
Confidence 788899998443221 11233344333 34456899999998655544 3345555555555555666666664
Q ss_pred cc--cCC-ChhHHHHHHHHH-HH--cCCC-------EE-EEEeecCCCccCCHHH---HHHHHHHHHhcCCeEEEecCch
Q psy10113 144 GI--TWW-SDQVQQEMAELC-EK--HGVN-------SF-KTFMAYKGLYMLSDGE---LYDAFSAIKNLGAIAMVHAENG 206 (596)
Q Consensus 144 ~~--~~~-~~~~~~e~~~lv-~~--~Gv~-------~~-k~~~~~~~~~~~~~~~---l~~~~~~a~~~g~~~~vHae~~ 206 (596)
.. +.| .....+++.+++ ++ .|+. -+ ++..++. .+++.+ |+...+.+++.|+++.+|...+
T Consensus 86 ~~~~p~~~~~~~~e~la~~~i~ei~~Gi~gt~ikaGvIGeiG~~~~---~it~~E~kvl~Aaa~a~~~TG~pi~~Ht~~~ 162 (292)
T PRK09875 86 DAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGSSEG---KITPLEEKVFIAAALAHNQTGRPISTHTSFS 162 (292)
T ss_pred CccCCHHHhcCCHHHHHHHHHHHHHHhhccCCCcccEEEEEecCCC---CCCHHHHHHHHHHHHHHHHHCCcEEEcCCCc
Confidence 42 222 111223333322 11 1322 12 2222221 244443 6666777888999999996553
Q ss_pred hhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCC---CeEEEecCcHHHHHHHHHHHHHHhhcCCcee
Q psy10113 207 EIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDC---PLYVVHIMSKAAGDAMAYKRKELMKKGKHCT 283 (596)
Q Consensus 207 ~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~---p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~~ 283 (596)
....+. +++..+.|+ ++.+.|+......+.+....+. |.
T Consensus 163 ~~g~e~-------------------------------l~il~e~Gvd~~rvvi~H~d~~~d~~~~~~l~~~----G~--- 204 (292)
T PRK09875 163 TMGLEQ-------------------------------LALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDL----GA--- 204 (292)
T ss_pred cchHHH-------------------------------HHHHHHcCcCcceEEEeCCCCCCCHHHHHHHHHc----CC---
Confidence 211111 223334454 5778888755555566665555 76
Q ss_pred eEEeeccceeecCCCCCCCccccccccccCCCCCCCCCcHHHHHHHHhcC--CccEEeCCCCCCChhhhhhCCCCCCcCC
Q psy10113 284 LYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNEN--ALQTTGSDNCTFNKNQKELGKDSFTHIP 361 (596)
Q Consensus 284 v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G--~~~~~gsD~~~~~~~~~~~g~~~f~~~p 361 (596)
|.+ +|.-... . +.++....+.+..+++.| ..+.+++|....+.. .+
T Consensus 205 -~l~-------fD~~g~~-------~------~~pd~~r~~~i~~L~~~Gy~drilLS~D~~~~~~~-----------~~ 252 (292)
T PRK09875 205 -YVQ-------FDTIGKN-------S------YYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHL-----------KA 252 (292)
T ss_pred -EEE-------eccCCCc-------c------cCCHHHHHHHHHHHHhcCCCCeEEEeCCCCCcccc-----------cc
Confidence 222 2210000 0 001112245666777776 578889997433211 12
Q ss_pred CCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcC
Q psy10113 362 NGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFN 402 (596)
Q Consensus 362 ~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lg 402 (596)
+|-.|...-+.....++... +++.+++=++...||+++|+
T Consensus 253 ~gg~G~~~i~~~~ip~L~~~-Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 253 NGGYGYDYLLTTFIPQLRQS-GFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred cCCCChhHHHHHHHHHHHHc-CCCHHHHHHHHHHCHHHHhC
Confidence 33345555555444444333 68999999999999999985
No 127
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria.
Probab=98.03 E-value=5.4e-06 Score=72.35 Aligned_cols=78 Identities=22% Similarity=0.354 Sum_probs=57.5
Q ss_pred CCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHH----HHHHHHcC--CCCCCcccCCChHHHHHHHHHHHHHHhc
Q psy10113 175 KGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKN----TQKLLAAG--IKGPEGHQLSRPEEVEAEAVTRACTIAN 248 (596)
Q Consensus 175 ~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~----~~~l~~~G--i~~~~~~~~~~p~~~e~~a~~~~i~la~ 248 (596)
.+.+......+++.++. .+++..+..||+++.++... .+.-..+| +.| ..|.+.+.|.+.+++
T Consensus 58 dg~giq~~~lm~eamk~-a~l~~~i~ahceDd~l~~~g~v~~ge~~q~~g~~L~G----------~cEs~~~~rd~lLak 126 (142)
T PF12890_consen 58 DGYGIQIQLLMYEAMKK-AELDQEIVAHCEDDELTNGGVVHDGELPQFLGVYLKG----------NCESVQCARDVLLAK 126 (142)
T ss_pred CCceeeeHHHHHHHHHH-HHcccHHHHhhcccccccccccccchhhHHhCCcCCC----------cchHHHHHHHHHhhh
Confidence 34444566678889998 89999999999987655532 23333444 233 336678889999999
Q ss_pred ccCCCeEEEecCcHH
Q psy10113 249 QVDCPLYVVHIMSKA 263 (596)
Q Consensus 249 ~~~~p~~i~hv~s~~ 263 (596)
..+|..||.|+++++
T Consensus 127 ~~g~~yhVchvstke 141 (142)
T PF12890_consen 127 ATGCHYHVCHVSTKE 141 (142)
T ss_pred ccCCcEEEEEEeccC
Confidence 999999999998864
No 128
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=98.01 E-value=0.00073 Score=68.11 Aligned_cols=127 Identities=18% Similarity=0.167 Sum_probs=69.8
Q ss_pred eCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccccc-CCC
Q psy10113 71 PGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGIT-WWS 149 (596)
Q Consensus 71 PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~ 149 (596)
+.+||+|+|+..... .++...-...|...|++.++.... .-.+...+++..+.. .+..+-+|+|.... .+.
T Consensus 3 ~~~iD~HcHl~~~~~----~~~~~~~l~~a~~~gv~~~~~~~~--~~~~~~~~~~l~~~~--~~v~~~~GiHP~~~~~~~ 74 (258)
T PRK11449 3 CRFIDTHCHFDFPPF----SGDEEASLQRAAQAGVGKIIVPAT--EAENFARVLALAERY--QPLYAALGLHPGMLEKHS 74 (258)
T ss_pred ceEEEeccCCCChhh----ccCHHHHHHHHHHCCCCEEEEeeC--CHHHHHHHHHHHHhC--CCEEEEEeeCcCccccCC
Confidence 458999999964211 123444456677889988864422 112333333333222 23566678886432 333
Q ss_pred hhHHHHHHHHHHHc--CCCEE-EEEeecCCCcc---CCHHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 150 DQVQQEMAELCEKH--GVNSF-KTFMAYKGLYM---LSDGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 150 ~~~~~e~~~lv~~~--Gv~~~-k~~~~~~~~~~---~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
+...+++++++... .+..+ -+.++|..... .-.+-|.+.++.|++++.++.+|+..
T Consensus 75 ~~~~~~l~~~l~~~~~~~~aIGEiGLD~~~~~~~~~~Q~~vf~~ql~lA~~~~~Pv~iH~r~ 136 (258)
T PRK11449 75 DVSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRR 136 (258)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecccCCCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence 44556666655321 12222 12233321111 11234778899999999999999876
No 129
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=97.95 E-value=0.00094 Score=69.79 Aligned_cols=26 Identities=19% Similarity=0.298 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 180 LSDGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 180 ~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
.+.+++..+++.|+++|+++.+|+.+
T Consensus 170 ~~~~~~~~~~~~A~~~g~~v~~H~~E 195 (325)
T cd01320 170 FPPEKFVRAFQRAREAGLRLTAHAGE 195 (325)
T ss_pred CCHHHHHHHHHHHHHCCCceEEeCCC
Confidence 47889999999999999999999854
No 130
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=97.76 E-value=0.0016 Score=65.68 Aligned_cols=125 Identities=16% Similarity=0.135 Sum_probs=69.4
Q ss_pred cccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCC-ChhH
Q psy10113 74 IDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWW-SDQV 152 (596)
Q Consensus 74 ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 152 (596)
||+|+|+..... .++.......+.+.|++.++...... .+.. ...++.........+-+|+|...... .+..
T Consensus 1 iD~H~Hl~~~~~----~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~-~~~~~~~~~~~~v~~~~GiHP~~~~~~~~~~ 73 (255)
T PF01026_consen 1 IDAHCHLDSPRF----EEDRPEVLERAREAGVSAIIIVSTDP--EDWE-RVLELASQYPDRVYPALGIHPWEAHEVNEED 73 (255)
T ss_dssp EEEEE-TTSGGG----TTTHHHHHHHHHHTTEEEEEEEESSH--HHHH-HHHHHHHHTTTEEEEEE---GGGGGGHSHHH
T ss_pred CcCccCCCChhh----CcCHHHHHHHHHHcCCCEEEEcCCCH--HHhH-HHHHHHhcCCCeEEEEecCCcchhhhhhHHH
Confidence 799999965211 23355556778889999886442221 1222 22222222233366778888644332 4556
Q ss_pred HHHHHHH--HHHcCCCEE-EEEeecCCCccCC----HHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 153 QQEMAEL--CEKHGVNSF-KTFMAYKGLYMLS----DGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 153 ~~e~~~l--v~~~Gv~~~-k~~~~~~~~~~~~----~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
.+.++++ .....+..+ -+.+++......+ .+-|.+.++.|++++.++.+|+..
T Consensus 74 ~~~l~~l~~~~~~~~~aIGEiGLD~~~~~~~~~~~Q~~vF~~ql~lA~~~~~pv~iH~r~ 133 (255)
T PF01026_consen 74 LEELEELINLNRPKVVAIGEIGLDYYWRNEEDKEVQEEVFERQLELAKELNLPVSIHCRK 133 (255)
T ss_dssp HHHHHHHHHHTSTTEEEEEEEEEETTTTSSSGHHHHHHHHHHHHHHHHHHTCEEEEEEES
T ss_pred HHHHHHHHHhccccceeeeeeccCcccccCCcHHHHHHHHHHHHHHHHHhCCcEEEecCC
Confidence 6777777 433344334 3455652111111 233778899999999999999887
No 131
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=97.51 E-value=0.0012 Score=62.93 Aligned_cols=125 Identities=19% Similarity=0.207 Sum_probs=69.0
Q ss_pred ccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHH-------hccCceeeeecccc-
Q psy10113 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQK-------ADEKVCCDYALHVG- 144 (596)
Q Consensus 73 ~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~-------~~~~~~~~~~~~~~- 144 (596)
+||+|+|+.. ...+|+...+...++.=+|...|..-....+.+.+-++....+ +..+..+..|+|..
T Consensus 2 ~iD~HiH~d~-----r~~eDlekMa~sGI~~Vit~AhdP~~~~~~~v~~~h~~rl~~~E~~Ra~~~Gl~~~vavGvHPr~ 76 (254)
T COG1099 2 YIDSHIHLDV-----RGFEDLEKMALSGIREVITLAHDPYPMKTAEVYLDHFRRLLGVEPERAEKAGLKLKVAVGVHPRA 76 (254)
T ss_pred cccccccccc-----ccHHHHHHHHHhChhhhhhcccCCCCcccHHHHHHHHHHHHccchhhHHhhCceeeEEeccCCCC
Confidence 6999999854 3456665544333333344444432222222333333322211 12245566677653
Q ss_pred ccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHH---HHHHHHHHHhcCCeEEEecCch
Q psy10113 145 ITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGE---LYDAFSAIKNLGAIAMVHAENG 206 (596)
Q Consensus 145 ~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~---l~~~~~~a~~~g~~~~vHae~~ 206 (596)
++..-+...++++.+....++..+. .-|.-..++++ |++-++.|++++.++.+|....
T Consensus 77 iP~e~~~~l~~L~~~l~~e~VvAiG----EiGLe~~t~~E~evf~~QL~LA~e~dvPviVHTPr~ 137 (254)
T COG1099 77 IPPELEEVLEELEELLSNEDVVAIG----EIGLEEATDEEKEVFREQLELARELDVPVIVHTPRR 137 (254)
T ss_pred CCchHHHHHHHHHhhcccCCeeEee----ecccccCCHHHHHHHHHHHHHHHHcCCcEEEeCCCC
Confidence 3333344566666666544554443 23444556655 7788999999999999997543
No 132
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=97.42 E-value=0.014 Score=58.78 Aligned_cols=237 Identities=18% Similarity=0.137 Sum_probs=122.9
Q ss_pred HHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc--cCCCh-hHHHHHHHHH-HH--cCC------
Q psy10113 98 KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI--TWWSD-QVQQEMAELC-EK--HGV------ 165 (596)
Q Consensus 98 ~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~e~~~lv-~~--~Gv------ 165 (596)
+...+.|.-||+|+....-|-......+-. +.......+--|++... +.|-. ...+++.+++ ++ .|+
T Consensus 55 ~~~~a~Gg~TIVD~T~~~~GRdv~~m~~vs-~atglnIV~~TGfy~~~~~p~~~~~~~i~~~ae~~v~ei~~Gi~gT~ik 133 (316)
T COG1735 55 KRLMARGGQTIVDATNIGIGRDVLKMRRVA-EATGLNIVAATGFYKAAFHPEYFALRPIEELAEFVVKEIEEGIAGTGIK 133 (316)
T ss_pred HHHHHcCCCeEeeCCccccCcCHHHHHHHH-HHhCCcEEEeccccccccchhHHhhCCHHHHHHHHHHHHHhcccCCccc
Confidence 345679999999997666665544433333 33334455555554432 11211 1123333332 11 243
Q ss_pred -CEEEEEeecCCCccCCHHH---HHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHH
Q psy10113 166 -NSFKTFMAYKGLYMLSDGE---LYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVT 241 (596)
Q Consensus 166 -~~~k~~~~~~~~~~~~~~~---l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~ 241 (596)
..+|..-.+.+ .++.| |+.+.+..++.|+++.+|.+.+..-.+.++-+.+.|++-
T Consensus 134 AGiIk~~~~~~~---iTp~Eek~lrAaA~A~~~Tg~Pi~tHt~~gt~g~eq~~il~~egvdl------------------ 192 (316)
T COG1735 134 AGIIKEAGGSPA---ITPLEEKSLRAAARAHKETGAPISTHTPAGTMGLEQLRILAEEGVDL------------------ 192 (316)
T ss_pred cceeeeccCccc---CCHHHHHHHHHHHHHhhhcCCCeEEeccchhhhHHHHHHHHHcCCCh------------------
Confidence 23343333433 44433 666666777889999999887664444445555555431
Q ss_pred HHHHHhcccCCCeEEEecC-cHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCccccccccccCCCCCCCC
Q psy10113 242 RACTIANQVDCPLYVVHIM-SKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDE 320 (596)
Q Consensus 242 ~~i~la~~~~~p~~i~hv~-s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~~~~~~~~Pplr~~~ 320 (596)
..+.+.|+. +.+....++.++.+ |. ++.+|.-.... +.++.
T Consensus 193 ----------~~v~igH~d~n~dd~~y~~~l~~~----Ga-----------~l~fD~iG~d~-------------y~pd~ 234 (316)
T COG1735 193 ----------RKVSIGHMDPNTDDVYYQKKLADR----GA-----------FLEFDRIGKDK-------------YYPDE 234 (316)
T ss_pred ----------hHeeEeccCCCCChHHHHHHHHhc----Cc-----------eEEecccCccc-------------cCcHH
Confidence 135567877 66777777777777 76 34444422211 11112
Q ss_pred CcHHHHHHHHhcCC--ccEEeCCCCCCChhhhhhCCCCCCcCCCCCcch----HHHHHHHHHhhccCCCCCHHHHHHHHh
Q psy10113 321 TTPTHLLTLLNENA--LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGV----QDRLSVIWEKGVVPGILSPEKFVAVTS 394 (596)
Q Consensus 321 ~~~~~l~~~l~~G~--~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~----e~~~~~~~~~~v~~~~l~~~e~v~~~T 394 (596)
.-...+..+++.|. .+.++-|.+.........+. . .-+|-.|. ...++.+- ..+++.+.+=.+.-
T Consensus 235 ~r~~~~~~l~~~gy~d~i~ls~d~~~~~~~~~~~~~---~-~~~~~~g~~~I~~~fIP~Lk-----~~Gvde~~i~~mlv 305 (316)
T COG1735 235 DRIAPLLELVARGYADLILLSHDDICLSDDVFLKSM---L-KANGGWGYGYILNDFIPRLK-----RHGVDEETIDTMLV 305 (316)
T ss_pred HhhhhHHHHHHhhHhhheecccchhhhhhhHHHHhh---h-hhcCCcccchhhHhhHHHHH-----HcCCCHHHHHHHHh
Confidence 22345666777774 45555344444333221100 0 00111111 12223332 34678777777888
Q ss_pred HhHHHHcCC
Q psy10113 395 TNAAKIFNL 403 (596)
Q Consensus 395 ~n~Ak~lgl 403 (596)
-|||++|..
T Consensus 306 dNP~r~f~~ 314 (316)
T COG1735 306 DNPARLFTA 314 (316)
T ss_pred hCHHHHhcc
Confidence 899999975
No 133
>PRK09358 adenosine deaminase; Provisional
Probab=97.38 E-value=0.012 Score=61.88 Aligned_cols=27 Identities=19% Similarity=0.265 Sum_probs=23.9
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 179 MLSDGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 179 ~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
..+.+.+.++++.|+++|+++.+|+.+
T Consensus 178 ~~~~~~~~~~~~~A~~~g~~~~~H~~E 204 (340)
T PRK09358 178 GFPPSKFARAFDRARDAGLRLTAHAGE 204 (340)
T ss_pred CCCHHHHHHHHHHHHHCCCCeEEcCCC
Confidence 357789999999999999999999864
No 134
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=97.25 E-value=0.0036 Score=64.52 Aligned_cols=263 Identities=18% Similarity=0.160 Sum_probs=131.8
Q ss_pred CccccccCCCccccC-----CCCcc----hHHH---HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeee
Q psy10113 72 GGIDPHTHFELELMG-----ATSVD----DFYH---GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDY 139 (596)
Q Consensus 72 G~ID~HtHl~~~~~~-----~~~~d----~~~~---g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 139 (596)
|+..+|=|+...+.. ....+ ++.. -.+.+-+.|..||+|+....-| .-.+.+++..+...-...+.-
T Consensus 7 G~tl~HEHl~~d~~~~~~~~~~~~~~~~~~~~~~~~El~~~k~~Gg~tiVd~T~~g~G-Rd~~~l~~is~~tGv~II~~T 85 (308)
T PF02126_consen 7 GFTLMHEHLLIDLSGFYKDPDEALDDRDEDVEAAVAELKEFKAAGGRTIVDATPIGLG-RDVEALREISRRTGVNIIAST 85 (308)
T ss_dssp SSEEEEEESEEETTTHHHHTGGGGCGHHHHHHHHHHHHHHHHHTTEEEEEE--SGGGT-B-HHHHHHHHHHHT-EEEEEE
T ss_pred CCeecccCeeecChhhccCCCcchhhhhhhHHHHHHHHHHHHHcCCCEEEecCCcccC-cCHHHHHHHHHHhCCeEEEeC
Confidence 778889998543321 01111 2222 2334456899999998655544 445667776666665667777
Q ss_pred ecccccc--CC-ChhHHHHHHHHH-HH--cCCC-------EEEEEeecCCCccCCHHH---HHHHHHHHHhcCCeEEEec
Q psy10113 140 ALHVGIT--WW-SDQVQQEMAELC-EK--HGVN-------SFKTFMAYKGLYMLSDGE---LYDAFSAIKNLGAIAMVHA 203 (596)
Q Consensus 140 ~~~~~~~--~~-~~~~~~e~~~lv-~~--~Gv~-------~~k~~~~~~~~~~~~~~~---l~~~~~~a~~~g~~~~vHa 203 (596)
|++.... .| .....+++.+++ ++ .|+. .+|...++ ..+++.| |+.+.+..++.|+++.+|.
T Consensus 86 G~y~~~~~p~~~~~~s~e~la~~~i~Ei~~GidgT~ikaG~Ik~~~~~---~~it~~E~k~lrAaa~A~~~TG~pI~~H~ 162 (308)
T PF02126_consen 86 GFYKEPFYPEWVREASVEELADLFIREIEEGIDGTGIKAGIIKEIGSS---NPITPLEEKVLRAAARAHKETGAPISTHT 162 (308)
T ss_dssp EE-SGGCSCHHHHTSHHHHHHHHHHHHHHT-STTSSB-ESEEEEEEBT---TBCEHHHHHHHHHHHHHHHHHT-EEEEEE
T ss_pred CCCccccCChhhhcCCHHHHHHHHHHHHHhcCCCCccchhheeEeecc---CCCCHHHHHHHHHHHHHHHHhCCeEEEcC
Confidence 7776422 11 111233444433 22 3543 45554443 2344433 5566666778899999998
Q ss_pred Cchh-hhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHhhcCCce
Q psy10113 204 ENGE-IIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHC 282 (596)
Q Consensus 204 e~~~-~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~~~G~~~ 282 (596)
+.+. .-.+..+.+.+.|+.. -.+.+.|+......+.+.++.+. |+
T Consensus 163 ~~g~~~~~e~~~il~e~Gv~~----------------------------~rvvigH~D~~~D~~y~~~la~~----G~-- 208 (308)
T PF02126_consen 163 GRGTRMGLEQLDILEEEGVDP----------------------------SRVVIGHMDRNPDLDYHRELADR----GV-- 208 (308)
T ss_dssp STTGTCHHHHHHHHHHTT--G----------------------------GGEEETSGGGST-HHHHHHHHHT----T---
T ss_pred CCCCcCHHHHHHHHHHcCCCh----------------------------hHeEEeCCCCCCCHHHHHHHHhc----CC--
Confidence 7654 2333333333333321 23567787766666666666666 77
Q ss_pred eeEEeeccceeecCCCCCCCc-cccccccccCCCCCCCCCcHHHHHHHHhcCC--ccEEeCCCCCCChhhhhhCCCCCCc
Q psy10113 283 TLYGETLAAAVGTHANQIPCT-WHDQAAHVLSPPLRPDETTPTHLLTLLNENA--LQTTGSDNCTFNKNQKELGKDSFTH 359 (596)
Q Consensus 283 ~v~~e~~~~~l~~~~~~~~~~-~~~~~~~~~~Pplr~~~~~~~~l~~~l~~G~--~~~~gsD~~~~~~~~~~~g~~~f~~ 359 (596)
++.+|.-..... +...... .+.+|....+.|..+++.|- .++++.|-+.....
T Consensus 209 ---------~l~~D~~g~~~~g~~~~~~~----~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~k~~~----------- 264 (308)
T PF02126_consen 209 ---------YLEFDTIGREFSGKDKNPRV----GYPPDEERIELLKELIEEGYADQILLSHDIGRKSRL----------- 264 (308)
T ss_dssp ---------EEEETTTT-B-TTTTTCHSC----TTS-HHHHHHHHHHHHHTTTGGGEEE-HHHESEEGS-----------
T ss_pred ---------EEEecCCcccccCcccCccC----CCCCHHHHHHHHHHHHHcCCcCcEEEeccccccccc-----------
Confidence 334443311000 0000000 01112233467888888884 67888886542111
Q ss_pred CCCCCcch------HHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHc
Q psy10113 360 IPNGVNGV------QDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIF 401 (596)
Q Consensus 360 ~p~G~~g~------e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~l 401 (596)
.+.|..|. +..++.+. ..+++.+++=++...||+++|
T Consensus 265 ~~~gg~g~~~~~i~~~fiP~L~-----~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 265 YRYGGGGYGYIYILTRFIPRLK-----ERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp SSCCHHHHTTTHHHHTHHHHHH-----HTTS-HHHHHHHHTHHHHHHH
T ss_pred cccCCCCccHHHHHHHHHHHHH-----HcCCCHHHHHHHHHHCHHHHc
Confidence 11222221 22223222 246899999999999999987
No 135
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=96.95 E-value=0.015 Score=58.42 Aligned_cols=185 Identities=16% Similarity=0.136 Sum_probs=102.2
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHH-HHHHHHHhcCCeEEEecC-chhhhHHHHHHHHHcCCCCCC
Q psy10113 148 WSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELY-DAFSAIKNLGAIAMVHAE-NGEIIDKNTQKLLAAGIKGPE 225 (596)
Q Consensus 148 ~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~-~~~~~a~~~g~~~~vHae-~~~~i~~~~~~l~~~Gi~~~~ 225 (596)
..++..+++++.+.+.|+.+++++....+.. ..+..+. .+++.|.++|+++.+|+. .... ..
T Consensus 82 ~~~~~~~~l~~~~~~~g~~Gv~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~pv~~H~g~~~~~-~~-------------- 145 (273)
T PF04909_consen 82 DPEDAVEELERALQELGFRGVKLHPDLGGFD-PDDPRLDDPIFEAAEELGLPVLIHTGMTGFP-DA-------------- 145 (273)
T ss_dssp SHHHHHHHHHHHHHTTTESEEEEESSETTCC-TTSGHCHHHHHHHHHHHT-EEEEEESHTHHH-HH--------------
T ss_pred CchhHHHHHHHhccccceeeeEecCCCCccc-cccHHHHHHHHHHHHhhccceeeeccccchh-hh--------------
Confidence 3556788899998888999999877554443 3444444 999999999999999965 1100 00
Q ss_pred cccCCChHHHHHHHHHHHHHHhcc-cCCCeEEEecCcH--HHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCC
Q psy10113 226 GHQLSRPEEVEAEAVTRACTIANQ-VDCPLYVVHIMSK--AAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPC 302 (596)
Q Consensus 226 ~~~~~~p~~~e~~a~~~~i~la~~-~~~p~~i~hv~s~--~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~ 302 (596)
............++.. -++++.+.|+... .-.+.+..+++. - .++.++...... +.
T Consensus 146 --------~~~~~~~~~~~~~~~~~P~l~ii~~H~G~~~~~~~~~~~l~~~~-----~--nvy~d~s~~~~~------~~ 204 (273)
T PF04909_consen 146 --------PSDPADPEELEELLERFPDLRIILAHLGGPFPWWEEALRLLDRF-----P--NVYVDLSGIPPF------WY 204 (273)
T ss_dssp --------HHHHHHHHHHTTHHHHSTTSEEEESGGGTTHHHHHHHHHHHHHH-----T--TEEEECHSHHSS------EE
T ss_pred --------hHHHHHHHHHHHHHHHhcCCeEEEecCcccchhHHHHHHHHHhC-----C--cccccccccccc------cc
Confidence 0001111122223333 4789999999887 444555554443 2 577766532110 00
Q ss_pred ccccccccccCCCCCCCCCcHHHHHHHHhc-C-CccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhcc
Q psy10113 303 TWHDQAAHVLSPPLRPDETTPTHLLTLLNE-N-ALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVV 380 (596)
Q Consensus 303 ~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~-G-~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~ 380 (596)
.|. + ......+..++.. | ..++.|||..-....... +... ... .
T Consensus 205 ~~~--------~-----~~~~~~l~~~~~~~g~drilfGSD~P~~~~~~~~----------------~~~~--~~~---~ 250 (273)
T PF04909_consen 205 FWP--------P-----SFDRPFLRRAVDEFGPDRILFGSDYPHPDGASPY----------------EYIW--EAY---F 250 (273)
T ss_dssp EET--------T-----HHCHHHHHHHHHHHTGGGEEEE--TTSSTHHHHH----------------HHHH--HHH---H
T ss_pred cCc--------c-----cccHHHHHHHHHHhCCceEEecCCCCCCCccccH----------------HHHH--Hhh---h
Confidence 000 0 0112334444433 3 588999997544332110 0000 010 0
Q ss_pred CCCCCHHHHHHHHhHhHHHHcCC
Q psy10113 381 PGILSPEKFVAVTSTNAAKIFNL 403 (596)
Q Consensus 381 ~~~l~~~e~v~~~T~n~Ak~lgl 403 (596)
...++.++.=++...||+++|+|
T Consensus 251 ~~~l~~~~~~~i~~~NA~rl~~l 273 (273)
T PF04909_consen 251 LDDLSEEEREKILYDNARRLYGL 273 (273)
T ss_dssp HHHSSHHHHHHHHTHHHHHHHTC
T ss_pred ccCCCHHHHHHHHhHhHHHHcCc
Confidence 01179999999999999999986
No 136
>PF07908 D-aminoacyl_C: D-aminoacylase, C-terminal region; InterPro: IPR012855 D-aminoacylase (Q9AGH8 from SWISSPROT, 3.5.1.81 from EC) hydrolyses a wide variety of N-acyl derivatives of neutral D-amino acids, in a zinc-dependent manner. The enzyme is composed of a small beta-barrel domain and a larger catalytic alpha/beta-barrel that contains a short alpha/beta insert. The overall structure shares significant similarity to the alpha/beta-barrel amidohydrolase superfamily, in which the beta-strands in both barrels superimpose well []. The C-terminal region featured in this entry forms part of the beta-barrel domain, together with a short N-terminal segment. This domain does not seem to contribute to the substrate-binding site or to be involved in the catalytic process.; GO: 0008270 zinc ion binding, 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; PDB: 3GIQ_B 3GIP_B 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A.
Probab=96.18 E-value=0.0047 Score=44.98 Aligned_cols=29 Identities=31% Similarity=0.612 Sum_probs=18.5
Q ss_pred EEEEEECCEEEEECCceeecCCCCeeecCC
Q psy10113 452 PEYVIVGGRVCVDEGNLRVAQGQGNYLPTH 481 (596)
Q Consensus 452 ~~~Vi~~GrvV~~dG~~~~~~g~g~~~~~~ 481 (596)
+.+||+||+++++||+++... .|++|+++
T Consensus 20 I~~V~VNG~~vv~~g~~t~~~-~G~~lrr~ 48 (48)
T PF07908_consen 20 IDYVFVNGQIVVEDGEVTGAR-PGRVLRRP 48 (48)
T ss_dssp EEEEEETTEEEECTTEESSS-----B----
T ss_pred EEEEEECCEEEEECCeECCCC-CCeEecCC
Confidence 489999999999999976544 89999864
No 137
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=96.14 E-value=0.42 Score=50.30 Aligned_cols=25 Identities=8% Similarity=-0.075 Sum_probs=21.9
Q ss_pred CHHHHHHHHHHHHhcC--CeEEEecCc
Q psy10113 181 SDGELYDAFSAIKNLG--AIAMVHAEN 205 (596)
Q Consensus 181 ~~~~l~~~~~~a~~~g--~~~~vHae~ 205 (596)
+...+..+|+.|++.| +++++||-+
T Consensus 177 ~~~~f~~~f~~ar~~g~~l~~t~HAGE 203 (345)
T cd01321 177 PLLDFLPQLLWFPKQCAEIPFFFHAGE 203 (345)
T ss_pred CHHHHHHHHHHHHHhCCCCceEeecCC
Confidence 5778889999999999 999999854
No 138
>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3.5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O ....
Probab=96.06 E-value=0.0087 Score=51.01 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=31.0
Q ss_pred cccEEEEccEEEcCCCceeeeEEEECCeEEEeccC
Q psy10113 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRN 52 (596)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~IedG~I~~Ig~~ 52 (596)
..+++|.|+.|+|....+++||.|+||+|+.||+.
T Consensus 65 ~lD~VItNa~IiD~~GI~KADIGIkdG~I~gIGkA 99 (121)
T PF00449_consen 65 ALDLVITNALIIDYTGIVKADIGIKDGRIVGIGKA 99 (121)
T ss_dssp C-SEEEEEEEEEETTEEEEEEEEEETTEEEEEE-E
T ss_pred cccEEEeCcEEEecCCcEEeeEEeeCCEEEEEecc
Confidence 46899999999999889999999999999999973
No 139
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=96.06 E-value=0.23 Score=49.17 Aligned_cols=70 Identities=14% Similarity=0.165 Sum_probs=45.3
Q ss_pred CcHHHHHHHHhcCCccEEeCCCCCCChhh-hhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHH
Q psy10113 321 TTPTHLLTLLNENALQTTGSDNCTFNKNQ-KELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAK 399 (596)
Q Consensus 321 ~~~~~l~~~l~~G~~~~~gsD~~~~~~~~-~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak 399 (596)
..+..+.+++..|....+-||.---.... ..++ | -.+..+... +.+.+.++.+.+-+.--.||++
T Consensus 213 asr~~v~~a~~~g~~FmmETDyIDDp~RpgavL~-------P---ktVPrr~~~----i~~~g~~~ee~vy~i~~E~pe~ 278 (285)
T COG1831 213 ASRKNVEDAAELGPRFMMETDYIDDPRRPGAVLG-------P---KTVPRRTRE----ILEKGDLTEEDVYRIHVENPER 278 (285)
T ss_pred ccHHHHHHHHhcCCceEeecccccCcccCCCcCC-------c---cchhHHHHH----HHHhcCCcHHHHHHHHHhCHHH
Confidence 34557778999999999999973211100 0111 1 112233333 3456778899999999999999
Q ss_pred HcCCC
Q psy10113 400 IFNLY 404 (596)
Q Consensus 400 ~lgl~ 404 (596)
++|++
T Consensus 279 VYg~~ 283 (285)
T COG1831 279 VYGIE 283 (285)
T ss_pred HhCcc
Confidence 99985
No 140
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=96.05 E-value=0.52 Score=47.60 Aligned_cols=50 Identities=20% Similarity=0.272 Sum_probs=38.5
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 153 QQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 153 ~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
.++++++ .+.|+.+++......+. .+++.+.++++.+.++|+++.+|+..
T Consensus 83 ~~~l~~~-~~~g~rGvRl~~~~~~~--~~~~~~~~~~~~~~~~gl~v~~~~~~ 132 (263)
T cd01311 83 DAELKEM-HDAGVRGVRFNFLFGGV--DNKDELDEIAKRAAELGWHVQVYFDA 132 (263)
T ss_pred HHHHHHH-HHCCCeEEEEecccCCC--CCHHHHHHHHHHHHHcCCEEEEEeCH
Confidence 4677777 55799999976443333 27788899999999999999999754
No 141
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=95.97 E-value=0.73 Score=47.37 Aligned_cols=176 Identities=22% Similarity=0.244 Sum_probs=104.1
Q ss_pred hhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccC
Q psy10113 150 DQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQL 229 (596)
Q Consensus 150 ~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~ 229 (596)
+...+|+++.+.+.|...+++.-...+.. .++..++.+++.|.++|+++.+|.-.+.... +.+. ..
T Consensus 112 ~~a~~E~er~v~~~gf~g~~l~p~~~~~~-~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~------------~~~~-~~ 177 (293)
T COG2159 112 EAAAEELERRVRELGFVGVKLHPVAQGFY-PDDPRLYPIYEAAEELGVPVVIHTGAGPGGA------------GLEK-GH 177 (293)
T ss_pred HHHHHHHHHHHHhcCceEEEecccccCCC-CCChHHHHHHHHHHHcCCCEEEEeCCCCCCc------------cccc-CC
Confidence 55778999999988999888754443433 4566689999999999999999975532110 0000 02
Q ss_pred CChHHHHHHHHHHHHHHhccc-CCCeEEEecC--cHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCCcccc
Q psy10113 230 SRPEEVEAEAVTRACTIANQV-DCPLYVVHIM--SKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHD 306 (596)
Q Consensus 230 ~~p~~~e~~a~~~~i~la~~~-~~p~~i~hv~--s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~~~~~ 306 (596)
+.|-.++. ++... +.++.+.|+. -.--.+.+..++. .. .|+.++....
T Consensus 178 ~~p~~~~~--------va~~fP~l~IVl~H~G~~~p~~~~a~~~a~~-----~~--nvy~d~s~~~-------------- 228 (293)
T COG2159 178 SDPLYLDD--------VARKFPELKIVLGHMGEDYPWELEAIELAYA-----HP--NVYLDTSGVR-------------- 228 (293)
T ss_pred CCchHHHH--------HHHHCCCCcEEEEecCCCCchhHHHHHHHHh-----CC--Cceeeeeccc--------------
Confidence 44444431 33344 8899999986 2222233333322 22 5655554111
Q ss_pred ccccccCCCCCCCCCcHHHHHHHHhc--CCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCC
Q psy10113 307 QAAHVLSPPLRPDETTPTHLLTLLNE--NALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGIL 384 (596)
Q Consensus 307 ~~~~~~~Pplr~~~~~~~~l~~~l~~--G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l 384 (596)
|... ...+++.+.. ...+..|||....... ..+ ..+....+
T Consensus 229 --------~~~~----~~~~~~~~~~~~~dkilFGSD~P~~~~~-~~l------------------------~~~~~l~l 271 (293)
T COG2159 229 --------PKYF----APPLLEFLKELGPDKILFGSDYPAIHPE-VWL------------------------AELDELGL 271 (293)
T ss_pred --------cccC----ChHHHHHHHhcccCeEEecCCCCCcCHH-HHH------------------------HHHHhcCC
Confidence 1100 1133343333 3589999995443332 211 12234567
Q ss_pred CHHHHHHHHhHhHHHHcCCCC
Q psy10113 385 SPEKFVAVTSTNAAKIFNLYP 405 (596)
Q Consensus 385 ~~~e~v~~~T~n~Ak~lgl~~ 405 (596)
+.+.--++.-.|++|+|++.+
T Consensus 272 ~~e~k~kiL~~NA~rll~l~~ 292 (293)
T COG2159 272 SEEVKEKILGENAARLLGLDP 292 (293)
T ss_pred CHHHHHHHHHHhHHHHhCcCC
Confidence 778888899999999999853
No 142
>PTZ00124 adenosine deaminase; Provisional
Probab=94.46 E-value=1.5 Score=46.43 Aligned_cols=53 Identities=11% Similarity=0.056 Sum_probs=35.8
Q ss_pred HHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHH
Q psy10113 326 LLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKI 400 (596)
Q Consensus 326 l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~ 400 (596)
+..+++.|+.++++||...+... .+..-|..+....+++..++.+++ .|+.++
T Consensus 294 i~~l~~~Gv~v~InTDDp~~~~t---------------------~l~~Ey~~~~~~~gls~~~l~~l~-~nai~a 346 (362)
T PTZ00124 294 IRKLYDAGVKVSVNSDDPGMFLT---------------------NINDDYEELYTHLNFTLADFMKMN-EWALEK 346 (362)
T ss_pred HHHHHHCCCcEEEeCCCccccCC---------------------ChhHHHHHHHHHcCCCHHHHHHHH-HHHHHH
Confidence 55799999999999999765432 122223334456789999988885 455443
No 143
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=94.03 E-value=2.9 Score=43.18 Aligned_cols=25 Identities=16% Similarity=0.308 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHhcC-CeEEEecCc
Q psy10113 181 SDGELYDAFSAIKNLG-AIAMVHAEN 205 (596)
Q Consensus 181 ~~~~l~~~~~~a~~~g-~~~~vHae~ 205 (596)
+...+...++.|++.| +.+.+|+-+
T Consensus 151 ~~~~f~~~~~~ar~~g~l~~t~HaGE 176 (305)
T cd00443 151 PLRDFYSYYEYARRLGLLGLTLHCGE 176 (305)
T ss_pred CHHHHHHHHHHHHHcCCcceEEeecC
Confidence 5678999999999999 999999854
No 144
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=92.04 E-value=1.2 Score=42.80 Aligned_cols=39 Identities=28% Similarity=0.371 Sum_probs=27.4
Q ss_pred ccccccCCCccc-cCCCCcchHHHHHHHHHhCCceEEecc
Q psy10113 73 GIDPHTHFELEL-MGATSVDDFYHGTKAAVAGGTTTIIDF 111 (596)
Q Consensus 73 ~ID~HtHl~~~~-~~~~~~d~~~~g~~~al~~GtTti~D~ 111 (596)
+||.|+|+--.. .|..+.++-....+.|.+.|+|+++..
