RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10113
(596 letters)
>d1kcxa2 c.1.9.6 (A:67-400) Dihydropyrimidinase related protein-1
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 334
Score = 265 bits (677), Expect = 2e-84
Identities = 170/338 (50%), Positives = 228/338 (67%), Gaps = 5/338 (1%)
Query: 71 PGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQK 130
PGGID +T+ + G TS DDF+ GTKAA+AGGTT IID +P G SL+ ++E W +
Sbjct: 1 PGGIDVNTYLQKPSQGMTSADDFFQGTKAALAGGTTMIIDHVVPEPGSSLLTSFEKWHEA 60
Query: 131 ADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFS 190
AD K CCDY+LHV IT W D V++E+ L + GVNSF+ +MAYK LY +SD +LY+AF+
Sbjct: 61 ADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDLYQMSDSQLYEAFT 120
Query: 191 AIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQV 250
+K LGA+ +VHAENG++I + +++L GI GPEGH LSRPEE+EAEAV RA IA ++
Sbjct: 121 FLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAIAIAGRI 180
Query: 251 DCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAH 310
+CP+Y+ +MSK+A D +A RK+ + W AA
Sbjct: 181 NCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGT-----DGTHYWSKNWAKAAAF 235
Query: 311 VLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDR 370
V SPPL PD TTP +L +LL LQ TGS +C ++ QK +GKD+FT IP GVNG+++R
Sbjct: 236 VTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEER 295
Query: 371 LSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKG 408
++V+W+K V G + +FVAVTSTNAAKIFNLYP+KG
Sbjct: 296 MTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKG 333
>d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2
{Dictyostelium discoideum [TaxId: 44689]}
Length = 334
Score = 259 bits (662), Expect = 3e-82
Identities = 175/338 (51%), Positives = 228/338 (67%), Gaps = 5/338 (1%)
Query: 71 PGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQK 130
PGGID HTHF+L MG SVDDF GT+AAVAGGTT IIDF +P +G+SL++ Y+ W++
Sbjct: 1 PGGIDTHTHFQLPFMGTVSVDDFDIGTQAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKW 60
Query: 131 ADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFS 190
ADEKV CDY+LHV ITWWS+QV +EM L ++ GVNSFK FMAYK +M++D E+Y F
Sbjct: 61 ADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSFKCFMAYKNSFMVTDQEMYHIFK 120
Query: 191 AIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQV 250
K LGAIA VHAENG+++ + +K+L GI GPEGH+LSRPE +EAEA RA IA+ V
Sbjct: 121 RCKELGAIAQVHAENGDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSV 180
Query: 251 DCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAH 310
P+Y+VH+ S A D + RKE ++ G + ++ W AA
Sbjct: 181 CTPVYIVHVQSIGAADVICKHRKEGVRVYGEPIAAGLGV-----DGSHMWNHDWRHAAAF 235
Query: 311 VLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDR 370
V+ PP+RPD T L+ L L G+DNCTF +QK +GKD FT IPNGVNGV+DR
Sbjct: 236 VMGPPIRPDPRTKGVLMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDR 295
Query: 371 LSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKG 408
+S++WE GV G L+ +FV TS+ A+IFN+YP+KG
Sbjct: 296 MSIVWENGVNTGKLTWCQFVRATSSERARIFNIYPRKG 333
>d1ynya2 c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR9 [TaxId:
301298]}
Length = 332
Score = 242 bits (619), Expect = 5e-76
Identities = 137/338 (40%), Positives = 192/338 (56%), Gaps = 8/338 (2%)
Query: 72 GGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKA 131
GGIDPHTH ++ G + DDF+ GT+AA GGTT+I+DF L +KGESL +W +KA
Sbjct: 1 GGIDPHTHLDMPFGGTVTADDFFTGTRAAAFGGTTSIVDFCLTKKGESLKSAIATWHEKA 60
Query: 132 DEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSA 191
K DY H+ I +DQV +E+ + G+ S K FMAYK ++ D L+
Sbjct: 61 RGKAVIDYGFHLMIAEANDQVLEELESVISSEGITSLKVFMAYKNVFQADDETLFKTLVK 120
Query: 192 IKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVD 251
K LGA+ VHAENG+++D T+K LA G P H +RP E E EA RA +
Sbjct: 121 AKELGALVQVHAENGDVLDYLTKKALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALAG 180
Query: 252 CPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHV 311
LYVVH+ +A +A R+ K +YGET + + + + A +V
Sbjct: 181 SQLYVVHVSCASAVQRIAEARE------KGWNVYGETCPQYLALDVSIMDQPDFEGAKYV 234
Query: 312 LSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFN-KNQKELGKDSFTHIPNGVNGVQDR 370
SPPLR L + L LQT GSD+C FN + QKELG+ FT IPNG ++DR
Sbjct: 235 WSPPLREKW-NQEVLWSALKNGILQTVGSDHCPFNFRGQKELGRGDFTKIPNGGPLIEDR 293
Query: 371 LSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKG 408
L++++ +GV G +S +FV ++ST AAK+F ++P+KG
Sbjct: 294 LTILYSEGVRQGRISLNQFVDISSTKAAKLFGMFPRKG 331
>d1nfga2 c.1.9.6 (A:52-381) D-hydantoinase {Burkholderia pickettii
[TaxId: 329]}
Length = 330
Score = 234 bits (597), Expect = 8e-73
Identities = 114/338 (33%), Positives = 169/338 (50%), Gaps = 10/338 (2%)
Query: 72 GGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKA 131
GGID HTH E S D F T AA GGTTTI+DF +G SL + W A
Sbjct: 1 GGIDVHTHVETVSFNTQSADTFATATVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMA 60
Query: 132 DEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSA 191
K DY H+ + +D V +E+ G+ SFK FMAY+G+ M+ D L
Sbjct: 61 GGKSAIDYGYHIIVLDPTDSVIEELEV-LPDLGITSFKVFMAYRGMNMIDDVTLLKTLDK 119
Query: 192 IKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVD 251
G++ MVHAENG+ D K +A G P H LSRP VEAEA RA +A V+
Sbjct: 120 AVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVN 179
Query: 252 CPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHV 311
P+Y+VH+ + + + + + ++ + L + + A +V
Sbjct: 180 APIYIVHVTCEESLEEVMRAKSRGVRALAETCTHYLYL------TKEDLERPDFEGAKYV 233
Query: 312 LSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFN-KNQKELGKDSFTHIPNGVNGVQDR 370
+PP R + L L +T SD+C++ K K+ G++ F IPNG GV++R
Sbjct: 234 FTPPAR-AKKDHDVLWNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEER 292
Query: 371 LSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKG 408
L ++++ GV G +S +FV + +T AK+F ++P+KG
Sbjct: 293 LMMVYQ-GVNEGRISLTQFVELVATRPAKVFGMFPQKG 329
>d1gkpa2 c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [TaxId:
275]}
Length = 335
Score = 230 bits (586), Expect = 4e-71
Identities = 121/342 (35%), Positives = 182/342 (53%), Gaps = 8/342 (2%)
Query: 74 IDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADE 133
IDPH H L M + D G+KAA+ GGTTT I+ P + + ++ Y+ W+ KA+
Sbjct: 2 IDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEG 61
Query: 134 KVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIK 193
CDY H+ ++ + ++ + ++ E+ ++SFK F++YK + + DGE+Y K
Sbjct: 62 NSYCDYTFHMAVSKFDEKTEGQLREIVADG-ISSFKIFLSYKNFFGVDDGEMYQTLRLAK 120
Query: 194 NLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCP 253
LG I H EN E++ + QKLL+ G GPE H+ SRPE VEAE R T
Sbjct: 121 ELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGAT 180
Query: 254 LYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLS 313
YVVH+ K A DA + + + L + +++S
Sbjct: 181 GYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLL------DKTYAERGGVEAMKYIMS 234
Query: 314 PPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSV 373
PPLR D+ L L + + T G+D+C F+ QK LGK++FT IPNG+ ++DR+++
Sbjct: 235 PPLR-DKRNQKVLWDALAQGFIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNL 293
Query: 374 IWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSD 415
++ GV G L +FV ST AAK+F L+P+KG IA GSD
Sbjct: 294 LYTYGVSRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAVGSD 335
>d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2
{Yeast (Saccharomyces kluyveri) [TaxId: 4934]}
Length = 384
Score = 217 bits (552), Expect = 2e-65
Identities = 106/385 (27%), Positives = 173/385 (44%), Gaps = 50/385 (12%)
Query: 72 GGIDPHTHFELE-LMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKT-----YE 125
GGID H H + + VD H T++AVAGGTTT++ F+ +
Sbjct: 1 GGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKL 60
Query: 126 SWRQKADEKVCCDYALHVGITWWSDQ-------VQQEMAELCEKHGVNSFKTFMAYKGLY 178
+ +++ + CDY LH+ + + ++ +GV+S K FM Y GL
Sbjct: 61 DVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPGL- 119
Query: 179 MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAE 238
+SD ++ A A + G M+HAENG+++ + L G+ H +SRP VE E
Sbjct: 120 QISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGE 179
Query: 239 AVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKE--------------LMKKGKHCTL 284
A RA T+A +D P+ VH+ S A + + + + L C
Sbjct: 180 ATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHH 239
Query: 285 YGETLAAAVGTHANQI-------PCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQT 337
+GE + VG + I P + ++ SPP+RP+ T + +N
Sbjct: 240 HGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQK-SIWKGMNNGTFTI 298
Query: 338 TGSDNCTFNKNQKELGKD-------------SFTHIPNGVNGVQDRLSVIWEKGVVPG-I 383
GSD+C++N +K F +IPNG+ GV R+ ++++ G + G +
Sbjct: 299 VGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNL 358
Query: 384 LSPEKFVAVTSTNAAKIFNLYPKKG 408
S K V + TN AK++ +YP+KG
Sbjct: 359 TSMMKLVEIQCTNPAKVYGMYPQKG 383
>d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens
[TaxId: 43663]}
Length = 325
Score = 201 bits (510), Expect = 3e-60
Identities = 81/337 (24%), Positives = 139/337 (41%), Gaps = 12/337 (3%)
Query: 72 GGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKA 131
G +D H H +++ F +++A GG TTII+ + + + + +++A
Sbjct: 1 GVVDEHVHI-IDMDLKNRYGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQA 59
Query: 132 DEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSA 191
+++ D+AL+ G + ++M G S +SDGEL++ F
Sbjct: 60 GQRLKVDFALYGGGVPGNLPEIRKM-HDAGAVGFKSMMAASVPGMFDAVSDGELFEIFQE 118
Query: 192 IKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVD 251
I G++ +VHAEN II +++ AAG K ++ S+P E EA+ RA + +
Sbjct: 119 IAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAG 178
Query: 252 CPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHV 311
C L V+H+ + + + +G+ + N ++
Sbjct: 179 CRLIVLHVSNPDGVELIHQA----QSEGQDVHCESGPQ------YLNITTDDAERIGPYM 228
Query: 312 LSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRL 371
P L L + T GSD+ KE G NG G++ L
Sbjct: 229 KVAPPVRSAEMNIRLWEQLENGLIDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSL 288
Query: 372 SVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKG 408
++ GV G LS E+ V V AK+F +YP+KG
Sbjct: 289 PMMLTNGVNKGRLSLERLVEVMCEKPAKLFGIYPQKG 325
>d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex
aeolicus [TaxId: 63363]}
Length = 310
Score = 155 bits (391), Expect = 3e-43
Identities = 63/332 (18%), Positives = 110/332 (33%), Gaps = 25/332 (7%)
Query: 72 GGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKA 131
G ID H H G T +D G++ AVAGG TTI+ QK+
Sbjct: 1 GFIDIHVHLRD--PGQTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKS 58
Query: 132 DEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSA 191
C IT + ++ G +F G ++ + A
Sbjct: 59 KSVGLCRVLPTGTITKGRKGKEIADFYSLKEAGCVAFT----DDGSPVMDSSVMRKALEL 114
Query: 192 IKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVD 251
LG M H E+ ++ + G SR E E + R +A +
Sbjct: 115 ASQLGVPIMDHCEDDKLAYGVINE----GEVSALLGLSSRAPEAEEIQIARDGILAQRTG 170
Query: 252 CPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHV 311
+++ H+ +K + + + + +KG T H + A+
Sbjct: 171 GHVHIQHVSTKLSLEIIEF----FKEKGVKITCEVNPN------HLLFTEREVLNSGANA 220
Query: 312 LSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRL 371
P + L+ + + +D+ +KEL G+ G+Q L
Sbjct: 221 RVNPPLRKKEDRLALIEGVKRGIIDCFATDHAPHQTFEKEL----VEFAMPGIIGLQTAL 276
Query: 372 SVIWEKGVVPGILSPEKFVAVTSTNAAKIFNL 403
E GI+S +K + + + N A+I +
Sbjct: 277 PSALE-LYRKGIISLKKLIEMFTINPARIIGV 307
>d2vhla2 c.1.9.10 (A:58-358) N-acetylglucosamine-6-phosphate
deacetylase, NagA, catalytic domain {Bacillus subtilis
[TaxId: 1423]}
Length = 301
Score = 109 bits (271), Expect = 5e-27
Identities = 43/339 (12%), Positives = 86/339 (25%), Gaps = 40/339 (11%)
Query: 72 GGIDPHTH--FELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQ 129
G ID H H + + M A+ + GTT+ + + ++ ++ + + R+
Sbjct: 1 GMIDIHIHGGYGADTMDAS-FSTLDIMSSRLPEEGTTSFLATTITQEHGNISQALVNARE 59
Query: 130 KADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAF 189
+ + E + K K SD EL+ +
Sbjct: 60 WKAAEESSLLGAELLGIHL------EGPFVSPKRA------GAQPKEWIRPSDVELFKKW 107
Query: 190 SAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQ 249
+ A + + + L I GH + + A A + +
Sbjct: 108 QQEAGGLIKIVTLAPEEDQHFELIRHLKDESIIASMGHTDADSALLSDAAKAGASHMTHL 167
Query: 250 VDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAA 309
+ H G A+A+ + P
Sbjct: 168 YNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSH---------------PLAAKLAFL 212