T Consensus 1 MIDIH~HIlp~iDDGp~s~eesl~ml~~A~~qGvt~iVaT 40 (254)
T COG4464 1 MIDIHSHILPDIDDGPKSLEESLAMLREAVRQGVTKIVAT 40 (254)
T ss_pred CccccccccCCCCCCCCcHHHHHHHHHHHHHcCceEEeec
Confidence 589999983221 234455555566888999999999853
No 145
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=91.42 E-value=0.9 Score=47.44 Aligned_cols=54 Identities=26% Similarity=0.241 Sum_probs=32.7
Q ss_pred ChhHHHHHHHHHHHc---CCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 149 SDQVQQEMAELCEKH---GVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 149 ~~~~~~e~~~lv~~~---Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
.++..+++.++.... ++-+|.+.-... ......+..+++.+++.|+.+.+||-+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~vvG~dl~g~E~---~~~~~~~~~~~~~a~~~gl~~t~HaGE 202 (331)
T PF00962_consen 146 PDEWAEEIVELASKYPDKGVVGFDLAGDED---GGPPLKFAPAFRKAREAGLKLTVHAGE 202 (331)
T ss_dssp THHHHHHHHHHHHHTTTTTEEEEEEESSTT---STTGGGHHHHHHHHHHTT-EEEEEESS
T ss_pred hHHHHHHHHHHHhhcccceEEEEEecCCcc---cCchHHHHHHHhhhcccceeecceecc
Confidence 556666666665442 344443332211 223344889999999999999999854
No 146
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=89.05 E-value=28 Score=35.27 Aligned_cols=24 Identities=8% Similarity=0.068 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 182 DGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 182 ~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
.+.+++.++..+++|+.+.++...
T Consensus 123 a~~~r~~~~rL~~~gl~fdl~~~~ 146 (279)
T COG3618 123 APAWRANVERLAKLGLHFDLQVDP 146 (279)
T ss_pred hHHHHHHHHHHHhcCCeEEEEeCh
Confidence 367889999999999988877543
No 147
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=88.50 E-value=7.9 Score=40.56 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=23.4
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 179 MLSDGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 179 ~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
....+.+.++++.+++.|+.+.+||-+
T Consensus 181 ~~p~~~f~~~f~~~r~~gl~lt~HaGE 207 (345)
T COG1816 181 GYPPELFVSLFKLARDNGLKLTIHAGE 207 (345)
T ss_pred cCCHHHHHHHHHHHHHcCceEEEeccc
Confidence 356788999999999999999999853
No 148
>KOG1097|consensus
Probab=87.19 E-value=39 Score=35.92 Aligned_cols=25 Identities=12% Similarity=0.110 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 181 SDGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 181 ~~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
+...+..++..+.+.|+...+||-+
T Consensus 225 p~~~f~~vl~~~~~~gi~~t~HaGE 249 (399)
T KOG1097|consen 225 PLSLFLEVLAKAPAKGIHLTFHAGE 249 (399)
T ss_pred ChhhhHHHHHhhhhcCCcEEEEccc
Confidence 4456778888888899999999854
No 149
>PRK08392 hypothetical protein; Provisional
Probab=86.98 E-value=17 Score=35.32 Aligned_cols=35 Identities=26% Similarity=0.242 Sum_probs=24.5
Q ss_pred cccccCCCccccCCCCcchHHHHHHHHHhCCceEE--eccc
Q psy10113 74 IDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTI--IDFA 112 (596)
Q Consensus 74 ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti--~D~~ 112 (596)
||.|+|.... .+..+ +....+.|.+.|++.+ -||.
T Consensus 1 ~D~H~HT~~s-d~~~~---~~e~v~~A~~~Gl~~i~iTdH~ 37 (215)
T PRK08392 1 MDLHTHTVYS-DGIGS---VRDNIAEAERKGLRLVGISDHI 37 (215)
T ss_pred CccccCCCCc-CCcCC---HHHHHHHHHHcCCCEEEEccCC
Confidence 7999998664 34333 4455788999999987 3553
No 150
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=85.48 E-value=0.24 Score=53.12 Aligned_cols=28 Identities=18% Similarity=0.189 Sum_probs=17.2
Q ss_pred HHHHHHHhcccCCCeEEEecCcHHHHHHH
Q psy10113 240 VTRACTIANQVDCPLYVVHIMSKAAGDAM 268 (596)
Q Consensus 240 ~~~~i~la~~~~~p~~i~hv~s~~~~~~i 268 (596)
+.+.+..+.+.+.++.+ |.....+.+.+
T Consensus 227 l~~~v~~a~~~g~~v~v-Ha~gd~a~~~~ 254 (404)
T PF07969_consen 227 LEELVRAAREAGLQVAV-HAIGDRAIDEA 254 (404)
T ss_dssp HHHHHHHHHHCT-EEEE-EEESHHHHHHH
T ss_pred HHHHHHHHHhcCCeeEE-EEcCCchHHhH
Confidence 45677778888888887 44444444433
No 151
>PRK08609 hypothetical protein; Provisional
Probab=83.72 E-value=15 Score=41.41 Aligned_cols=32 Identities=25% Similarity=0.199 Sum_probs=23.3
Q ss_pred cccccCCCccccCCCCcchHHHHHHHHHhCCceEEe
Q psy10113 74 IDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTII 109 (596)
Q Consensus 74 ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~ 109 (596)
+|.|+|.... .+.. ++...+++|.+.|++.+.
T Consensus 336 ~DlH~HT~~s-Dg~~---sleemv~~A~~~Gl~~i~ 367 (570)
T PRK08609 336 GDLHMHTTWS-DGAF---SIEEMVEACIAKGYEYMA 367 (570)
T ss_pred CCccccCCCC-CCCC---CHHHHHHHHHHCCCCEEE
Confidence 4999998654 2333 355568889999999984
No 152
>PTZ00372 endonuclease 4-like protein; Provisional
Probab=81.98 E-value=40 Score=36.34 Aligned_cols=120 Identities=18% Similarity=0.130 Sum_probs=77.3
Q ss_pred ccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCC---ccCCHHHHHHHHHHHHh
Q psy10113 118 ESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGL---YMLSDGELYDAFSAIKN 194 (596)
Q Consensus 118 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~---~~~~~~~l~~~~~~a~~ 194 (596)
+.....+........ +.....|.|+.+.. .+...+++.. +.|.+.|.+|...... ..++++++.++.+.+++
T Consensus 113 ~~~~~~~~~~~~~~~-~~~~~iGaHvSiaG---G~~~a~~~a~-~~g~~afqiF~~npr~w~~~~~~~~~~~~f~~~~~~ 187 (413)
T PTZ00372 113 EDVDNAFNKIAELAE-KSNVYIGAHVSASG---GVDNSPINAY-NIAGQAFALFLKNQRTWNSPPLSDETIDKFKENCKK 187 (413)
T ss_pred hhhHHHHHHHHHHhh-ccCceEEEEEeccc---cHHHHHHHHH-HcCCCEEEEEcCCCccCCCCCCCHHHHHHHHHHHHH
Confidence 334445555554443 35557788876643 2333444443 4699999999865433 24688899999999999
Q ss_pred cCCe---EEEecCch-hhhHHHHHHHHHcCCCCCCcccCCChH--HHHHHHHHHHHHHhcccCCCeEEEecCc
Q psy10113 195 LGAI---AMVHAENG-EIIDKNTQKLLAAGIKGPEGHQLSRPE--EVEAEAVTRACTIANQVDCPLYVVHIMS 261 (596)
Q Consensus 195 ~g~~---~~vHae~~-~~i~~~~~~l~~~Gi~~~~~~~~~~p~--~~e~~a~~~~i~la~~~~~p~~i~hv~s 261 (596)
+|+. +.+|+... .+.. ..++ +...+.+.+.+..|.+.|++..++|..+
T Consensus 188 ~gi~~~~i~~HapYlINLAS-------------------pd~e~rekSv~~~~~eL~rA~~LGa~~VV~HPGs 241 (413)
T PTZ00372 188 YNYDPKFILPHGSYLINLAN-------------------PDKEKREKSYDAFLDDLQRCEQLGIKLYNFHPGS 241 (413)
T ss_pred cCCCcceEEeecCceecCCC-------------------CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 9763 78897531 0000 0111 1224677888999999999999999875
No 153
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism]
Probab=80.98 E-value=73 Score=33.02 Aligned_cols=169 Identities=13% Similarity=0.106 Sum_probs=102.0
Q ss_pred HHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeec
Q psy10113 95 HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAY 174 (596)
Q Consensus 95 ~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~ 174 (596)
...+++-+.|.-.++=. -+.....+++.+.++...-....|+.|.. .+...+.+.|+..+++-.+
T Consensus 40 ~QI~~L~~aG~dIVRvt---v~~~e~A~A~~~Ik~~~~vPLVaDiHf~~-----------rla~~~~~~g~~k~RINPG- 104 (361)
T COG0821 40 AQIKALERAGCDIVRVT---VPDMEAAEALKEIKQRLNVPLVADIHFDY-----------RLALEAAECGVDKVRINPG- 104 (361)
T ss_pred HHHHHHHHcCCCEEEEe---cCCHHHHHHHHHHHHhCCCCEEEEeeccH-----------HHHHHhhhcCcceEEECCc-
Confidence 34455667888887632 23345677888888877655555555421 1222233567776654322
Q ss_pred CCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCe
Q psy10113 175 KGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPL 254 (596)
Q Consensus 175 ~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~ 254 (596)
.. -..+.+.++.+.|++.|.++.+-...+.+-.+..+++ | ..+|+.+ .+...+-++++.+.+++-
T Consensus 105 --Ni-g~~~~v~~vVe~Ak~~g~piRIGVN~GSLek~~~~ky---~--------~pt~eal-veSAl~~a~~~e~l~f~~ 169 (361)
T COG0821 105 --NI-GFKDRVREVVEAAKDKGIPIRIGVNAGSLEKRLLEKY---G--------GPTPEAL-VESALEHAELLEELGFDD 169 (361)
T ss_pred --cc-CcHHHHHHHHHHHHHcCCCEEEecccCchhHHHHHHh---c--------CCCHHHH-HHHHHHHHHHHHHCCCCc
Confidence 11 2456799999999999999999988887655555544 2 1255555 355556677888888875
Q ss_pred EEEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCC
Q psy10113 255 YVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPC 302 (596)
Q Consensus 255 ~i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~ 302 (596)
.+..+-.......++..+.. .+.. -+|.||++++.....
T Consensus 170 i~iS~K~Sdv~~~v~aYr~l--A~~~-------dyPLHLGvTEAG~~~ 208 (361)
T COG0821 170 IKVSVKASDVQLMVAAYRLL--AKRC-------DYPLHLGVTEAGMGF 208 (361)
T ss_pred EEEEEEcCCHHHHHHHHHHH--HHhc-------CCCcccceecccCcc
Confidence 55555554555555544432 0011 147777777765443
No 154
>PRK01060 endonuclease IV; Provisional
Probab=78.31 E-value=21 Score=36.12 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=60.9
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCCc---cCCHHHHHHHHHHHHhcCCe---EEEecCch-hhhHHHHHHHHHcCCCCCC
Q psy10113 153 QQEMAELCEKHGVNSFKTFMAYKGLY---MLSDGELYDAFSAIKNLGAI---AMVHAENG-EIIDKNTQKLLAAGIKGPE 225 (596)
Q Consensus 153 ~~e~~~lv~~~Gv~~~k~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~---~~vHae~~-~~i~~~~~~l~~~Gi~~~~ 225 (596)
.+++-+.+++.|.+++.+++.....+ ..+++++.++.+.++++|+. +.+|+... .+..
T Consensus 14 ~~~~l~~~~~~G~d~vEl~~~~p~~~~~~~~~~~~~~~lk~~~~~~gl~~~~~~~h~~~~~nl~~--------------- 78 (281)
T PRK01060 14 LEGAVAEAAEIGANAFMIFTGNPQQWKRKPLEELNIEAFKAACEKYGISPEDILVHAPYLINLGN--------------- 78 (281)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCCCCceEEecceEecCCC---------------
Confidence 44455556678999999987533222 46788899999999999998 78886421 0000
Q ss_pred cccCCCh--HHHHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 226 GHQLSRP--EEVEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 226 ~~~~~~p--~~~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
..+ .+...+.+.+++.+|.+.+++..++|..
T Consensus 79 ----~d~~~r~~s~~~~~~~i~~A~~lga~~vv~h~G 111 (281)
T PRK01060 79 ----PNKEILEKSRDFLIQEIERCAALGAKLLVFHPG 111 (281)
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 011 1122467888999999999998888865
No 155
>smart00518 AP2Ec AP endonuclease family 2. These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites
Probab=76.50 E-value=70 Score=32.05 Aligned_cols=86 Identities=20% Similarity=0.175 Sum_probs=59.3
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCc---cCCHHHHHHHHHHHHhcCCeEEEecCch-hhhHHHHHHHHHcCCCCCCcccCC
Q psy10113 155 EMAELCEKHGVNSFKTFMAYKGLY---MLSDGELYDAFSAIKNLGAIAMVHAENG-EIIDKNTQKLLAAGIKGPEGHQLS 230 (596)
Q Consensus 155 e~~~lv~~~Gv~~~k~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~~~vHae~~-~~i~~~~~~l~~~Gi~~~~~~~~~ 230 (596)
.++.+. +.|...+.+++.....+ .++++.+.++.+.++++|+.+.+|+... .+. . .
T Consensus 15 ~~~~~~-~~G~~~vel~~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~ls~h~p~~~nl~-------------s------~ 74 (273)
T smart00518 15 AFIEAV-DIGARSFQLFLGNPRSWKGVRLSEETAEKFKEALKENNIDVSVHAPYLINLA-------------S------P 74 (273)
T ss_pred HHHHHH-HcCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCceecCC-------------C------C
Confidence 444443 46999999887654332 3678889999999999999999996421 000 0 0
Q ss_pred ChH--HHHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 231 RPE--EVEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 231 ~p~--~~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
.++ +...+.+.+++.+|+..|++..++|..
T Consensus 75 d~~~r~~~~~~l~~~i~~A~~lGa~~vv~h~g 106 (273)
T smart00518 75 DKEKVEKSIERLIDEIKRCEELGIKALVFHPG 106 (273)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 111 122466888999999999998888874
No 156
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=74.85 E-value=75 Score=33.87 Aligned_cols=165 Identities=19% Similarity=0.162 Sum_probs=94.8
Q ss_pred CCCcchHHHHHHHHHhCCceEEeccccCCC--------CccHHHHHHHHHHHhccCceeee----eccccccCCChhHHH
Q psy10113 87 ATSVDDFYHGTKAAVAGGTTTIIDFALPRK--------GESLIKTYESWRQKADEKVCCDY----ALHVGITWWSDQVQQ 154 (596)
Q Consensus 87 ~~~~d~~~~g~~~al~~GtTti~D~~~~~~--------~~~~~~a~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 154 (596)
++..+|+.-.+..+=+-|+.++- +..+.. +++..+.++..++.... -.... --.++...+.+++.+
T Consensus 24 Rmrt~DmlPi~e~lD~~G~~slE-~WGGATFDaciRfLnEDPWeRLr~lk~~~~n-T~LQMLlRGQNlvGYrhyaDDvVe 101 (472)
T COG5016 24 RMRTEDMLPIAEALDKVGYWSLE-VWGGATFDACIRFLNEDPWERLRELKKAVPN-TKLQMLLRGQNLVGYRHYADDVVE 101 (472)
T ss_pred HHhHHhhHHHHHHHHhcCeeEEE-ecCCccHHHHHHHhcCCHHHHHHHHHHhCCC-cHHHHHHccCccccccCCchHHHH
Confidence 44556776666667778888873 211111 12333334444333221 11111 112355677888888
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEec-------CchhhhHHHHHHHHHcCCCCCCc-
Q psy10113 155 EMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHA-------ENGEIIDKNTQKLLAAGIKGPEG- 226 (596)
Q Consensus 155 e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHa-------e~~~~i~~~~~~l~~~Gi~~~~~- 226 (596)
...+...++|++-|++|-+. -+..-|...++.++++|+.++.-. .+-+.-.+..+++++.|++...-
T Consensus 102 ~Fv~ka~~nGidvfRiFDAl-----ND~RNl~~ai~a~kk~G~h~q~~i~YT~sPvHt~e~yv~~akel~~~g~DSIciK 176 (472)
T COG5016 102 KFVEKAAENGIDVFRIFDAL-----NDVRNLKTAIKAAKKHGAHVQGTISYTTSPVHTLEYYVELAKELLEMGVDSICIK 176 (472)
T ss_pred HHHHHHHhcCCcEEEechhc-----cchhHHHHHHHHHHhcCceeEEEEEeccCCcccHHHHHHHHHHHHHcCCCEEEee
Confidence 77777777899999999763 244568889999999999666431 23333345678899999876431
Q ss_pred --ccCCChHHHHHHHHHHHHHHhcccCCCeEEE-ecCcH
Q psy10113 227 --HQLSRPEEVEAEAVTRACTIANQVDCPLYVV-HIMSK 262 (596)
Q Consensus 227 --~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~-hv~s~ 262 (596)
.-...|...- + -.-.+-+..+.|++++ |..+.
T Consensus 177 DmaGlltP~~ay-e---lVk~iK~~~~~pv~lHtH~TsG 211 (472)
T COG5016 177 DMAGLLTPYEAY-E---LVKAIKKELPVPVELHTHATSG 211 (472)
T ss_pred cccccCChHHHH-H---HHHHHHHhcCCeeEEecccccc
Confidence 1233454332 2 2233445667887752 44443
No 157
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=72.88 E-value=94 Score=30.07 Aligned_cols=77 Identities=16% Similarity=0.092 Sum_probs=50.3
Q ss_pred cHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCe
Q psy10113 119 SLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAI 198 (596)
Q Consensus 119 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 198 (596)
...++|+...+|.+. .....-+....+...+..+++..++-.+.|...+++.- -++.++...+..- ..-.
T Consensus 15 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~l~~~yg~~gv~i~~-------~np~~l~~~V~k~--~~~v 84 (216)
T PRK03892 15 RSEEAYELAKEWFDE-VVFTKKLVLEDSPDFGSLKEELKELKKEYGKVAILLVT-------PKPSLIREVKQRF--LNYL 84 (216)
T ss_pred ccHHHHHHHHHHhhh-eEEEEEEeccCCCChhhhHHHHHHHHHhcCcceEEEec-------CCHHHHHHHHHhc--cceE
Confidence 346788888888875 33334443333333345677888888888988776543 3667787777666 4667
Q ss_pred EEEecCc
Q psy10113 199 AMVHAEN 205 (596)
Q Consensus 199 ~~vHae~ 205 (596)
+.||.-+
T Consensus 85 v~V~GGd 91 (216)
T PRK03892 85 IYVQGGD 91 (216)
T ss_pred EEEECCc
Confidence 7777655
No 158
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=71.50 E-value=1.1e+02 Score=34.74 Aligned_cols=128 Identities=12% Similarity=0.062 Sum_probs=77.3
Q ss_pred HHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEe
Q psy10113 93 FYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFM 172 (596)
Q Consensus 93 ~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~ 172 (596)
++.-.+.|.+.|+..++=|-.-..-..+..+++..++... ...+...+ ...+..+.+...++.+.+.+.|+..+-+--
T Consensus 98 v~~~v~~a~~~Gidv~Rifd~lnd~~n~~~~i~~~k~~G~-~~~~~i~y-t~sp~~t~e~~~~~ak~l~~~Gad~I~IkD 175 (596)
T PRK14042 98 VRAFVKLAVNNGVDVFRVFDALNDARNLKVAIDAIKSHKK-HAQGAICY-TTSPVHTLDNFLELGKKLAEMGCDSIAIKD 175 (596)
T ss_pred HHHHHHHHHHcCCCEEEEcccCcchHHHHHHHHHHHHcCC-EEEEEEEe-cCCCCCCHHHHHHHHHHHHHcCCCEEEeCC
Confidence 4456788999999998744333333344455555555432 12222111 123455666666666666677998764321
Q ss_pred ecCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchhhhH-HHHHHHHHcCCCCCC
Q psy10113 173 AYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGEIID-KNTQKLLAAGIKGPE 225 (596)
Q Consensus 173 ~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~~i~-~~~~~l~~~Gi~~~~ 225 (596)
..-.+++.+++++++..++ .++++.+|+.+..-.. ...-..++.|++...
T Consensus 176 ---taG~l~P~~v~~lv~alk~~~~ipi~~H~Hnt~Gla~an~laAieaGad~iD 227 (596)
T PRK14042 176 ---MAGLLTPTVTVELYAGLKQATGLPVHLHSHSTSGLASICHYEAVLAGCNHID 227 (596)
T ss_pred ---cccCCCHHHHHHHHHHHHhhcCCEEEEEeCCCCCcHHHHHHHHHHhCCCEEE
Confidence 2235789999999988875 5899999987654332 334556788865543
No 159
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=70.33 E-value=1.3e+02 Score=33.47 Aligned_cols=128 Identities=13% Similarity=0.048 Sum_probs=73.9
Q ss_pred HHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEe
Q psy10113 93 FYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFM 172 (596)
Q Consensus 93 ~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~ 172 (596)
...-.+.+++.|+..++=|...+.-..+..+++..++... ......++.. .+..+.+..-++.+.+.+.|+..+-+--
T Consensus 99 v~~fv~~a~~~Gidi~RIfd~lndv~nl~~ai~~vk~ag~-~~~~~i~yt~-sp~~t~e~~~~~a~~l~~~Gad~I~IkD 176 (499)
T PRK12330 99 VDRFVEKSAENGMDVFRVFDALNDPRNLEHAMKAVKKVGK-HAQGTICYTV-SPIHTVEGFVEQAKRLLDMGADSICIKD 176 (499)
T ss_pred HHHHHHHHHHcCCCEEEEEecCChHHHHHHHHHHHHHhCC-eEEEEEEEec-CCCCCHHHHHHHHHHHHHcCCCEEEeCC
Confidence 4455778899999998643222222233344444444332 1211222211 2234555555655555567998764321
Q ss_pred ecCCCccCCHHHHHHHHHHHHhc---CCeEEEecCchhh-hHHHHHHHHHcCCCCCC
Q psy10113 173 AYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAENGEI-IDKNTQKLLAAGIKGPE 225 (596)
Q Consensus 173 ~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~~~~-i~~~~~~l~~~Gi~~~~ 225 (596)
..-.+++.+++++++..++. ++++.+|+.+..- .....-..++.|++...
T Consensus 177 ---taGll~P~~~~~LV~~Lk~~~~~~ipI~~H~Hnt~GlA~An~laAieAGad~vD 230 (499)
T PRK12330 177 ---MAALLKPQPAYDIVKGIKEACGEDTRINLHCHSTTGVTLVSLMKAIEAGVDVVD 230 (499)
T ss_pred ---CccCCCHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCcHHHHHHHHHHcCCCEEE
Confidence 22357899999999998865 5899999877532 23345556788876544
No 160
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=69.93 E-value=1.1e+02 Score=33.54 Aligned_cols=126 Identities=14% Similarity=0.051 Sum_probs=71.6
Q ss_pred HHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEee
Q psy10113 94 YHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMA 173 (596)
Q Consensus 94 ~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~ 173 (596)
..-.+.|++.|+..+.=+...+....+.++++..++... ...+..+... .+..+.+...++.+.+.+.|++.+.+--
T Consensus 99 ~~~v~~A~~~Gvd~irif~~lnd~~n~~~~v~~ak~~G~-~v~~~i~~t~-~p~~~~~~~~~~a~~l~~~Gad~I~i~D- 175 (448)
T PRK12331 99 ESFVQKSVENGIDIIRIFDALNDVRNLETAVKATKKAGG-HAQVAISYTT-SPVHTIDYFVKLAKEMQEMGADSICIKD- 175 (448)
T ss_pred HHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCC-eEEEEEEeec-CCCCCHHHHHHHHHHHHHcCCCEEEEcC-
Confidence 344677899999988644322222234444444433321 1111112211 2345555555555555567998764331
Q ss_pred cCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchhhh-HHHHHHHHHcCCCCC
Q psy10113 174 YKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGEII-DKNTQKLLAAGIKGP 224 (596)
Q Consensus 174 ~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~~i-~~~~~~l~~~Gi~~~ 224 (596)
..-.+++.+++++++..++ .++++.+|+.|..-. ....-..++.|++..
T Consensus 176 --t~G~l~P~~v~~lv~alk~~~~~pi~~H~Hnt~GlA~AN~laAieaGad~v 226 (448)
T PRK12331 176 --MAGILTPYVAYELVKRIKEAVTVPLEVHTHATSGIAEMTYLKAIEAGADII 226 (448)
T ss_pred --CCCCCCHHHHHHHHHHHHHhcCCeEEEEecCCCCcHHHHHHHHHHcCCCEE
Confidence 2235788999999988875 589999998775422 234455678887653
No 161
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=69.51 E-value=1.3e+02 Score=33.16 Aligned_cols=130 Identities=11% Similarity=0.041 Sum_probs=74.5
Q ss_pred cch-HHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc-cccCCChhHHHHHHHHHHHcCCCE
Q psy10113 90 VDD-FYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV-GITWWSDQVQQEMAELCEKHGVNS 167 (596)
Q Consensus 90 ~d~-~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~lv~~~Gv~~ 167 (596)
+|+ +....+.|.+.|+..++-+-....-..+..+++..++... .+...+.. ..+..+.+...++.+.+.+.|++.
T Consensus 103 pddvv~~fv~~a~~~Gidi~Rifd~lnd~~n~~~ai~~ak~~G~---~~~~~i~yt~sp~~t~~y~~~~a~~l~~~Gad~ 179 (468)
T PRK12581 103 ADDIVDKFISLSAQNGIDVFRIFDALNDPRNIQQALRAVKKTGK---EAQLCIAYTTSPVHTLNYYLSLVKELVEMGADS 179 (468)
T ss_pred cchHHHHHHHHHHHCCCCEEEEcccCCCHHHHHHHHHHHHHcCC---EEEEEEEEEeCCcCcHHHHHHHHHHHHHcCCCE
Confidence 344 3445778899999999744333333344455555444332 11112111 123334444445554445679987
Q ss_pred EEEEeecCCCccCCHHHHHHHHHHHHhc-CCeEEEecCchhh-hHHHHHHHHHcCCCCCC
Q psy10113 168 FKTFMAYKGLYMLSDGELYDAFSAIKNL-GAIAMVHAENGEI-IDKNTQKLLAAGIKGPE 225 (596)
Q Consensus 168 ~k~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~~~vHae~~~~-i~~~~~~l~~~Gi~~~~ 225 (596)
+-+.- ..-.+++.+++++++..++. ++++.+|+.+..- .....-..++.|++...
T Consensus 180 I~IkD---taG~l~P~~v~~Lv~alk~~~~~pi~~H~Hnt~GlA~An~laAieAGad~vD 236 (468)
T PRK12581 180 ICIKD---MAGILTPKAAKELVSGIKAMTNLPLIVHTHATSGISQMTYLAAVEAGADRID 236 (468)
T ss_pred EEECC---CCCCcCHHHHHHHHHHHHhccCCeEEEEeCCCCccHHHHHHHHHHcCCCEEE
Confidence 64332 22357899999999888864 6889999876542 22344556788876543
No 162
>cd07937 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain. This family includes the carboxyltransferase domains of pyruvate carboxylase (PC) and the transcarboxylase (TC) 5S subunit. Transcarboxylase 5S is a cobalt-dependent metalloenzyme subunit of the biotin-dependent transcarboxylase multienzyme complex. Transcarboxylase 5S transfers carbon dioxide from the 1.3S biotin to pyruvate in the second of two carboxylation reactions catalyzed by TC. The first reaction involves the transfer of carbon dioxide from methylmalonyl-CoA to the 1.3S biotin, and is catalyzed by the 12S subunit. These two steps allow a carboxylate group to be transferred from oxaloacetate to propionyl-CoA to yield pyruvate and methylmalonyl-CoA. The catalytic domain of transcarboxylase 5S has a canonical TIM-barrel fold with a large C-terminal extension that forms a funnel leading to the active site. Transcarboxylase 5S forms a homodimer and there are six dimers per complex
Probab=68.78 E-value=1.1e+02 Score=31.05 Aligned_cols=173 Identities=11% Similarity=0.014 Sum_probs=0.0
Q ss_pred HHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCC
Q psy10113 97 TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKG 176 (596)
Q Consensus 97 ~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~ 176 (596)
.+.+...|+..|+=+.....-..+.+.++..++.. .......++... +.++++...++.+.+.+.|+..+.+.- .
T Consensus 97 i~~~~~~g~~~iri~~~~~~~~~~~~~i~~ak~~G-~~v~~~i~~~~~-~~~~~~~~~~~~~~~~~~Ga~~i~l~D---T 171 (275)
T cd07937 97 VEKAAKNGIDIFRIFDALNDVRNLEVAIKAVKKAG-KHVEGAICYTGS-PVHTLEYYVKLAKELEDMGADSICIKD---M 171 (275)
T ss_pred HHHHHHcCCCEEEEeecCChHHHHHHHHHHHHHCC-CeEEEEEEecCC-CCCCHHHHHHHHHHHHHcCCCEEEEcC---C
Q ss_pred CccCCHHHHHHHHHHHHhc-CCeEEEecCch-hhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCe
Q psy10113 177 LYMLSDGELYDAFSAIKNL-GAIAMVHAENG-EIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPL 254 (596)
Q Consensus 177 ~~~~~~~~l~~~~~~a~~~-g~~~~vHae~~-~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~ 254 (596)
.-.++++++.++++..++. +.++.+|+.|. ..........++.|+...+.-...--+..---++...+...+..+...
T Consensus 172 ~G~~~P~~v~~lv~~l~~~~~~~l~~H~Hnd~GlA~aN~laA~~aGa~~vd~sv~GlG~~aGN~~~E~l~~~L~~~g~~~ 251 (275)
T cd07937 172 AGLLTPYAAYELVKALKKEVGLPIHLHTHDTSGLAVATYLAAAEAGVDIVDTAISPLSGGTSQPSTESMVAALRGTGRDT 251 (275)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCeEEEEecCCCChHHHHHHHHHHhCCCEEEEecccccCCcCChhHHHHHHHHHccCCCC
Q ss_pred EEEecCcHHHHHHHHHHHHH
Q psy10113 255 YVVHIMSKAAGDAMAYKRKE 274 (596)
Q Consensus 255 ~i~hv~s~~~~~~i~~a~~~ 274 (596)
.+-.-.-....+.+...+++
T Consensus 252 ~~dl~~l~~~~~~v~~~~~~ 271 (275)
T cd07937 252 GLDLEKLEEISEYFEEVRKK 271 (275)
T ss_pred CCCHHHHHHHHHHHHHHHHH
No 163
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=67.41 E-value=1.7e+02 Score=31.30 Aligned_cols=135 Identities=19% Similarity=0.195 Sum_probs=77.1
Q ss_pred HHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhc-cCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEE
Q psy10113 93 FYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKAD-EKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTF 171 (596)
Q Consensus 93 ~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~ 171 (596)
+....+.+...|++.++-|-.-+....+..+++..++... ..+..-|... +-.+-+..-++.+-+.+.|++|+-+-
T Consensus 100 Ve~Fv~ka~~nGidvfRiFDAlND~RNl~~ai~a~kk~G~h~q~~i~YT~s---PvHt~e~yv~~akel~~~g~DSIciK 176 (472)
T COG5016 100 VEKFVEKAAENGIDVFRIFDALNDVRNLKTAIKAAKKHGAHVQGTISYTTS---PVHTLEYYVELAKELLEMGVDSICIK 176 (472)
T ss_pred HHHHHHHHHhcCCcEEEechhccchhHHHHHHHHHHhcCceeEEEEEeccC---CcccHHHHHHHHHHHHHcCCCEEEee
Confidence 4556888999999999754322222345555555554432 1122222221 12222333334433345699876432
Q ss_pred eecCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchh-hhHHHHHHHHHcCCCCCC------cccCCChH
Q psy10113 172 MAYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGE-IIDKNTQKLLAAGIKGPE------GHQLSRPE 233 (596)
Q Consensus 172 ~~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~-~i~~~~~~l~~~Gi~~~~------~~~~~~p~ 233 (596)
+..| .+++...+++++.+++ +++++.+|+.... ......-+..+.|++... ..-.|+|.
T Consensus 177 -DmaG--lltP~~ayelVk~iK~~~~~pv~lHtH~TsG~a~m~ylkAvEAGvD~iDTAisp~S~gtsqP~ 243 (472)
T COG5016 177 -DMAG--LLTPYEAYELVKAIKKELPVPVELHTHATSGMAEMTYLKAVEAGVDGIDTAISPLSGGTSQPA 243 (472)
T ss_pred -cccc--cCChHHHHHHHHHHHHhcCCeeEEecccccchHHHHHHHHHHhCcchhhhhhccccCCCCCCc
Confidence 2122 4688999999998885 6899999975433 333445667788887643 34455665
No 164
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=66.38 E-value=98 Score=31.64 Aligned_cols=120 Identities=18% Similarity=0.166 Sum_probs=63.0
Q ss_pred HHHHHHHhCCceEEe-ccccCCCCccHHHHHH---HHHHHhccC-cee--eeeccccccC----CC-h---hHHHHHHHH
Q psy10113 95 HGTKAAVAGGTTTII-DFALPRKGESLIKTYE---SWRQKADEK-VCC--DYALHVGITW----WS-D---QVQQEMAEL 159 (596)
Q Consensus 95 ~g~~~al~~GtTti~-D~~~~~~~~~~~~a~~---~~~~~~~~~-~~~--~~~~~~~~~~----~~-~---~~~~e~~~l 159 (596)
..++.|++.|+|+|. |. +..++.+.++ +..+.+... ..+ ..|--.+... .. + ...++..++
T Consensus 88 e~i~~Ai~~GftSVM~Dg----S~l~~eeNi~~T~~vv~~Ah~~gv~VEaElG~vgg~e~~~~~~~~~~~~T~peea~~F 163 (284)
T PRK09195 88 DDIAQKVRSGVRSVMIDG----SHLPFAQNISLVKEVVDFCHRFDVSVEAELGRLGGQEDDLQVDEADALYTDPAQAREF 163 (284)
T ss_pred HHHHHHHHcCCCEEEeCC----CCCCHHHHHHHHHHHHHHHHHcCCEEEEEEecccCcccCcccccccccCCCHHHHHHH
Confidence 447889999999994 32 2234444433 333333322 111 1111111110 00 0 135677788
Q ss_pred HHHcCCCEEEEEee-----cCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCC
Q psy10113 160 CEKHGVNSFKTFMA-----YKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIK 222 (596)
Q Consensus 160 v~~~Gv~~~k~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~ 222 (596)
+++-|++.+-+..+ |++.+.++.+.|.++-+ ..+.++..|--.+-. .+..+++.+.|+.
T Consensus 164 v~~TgvD~LAvaiGt~HG~y~~~p~Ld~~~L~~I~~---~~~vPLVLHGgSG~~-~e~~~~ai~~Gi~ 227 (284)
T PRK09195 164 VEATGIDSLAVAIGTAHGMYKGEPKLDFDRLENIRQ---WVNIPLVLHGASGLP-TKDIQQTIKLGIC 227 (284)
T ss_pred HHHHCcCEEeeccCccccccCCCCcCCHHHHHHHHH---HhCCCeEEecCCCCC-HHHHHHHHHcCCe
Confidence 87779998876553 33334566666666644 458999999554321 3334445555543
No 165
>PRK07328 histidinol-phosphatase; Provisional
Probab=66.10 E-value=1.5e+02 Score=29.78 Aligned_cols=34 Identities=24% Similarity=0.043 Sum_probs=24.5
Q ss_pred ccccccCCCccccCCCCcchHHHHHHHHHhCCceEEe
Q psy10113 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTII 109 (596)
Q Consensus 73 ~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~ 109 (596)
.+|.|+|......+..+ +....++|.+.|.+++.