Query: 310 HVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQD 369
S L + + F + + + G
Sbjct: 213 AKGSSKLILIT----------DSMRAKGLKDGVYEFGGQSVTVRGRTALLSDGTLAGSIL 262
Query: 370 RLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKG 408
+++ S +TS NAAK ++ +KG
Sbjct: 263 KMNEGARHMREFTNCSWTDIANITSENAAKQLGIFDRKG 301
>d1i0da_ c.1.9.3 (A:) Phosphotriesterase (parathion hydrolase, PTE)
{Pseudomonas diminuta [TaxId: 293]}
Length = 331
Score = 93.6 bits (231), Expect = 2e-21
Identities = 42/349 (12%), Positives = 79/349 (22%), Gaps = 47/349 (13%)
Query: 72 GGIDPHTHFELELMGATSVDDFYHGT------------KAAVAGGTTTIIDFALPRKGES 119
G H H G + G+ + A A G TI+D + G
Sbjct: 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRD 75
Query: 120 LIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYM 179
+ E R AD + L E + + +
Sbjct: 76 VSLLAEVSRA-ADVHIVAATGLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGII 134
Query: 180 LSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEA 239
L A A G + + + + E
Sbjct: 135 KVATTGKATPFQELVLKAAARASLATGVPV-----------------TTHTAASQRDGEQ 177
Query: 240 VTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQ 299
+ + H + L +G L
Sbjct: 178 QAAIFESEGLSPSRVCIGHSDDTDDLSYL----TALAARGYLIGLDH----------IPH 223
Query: 300 IPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENAL-QTTGSDNCTFNKNQKELGKDSFT 358
D A+ +R +T + L+++ + Q S++ F +
Sbjct: 224 SAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDV- 282
Query: 359 HIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKK 407
+G+ + G+ E +T TN A+ + +
Sbjct: 283 MDRVNPDGMAFIPLRVIPFLREKGV-PQETLAGITVTNPARFLSPTLRA 330
>d1kcxa1 b.92.1.3 (A:15-66,A:401-490) Dihydropyrimidinase related
protein-1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 142
Score = 86.9 bits (215), Expect = 6e-21
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 360 IPNG--VNGVQDRLSVIW-EKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDA 416
I G +N Q + ++ E G++ I + K + +IA GSDA
Sbjct: 5 IRGGRIINDDQSFYADVYLEDGLIKQI-----GENLIVPGGVKTIEANGRMVIIAVGSDA 59
Query: 417 DIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGN 476
D+V+W+ +TI+AK+H +YNIFEG+ CHG P VI G++ ++GN+ V++G G
Sbjct: 60 DVVIWDPDKMKTITAKSHKSTVEYNIFEGMECHGSPLVVISQGKIVFEDGNISVSKGMGR 119
Query: 477 YLPTHTNPPFVYEG 490
++P P +Y+
Sbjct: 120 FIPRKPFPEHLYQR 133
Score = 65.7 bits (160), Expect = 2e-13
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPG-GIDPH 77
+RLLI+ G+++N D+ D+Y+E+G+I+Q+G NLIVPGGV+ I+A G VI G D
Sbjct: 1 DRLLIRGGRIINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIIAVGSDAD 60
Query: 78 THF 80
Sbjct: 61 VVI 63
>d2ftwa1 b.92.1.3 (A:7-59,A:394-490) Dihydropyrimidine
amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId:
44689]}
Length = 150
Score = 84.7 bits (209), Expect = 6e-20
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 360 IPNG--VN-GVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDA 416
I NG VN + V+ E G++ I + K+ + K +I G D
Sbjct: 6 IKNGTVVNDDRYFKSDVLVENGIIKEI-----SKNIEPKEGIKVVDATDKLLLIDVGCDG 60
Query: 417 DIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGN 476
DIV+W+ +TIS TH HA D+NIFEG+ G+ IV G + + L +G G
Sbjct: 61 DIVIWDPNQSKTISKDTHHHAVDFNIFEGIKVTGIAVTTIVAGNIVWSDNKLSCVKGSGR 120
Query: 477 YLPTHTNPPFVYEG 490
++P P V++G
Sbjct: 121 FVPRPPFGP-VFDG 133
Score = 66.2 bits (161), Expect = 1e-13
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYV-IPGGIDPH 77
+LIKNG VVN D+ D+ +ENG+I+++ +N+ G++V+DA + I G D
Sbjct: 2 GTILIKNGTVVNDDRYFKSDVLVENGIIKEISKNIEPKEGIKVVDATDKLLLIDVGCDGD 61
Query: 78 THF 80
Sbjct: 62 IVI 64
>d1onwa1 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidase
{Escherichia coli [TaxId: 562]}
Length = 105
Score = 68.5 bits (167), Expect = 8e-15
Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 17/105 (16%)
Query: 16 SSQNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIV--PGGVRVIDAAGSYVIPGG 73
++ L++ + + D+ + NG I + N+ V+D +G + P
Sbjct: 5 TAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPEI 64
Query: 74 IDPHTHF-----------ELELMGATSVDDFYHGTKAAVAGGTTT 107
+ + ++ G V D KA V G T
Sbjct: 65 LPGNDADLLVMTPELRIEQVYARGKLMVKD----GKACVKGTFET 105
>d2fvka1 b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine
amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri)
[TaxId: 4934]}
Length = 156
Score = 65.4 bits (159), Expect = 3e-13
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYV---IPGGIDPH 77
L+IKNG + A I +I + NG +Q + ++ G VIDA G+++ +PG D
Sbjct: 5 LIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPILPGVSDAD 64
Query: 78 THF 80
Sbjct: 65 LVI 67
Score = 53.5 bits (128), Expect = 4e-09
Identities = 19/56 (33%), Positives = 25/56 (44%)
Query: 424 KAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLP 479
+ I+ K H CDY FEG+ P Y IV G++ EG + G YL
Sbjct: 79 SKPKLITNKLMEHNCDYTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLK 134
>d2eg6a1 c.1.9.4 (A:4-346) Dihydroorotase {Escherichia coli [TaxId:
562]}
Length = 343
Score = 67.3 bits (163), Expect = 1e-12
Identities = 34/336 (10%), Positives = 63/336 (18%), Gaps = 37/336 (11%)
Query: 75 DPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEK 134
D H H M + I + ++ ++RQ+ +
Sbjct: 11 DWHLHLRDGDM--------LKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDA 62
Query: 135 VCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKN 194
V + +T + + EL F Y + + AI
Sbjct: 63 VPAGHDFTPLMTCYLTD-SLDPNELERGFNEGVFTAAKLYPANATTNSSHGVTSVDAIMP 121
Query: 195 LGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPL 254
+ + ++ E
Sbjct: 122 --VLERMEKIGMPLLVHGEV---------THADIDIFDREARFIESVMEPLRQR---LTA 167
Query: 255 YVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSP 314
V DA Y R + + + N + + L
Sbjct: 168 LKVVFEHITTKDAADYVRD----GNERLA--ATITPQHLMFNRNHMLVGGVRPHLYCLPI 221
Query: 315 PLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVI 374
R E + + + G L
Sbjct: 222 LKRNIHQQALR------ELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSY 275
Query: 375 WEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVI 410
L + F A S N + + L I
Sbjct: 276 ATVFEEMNAL--QHFEAFCSVNGPQFYGLPVNDTFI 309
>d1gkpa1 b.92.1.3 (A:2-54,A:390-459) D-hydantoinase {Thermus sp.