T Consensus 3 ~~D~H~HT~~s~~~~~~---~ee~v~~A~~~Gl~~i~ 36 (269)
T PRK07328 3 LVDYHMHTPLCGHAVGT---PEEYVQAARRAGLKEIG 36 (269)
T ss_pred ceeeccCCCCCCCCCCC---HHHHHHHHHHCCCCEEE
Confidence 47999998665444333 55558889999999973
No 166
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=65.88 E-value=2.4e+02 Score=32.07 Aligned_cols=161 Identities=19% Similarity=0.135 Sum_probs=101.9
Q ss_pred CCCCcchHHHHHHHHHhCCceEEe-------ccccCCCCccHHHHHHHHHHHhccCceeeeec----cccccCCChhHHH
Q psy10113 86 GATSVDDFYHGTKAAVAGGTTTII-------DFALPRKGESLIKTYESWRQKADEKVCCDYAL----HVGITWWSDQVQQ 154 (596)
Q Consensus 86 ~~~~~d~~~~g~~~al~~GtTti~-------D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 154 (596)
..+..+++...+..+-+.|+.++- |....-..++..+.++.+++... +...-..+ .++.....+++.+
T Consensus 21 tr~~t~d~~~ia~~~d~~g~~siE~~gGatfd~~~rfl~edpwerl~~~r~~~p-nt~lqmL~Rg~N~vGy~~~~d~vv~ 99 (596)
T PRK14042 21 TRMRTEDMLPICNKMDDVGFWAMEVWGGATFDACLRFLKEDPWSRLRQLRQALP-NTQLSMLLRGQNLLGYRNYADDVVR 99 (596)
T ss_pred cCCCHHHHHHHHHHHHhcCCCEEEeeCCcccceeecccCCCHHHHHHHHHHhCC-CCceEEEeccccccccccCChHHHH
Confidence 345667777766666666666652 22223334566677777777653 34443333 4566777888888
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEe-------cCchhhhHHHHHHHHHcCCCCCC--
Q psy10113 155 EMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVH-------AENGEIIDKNTQKLLAAGIKGPE-- 225 (596)
Q Consensus 155 e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vH-------ae~~~~i~~~~~~l~~~Gi~~~~-- 225 (596)
..-+...++|++.|++|-+. -..+.+...++.+++.|..+..- ..+.+...+..+.+.+.|+....
T Consensus 100 ~~v~~a~~~Gidv~Rifd~l-----nd~~n~~~~i~~~k~~G~~~~~~i~yt~sp~~t~e~~~~~ak~l~~~Gad~I~Ik 174 (596)
T PRK14042 100 AFVKLAVNNGVDVFRVFDAL-----NDARNLKVAIDAIKSHKKHAQGAICYTTSPVHTLDNFLELGKKLAEMGCDSIAIK 174 (596)
T ss_pred HHHHHHHHcCCCEEEEcccC-----cchHHHHHHHHHHHHcCCEEEEEEEecCCCCCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 77777777899999998652 24556888999999999876653 24455566677888888875422
Q ss_pred -cccCCChHHHHHHHHHHHHHHhcccCCCeEE
Q psy10113 226 -GHQLSRPEEVEAEAVTRACTIANQVDCPLYV 256 (596)
Q Consensus 226 -~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i 256 (596)
---+..|..+. + +.+++. +..+.|+++
T Consensus 175 DtaG~l~P~~v~-~-lv~alk--~~~~ipi~~ 202 (596)
T PRK14042 175 DMAGLLTPTVTV-E-LYAGLK--QATGLPVHL 202 (596)
T ss_pred CcccCCCHHHHH-H-HHHHHH--hhcCCEEEE
Confidence 22345566553 2 222322 335678776
No 167
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=65.08 E-value=1.1e+02 Score=31.32 Aligned_cols=118 Identities=15% Similarity=0.178 Sum_probs=60.3
Q ss_pred HHHHHHhCCceEEe-ccccCCCCccHHHHHH---HHHHHhcc-Cceee--eeccccccC----CC-h---hHHHHHHHHH
Q psy10113 96 GTKAAVAGGTTTII-DFALPRKGESLIKTYE---SWRQKADE-KVCCD--YALHVGITW----WS-D---QVQQEMAELC 160 (596)
Q Consensus 96 g~~~al~~GtTti~-D~~~~~~~~~~~~a~~---~~~~~~~~-~~~~~--~~~~~~~~~----~~-~---~~~~e~~~lv 160 (596)
..+.|++.|+|+|. |. +..++.+.++ +..+.+.. +..+. .|--.+... .. + ...++..+++
T Consensus 89 ~i~~ai~~GFtSVM~Dg----S~lp~eeNi~~T~evv~~Ah~~gv~VEaElG~igg~ed~~~~~~~~~~~T~peea~~Fv 164 (286)
T PRK12738 89 DIRRKVHAGVRSAMIDG----SHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFV 164 (286)
T ss_pred HHHHHHHcCCCeEeecC----CCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEeeCCccCCcccccchhcCCCHHHHHHHH
Confidence 47778999999994 32 2223444433 33334432 12211 111111111 11 0 1356777788
Q ss_pred HHcCCCEEEEEee-cCCCc----cCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCC
Q psy10113 161 EKHGVNSFKTFMA-YKGLY----MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGI 221 (596)
Q Consensus 161 ~~~Gv~~~k~~~~-~~~~~----~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi 221 (596)
++-|++++-+..+ -||.+ .++.+.|.++- +..+.++..|--.+-. .+..+++.+.|+
T Consensus 165 ~~TgvD~LAvaiGt~HG~Y~~~p~Ldfd~l~~I~---~~~~vPLVLHGgSG~~-~e~~~kai~~GI 226 (286)
T PRK12738 165 ELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIR---EVVDVPLVLHGASDVP-DEFVRRTIELGV 226 (286)
T ss_pred HHhCCCEEEeccCcccCCCCCCCcCCHHHHHHHH---HHhCCCEEEeCCCCCC-HHHHHHHHHcCC
Confidence 7779998876553 33443 44555555543 3458999999554421 233444444444
No 168
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=64.44 E-value=1.2e+02 Score=33.41 Aligned_cols=129 Identities=19% Similarity=0.071 Sum_probs=72.0
Q ss_pred cch-HHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc-cccCCChhHHHHHHHHHHHcCCCE
Q psy10113 90 VDD-FYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV-GITWWSDQVQQEMAELCEKHGVNS 167 (596)
Q Consensus 90 ~d~-~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~lv~~~Gv~~ 167 (596)
++| +....+.|++.|+..++=+...+.-..+..+++..++.. ..+...+.. ..+.++.+..-++.+.+.+.|++.
T Consensus 93 ~dDvv~~fv~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G---~~v~~~i~~t~~p~~t~e~~~~~a~~l~~~Gad~ 169 (467)
T PRK14041 93 ADDVVELFVKKVAEYGLDIIRIFDALNDIRNLEKSIEVAKKHG---AHVQGAISYTVSPVHTLEYYLEFARELVDMGVDS 169 (467)
T ss_pred cchhhHHHHHHHHHCCcCEEEEEEeCCHHHHHHHHHHHHHHCC---CEEEEEEEeccCCCCCHHHHHHHHHHHHHcCCCE
Confidence 444 334477889999998864432222122333333333322 122211111 123455555556665556679987
Q ss_pred EEEEeecCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchhhh-HHHHHHHHHcCCCCC
Q psy10113 168 FKTFMAYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGEII-DKNTQKLLAAGIKGP 224 (596)
Q Consensus 168 ~k~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~~i-~~~~~~l~~~Gi~~~ 224 (596)
+-+.- ..-.+++.+++++++..++ .++++.+|+.|..-. ....-..++.|++..
T Consensus 170 I~i~D---t~G~l~P~~v~~Lv~~lk~~~~vpI~~H~Hnt~GlA~AN~laAieaGad~v 225 (467)
T PRK14041 170 ICIKD---MAGLLTPKRAYELVKALKKKFGVPVEVHSHCTTGLASLAYLAAVEAGADMF 225 (467)
T ss_pred EEECC---ccCCcCHHHHHHHHHHHHHhcCCceEEEecCCCCcHHHHHHHHHHhCCCEE
Confidence 64321 2234789999999988875 588999998765422 233455678886543
No 169
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=63.88 E-value=64 Score=32.74 Aligned_cols=98 Identities=15% Similarity=0.108 Sum_probs=55.6
Q ss_pred HHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCCcc--cCCChH
Q psy10113 161 EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPEGH--QLSRPE 233 (596)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~l~~~Gi~~~~~~--~~~~p~ 233 (596)
.+.|++++-+.-.......++.+|-.++++.+.+. ..++.+++. +.....+..+.+.+.|+++..-. .+..+.
T Consensus 31 ~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~~~~~~~vi~gv~~~~~~~~~~~a~~a~~~G~d~v~~~~P~~~~~~ 110 (284)
T cd00950 31 IENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEAVNGRVPVIAGTGSNNTAEAIELTKRAEKAGADAALVVTPYYNKPS 110 (284)
T ss_pred HHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHHhCCCCcEEeccCCccHHHHHHHHHHHHHcCCCEEEEcccccCCCC
Confidence 34688876554333344567888877777766654 356666653 34444556667777786642111 111122
Q ss_pred HHHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 234 EVEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 234 ~~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
+ .+.+.....++...+.|+.+.+.-
T Consensus 111 ~--~~l~~~~~~ia~~~~~pi~lYn~P 135 (284)
T cd00950 111 Q--EGLYAHFKAIAEATDLPVILYNVP 135 (284)
T ss_pred H--HHHHHHHHHHHhcCCCCEEEEECh
Confidence 2 223333444566678999988764
No 170
>TIGR01856 hisJ_fam histidinol phosphate phosphatase HisJ family. This model represents the histidinol phosphate phosphatase HisJ of Bacillus subtilis, and related proteins from a number of species within a larger family of phosphatases in the PHP hydrolase family. HisJ catalyzes the penultimate step of histidine biosynthesis but shows no homology to the functionally equivalent sequence in E. coli, a domain of the bifunctional HisB protein. Note, however, that many species have two members and that Clostridium perfringens, predicted not to make histidine, has five members of this family; this family is designated subfamily rather than equivalog to indicate that members may not all act as HisJ.
Probab=63.60 E-value=1.6e+02 Score=29.27 Aligned_cols=33 Identities=24% Similarity=0.256 Sum_probs=23.6
Q ss_pred cccccCCCccccCCCCcchHHHHHHHHHhCCceEEe
Q psy10113 74 IDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTII 109 (596)
Q Consensus 74 ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~ 109 (596)
+|.|+|......+. +.+..-.++|.+.|.+.+.
T Consensus 1 ~D~H~Ht~~s~d~~---~~~ee~v~~A~~~Gl~~i~ 33 (253)
T TIGR01856 1 RDGHSHSPFCAHGT---DTLEEVVQEAIQLGFEEIC 33 (253)
T ss_pred CCcccCcCCCCCCC---CCHHHHHHHHHHcCCCEEE
Confidence 58999986543333 4455558889999999973
No 171
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=63.22 E-value=2.7e+02 Score=31.70 Aligned_cols=160 Identities=20% Similarity=0.233 Sum_probs=96.0
Q ss_pred CCCcchHHHHHHHHHhCCceEEec-------cccCCCCccHHHHHHHHHHHhccCceeeeecc----ccccCCChhHHHH
Q psy10113 87 ATSVDDFYHGTKAAVAGGTTTIID-------FALPRKGESLIKTYESWRQKADEKVCCDYALH----VGITWWSDQVQQE 155 (596)
Q Consensus 87 ~~~~d~~~~g~~~al~~GtTti~D-------~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~e 155 (596)
.+..++...-+...-+.|+..+-- ...+..+++..+.++.+++... +...-..+. ++...+.+++.++
T Consensus 23 r~~~~d~l~ia~~ld~~G~~siE~~GGatf~~~~~~~~e~p~e~lr~l~~~~~-~~~lqml~Rg~n~vg~~~ypddvv~~ 101 (593)
T PRK14040 23 RLRLDDMLPIAAKLDKVGYWSLESWGGATFDACIRFLGEDPWERLRELKKAMP-NTPQQMLLRGQNLLGYRHYADDVVER 101 (593)
T ss_pred ccCHHHHHHHHHHHHHcCCCEEEecCCcchhhhccccCCCHHHHHHHHHHhCC-CCeEEEEecCcceeccccCcHHHHHH
Confidence 566777777777777788888732 1233345667777777777653 233222222 2334455566666
Q ss_pred HHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEE---e---c-CchhhhHHHHHHHHHcCCCCCC---
Q psy10113 156 MAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMV---H---A-ENGEIIDKNTQKLLAAGIKGPE--- 225 (596)
Q Consensus 156 ~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~v---H---a-e~~~~i~~~~~~l~~~Gi~~~~--- 225 (596)
.-+...+.|+..|.+|.... ..+.+...++.|++.|..+.+ + + .+.+...+..+.+.+.|.....
T Consensus 102 ~v~~a~~~Gid~~rifd~ln-----d~~~~~~ai~~ak~~G~~~~~~i~yt~~p~~~~~~~~~~a~~l~~~Gad~i~i~D 176 (593)
T PRK14040 102 FVERAVKNGMDVFRVFDAMN-----DPRNLETALKAVRKVGAHAQGTLSYTTSPVHTLQTWVDLAKQLEDMGVDSLCIKD 176 (593)
T ss_pred HHHHHHhcCCCEEEEeeeCC-----cHHHHHHHHHHHHHcCCeEEEEEEEeeCCccCHHHHHHHHHHHHHcCCCEEEECC
Confidence 66666678999999996432 235788999999999997432 2 1 1234455667778888875432
Q ss_pred cccCCChHHHHHHHHHHHHHHhcccCCCeEE
Q psy10113 226 GHQLSRPEEVEAEAVTRACTIANQVDCPLYV 256 (596)
Q Consensus 226 ~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i 256 (596)
-.-...|.++. +.+.+. ....+.|+++
T Consensus 177 t~G~l~P~~~~-~lv~~l---k~~~~~pi~~ 203 (593)
T PRK14040 177 MAGLLKPYAAY-ELVSRI---KKRVDVPLHL 203 (593)
T ss_pred CCCCcCHHHHH-HHHHHH---HHhcCCeEEE
Confidence 22345576653 322222 2334677775
No 172
>PRK09248 putative hydrolase; Validated
Probab=61.46 E-value=1.6e+02 Score=29.03 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=24.7
Q ss_pred ccccccCCCccccCCCCcchHHHHHHHHHhCCceEEe
Q psy10113 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTII 109 (596)
Q Consensus 73 ~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~ 109 (596)
++|.|+|......+..+ +..-.+.|.+.|.+.+.
T Consensus 4 ~~D~H~HT~~s~~~~~~---~~e~v~~A~~~G~~~i~ 37 (246)
T PRK09248 4 PVDTHTHTIASGHAYST---LHENAAEAKQKGLKLFA 37 (246)
T ss_pred ceEeCcCCCCCCCCCCC---HHHHHHHHHHCCCCEEE
Confidence 58999998765444334 44448889999999974
No 173
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=60.82 E-value=1.7e+02 Score=29.98 Aligned_cols=120 Identities=19% Similarity=0.214 Sum_probs=63.0
Q ss_pred HHHHHHHhCCceEEe-ccccCCCCccHHHHHHH---HHHHhcc-Cceee--eeccccccC---CC---hhHHHHHHHHHH
Q psy10113 95 HGTKAAVAGGTTTII-DFALPRKGESLIKTYES---WRQKADE-KVCCD--YALHVGITW---WS---DQVQQEMAELCE 161 (596)
Q Consensus 95 ~g~~~al~~GtTti~-D~~~~~~~~~~~~a~~~---~~~~~~~-~~~~~--~~~~~~~~~---~~---~~~~~e~~~lv~ 161 (596)
...+.|++.|+|+|. |. +..++.+.++. ..+.+.. +..+. .|.-.+... .. -...++..++++
T Consensus 91 e~i~~ai~~GftSVM~Dg----S~lp~eeNi~~Trevv~~Ah~~gv~VEaElG~igg~ed~~~~~~~~yT~peeA~~Fv~ 166 (285)
T PRK07709 91 EKCKEAIDAGFTSVMIDA----SHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVE 166 (285)
T ss_pred HHHHHHHHcCCCEEEEeC----CCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeccCCccCCcccccccCCCHHHHHHHHH
Confidence 346788999999994 32 22344444443 3333332 12221 111111111 00 123567778888
Q ss_pred HcCCCEEEEEee-----cCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCC
Q psy10113 162 KHGVNSFKTFMA-----YKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIK 222 (596)
Q Consensus 162 ~~Gv~~~k~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~ 222 (596)
+-|++++-+..+ |++.+.++.+.|.++. +..+.++..|--.+- -.+..+++.+.|+.
T Consensus 167 ~TgvD~LAvaiGt~HG~Y~~~p~L~~~~L~~I~---~~~~iPLVLHGgSG~-~~e~~~~ai~~Gi~ 228 (285)
T PRK07709 167 ATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVR---DFTGVPLVLHGGTGI-PTADIEKAISLGTS 228 (285)
T ss_pred HhCCCEEEEeecccccCcCCCCccCHHHHHHHH---HHHCCCEEEeCCCCC-CHHHHHHHHHcCCe
Confidence 789998876553 4443455666666653 456899999965432 12334445555543
No 174
>TIGR03217 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase. Members of this protein family are 4-hydroxy-2-oxovalerate aldolase, also called 4-hydroxy-2-ketovalerate aldolase and 2-oxo-4-hydroxypentanoate aldolase. This enzyme, part of the pathway for the meta-cleavage of catechol, produces pyruvate and acetaldehyde. Acetaldehyde is then converted by acetaldehyde dehydrogenase (acylating) (DmpF; EC 1.2.1.10) to acetyl-CoA. The two enzymes are tightly associated.
Probab=60.55 E-value=2.1e+02 Score=30.01 Aligned_cols=104 Identities=16% Similarity=0.052 Sum_probs=58.7
Q ss_pred HHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCC
Q psy10113 97 TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKG 176 (596)
Q Consensus 97 ~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~ 176 (596)
.+.|...|+..|+=+..........+.++..++. ..-.....+.....+++...++.+.+.+.|++.|-+.-+
T Consensus 93 l~~a~~~gvd~iri~~~~~e~d~~~~~i~~ak~~----G~~v~~~l~~s~~~~~e~l~~~a~~~~~~Ga~~i~i~DT--- 165 (333)
T TIGR03217 93 LKAAYDAGARTVRVATHCTEADVSEQHIGMAREL----GMDTVGFLMMSHMTPPEKLAEQAKLMESYGADCVYIVDS--- 165 (333)
T ss_pred HHHHHHCCCCEEEEEeccchHHHHHHHHHHHHHc----CCeEEEEEEcccCCCHHHHHHHHHHHHhcCCCEEEEccC---
Confidence 5678888998886221111111222233333322 221122222234455565666666666679987644322
Q ss_pred CccCCHHHHHHHHHHHHh-cC--CeEEEecCchh
Q psy10113 177 LYMLSDGELYDAFSAIKN-LG--AIAMVHAENGE 207 (596)
Q Consensus 177 ~~~~~~~~l~~~~~~a~~-~g--~~~~vHae~~~ 207 (596)
.-.++++++.+.++.+++ ++ +++.+|+.|.-
T Consensus 166 ~G~~~P~~v~~~v~~l~~~l~~~i~ig~H~Hnnl 199 (333)
T TIGR03217 166 AGAMLPDDVRDRVRALKAVLKPETQVGFHAHHNL 199 (333)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCceEEEEeCCCC
Confidence 234788999999988875 45 88999987753
No 175
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=60.11 E-value=93 Score=31.42 Aligned_cols=95 Identities=16% Similarity=0.121 Sum_probs=55.3
Q ss_pred HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCC----cccCCCh
Q psy10113 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE----GHQLSRP 232 (596)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~l~~~Gi~~~~----~~~~~~p 232 (596)
+.|++++-+.-.-.....++.+|-.++++.+.+. ..++.+++. +.....+..+...+.|+++.. .+....+
T Consensus 29 ~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~gv~~~~~~~~i~~a~~a~~~Gad~v~v~pP~y~~~~~ 108 (281)
T cd00408 29 EAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIAGVGANSTREAIELARHAEEAGADGVLVVPPYYNKPSQ 108 (281)
T ss_pred HcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEEEecCCccHHHHHHHHHHHHHcCCCEEEECCCcCCCCCH
Confidence 4588887655444445667888877777766543 466777753 333344555667777766522 2222222
Q ss_pred HHHHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 233 EEVEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 233 ~~~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
+ +.+..-..++...+.|+.+.+.-
T Consensus 109 ~----~~~~~~~~ia~~~~~pi~iYn~P 132 (281)
T cd00408 109 E----GIVAHFKAVADASDLPVILYNIP 132 (281)
T ss_pred H----HHHHHHHHHHhcCCCCEEEEECc
Confidence 2 22333444566678999988765
No 176
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=59.79 E-value=1.4e+02 Score=30.40 Aligned_cols=119 Identities=17% Similarity=0.175 Sum_probs=62.0
Q ss_pred HHHHHHHhCCceEEe-ccccCCCCccHHHHHHH---HHHHhccCc-ee--eeeccccccC----CC-h---hHHHHHHHH
Q psy10113 95 HGTKAAVAGGTTTII-DFALPRKGESLIKTYES---WRQKADEKV-CC--DYALHVGITW----WS-D---QVQQEMAEL 159 (596)
Q Consensus 95 ~g~~~al~~GtTti~-D~~~~~~~~~~~~a~~~---~~~~~~~~~-~~--~~~~~~~~~~----~~-~---~~~~e~~~l 159 (596)
...+.|++.|+|+|+ |. +..++.+.++. ..+.+.... .+ ..|--.+... .. + ...++..++
T Consensus 86 e~i~~ai~~GFtSVM~Dg----S~lp~eeNi~~T~~vv~~Ah~~gv~VEaElG~vgg~e~~~~~~~~~~~~T~peea~~F 161 (282)
T TIGR01858 86 DDIRQKVHAGVRSAMIDG----SHFPFAQNVKLVKEVVDFCHRQDCSVEAELGRLGGVEDDLSVDEEDALYTDPQEAKEF 161 (282)
T ss_pred HHHHHHHHcCCCEEeecC----CCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEecCCccCCCccccchhccCCHHHHHHH
Confidence 347889999999994 32 22344444433 333333221 11 1111111111 11 1 124677788
Q ss_pred HHHcCCCEEEEEee-----cCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCC
Q psy10113 160 CEKHGVNSFKTFMA-----YKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGI 221 (596)
Q Consensus 160 v~~~Gv~~~k~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi 221 (596)
+++-|++.+-+..+ |++.+.++.+.|.++-+ ..+.++..|--.+-. .+..+++.+.|+
T Consensus 162 v~~TgvD~LAvaiGt~HG~yk~~p~Ldf~~L~~I~~---~~~iPLVlHGgSG~~-~e~~~~ai~~Gi 224 (282)
T TIGR01858 162 VEATGVDSLAVAIGTAHGLYKKTPKLDFDRLAEIRE---VVDVPLVLHGASDVP-DEDVRRTIELGI 224 (282)
T ss_pred HHHHCcCEEecccCccccCcCCCCccCHHHHHHHHH---HhCCCeEEecCCCCC-HHHHHHHHHcCC
Confidence 88789998876553 33334566666666643 458999999654421 233444444444
No 177
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated
Probab=59.09 E-value=1.9e+02 Score=30.27 Aligned_cols=120 Identities=15% Similarity=0.012 Sum_probs=65.7
Q ss_pred HHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCC
Q psy10113 97 TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKG 176 (596)
Q Consensus 97 ~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~ 176 (596)
.+.|+..|+..|+=+..........+.++..++.. ..+...+ .....++++...++.+.+.+.|+..+-+.- .
T Consensus 94 l~~a~~~gvd~iri~~~~~e~~~~~~~i~~ak~~G---~~v~~~l-~~a~~~~~e~l~~~a~~~~~~Ga~~i~i~D---T 166 (337)
T PRK08195 94 LKMAYDAGVRVVRVATHCTEADVSEQHIGLARELG---MDTVGFL-MMSHMAPPEKLAEQAKLMESYGAQCVYVVD---S 166 (337)
T ss_pred HHHHHHcCCCEEEEEEecchHHHHHHHHHHHHHCC---CeEEEEE-EeccCCCHHHHHHHHHHHHhCCCCEEEeCC---C
Confidence 56788889998762221111112233333333322 1222222 223445666555666666667998764332 2
Q ss_pred CccCCHHHHHHHHHHHHhc---CCeEEEecCchhh-hHHHHHHHHHcCCCC
Q psy10113 177 LYMLSDGELYDAFSAIKNL---GAIAMVHAENGEI-IDKNTQKLLAAGIKG 223 (596)
Q Consensus 177 ~~~~~~~~l~~~~~~a~~~---g~~~~vHae~~~~-i~~~~~~l~~~Gi~~ 223 (596)
.-.+.++++++.++..++. +.++.+|+.|.-- -.......++.|++.
T Consensus 167 ~G~~~P~~v~~~v~~l~~~l~~~i~ig~H~HnnlGla~ANslaAi~aGa~~ 217 (337)
T PRK08195 167 AGALLPEDVRDRVRALRAALKPDTQVGFHGHNNLGLGVANSLAAVEAGATR 217 (337)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCcchHHHHHHHHHHhCCCE
Confidence 2357899999999988864 6889999877532 222333444556543
No 178
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=58.31 E-value=1.8e+02 Score=29.71 Aligned_cols=119 Identities=23% Similarity=0.246 Sum_probs=61.9
Q ss_pred HHHHHHhCCceEEe-ccccCCCCccHHHHHHH---HHHHhcc-Ccee--eeeccccccC---CCh---hHHHHHHHHHHH
Q psy10113 96 GTKAAVAGGTTTII-DFALPRKGESLIKTYES---WRQKADE-KVCC--DYALHVGITW---WSD---QVQQEMAELCEK 162 (596)
Q Consensus 96 g~~~al~~GtTti~-D~~~~~~~~~~~~a~~~---~~~~~~~-~~~~--~~~~~~~~~~---~~~---~~~~e~~~lv~~ 162 (596)
..+.|++.|+|+|. |. +..++.+.++. ..+.+.. +..+ ..|.-.+... ... ...++..+++++
T Consensus 92 ~i~~ai~~GftSVM~Dg----S~l~~eeNi~~T~~vve~Ah~~gv~VEaElG~vgg~ed~~~~~~~~yT~peea~~Fv~~ 167 (286)
T PRK08610 92 KCKEAIDAGFTSVMIDA----SHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGGQEDDVVADGIIYADPKECQELVEK 167 (286)
T ss_pred HHHHHHHcCCCEEEEeC----CCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeccCCccCCCCCcccccCCHHHHHHHHHH
Confidence 35778999999994 32 22344444433 3333332 1111 1111111110 001 245677788877
Q ss_pred cCCCEEEEEee-----cCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCC
Q psy10113 163 HGVNSFKTFMA-----YKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIK 222 (596)
Q Consensus 163 ~Gv~~~k~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~ 222 (596)
-|++++-+..+ |++.+.++.+.|.++. +..++++..|--.+- -.+..+++...|+.
T Consensus 168 TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~---~~~~vPLVLHGgSG~-~~e~~~~ai~~GI~ 228 (286)
T PRK08610 168 TGIDALAPALGSVHGPYKGEPKLGFKEMEEIG---LSTGLPLVLHGGTGI-PTKDIQKAIPFGTA 228 (286)
T ss_pred HCCCEEEeeccccccccCCCCCCCHHHHHHHH---HHHCCCEEEeCCCCC-CHHHHHHHHHCCCe
Confidence 79998876553 3333455666666654 345899999965432 12334444455543
No 179
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=57.90 E-value=99 Score=31.54 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=54.5
Q ss_pred HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCCc--ccCCChHH
Q psy10113 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPEG--HQLSRPEE 234 (596)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~l~~~Gi~~~~~--~~~~~p~~ 234 (596)
+.|++++-+.-.......++++|-.++++.+.+. ..++.+|+. +.....+..+.+.+.|+++.-- ..+..+.+
T Consensus 33 ~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~~~~~~~vi~gv~~~~~~~~i~~a~~a~~~G~d~v~~~pP~~~~~~~ 112 (292)
T PRK03170 33 ANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEAVNGRVPVIAGTGSNSTAEAIELTKFAEKAGADGALVVTPYYNKPTQ 112 (292)
T ss_pred HcCCCEEEECCcCCccccCCHHHHHHHHHHHHHHhCCCCcEEeecCCchHHHHHHHHHHHHHcCCCEEEECCCcCCCCCH
Confidence 4688877654444444567888877776655543 356777753 3344445566677777654221 11122222
Q ss_pred HHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 235 VEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 235 ~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
.+.+..-..++...+.|+.+.+.-
T Consensus 113 --~~i~~~~~~ia~~~~~pv~lYn~P 136 (292)
T PRK03170 113 --EGLYQHFKAIAEATDLPIILYNVP 136 (292)
T ss_pred --HHHHHHHHHHHhcCCCCEEEEECc
Confidence 222333444566678999988763
No 180
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=57.80 E-value=58 Score=34.32 Aligned_cols=111 Identities=12% Similarity=0.190 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHHcCCCEEEEEee-c--CC-CccCCHHHHHHHHHHHHhcCCeEEEe------cCchhhhHHHHHHHHHcC
Q psy10113 151 QVQQEMAELCEKHGVNSFKTFMA-Y--KG-LYMLSDGELYDAFSAIKNLGAIAMVH------AENGEIIDKNTQKLLAAG 220 (596)
Q Consensus 151 ~~~~e~~~lv~~~Gv~~~k~~~~-~--~~-~~~~~~~~l~~~~~~a~~~g~~~~vH------ae~~~~i~~~~~~l~~~G 220 (596)
...+.+..+++ .|++.+-+... + +. ....+.+++.+.++.|+++|..+.+- ..+-..+.+....+.+.|
T Consensus 14 g~l~~l~~ai~-~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gkk~~V~~N~~~~~~~~~~~~~~l~~l~e~G 92 (347)
T COG0826 14 GNLEDLKAAIA-AGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGKKVYVAVNTLLHNDELETLERYLDRLVELG 92 (347)
T ss_pred CCHHHHHHHHH-cCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccccccchhhHHHHHHHHHHHcC
Confidence 34555666654 36654322211 1 11 13578899999999999999966553 333333467778888888
Q ss_pred CCCCCcccCCChHHHHHHHHHHHHHHhcccC--CCeEEEecCcHHHHHHHHHHHHH
Q psy10113 221 IKGPEGHQLSRPEEVEAEAVTRACTIANQVD--CPLYVVHIMSKAAGDAMAYKRKE 274 (596)
Q Consensus 221 i~~~~~~~~~~p~~~e~~a~~~~i~la~~~~--~p~~i~hv~s~~~~~~i~~a~~~ 274 (596)
++.. ..+.| .++.++++.+ .|+|+.+.++....+.++..++.
T Consensus 93 vDav---iv~Dp---------g~i~l~~e~~p~l~ih~S~q~~v~N~~~~~f~~~~ 136 (347)
T COG0826 93 VDAV---IVADP---------GLIMLARERGPDLPIHVSTQANVTNAETAKFWKEL 136 (347)
T ss_pred CCEE---EEcCH---------HHHHHHHHhCCCCcEEEeeeEecCCHHHHHHHHHc
Confidence 8753 22333 2445556554 88888777765555555555555
No 181
>TIGR00587 nfo apurinic endonuclease (APN1). All proteins in this family for which functions are known are 5' AP endonculeases that are used in base excision repair and the repair of abasic sites in DNA.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=57.54 E-value=1e+02 Score=31.13 Aligned_cols=91 Identities=19% Similarity=0.208 Sum_probs=56.2
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCCc---cCCHHHHHHHHHHHHhcCCe---EEEecCch-hhhHHHHHHHHHcCCCCCC
Q psy10113 153 QQEMAELCEKHGVNSFKTFMAYKGLY---MLSDGELYDAFSAIKNLGAI---AMVHAENG-EIIDKNTQKLLAAGIKGPE 225 (596)
Q Consensus 153 ~~e~~~lv~~~Gv~~~k~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~---~~vHae~~-~~i~~~~~~l~~~Gi~~~~ 225 (596)
.+.++++ .+.|.+.|.+|......+ ..+.....++.+.+.+.++. +.+|+.-. .+.. +
T Consensus 14 ~~a~~~~-~~~G~~~~qif~~~P~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Hapy~iNlas-------------~- 78 (274)
T TIGR00587 14 QAAYNRA-AEIGATAFMFFLKSPRWWRRPMLEEEVIDWFKAALETNKNLSQIVLVHAPYLINLAS-------------P- 78 (274)
T ss_pred HHHHHHH-HHhCCCEEEEEecCccccCCCCCCHHHHHHHHHHHHHcCCCCcceeccCCeeeecCC-------------C-
Confidence 3344444 356999999998754432 34466666666667777765 78886431 1000 0
Q ss_pred cccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCc
Q psy10113 226 GHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMS 261 (596)
Q Consensus 226 ~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s 261 (596)
-..-.+...+.+.+.+++|...+++..++|..+
T Consensus 79 ---~~~~r~~sv~~~~~~i~~A~~lga~~vv~H~G~ 111 (274)
T TIGR00587 79 ---DEEKEEKSLDVLDEELKRCELLGIMLYNFHPGS 111 (274)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 000011224677889999999999999988864
No 182
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=56.03 E-value=3.2e+02 Score=30.23 Aligned_cols=21 Identities=24% Similarity=0.191 Sum_probs=17.7
Q ss_pred HHHHHhcCCccEEeCCCCCCC
Q psy10113 326 LLTLLNENALQTTGSDNCTFN 346 (596)
Q Consensus 326 l~~~l~~G~~~~~gsD~~~~~ 346 (596)
+..++++|++++++||..++.
T Consensus 396 l~~lla~Gvpv~InSDDP~~~ 416 (479)
T TIGR01431 396 CAYLFADNYPMVISSDDPAFW 416 (479)
T ss_pred HHHHHHCCCcEEEeCCCcccc
Confidence 447899999999999997654
No 183
>PRK09282 pyruvate carboxylase subunit B; Validated
Probab=55.83 E-value=1.8e+02 Score=33.10 Aligned_cols=125 Identities=13% Similarity=0.046 Sum_probs=70.8
Q ss_pred HHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc-cccCCChhHHHHHHHHHHHcCCCEEEEEe
Q psy10113 94 YHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV-GITWWSDQVQQEMAELCEKHGVNSFKTFM 172 (596)
Q Consensus 94 ~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~ 172 (596)
..-.+.|++.|+..++=+...+....+..+++..++.. ..+...+.. ..+.++.+..-++.+.+.+.|+..+-+.-
T Consensus 99 ~~~v~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G---~~v~~~i~~t~~p~~t~~~~~~~a~~l~~~Gad~I~i~D 175 (592)
T PRK09282 99 EKFVEKAAENGIDIFRIFDALNDVRNMEVAIKAAKKAG---AHVQGTISYTTSPVHTIEKYVELAKELEEMGCDSICIKD 175 (592)
T ss_pred HHHHHHHHHCCCCEEEEEEecChHHHHHHHHHHHHHcC---CEEEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 34567888999998864432222223444444444332 222222211 12445555555555444567998764332
Q ss_pred ecCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchhhh-HHHHHHHHHcCCCCC
Q psy10113 173 AYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGEII-DKNTQKLLAAGIKGP 224 (596)
Q Consensus 173 ~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~~i-~~~~~~l~~~Gi~~~ 224 (596)
..-.+.+.+++++++..++ .++++.+|+.|..-. ....-..++.|++..
T Consensus 176 ---t~G~~~P~~~~~lv~~lk~~~~~pi~~H~Hnt~Gla~An~laAv~aGad~v 226 (592)
T PRK09282 176 ---MAGLLTPYAAYELVKALKEEVDLPVQLHSHCTSGLAPMTYLKAVEAGVDII 226 (592)
T ss_pred ---cCCCcCHHHHHHHHHHHHHhCCCeEEEEEcCCCCcHHHHHHHHHHhCCCEE
Confidence 1234688999999988875 578899998765422 233455667786543
No 184
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=54.96 E-value=2.1e+02 Score=29.26 Aligned_cols=119 Identities=19% Similarity=0.219 Sum_probs=61.2
Q ss_pred HHHHHHHhCCceEEe-ccccCCCCccHHHHHHHH---HHHhccC-cee--eeeccccccC----CC-h---hHHHHHHHH
Q psy10113 95 HGTKAAVAGGTTTII-DFALPRKGESLIKTYESW---RQKADEK-VCC--DYALHVGITW----WS-D---QVQQEMAEL 159 (596)
Q Consensus 95 ~g~~~al~~GtTti~-D~~~~~~~~~~~~a~~~~---~~~~~~~-~~~--~~~~~~~~~~----~~-~---~~~~e~~~l 159 (596)
...+.|++.|+|+|. |. +..++.+.++.. .+.+... ..+ ..|--.+... .. + ...++..++
T Consensus 88 e~i~~ai~~GftSVMiDg----S~lp~eeNi~~T~~vv~~Ah~~gvsVEaElG~igg~e~~~~~~~~~~~~T~peeA~~F 163 (284)
T PRK12737 88 DDIKKKVRAGIRSVMIDG----SHLSFEENIAIVKEVVEFCHRYDASVEAELGRLGGQEDDLVVDEKDAMYTNPDAAAEF 163 (284)
T ss_pred HHHHHHHHcCCCeEEecC----CCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCcccccccccCCCHHHHHHH
Confidence 347889999999994 32 223444444433 3333322 111 1111111111 00 0 134677788
Q ss_pred HHHcCCCEEEEEee-----cCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCC
Q psy10113 160 CEKHGVNSFKTFMA-----YKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGI 221 (596)
Q Consensus 160 v~~~Gv~~~k~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi 221 (596)
+++-|++.+-+..+ |++.+.++.+.|.++-+ ..+.++..|--.+- -.+..+++.+.|+
T Consensus 164 v~~TgvD~LAvaiGt~HG~y~~~p~Ld~~~L~~I~~---~~~iPLVlHGgSG~-~~e~~~kai~~Gi 226 (284)
T PRK12737 164 VERTGIDSLAVAIGTAHGLYKGEPKLDFERLAEIRE---KVSIPLVLHGASGV-PDEDVKKAISLGI 226 (284)
T ss_pred HHHhCCCEEeeccCccccccCCCCcCCHHHHHHHHH---HhCCCEEEeCCCCC-CHHHHHHHHHCCC
Confidence 88789998876553 33333455555555533 44899999955442 1233444444444
No 185
>cd00019 AP2Ec AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar.
Probab=54.50 E-value=1.9e+02 Score=28.93 Aligned_cols=90 Identities=13% Similarity=0.103 Sum_probs=58.6
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCCc---cCCHHHHHHHHHHHHhc-CCeEEEecCch-hhhHHHHHHHHHcCCCCCCcc
Q psy10113 153 QQEMAELCEKHGVNSFKTFMAYKGLY---MLSDGELYDAFSAIKNL-GAIAMVHAENG-EIIDKNTQKLLAAGIKGPEGH 227 (596)
Q Consensus 153 ~~e~~~lv~~~Gv~~~k~~~~~~~~~---~~~~~~l~~~~~~a~~~-g~~~~vHae~~-~~i~~~~~~l~~~Gi~~~~~~ 227 (596)
.++.-+++++.|.+.+.+.+...... ..+.+++.++.+.+.++ ++.+.+|+... ... .
T Consensus 12 l~~~l~~a~~~G~d~vEl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~-------------~---- 74 (279)
T cd00019 12 LENALKRAKEIGFDTVAMFLGNPRSWLSRPLKKERAEKFKAIAEEGPSICLSVHAPYLINLA-------------S---- 74 (279)
T ss_pred HHHHHHHHHHcCCCEEEEEcCCCCccCCCCCCHHHHHHHHHHHHHcCCCcEEEEcCceeccC-------------C----
Confidence 34444555677988888776543222 13568899999999998 88888886421 000 0
Q ss_pred cCCCh--HHHHHHHHHHHHHHhcccCCCeEEEecCc
Q psy10113 228 QLSRP--EEVEAEAVTRACTIANQVDCPLYVVHIMS 261 (596)
Q Consensus 228 ~~~~p--~~~e~~a~~~~i~la~~~~~p~~i~hv~s 261 (596)
..+ ..-..+.+.+++++|...+++..+.|...
T Consensus 75 --~~~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~g~ 108 (279)
T cd00019 75 --PDKEKREKSIERLKDEIERCEELGIRLLVFHPGS 108 (279)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 001 11224667889999999999988887764
No 186
>PRK06361 hypothetical protein; Provisional
Probab=53.75 E-value=2.1e+02 Score=27.44 Aligned_cols=56 Identities=9% Similarity=-0.014 Sum_probs=37.5
Q ss_pred HHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCC
Q psy10113 327 LTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNL 403 (596)
Q Consensus 327 ~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl 403 (596)
..+.+.|..++++||........ .+.. ........+++.++++.+.+.||+.++++
T Consensus 155 ~~a~~~gi~vv~~SDaH~~~d~~--------------------~~~~-~~~i~~~~gl~~~~v~~~~~~~~~~~~~~ 210 (212)
T PRK06361 155 RIAREAGAPLVINTDTHAPSDLI--------------------TYEF-ARKVALGAGLTEKELEEALENNPKLLLKR 210 (212)
T ss_pred HHHHHhCCcEEEECCCCCHHHHH--------------------HHHH-HHHHHcCCCCCHHHHHHHHHHhHHHHHHh
Confidence 33445699999999965211100 0111 11234678899999999999999999875
No 187
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=52.62 E-value=1.1e+02 Score=31.49 Aligned_cols=97 Identities=18% Similarity=0.060 Sum_probs=57.2
Q ss_pred HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHh---cCCeEEEecC--chhhhHHHHHHHHHcCCCCCCcc--cCCChHH
Q psy10113 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKN---LGAIAMVHAE--NGEIIDKNTQKLLAAGIKGPEGH--QLSRPEE 234 (596)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~~~vHae--~~~~i~~~~~~l~~~Gi~~~~~~--~~~~p~~ 234 (596)
+.|++++-+.-+......++++|-.++++.+.+ -.+++.+|+. +.....+..+...+.|.++.--. ++..+.+
T Consensus 40 ~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi~Gv~~~~t~~ai~~a~~A~~~Gad~vlv~~P~y~~~~~ 119 (309)
T cd00952 40 AAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVFVGATTLNTRDTIARTRALLDLGADGTMLGRPMWLPLDV 119 (309)
T ss_pred HcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHHhCCCEEEECCCcCCCCCH
Confidence 468888765544445567899887777776554 2366777753 44455566677778886642211 1122222
Q ss_pred HHHHHHHHHHHHhccc-CCCeEEEecC
Q psy10113 235 VEAEAVTRACTIANQV-DCPLYVVHIM 260 (596)
Q Consensus 235 ~e~~a~~~~i~la~~~-~~p~~i~hv~ 260 (596)
- +.+..--.++... +.|+.+.|.-
T Consensus 120 ~--~l~~yf~~va~a~~~lPv~iYn~P 144 (309)
T cd00952 120 D--TAVQFYRDVAEAVPEMAIAIYANP 144 (309)
T ss_pred H--HHHHHHHHHHHhCCCCcEEEEcCc
Confidence 2 2222333455667 6999998875
No 188
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=51.54 E-value=1.5e+02 Score=30.06 Aligned_cols=97 Identities=15% Similarity=0.101 Sum_probs=54.4
Q ss_pred HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCCcc--cCCChHH
Q psy10113 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPEGH--QLSRPEE 234 (596)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~l~~~Gi~~~~~~--~~~~p~~ 234 (596)
+.|++++-+.-.......++++|-.++++.+.+. ..++.+++. +.....+..+...+.|+++.--. .+..+.+
T Consensus 30 ~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~~~~~~~vi~gv~~~s~~~~i~~a~~a~~~Gad~v~v~pP~y~~~~~ 109 (285)
T TIGR00674 30 ENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDLVNGRVPVIAGTGSNATEEAISLTKFAEDVGADGFLVVTPYYNKPTQ 109 (285)
T ss_pred HcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCccHHHHHHHHHHHHHcCCCEEEEcCCcCCCCCH
Confidence 4688877544333344567888877777765543 356777753 33344455666777786542211 1122222
Q ss_pred HHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 235 VEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 235 ~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
- +.+..-..++...+.|+.+.+.-
T Consensus 110 ~--~i~~~~~~i~~~~~~pi~lYn~P 133 (285)
T TIGR00674 110 E--GLYQHFKAIAEEVDLPIILYNVP 133 (285)
T ss_pred H--HHHHHHHHHHhcCCCCEEEEECc
Confidence 2 22233444566678999888764
No 189
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=50.18 E-value=2.7e+02 Score=31.65 Aligned_cols=126 Identities=17% Similarity=0.141 Sum_probs=71.1
Q ss_pred HHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc-cccCCChhHHHHHHHHHHHcCCCEEEEE
Q psy10113 93 FYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV-GITWWSDQVQQEMAELCEKHGVNSFKTF 171 (596)
Q Consensus 93 ~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~lv~~~Gv~~~k~~ 171 (596)
...-.+.|++.|+..++=+...+....+..+++..++.. ..+...+.. ..+..+.+..-++.+.+.+.|+..+-+.
T Consensus 93 v~~~v~~a~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G---~~v~~~i~~t~~p~~~~~~~~~~~~~~~~~Gad~I~i~ 169 (582)
T TIGR01108 93 VERFVKKAVENGMDVFRIFDALNDPRNLQAAIQAAKKHG---AHAQGTISYTTSPVHTLETYLDLAEELLEMGVDSICIK 169 (582)
T ss_pred HHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcC---CEEEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 344567889999998764432222223334444443332 222222211 1333455555555555556799876432
Q ss_pred eecCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchhhh-HHHHHHHHHcCCCCC
Q psy10113 172 MAYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGEII-DKNTQKLLAAGIKGP 224 (596)
Q Consensus 172 ~~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~~i-~~~~~~l~~~Gi~~~ 224 (596)
- ..-.+++.+++++++..++ .++++.+|+.|..-. ....-..++.|++..
T Consensus 170 D---t~G~~~P~~v~~lv~~lk~~~~~pi~~H~Hnt~Gla~An~laAveaGa~~v 221 (582)
T TIGR01108 170 D---MAGILTPKAAYELVSALKKRFGLPVHLHSHATTGMAEMALLKAIEAGADGI 221 (582)
T ss_pred C---CCCCcCHHHHHHHHHHHHHhCCCceEEEecCCCCcHHHHHHHHHHhCCCEE
Confidence 2 1234688999999988875 578899998775422 233445667776543
No 190
>PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF. A mutation in one or more of these genes results in an increased copper sensitivity. Members of this family are between 200 and 300 amino acids in length and are found in both eukaryotes and bacteria.; GO: 0005507 copper ion binding, 0055070 copper ion homeostasis; PDB: 2BDQ_A 3IWP_I 1X8C_B 1X7I_A 1TWD_B.
Probab=50.02 E-value=2.5e+02 Score=27.15 Aligned_cols=127 Identities=18% Similarity=0.118 Sum_probs=60.1
Q ss_pred HHHHHHHhCCceEEeccccC-CCC-ccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHH---HHHHcCCCEEE
Q psy10113 95 HGTKAAVAGGTTTIIDFALP-RKG-ESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAE---LCEKHGVNSFK 169 (596)
Q Consensus 95 ~g~~~al~~GtTti~D~~~~-~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~---lv~~~Gv~~~k 169 (596)
..+..|.++|-.-|-=...- ..| .+....++..++.......+-.-.+.+.-.+++...+.|.+ .+++.|+++|-
T Consensus 11 ~~a~~A~~~GAdRiELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRpr~gdF~Ys~~E~~~M~~dI~~~~~~GadG~V 90 (201)
T PF03932_consen 11 EDALAAEAGGADRIELCSNLEVGGLTPSLGLIRQAREAVDIPVHVMIRPRGGDFVYSDEEIEIMKEDIRMLRELGADGFV 90 (201)
T ss_dssp HHHHHHHHTT-SEEEEEBTGGGT-B---HHHHHHHHHHTTSEEEEE--SSSS-S---HHHHHHHHHHHHHHHHTT-SEEE
T ss_pred HHHHHHHHcCCCEEEECCCccCCCcCcCHHHHHHHHhhcCCceEEEECCCCCCccCCHHHHHHHHHHHHHHHHcCCCeeE
Confidence 44667788888887421111 111 12344555555544333333333332222345554444443 23457999885
Q ss_pred EEeecCCCccCCHHHHHHHHHHHHhcCCeEEEec-Cch-hhhHHHHHHHHHcCCCCC
Q psy10113 170 TFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHA-ENG-EIIDKNTQKLLAAGIKGP 224 (596)
Q Consensus 170 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHa-e~~-~~i~~~~~~l~~~Gi~~~ 224 (596)
... ......++.+.+.++.+.|+ +++++.|- .+. .-..+..+.+.+.|++..
T Consensus 91 fG~-L~~dg~iD~~~~~~Li~~a~--~~~~tFHRAfD~~~d~~~al~~L~~lG~~rV 144 (201)
T PF03932_consen 91 FGA-LTEDGEIDEEALEELIEAAG--GMPVTFHRAFDEVPDPEEALEQLIELGFDRV 144 (201)
T ss_dssp E---BETTSSB-HHHHHHHHHHHT--TSEEEE-GGGGGSSTHHHHHHHHHHHT-SEE
T ss_pred EEe-ECCCCCcCHHHHHHHHHhcC--CCeEEEeCcHHHhCCHHHHHHHHHhcCCCEE
Confidence 432 22334578888999999886 88999993 211 112345666777776654
No 191
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=49.26 E-value=1.6e+02 Score=29.94 Aligned_cols=108 Identities=14% Similarity=0.066 Sum_probs=59.7
Q ss_pred HHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc---CCeEEEecC-chhhhHHHHHHHHHcCCCC----CCcccCCCh
Q psy10113 161 EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE-NGEIIDKNTQKLLAAGIKG----PEGHQLSRP 232 (596)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae-~~~~i~~~~~~l~~~Gi~~----~~~~~~~~p 232 (596)
.+.|++++-+.-+......++.+|-.++++.+.+. .+++.+++. +.....+..+...+.|+++ |-.+.....
T Consensus 31 ~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~gv~~~t~~~i~~a~~a~~~Gad~v~~~pP~y~~~~~ 110 (289)
T cd00951 31 LSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLAGAGYGTATAIAYAQAAEKAGADGILLLPPYLTEAPQ 110 (289)
T ss_pred HHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEEecCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCH
Confidence 34688877655444445678888877777665543 366677653 3333444566777778665 222222222
Q ss_pred HHHHHHHHHHHHHHhcccCCCeEEEecCc-HHHHHHHHHHH
Q psy10113 233 EEVEAEAVTRACTIANQVDCPLYVVHIMS-KAAGDAMAYKR 272 (596)
Q Consensus 233 ~~~e~~a~~~~i~la~~~~~p~~i~hv~s-~~~~~~i~~a~ 272 (596)
+ +.+..--.++...+.|+.+.+... .-..+.+.+..
T Consensus 111 ~----~i~~~f~~v~~~~~~pi~lYn~~g~~l~~~~l~~L~ 147 (289)
T cd00951 111 E----GLYAHVEAVCKSTDLGVIVYNRANAVLTADSLARLA 147 (289)
T ss_pred H----HHHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 2 222223345566789988887432 22344555443
No 192
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=48.42 E-value=1.9e+02 Score=29.43 Aligned_cols=66 Identities=23% Similarity=0.352 Sum_probs=38.7
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cCC-CccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCC
Q psy10113 153 QQEMAELCEKHGVNSFKTFMA-----YKG-LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIK 222 (596)
Q Consensus 153 ~~e~~~lv~~~Gv~~~k~~~~-----~~~-~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~ 222 (596)
.++..+++++-|++.+-+..+ |++ .+.++.+.|.++-+. .+.++..|--.+- -.+..+++.+.|+.
T Consensus 150 pe~a~~Fv~~TgvD~LAvsiGt~HG~Y~~~~p~L~~~~L~~i~~~---~~vPLVlHGgSG~-~~e~~~~ai~~Gi~ 221 (276)
T cd00947 150 PEEAEEFVEETGVDALAVAIGTSHGAYKGGEPKLDFDRLKEIAER---VNVPLVLHGGSGI-PDEQIRKAIKLGVC 221 (276)
T ss_pred HHHHHHHHHHHCCCEEEeccCccccccCCCCCccCHHHHHHHHHH---hCCCEEEeCCCCC-CHHHHHHHHHcCCe
Confidence 567778887779988776543 333 334555555555444 4899999954432 12234444455543
No 193
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=48.01 E-value=3.4e+02 Score=30.93 Aligned_cols=127 Identities=18% Similarity=0.128 Sum_probs=70.8
Q ss_pred HHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEe
Q psy10113 93 FYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFM 172 (596)
Q Consensus 93 ~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~ 172 (596)
...-.+.+.+.|+..++=+.....-..+..+++..++... ......++. ..+..+.+...++.+.+.+.|+..+-+.-
T Consensus 99 v~~~v~~a~~~Gid~~rifd~lnd~~~~~~ai~~ak~~G~-~~~~~i~yt-~~p~~~~~~~~~~a~~l~~~Gad~i~i~D 176 (593)
T PRK14040 99 VERFVERAVKNGMDVFRVFDAMNDPRNLETALKAVRKVGA-HAQGTLSYT-TSPVHTLQTWVDLAKQLEDMGVDSLCIKD 176 (593)
T ss_pred HHHHHHHHHhcCCCEEEEeeeCCcHHHHHHHHHHHHHcCC-eEEEEEEEe-eCCccCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3445677899999998644222222233344444444322 111111111 12233445555555555567998764332
Q ss_pred ecCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchhhhH-HHHHHHHHcCCCCC
Q psy10113 173 AYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGEIID-KNTQKLLAAGIKGP 224 (596)
Q Consensus 173 ~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~~i~-~~~~~l~~~Gi~~~ 224 (596)
..-.+++.+++++++..++ .++++.+|+.|..-.. ...-..++.|++..
T Consensus 177 ---t~G~l~P~~~~~lv~~lk~~~~~pi~~H~Hnt~GlA~An~laAieAGa~~v 227 (593)
T PRK14040 177 ---MAGLLKPYAAYELVSRIKKRVDVPLHLHCHATTGLSTATLLKAIEAGIDGV 227 (593)
T ss_pred ---CCCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCchHHHHHHHHHHcCCCEE
Confidence 1234788999999988775 5889999987754322 33455667786543
No 194
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=47.39 E-value=3.1e+02 Score=27.58 Aligned_cols=104 Identities=15% Similarity=0.101 Sum_probs=57.9
Q ss_pred HHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCC
Q psy10113 97 TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKG 176 (596)
Q Consensus 97 ~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~ 176 (596)
...+...|+..|+=+.....-+...+.++.+++. +..+.+.+.. ...++.+...++.+.+.+.|+..+.+.-+
T Consensus 88 l~~a~~~gv~~iri~~~~~~~~~~~~~i~~ak~~---G~~v~~~~~~-a~~~~~~~~~~~~~~~~~~g~~~i~l~DT--- 160 (266)
T cd07944 88 LEPASGSVVDMIRVAFHKHEFDEALPLIKAIKEK---GYEVFFNLMA-ISGYSDEELLELLELVNEIKPDVFYIVDS--- 160 (266)
T ss_pred HHHHhcCCcCEEEEecccccHHHHHHHHHHHHHC---CCeEEEEEEe-ecCCCHHHHHHHHHHHHhCCCCEEEEecC---
Confidence 4556778888764222111111222223333222 2223333222 22356666666666566679987654322
Q ss_pred CccCCHHHHHHHHHHHHh-cC--CeEEEecCchh
Q psy10113 177 LYMLSDGELYDAFSAIKN-LG--AIAMVHAENGE 207 (596)
Q Consensus 177 ~~~~~~~~l~~~~~~a~~-~g--~~~~vHae~~~ 207 (596)
.-.+++++++++++..++ ++ +++.+|+.|..
T Consensus 161 ~G~~~P~~v~~lv~~l~~~~~~~~~i~~H~Hn~~ 194 (266)
T cd07944 161 FGSMYPEDIKRIISLLRSNLDKDIKLGFHAHNNL 194 (266)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 235789999999998875 45 89999998754
No 195
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=47.18 E-value=2.3e+02 Score=28.95 Aligned_cols=123 Identities=15% Similarity=0.087 Sum_probs=61.1
Q ss_pred HHHHHHhCCceEEe-ccccCCCCccHHHHHHHHHHHhccC-cee--eeeccccccCC---C---hhHHHHHHHHHHHcCC
Q psy10113 96 GTKAAVAGGTTTII-DFALPRKGESLIKTYESWRQKADEK-VCC--DYALHVGITWW---S---DQVQQEMAELCEKHGV 165 (596)
Q Consensus 96 g~~~al~~GtTti~-D~~~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~---~---~~~~~e~~~lv~~~Gv 165 (596)
..+.|++.|+|+|. |. ...+-+..++..++..+.+... ..+ ..|.-.+.... . -...++..+++++-|+
T Consensus 89 ~i~~Ai~~GftSVM~Dg-S~l~~eeNi~~T~~vve~Ah~~gv~VEaElG~vgg~ed~~~~~~~~~T~pe~a~~Fv~~Tgv 167 (283)
T PRK07998 89 DVKQAVRAGFTSVMIDG-AALPFEENIAFTKEAVDFAKSYGVPVEAELGAILGKEDDHVSEADCKTEPEKVKDFVERTGC 167 (283)
T ss_pred HHHHHHHcCCCEEEEeC-CCCCHHHHHHHHHHHHHHHHHcCCEEEEEeccCCCccccccccccccCCHHHHHHHHHHhCc
Confidence 36678999999994 32 1112222233333333344321 111 12211111100 0 1245677888888899
Q ss_pred CEEEEEee-cCCCc---cCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCC
Q psy10113 166 NSFKTFMA-YKGLY---MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKG 223 (596)
Q Consensus 166 ~~~k~~~~-~~~~~---~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~ 223 (596)
+.+.+..+ -||.+ .++.+.|.++ .+..++++..|--.+-. .+..++..+.|+..
T Consensus 168 D~LAvaiGt~HG~Y~~p~l~~~~l~~I---~~~~~vPLVlHGgSG~~-~e~~~~ai~~Gi~K 225 (283)
T PRK07998 168 DMLAVSIGNVHGLEDIPRIDIPLLKRI---AEVSPVPLVIHGGSGIP-PEILRSFVNYKVAK 225 (283)
T ss_pred CeeehhccccccCCCCCCcCHHHHHHH---HhhCCCCEEEeCCCCCC-HHHHHHHHHcCCcE
Confidence 98876553 23443 3444444444 34469999999654321 23345555555543
No 196
>PRK12999 pyruvate carboxylase; Reviewed
Probab=46.87 E-value=3.1e+02 Score=33.97 Aligned_cols=180 Identities=12% Similarity=0.006 Sum_probs=0.0
Q ss_pred CcchHHHH-HHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccc-------ccCCChhHHHHHHHHH
Q psy10113 89 SVDDFYHG-TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVG-------ITWWSDQVQQEMAELC 160 (596)
Q Consensus 89 ~~d~~~~g-~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~e~~~lv 160 (596)
.+++.... .+.+.+.|+..++=|.....-..+..+++..++. +..+...+... -+.++.+..-++.+.+
T Consensus 624 yp~~v~~~~i~~a~~~Gid~~rifd~lnd~~~~~~~i~~vk~~---g~~~~~~i~ytg~~~d~~~~~~~~~~~~~~a~~l 700 (1146)
T PRK12999 624 YPDNVVRAFVREAAAAGIDVFRIFDSLNWVENMRVAIDAVRET---GKIAEAAICYTGDILDPARAKYDLDYYVDLAKEL 700 (1146)
T ss_pred CCchHHHHHHHHHHHcCCCEEEEeccCChHHHHHHHHHHHHHc---CCeEEEEEEEEecCCCCCCCCCCHHHHHHHHHHH
Q ss_pred HHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc-CCeEEEecCch-hhhHHHHHHHHHcCCCCCCcccCCChHHHHHH
Q psy10113 161 EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL-GAIAMVHAENG-EIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAE 238 (596)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~~~vHae~~-~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~ 238 (596)
.+.|+..+.+-- ..-.+++.+++++++..++. ++++.+|+.+. .......-..++.|++....-...--+...--
T Consensus 701 ~~~Ga~~i~ikD---t~G~l~P~~~~~lv~~lk~~~~ipi~~H~Hnt~Gla~an~laA~~aGad~vD~av~glg~~tgn~ 777 (1146)
T PRK12999 701 EKAGAHILAIKD---MAGLLKPAAAYELVSALKEEVDLPIHLHTHDTSGNGLATYLAAAEAGVDIVDVAVASMSGLTSQP 777 (1146)
T ss_pred HHcCCCEEEECC---ccCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCchHHHHHHHHHHhCCCEEEecchhhcCCcCCH
Q ss_pred HHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHH
Q psy10113 239 AVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKE 274 (596)
Q Consensus 239 a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~ 274 (596)
++...+...+..+...-+-.-.-.+..+.++..|..
T Consensus 778 ~le~vv~~L~~~~~~t~idl~~l~~~s~~~~~~r~~ 813 (1146)
T PRK12999 778 SLNSIVAALEGTERDTGLDLDAIRKLSPYWEAVRPY 813 (1146)
T ss_pred HHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHhH
No 197
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=46.26 E-value=3.4e+02 Score=27.73 Aligned_cols=130 Identities=12% Similarity=0.023 Sum_probs=72.2
Q ss_pred eeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEec------Cch----
Q psy10113 137 CDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHA------ENG---- 206 (596)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHa------e~~---- 206 (596)
+.+.+|.+... ..+.+.+.++ .|.+|+-+ -+-+-.+.-+.+..+++.+.|+..|+.+-.-. |++
T Consensus 78 VPV~lHLDHg~----~~e~i~~ai~-~GftSVM~-DgS~lp~eeNi~~Trevv~~Ah~~gv~VEaElG~igg~ed~~~~~ 151 (285)
T PRK07709 78 VPVAIHLDHGS----SFEKCKEAID-AGFTSVMI-DASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAE 151 (285)
T ss_pred CcEEEECCCCC----CHHHHHHHHH-cCCCEEEE-eCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeccCCccCCcccc
Confidence 45677765543 2445555554 48877632 12111111223347889999999998776542 211
Q ss_pred h----hhHHHHHHHHHcCCCCC------CcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecCcHHHHHHHHHHHHHHh
Q psy10113 207 E----IIDKNTQKLLAAGIKGP------EGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELM 276 (596)
Q Consensus 207 ~----~i~~~~~~l~~~Gi~~~------~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~s~~~~~~i~~a~~~~~ 276 (596)
. -..+..+...+.|++.. .|..+...+.+..+-+ -.+.+..++|+ +.|..|.-..+.++++.+.
T Consensus 152 ~~~yT~peeA~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~L~~~~L---~~I~~~~~iPL-VLHGgSG~~~e~~~~ai~~-- 225 (285)
T PRK07709 152 GVIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEM---EQVRDFTGVPL-VLHGGTGIPTADIEKAISL-- 225 (285)
T ss_pred cccCCCHHHHHHHHHHhCCCEEEEeecccccCcCCCCccCHHHH---HHHHHHHCCCE-EEeCCCCCCHHHHHHHHHc--
Confidence 0 11223344445666532 2333333333444433 33455678998 5598888888888888877
Q ss_pred hcCC
Q psy10113 277 KKGK 280 (596)
Q Consensus 277 ~~G~ 280 (596)
|+
T Consensus 226 --Gi 227 (285)
T PRK07709 226 --GT 227 (285)
T ss_pred --CC
Confidence 87
No 198
>PRK11858 aksA trans-homoaconitate synthase; Reviewed
Probab=46.12 E-value=2.1e+02 Score=30.56 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=50.8
Q ss_pred ccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchhhhH-HHHHHHHHcCCC
Q psy10113 145 ITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGEIID-KNTQKLLAAGIK 222 (596)
Q Consensus 145 ~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~~i~-~~~~~l~~~Gi~ 222 (596)
.+..+.+...++.+.+.+.|+..+.+.-+ .-.+++.++.++++..++ ++.++.+|+.|+.-.. ......++.|++
T Consensus 139 ~~r~~~~~l~~~~~~~~~~Ga~~I~l~DT---~G~~~P~~v~~lv~~l~~~~~~~l~~H~Hnd~GlA~AN~laAv~aGa~ 215 (378)
T PRK11858 139 ASRTDLDFLIEFAKAAEEAGADRVRFCDT---VGILDPFTMYELVKELVEAVDIPIEVHCHNDFGMATANALAGIEAGAK 215 (378)
T ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEecc---CCCCCHHHHHHHHHHHHHhcCCeEEEEecCCcCHHHHHHHHHHHcCCC
Confidence 33445566666666666789987654432 234688999999888765 4889999998764222 234445677766
Q ss_pred CCC
Q psy10113 223 GPE 225 (596)
Q Consensus 223 ~~~ 225 (596)
..+
T Consensus 216 ~vd 218 (378)
T PRK11858 216 QVH 218 (378)
T ss_pred EEE
Confidence 544
No 199
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=45.87 E-value=2e+02 Score=29.44 Aligned_cols=109 Identities=10% Similarity=-0.005 Sum_probs=57.8
Q ss_pred HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc---CCeEEEecCc-hhhhHHHHHHHHHcCCCCCCc--ccCCChHHH
Q psy10113 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN-GEIIDKNTQKLLAAGIKGPEG--HQLSRPEEV 235 (596)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~-~~~i~~~~~~l~~~Gi~~~~~--~~~~~p~~~ 235 (596)
+.|++++-+.-.....+.++.+|-.++++.+.+. ..++.+|+.. .....+..+...+.|+++..- .++..+.+
T Consensus 37 ~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~g~~pvi~gv~~~t~~ai~~a~~a~~~Gadav~~~pP~y~~~s~- 115 (296)
T TIGR03249 37 GYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVSTAKGKVPVYTGVGGNTSDAIEIARLAEKAGADGYLLLPPYLINGEQ- 115 (296)
T ss_pred hcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCccHHHHHHHHHHHHHhCCCEEEECCCCCCCCCH-
Confidence 4688877655444445678888877777765543 3667777532 222233455666777654211 11112221
Q ss_pred HHHHHHHHHHHhcccCCCeEEEecCc-HHHHHHHHHHH
Q psy10113 236 EAEAVTRACTIANQVDCPLYVVHIMS-KAAGDAMAYKR 272 (596)
Q Consensus 236 e~~a~~~~i~la~~~~~p~~i~hv~s-~~~~~~i~~a~ 272 (596)
.+.+..-..++...+.|+.+.+... .-..+.+.++.
T Consensus 116 -~~i~~~f~~v~~a~~~pvilYn~~g~~l~~~~~~~La 152 (296)
T TIGR03249 116 -EGLYAHVEAVCESTDLGVIVYQRDNAVLNADTLERLA 152 (296)
T ss_pred -HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHH
Confidence 1223334445566789988887321 22345555543
No 200
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=45.50 E-value=3.4e+02 Score=27.74 Aligned_cols=118 Identities=18% Similarity=0.187 Sum_probs=60.8
Q ss_pred HHHHHHhCCceEEe-ccccCCCCccHHHHHHH---HHHHhccC-cee--eeeccccccC----CC-h---hHHHHHHHHH
Q psy10113 96 GTKAAVAGGTTTII-DFALPRKGESLIKTYES---WRQKADEK-VCC--DYALHVGITW----WS-D---QVQQEMAELC 160 (596)
Q Consensus 96 g~~~al~~GtTti~-D~~~~~~~~~~~~a~~~---~~~~~~~~-~~~--~~~~~~~~~~----~~-~---~~~~e~~~lv 160 (596)
..+.|++.|+|+|. |. +..++.+.++. ..+.+... ..+ ..|--.+... .. + ...++..+++
T Consensus 89 ~i~~ai~~GftSVM~Dg----S~lp~eeNi~~T~~vv~~Ah~~gvsVEaElG~vgg~e~~~~~~~~~~~~T~pe~a~~Fv 164 (284)
T PRK12857 89 QVMKCIRNGFTSVMIDG----SKLPLEENIALTKKVVEIAHAVGVSVEAELGKIGGTEDDITVDEREAAMTDPEEARRFV 164 (284)
T ss_pred HHHHHHHcCCCeEEEeC----CCCCHHHHHHHHHHHHHHHHHcCCEEEEEeeecCCccCCCCcccchhhcCCHHHHHHHH
Confidence 36788999999994 32 22344444443 33334321 111 1111111100 11 1 1345677777
Q ss_pred HHcCCCEEEEEee-----cCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCC
Q psy10113 161 EKHGVNSFKTFMA-----YKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGI 221 (596)
Q Consensus 161 ~~~Gv~~~k~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi 221 (596)
++-|++.+-+..+ |++.+.++.+.|.++-+ ..+.++..|--.+- -.+..+++.+.|+
T Consensus 165 ~~TgvD~LAvaiGt~HG~y~~~p~Ld~~~L~~i~~---~~~vPLVlHGgSG~-~~e~~~~ai~~Gi 226 (284)
T PRK12857 165 EETGVDALAIAIGTAHGPYKGEPKLDFDRLAKIKE---LVNIPIVLHGSSGV-PDEAIRKAISLGV 226 (284)
T ss_pred HHHCCCEEeeccCccccccCCCCcCCHHHHHHHHH---HhCCCEEEeCCCCC-CHHHHHHHHHcCC
Confidence 7779988776553 44444566666666644 34899999954432 1223444444443
No 201
>TIGR03822 AblA_like_2 lysine-2,3-aminomutase-related protein. Members of this protein form a distinctive clade, homologous to lysine-2,3-aminomutase (of Bacillus, Clostridium, and methanogenic archaea) and likely similar in function. Members of this family are found in Rhodopseudomonas, Caulobacter crescentus, Bradyrhizobium, etc.
Probab=45.15 E-value=3e+02 Score=28.54 Aligned_cols=81 Identities=14% Similarity=0.188 Sum_probs=42.8
Q ss_pred ccCCHHHHHHHHHHHHhcCCe--EEEecC----chhhh-HHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhccc
Q psy10113 178 YMLSDGELYDAFSAIKNLGAI--AMVHAE----NGEII-DKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQV 250 (596)
Q Consensus 178 ~~~~~~~l~~~~~~a~~~g~~--~~vHae----~~~~i-~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~ 250 (596)
...++..|.++++.+++.+.. +.+|.. +...+ .+..+.+.+.|....-+....++.++ .+.+.+++......
T Consensus 148 l~~~~~~L~~ll~~l~~i~~v~~iri~Tr~~v~~p~rit~ell~~L~~~g~~v~i~l~~~h~~el-~~~~~~ai~~L~~~ 226 (321)
T TIGR03822 148 LVLSPRRLGDIMARLAAIDHVKIVRFHTRVPVADPARVTPALIAALKTSGKTVYVALHANHAREL-TAEARAACARLIDA 226 (321)
T ss_pred ccCCHHHHHHHHHHHHhCCCccEEEEeCCCcccChhhcCHHHHHHHHHcCCcEEEEecCCChhhc-CHHHHHHHHHHHHc
Confidence 344567777777777776532 345542 22222 23344455556332112222234444 25566778888888
Q ss_pred CCCeEEEec
Q psy10113 251 DCPLYVVHI 259 (596)
Q Consensus 251 ~~p~~i~hv 259 (596)
|+++.+..+
T Consensus 227 Gi~v~~q~v 235 (321)
T TIGR03822 227 GIPMVSQSV 235 (321)
T ss_pred CCEEEEEee
Confidence 888765443
No 202
>TIGR01235 pyruv_carbox pyruvate carboxylase. This enzyme plays a role in gluconeogensis but not glycolysis.
Probab=43.54 E-value=4.3e+02 Score=32.69 Aligned_cols=132 Identities=14% Similarity=0.036 Sum_probs=76.6
Q ss_pred cch-HHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc-----cccCCChhHHHHHHHHHHHc
Q psy10113 90 VDD-FYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV-----GITWWSDQVQQEMAELCEKH 163 (596)
Q Consensus 90 ~d~-~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~e~~~lv~~~ 163 (596)
+|+ ++...+.+.+.|+..++=|-.-..-..+..+++..++... .......+.. .-+.++.+..-++.+.+.+.
T Consensus 623 pd~vv~~f~~~~~~~GidifrifD~lN~~~n~~~~~~~~~~~g~-~~~~~i~yt~~~~d~~~~~~~l~y~~~~ak~l~~~ 701 (1143)
T TIGR01235 623 PDNVVKYFVKQAAQGGIDIFRVFDSLNWVENMRVGMDAVAEAGK-VVEAAICYTGDILDPARPKYDLKYYTNLAVELEKA 701 (1143)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccCcCHHHHHHHHHHHHHcCC-EEEEEEEEeccCCCcCCCCCCHHHHHHHHHHHHHc
Confidence 444 3456778899999999755333333345555555554432 1211222211 12344555555666555667
Q ss_pred CCCEEEEEeecCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchhhh-HHHHHHHHHcCCCCCC
Q psy10113 164 GVNSFKTFMAYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGEII-DKNTQKLLAAGIKGPE 225 (596)
Q Consensus 164 Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~~i-~~~~~~l~~~Gi~~~~ 225 (596)
|+..+-+- + ..-.+++..++++++..++ .++++.+|+.+..-. ....-..++.|++...
T Consensus 702 Gad~I~ik-D--t~Gll~P~~~~~Lv~~lk~~~~~pi~~H~Hdt~Gla~an~laA~eaGad~vD 762 (1143)
T TIGR01235 702 GAHILGIK-D--MAGLLKPAAAKLLIKALREKTDLPIHFHTHDTSGIAVASMLAAVEAGVDVVD 762 (1143)
T ss_pred CCCEEEEC-C--CcCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCCcHHHHHHHHHHhCCCEEE
Confidence 99866432 1 2235788899999888775 589999998765322 2334456688876543
No 203
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=42.86 E-value=4.6e+02 Score=28.24 Aligned_cols=50 Identities=28% Similarity=0.416 Sum_probs=31.0
Q ss_pred cCCCEEeeCccccccCCCccc----------------cCCCCcchHHHHHHHHHhCCceEEeccccC
Q psy10113 64 AAGSYVIPGGIDPHTHFELEL----------------MGATSVDDFYHGTKAAVAGGTTTIIDFALP 114 (596)
Q Consensus 64 a~G~~V~PG~ID~HtHl~~~~----------------~~~~~~d~~~~g~~~al~~GtTti~D~~~~ 114 (596)
|.|++|+|.=++ |..+.--. ....+.+.-..-.+.|++.|.-||.|....
T Consensus 35 A~G~iVIp~N~~-h~~~~p~~IG~gl~tKVNaNIGtS~~~~d~~~E~~K~~~A~~~GADtiMDLStg 100 (431)
T PRK13352 35 AEGRIVIPANIN-HKNLKPVGIGKGLRTKVNANIGTSSDISDIEEELEKAKVAVKYGADTIMDLSTG 100 (431)
T ss_pred hCceEEEecCCC-CCCCCeeEEcCCceeEEeeeecCCCCCCCHHHHHHHHHHHHHcCCCeEeeccCC
Confidence 789999998887 66542100 011122222234678899999999998443
No 204
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=42.84 E-value=1.6e+02 Score=29.87 Aligned_cols=127 Identities=10% Similarity=0.087 Sum_probs=0.0
Q ss_pred eeCccccccCCCccccCCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCC
Q psy10113 70 IPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWS 149 (596)
Q Consensus 70 ~PG~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (596)
|||.+ +-.-..+.- +..+.+.+..-....+..|+.-+ ++.+..|+...=..++.++..+.-....-...+++...+
T Consensus 1 ~~~v~-~a~~TPf~~-g~iD~~~~~~li~~l~~~Gv~Gl--~~~GstGE~~~Lt~eEr~~l~~~~~~~~~~vi~gvg~~~ 76 (279)
T cd00953 1 MPDKI-TPVITPFTG-NKIDKEKFKKHCENLISKGIDYV--FVAGTTGLGPSLSFQEKLELLKAYSDITDKVIFQVGSLN 76 (279)
T ss_pred CCCcc-cceecCcCC-CCcCHHHHHHHHHHHHHcCCcEE--EEcccCCCcccCCHHHHHHHHHHHHHHcCCEEEEeCcCC
Q ss_pred hhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEe
Q psy10113 150 DQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVH 202 (596)
Q Consensus 150 ~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vH 202 (596)
....-++.+.+++.|++.+-+...|-... .+++++.+-++...+ ++++.+.