[TaxId: 275]}
Length = 123
Score = 61.5 bits (149), Expect = 4e-12
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 414 SDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQG 473
AD+VV++ + + TIS KT DYN FEG G P V V G+V V +G +G
Sbjct: 52 PGADLVVYDPQYRGTISVKTQHVNNDYNGFEGFEIDGRPSVVTVRGKVAVRDGQFVGEKG 111
Query: 474 QGNYLPTHTNPPFVY 488
G L P +
Sbjct: 112 WGKLLRR---EPMYF 123
Score = 61.1 bits (148), Expect = 4e-12
Identities = 27/61 (44%), Positives = 34/61 (55%)
Query: 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHF 80
LLIKNG+++ AD DIY E I ++G+NL P G VIDA G YV PG
Sbjct: 2 LLIKNGEIITADSRYKADIYAEGETITRIGQNLEAPPGTEVIDATGKYVFPGADLVVYDP 61
Query: 81 E 81
+
Sbjct: 62 Q 62
>d1k1da1 b.92.1.3 (A:1-52,A:385-460) D-hydantoinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 128
Score = 60.5 bits (146), Expect = 8e-12
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 387 EKFVAVTSTNAAKIFNLYPKKG----VIAEGSDADIVVWNYKAKRTISAKTHAHACDYNI 442
K + K + KG I GSDAD+V+++ +R ISA+TH A DYN
Sbjct: 26 GKIAMIGQNLEEKGAEVIDAKGCYVFPIVVGSDADLVIFDPNIERVISAETHHMAVDYNA 85
Query: 443 FEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLP 479
FEG+ G P V+ G V + G G YL
Sbjct: 86 FEGMKVTGEPVSVLCRGEFVVRDKQFVGKPGYGQYLK 122
Score = 48.2 bits (114), Expect = 2e-07
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Query: 20 RLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTH 79
+IKNG +V A + + I++G I +G+N + G VIDA G YV P +
Sbjct: 2 TKIIKNGTIVTATDTYEAHLLIKDGKIAMIGQN-LEEKGAEVIDAKGCYVFPIVVGSDAD 60
Query: 80 FELELMGAT---SVDDFYHGTKAAVAGGTT 106
+ S + + G
Sbjct: 61 LVIFDPNIERVISAETHHMAVDYNAFEGMK 90
>d1gkra1 b.92.1.3 (A:1-54,A:380-451) L-hydantoinase {Arthrobacter
aurescens [TaxId: 43663]}
Length = 126
Score = 60.0 bits (145), Expect = 1e-11
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 404 YPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCV 463
+ GSDAD+++ + + A Y+ F+G+ G P +V G V
Sbjct: 50 KFVMPTLQVGSDADLLILDLDIDTKVDASQFRSLHKYSPFDGMPVTGAPVLTMVRGTVVA 109
Query: 464 DEGNLRVAQGQGNYLP 479
++G + V QG G ++
Sbjct: 110 EKGEVLVEQGFGQFVT 125
Score = 54.3 bits (130), Expect = 1e-09
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPG---GIDPH 77
+++KN ++V++D I++ DI +++G + + + R IDA G +V+P G D
Sbjct: 4 VIVKNCRLVSSDGITEADILVKDGKVAAISADTSDVEASRTIDAGGKFVMPTLQVGSDAD 63
Query: 78 THF-ELELMGATSVDDFYHGTKAAVAGGTT 106
+L++ F K + G
Sbjct: 64 LLILDLDIDTKVDASQFRSLHKYSPFDGMP 93
>d1ynya1 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacillus sp.
AR9 [TaxId: 301298]}
Length = 127
Score = 59.6 bits (144), Expect = 2e-11
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 387 EKFVAV---TSTNAAKIFNLYPKKGV-IAEGSDADIVVWNYKAKRTISAKTHAHACDYNI 442
E+ VA+ S N A+ + + IA GSDADIV+++ KRT+S +TH DYN
Sbjct: 25 ERVVAIGHQLSVNGAEEIDATGCYVIPIAVGSDADIVIFDPHVKRTLSVETHHMNVDYNP 84
Query: 443 FEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTNPPF 486
FEG+ +G V+ G V + G G Y+ F
Sbjct: 85 FEGMEVYGEVVSVLSRGSFVVRDKQFVGQAGSGQYIKR---TTF 125
Score = 51.5 bits (123), Expect = 1e-08
Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Query: 20 RLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTH 79
+ I+ G VV A D+ IE + +G L V G IDA G YVIP +
Sbjct: 1 KKWIRGGTVVTAADTYQADVLIEGERVVAIGHQLSVNGA-EEIDATGCYVIPIAVGSDAD 59
Query: 80 FELELMGATSVDDFYH 95
+
Sbjct: 60 IVIFDPHVKRTLSVET 75
>d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein
EAJ56179 {Unidentified organism [TaxId: 32644]}
Length = 102
Score = 57.7 bits (139), Expect = 4e-11
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 21 LLIKNGKVVNADK---ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPH 77
L +NG +++ D + +I IE+G I+++ I VID G ++P +
Sbjct: 3 FLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPRIVPGA 62
Query: 78 THFELELMG 86
L + G
Sbjct: 63 HADVLVVDG 71
>d1onwa2 c.1.9.13 (A:63-346) Isoaspartyl dipeptidase, catalytic
domain {Escherichia coli [TaxId: 562]}
Length = 284
Score = 61.7 bits (148), Expect = 4e-11
Identities = 38/338 (11%), Positives = 78/338 (23%), Gaps = 55/338 (16%)
Query: 72 GGIDPHTHFELE-LMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQK 130
G ID H H + G T+++ ++ + +
Sbjct: 1 GFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRA 60
Query: 131 ADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFS 190
+E+ + L S + + + + D
Sbjct: 61 LNEEGISAWMLTGAYHVPSRTITGSVEKDV-----------------------AIIDRVI 97
Query: 191 AIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQV 250
+K + A + + + G+ G + +A+ +
Sbjct: 98 GVKCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPIYDLLENC 157
Query: 251 DCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAH 310
D P+ + H A+
Sbjct: 158 DVPISKLL--------------------PTHVNRNVPLFEQALEFARKGGTIDI----TS 193
Query: 311 VLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDR 370
+ P+ P E + + + T SD + G GV G +
Sbjct: 194 SIDEPVAPAEGIARAVQAGIPLARV-TLSSDGNGSQPFFDDEGNL----THIGVAGFETL 248
Query: 371 LSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKG 408
L + V S + +++ A NL KG
Sbjct: 249 LETVQVL-VKDYDFSISDALRPLTSSVAGFLNL-TGKG 284
>d1ejxc1 b.92.1.1 (C:1002-1129,C:1423-1475) alpha-Subunit of urease
{Klebsiella aerogenes [TaxId: 28451]}
Length = 181
Score = 58.7 bits (142), Expect = 9e-11
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 13/98 (13%)
Query: 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGR----------NLIVPGGVRVIDAAGSYVI 70
L++ N +V+ I DI +++G I +G+ + + VI A G V
Sbjct: 67 LVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVT 126
Query: 71 PGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTI 108
G I+ +L + S F + GG I
Sbjct: 127 AGSIEVGKLADLVV---WSPAFFGVKPATVIKGGMIAI 161
>d1nfga1 b.92.1.3 (A:1-51,A:382-457) D-hydantoinase {Burkholderia
pickettii [TaxId: 329]}
Length = 127
Score = 56.5 bits (136), Expect = 2e-10
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 417 DIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGN 476
DIV+W+ +A+ I +A DY+ +EG GVP+ V++ G+V VDEG+ G
Sbjct: 59 DIVLWDPEAEMVIEQTAMHNAMDYSSYEGHKVKGVPKTVLLRGKVIVDEGSYVGEPTDGK 118
Query: 477 YLPTHTNPPF 486
+L +
Sbjct: 119 FLK---RRKY 125
Score = 44.6 bits (105), Expect = 3e-06
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHF 80
++IKNG +V AD IS D+ I++G I Q+G L R IDAAG YV P +
Sbjct: 3 IIIKNGTIVTADGISRADLGIKDGKITQIGGAL--GPAERTIDAAGRYVFPIAVGSDADI 60
>d1xrta1 b.92.1.3 (A:1-55,A:366-422) Two-domain dihydroorotase
{Aquifex aeolicus [TaxId: 63363]}
Length = 112
Score = 53.9 bits (129), Expect = 1e-09
Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 8/105 (7%)
Query: 359 HIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLY--PKKGVIAEGSDA 416
++ + ++ ++ E G + I A+I + + GS A
Sbjct: 10 YVIDPSQNLEGEFDILVENGKIKKIDK------NILVPEAEIIDAKGLIVCPTLKLGSPA 63
Query: 417 DIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRV 461
DI +++ + ++ +T+ G V G Y I G++
Sbjct: 64 DITIFDPNKEWILNEETNLSKSRNTPLWGKVLKGKVIYTIKDGKM 108
Score = 36.9 bits (85), Expect = 0.001
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 20 RLLIKNGKVVNADKISD--LDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGI 74
+L++KNG V++ + + DI +ENG I+++ +N++VP +IDA G V P
Sbjct: 3 KLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNILVPEA-EIIDAKGLIVCPTLK 58
>d1m7ja1 b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolase
{Alcaligenes faecalis [TaxId: 511]}
Length = 55
Score = 49.0 bits (117), Expect = 1e-08
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 21 LLIKNGKVVN--ADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIP 71
++ G V++ D+ + I +G +L R ID AG V P
Sbjct: 4 YILSGGTVIDGTNAPGRLADVGVRGDRIAAVG-DLSASSARRRIDVAGKVVSP 55
>d2vhla1 b.92.1.5 (A:3-57,A:359-394)
N-acetylglucosamine-6-phosphate deacetylase, NagA
{Bacillus subtilis [TaxId: 1423]}
Length = 91
Score = 46.9 bits (111), Expect = 2e-07
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 21 LLIKNGKVVNADK-ISDLDIYIENGVIQQLGRNLI-VPGGVRVIDAAGSYVIPGGIDPHT 78
LLIK+ +V ++ I + + I +G I + P + A S ++P
Sbjct: 3 LLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKEPYSKEIQAPADSVLLPSVTVGKD 62
Query: 79 HFELELMGATS 89
+L+ +S
Sbjct: 63 A---DLVIVSS 70
>d2qs8a1 b.92.1.9 (A:7-63,A:374-412) Xaa-Pro dipeptidase
{Alteromonas macleodii [TaxId: 28108]}
Length = 96
Score = 43.8 bits (103), Expect = 3e-06
Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Query: 20 RLLIKNGKVV---NADKISDLDIYIENGVIQQLGRNLIVPG-GVRVIDAAGSYVIPGGID 75
+ LI GK++ + S + I I+ +I + + I ID V+P
Sbjct: 2 KTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGFISSNDFEDYIDLRDHTVLPSIES 61
Query: 76 PHTH 79
Sbjct: 62 GKLA 65
>d1yrra1 b.92.1.5 (A:1-53,A:351-382)
N-acetylglucosamine-6-phosphate deacetylase, NagA
{Escherichia coli [TaxId: 562]}
Length = 85
Score = 42.8 bits (100), Expect = 6e-06
Identities = 8/59 (13%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 22 LIKNGKVVNADKISDL-DIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTH 79
+ G++ + D + I +G+I+ + +P + G+ + P
Sbjct: 3 ALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPTLAAGKVA 61
>d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453
{Bifidobacterium longum [TaxId: 216816]}
Length = 118
Score = 38.3 bits (88), Expect = 4e-04
Identities = 15/95 (15%), Positives = 28/95 (29%), Gaps = 7/95 (7%)
Query: 18 QNRLLIKNGKVVNADK----ISDLDIYIEN-GVIQQLGR--NLIVPGGVRVIDAAGSYVI 70
+ + +V DK + ++ I + G I+Q+ +P +D G V+
Sbjct: 3 VEPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVM 62
Query: 71 PGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGT 105
L + H AG
Sbjct: 63 LEVGKSADLLVLNANPLDDLRALEHPALVIAAGHP 97
>d1p1ma1 b.92.1.4 (A:1-49,A:331-404) Hypothetical protein TM0936
{Thermotoga maritima [TaxId: 2336]}
Length = 123
Score = 37.6 bits (87), Expect = 8e-04
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 6/62 (9%)
Query: 407 KGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEG 466
I EG +AD+VV + + + + G +V G+ +G
Sbjct: 48 MPKIEEGWNADLVVIDLDLPEMFPVQNIKNHLVHA------FSGEVFATMVAGKWIYFDG 101
Query: 467 NL 468
Sbjct: 102 EY 103
>d2bb0a1 b.92.1.10 (A:3-73,A:374-415) Imidazolonepropionase
{Bacillus subtilis [TaxId: 1423]}
Length = 113
Score = 37.0 bits (85), Expect = 0.001
Identities = 15/99 (15%), Positives = 28/99 (28%), Gaps = 14/99 (14%)
Query: 367 VQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAK 426
+ I+ + A A +I + + + G AD+V+W
Sbjct: 29 DLHVIEDAVVGIHEQKIVFAGQKGAEAGYEADEIIDCSGRLVTLKAGRSADLVIWQAPNY 88
Query: 427 RTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE 465
I Y+ V V+ G + V+
Sbjct: 89 MYIP---------YHYGVNHV-----HQVMKNGTIVVNR 113
>d2icsa1 b.92.1.8 (A:4-54,A:322-371) Putative adenine deaminase
EF0837 {Enterococcus faecalis [TaxId: 1351]}
Length = 101
Score = 34.7 bits (80), Expect = 0.004
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 20/85 (23%)
Query: 387 EKFVAVTST---NAAKIFNLYPK---KGVIAEGSDADIVVWNYKAKRTISAKTHAHACDY 440
+K AV +T +A + +L P + G DAD+ ++ +A+
Sbjct: 24 KKIAAVAATISGSAKETIHLEPGTYVSATLEIGKDADLTIFTIQAEE----------KTL 73
Query: 441 NIFEGLVCHG----VPEYVIVGGRV 461
GL P I+GG++
Sbjct: 74 TDSNGLTRVAKEQIRPIKTIIGGQI 98
Score = 31.6 bits (72), Expect = 0.062
Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDP 76
LLIKNG+ VN + +I I+ I + + I + ++
Sbjct: 4 LLIKNGQTVNGMPV---EIAIKEKKIAAVAATISGS-AKETIHLEPGTYVSATLEI 55
>d2q09a1 b.92.1.10 (A:4-65,A:367-407) Probable
4-imidazolone-5-propanoate amidohydrolase GOS_1928421
{Environmental samples}
Length = 103
Score = 33.2 bits (76), Expect = 0.017
Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 13/73 (17%)
Query: 353 GKDSFTHIPNGVNGVQD-RLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIA 411
+ + GV + R+ + + G A ++ K +
Sbjct: 17 DLADYGLLEPHALGVHEGRIHALVPMQDLKG------------PYPAHWQDMKGKLVTLR 64