T Consensus 77 ~~~ai~~a~~a~~~Gad~v~v~~P~y~~~-~~~~~i~~yf~~v~~-~lpv~iY 127 (279)
T cd00953 77 LEESIELARAAKSFGIYAIASLPPYYFPG-IPEEWLIKYFTDISS-PYPTFIY 127 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcCCCC-CCHHHHHHHHHHHHh-cCCEEEE
No 205
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=42.65 E-value=2.4e+02 Score=28.98 Aligned_cols=109 Identities=13% Similarity=0.044 Sum_probs=58.1
Q ss_pred HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc---CCeEEEecC-chhhhHHHHHHHHHcCCCCCCc--ccCCChHHH
Q psy10113 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE-NGEIIDKNTQKLLAAGIKGPEG--HQLSRPEEV 235 (596)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae-~~~~i~~~~~~l~~~Gi~~~~~--~~~~~p~~~ 235 (596)
+.|++++-+.-+......++.+|-.++++.+.+. .+++.++.. +.....+..+...+.|+++..- .++..+.+-
T Consensus 39 ~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~t~~~i~~~~~a~~~Gadav~~~pP~y~~~~~~ 118 (303)
T PRK03620 39 PYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIAGAGGGTAQAIEYAQAAERAGADGILLLPPYLTEAPQE 118 (303)
T ss_pred HcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCHH
Confidence 4688877554444444567888877777655432 356666653 2223334456667777654211 012222222
Q ss_pred HHHHHHHHHHHhcccCCCeEEEecCc-HHHHHHHHHHH
Q psy10113 236 EAEAVTRACTIANQVDCPLYVVHIMS-KAAGDAMAYKR 272 (596)
Q Consensus 236 e~~a~~~~i~la~~~~~p~~i~hv~s-~~~~~~i~~a~ 272 (596)
+....-..++...+.|+.+.+... .-..+.+.+..
T Consensus 119 --~i~~~f~~va~~~~lpi~lYn~~g~~l~~~~l~~L~ 154 (303)
T PRK03620 119 --GLAAHVEAVCKSTDLGVIVYNRDNAVLTADTLARLA 154 (303)
T ss_pred --HHHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHH
Confidence 222333445666789998887442 22345555554
No 206
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=42.25 E-value=2.4e+02 Score=28.78 Aligned_cols=97 Identities=14% Similarity=-0.011 Sum_probs=50.6
Q ss_pred HcC-CCEEEEEeecCCCccCCHHHHHHHHHHHHhc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCCc--ccCCChH
Q psy10113 162 KHG-VNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPEG--HQLSRPE 233 (596)
Q Consensus 162 ~~G-v~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~l~~~Gi~~~~~--~~~~~p~ 233 (596)
+.| ++++-+.-+......++.+|-.++++.+.+. .+++.+++. +.....+..+...+.|+++.-- ..+..+.
T Consensus 32 ~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~~t~~~i~la~~a~~~Gad~v~v~~P~y~~~~ 111 (290)
T TIGR00683 32 DKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFS 111 (290)
T ss_pred hCCCcCEEEECCcccccccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHHhCCCEEEEeCCcCCCCC
Confidence 457 7776544333334567887777776655543 356666653 3333444556666777654221 1111222
Q ss_pred HHHHHHHHHHHHHhccc-CCCeEEEecC
Q psy10113 234 EVEAEAVTRACTIANQV-DCPLYVVHIM 260 (596)
Q Consensus 234 ~~e~~a~~~~i~la~~~-~~p~~i~hv~ 260 (596)
+ .+.+..-..++... +.|+.+.+.-
T Consensus 112 ~--~~i~~yf~~v~~~~~~lpv~lYn~P 137 (290)
T TIGR00683 112 F--PEIKHYYDTIIAETGGLNMIVYSIP 137 (290)
T ss_pred H--HHHHHHHHHHHhhCCCCCEEEEeCc
Confidence 2 12233333444445 6898888765
No 207
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=41.72 E-value=5.8e+02 Score=29.03 Aligned_cols=159 Identities=16% Similarity=0.169 Sum_probs=94.2
Q ss_pred CCCcchHHHHHHHHHhCCceEEeccc--------cCCCCccHHHHHHHHHHHhccCceeeeec----cccccCCChhHHH
Q psy10113 87 ATSVDDFYHGTKAAVAGGTTTIIDFA--------LPRKGESLIKTYESWRQKADEKVCCDYAL----HVGITWWSDQVQQ 154 (596)
Q Consensus 87 ~~~~d~~~~g~~~al~~GtTti~D~~--------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 154 (596)
.+..++...-+..+.+.|+..|- +. ..-..+...+.++.+++... +...-..+ ..+.....+++.+
T Consensus 17 ~~~t~dkl~ia~~L~~~Gv~~IE-~~GGatfd~~~~f~~e~~~e~l~~l~~~~~-~~~l~~L~Rg~N~~G~~~ypddvv~ 94 (582)
T TIGR01108 17 RMRTEDMLPIAEKLDDVGYWSLE-VWGGATFDACIRFLNEDPWERLRELKKALP-NTPLQMLLRGQNLLGYRHYADDVVE 94 (582)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEE-ecCCcccccccccCCCCHHHHHHHHHHhCC-CCEEEEEEccccccccccCchhhHH
Confidence 45667777777777888988873 21 11223445566666655432 22221111 1234455666666
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEe---cC----chhhhHHHHHHHHHcCCCCCC--
Q psy10113 155 EMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVH---AE----NGEIIDKNTQKLLAAGIKGPE-- 225 (596)
Q Consensus 155 e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vH---ae----~~~~i~~~~~~l~~~Gi~~~~-- 225 (596)
+.-+...+.|+..|.+|..... ...+...++.+++.|..+.+- .. +.+...+..+.+.+.|.....
T Consensus 95 ~~v~~a~~~Gvd~irif~~lnd-----~~n~~~~i~~ak~~G~~v~~~i~~t~~p~~~~~~~~~~~~~~~~~Gad~I~i~ 169 (582)
T TIGR01108 95 RFVKKAVENGMDVFRIFDALND-----PRNLQAAIQAAKKHGAHAQGTISYTTSPVHTLETYLDLAEELLEMGVDSICIK 169 (582)
T ss_pred HHHHHHHHCCCCEEEEEEecCc-----HHHHHHHHHHHHHcCCEEEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 5555555679999999976432 357888999999999887753 11 335556677888888876532
Q ss_pred -cccCCChHHHHHHHHHHHHHHhcccCCCeEE
Q psy10113 226 -GHQLSRPEEVEAEAVTRACTIANQVDCPLYV 256 (596)
Q Consensus 226 -~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i 256 (596)
.--+..|..+. +.+.+. .+..+.|+++
T Consensus 170 Dt~G~~~P~~v~-~lv~~l---k~~~~~pi~~ 197 (582)
T TIGR01108 170 DMAGILTPKAAY-ELVSAL---KKRFGLPVHL 197 (582)
T ss_pred CCCCCcCHHHHH-HHHHHH---HHhCCCceEE
Confidence 22345676653 222222 2334677765
No 208
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=41.69 E-value=2.4e+02 Score=28.73 Aligned_cols=96 Identities=13% Similarity=0.069 Sum_probs=53.7
Q ss_pred cCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCCc--ccCCChHHH
Q psy10113 163 HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPEG--HQLSRPEEV 235 (596)
Q Consensus 163 ~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~l~~~Gi~~~~~--~~~~~p~~~ 235 (596)
.|++++-+.-.......++.+|-.++++.+.+. .+++.+++. +.....+..+.+.+.|+++..- ..+..+.+-
T Consensus 37 ~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~~~~~~~viagvg~~~t~~ai~~a~~a~~~Gad~v~v~~P~y~~~~~~ 116 (293)
T PRK04147 37 QGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAKGKVKLIAQVGSVNTAEAQELAKYATELGYDAISAVTPFYYPFSFE 116 (293)
T ss_pred CCCCEEEECCCccccccCCHHHHHHHHHHHHHHhCCCCCEEecCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcCCCCCHH
Confidence 688877554433344567888877776655542 356666653 3344445566777777655221 111222221
Q ss_pred HHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 236 EAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 236 e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
+.+..-..++...+.|+.+.+.-
T Consensus 117 --~l~~~f~~va~a~~lPv~iYn~P 139 (293)
T PRK04147 117 --EICDYYREIIDSADNPMIVYNIP 139 (293)
T ss_pred --HHHHHHHHHHHhCCCCEEEEeCc
Confidence 22333444566678999998764
No 209
>PRK08508 biotin synthase; Provisional
Probab=41.53 E-value=2.2e+02 Score=28.85 Aligned_cols=75 Identities=23% Similarity=0.110 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCc
Q psy10113 151 QVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEG 226 (596)
Q Consensus 151 ~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~ 226 (596)
++.+.+.+. .+.|+..|-+..+-.+......+.+.++++.+++.+..+.+|+.++....+..++|.+.|++.-.+
T Consensus 44 eI~~~a~~a-~~~g~~~~~lv~sg~~~~~~~~e~~~ei~~~ik~~~p~l~i~~s~G~~~~e~l~~Lk~aGld~~~~ 118 (279)
T PRK08508 44 QIVQEAKMA-KANGALGFCLVTSGRGLDDKKLEYVAEAAKAVKKEVPGLHLIACNGTASVEQLKELKKAGIFSYNH 118 (279)
T ss_pred HHHHHHHHH-HHCCCCEEEEEeccCCCCcccHHHHHHHHHHHHhhCCCcEEEecCCCCCHHHHHHHHHcCCCEEcc
Confidence 334443333 335887765532222222235567788888888776666778777777788888999999876544
No 210
>PF02811 PHP: PHP domain; InterPro: IPR004013 The PHP (Polymerase and Histidinol Phosphatase) domain is a putative phosphoesterase domain. This family is often associated with an N-terminal region IPR003141 from INTERPRO.; GO: 0003824 catalytic activity; PDB: 2WJE_A 3QY8_A 2WJD_A 2WJF_A 1PB0_B 1M68_A 1M65_A 3E38_B 2W9M_A 3E0F_A ....
Probab=41.51 E-value=19 Score=33.13 Aligned_cols=35 Identities=31% Similarity=0.477 Sum_probs=23.9
Q ss_pred cccccCCCcc-ccCCCCcchHHHHHHHHHhCCceEEe--cc
Q psy10113 74 IDPHTHFELE-LMGATSVDDFYHGTKAAVAGGTTTII--DF 111 (596)
Q Consensus 74 ID~HtHl~~~-~~~~~~~d~~~~g~~~al~~GtTti~--D~ 111 (596)
||.|+|.... ..+..+.+++ .+.|.+.|.+++. |+
T Consensus 1 iDlH~HT~~s~~dg~~~~~e~---v~~A~~~Gl~~i~iTDH 38 (175)
T PF02811_consen 1 IDLHVHTKYSILDGKDSPEEY---VEQAKEKGLDAIAITDH 38 (175)
T ss_dssp EEEEB--TTTSSTSSSSHHHH---HHHHHHTTESEEEEEEE
T ss_pred CCccccccCcchhhcCCHHHH---HHHHHHcCCCEEEEcCC
Confidence 7999999776 4455555555 6889999999873 55
No 211
>cd07943 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain. 4-hydroxy 2-ketovalerate aldolase (Also known as 4-hydroxy-2-ketovalerate aldolase and 4-hydroxy-2-oxopentanoate aldolase (HOA)) converts 4-hydroxy-2-oxopentanoate to acetaldehyde and pyruvate, the penultimate step in the meta-cleavage pathway for the degradation of phenols, cresols and catechol. This family includes the Escherichia coli MhpE aldolase, the Pseudomonas DmpG aldolase, and the Burkholderia xenovorans BphI pyruvate aldolase. In Pseudomonas, the DmpG aldolase tightly associates with a dehydrogenase (DmpF ) and is inactive without it. HOA has a canonical TIM-barrel fold with a C-terminal extension that forms a funnel leading to the active site. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate
Probab=41.44 E-value=3.8e+02 Score=26.81 Aligned_cols=105 Identities=14% Similarity=0.015 Sum_probs=59.0
Q ss_pred HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecC
Q psy10113 96 GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYK 175 (596)
Q Consensus 96 g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~ 175 (596)
....+++.|+..+.=+...+......+.++..++. +..+...+. ....++++...++.+.+.+.|+..+.+--
T Consensus 90 ~i~~a~~~g~~~iri~~~~s~~~~~~~~i~~ak~~---G~~v~~~~~-~~~~~~~~~~~~~~~~~~~~G~d~i~l~D--- 162 (263)
T cd07943 90 DLKMAADLGVDVVRVATHCTEADVSEQHIGAARKL---GMDVVGFLM-MSHMASPEELAEQAKLMESYGADCVYVTD--- 162 (263)
T ss_pred HHHHHHHcCCCEEEEEechhhHHHHHHHHHHHHHC---CCeEEEEEE-eccCCCHHHHHHHHHHHHHcCCCEEEEcC---
Confidence 35667888988875222111111222333333332 222222221 23445666566666666667988764321
Q ss_pred CCccCCHHHHHHHHHHHHh-cCC-eEEEecCchh
Q psy10113 176 GLYMLSDGELYDAFSAIKN-LGA-IAMVHAENGE 207 (596)
Q Consensus 176 ~~~~~~~~~l~~~~~~a~~-~g~-~~~vHae~~~ 207 (596)
..-.++++++.++++..++ .+. ++.+|+.|..
T Consensus 163 T~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hn~~ 196 (263)
T cd07943 163 SAGAMLPDDVRERVRALREALDPTPVGFHGHNNL 196 (263)
T ss_pred CCCCcCHHHHHHHHHHHHHhCCCceEEEEecCCc
Confidence 2335789999999998876 465 8999988754
No 212
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=40.94 E-value=5.3e+02 Score=28.41 Aligned_cols=171 Identities=16% Similarity=0.208 Sum_probs=101.6
Q ss_pred ccccccCCCccccCCCCcchHHHHHHHHHhCCceEEe-------ccccCCCCccHHHHHHHHHHHhccCceeeeecc---
Q psy10113 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTII-------DFALPRKGESLIKTYESWRQKADEKVCCDYALH--- 142 (596)
Q Consensus 73 ~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~-------D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~--- 142 (596)
|-|.|--+ +...+..+++...+..+-+.|+-++- |....-..++..+.++.+++.... ...-..+.
T Consensus 20 lRDg~QSl---~atr~~t~d~l~ia~~ld~~G~~siE~wGGAtfd~~~rfl~edpwerlr~~r~~~~n-t~lqmLlRG~n 95 (468)
T PRK12581 20 LRDGHQSL---MATRLSIEDMLPVLTILDKIGYYSLECWGGATFDACIRFLNEDPWERLRTLKKGLPN-TRLQMLLRGQN 95 (468)
T ss_pred ccchhhhc---cccCCCHHHHHHHHHHHHhcCCCEEEecCCcchhhhhcccCCCHHHHHHHHHHhCCC-Cceeeeecccc
Confidence 55666443 22346677777767766677777763 111122335566677777776643 22221111
Q ss_pred -ccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEe---c----CchhhhHHHHH
Q psy10113 143 -VGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVH---A----ENGEIIDKNTQ 214 (596)
Q Consensus 143 -~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vH---a----e~~~~i~~~~~ 214 (596)
++...+.+++.+..-+...+.|+..|.+|-.. -..+.+...++.+++.|..+.+- . .+.+...+..+
T Consensus 96 ~vgy~~ypddvv~~fv~~a~~~Gidi~Rifd~l-----nd~~n~~~ai~~ak~~G~~~~~~i~yt~sp~~t~~y~~~~a~ 170 (468)
T PRK12581 96 LLGYRHYADDIVDKFISLSAQNGIDVFRIFDAL-----NDPRNIQQALRAVKKTGKEAQLCIAYTTSPVHTLNYYLSLVK 170 (468)
T ss_pred ccCccCCcchHHHHHHHHHHHCCCCEEEEcccC-----CCHHHHHHHHHHHHHcCCEEEEEEEEEeCCcCcHHHHHHHHH
Confidence 34556667888877777778899999998642 25567889999999999875432 1 12334556677
Q ss_pred HHHHcCCCCCC---cccCCChHHHHHHHHHHHHHHhcccCCCeEE
Q psy10113 215 KLLAAGIKGPE---GHQLSRPEEVEAEAVTRACTIANQVDCPLYV 256 (596)
Q Consensus 215 ~l~~~Gi~~~~---~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i 256 (596)
.+.+.|+.... ---...|..+. +-+ +++. +..+.|+++
T Consensus 171 ~l~~~Gad~I~IkDtaG~l~P~~v~-~Lv-~alk--~~~~~pi~~ 211 (468)
T PRK12581 171 ELVEMGADSICIKDMAGILTPKAAK-ELV-SGIK--AMTNLPLIV 211 (468)
T ss_pred HHHHcCCCEEEECCCCCCcCHHHHH-HHH-HHHH--hccCCeEEE
Confidence 88888876432 22345566553 222 3322 245677765
No 213
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=40.11 E-value=3.3e+02 Score=27.76 Aligned_cols=122 Identities=19% Similarity=0.157 Sum_probs=61.9
Q ss_pred HHHHHHhCCceEEe-ccccCCCCccHHHHHHHHHHHhccC-cee--eeeccccccCC-------ChhHHHHHHHHHHHcC
Q psy10113 96 GTKAAVAGGTTTII-DFALPRKGESLIKTYESWRQKADEK-VCC--DYALHVGITWW-------SDQVQQEMAELCEKHG 164 (596)
Q Consensus 96 g~~~al~~GtTti~-D~~~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~-------~~~~~~e~~~lv~~~G 164 (596)
-.+.|+++|+|+|. |. ...+.+...+.-++..+.+... ..+ +.+ |++.... +-...++..++++.-|
T Consensus 89 ~i~~Al~~G~tsVm~d~-s~~~~~eni~~t~~v~~~a~~~gv~veaE~g-hlG~~d~~~~~~g~s~t~~eea~~f~~~tg 166 (281)
T PRK06806 89 KIKEALEIGFTSVMFDG-SHLPLEENIQKTKEIVELAKQYGATVEAEIG-RVGGSEDGSEDIEMLLTSTTEAKRFAEETD 166 (281)
T ss_pred HHHHHHHcCCCEEEEcC-CCCCHHHHHHHHHHHHHHHHHcCCeEEEEee-eECCccCCcccccceeCCHHHHHHHHHhhC
Confidence 46789999999994 22 1112223333333444444332 111 222 4441111 1123456666665569
Q ss_pred CCEEEEEe-----ecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCC
Q psy10113 165 VNSFKTFM-----AYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKG 223 (596)
Q Consensus 165 v~~~k~~~-----~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~ 223 (596)
++.+-+.. .|++...+..+.|.++. +..++++..|-..+ +-.+...++.+.|+..
T Consensus 167 ~DyLAvaiG~~hg~~~~~~~l~~~~L~~i~---~~~~iPlV~hG~SG-I~~e~~~~~i~~G~~k 226 (281)
T PRK06806 167 VDALAVAIGNAHGMYNGDPNLRFDRLQEIN---DVVHIPLVLHGGSG-ISPEDFKKCIQHGIRK 226 (281)
T ss_pred CCEEEEccCCCCCCCCCCCccCHHHHHHHH---HhcCCCEEEECCCC-CCHHHHHHHHHcCCcE
Confidence 98877622 22222334444454444 44589999995332 2234556666777655
No 214
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=40.03 E-value=3e+02 Score=27.95 Aligned_cols=97 Identities=13% Similarity=0.053 Sum_probs=53.7
Q ss_pred Hc-CCCEEEEEeecCCCccCCHHHHHHHHHHHHhc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCC--cccCCChH
Q psy10113 162 KH-GVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSRPE 233 (596)
Q Consensus 162 ~~-Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~l~~~Gi~~~~--~~~~~~p~ 233 (596)
+. |++++-+.-.-.....++.+|-.++++.+.+. .+++.+++. +.....+..+.+.+.|.++.- -..+..+.
T Consensus 32 ~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~viagv~~~~~~~ai~~a~~a~~~Gad~v~~~~P~y~~~~ 111 (288)
T cd00954 32 EKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIAHVGSLNLKESQELAKHAEELGYDAISAITPFYYKFS 111 (288)
T ss_pred hcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEeccCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCCC
Confidence 46 88876554443344567888877776655542 356666653 334445556677777765522 01112222
Q ss_pred HHHHHHHHHHHHHhccc-CCCeEEEecC
Q psy10113 234 EVEAEAVTRACTIANQV-DCPLYVVHIM 260 (596)
Q Consensus 234 ~~e~~a~~~~i~la~~~-~~p~~i~hv~ 260 (596)
+- +.+..-..++... +.|+.+.+.-
T Consensus 112 ~~--~i~~~~~~v~~a~~~lpi~iYn~P 137 (288)
T cd00954 112 FE--EIKDYYREIIAAAASLPMIIYHIP 137 (288)
T ss_pred HH--HHHHHHHHHHHhcCCCCEEEEeCc
Confidence 22 2233344456667 8999987754
No 215
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=39.81 E-value=2.7e+02 Score=28.45 Aligned_cols=109 Identities=17% Similarity=0.066 Sum_probs=59.6
Q ss_pred HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHh---cCCeEEEecC--chhhhHHHHHHHHHcCCCCCCc--ccCCChHH
Q psy10113 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKN---LGAIAMVHAE--NGEIIDKNTQKLLAAGIKGPEG--HQLSRPEE 234 (596)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~~~vHae--~~~~i~~~~~~l~~~Gi~~~~~--~~~~~p~~ 234 (596)
+.|++++-+.-.......++.+|-.++++.+.+ -..++.+|+. +.....+..+...+.|.++.-- .++..|.+
T Consensus 32 ~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~~~~g~~pvi~gv~~~~t~~ai~~a~~A~~~Gad~v~v~pP~y~~~~~ 111 (294)
T TIGR02313 32 EGGSHAISVGGTSGEPGSLTLEERKQAIENAIDQIAGRIPFAPGTGALNHDETLELTKFAEEAGADAAMVIVPYYNKPNQ 111 (294)
T ss_pred HcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCCCCcEEEECCcchHHHHHHHHHHHHHcCCCEEEEcCccCCCCCH
Confidence 468887654433334456788887777665443 2366777753 3333444556667777654221 11222332
Q ss_pred HHHHHHHHHHHHhccc-CCCeEEEecCcH----HHHHHHHHHH
Q psy10113 235 VEAEAVTRACTIANQV-DCPLYVVHIMSK----AAGDAMAYKR 272 (596)
Q Consensus 235 ~e~~a~~~~i~la~~~-~~p~~i~hv~s~----~~~~~i~~a~ 272 (596)
- +.+..-..++... +.|+.+.+.-.. -..+.+.++.
T Consensus 112 ~--~l~~~f~~ia~a~~~lpv~iYn~P~~tg~~l~~~~l~~L~ 152 (294)
T TIGR02313 112 E--ALYDHFAEVADAVPDFPIIIYNIPGRAAQEIAPKTMARLR 152 (294)
T ss_pred H--HHHHHHHHHHHhccCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 2 2233344456667 899998876422 2345666554
No 216
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=38.79 E-value=1.6e+02 Score=29.28 Aligned_cols=11 Identities=36% Similarity=0.495 Sum_probs=7.8
Q ss_pred hCCceEEeccc
Q psy10113 102 AGGTTTIIDFA 112 (596)
Q Consensus 102 ~~GtTti~D~~ 112 (596)
..|.|+|+|-.
T Consensus 11 ~~GlT~v~Dkg 21 (244)
T PF02679_consen 11 SRGLTMVIDKG 21 (244)
T ss_dssp SSS-EEEEESS
T ss_pred CCCcEEEecCC
Confidence 37999998875
No 217
>PRK15447 putative protease; Provisional
Probab=38.71 E-value=2.9e+02 Score=28.42 Aligned_cols=56 Identities=9% Similarity=0.184 Sum_probs=40.1
Q ss_pred cCCChhHHHHHHHHHHHcCCCEEEEEeecCCC---ccCCHHHHHHHHHHHHhcCCeEEEec
Q psy10113 146 TWWSDQVQQEMAELCEKHGVNSFKTFMAYKGL---YMLSDGELYDAFSAIKNLGAIAMVHA 203 (596)
Q Consensus 146 ~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~---~~~~~~~l~~~~~~a~~~g~~~~vHa 203 (596)
-+|+....+.+-..+.+.|++.+- ++.... ...+.+++.++++.+++.|..+.+-.
T Consensus 10 ~~~p~~~~~~~~~~~~~~gaDaVY--~g~~~~~~R~~f~~~~l~e~v~~~~~~gkkvyva~ 68 (301)
T PRK15447 10 YYWPKETVRDFYQRAADSPVDIVY--LGETVCSKRRELKVGDWLELAERLAAAGKEVVLST 68 (301)
T ss_pred cCCCCCCHHHHHHHHHcCCCCEEE--ECCccCCCccCCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 367777777777777777888654 332211 13788999999999999998887743
No 218
>TIGR00167 cbbA ketose-bisphosphate aldolases. fructose-bisphosphate and tagatose-bisphosphate aldolase.
Probab=38.14 E-value=4.6e+02 Score=26.85 Aligned_cols=120 Identities=20% Similarity=0.246 Sum_probs=61.5
Q ss_pred HHHHHHHhCCceEEe-ccccCCCCccHHHHHHHH---HHHhccC-cee--eeeccccccC----CC-h---hHHHHHHHH
Q psy10113 95 HGTKAAVAGGTTTII-DFALPRKGESLIKTYESW---RQKADEK-VCC--DYALHVGITW----WS-D---QVQQEMAEL 159 (596)
Q Consensus 95 ~g~~~al~~GtTti~-D~~~~~~~~~~~~a~~~~---~~~~~~~-~~~--~~~~~~~~~~----~~-~---~~~~e~~~l 159 (596)
...+.|++.|+|+|. |. +..++.+.++.. .+.+... ..+ ..|.-.+... .. + ...++..++
T Consensus 91 e~i~~ai~~GftSVMiDg----S~lp~eeNi~~T~~vv~~Ah~~gv~VEaElG~vgg~e~~~~~~~~~~~~T~peea~~F 166 (288)
T TIGR00167 91 EDCAQAVKAGFSSVMIDG----SHEPFEENIELTKKVVERAHKMGVSVEAELGTLGGEEDGVSVADESALYTDPEEAKEF 166 (288)
T ss_pred HHHHHHHHcCCCEEEecC----CCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCcccccccccCCCHHHHHHH
Confidence 337788999999994 32 223444444433 3333321 111 1111111111 01 0 134677888
Q ss_pred HHHcCCCEEEEEee-cCCCc----c-CCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCC
Q psy10113 160 CEKHGVNSFKTFMA-YKGLY----M-LSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIK 222 (596)
Q Consensus 160 v~~~Gv~~~k~~~~-~~~~~----~-~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~ 222 (596)
+++-|++.+-+..+ -||.+ . ++.+.|.++- +..+.++..|--.+- -.+..+++...|+.
T Consensus 167 v~~TgvD~LAvaiGt~HG~y~~~p~~Ld~~~L~~I~---~~v~vPLVlHGgSG~-~~e~~~~ai~~Gi~ 231 (288)
T TIGR00167 167 VKLTGVDSLAAAIGNVHGVYKGEPKGLDFERLEEIQ---KYVNLPLVLHGGSGI-PDEEIKKAISLGVV 231 (288)
T ss_pred HhccCCcEEeeccCccccccCCCCCccCHHHHHHHH---HHhCCCEEEeCCCCC-CHHHHHHHHHcCCe
Confidence 87779998876653 33443 3 4555555553 345899999965432 12234444455543
No 219
>TIGR01859 fruc_bis_ald_ fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist. This model represents of one of several subtypes of the class II fructose-1,6-bisphosphate aldolase, an enzyme of glycolysis. The subtypes are split into several models to allow separation of a family of tagatose bisphosphate aldolases. This form is found in Gram-positive bacteria, a variety of Gram-negative, and in amitochondriate protists. The class II enzymes share homology with tagatose bisphosphate aldolase but not with class I aldolase.
Probab=38.06 E-value=3.3e+02 Score=27.72 Aligned_cols=68 Identities=21% Similarity=0.284 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHcCCCEEEEEe-----ecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCC
Q psy10113 152 VQQEMAELCEKHGVNSFKTFM-----AYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKG 223 (596)
Q Consensus 152 ~~~e~~~lv~~~Gv~~~k~~~-----~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~ 223 (596)
..++..+++.+-|++.+-+.. .|+....+..+.|.++ ++..++++..|--.+ +-.+..+++.+.|+..
T Consensus 154 ~~eea~~f~~~tgvD~Lavs~Gt~hg~~~~~~~l~~e~L~~i---~~~~~iPlv~hGgSG-i~~e~i~~~i~~Gi~k 226 (282)
T TIGR01859 154 DPDEAEQFVKETGVDYLAAAIGTSHGKYKGEPGLDFERLKEI---KELTNIPLVLHGASG-IPEEQIKKAIKLGIAK 226 (282)
T ss_pred CHHHHHHHHHHHCcCEEeeccCccccccCCCCccCHHHHHHH---HHHhCCCEEEECCCC-CCHHHHHHHHHcCCCE
Confidence 455667777656998876432 2333334555555444 444579999995332 2233455556666554
No 220
>PF01791 DeoC: DeoC/LacD family aldolase; InterPro: IPR002915 This family includes the enzyme deoxyribose-phosphate aldolase, which is involved in nucleotide metabolism. 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde The family also includes a group of related bacterial proteins of unknown function, see examples Q57843 from SWISSPROT and P76143 from SWISSPROT.; GO: 0016829 lyase activity; PDB: 2A4A_A 1VCV_B 1P1X_A 1KTN_B 1JCL_A 1JCJ_A 1MZH_A 3GKF_D 3GLC_L 3GND_N ....
Probab=37.61 E-value=1.9e+02 Score=28.37 Aligned_cols=104 Identities=14% Similarity=0.128 Sum_probs=60.2
Q ss_pred hHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhH-----HHHHHHHHHHcCCC
Q psy10113 92 DFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQV-----QQEMAELCEKHGVN 166 (596)
Q Consensus 92 ~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~e~~~lv~~~Gv~ 166 (596)
++....+.++..|+..|. +.+. ....+.........+..+-.++..+ ..+.+.. ..+.++.++ .|++
T Consensus 20 ~~~~~~~~a~~~~~~av~--v~p~----~~~~~~~~~~~~~~~~~~vi~fp~g-~~~~~~k~~~~~~~~ve~A~~-~GAd 91 (236)
T PF01791_consen 20 DIKKLCREAIEYGFDAVC--VTPG----YVKPAAELLAGSGVKVGLVIGFPFG-TSTTEPKGYDQIVAEVEEAIR-LGAD 91 (236)
T ss_dssp HHHHHHHHHHHHTSSEEE--EEGG----GHHHHHHHSTTSTSEEEEEESTTTS-SSTHHHHTCEEEHHHHHHHHH-TT-S
T ss_pred hHHHHHHHHHHhCCCEEE--ECHH----HHHHHHHHhhccccccceEEEeCCC-CCccccccccchHHHHHHHHH-cCCc
Confidence 778888899999999885 2232 1222222111111123333333222 2222333 456777765 5999
Q ss_pred EEEEEeecC---C-CccCCHHHHHHHHHHHHhcCCeEEEec
Q psy10113 167 SFKTFMAYK---G-LYMLSDGELYDAFSAIKNLGAIAMVHA 203 (596)
Q Consensus 167 ~~k~~~~~~---~-~~~~~~~~l~~~~~~a~~~g~~~~vHa 203 (596)
.+++.+.+. . ......+++.++.+.|+++++++.+.+
T Consensus 92 ~vd~vi~~~~~~~~~~~~~~~~i~~v~~~~~~~gl~vIlE~ 132 (236)
T PF01791_consen 92 EVDVVINYGALGSGNEDEVIEEIAAVVEECHKYGLKVILEP 132 (236)
T ss_dssp EEEEEEEHHHHHTTHHHHHHHHHHHHHHHHHTSEEEEEEEE
T ss_pred eeeeeccccccccccHHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 999888662 1 122234678899999999999999985
No 221
>PF00682 HMGL-like: HMGL-like of this family is not conserved in other members. are a sub-families of this Pfam.; InterPro: IPR000891 Pyruvate carboxylase (6.4.1.1 from EC) (PC), a member of the biotin-dependent enzyme family, is involved in the gluconeogenesis by mediating the carboxylation of pyruvate to oxaloacetate. Biotin-dependent carboxylase enzymes perform a two step reaction. Enzyme-bound biotin is first carboxylated by bicarbonate and ATP and the carboxyl group temporarily bound to biotin is subsequently transferred to an acceptor substrate such as pyruvate []. PC has three functional domains: a biotin carboxylase (BC) domain, a carboxyltransferase (CT) domain which perform the second part of the reaction and a biotinyl domain [, ]. The mechanism by which the carboxyl group is transferred from the carboxybiotin to the pyruvate is not well understood. The pyruvate carboxyltransferase domain is also found in other pyruvate binding enzymes and acetyl-CoA dependent enzymes suggesting that this domain can be associated with different enzymatic activities. This domain is found towards the N-terminal region of various aldolase enzymes. This N-terminal TIM barrel domain [] interacts with the C-terminal domain. The C-terminal DmpG_comm domain (IPR012425 from INTERPRO) is thought to promote heterodimerisation with members of IPR003361 from INTERPRO to form a bifunctional aldolase-dehydrogenase []. ; GO: 0003824 catalytic activity; PDB: 3MP5_E 3MP3_E 2CW6_E 3MP4_D 3HBL_A 3HB9_C 3HO8_A 3BG5_C 1YDN_B 3RMJ_A ....
Probab=37.43 E-value=3.9e+02 Score=26.03 Aligned_cols=116 Identities=16% Similarity=0.130 Sum_probs=60.7
Q ss_pred CCcchHHHHHHHHHhCCceEEeccccCCC-------CccH---HHHHHHHHHHhcc-CceeeeeccccccCCChhHHHHH
Q psy10113 88 TSVDDFYHGTKAAVAGGTTTIIDFALPRK-------GESL---IKTYESWRQKADE-KVCCDYALHVGITWWSDQVQQEM 156 (596)
Q Consensus 88 ~~~d~~~~g~~~al~~GtTti~D~~~~~~-------~~~~---~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~ 156 (596)
...+++..+...+...|+..+.-+...+. +.+. .+.+.+....+.. +..+.+++ ...+..+.+...++
T Consensus 64 ~~~~~i~~~~~~~~~~g~~~i~i~~~~s~~~~~~~~~~~~~~~~~~~~~~v~~ak~~g~~v~~~~-~~~~~~~~~~~~~~ 142 (237)
T PF00682_consen 64 ANEEDIERAVEAAKEAGIDIIRIFISVSDLHIRKNLNKSREEALERIEEAVKYAKELGYEVAFGC-EDASRTDPEELLEL 142 (237)
T ss_dssp SCHHHHHHHHHHHHHTTSSEEEEEEETSHHHHHHHTCSHHHHHHHHHHHHHHHHHHTTSEEEEEE-TTTGGSSHHHHHHH
T ss_pred ehHHHHHHHHHhhHhccCCEEEecCcccHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCceEeCc-cccccccHHHHHHH
Confidence 34456667677777788888753322211 0111 2222222222221 22222222 12233445555555
Q ss_pred HHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHh-cC-CeEEEecCchh
Q psy10113 157 AELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKN-LG-AIAMVHAENGE 207 (596)
Q Consensus 157 ~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~-~g-~~~~vHae~~~ 207 (596)
.+.+.+.|+..+.+.-+ .-.++++++.++++..++ +. ..+.+|+.|+.
T Consensus 143 ~~~~~~~g~~~i~l~Dt---~G~~~P~~v~~lv~~~~~~~~~~~l~~H~Hnd~ 192 (237)
T PF00682_consen 143 AEALAEAGADIIYLADT---VGIMTPEDVAELVRALREALPDIPLGFHAHNDL 192 (237)
T ss_dssp HHHHHHHT-SEEEEEET---TS-S-HHHHHHHHHHHHHHSTTSEEEEEEBBTT
T ss_pred HHHHHHcCCeEEEeeCc---cCCcCHHHHHHHHHHHHHhccCCeEEEEecCCc
Confidence 55555679987754332 234688889998888885 45 78889988753
No 222
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=37.35 E-value=1.9e+02 Score=29.30 Aligned_cols=95 Identities=16% Similarity=0.119 Sum_probs=52.8
Q ss_pred HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHh---cCCeEEEec--CchhhhHHHHHHHHHcCCCCCC----cccCCCh
Q psy10113 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKN---LGAIAMVHA--ENGEIIDKNTQKLLAAGIKGPE----GHQLSRP 232 (596)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~~~vHa--e~~~~i~~~~~~l~~~Gi~~~~----~~~~~~p 232 (596)
+.|++++-+.-.-.....++.+|-.++++.+.+ -..++.+++ .+.....+..+.+.+.|+++.. .+.....
T Consensus 33 ~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~gv~~~st~~~i~~a~~a~~~Gad~v~v~~P~~~~~s~ 112 (289)
T PF00701_consen 33 EAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIAGVGANSTEEAIELARHAQDAGADAVLVIPPYYFKPSQ 112 (289)
T ss_dssp HTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEEEEESSSHHHHHHHHHHHHHTT-SEEEEEESTSSSCCH
T ss_pred HcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEecCcchhHHHHHHHHHHHhhcCceEEEEeccccccchh
Confidence 468887655443334456788877776666554 345666664 3444455566677777766522 2222233
Q ss_pred HHHHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 233 EEVEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 233 ~~~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
+++ . .....++...+.|+.+.+.-
T Consensus 113 ~~l--~--~y~~~ia~~~~~pi~iYn~P 136 (289)
T PF00701_consen 113 EEL--I--DYFRAIADATDLPIIIYNNP 136 (289)
T ss_dssp HHH--H--HHHHHHHHHSSSEEEEEEBH
T ss_pred hHH--H--HHHHHHHhhcCCCEEEEECC
Confidence 322 2 23344556688999887764
No 223
>TIGR01235 pyruv_carbox pyruvate carboxylase. This enzyme plays a role in gluconeogensis but not glycolysis.