Query: 412 EGSDADIVVWNYK 424
G AD +VWN
Sbjct: 65 VGMLADFLVWNCG 77
>d2qs8a2 c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromonas
macleodii [TaxId: 28108]}
Length = 310
Score = 34.6 bits (77), Expect = 0.024
Identities = 25/257 (9%), Positives = 57/257 (22%), Gaps = 18/257 (7%)
Query: 72 GGIDPHTH----------FELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLI 121
G +D H H +++ G TT+ +
Sbjct: 1 GLMDMHVHFGQEYQSKAQAPIKVEREMQAILATQHAYVTFKSGFTTVRQVGDSGLVAISL 60
Query: 122 KTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLS 181
+ + + A ++ +D + + + Y+ +
Sbjct: 61 RDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVR 120
Query: 182 DGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVT 241
A + + A++G+ +++ A + AE +
Sbjct: 121 QRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHAHGAEGMK 180
Query: 242 RACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIP 301
RA + + + T+ A N P
Sbjct: 181 RAIKAGVDSIEHGTFMDLEAMDLMIENGTYY--------VPTISAGEFVAEKSKIDNFFP 232
Query: 302 CTWHDQAAHVLSPPLRP 318
+AA V
Sbjct: 233 EIVRPKAASVGPQISDT 249
>d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain
{Escherichia coli [TaxId: 562]}
Length = 320
Score = 34.5 bits (77), Expect = 0.029
Identities = 45/357 (12%), Positives = 85/357 (23%), Gaps = 52/357 (14%)
Query: 74 IDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADE 133
++PH H + G GT E + + E +
Sbjct: 3 VEPHIHLDTT---------QTAGQPNWNQSGTL----------FEGIERWAERKALLTHD 43
Query: 134 KV------CCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYD 187
V + + GI V A L + K +A +
Sbjct: 44 DVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEG 103
Query: 188 AFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIA 247
S + A + G H E E++ + +A
Sbjct: 104 ILSYPNGEALLEEALRL-------------GADVVGAIPHFEFTREYGV-ESLHKTFALA 149
Query: 248 NQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQ 307
+ D + V L H G + A+ T + + +
Sbjct: 150 QKYDRLIDVHCDEIDDEQSRFVETVAALA----HHEGMGARVTASHTTAMHSYNGAYTSR 205
Query: 308 AAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSF-------THI 360
+L P + L + + F
Sbjct: 206 LFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDGVFDPWY 265
Query: 361 PNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDAD 417
P G + L + + G + + + ++A+ NL + IA G+ A+
Sbjct: 266 PLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNL--QDYGIAAGNSAN 320
>d1o12a2 c.1.9.10 (A:44-331) N-acetylglucosamine-6-phosphate
deacetylase, NagA, catalytic domain {Thermotoga maritima
[TaxId: 2336]}
Length = 288
Score = 34.1 bits (76), Expect = 0.035
Identities = 45/333 (13%), Positives = 84/333 (25%), Gaps = 50/333 (15%)
Query: 72 GGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKA 131
G +DPH H + T DF + + G TT + + E + + R
Sbjct: 1 GFVDPHIHGVVG--ADTMNCDFSEMEEFLYSQGVTTFLATTVSTSLEKMKEILRKARDYI 58
Query: 132 DEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSA 191
E +G+ + K + K + S+ EL + S
Sbjct: 59 LE---NPSTSLLGVHLE------------GPYISKEKKGAHSEKHIRPPSERELSEIDSP 103
Query: 192 IKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVD 251
K L + + + +L+AG + + + + +T +
Sbjct: 104 AKMLTFAPEIESSELLLRLVKRDIVLSAGHSIATFEEFMKFYKEGVKRITHFPNGLKPLH 163
Query: 252 CPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHV 311
+ D + G H ++ +
Sbjct: 164 HREIGITGAGLLLDDVKLELICD-------------------GVHLSREMVKLVYKVKKA 204
Query: 312 LSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVN-GVQDR 370
L D + L D T + KD + +G G
Sbjct: 205 NGIVLVTDSISAAGL-------------KDGTTTLGDLVVKVKDGVPRLEDGTLAGSTLF 251
Query: 371 LSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNL 403
S + S + V+S N+ L
Sbjct: 252 FSQAVKNFRKFTGCSITELAKVSSYNSCVELGL 284
>d1m7ja2 b.92.1.6 (A:420-480) N-acyl-D-aminoacid amidohydrolase
{Alcaligenes faecalis [TaxId: 511]}
Length = 61
Score = 30.5 bits (69), Expect = 0.057
Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 10/59 (16%)
Query: 410 IAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNL 468
+ G AD+VV++ T A + + V V G ++ +
Sbjct: 2 VQPGYYADLVVFD--------PATVADSATFE--HPTERAAGIHSVYVNGAAVWEDQSF 50
>d2ooda2 c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobium
japonicum [TaxId: 375]}
Length = 325
Score = 32.6 bits (72), Expect = 0.12
Identities = 28/256 (10%), Positives = 56/256 (21%), Gaps = 28/256 (10%)
Query: 71 PGGIDPHTHFELELMGA---------------------TSVDDFYHGTKAAV----AGGT 105
PG ID H H + + G K + A GT
Sbjct: 1 PGFIDGHIHLPQTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGT 60
Query: 106 TTIIDFA---LPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEK 162
TT F E + + D + ++ L +
Sbjct: 61 TTCQAFTSSSPVATEELFEEASRRNMRVIAGLTGIDRNAPAEFIDTPENFYRDSKRLIAQ 120
Query: 163 HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIK 222
+ + + EL A +K+ V+ E + + L+
Sbjct: 121 YHDKGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTHISENPAECSGVLVEHPDC 180
Query: 223 GPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHC 282
+ + V + + + + + +
Sbjct: 181 QDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAAVVFCPCSNLFLGSGLFRLGRA 240
Query: 283 TLYGETLAAAVGTHAN 298
T + + GT
Sbjct: 241 TDPEHRVKMSFGTDVG 256
>d3be7a1 b.92.1.9 (A:3-56,A:360-400) Zn-dependent arginine
carboxypeptidase {Unidentified organism [TaxId: 32644]}
Length = 95
Score = 30.5 bits (69), Expect = 0.13
Identities = 16/75 (21%), Positives = 23/75 (30%), Gaps = 19/75 (25%)
Query: 394 STNAAKIFNLYPKK--GVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGV 451
+T A + ++ I EG DADIV I
Sbjct: 38 NTKDATVISIPDLILIPQIKEGFDADIVGVIENPLANIRTLEE----------------- 80
Query: 452 PEYVIVGGRVCVDEG 466
+V+ G+V EG
Sbjct: 81 VAFVMKEGKVYKREG 95
>d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate
deacetylase, NagA, catalytic domain {Escherichia coli
[TaxId: 562]}
Length = 297
Score = 32.1 bits (71), Expect = 0.18
Identities = 42/342 (12%), Positives = 85/342 (24%), Gaps = 50/342 (14%)
Query: 72 GGIDPHTHFEL-----ELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYES 126
G ID + + A SV+ KA G T + + E + +
Sbjct: 1 GFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRV 60
Query: 127 WRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELY 186
R+ + LH+ W + H N + A ++
Sbjct: 61 MREYLAKHPNQALGLHLEGPWLNL-------VKKGTHNPNFVRKPDAALVDFL------- 106
Query: 187 DAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTI 246
+N I V + + KL AGI GH + +E +A
Sbjct: 107 -----CENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFA 161
Query: 247 ANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHD 306
+ + Y+ AG + + + A +++
Sbjct: 162 THLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDA 221
Query: 307 QAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNG 366
A E T+ N L +
Sbjct: 222 TAPAGA-----NIEQFIFAGKTIYYRNGLCVDENG--------------------TLSGS 256
Query: 367 VQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKG 408
+ + V ++ ++ + + + A+ + + G
Sbjct: 257 SLTMIEGVR-NLVEHCGIALDEVLRMATLYPARAIGVEKRLG 297
>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 114
Score = 30.6 bits (68), Expect = 0.19
Identities = 12/108 (11%), Positives = 28/108 (25%), Gaps = 16/108 (14%)
Query: 83 ELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALH 142
+++ +V+ + + A T ++DF G +
Sbjct: 7 QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVD 66
Query: 143 VGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFS 190
+ + + TFM K +G++ D
Sbjct: 67 TDELKS----------VASDWAIQAMPTFMFLK------EGKILDKVV 98
>d2paja1 b.92.1.4 (A:10-69,A:406-484) Hypothetical protein
GOS_1943094 {Environmental samples}
Length = 139
Score = 30.4 bits (68), Expect = 0.28
Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 11/88 (12%)
Query: 384 LSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIF 443
+ + A+ I + +A G ADI V+ R ++
Sbjct: 35 DTIDAIGALAPRPGETIVDATDCVIYVAVGYAADIAVYRLDDPRYFGL--------HDPA 86
Query: 444 EGLVCHGVPE---YVIVGGRVCVDEGNL 468
G V G + G+ V + +
Sbjct: 87 IGPVASGGRPSVMALFSAGKRVVVDDLI 114
>d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein
{Escherichia coli [TaxId: 562]}
Length = 291
Score = 30.3 bits (67), Expect = 0.54
Identities = 37/250 (14%), Positives = 65/250 (26%), Gaps = 24/250 (9%)
Query: 154 QEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNT 213
Q M ++ + G+N Y+ + + + EI
Sbjct: 63 QFMLDVMRETGINVVACTGYYQDAFFPEH---------VATRSVQELAQEMVDEIEQGID 113
Query: 214 QKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRK 273
L AGI G + +E + A NQ P+ H G +
Sbjct: 114 GTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPI-STHTSFSTMGLEQLALLQ 172
Query: 274 ELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNEN 333
T+ L + I + Q + PDE L L +
Sbjct: 173 AHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRG 232
Query: 334 ALQ--TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVA 391
L D T + K G + ++ + + + G S
Sbjct: 233 LLNRVMLSMD-ITRRSHLKANGGYGYDYLLTTF------IPQLRQSGF-----SQADVDV 280
Query: 392 VTSTNAAKIF 401
+ N ++ F
Sbjct: 281 MLRENPSQFF 290
>d2icsa2 c.1.9.14 (A:55-321) Putative adenine deaminase EF0837
{Enterococcus faecalis [TaxId: 1351]}
Length = 267
Score = 30.3 bits (66), Expect = 0.58
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
Query: 72 GGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIID 110
G ID H H + A D + V G TT+ID
Sbjct: 1 GWIDDHVHCFEK--MALYYDYP---DEIGVKKGVTTVID 34
Score = 27.2 bits (58), Expect = 5.1
Identities = 28/269 (10%), Positives = 59/269 (21%), Gaps = 7/269 (2%)
Query: 141 LHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAM 200
HV E+ K GV T + + E YD K +
Sbjct: 5 DHVHCFEKMALYYDYPDEIGVKKGVT---TVIDAGTTGAENIHEFYDLAQQAKTNVFGLV 61
Query: 201 VHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIM 260
++ G + L + P+ V + T+ +
Sbjct: 62 NISKWGIVAQDELADLSKVQASLVKKAIQELPDFVVGIKARMSRTVIGDNGITPLELAKQ 121
Query: 261 SKAAGDAMAYKRKELMKKG-KHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPD 319
+ + L + N DQA +
Sbjct: 122 IQQENQEIPLMVHIGSAPPHLDEILALMEKGDVLTHCFNGKENGILDQATDKIKDFAWQA 181
Query: 320 ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGV 379
++ ++ + V D + + + +
Sbjct: 182 YNKGVVFDIGHGTDSFNFHVAETALREGMKAASISTDIYIRNRENGPVYDLATTMEK--L 239
Query: 380 VPGILSPEKFVAVTSTNAAKIFNLYPKKG 408
+ + + A+ F+L +KG
Sbjct: 240 RVVGYDWPEIIEKVTKAPAENFHL-TQKG 267
>d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 103
Score = 28.8 bits (64), Expect = 0.68
Identities = 7/39 (17%), Positives = 15/39 (38%)
Query: 384 LSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWN 422
PE + + A + + + + G AD +W+
Sbjct: 38 AGPESDLPDDLSTADETTDCGGRWITLEAGKSADFAIWD 76
>d2i9ua2 c.1.9.9 (A:67-376) Guanine deaminase {Clostridium
acetobutylicum [TaxId: 1488]}
Length = 310
Score = 29.7 bits (65), Expect = 0.94
Identities = 27/166 (16%), Positives = 44/166 (26%), Gaps = 31/166 (18%)
Query: 71 PGGIDPHTHF----------ELELMG------------ATSVDDFYHGTKAAVA----GG 104
PG D H H + EL+ +VD + G
Sbjct: 1 PGMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNG 60
Query: 105 TTTIIDFALPRKGESLIK---TYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCE 161
TT + FA K ++ +S KV DY +T + E+
Sbjct: 61 TTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYNCPDYLTENYITSLNDTEEIIL 120
Query: 162 KHGVNSF--KTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205
K+ S K + + + S+ + H
Sbjct: 121 KYKDKSNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSE 166
>d2a0ua1 c.124.1.5 (A:10-383) Initiation factor 2b {Leishmania major
[TaxId: 5664]}
Length = 374
Score = 29.7 bits (66), Expect = 1.0
Identities = 13/67 (19%), Positives = 24/67 (35%)
Query: 258 HIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLR 317
I AA M ++ + + G A +GT+ + +H +V +P
Sbjct: 233 LICDGAASSLMLNRKIDAVVVGADRICQNGDTANKIGTYNLAVSAKFHGVKLYVAAPTTT 292