Probab=36.53 E-value=9e+02 Score=30.04 Aligned_cols=149 Identities=18% Similarity=0.185 Sum_probs=89.0
Q ss_pred ccHHHHHHHHHHHhccCceeee----eccccccCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHH
Q psy10113 118 ESLIKTYESWRQKADEKVCCDY----ALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIK 193 (596)
Q Consensus 118 ~~~~~a~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~ 193 (596)
++..+.++.+++... +...-. .-.++...+.+++.+..-+...+.|++-|.+|-+. -..+.+...++.++
T Consensus 589 EdPwerl~~~r~~~p-n~~~qml~Rg~n~vgy~~ypd~vv~~f~~~~~~~GidifrifD~l-----N~~~n~~~~~~~~~ 662 (1143)
T TIGR01235 589 EDPWERLEDLRKGVP-NILFQMLLRGANGVGYTNYPDNVVKYFVKQAAQGGIDIFRVFDSL-----NWVENMRVGMDAVA 662 (1143)
T ss_pred CCHHHHHHHHHHhCC-CCceeeeeccccccCccCCCHHHHHHHHHHHHHcCCCEEEECccC-----cCHHHHHHHHHHHH
Confidence 455566677766653 222222 22345778888988888887777899999998653 35567899999999
Q ss_pred hcCCeEEEec-------------CchhhhHHHHHHHHHcCCCCCC---cccCCChHHHHHHHHHHHHHHhcccCCCeEEE
Q psy10113 194 NLGAIAMVHA-------------ENGEIIDKNTQKLLAAGIKGPE---GHQLSRPEEVEAEAVTRACTIANQVDCPLYVV 257 (596)
Q Consensus 194 ~~g~~~~vHa-------------e~~~~i~~~~~~l~~~Gi~~~~---~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~ 257 (596)
+.|..+..-. .+-+...+..+.+.+.|+.... ---+..|..+. .+-+++. +..+.|++++
T Consensus 663 ~~g~~~~~~i~yt~~~~d~~~~~~~l~y~~~~ak~l~~~Gad~I~ikDt~Gll~P~~~~--~Lv~~lk--~~~~~pi~~H 738 (1143)
T TIGR01235 663 EAGKVVEAAICYTGDILDPARPKYDLKYYTNLAVELEKAGAHILGIKDMAGLLKPAAAK--LLIKALR--EKTDLPIHFH 738 (1143)
T ss_pred HcCCEEEEEEEEeccCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEECCCcCCcCHHHHH--HHHHHHH--HhcCCeEEEE
Confidence 9998765431 1223344567788888865421 22344566552 2222322 3357888762
Q ss_pred -ecCcHHHHHHHHHHHHHHhhcCC
Q psy10113 258 -HIMSKAAGDAMAYKRKELMKKGK 280 (596)
Q Consensus 258 -hv~s~~~~~~i~~a~~~~~~~G~ 280 (596)
|-...-+..-.-.|-+. |+
T Consensus 739 ~Hdt~Gla~an~laA~ea----Ga 758 (1143)
T TIGR01235 739 THDTSGIAVASMLAAVEA----GV 758 (1143)
T ss_pred ECCCCCcHHHHHHHHHHh----CC
Confidence 33333333333344445 87
No 224
>PRK05835 fructose-bisphosphate aldolase; Provisional
Probab=35.75 E-value=5.2e+02 Score=26.76 Aligned_cols=51 Identities=12% Similarity=0.152 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCEEEEEee-cCCC------ccCCHHHHHHHHHHHHhcCCeEEEecCch
Q psy10113 153 QQEMAELCEKHGVNSFKTFMA-YKGL------YMLSDGELYDAFSAIKNLGAIAMVHAENG 206 (596)
Q Consensus 153 ~~e~~~lv~~~Gv~~~k~~~~-~~~~------~~~~~~~l~~~~~~a~~~g~~~~vHae~~ 206 (596)
.++..+++++-|++.+-+..+ -||. +.++.+.|.++ .+..+.++..|--.+
T Consensus 157 PeeA~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~L~f~~L~~I---~~~~~iPLVLHGgSG 214 (307)
T PRK05835 157 PKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEV---KRLTNIPLVLHGASA 214 (307)
T ss_pred HHHHHHHHHhhCCCEEEEccCccccccCCCCCCccCHHHHHHH---HHHhCCCEEEeCCCC
Confidence 467777887779998776543 2333 34556656555 445589999995443
No 225
>PRK11858 aksA trans-homoaconitate synthase; Reviewed
Probab=35.31 E-value=5.8e+02 Score=27.17 Aligned_cols=157 Identities=16% Similarity=0.182 Sum_probs=86.3
Q ss_pred CCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCE
Q psy10113 88 TSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNS 167 (596)
Q Consensus 88 ~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~ 167 (596)
++.++-..-++...+.||..| +..+|..+..-.+.++...+.. ..+ .+..|.....++++.+. +.|+..
T Consensus 23 ~s~e~k~~ia~~L~~~GV~~I-E~G~p~~~~~~~e~i~~i~~~~---~~~------~i~~~~r~~~~di~~a~-~~g~~~ 91 (378)
T PRK11858 23 FTNEEKLAIARMLDEIGVDQI-EAGFPAVSEDEKEAIKAIAKLG---LNA------SILALNRAVKSDIDASI-DCGVDA 91 (378)
T ss_pred CCHHHHHHHHHHHHHhCCCEE-EEeCCCcChHHHHHHHHHHhcC---CCe------EEEEEcccCHHHHHHHH-hCCcCE
Confidence 344555555667778999887 4445554444444555544321 111 12223333355566665 469998
Q ss_pred EEEEeecCCC-----ccCCH----HHHHHHHHHHHhcCCeEEEecCc-----hhhhHHHHHHHHHcCCCCC---CcccCC
Q psy10113 168 FKTFMAYKGL-----YMLSD----GELYDAFSAIKNLGAIAMVHAEN-----GEIIDKNTQKLLAAGIKGP---EGHQLS 230 (596)
Q Consensus 168 ~k~~~~~~~~-----~~~~~----~~l~~~~~~a~~~g~~~~vHae~-----~~~i~~~~~~l~~~Gi~~~---~~~~~~ 230 (596)
+.++..-... ...+. +.+.+.++.|++.|..+.+.++. .+.+.+..+.+.+.|.... ...-..
T Consensus 92 i~i~~~~Sd~h~~~~~~~s~~~~l~~~~~~v~~a~~~G~~v~~~~ed~~r~~~~~l~~~~~~~~~~Ga~~I~l~DT~G~~ 171 (378)
T PRK11858 92 VHIFIATSDIHIKHKLKKTREEVLERMVEAVEYAKDHGLYVSFSAEDASRTDLDFLIEFAKAAEEAGADRVRFCDTVGIL 171 (378)
T ss_pred EEEEEcCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEeccCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCC
Confidence 8888752221 12233 34556888999999999988653 3445555677777775542 222345
Q ss_pred ChHHHHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 231 RPEEVEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 231 ~p~~~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
.|.++. +.+.... +..++++.+ |+-
T Consensus 172 ~P~~v~-~lv~~l~---~~~~~~l~~-H~H 196 (378)
T PRK11858 172 DPFTMY-ELVKELV---EAVDIPIEV-HCH 196 (378)
T ss_pred CHHHHH-HHHHHHH---HhcCCeEEE-Eec
Confidence 676663 3333222 223666655 444
No 226
>TIGR02660 nifV_homocitr homocitrate synthase NifV. This family consists of the NifV clade of homocitrate synthases, most of which are found in operons for nitrogen fixation. Members are closely homologous to enzymes that include 2-isopropylmalate synthase, (R)-citramalate synthase, and homocitrate synthases associated with other processes. The homocitrate made by this enzyme becomes a part of the iron-molybdenum cofactor of nitrogenase.
Probab=35.10 E-value=4.5e+02 Score=27.81 Aligned_cols=77 Identities=19% Similarity=0.212 Sum_probs=48.6
Q ss_pred cCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchhhhH-HHHHHHHHcCCCC
Q psy10113 146 TWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGEIID-KNTQKLLAAGIKG 223 (596)
Q Consensus 146 ~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~~i~-~~~~~l~~~Gi~~ 223 (596)
+..+.+...++.+.+.+.|++.+.+.- ..-.++++++.++++..++ .+.++.+|+.|+.-.. ......+..|++.
T Consensus 137 ~r~~~~~l~~~~~~~~~~Ga~~i~l~D---T~G~~~P~~v~~lv~~l~~~~~v~l~~H~HNd~GlA~ANalaA~~aGa~~ 213 (365)
T TIGR02660 137 SRADPDFLVELAEVAAEAGADRFRFAD---TVGILDPFSTYELVRALRQAVDLPLEMHAHNDLGMATANTLAAVRAGATH 213 (365)
T ss_pred CCCCHHHHHHHHHHHHHcCcCEEEEcc---cCCCCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhCCCE
Confidence 344555555666556667988764332 2234688999999888765 4789999998764222 2334456777665
Q ss_pred CC
Q psy10113 224 PE 225 (596)
Q Consensus 224 ~~ 225 (596)
.+
T Consensus 214 vd 215 (365)
T TIGR02660 214 VN 215 (365)
T ss_pred EE
Confidence 44
No 227
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=35.00 E-value=2.6e+02 Score=28.76 Aligned_cols=98 Identities=14% Similarity=0.082 Sum_probs=58.3
Q ss_pred HHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcC---CeEEEec--CchhhhHHHHHHHHHcCCCCCC--cccCCChH
Q psy10113 161 EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLG---AIAMVHA--ENGEIIDKNTQKLLAAGIKGPE--GHQLSRPE 233 (596)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g---~~~~vHa--e~~~~i~~~~~~l~~~Gi~~~~--~~~~~~p~ 233 (596)
.+.|++++-+.-+-.....++.+|-.++++.+.+.- +++.+++ .+.....+..+...+.|+++.- -.++..|.
T Consensus 35 i~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpviaG~g~~~t~eai~lak~a~~~Gad~il~v~PyY~k~~ 114 (299)
T COG0329 35 IAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIAGVGSNSTAEAIELAKHAEKLGADGILVVPPYYNKPS 114 (299)
T ss_pred HHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEEecCCCcHHHHHHHHHHHHhcCCCEEEEeCCCCcCCC
Confidence 346887765444333445678888777777777642 4566664 3344455566777788876643 22344444
Q ss_pred HHHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 234 EVEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 234 ~~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
+-+.. ..-..++...+.|+.+..+-
T Consensus 115 ~~gl~--~hf~~ia~a~~lPvilYN~P 139 (299)
T COG0329 115 QEGLY--AHFKAIAEAVDLPVILYNIP 139 (299)
T ss_pred hHHHH--HHHHHHHHhcCCCEEEEeCc
Confidence 33323 33344556669998887764
No 228
>PRK09282 pyruvate carboxylase subunit B; Validated
Probab=34.57 E-value=7.4e+02 Score=28.23 Aligned_cols=179 Identities=18% Similarity=0.127 Sum_probs=101.2
Q ss_pred CCCcchHHHHHHHHHhCCceEEeccccC--------CCCccHHHHHHHHHHHhccCceeeeec----cccccCCChhHHH
Q psy10113 87 ATSVDDFYHGTKAAVAGGTTTIIDFALP--------RKGESLIKTYESWRQKADEKVCCDYAL----HVGITWWSDQVQQ 154 (596)
Q Consensus 87 ~~~~d~~~~g~~~al~~GtTti~D~~~~--------~~~~~~~~a~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 154 (596)
.+..++...-+....+.|+..+- +..+ -..++..+.++.+++... +...-..+ ..+...+.+++.+
T Consensus 22 r~~t~d~l~ia~~l~~~G~~~iE-~~ggatfd~~~rfl~edp~e~l~~l~~~~~-~~~l~~l~Rg~N~~gy~~ypd~vv~ 99 (592)
T PRK09282 22 RMRTEDMLPIAEKLDKVGFWSLE-VWGGATFDVCIRYLNEDPWERLRKLKKALP-NTPLQMLLRGQNLVGYRHYPDDVVE 99 (592)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEE-ecCCccchhhcccCCccHHHHHHHHHHhCC-CCEEEEEeccccccccccccchhhH
Confidence 45667777777777778888873 2211 113355566666665532 22221111 1334556667776
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEec---C----chhhhHHHHHHHHHcCCCCCC--
Q psy10113 155 EMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHA---E----NGEIIDKNTQKLLAAGIKGPE-- 225 (596)
Q Consensus 155 e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHa---e----~~~~i~~~~~~l~~~Gi~~~~-- 225 (596)
+.-+...+.|++.|.+|.+.. ....+...++.+++.|..+.+-. . +.+...+..+.+.+.|+....
T Consensus 100 ~~v~~A~~~Gvd~irif~~ln-----d~~n~~~~i~~ak~~G~~v~~~i~~t~~p~~t~~~~~~~a~~l~~~Gad~I~i~ 174 (592)
T PRK09282 100 KFVEKAAENGIDIFRIFDALN-----DVRNMEVAIKAAKKAGAHVQGTISYTTSPVHTIEKYVELAKELEEMGCDSICIK 174 (592)
T ss_pred HHHHHHHHCCCCEEEEEEecC-----hHHHHHHHHHHHHHcCCEEEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 666666678999999997632 23578888999999998776332 1 234555667888888875432
Q ss_pred -cccCCChHHHHHHHHHHHHHHhcccCCCeEEE-ecCcHHHHHHHHHHHHHHhhcCC
Q psy10113 226 -GHQLSRPEEVEAEAVTRACTIANQVDCPLYVV-HIMSKAAGDAMAYKRKELMKKGK 280 (596)
Q Consensus 226 -~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~-hv~s~~~~~~i~~a~~~~~~~G~ 280 (596)
-.-...|..+. +.+. ++. ...+.|++++ |-...-+..-.-.|-+. |+
T Consensus 175 Dt~G~~~P~~~~-~lv~-~lk--~~~~~pi~~H~Hnt~Gla~An~laAv~a----Ga 223 (592)
T PRK09282 175 DMAGLLTPYAAY-ELVK-ALK--EEVDLPVQLHSHCTSGLAPMTYLKAVEA----GV 223 (592)
T ss_pred CcCCCcCHHHHH-HHHH-HHH--HhCCCeEEEEEcCCCCcHHHHHHHHHHh----CC
Confidence 22344566653 2222 222 3346777652 33333333333334344 87
No 229
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=34.42 E-value=2.6e+02 Score=27.35 Aligned_cols=41 Identities=22% Similarity=0.160 Sum_probs=31.2
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCe
Q psy10113 155 EMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAI 198 (596)
Q Consensus 155 e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 198 (596)
..-.++++.|..++|.| ..+|. -..+|++.+.+.|.+.|..
T Consensus 139 tAiaml~dmG~~SiKff-PM~Gl--~~leE~~avA~aca~~g~~ 179 (236)
T TIGR03581 139 TAIAMLKDMGGSSVKFF-PMGGL--KHLEEYAAVAKACAKHGFY 179 (236)
T ss_pred HHHHHHHHcCCCeeeEe-ecCCc--ccHHHHHHHHHHHHHcCCc
Confidence 34456677899999966 33443 4788999999999999986
No 230
>PRK15108 biotin synthase; Provisional
Probab=33.93 E-value=5.8e+02 Score=26.79 Aligned_cols=59 Identities=20% Similarity=0.231 Sum_probs=40.9
Q ss_pred HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCC
Q psy10113 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIK 222 (596)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~ 222 (596)
+.|+..|-+..+..+......+.+.++++.+++.++.+.++ ++....+..++|.+.|++
T Consensus 90 ~~G~~~i~i~~~g~~p~~~~~e~i~~~i~~ik~~~i~v~~s--~G~ls~e~l~~LkeAGld 148 (345)
T PRK15108 90 AAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLETCMT--LGTLSESQAQRLANAGLD 148 (345)
T ss_pred HcCCCEEEEEecCCCCCcchHHHHHHHHHHHHhCCCEEEEe--CCcCCHHHHHHHHHcCCC
Confidence 46888775433322323345677889999999888776544 555567788899999987
No 231
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=33.93 E-value=5e+02 Score=26.01 Aligned_cols=98 Identities=16% Similarity=0.170 Sum_probs=59.8
Q ss_pred hhHHHHHHHHHHHcCCCEEEEEee--cCCCccCCHH-H---HHHHHHHHHhc-CCeEEEecCchhhhHHHHHHHHHcCCC
Q psy10113 150 DQVQQEMAELCEKHGVNSFKTFMA--YKGLYMLSDG-E---LYDAFSAIKNL-GAIAMVHAENGEIIDKNTQKLLAAGIK 222 (596)
Q Consensus 150 ~~~~~e~~~lv~~~Gv~~~k~~~~--~~~~~~~~~~-~---l~~~~~~a~~~-g~~~~vHae~~~~i~~~~~~l~~~Gi~ 222 (596)
++..+...++++ .|++.+.+... ..+...++.+ | +..+++.+++. +.++.+|..+.. ..+..++.|..
T Consensus 23 ~~~~~~a~~~~~-~GA~iIDIG~~st~p~~~~i~~~~E~~rl~~~v~~~~~~~~~plsiDT~~~~----vi~~al~~G~~ 97 (257)
T TIGR01496 23 DKAVAHAERMLE-EGADIIDVGGESTRPGADRVSPEEELNRVVPVIKALRDQPDVPISVDTYRAE----VARAALEAGAD 97 (257)
T ss_pred HHHHHHHHHHHH-CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEeCCCHH----HHHHHHHcCCC
Confidence 344555555554 59998887431 1122223433 5 66777888776 999999998866 44455566765
Q ss_pred CCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 223 GPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 223 ~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
-......... ...+.+++++++++.+.|..
T Consensus 98 iINsis~~~~--------~~~~~l~~~~~~~vV~m~~~ 127 (257)
T TIGR01496 98 IINDVSGGQD--------PAMLEVAAEYGVPLVLMHMR 127 (257)
T ss_pred EEEECCCCCC--------chhHHHHHHcCCcEEEEeCC
Confidence 5443333321 12445567789999998864
No 232
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=33.25 E-value=4e+02 Score=24.73 Aligned_cols=52 Identities=21% Similarity=0.093 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEEeecCCCcc------CC------HHHHHHHHHHHHhcCCeEEEe
Q psy10113 151 QVQQEMAELCEKHGVNSFKTFMAYKGLYM------LS------DGELYDAFSAIKNLGAIAMVH 202 (596)
Q Consensus 151 ~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~------~~------~~~l~~~~~~a~~~g~~~~vH 202 (596)
...+++.+++++.|+....+......... .. .+.+.+.++.|+.+|+...+.
T Consensus 27 ~~~~~~~~~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lg~~~i~~ 90 (213)
T PF01261_consen 27 DEAEELRRLLEDYGLKIASLHPPTNFWSPDEENGSANDEREEALEYLKKAIDLAKRLGAKYIVV 90 (213)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEESSSCTGTTSTTSSSHHHHHHHHHHHHHHHHHHHTBSEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEEecccccccccccccCcchhhHHHHHHHHHHHHHHHHhCCCceee
Confidence 34667778888888874433322211111 12 568999999999999876554
No 233
>PRK07945 hypothetical protein; Provisional
Probab=33.14 E-value=5.9e+02 Score=26.62 Aligned_cols=36 Identities=25% Similarity=0.174 Sum_probs=25.8
Q ss_pred ccccccCCCccccCCCCcchHHHHHHHHHhCCceEEe--ccc
Q psy10113 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTII--DFA 112 (596)
Q Consensus 73 ~ID~HtHl~~~~~~~~~~d~~~~g~~~al~~GtTti~--D~~ 112 (596)
.+|.|+|...+ .+ .+.+....++|.+.|.+.+. ||.
T Consensus 97 ~~D~H~HT~~S-dg---~~~~ee~v~~Ai~~Gl~~i~~TDH~ 134 (335)
T PRK07945 97 RGDLHTHSDWS-DG---GSPIEEMARTAAALGHEYCALTDHS 134 (335)
T ss_pred hhhcccccCCC-CC---CCCHHHHHHHHHHCCCCEEEEeCCC
Confidence 47999998765 23 34455568899999999873 553
No 234
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [].; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3Q94_A 1RVG_B 1RV8_C 3C4U_A 3C56_B 3C52_A 2FJK_A 3N9R_P 3N9S_A 1GVF_B ....
Probab=33.12 E-value=5.1e+02 Score=26.47 Aligned_cols=106 Identities=19% Similarity=0.240 Sum_probs=53.3
Q ss_pred HHHHHHHHhCCceEEe-ccccCCCCccHHHHHHHHH---HHhccC-cee--eeeccccccC---CC---h---hHHHHHH
Q psy10113 94 YHGTKAAVAGGTTTII-DFALPRKGESLIKTYESWR---QKADEK-VCC--DYALHVGITW---WS---D---QVQQEMA 157 (596)
Q Consensus 94 ~~g~~~al~~GtTti~-D~~~~~~~~~~~~a~~~~~---~~~~~~-~~~--~~~~~~~~~~---~~---~---~~~~e~~ 157 (596)
+...+.|+..|+|+|. |. +..++.+.++..+ +.+... ..+ ..|.-.+... .. + ...++..
T Consensus 86 ~e~i~~ai~~GftSVM~Dg----S~l~~eeNi~~T~~vv~~ah~~gv~VEaElG~i~g~ed~~~~~~~~~~~~TdP~~a~ 161 (287)
T PF01116_consen 86 FEDIKRAIDAGFTSVMIDG----SALPFEENIAITREVVEYAHAYGVSVEAELGHIGGKEDGIESEEETESLYTDPEEAK 161 (287)
T ss_dssp HHHHHHHHHHTSSEEEEE-----TTS-HHHHHHHHHHHHHHHHHTT-EEEEEESBSSSSCTTCSSSTT-TTCSSSHHHHH
T ss_pred HHHHHHHHHhCcccccccC----CcCCHHHHHHHHHHHHHhhhhhCCEEEEEeeeeeccCCCccccccccccccCHHHHH
Confidence 3447788999999994 32 2234444443333 333321 111 1221111110 00 1 1456778
Q ss_pred HHHHHcCCCEEEEEee-cCCCc------cCCHHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 158 ELCEKHGVNSFKTFMA-YKGLY------MLSDGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 158 ~lv~~~Gv~~~k~~~~-~~~~~------~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
+++++-|++++-+..+ -||.+ .++.+.|.++.+... +.++..|--.
T Consensus 162 ~Fv~~TgvD~LAvaiGt~HG~y~~~~~p~Ld~~~L~~I~~~~~--~iPLVlHGgS 214 (287)
T PF01116_consen 162 EFVEETGVDALAVAIGTAHGMYKGGKKPKLDFDRLKEIREAVP--DIPLVLHGGS 214 (287)
T ss_dssp HHHHHHTTSEEEE-SSSBSSSBSSSSSTC--HHHHHHHHHHHH--TSEEEESSCT
T ss_pred HHHHHhCCCEEEEecCccccccCCCCCcccCHHHHHHHHHhcC--CCCEEEECCC
Confidence 8888889999887664 23333 344444444443332 8999999544
No 235
>cd07948 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain. Homocitrate synthase (HCS) catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, the first step in the lysine biosynthesis pathway. This family includes the Yarrowia lipolytica LYS1 protein as well as the Saccharomyces cerevisiae LYS20 and LYS21 proteins. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. Th
Probab=33.07 E-value=5.2e+02 Score=25.97 Aligned_cols=56 Identities=13% Similarity=0.136 Sum_probs=37.3
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchh
Q psy10113 149 SDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGE 207 (596)
Q Consensus 149 ~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~ 207 (596)
+.+...++.+.+.+.|+..+.+-- ..-..++++++++++..++ ++.++.+|+.|..
T Consensus 139 ~~~~l~~~~~~~~~~g~~~i~l~D---t~G~~~P~~v~~~~~~~~~~~~~~i~~H~Hn~~ 195 (262)
T cd07948 139 DLVDLLRVYRAVDKLGVNRVGIAD---TVGIATPRQVYELVRTLRGVVSCDIEFHGHNDT 195 (262)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECC---cCCCCCHHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 344455555555667888654322 2235688899998888776 4788999988754
No 236
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=32.73 E-value=4.4e+02 Score=27.55 Aligned_cols=77 Identities=13% Similarity=0.134 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhcCCeEEEecCchhhh-HHHHHHHHHcCCCCC---------CcccCCChHHHHHHHHHHHHHHhcccCCC
Q psy10113 184 ELYDAFSAIKNLGAIAMVHAENGEII-DKNTQKLLAAGIKGP---------EGHQLSRPEEVEAEAVTRACTIANQVDCP 253 (596)
Q Consensus 184 ~l~~~~~~a~~~g~~~~vHae~~~~i-~~~~~~l~~~Gi~~~---------~~~~~~~p~~~e~~a~~~~i~la~~~~~p 253 (596)
++.++++.+++.|..+.+.. |+..+ .+..+++.+.|+... +.|...+-..-..+.+.+++...++.+.+
T Consensus 69 ~~~~ii~~~~~~g~~~~l~T-NG~ll~~e~~~~L~~~g~~~v~iSldg~~~e~~d~~rg~~g~f~~v~~~i~~l~~~g~~ 147 (358)
T TIGR02109 69 DLVELVAHARRLGLYTNLIT-SGVGLTEARLDALADAGLDHVQLSFQGVDEALADRIAGYKNAFEQKLAMARAVKAAGLP 147 (358)
T ss_pred cHHHHHHHHHHcCCeEEEEe-CCccCCHHHHHHHHhCCCCEEEEeCcCCCHHHHHHhcCCccHHHHHHHHHHHHHhCCCc
Confidence 46667777777776554432 33222 234455555554321 11111110000123344556666667777
Q ss_pred eEEEecCc
Q psy10113 254 LYVVHIMS 261 (596)
Q Consensus 254 ~~i~hv~s 261 (596)
+.+.-+.+
T Consensus 148 v~v~~vv~ 155 (358)
T TIGR02109 148 LTLNFVIH 155 (358)
T ss_pred eEEEEEec
Confidence 66544443
No 237
>PRK06801 hypothetical protein; Provisional
Probab=32.65 E-value=4.8e+02 Score=26.68 Aligned_cols=105 Identities=8% Similarity=0.010 Sum_probs=57.3
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHH-HHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCc
Q psy10113 148 WSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYD-AFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEG 226 (596)
Q Consensus 148 ~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~ 226 (596)
++.+....+-+...+.+..-+-.+ +.........+.+.. +...|++..+++.+|...+.. .+..++.++.|++..--
T Consensus 26 ~n~e~~~avi~AAe~~~~PvIl~~-~~~~~~~~~~~~~~~~~~~~a~~~~vpV~lHlDH~~~-~e~i~~Ai~~GftSVm~ 103 (286)
T PRK06801 26 LDSHFLRALFAAAKQERSPFIINI-AEVHFKYISLESLVEAVKFEAARHDIPVVLNLDHGLH-FEAVVRALRLGFSSVMF 103 (286)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEe-CcchhhcCCHHHHHHHHHHHHHHCCCCEEEECCCCCC-HHHHHHHHHhCCcEEEE
Confidence 344555555555555444332211 111111134344444 445677889999999866543 35677888889876432
Q ss_pred ccCCChHHHHHHHHHHHHHHhcccCCCe
Q psy10113 227 HQLSRPEEVEAEAVTRACTIANQVDCPL 254 (596)
Q Consensus 227 ~~~~~p~~~e~~a~~~~i~la~~~~~p~ 254 (596)
-.-..|.+-..+...+...+++..+.++
T Consensus 104 D~S~l~~eeNi~~t~~v~~~a~~~gv~V 131 (286)
T PRK06801 104 DGSTLEYEENVRQTREVVKMCHAVGVSV 131 (286)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 2222233334566667777777777665
No 238
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=32.50 E-value=4.6e+02 Score=26.85 Aligned_cols=107 Identities=12% Similarity=0.137 Sum_probs=60.7
Q ss_pred CCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHH-HHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCC
Q psy10113 147 WWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDA-FSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPE 225 (596)
Q Consensus 147 ~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~-~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~ 225 (596)
.++.+..+.+-+...+.+..-+-.+ +.........+.+... ...|++..+++.+|...+.- .+...+.++.|+++--
T Consensus 25 ~~n~e~~~avi~AAee~~sPvIlq~-s~~~~~~~~~~~~~~~~~~~a~~~~VPValHLDHg~~-~e~i~~ai~~GFtSVM 102 (286)
T PRK12738 25 IHNAETIQAILEVCSEMRSPVILAG-TPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHES-LDDIRRKVHAGVRSAM 102 (286)
T ss_pred eCCHHHHHHHHHHHHHHCCCEEEEc-CcchhhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCC-HHHHHHHHHcCCCeEe
Confidence 3445555555555555454333211 1111111233444433 45577889999999866542 4466778888987744
Q ss_pred cccCCChHHHHHHHHHHHHHHhcccCCCeE
Q psy10113 226 GHQLSRPEEVEAEAVTRACTIANQVDCPLY 255 (596)
Q Consensus 226 ~~~~~~p~~~e~~a~~~~i~la~~~~~p~~ 255 (596)
--.-..|-+-+.+.+.++..+|+..|+.+.
T Consensus 103 ~DgS~lp~eeNi~~T~evv~~Ah~~gv~VE 132 (286)
T PRK12738 103 IDGSHFPFAENVKLVKSVVDFCHSQDCSVE 132 (286)
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 332334555556777778888877777654
No 239
>cd00945 Aldolase_Class_I Class I aldolases. The class I aldolases use an active-site lysine which stablilzes a reaction intermediates via Schiff base formation, and have TIM beta/alpha barrel fold. The members of this family include 2-keto-3-deoxy-6-phosphogluconate (KDPG) and 2-keto-4-hydroxyglutarate (KHG) aldolases, transaldolase, dihydrodipicolinate synthase sub-family, Type I 3-dehydroquinate dehydratase, DeoC and DhnA proteins, and metal-independent fructose-1,6-bisphosphate aldolase. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=30.80 E-value=4.3e+02 Score=24.38 Aligned_cols=102 Identities=14% Similarity=0.082 Sum_probs=54.3
Q ss_pred CcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhcc-CceeeeeccccccC---CChhHHHHHHHHHHHcC
Q psy10113 89 SVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADE-KVCCDYALHVGITW---WSDQVQQEMAELCEKHG 164 (596)
Q Consensus 89 ~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~e~~~lv~~~G 164 (596)
+.+.+..-.+.++++|+..+.=. + +.++.+.+.... +.....+. +... ...+..+..+.+ .+.|
T Consensus 11 d~~~~~~~~~~~~~~gv~gi~~~--g-------~~i~~~~~~~~~~~~~v~~~v--~~~~~~~~~~~~~~~a~~a-~~~G 78 (201)
T cd00945 11 TLEDIAKLCDEAIEYGFAAVCVN--P-------GYVRLAADALAGSDVPVIVVV--GFPTGLTTTEVKVAEVEEA-IDLG 78 (201)
T ss_pred CHHHHHHHHHHHHHhCCcEEEEC--H-------HHHHHHHHHhCCCCCeEEEEe--cCCCCCCcHHHHHHHHHHH-HHcC
Confidence 45667777888899999887422 1 445555444432 23222222 1111 023344444444 4569
Q ss_pred CCEEEEEeecCCCccCC--HHHHHHHHHHHHh---cCCeEEEecC
Q psy10113 165 VNSFKTFMAYKGLYMLS--DGELYDAFSAIKN---LGAIAMVHAE 204 (596)
Q Consensus 165 v~~~k~~~~~~~~~~~~--~~~l~~~~~~a~~---~g~~~~vHae 204 (596)
++.+.+...+. +..+ .+.+.+.++...+ .++++.+...
T Consensus 79 ad~i~v~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~pv~iy~~ 121 (201)
T cd00945 79 ADEIDVVINIG--SLKEGDWEEVLEEIAAVVEAADGGLPLKVILE 121 (201)
T ss_pred CCEEEEeccHH--HHhCCCHHHHHHHHHHHHHHhcCCceEEEEEE
Confidence 99887654321 1123 5666666555544 4888887653
No 240
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=30.79 E-value=4.8e+02 Score=26.62 Aligned_cols=74 Identities=15% Similarity=0.091 Sum_probs=49.0
Q ss_pred CHHHHHH-HHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeE
Q psy10113 181 SDGELYD-AFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLY 255 (596)
Q Consensus 181 ~~~~l~~-~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~ 255 (596)
..+.+.. +...|++..+++.+|...+.- .+...+.++.|+++----.-..|-+-+.+.+.++.++|+..|+.+.
T Consensus 58 g~~~~~~~~~~~a~~~~VPValHLDH~~~-~e~i~~ai~~GftSVMiDgS~lp~eeNi~~T~~vv~~Ah~~gvsVE 132 (284)
T PRK12737 58 GTDYIVAIAEVAARKYNIPLALHLDHHED-LDDIKKKVRAGIRSVMIDGSHLSFEENIAIVKEVVEFCHRYDASVE 132 (284)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEECCCCCC-HHHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 3344555 445677889999999765432 4567888899988643222223555556777788888887777655
No 241
>PRK07084 fructose-bisphosphate aldolase; Provisional
Probab=30.74 E-value=6.4e+02 Score=26.29 Aligned_cols=64 Identities=20% Similarity=0.299 Sum_probs=36.3
Q ss_pred HHHHHHHHHHcCCCEEEEEee-cCCCc---------cCCHHHHHHHHHHHHhc-CCeEEEecCchhhhHHHHHHHHHcC
Q psy10113 153 QQEMAELCEKHGVNSFKTFMA-YKGLY---------MLSDGELYDAFSAIKNL-GAIAMVHAENGEIIDKNTQKLLAAG 220 (596)
Q Consensus 153 ~~e~~~lv~~~Gv~~~k~~~~-~~~~~---------~~~~~~l~~~~~~a~~~-g~~~~vHae~~~~i~~~~~~l~~~G 220 (596)
.++..+++++-|++.+-+..+ -||.+ .++.+.|.++- +.. ++++..|--.+- -.+..+++.++|
T Consensus 166 peeA~~Fv~~TgvD~LAvaiGt~HG~Y~~~~~~~~p~Ld~d~L~~I~---~~~~~vPLVLHGgSg~-~~~~~~~~~~~g 240 (321)
T PRK07084 166 PEEVEDFVKKTGVDSLAISIGTSHGAYKFKPGQCPPPLRFDILEEIE---KRIPGFPIVLHGSSSV-PQEYVKTINEYG 240 (321)
T ss_pred HHHHHHHHHHhCCCEEeeccccccccccCCCCCCCCccCHHHHHHHH---HhcCCCCEEEeCCCCC-cHHHHHHHHHhc
Confidence 567778887779998876543 23433 34444444433 344 689999954421 122344444544
No 242
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=30.60 E-value=4.7e+02 Score=26.67 Aligned_cols=74 Identities=12% Similarity=0.152 Sum_probs=48.6
Q ss_pred CHHHHHHHH-HHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeE
Q psy10113 181 SDGELYDAF-SAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLY 255 (596)
Q Consensus 181 ~~~~l~~~~-~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~ 255 (596)
..+.+...+ ..|++..+++.+|...+. -.+...+.++.|+++----.-..|-+-+.+.+.++.++|+..|+.+.
T Consensus 56 ~~~~~~~~~~~~a~~~~VPValHLDHg~-~~e~i~~ai~~GFtSVM~DgS~lp~eeNi~~T~~vv~~Ah~~gv~VE 130 (282)
T TIGR01858 56 GTEYIVALCSAASTTYNMPLALHLDHHE-SLDDIRQKVHAGVRSAMIDGSHFPFAQNVKLVKEVVDFCHRQDCSVE 130 (282)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEECCCCC-CHHHHHHHHHcCCCEEeecCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 344455444 456678999999976543 24567888899987643322234555556777788888887777655
No 243
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=30.18 E-value=1.6e+02 Score=28.27 Aligned_cols=43 Identities=23% Similarity=0.163 Sum_probs=28.8
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeE
Q psy10113 154 QEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIA 199 (596)
Q Consensus 154 ~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~ 199 (596)
+..-.++++.|..++|.|- .+|. -..+|++.+.+.|.+.|..+
T Consensus 138 etAiaml~dmG~~SiKffP-m~Gl--~~leE~~avAkA~a~~g~~l 180 (218)
T PF07071_consen 138 ETAIAMLKDMGGSSIKFFP-MGGL--KHLEELKAVAKACARNGFTL 180 (218)
T ss_dssp HHHHHHHHHTT--EEEE----TTT--TTHHHHHHHHHHHHHCT-EE
T ss_pred HHHHHHHHHcCCCeeeEee-cCCc--ccHHHHHHHHHHHHHcCcee
Confidence 3444566788999999763 3343 47889999999999999887
No 244
>cd07939 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and related proteins, catalytic TIM barrel domain. FrbC (NifV) of Streptomyces rubellomurinus catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate and CoA, a reaction similar to one catalyzed by homocitrate synthase. The gene encoding FrbC is one of several genes required for the biosynthesis of FR900098, a potent antimalarial antibiotic. This protein is also required for assembly of the nitrogenase MoFe complex but its exact role is unknown. This family also includes the NifV proteins of Heliobacterium chlorum and Gluconacetobacter diazotrophicus, which appear to be orthologous to FrbC. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarbox
Probab=30.15 E-value=5.6e+02 Score=25.47 Aligned_cols=58 Identities=16% Similarity=0.154 Sum_probs=38.0
Q ss_pred CCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchh
Q psy10113 147 WWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGE 207 (596)
Q Consensus 147 ~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~ 207 (596)
.++.+...++.+.+.+.|++.+.+.- ..-...++++++++...++ ++.++.+|+.|..
T Consensus 135 ~~~~~~~~~~~~~~~~~G~~~i~l~D---T~G~~~P~~v~~lv~~l~~~~~~~l~~H~Hn~~ 193 (259)
T cd07939 135 RADPDFLIEFAEVAQEAGADRLRFAD---TVGILDPFTTYELIRRLRAATDLPLEFHAHNDL 193 (259)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEeCC---CCCCCCHHHHHHHHHHHHHhcCCeEEEEecCCC
Confidence 34455555555555567888764332 2235688899998887764 5788899988754
No 245
>TIGR00126 deoC deoxyribose-phosphate aldolase. Deoxyribose-phosphate aldolase is involved in the catabolism of nucleotides and deoxyriibonucleotides. The catalytic process is as follows: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. It is found in both gram-postive and gram-negative bacteria.
Probab=30.02 E-value=3.7e+02 Score=26.14 Aligned_cols=111 Identities=14% Similarity=0.176 Sum_probs=63.8
Q ss_pred CCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCC
Q psy10113 86 GATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGV 165 (596)
Q Consensus 86 ~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv 165 (596)
...+.+++...+..|...|+-++. +.|. ......+.......+.++-.+|..+... .+....|.++.++ .|+
T Consensus 13 p~~t~~~i~~lc~~A~~~~~~avc--v~p~----~v~~a~~~l~~~~v~v~tVigFP~G~~~-~~~K~~E~~~Av~-~GA 84 (211)
T TIGR00126 13 ADTTEEDIITLCAQAKTYKFAAVC--VNPS----YVPLAKELLKGTEVRICTVVGFPLGAST-TDVKLYETKEAIK-YGA 84 (211)
T ss_pred CCCCHHHHHHHHHHHHhhCCcEEE--eCHH----HHHHHHHHcCCCCCeEEEEeCCCCCCCc-HHHHHHHHHHHHH-cCC
Confidence 356778899999999999998883 3332 2222222222223345555666554433 2334456677665 599
Q ss_pred CEEEEEeecCCC----ccCCHHHHHHHHHHHHhcCCeEEEecCch
Q psy10113 166 NSFKTFMAYKGL----YMLSDGELYDAFSAIKNLGAIAMVHAENG 206 (596)
Q Consensus 166 ~~~k~~~~~~~~----~~~~~~~l~~~~~~a~~~g~~~~vHae~~ 206 (596)
+-+.+.+.+... +..-.+++.++.+.|+ |+++.+=.|.+
T Consensus 85 dEiDvv~n~g~l~~g~~~~v~~ei~~i~~~~~--g~~lKvIlE~~ 127 (211)
T TIGR00126 85 DEVDMVINIGALKDGNEEVVYDDIRAVVEACA--GVLLKVIIETG 127 (211)
T ss_pred CEEEeecchHhhhCCcHHHHHHHHHHHHHHcC--CCeEEEEEecC
Confidence 999888765422 2222345566666554 67666655543
No 246
>PRK07535 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; Validated
Probab=29.44 E-value=6e+02 Score=25.54 Aligned_cols=57 Identities=21% Similarity=0.212 Sum_probs=37.7
Q ss_pred CCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcC
Q psy10113 333 NALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFN 402 (596)
Q Consensus 333 G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lg 402 (596)
|.++.+|.-.-.|..... .+++. ..+....+.++....+++.+-.-+.|..++.+|.
T Consensus 189 g~p~l~G~Sn~Sfglp~r-----------~~in~--~fl~~a~~~Gl~~aI~np~~~~~~~~~~~~~~l~ 245 (261)
T PRK07535 189 KVHTTCGLSNISFGLPNR-----------KLINR--AFLVMAMGAGMDSAILDPLDRDLMGAIAAAEALL 245 (261)
T ss_pred CCCEEEEeCCCccCCcch-----------HHHHH--HHHHHHHHcCCCEEeeCCCCHHHHHHHHHHHHHh
Confidence 888888887766543211 12222 2334455667777888888888888888888764
No 247
>PF05853 DUF849: Prokaryotic protein of unknown function (DUF849); InterPro: IPR008567 This family consists of several hypothetical prokaryotic proteins with no known function.; PDB: 3C6C_A 2Y7G_B 2Y7F_B 2Y7D_D 2Y7E_B 3LOT_A 3FA5_B 3NO5_C 3E02_A 3E49_B ....
Probab=29.20 E-value=4.3e+02 Score=26.76 Aligned_cols=107 Identities=20% Similarity=0.134 Sum_probs=60.0
Q ss_pred ccCCChhHHHHHHHHHHHcCC----CEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcC
Q psy10113 145 ITWWSDQVQQEMAELCEKHGV----NSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAG 220 (596)
Q Consensus 145 ~~~~~~~~~~e~~~lv~~~Gv----~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~G 220 (596)
+.-|+....+....+.++ |. -.+..+++..+....+.+.|...++.... +..+.++..... ........+.+|
T Consensus 144 ~ev~d~~~l~~~~~l~~~-G~l~~p~~~~~vlG~~~g~~~~~~~l~~~l~~l~~-~~~w~v~~~g~~-~~~~~~~Ai~~G 220 (272)
T PF05853_consen 144 IEVFDPGHLRNARRLIEK-GLLPGPLLVNFVLGVPGGMPATPENLLAMLDMLPE-GAPWSVCGIGRN-QWPLLAAAIAMG 220 (272)
T ss_dssp EEESSHHHHHHHHHHHHT-TSS-SSEEEEEEES-TTS--S-HHHHHHHHHHHHH-TEEEEEEE-GGG-HHHHHHHHHHTT
T ss_pred EEEEcHHHHHHHHHHHHC-CCCCCCeEEEEcccCCCCCCCCHHHHHHHHHhcCC-CCcEEEEccchh-hHHHHHHHHHcC
Confidence 334555555555555543 43 34556665545455677778877777777 888888887644 233455556666
Q ss_pred C---CCCCcccCC---ChHHHHHHHHHHHHHHhcccCCCe
Q psy10113 221 I---KGPEGHQLS---RPEEVEAEAVTRACTIANQVDCPL 254 (596)
Q Consensus 221 i---~~~~~~~~~---~p~~~e~~a~~~~i~la~~~~~p~ 254 (596)
. .|-|...+. .+...+++.+.++.++++..+.++
T Consensus 221 ghvRVGlED~~~~~~G~~a~sNaelV~~a~~ia~~~grev 260 (272)
T PF05853_consen 221 GHVRVGLEDNLYLPDGELAPSNAELVERAVRIARELGREV 260 (272)
T ss_dssp -EEEESTTT-SEEETTEE-S-HHHHHHHHHHHHHHTT-EB
T ss_pred CceEEecCccccCCCCCCCcCHHHHHHHHHHHHHHcCCCC
Confidence 4 233322221 122346788889999999999865
No 248
>PRK07315 fructose-bisphosphate aldolase; Provisional
Probab=29.09 E-value=5.2e+02 Score=26.52 Aligned_cols=122 Identities=19% Similarity=0.216 Sum_probs=58.5
Q ss_pred HHHHHHhCCceEEe-ccccCCCCccHHHHHHHHHHHhccC-cee--eeecccc----ccCCCh-hHHHHHHHHHHHcCCC
Q psy10113 96 GTKAAVAGGTTTII-DFALPRKGESLIKTYESWRQKADEK-VCC--DYALHVG----ITWWSD-QVQQEMAELCEKHGVN 166 (596)
Q Consensus 96 g~~~al~~GtTti~-D~~~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~----~~~~~~-~~~~e~~~lv~~~Gv~ 166 (596)
..+.|+..|+|+|. |. ...+.+...+..++..+.+... ..+ ..+--.+ +...+. ...++..+++ +-|++
T Consensus 91 ~i~~ai~~GftSVm~d~-S~l~~eEni~~t~~v~~~a~~~gv~vE~ElG~i~g~ed~~~g~s~~t~peea~~f~-~tgvD 168 (293)
T PRK07315 91 DALECIEVGYTSIMFDG-SHLPVEENLKLAKEVVEKAHAKGISVEAEVGTIGGEEDGIIGKGELAPIEDAKAMV-ETGID 168 (293)
T ss_pred HHHHHHHcCCCEEEEcC-CCCCHHHHHHHHHHHHHHHHHcCCEEEEecCcccCcCccccCccCCCCHHHHHHHH-HcCCC
Confidence 47789999999994 22 1122223333334444444321 111 1111111 111111 2455666666 45999
Q ss_pred EEEEEee-cCCCc-----cCCHHHHHHHHHHHHhc-CCeEEEecCchhhhHHHHHHHHHcCCCC
Q psy10113 167 SFKTFMA-YKGLY-----MLSDGELYDAFSAIKNL-GAIAMVHAENGEIIDKNTQKLLAAGIKG 223 (596)
Q Consensus 167 ~~k~~~~-~~~~~-----~~~~~~l~~~~~~a~~~-g~~~~vHae~~~~i~~~~~~l~~~Gi~~ 223 (596)
.+-+..+ -||.+ .+..+.|.++. +.. ++++..|=-.+ +-.+..+++.+.|+..
T Consensus 169 ~LAv~iG~vHG~y~t~~k~l~~e~L~~i~---~~~~~iPlVlhGGSG-i~~e~~~~~i~~Gi~K 228 (293)
T PRK07315 169 FLAAGIGNIHGPYPENWEGLDLDHLEKLT---EAVPGFPIVLHGGSG-IPDDQIQEAIKLGVAK 228 (293)
T ss_pred EEeeccccccccCCCCCCcCCHHHHHHHH---HhccCCCEEEECCCC-CCHHHHHHHHHcCCCE
Confidence 8876642 23333 23444444443 334 58999994432 2233455555666554
No 249
>PRK08444 hypothetical protein; Provisional
Probab=28.77 E-value=5.8e+02 Score=26.95 Aligned_cols=120 Identities=16% Similarity=0.104 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEec-----------CchhhhHHHHHHHHHcC
Q psy10113 152 VQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHA-----------ENGEIIDKNTQKLLAAG 220 (596)
Q Consensus 152 ~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHa-----------e~~~~i~~~~~~l~~~G 220 (596)
+.+...+. .+.|+..|-+..+.+ ...+.+.+.++++..++.--.+.+|+ ..+-...+..++|.+.|
T Consensus 85 I~~~a~~a-~~~G~~ei~iv~G~~--p~~~~e~y~e~ir~Ik~~~p~i~i~a~s~~Ei~~~a~~~g~~~~e~l~~LkeAG 161 (353)
T PRK08444 85 ILEIVKNS-VKRGIKEVHIVSAHN--PNYGYEWYLEIFKKIKEAYPNLHVKAMTAAEVDFLSRKFGKSYEEVLEDMLEYG 161 (353)
T ss_pred HHHHHHHH-HHCCCCEEEEeccCC--CCCCHHHHHHHHHHHHHHCCCceEeeCCHHHHHHHHHHcCCCHHHHHHHHHHhC
Confidence 44444443 346998887665432 23466778888888887544577787 33444556778999999
Q ss_pred CCCCCcc--cC--------CChHHHHHHHHHHHHHHhcccCCCe----EEEecCcH-HHHHHHHHHHHH
Q psy10113 221 IKGPEGH--QL--------SRPEEVEAEAVTRACTIANQVDCPL----YVVHIMSK-AAGDAMAYKRKE 274 (596)
Q Consensus 221 i~~~~~~--~~--------~~p~~~e~~a~~~~i~la~~~~~p~----~i~hv~s~-~~~~~i~~a~~~ 274 (596)
+..-.|. .. ..|.....+.....+..|++.|.+. .+-|.-+. +.++.+...|+.
T Consensus 162 l~~~~g~~aEi~~~~vr~~I~p~k~~~~~~~~i~~~a~~~Gi~~~sg~l~G~gEt~edrv~hl~~Lr~L 230 (353)
T PRK08444 162 VDSMPGGGAEIFDEEVRKKICKGKVSSERWLEIHKYWHKKGKMSNATMLFGHIENREHRIDHMLRLRDL 230 (353)
T ss_pred cccCCCCCchhcCHHHHhhhCCCCCCHHHHHHHHHHHHHcCCCccceeEEecCCCHHHHHHHHHHHHHh
Confidence 8764441 11 1232222344445556666666554 35555443 445555555544
No 250
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=27.95 E-value=3.5e+02 Score=27.16 Aligned_cols=41 Identities=20% Similarity=0.115 Sum_probs=29.4
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEe
Q psy10113 155 EMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVH 202 (596)
Q Consensus 155 e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vH 202 (596)
..-+.+++.|++++-+ ..++.++..++++.|+++|+....-
T Consensus 108 ~f~~~~~~aGvdGvii-------pDLp~ee~~~~~~~~~~~gl~~I~l 148 (258)
T PRK13111 108 RFAADAAEAGVDGLII-------PDLPPEEAEELRAAAKKHGLDLIFL 148 (258)
T ss_pred HHHHHHHHcCCcEEEE-------CCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 3444445679988754 1356789999999999999876653
No 251
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=27.55 E-value=5.9e+02 Score=26.30 Aligned_cols=50 Identities=20% Similarity=0.146 Sum_probs=30.3
Q ss_pred ccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHH
Q psy10113 335 LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAA 398 (596)
Q Consensus 335 ~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~A 398 (596)
.+.+|||..-.. ..|.|+..+. .++.+.+.+.+ .+++.+++-+++-.|.-
T Consensus 258 hVgiGsDfdg~~------------~~~~gl~~~~-~~~~l~~~L~~-rG~s~~~i~~i~g~N~l 307 (309)
T cd01301 258 HVGLGSDFDGIG------------GTPGGLEDVS-DLPNLTAELLE-RGYSEEEIEKIAGGNFL 307 (309)
T ss_pred eEEECcccCCCC------------CCccccCCHH-HHHHHHHHHHH-cCCCHHHHHHHHhhchh
Confidence 588888863321 2244444433 55666665544 56788888888776654
No 252
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=27.50 E-value=7.5e+02 Score=26.06 Aligned_cols=24 Identities=8% Similarity=0.160 Sum_probs=14.4
Q ss_pred HHHHHHHHHhcccCCCeEEEecCc
Q psy10113 238 EAVTRACTIANQVDCPLYVVHIMS 261 (596)
Q Consensus 238 ~a~~~~i~la~~~~~p~~i~hv~s 261 (596)
+.+.+++...++.+.++.+.-+.+
T Consensus 141 ~~~~~~i~~l~~~g~~v~i~~vv~ 164 (378)
T PRK05301 141 AKKLAVARLVKAHGYPLTLNAVIH 164 (378)
T ss_pred HHHHHHHHHHHHCCCceEEEEEee
Confidence 344456667777777766544443
No 253
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=27.37 E-value=8e+02 Score=26.38 Aligned_cols=20 Identities=20% Similarity=0.306 Sum_probs=15.7
Q ss_pred HHHHHHHhCCceEEeccccC
Q psy10113 95 HGTKAAVAGGTTTIIDFALP 114 (596)
Q Consensus 95 ~g~~~al~~GtTti~D~~~~ 114 (596)
.-.+.|+..|.-||.|....
T Consensus 81 ~K~~~A~~~GADtiMDLStG 100 (423)
T TIGR00190 81 EKALIAIKYGADTVMDLSTG 100 (423)
T ss_pred HHHHHHHHcCCCeEeeccCC
Confidence 34678899999999998443
No 254
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=27.26 E-value=5.5e+02 Score=26.21 Aligned_cols=72 Identities=13% Similarity=0.092 Sum_probs=47.0
Q ss_pred HHHHHH-HHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeE
Q psy10113 183 GELYDA-FSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLY 255 (596)
Q Consensus 183 ~~l~~~-~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~ 255 (596)
+.+... ...|++..+++.+|...+.- .+...+.++.|+++----.-..|-+-+.+.+.++..+|+..|+.+.
T Consensus 60 ~~~~~~~~~~A~~~~VPV~lHLDHg~~-~e~i~~Ai~~GftSVM~DgS~l~~eeNi~~T~~vv~~Ah~~gv~VE 132 (284)
T PRK09195 60 EYLLAIVSAAAKQYHHPLALHLDHHEK-FDDIAQKVRSGVRSVMIDGSHLPFAQNISLVKEVVDFCHRFDVSVE 132 (284)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCC-HHHHHHHHHcCCCEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 344444 44677889999999765532 4567888899987643222223445556777788888887776654
No 255
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=27.09 E-value=6.3e+02 Score=25.02 Aligned_cols=94 Identities=7% Similarity=0.034 Sum_probs=54.1
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCC--ccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCC
Q psy10113 153 QQEMAELCEKHGVNSFKTFMAYKGL--YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLS 230 (596)
Q Consensus 153 ~~e~~~lv~~~Gv~~~k~~~~~~~~--~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~ 230 (596)
.++.-+++++.|...+.++..+... ...+...+.++.+.++++|+.+..+....... +......
T Consensus 15 l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~v~s~~~~~~~~--------------~~~~~~~ 80 (275)
T PRK09856 15 IEHAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETNGY--------------PYNMMLG 80 (275)
T ss_pred HHHHHHHHHHcCCCEEEEccCCccccccccCchHHHHHHHHHHHcCCeEEEecCcccCc--------------CccccCC
Confidence 3344445556799888876432211 12455678888888999999887653210000 0000001
Q ss_pred ChH--HHHHHHHHHHHHHhcccCCCeEEEecC
Q psy10113 231 RPE--EVEAEAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 231 ~p~--~~e~~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
.++ ....+.+.+.+.+|...|++..++|..
T Consensus 81 ~~~~r~~~~~~~~~~i~~a~~lGa~~i~~~~~ 112 (275)
T PRK09856 81 DEHMRRESLDMIKLAMDMAKEMNAGYTLISAA 112 (275)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 111 112467778899999999998877654
No 256
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=27.03 E-value=4.5e+02 Score=24.33 Aligned_cols=90 Identities=13% Similarity=0.097 Sum_probs=52.3
Q ss_pred HHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCCh-HHHHH
Q psy10113 159 LCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRP-EEVEA 237 (596)
Q Consensus 159 lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p-~~~e~ 237 (596)
.+++.|...+.+..............+.++.+.++++|+.+..+........ ......-..+ ..-..
T Consensus 3 ~~~~~G~~~vE~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~~~~~------------~~~~~~~~~~~r~~~~ 70 (213)
T PF01261_consen 3 AAAEAGFDGVELRFDDGQPWDEKDDEAEELRRLLEDYGLKIASLHPPTNFWS------------PDEENGSANDEREEAL 70 (213)
T ss_dssp HHHHTTHSEEEEEHHHHSHHTHHHHHHHHHHHHHHHTTCEEEEEEEEESSSC------------TGTTSTTSSSHHHHHH
T ss_pred HHHHcCCCEEEEecCCCcccccchHHHHHHHHHHHHcCCeEEEEeccccccc------------ccccccCcchhhHHHH
Confidence 3456788888877643221111146788999999999998665432110000 0000000000 12224
Q ss_pred HHHHHHHHHhcccCCCeEEEecC
Q psy10113 238 EAVTRACTIANQVDCPLYVVHIM 260 (596)
Q Consensus 238 ~a~~~~i~la~~~~~p~~i~hv~ 260 (596)
+.+.+.+.+|+..+++..++|..
T Consensus 71 ~~~~~~i~~a~~lg~~~i~~~~g 93 (213)
T PF01261_consen 71 EYLKKAIDLAKRLGAKYIVVHSG 93 (213)
T ss_dssp HHHHHHHHHHHHHTBSEEEEECT
T ss_pred HHHHHHHHHHHHhCCCceeecCc
Confidence 67778999999999999999966
No 257
>PRK06256 biotin synthase; Validated
Probab=26.85 E-value=4.6e+02 Score=27.16 Aligned_cols=74 Identities=18% Similarity=0.197 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCc
Q psy10113 151 QVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEG 226 (596)
Q Consensus 151 ~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~ 226 (596)
++.+++..+. +.|+..|-+..+..+......+.+.++++.+++. ..+.+++..+.+..+..+++.+.|+....+
T Consensus 95 eI~~~~~~~~-~~g~~~~~l~~~g~~p~~~~~~~~~e~i~~i~~~-~~i~~~~~~g~l~~e~l~~LkeaG~~~v~~ 168 (336)
T PRK06256 95 ELIEAAKEAI-EEGAGTFCIVASGRGPSGKEVDQVVEAVKAIKEE-TDLEICACLGLLTEEQAERLKEAGVDRYNH 168 (336)
T ss_pred HHHHHHHHHH-HCCCCEEEEEecCCCCCchHHHHHHHHHHHHHhc-CCCcEEecCCcCCHHHHHHHHHhCCCEEec
Confidence 3444455444 3577665544332221111224677777777764 334445555555667788888999876543
No 258
>PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional
Probab=26.81 E-value=6.7e+02 Score=25.53 Aligned_cols=57 Identities=11% Similarity=-0.003 Sum_probs=38.3
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHh-cC-CeEEEecCchh
Q psy10113 148 WSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKN-LG-AIAMVHAENGE 207 (596)
Q Consensus 148 ~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~-~g-~~~~vHae~~~ 207 (596)
++.+...++.+.+.+.|++.+.+-- ..-..++.+++++++..++ .+ .++.+|+.|..
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~D---T~G~~~P~~v~~lv~~l~~~~~~~~i~~H~Hn~~ 210 (287)
T PRK05692 152 VPPEAVADVAERLFALGCYEISLGD---TIGVGTPGQVRAVLEAVLAEFPAERLAGHFHDTY 210 (287)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecc---ccCccCHHHHHHHHHHHHHhCCCCeEEEEecCCC
Confidence 3455555555555667998764332 2234688999999988775 44 78999988754
No 259
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=26.21 E-value=3.5e+02 Score=23.32 Aligned_cols=51 Identities=16% Similarity=0.186 Sum_probs=31.7
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchh
Q psy10113 154 QEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGE 207 (596)
Q Consensus 154 ~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~ 207 (596)
+++++.++..|...+.+=+.. ..++.+.+.++.+...++..++.+||..+.
T Consensus 47 ~~~~~~a~~~Gl~y~~iPv~~---~~~~~~~v~~f~~~l~~~~~Pvl~hC~sG~ 97 (110)
T PF04273_consen 47 AEEAAAAEALGLQYVHIPVDG---GAITEEDVEAFADALESLPKPVLAHCRSGT 97 (110)
T ss_dssp HCHHHHHHHCT-EEEE----T---TT--HHHHHHHHHHHHTTTTSEEEE-SCSH
T ss_pred HHHHHHHHHcCCeEEEeecCC---CCCCHHHHHHHHHHHHhCCCCEEEECCCCh
Confidence 345566667787765443332 246888888888888888889999998765
No 260
>PRK00507 deoxyribose-phosphate aldolase; Provisional
Probab=25.81 E-value=6.3e+02 Score=24.67 Aligned_cols=113 Identities=16% Similarity=0.143 Sum_probs=61.8
Q ss_pred CCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCC
Q psy10113 86 GATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGV 165 (596)
Q Consensus 86 ~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv 165 (596)
...+.+++...+..|...|+-++. +.|. ......+.......+.++-.+|..+... ......+.++.++ .|+
T Consensus 17 p~~t~~~i~~~~~~A~~~~~~avc--v~p~----~v~~a~~~l~~~~v~v~tVigFP~G~~~-~~~K~~e~~~Ai~-~GA 88 (221)
T PRK00507 17 PEATEEDIDKLCDEAKEYGFASVC--VNPS----YVKLAAELLKGSDVKVCTVIGFPLGANT-TAVKAFEAKDAIA-NGA 88 (221)
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEE--ECHH----HHHHHHHHhCCCCCeEEEEecccCCCCh-HHHHHHHHHHHHH-cCC
Confidence 356788899999999999999983 3332 2222222211122345555666554332 2333456666665 499
Q ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHHh--cCCeEEEecCch
Q psy10113 166 NSFKTFMAYKGLYMLSDGELYDAFSAIKN--LGAIAMVHAENG 206 (596)
Q Consensus 166 ~~~k~~~~~~~~~~~~~~~l~~~~~~a~~--~g~~~~vHae~~ 206 (596)
+.+.+.+.+.....-..+.+++-+..+++ .+..+-+=.|..
T Consensus 89 ~EiD~Vin~~~~~~g~~~~v~~ei~~v~~~~~~~~lKvIlEt~ 131 (221)
T PRK00507 89 DEIDMVINIGALKSGDWDAVEADIRAVVEAAGGAVLKVIIETC 131 (221)
T ss_pred ceEeeeccHHHhcCCCHHHHHHHHHHHHHhcCCceEEEEeecC
Confidence 99888776644333334444444444443 244555544443
No 261
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=25.30 E-value=7.3e+02 Score=25.25 Aligned_cols=73 Identities=15% Similarity=0.103 Sum_probs=47.0
Q ss_pred HHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeE--EEecC
Q psy10113 187 DAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLY--VVHIM 260 (596)
Q Consensus 187 ~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~--i~hv~ 260 (596)
-+...|++...++.+|...+. -.+..++.++.|++..---.-..+.+-..+...+...+++..|+++. +.|+.
T Consensus 65 ~~~~~a~~~~vpv~lHlDH~~-~~e~i~~Al~~G~tsVm~d~s~~~~~eni~~t~~v~~~a~~~gv~veaE~ghlG 139 (281)
T PRK06806 65 LMVAAAKQAKVPVAVHFDHGM-TFEKIKEALEIGFTSVMFDGSHLPLEENIQKTKEIVELAKQYGATVEAEIGRVG 139 (281)
T ss_pred HHHHHHHHCCCCEEEECCCCC-CHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeEC
Confidence 334567788999999986653 24567778888987654332233444445666677777877777654 44554
No 262
>PLN02417 dihydrodipicolinate synthase
Probab=25.28 E-value=6.8e+02 Score=25.24 Aligned_cols=62 Identities=11% Similarity=-0.009 Sum_probs=38.4
Q ss_pred HcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc---CCeEEEecC--chhhhHHHHHHHHHcCCCC
Q psy10113 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKG 223 (596)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~l~~~Gi~~ 223 (596)
+.|++++-+.-.......++.+|-.++++.+.+. .+++.++.. +.....+..+...+.|.++
T Consensus 33 ~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~~~~~~pvi~gv~~~~t~~~i~~a~~a~~~Gada 99 (280)
T PLN02417 33 ENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVIGNTGSNSTREAIHATEQGFAVGMHA 99 (280)
T ss_pred HcCCCEEEECccCcchhhCCHHHHHHHHHHHHHHhCCCCcEEEECCCccHHHHHHHHHHHHHcCCCE
Confidence 4688877655444445567888877777665543 356777753 3444455566677777643
No 263
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=25.21 E-value=5.8e+02 Score=26.23 Aligned_cols=109 Identities=11% Similarity=0.054 Sum_probs=63.5
Q ss_pred CCCCcchHHHHHHHHHhCCceEEeccccCCCCcc----H---HHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHH
Q psy10113 86 GATSVDDFYHGTKAAVAGGTTTIIDFALPRKGES----L---IKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAE 158 (596)
Q Consensus 86 ~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~----~---~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 158 (596)
+..+.+.+..-....+..|+.-++ +.+..|+. . .+.++.+.+....+..+ .+++...+....-++.+
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gi~--v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpv----i~Gv~~~~t~~ai~~a~ 97 (309)
T cd00952 24 DTVDLDETARLVERLIAAGVDGIL--TMGTFGECATLTWEEKQAFVATVVETVAGRVPV----FVGATTLNTRDTIARTR 97 (309)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEE--ECcccccchhCCHHHHHHHHHHHHHHhCCCCCE----EEEeccCCHHHHHHHHH
Confidence 456677777778888899999996 33444432 1 22333344444333222 22333333333445556
Q ss_pred HHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHH-Hhc-CCeEEEe
Q psy10113 159 LCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAI-KNL-GAIAMVH 202 (596)
Q Consensus 159 lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a-~~~-g~~~~vH 202 (596)
.+++.|++.+-+..- ..+..+++++.+-++.. ... ++++.+.
T Consensus 98 ~A~~~Gad~vlv~~P--~y~~~~~~~l~~yf~~va~a~~~lPv~iY 141 (309)
T cd00952 98 ALLDLGADGTMLGRP--MWLPLDVDTAVQFYRDVAEAVPEMAIAIY 141 (309)
T ss_pred HHHHhCCCEEEECCC--cCCCCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 666789998766543 23446778888877664 445 4787776
No 264
>KOG2550|consensus
Probab=24.62 E-value=90 Score=33.32 Aligned_cols=67 Identities=16% Similarity=0.169 Sum_probs=40.4
Q ss_pred EEcCCCEEeeCccccccCCCcccc----------------CCCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHH
Q psy10113 62 IDAAGSYVIPGGIDPHTHFELELM----------------GATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYE 125 (596)
Q Consensus 62 IDa~G~~V~PG~ID~HtHl~~~~~----------------~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~ 125 (596)
.+-++-+|+|||||--++- .++. ..-+.-++.-++..|+.+|++.|--...|+ .-...+.
T Consensus 30 LtynDfliLPg~idF~s~e-VsL~t~ltr~itl~tPlvsSpMDTVtes~MAiaMAl~ggIg~IHhNctpe---~QA~~v~ 105 (503)
T KOG2550|consen 30 LTYNDFLILPGFIDFASDE-VSLQTKLTRNITLNTPLVSSPMDTVTESEMAIAMALLGGIGFIHHNCTPE---DQADMVR 105 (503)
T ss_pred ccccceeeccccccccccc-ceeehhhhhcccccCceeccCCcccchhHHHHHHHhcCCceeeecCCCHH---HHHHHHH
Confidence 5566789999999998873 1111 122333444566778899999995333322 3334456
Q ss_pred HHHHHhc
Q psy10113 126 SWRQKAD 132 (596)
Q Consensus 126 ~~~~~~~ 132 (596)
+|+....
T Consensus 106 ~vK~~~~ 112 (503)
T KOG2550|consen 106 RVKNYEN 112 (503)
T ss_pred HHHHhhc
Confidence 6666554
No 265
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=24.44 E-value=1.4e+02 Score=29.47 Aligned_cols=58 Identities=7% Similarity=-0.081 Sum_probs=37.9
Q ss_pred HHHHHhcCCccEEeCCCCCCChhhhhhCCCCCCcCCCCCcchHHHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCC
Q psy10113 326 LLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLY 404 (596)
Q Consensus 326 l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~ 404 (596)
+....+.|.+++++||...... +.+.+.... +....+++.+++++..+.+|.+++.+-
T Consensus 160 ~~~~~~~g~piiisSdAh~~~~----------------l~~~~~~~~-----l~~~~Gl~~~~~~~~~~~~~~~i~~~~ 217 (237)
T PRK00912 160 LALARKYDFPLVLTSGAMSCYD----------------LRSPREMIA-----LAELFGMEEDEALKALSYYPESIIKKN 217 (237)
T ss_pred HHHHHhcCCCEEEeCCCCcccc----------------cCCHHHHHH-----HHHHcCCCHHHHHHHHHHhHHHHHHhh
Confidence 3334456999999999532211 111122222 334568999999999999999999763
No 266
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=24.40 E-value=6.3e+02 Score=24.52 Aligned_cols=97 Identities=8% Similarity=-0.069 Sum_probs=48.5
Q ss_pred CCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCE
Q psy10113 88 TSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNS 167 (596)
Q Consensus 88 ~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~ 167 (596)
.+.++...-+++++++|++.+- ..+. .....+.++..++....+..+..| .++-.+ .++.++.+ +.|...
T Consensus 22 ~~~~~a~~~~~al~~~Gi~~iE-it~~--~~~a~~~i~~l~~~~~~~p~~~vG---aGTV~~---~~~~~~a~-~aGA~F 91 (213)
T PRK06552 22 ESKEEALKISLAVIKGGIKAIE-VTYT--NPFASEVIKELVELYKDDPEVLIG---AGTVLD---AVTARLAI-LAGAQF 91 (213)
T ss_pred CCHHHHHHHHHHHHHCCCCEEE-EECC--CccHHHHHHHHHHHcCCCCCeEEe---eeeCCC---HHHHHHHH-HcCCCE
Confidence 4556666777788888888882 2222 224555666655543211011111 122222 22333433 346643
Q ss_pred EEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 168 FKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 168 ~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
+ +++..-.++++.|++.|+++.--+.+
T Consensus 92 i-----------vsP~~~~~v~~~~~~~~i~~iPG~~T 118 (213)
T PRK06552 92 I-----------VSPSFNRETAKICNLYQIPYLPGCMT 118 (213)
T ss_pred E-----------ECCCCCHHHHHHHHHcCCCEECCcCC
Confidence 2 12222345666778888777655554
No 267
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [].; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3Q94_A 1RVG_B 1RV8_C 3C4U_A 3C56_B 3C52_A 2FJK_A 3N9R_P 3N9S_A 1GVF_B ....
Probab=24.08 E-value=3e+02 Score=28.13 Aligned_cols=23 Identities=9% Similarity=0.081 Sum_probs=11.9
Q ss_pred CHHHHHHHHHHHHhcCCeEEEec
Q psy10113 181 SDGELYDAFSAIKNLGAIAMVHA 203 (596)
Q Consensus 181 ~~~~l~~~~~~a~~~g~~~~vHa 203 (596)
+.+.+..+++.|.+.+.++.+..
T Consensus 26 n~e~~~avi~AAe~~~sPvIlq~ 48 (287)
T PF01116_consen 26 NLETARAVIEAAEELNSPVILQI 48 (287)
T ss_dssp SHHHHHHHHHHHHHTTS-EEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEc
Confidence 44555555555555555555543
No 268
>TIGR03551 F420_cofH 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit. This enzyme, together with CofG, complete the biosynthesis of 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, the chromophore of coenzyme F420. The chromophore is also used in cyanobacteria DNA photolyases.
Probab=24.01 E-value=4.2e+02 Score=27.69 Aligned_cols=71 Identities=20% Similarity=0.163 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecC-----------chhhhHHHHHHHHHc
Q psy10113 151 QVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAE-----------NGEIIDKNTQKLLAA 219 (596)
Q Consensus 151 ~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae-----------~~~~i~~~~~~l~~~ 219 (596)
++.++++.+. +.|+..|.+..+ ..+....+.+.++++..++.+..+.+++. .+....+..++|.+.
T Consensus 74 eI~e~~~~~~-~~G~~~i~l~gG--~~p~~~~~~~~~i~~~Ik~~~~~i~~~~~t~~ei~~~~~~~g~~~~e~l~~LkeA 150 (343)
T TIGR03551 74 EIAERAAEAW-KAGATEVCIQGG--IHPDLDGDFYLDILRAVKEEVPGMHIHAFSPMEVYYGARNSGLSVEEALKRLKEA 150 (343)
T ss_pred HHHHHHHHHH-HCCCCEEEEEeC--CCCCCCHHHHHHHHHHHHHHCCCceEEecCHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 3444454443 468887765522 12345677888999999987655556653 233345677889999
Q ss_pred CCCCC
Q psy10113 220 GIKGP 224 (596)
Q Consensus 220 Gi~~~ 224 (596)
|+...
T Consensus 151 Gl~~i 155 (343)
T TIGR03551 151 GLDSM 155 (343)
T ss_pred Ccccc
Confidence 98754
No 269
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=23.59 E-value=4.5e+02 Score=28.17 Aligned_cols=80 Identities=19% Similarity=0.181 Sum_probs=50.5
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChH
Q psy10113 154 QEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPE 233 (596)
Q Consensus 154 ~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~ 233 (596)
+.+.++++..|.+..-+- .......+.+++.+.++.-.+..+.+.+|+|...-+ ..
T Consensus 93 ~R~~~ia~~~g~~v~~~~--~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGv------------ln---------- 148 (383)
T COG0075 93 ERFAEIAERYGAEVVVLE--VEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGV------------LN---------- 148 (383)
T ss_pred HHHHHHHHHhCCceEEEe--CCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccc------------cC----------
Confidence 455666666677654332 223346789999999986667788999999875322 21
Q ss_pred HHHHHHHHHHHHHhcccCCCeEEEecCcH
Q psy10113 234 EVEAEAVTRACTIANQVDCPLYVVHIMSK 262 (596)
Q Consensus 234 ~~e~~a~~~~i~la~~~~~p~~i~hv~s~ 262 (596)
-+.....++++++..+.+--++|-
T Consensus 149 -----pl~~I~~~~k~~g~l~iVDaVsS~ 172 (383)
T COG0075 149 -----PLKEIAKAAKEHGALLIVDAVSSL 172 (383)
T ss_pred -----cHHHHHHHHHHcCCEEEEEecccC
Confidence 122344566667777776666653
No 270
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=23.15 E-value=7.6e+02 Score=24.89 Aligned_cols=112 Identities=18% Similarity=0.154 Sum_probs=62.4
Q ss_pred CCCCcchHHHHHHHHHhCCceEEeccccCCCCccH-----HHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHH
Q psy10113 86 GATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESL-----IKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELC 160 (596)
Q Consensus 86 ~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~-----~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv 160 (596)
+..+.+.+..-.+..+..|+..++=.........+ .+.++.+.+.+..+..+..+ +...+-...-++.+.+
T Consensus 17 g~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~g----v~~~st~~~i~~a~~a 92 (289)
T PF00701_consen 17 GSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIAG----VGANSTEEAIELARHA 92 (289)
T ss_dssp SSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEEE----EESSSHHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEec----CcchhHHHHHHHHHHH
Confidence 34566667777888889999998644333222221 22344444444444333333 2232333333555556
Q ss_pred HHcCCCEEEEEeecCCCccCCHHHHHHHHHHH-HhcCCeEEEec
Q psy10113 161 EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAI-KNLGAIAMVHA 203 (596)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a-~~~g~~~~vHa 203 (596)
++.|++.+-+..-| .+..+++++.+-++.. ...++++.++-
T Consensus 93 ~~~Gad~v~v~~P~--~~~~s~~~l~~y~~~ia~~~~~pi~iYn 134 (289)
T PF00701_consen 93 QDAGADAVLVIPPY--YFKPSQEELIDYFRAIADATDLPIIIYN 134 (289)
T ss_dssp HHTT-SEEEEEEST--SSSCCHHHHHHHHHHHHHHSSSEEEEEE
T ss_pred hhcCceEEEEeccc--cccchhhHHHHHHHHHHhhcCCCEEEEE
Confidence 67899987665433 3346888877776554 45578888773
No 271
>cd07938 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropy
Probab=23.01 E-value=7.9e+02 Score=24.79 Aligned_cols=57 Identities=11% Similarity=0.040 Sum_probs=38.2
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc--CCeEEEecCchh
Q psy10113 148 WSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL--GAIAMVHAENGE 207 (596)
Q Consensus 148 ~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~~~vHae~~~ 207 (596)
++.+...++.+.+.+.|+..+.+-- ..-..++.+++++++..++. +.++.+|+.|..
T Consensus 146 ~~~~~~~~~~~~~~~~Ga~~i~l~D---T~G~~~P~~v~~lv~~l~~~~~~~~i~~H~Hnd~ 204 (274)
T cd07938 146 VPPERVAEVAERLLDLGCDEISLGD---TIGVATPAQVRRLLEAVLERFPDEKLALHFHDTR 204 (274)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECC---CCCccCHHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 3445555555555567988765432 22346889999999888765 488999988754
No 272
>COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only]
Probab=22.97 E-value=9.3e+02 Score=25.62 Aligned_cols=81 Identities=16% Similarity=0.203 Sum_probs=42.3
Q ss_pred CCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHH----HH
Q psy10113 87 ATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELC----EK 162 (596)
Q Consensus 87 ~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv----~~ 162 (596)
..+.+.+..-...|+..|++-| |...+-.+...-..+.++... +-+-.+-+..-.+.|.-...++|++.+ ..
T Consensus 30 ~id~~~~~~~i~~aie~GiNyi-dTA~~Yh~g~sE~~lgkaL~~---~~Rekv~LaTKlp~~~~~~~edm~r~fneqLek 105 (391)
T COG1453 30 SIDEENANETIDYAIEHGINYI-DTAWPYHGGESEEFLGKALKD---GYREKVKLATKLPSWPVKDREDMERIFNEQLEK 105 (391)
T ss_pred CccHHHHHHHHHHHHHcCCceE-eecccccCCCchHHHHHHhhh---cccceEEEEeecCCccccCHHHHHHHHHHHHHH
Confidence 3455566667788999999988 555443221222222222111 112333333445556555555665554 34
Q ss_pred cCCCEEEEE
Q psy10113 163 HGVNSFKTF 171 (596)
Q Consensus 163 ~Gv~~~k~~ 171 (596)
.|++.+..|
T Consensus 106 l~~Dy~D~y 114 (391)
T COG1453 106 LGTDYIDYY 114 (391)
T ss_pred hCCchhhhh
Confidence 677776654
No 273
>TIGR00238 KamA family protein. Note that the E. coli homolog was expressed in E. coli and purified and found not to display display lysine 2,3-aminomutase activity. Active site residues are found in 100 residue extension in B. subtilis. Name changed to KamA family protein.
Probab=22.94 E-value=8.7e+02 Score=25.26 Aligned_cols=82 Identities=15% Similarity=0.113 Sum_probs=39.4
Q ss_pred cCCHHHHHHHHHHHHhcC--CeEEEecCch----h-hhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccC
Q psy10113 179 MLSDGELYDAFSAIKNLG--AIAMVHAENG----E-IIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVD 251 (596)
Q Consensus 179 ~~~~~~l~~~~~~a~~~g--~~~~vHae~~----~-~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~ 251 (596)
...+..|.++++..++.. ..+.+|.... . +..+..+.+.+.|+.........+|.++. +.+.+++......|
T Consensus 172 l~~d~~L~~ll~~L~~i~~~~~IRi~tr~~~~~P~rit~el~~~L~~~~~~~~~vsh~nh~~Ei~-~~~~~ai~~L~~aG 250 (331)
T TIGR00238 172 MAKDHELEWLLKRLEEIPHLVRLRIGTRLPVVIPQRITDELCELLASFELQLMLVTHINHCNEIT-EEFAEAMKKLRTVN 250 (331)
T ss_pred cCCHHHHHHHHHHHHhcCCccEEEeecCCCccCchhcCHHHHHHHHhcCCcEEEEccCCChHhCC-HHHHHHHHHHHHcC
Confidence 344555666666665542 1234443221 1 12223333334453322111122344442 45567777777888
Q ss_pred CCeEEEecCc
Q psy10113 252 CPLYVVHIMS 261 (596)
Q Consensus 252 ~p~~i~hv~s 261 (596)
.++.+..+..
T Consensus 251 i~v~~qtvLl 260 (331)
T TIGR00238 251 VTLLNQSVLL 260 (331)
T ss_pred CEEEeecceE
Confidence 8888766663
No 274
>PRK07315 fructose-bisphosphate aldolase; Provisional
Probab=22.90 E-value=7.3e+02 Score=25.44 Aligned_cols=71 Identities=8% Similarity=0.083 Sum_probs=42.0
Q ss_pred HHHHHHH-HHHHhc--CCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeE
Q psy10113 183 GELYDAF-SAIKNL--GAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLY 255 (596)
Q Consensus 183 ~~l~~~~-~~a~~~--g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~ 255 (596)
+.+...+ ..+++. ++++.+|...++ .+..+++++.|++.----.-..|.+-..+...+...+++..++++.
T Consensus 61 ~~~~~~~~~~a~~~~~~vPV~lHLDH~~--~~~i~~ai~~GftSVm~d~S~l~~eEni~~t~~v~~~a~~~gv~vE 134 (293)
T PRK07315 61 KVCKNLIENLVESMGITVPVAIHLDHGH--YEDALECIEVGYTSIMFDGSHLPVEENLKLAKEVVEKAHAKGISVE 134 (293)
T ss_pred HHHHHHHHHHHHHcCCCCcEEEECCCCC--HHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 3344433 355566 669999987663 4466777888877643322223334444566666677766666553
No 275
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=22.88 E-value=6.9e+02 Score=25.01 Aligned_cols=109 Identities=15% Similarity=0.141 Sum_probs=61.5
Q ss_pred CCCCcchHHHHHHHHHhCCceEEeccccCCCCc----cH---HHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHH
Q psy10113 86 GATSVDDFYHGTKAAVAGGTTTIIDFALPRKGE----SL---IKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAE 158 (596)
Q Consensus 86 ~~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~----~~---~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 158 (596)
+..+.+.+..-...++..|+..+.=. +..|+ +. .+.++.+.+....+..+.. ++...+....-++.+
T Consensus 13 g~iD~~~~~~~i~~l~~~Gv~gi~~~--GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~----gv~~~~~~~~i~~a~ 86 (281)
T cd00408 13 GEVDLDALRRLVEFLIEAGVDGLVVL--GTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIA----GVGANSTREAIELAR 86 (281)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEEC--CCCcccccCCHHHHHHHHHHHHHHhCCCCeEEE----ecCCccHHHHHHHHH
Confidence 35666777777888889999998633 33332 12 2234444444432222222 222222222334555
Q ss_pred HHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHh-cCCeEEEe
Q psy10113 159 LCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKN-LGAIAMVH 202 (596)
Q Consensus 159 lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vH 202 (596)
.+++.|++.+-+... ..+..+++++.+.++...+ .++++.++
T Consensus 87 ~a~~~Gad~v~v~pP--~y~~~~~~~~~~~~~~ia~~~~~pi~iY 129 (281)
T cd00408 87 HAEEAGADGVLVVPP--YYNKPSQEGIVAHFKAVADASDLPVILY 129 (281)
T ss_pred HHHHcCCCEEEECCC--cCCCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 566779988765432 3344678888877665544 67888877
No 276
>TIGR02090 LEU1_arch isopropylmalate/citramalate/homocitrate synthases. Methanogens, then should and aparrently do contain all three of these enzymes. Unfortunately, phylogenetic trees do not resolve into three unambiguous clades, making assignment of function to particular genes problematic. Other archaea which lack a threonine dehydratase (mainly Euryarchaeota) should contain both a CimA and a LeuA gene. This is true of, for example, archaeoglobus fulgidis, but not for the Pyrococci which have none in this clade, but one in TIGR00973 and one in TIGRT00977 which may fulfill these roles. Other species which have only one hit to this model and lack threonine dehydratase are very likely LeuA enzymes.
Probab=22.86 E-value=8e+02 Score=25.92 Aligned_cols=77 Identities=14% Similarity=0.106 Sum_probs=48.4
Q ss_pred cCCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHh-cCCeEEEecCchhhhH-HHHHHHHHcCCCC
Q psy10113 146 TWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGEIID-KNTQKLLAAGIKG 223 (596)
Q Consensus 146 ~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~~i~-~~~~~l~~~Gi~~ 223 (596)
+..+.+...++.+.+.+.|++.+.+.-. .-.+++++++++++..++ .++++.+|+.|+.-.. ......++.|++.
T Consensus 136 ~r~~~~~l~~~~~~~~~~g~~~i~l~DT---~G~~~P~~v~~li~~l~~~~~~~l~~H~Hnd~GlA~AN~laA~~aGa~~ 212 (363)
T TIGR02090 136 TRTDIDFLIKVFKRAEEAGADRINIADT---VGVLTPQKMEELIKKLKENVKLPISVHCHNDFGLATANSIAGVKAGAEQ 212 (363)
T ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeCC---CCccCHHHHHHHHHHHhcccCceEEEEecCCCChHHHHHHHHHHCCCCE
Confidence 3445555555555556679987654432 234688899999988875 4688999988764222 2334445667654
Q ss_pred CC
Q psy10113 224 PE 225 (596)
Q Consensus 224 ~~ 225 (596)
.+
T Consensus 213 vd 214 (363)
T TIGR02090 213 VH 214 (363)
T ss_pred EE
Confidence 43
No 277
>PRK08185 hypothetical protein; Provisional
Probab=22.39 E-value=8.4e+02 Score=24.88 Aligned_cols=124 Identities=11% Similarity=0.030 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChh-----------HHHHHHHHHHH
Q psy10113 94 YHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQ-----------VQQEMAELCEK 162 (596)
Q Consensus 94 ~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~e~~~lv~~ 162 (596)
+...+.|+..|+|+|+==...-+-+...+...+..+.+......--+--..+....+. ..++..++++.
T Consensus 81 ~e~i~~ai~~Gf~SVM~D~S~l~~eeNi~~t~~vv~~a~~~gv~vE~ElG~vg~~e~~~~~~~~~~~~t~peea~~f~~~ 160 (283)
T PRK08185 81 IEDVMRAIRCGFTSVMIDGSLLPYEENVALTKEVVELAHKVGVSVEGELGTIGNTGTSIEGGVSEIIYTDPEQAEDFVSR 160 (283)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEEeeccCcccccccccccccCCCHHHHHHHHHh
Q ss_pred cCCCEEEE-----EeecCC--CccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCC
Q psy10113 163 HGVNSFKT-----FMAYKG--LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGI 221 (596)
Q Consensus 163 ~Gv~~~k~-----~~~~~~--~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi 221 (596)
-|++.+-+ .--|+. ...++.+.|.++.+.. ++++..|--.+-. .+..+++.+.|+
T Consensus 161 TgvD~LAvaiGt~HG~y~~~~kp~L~~e~l~~I~~~~---~iPLVlHGgsg~~-~e~~~~ai~~GI 222 (283)
T PRK08185 161 TGVDTLAVAIGTAHGIYPKDKKPELQMDLLKEINERV---DIPLVLHGGSANP-DAEIAESVQLGV 222 (283)
T ss_pred hCCCEEEeccCcccCCcCCCCCCCcCHHHHHHHHHhh---CCCEEEECCCCCC-HHHHHHHHHCCC
No 278
>PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed
Probab=22.37 E-value=9.4e+02 Score=25.42 Aligned_cols=169 Identities=14% Similarity=0.141 Sum_probs=98.1
Q ss_pred HHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCEEEEEeecC
Q psy10113 96 GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYK 175 (596)
Q Consensus 96 g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~ 175 (596)
..+...+.|.--|+=. -+.....+++...++........|..|. . .-.++. .+.|+..+++-.
T Consensus 47 Qi~~L~~aGceiVRva---v~~~~~a~al~~I~~~~~iPlvADIHFd-------~--~lAl~a--~~~G~~~iRINP--- 109 (360)
T PRK00366 47 QIKRLARAGCEIVRVA---VPDMEAAAALPEIKKQLPVPLVADIHFD-------Y--RLALAA--AEAGADALRINP--- 109 (360)
T ss_pred HHHHHHHcCCCEEEEc---cCCHHHHHhHHHHHHcCCCCEEEecCCC-------H--HHHHHH--HHhCCCEEEECC---
Confidence 3455667888888633 2334566777777776654444444432 1 112222 245888776532
Q ss_pred CCccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeE
Q psy10113 176 GLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLY 255 (596)
Q Consensus 176 ~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~ 255 (596)
|...-.++.+.++.+.|++++.++.+-...+.+-.+..++ +|- .+|+.+ .++..+-+.+....++.-.
T Consensus 110 GNig~~~~~v~~vv~~ak~~~ipIRIGvN~GSL~~~~~~~---yg~--------~t~eam-veSAl~~~~~le~~~f~~i 177 (360)
T PRK00366 110 GNIGKRDERVREVVEAAKDYGIPIRIGVNAGSLEKDLLEK---YGE--------PTPEAL-VESALRHAKILEELGFDDI 177 (360)
T ss_pred CCCCchHHHHHHHHHHHHHCCCCEEEecCCccChHHHHHH---cCC--------CCHHHH-HHHHHHHHHHHHHCCCCcE
Confidence 3332237899999999999999999998888765443333 232 234444 3555666777777777544
Q ss_pred EEecCcHHHHHHHHHHHHHHhhcCCceeeEEeeccceeecCCCCCCC
Q psy10113 256 VVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPC 302 (596)
Q Consensus 256 i~hv~s~~~~~~i~~a~~~~~~~G~~~~v~~e~~~~~l~~~~~~~~~ 302 (596)
+..+-+......++..+..- .-. -+|.||+.+++....
T Consensus 178 viS~KsS~v~~~i~ayrlla--~~~-------dyPLHlGvTEAG~~~ 215 (360)
T PRK00366 178 KISVKASDVQDLIAAYRLLA--KRC-------DYPLHLGVTEAGMGF 215 (360)
T ss_pred EEEEEcCCHHHHHHHHHHHH--hcC-------CCCceecccCCCCCC
Confidence 54444444444554443320 011 257788877766543
No 279
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=22.01 E-value=7.6e+02 Score=25.22 Aligned_cols=78 Identities=14% Similarity=0.175 Sum_probs=49.9
Q ss_pred CHHHHHH-HHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCe--EEE
Q psy10113 181 SDGELYD-AFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPL--YVV 257 (596)
Q Consensus 181 ~~~~l~~-~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~--~i~ 257 (596)
..+.+.. +...|++.++++.+|...+. ..+...+.++.|+++----.-..|-+-+.+.+.++..+|+..|+++ .+-
T Consensus 58 g~~~~~~~~~~~A~~~~vPV~lHLDH~~-~~e~i~~Ai~~GftSVM~DgS~l~~eeNi~~T~~vve~Ah~~gv~VEaElG 136 (283)
T PRK07998 58 GYDYIYEIVKRHADKMDVPVSLHLDHGK-TFEDVKQAVRAGFTSVMIDGAALPFEENIAFTKEAVDFAKSYGVPVEAELG 136 (283)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEECcCCC-CHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 3344443 44567788999999976553 2345667788898764322222344445677788888888888877 344
Q ss_pred ec
Q psy10113 258 HI 259 (596)
Q Consensus 258 hv 259 (596)
|+
T Consensus 137 ~v 138 (283)
T PRK07998 137 AI 138 (283)
T ss_pred cC
Confidence 55
No 280
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=21.99 E-value=1.3e+02 Score=32.01 Aligned_cols=44 Identities=11% Similarity=0.021 Sum_probs=36.6
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEec-CchhhhHHHHHHHHHcCCCCCCc
Q psy10113 179 MLSDGELYDAFSAIKNLGAIAMVHA-ENGEIIDKNTQKLLAAGIKGPEG 226 (596)
Q Consensus 179 ~~~~~~l~~~~~~a~~~g~~~~vHa-e~~~~i~~~~~~l~~~Gi~~~~~ 226 (596)
.++.+++..+++.|+++|+++.+|+ +.. +..++..+.|+...++
T Consensus 210 ~~~~e~i~~~v~~A~~~g~~v~sH~~~~~----~~i~~a~~~Gv~~~e~ 254 (383)
T PRK15446 210 RYAPPNRRAIAALARARGIPLASHDDDTP----EHVAEAHALGVAIAEF 254 (383)
T ss_pred hcCHHHHHHHHHHHHHCCCceeecCCCCH----HHHHHHHHcCCceeeC
Confidence 3578999999999999999999999 443 3567788889998873
No 281
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=21.91 E-value=8.5e+02 Score=24.75 Aligned_cols=74 Identities=12% Similarity=0.080 Sum_probs=45.6
Q ss_pred CHHHHHHHH-HHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeE
Q psy10113 181 SDGELYDAF-SAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLY 255 (596)
Q Consensus 181 ~~~~l~~~~-~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~ 255 (596)
..+.+...+ ..|++...++.+|...+.- .+...+.++.|+++.---.-..|-+-+.+.+.+...+|+..|+.+.
T Consensus 53 ~~~~~~~~~~~~a~~~~VPV~lHLDH~~~-~~~i~~ai~~GftSVMiD~S~l~~eeNi~~t~~vv~~ah~~gv~VE 127 (276)
T cd00947 53 GLELLVAMVKAAAERASVPVALHLDHGSS-FELIKRAIRAGFSSVMIDGSHLPFEENVAKTKEVVELAHAYGVSVE 127 (276)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEECCCCCC-HHHHHHHHHhCCCEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 344455444 4566779999999765531 3455677888877643222223455555666777777777766654
No 282
>PF15585 Imm46: Immunity protein 46
Probab=21.83 E-value=66 Score=28.54 Aligned_cols=51 Identities=20% Similarity=0.328 Sum_probs=36.0
Q ss_pred HcCCCCCcccccCCCCccEEEEcCCcceeecCCCccCCCCCCcccCeEeeeeEEEEEECCEEEEECCcee
Q psy10113 400 IFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLR 469 (596)
Q Consensus 400 ~lgl~~~~G~I~~G~~ADlVi~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi~~GrvV~~dG~~~ 469 (596)
++.++.++|+|+||+.-=|=++|.+.+ ..+|-| -+.|+++|++-.++..++
T Consensus 70 ii~lf~~i~e~aPGSYGlLy~rDDEd~-----------~~~neF--------rV~vl~RG~~te~~D~~L 120 (129)
T PF15585_consen 70 IIELFERIAEIAPGSYGLLYIRDDEDP-----------EHFNEF--------RVFVLARGELTEQRDPFL 120 (129)
T ss_pred HHHHHHHHHHhCCCceeEEEEecCCCC-----------CCCCce--------EEEEEEccEEeeccCCCc
Confidence 444556789999999999999997632 112333 248899999888776653
No 283
>PF00248 Aldo_ket_red: Aldo/keto reductase family; InterPro: IPR023210 The aldo-keto reductase family includes a number of related monomeric NADPH-dependent oxidoreductases, such as aldehyde reductase, aldose reductase, prostaglandin F synthase, xylose reductase, rho crystallin, and many others []. All possess a similar structure, with a beta-alpha-beta fold characteristic of nucleotide binding proteins []. The fold comprises a parallel beta-8/alpha-8-barrel, which contains a novel NADP-binding motif. The binding site is located in a large, deep, elliptical pocket in the C-terminal end of the beta sheet, the substrate being bound in an extended conformation. The hydrophobic nature of the pocket favours aromatic and apolar substrates over highly polar ones []. Binding of the NADPH coenzyme causes a massive conformational change, reorienting a loop, effectively locking the coenzyme in place. This binding is more similar to FAD- than to NAD(P)-binding oxidoreductases []. Some proteins of this entry contain a K+ ion channel beta chain regulatory domain; these are reported to have oxidoreductase activity []. This entry represents the NADP-dependent oxidoreductase domain found in these proteins.; PDB: 1C9W_A 4F40_B 1VBJ_A 1XGD_A 1X97_A 2ACS_A 1EF3_A 2ACU_A 1PWM_A 2NVD_A ....
Probab=21.81 E-value=7.9e+02 Score=24.34 Aligned_cols=118 Identities=14% Similarity=0.101 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHH---hccCceeeeec---cccccCCC-hhHHHHHHHH
Q psy10113 87 ATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQK---ADEKVCCDYAL---HVGITWWS-DQVQQEMAEL 159 (596)
Q Consensus 87 ~~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~---~~~~~~~~-~~~~~e~~~l 159 (596)
..+.+......+.|+..|++.+ |+...-........+.++... ......+..-+ .......+ +.+.+.+++.
T Consensus 13 ~~~~~~~~~~l~~a~~~Gin~~-DtA~~Y~~g~sE~~lg~~l~~~~~~r~~~~i~tK~~~~~~~~~~~~~~~i~~~~~~s 91 (283)
T PF00248_consen 13 RVSEEEAEAILRRALEAGINFF-DTADSYGNGRSERILGRALRKSRVPRDDIFISTKVYGDGKPEPDYSPDSIRESLERS 91 (283)
T ss_dssp TSTHHHHHHHHHHHHHTT--EE-EECGGGGGGTHHHHHHHHHHHTSSTGGGSEEEEEEESSSSTGGGSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCee-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4566777788899999999987 543211111223334443333 11111111111 00112222 3456677777
Q ss_pred HHHcCCCEEEEEeecCCCccCC-HHHHHHHHHHHHhcCCeEEEecCc
Q psy10113 160 CEKHGVNSFKTFMAYKGLYMLS-DGELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 160 v~~~Gv~~~k~~~~~~~~~~~~-~~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
.+..|++.+.+++--.-..... .+++.+.++.+++.|..-.+-..+
T Consensus 92 L~~L~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 138 (283)
T PF00248_consen 92 LERLGTDYIDLLLLHWPDPSEDALEEVWEALEELKKEGKIRHIGVSN 138 (283)
T ss_dssp HHHHTSSSEEEEEESSSSTTSSHHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred cccccccchhccccccccccccccchhhhhhhhcccccccccccccc
Confidence 7778999888776422222334 778888899999999877776555
No 284
>KOG4549|consensus
Probab=21.77 E-value=2.1e+02 Score=25.48 Aligned_cols=22 Identities=18% Similarity=0.276 Sum_probs=17.3
Q ss_pred CCeEEEcCCCEEeeCccccccCC
Q psy10113 58 GVRVIDAAGSYVIPGGIDPHTHF 80 (596)
Q Consensus 58 ~~~vIDa~G~~V~PG~ID~HtHl 80 (596)
.+-.+|+. ..|.|=+||.|.|.
T Consensus 6 ~~~~fdld-ytiwP~~vdthl~~ 27 (144)
T KOG4549|consen 6 EAMQFDLD-YTIWPRLVDTHLDY 27 (144)
T ss_pred ceeEEecc-ceeeeEEEEecccc
Confidence 34466665 68999999999997
No 285
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain. Citramalate synthase (CMS) catalyzes the conversion of pyruvate and acetyl-CoA to (R)-citramalate in the first dedicated step of the citramalate pathway. Citramalate is only found in Leptospira interrogans and a few other microorganisms. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center con
Probab=21.68 E-value=8.5e+02 Score=24.67 Aligned_cols=109 Identities=13% Similarity=0.008 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCceEEeccccCCCC-----------ccHHHHHHHHHHHhccCceeeeecccccc---CCChhHHHHHHHH
Q psy10113 94 YHGTKAAVAGGTTTIIDFALPRKG-----------ESLIKTYESWRQKADEKVCCDYALHVGIT---WWSDQVQQEMAEL 159 (596)
Q Consensus 94 ~~g~~~al~~GtTti~D~~~~~~~-----------~~~~~a~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~~~l 159 (596)
..+...|++.|+..|.=+...+.. +.+....+..+.....+..+.+++.. .. ..+.+...++.+.
T Consensus 77 ~~~~~~A~~~g~~~i~i~~~~S~~h~~~~~~~t~~e~l~~~~~~i~~a~~~G~~v~~~~~d-~~~~~r~~~~~~~~~~~~ 155 (280)
T cd07945 77 DKSVDWIKSAGAKVLNLLTKGSLKHCTEQLRKTPEEHFADIREVIEYAIKNGIEVNIYLED-WSNGMRDSPDYVFQLVDF 155 (280)
T ss_pred HHHHHHHHHCCCCEEEEEEeCCHHHHHHHHCcCHHHHHHHHHHHHHHHHhCCCEEEEEEEe-CCCCCcCCHHHHHHHHHH
Q ss_pred HHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc--CCeEEEecCch
Q psy10113 160 CEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL--GAIAMVHAENG 206 (596)
Q Consensus 160 v~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~~~vHae~~ 206 (596)
+.+.|+..+.+.- ..-..++.+++++++..++. +.++.+|+.|.
T Consensus 156 ~~~~G~~~i~l~D---T~G~~~P~~v~~l~~~l~~~~~~~~i~~H~Hnd 201 (280)
T cd07945 156 LSDLPIKRIMLPD---TLGILSPFETYTYISDMVKRYPNLHFDFHAHND 201 (280)
T ss_pred HHHcCCCEEEecC---CCCCCCHHHHHHHHHHHHhhCCCCeEEEEeCCC
No 286
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=21.36 E-value=90 Score=21.51 Aligned_cols=16 Identities=25% Similarity=0.565 Sum_probs=13.0
Q ss_pred eeEEEECCeEEEeccC
Q psy10113 37 LDIYIENGVIQQLGRN 52 (596)
Q Consensus 37 ~dV~IedG~I~~Ig~~ 52 (596)
-.|.|+||+|++|..+
T Consensus 18 V~iiiqdG~vvQIe~~ 33 (38)
T PF10055_consen 18 VTIIIQDGRVVQIEKT 33 (38)
T ss_pred EEEEEECCEEEEEEhh
Confidence 4577899999999864
No 287
>cd07940 DRE_TIM_IPMS 2-isopropylmalate synthase (IPMS), N-terminal catalytic TIM barrel domain. 2-isopropylmalate synthase (IPMS) catalyzes an aldol-type condensation of acetyl-CoA and 2-oxoisovalerate yielding 2-isopropylmalate and CoA, the first committed step in leucine biosynthesis. This family includes the Arabidopsis thaliana IPMS1 and IPMS2 proteins, the Glycine max GmN56 protein, and the Brassica insularis BatIMS protein. This family also includes a group of archeal IPMS-like proteins represented by the Methanocaldococcus jannaschii AksA protein. AksA catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate, one of 13 steps in the conversion of alpha-ketoglutarate and acetylCoA to alpha-ketosuberate, a precursor to coenzyme B and biotin. AksA also catalyzes the condensation of alpha-ketoadipate or alpha-ketopimelate with acetylCoA to form, respectively, the (R)-homocitrate homologs (R)-2-hydroxy-1,2,5-pentanetricarboxylic acid and (R)-2-h
Probab=21.26 E-value=8.3e+02 Score=24.38 Aligned_cols=58 Identities=16% Similarity=0.067 Sum_probs=39.4
Q ss_pred CCChhHHHHHHHHHHHcCCCEEEEEeecCCCccCCHHHHHHHHHHHHhc-C---CeEEEecCchh
Q psy10113 147 WWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL-G---AIAMVHAENGE 207 (596)
Q Consensus 147 ~~~~~~~~e~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~-g---~~~~vHae~~~ 207 (596)
..+.+...++.+.+.+.|+..+.+.- ..-.+++++++++++..++. + +++.+|+.|..
T Consensus 139 ~~~~~~~~~~~~~~~~~G~~~i~l~D---T~G~~~P~~v~~lv~~l~~~~~~~~i~l~~H~Hn~~ 200 (268)
T cd07940 139 RTDLDFLIEVVEAAIEAGATTINIPD---TVGYLTPEEFGELIKKLKENVPNIKVPISVHCHNDL 200 (268)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECC---CCCCCCHHHHHHHHHHHHHhCCCCceeEEEEecCCc
Confidence 34556555565555667988764332 22357899999999988874 4 78899988754
No 288
>PLN02858 fructose-bisphosphate aldolase
Probab=20.96 E-value=8.3e+02 Score=31.03 Aligned_cols=70 Identities=13% Similarity=0.251 Sum_probs=44.0
Q ss_pred HHHHHHHHHHcCCCEEEEEee-cCCC-----ccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCC
Q psy10113 153 QQEMAELCEKHGVNSFKTFMA-YKGL-----YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKG 223 (596)
Q Consensus 153 ~~e~~~lv~~~Gv~~~k~~~~-~~~~-----~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~ 223 (596)
.++..+++++-|++.+-+..+ -||. ..++.+.|+++-+.....++++..|--.+-. .+..++..+.|+.-
T Consensus 1252 p~~a~~Fv~~TgvD~LAvaiGt~HG~Y~~~~p~l~~~~l~~i~~~~~~~~vpLVlHGgSG~~-~~~~~~ai~~Gi~K 1327 (1378)
T PLN02858 1252 VDQAKEFIDETGIDALAVCIGNVHGKYPASGPNLRLDLLKELRALSSKKGVLLVLHGASGLP-ESLIKECIENGVRK 1327 (1378)
T ss_pred HHHHHHHHHhcCCcEEeeecccccccCCCCCCccCHHHHHHHHHHhcCCCCcEEEeCCCCCC-HHHHHHHHHcCCeE
Confidence 467777887779988876553 2333 3456666666666665558999999554421 34455666666543
No 289
>TIGR02090 LEU1_arch isopropylmalate/citramalate/homocitrate synthases. Methanogens, then should and aparrently do contain all three of these enzymes. Unfortunately, phylogenetic trees do not resolve into three unambiguous clades, making assignment of function to particular genes problematic. Other archaea which lack a threonine dehydratase (mainly Euryarchaeota) should contain both a CimA and a LeuA gene. This is true of, for example, archaeoglobus fulgidis, but not for the Pyrococci which have none in this clade, but one in TIGR00973 and one in TIGRT00977 which may fulfill these roles. Other species which have only one hit to this model and lack threonine dehydratase are very likely LeuA enzymes.
Probab=20.67 E-value=9e+02 Score=25.53 Aligned_cols=107 Identities=18% Similarity=0.193 Sum_probs=61.9
Q ss_pred CCcchHHHHHHHHHhCCceEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHHHHHHcCCCE
Q psy10113 88 TSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNS 167 (596)
Q Consensus 88 ~~~d~~~~g~~~al~~GtTti~D~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~lv~~~Gv~~ 167 (596)
++.++-..-++...+.|+..|- ..++...+.-.+.++...+... ...+. .|.....++++.++ +.|+..
T Consensus 19 ~s~~~k~~ia~~L~~~Gv~~IE-vG~p~~~~~~~e~i~~i~~~~~---~~~v~------~~~r~~~~di~~a~-~~g~~~ 87 (363)
T TIGR02090 19 LTVEQKVEIARKLDELGVDVIE-AGFPIASEGEFEAIKKISQEGL---NAEIC------SLARALKKDIDKAI-DCGVDS 87 (363)
T ss_pred CCHHHHHHHHHHHHHcCCCEEE-EeCCCCChHHHHHHHHHHhcCC---CcEEE------EEcccCHHHHHHHH-HcCcCE
Confidence 4455555566777889998883 4444443334444444443322 11121 22223355666665 469998
Q ss_pred EEEEeecCCC-----ccCCH----HHHHHHHHHHHhcCCeEEEecCc
Q psy10113 168 FKTFMAYKGL-----YMLSD----GELYDAFSAIKNLGAIAMVHAEN 205 (596)
Q Consensus 168 ~k~~~~~~~~-----~~~~~----~~l~~~~~~a~~~g~~~~vHae~ 205 (596)
+.+|..-... ...+. +.+.+.++.|++.|..+.+.++.
T Consensus 88 i~i~~~~Sd~~~~~~~~~~~~~~~~~~~~~i~~ak~~G~~v~~~~ed 134 (363)
T TIGR02090 88 IHTFIATSPIHLKYKLKKSRDEVLEKAVEAVEYAKEHGLIVEFSAED 134 (363)
T ss_pred EEEEEcCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEEEee
Confidence 8888753211 12343 44667888999999999888754
No 290
>PRK11572 copper homeostasis protein CutC; Provisional
Probab=20.62 E-value=8.6e+02 Score=24.32 Aligned_cols=128 Identities=15% Similarity=0.010 Sum_probs=69.5
Q ss_pred HHHHHHHhCCceEEecccc-CCCC-ccHHHHHHHHHHHhccCceeeeeccccccCCChhHHHHHHH---HHHHcCCCEEE
Q psy10113 95 HGTKAAVAGGTTTIIDFAL-PRKG-ESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAE---LCEKHGVNSFK 169 (596)
Q Consensus 95 ~g~~~al~~GtTti~D~~~-~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~---lv~~~Gv~~~k 169 (596)
..+..|.++|-.-|-=+.. ...| .+....++..++.......+-.-.+.+.--+++...+.|.+ ++++.|+++|-
T Consensus 12 ~~a~~A~~~GAdRiELc~~L~~GGlTPS~g~i~~~~~~~~ipv~vMIRPR~gdF~Ys~~E~~~M~~di~~~~~~GadGvV 91 (248)
T PRK11572 12 ECALTAQQAGADRIELCAAPKEGGLTPSLGVLKSVRERVTIPVHPIIRPRGGDFCYSDGEFAAMLEDIATVRELGFPGLV 91 (248)
T ss_pred HHHHHHHHcCCCEEEEccCcCCCCcCCCHHHHHHHHHhcCCCeEEEEecCCCCCCCCHHHHHHHHHHHHHHHHcCCCEEE
Confidence 3466777788777631111 1111 12233445544444433444444443333345544444443 33567998875
Q ss_pred EEeecCCCccCCHHHHHHHHHHHHhcCCeEEEec-Cch-hhhHHHHHHHHHcCCCCCC
Q psy10113 170 TFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHA-ENG-EIIDKNTQKLLAAGIKGPE 225 (596)
Q Consensus 170 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHa-e~~-~~i~~~~~~l~~~Gi~~~~ 225 (596)
... ......++.+.+.++++.|. +++++.|- .+. .-..+..+.+.+.|++...
T Consensus 92 ~G~-L~~dg~vD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~al~~l~~lG~~rIL 146 (248)
T PRK11572 92 TGV-LDVDGHVDMPRMRKIMAAAG--PLAVTFHRAFDMCANPLNALKQLADLGVARIL 146 (248)
T ss_pred Eee-ECCCCCcCHHHHHHHHHHhc--CCceEEechhhccCCHHHHHHHHHHcCCCEEE
Confidence 432 22334578888999999984 78889992 211 1123467778888876544
No 291
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=20.53 E-value=8.3e+02 Score=24.11 Aligned_cols=56 Identities=16% Similarity=0.143 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhcCCeEE-EecCchh---hhHHHHHHHHHcCCCCCCcccCCChHHHHHHHHHHHHHHhcccCCCeEEEec
Q psy10113 184 ELYDAFSAIKNLGAIAM-VHAENGE---IIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHI 259 (596)
Q Consensus 184 ~l~~~~~~a~~~g~~~~-vHae~~~---~i~~~~~~l~~~Gi~~~~~~~~~~p~~~e~~a~~~~i~la~~~~~p~~i~hv 259 (596)
.+.+.++.|+.+|+... +|+-... ...+..+. -.+.+.+...+|++.|+.+.+..+
T Consensus 91 ~~~~~i~~a~~lGa~~i~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~l~~~a~~~gv~l~iE~~ 150 (275)
T PRK09856 91 MIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGR--------------------LAENLSELCEYAENIGMDLILEPL 150 (275)
T ss_pred HHHHHHHHHHHhCCCEEEEcCCCCCCCCCHHHHHHH--------------------HHHHHHHHHHHHHHcCCEEEEecC
Confidence 56677788888888774 4432110 00011111 135667777788888887776543
No 292
>TIGR00542 hxl6Piso_put hexulose-6-phosphate isomerase, putative. This family is conserved at better than 40 % identity among the four known examples from three species: Escherichia coli (SgbU and SgaU), Haemophilus influenzae, and Mycoplasma pneumoniae. The rarity of the family, high level of conservation, and proposed catabolic role suggests lateral transfer may be a part of the evolutionary history of this protein.
Probab=20.18 E-value=8.6e+02 Score=24.17 Aligned_cols=90 Identities=12% Similarity=0.040 Sum_probs=54.2
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCC----CccCCHHHHHHHHHHHHhcCCeEEEecCchhhhHHHHHHHHHcCCCCCCccc
Q psy10113 153 QQEMAELCEKHGVNSFKTFMAYKG----LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQ 228 (596)
Q Consensus 153 ~~e~~~lv~~~Gv~~~k~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~l~~~Gi~~~~~~~ 228 (596)
..+.-+++++.|.+.+-+.+.... ....+.+++.++.+.+++.|+.+..=+.... ....
T Consensus 18 ~~e~l~~~~~~G~~~VEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~-----------------~~~~ 80 (279)
T TIGR00542 18 WLERLQLAKTCGFDFVEMSVDETDDRLSRLDWSREQRLALVNAIIETGVRIPSMCLSAH-----------------RRFP 80 (279)
T ss_pred HHHHHHHHHHcCCCEEEEecCCccchhhccCCCHHHHHHHHHHHHHcCCCceeeecCCC-----------------ccCc
Confidence 344455566789998887765322 1234678888888999999988753321100 0000
Q ss_pred CC--ChH--HHHHHHHHHHHHHhcccCCCeEEEec
Q psy10113 229 LS--RPE--EVEAEAVTRACTIANQVDCPLYVVHI 259 (596)
Q Consensus 229 ~~--~p~--~~e~~a~~~~i~la~~~~~p~~i~hv 259 (596)
+. .++ ....+.+.+++.++...|++..+.+.
T Consensus 81 l~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~ 115 (279)
T TIGR00542 81 LGSKDKAVRQQGLEIMEKAIQLARDLGIRTIQLAG 115 (279)
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEecC
Confidence 00 111 11235677889999999999776654
Done!