Query: 318 PDETTPT 324
D T +
Sbjct: 293 LDVKTAS 299
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis
semifasciata) [TaxId: 30493]}
Length = 109
Score = 28.0 bits (62), Expect = 1.1
Identities = 7/39 (17%), Positives = 15/39 (38%)
Query: 154 QEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAI 192
+ + G +K F GL +D ++ + F +
Sbjct: 12 NKAISAFKDPGTFDYKRFFHLVGLKGKTDAQVKEVFEIL 50
>d2paja2 c.1.9.9 (A:70-405) Hypothetical protein GOS_1943094
{Environmental samples}
Length = 336
Score = 29.5 bits (64), Expect = 1.1
Identities = 14/136 (10%), Positives = 26/136 (19%), Gaps = 27/136 (19%)
Query: 71 PGGIDPHTHFELELM-----------------------GATSVDDFYHGTKAAVA----G 103
P ++ H H L+ F + +
Sbjct: 1 PAWVNTHHHLFQSLLKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARS 60
Query: 104 GTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKH 163
G T+ D + ++A++ L G T L +
Sbjct: 61 GCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLLRGGATQTRQLEADLPTALRPET 120
Query: 164 GVNSFKTFMAYKGLYM 179
Y
Sbjct: 121 LDAYVADIERLAARYH 136
>d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824
{Deinococcus radiodurans [TaxId: 1299]}
Length = 308
Score = 28.9 bits (63), Expect = 1.5
Identities = 13/157 (8%), Positives = 34/157 (21%), Gaps = 34/157 (21%)
Query: 71 PGGIDPHTHFELELMGATSVD---------------DFYHGTKAA----VAGGTTTIIDF 111
P ++ HTH ++ ++ +A G + D
Sbjct: 1 PPPVNAHTHLDMSAYEFQALPYFQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDI 60
Query: 112 ALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAEL------CEKHGV 165
E + + + D+ + A +
Sbjct: 61 VW---------APEVMDALLAREDLSGTLYFEVLNPFPDKADEVFAAARTHLERWRRLER 111
Query: 166 NSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVH 202
+ ++ + +S + G +H
Sbjct: 112 PGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIH 148
>d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 27.8 bits (61), Expect = 1.6
Identities = 15/103 (14%), Positives = 28/103 (27%), Gaps = 18/103 (17%)
Query: 88 TSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITW 147
S F AA G ++DF+ K + +
Sbjct: 6 ESKTAFQEALDAA--GDKLVVVDFSATW----------CGPCKMIKPFFHSLSEKYSNVI 53
Query: 148 WSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFS 190
+ + + ++ + V TF +K G+ FS
Sbjct: 54 FLEVDVDDCQDVASECEVKCMPTFQFFK------KGQKVGEFS 90
>d1ra9a_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type
{Escherichia coli [TaxId: 562]}
Length = 159
Score = 28.1 bits (62), Expect = 1.7
Identities = 15/91 (16%), Positives = 23/91 (25%), Gaps = 6/91 (6%)
Query: 422 NYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTH 481
N C VPE +++GG + L
Sbjct: 59 NIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVY-----EQFLPKAQKL-YL 112
Query: 482 TNPPFVYEGQTPEVDIDHKENHEVIEEIREK 512
T+ EG T D + + V E +
Sbjct: 113 THIDAEVEGDTHFPDYEPDDWESVFSEFHDA 143
>d4ubpc1 b.92.1.1 (C:1-131,C:435-483) alpha-Subunit of urease
{Bacillus pasteurii [TaxId: 1474]}
Length = 180
Score = 28.1 bits (63), Expect = 1.9
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 23 IKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHF 80
+K+G +V K + DI +GV N+IV VI A G V + F
Sbjct: 89 VKDGYIVGIGKGGNPDI--MDGV----TPNMIVGTATEVIAAEGKIVTALVLWEPKFF 140
>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase)
{Proteus vulgaris [TaxId: 585]}
Length = 465
Score = 28.8 bits (63), Expect = 1.9
Identities = 16/119 (13%), Positives = 34/119 (28%), Gaps = 6/119 (5%)
Query: 48 QLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDF-YHGTKAAVAGGTT 106
+ +++ + A I T +EL G +++ +
Sbjct: 104 NILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWK 163
Query: 107 TIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGV 165
D K + I + V G S +E+ E+ ++HG+
Sbjct: 164 GDFDIK---KLKENIA--QHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGI 217
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 258
Score = 28.0 bits (62), Expect = 2.6
Identities = 9/73 (12%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 494 EVDIDHKEN-HEVIEEIREKLHGLTPNNNHKISAPRSPSYSSTSSVYGDADYGHNQIHTG 552
EV ++ + + + R ++ + H I+A R + + + + G + +
Sbjct: 129 EVQFTDQQRFKQFVSQSRARMENRLRGSGHGIAAARMDAMLNIAGWMSEQMGGLSYLEFL 188
Query: 553 KGMRPEGQRDLQS 565
+ + D +
Sbjct: 189 HTLEKKVDEDWEG 201
>d1wica_ b.1.11.2 (A:) MSP domain containing protein 2, Mospd2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 152
Score = 27.6 bits (61), Expect = 2.6
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 395 TNAAKIFNLYPKKGVIAEGSDADIVVW 421
T A + + + P G+ DI+V
Sbjct: 57 TTAPEKYRVKPSNSSCDPGASIDIIVS 83
>d3be7a2 c.1.9.18 (A:57-359) Zn-dependent arginine carboxypeptidase
{Unidentified organism [TaxId: 32644]}
Length = 303
Score = 28.1 bits (60), Expect = 3.1
Identities = 8/94 (8%), Positives = 18/94 (19%), Gaps = 9/94 (9%)
Query: 72 GGIDPHTHF---------ELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIK 122
G +D H H + + + G TT+ + + ++
Sbjct: 1 GLMDSHVHIVGNDSKGEESIADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVR 60
Query: 123 TYESWRQKADEKVCCDYALHVGITWWSDQVQQEM 156
+ D
Sbjct: 61 DAIERGVINGPTMLVSGPALGITGGHCDHNLLPP 94
>d1ldja2 a.118.17.1 (A:17-410) Cullin homolog 1, Cul-1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 394
Score = 28.2 bits (62), Expect = 3.3
Identities = 13/95 (13%), Positives = 31/95 (32%), Gaps = 20/95 (21%)
Query: 120 LIKTYESWRQKADEKV----CCDYALHVG----------ITWWSDQVQQEMAELCEKHGV 165
L T + +++ E + +Y + + Q E+A CE+ +
Sbjct: 221 LADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLI 280
Query: 166 NSFKTFMAYKGLYMLSDGE------LYDAFSAIKN 194
+ +L + +Y+ S I++
Sbjct: 281 EKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQD 315
>d1qhva_ b.21.1.1 (A:) Adenovirus fiber protein "knob" domain {Human
adenovirus type 2 [TaxId: 10515]}
Length = 195
Score = 27.5 bits (61), Expect = 3.8
Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 388 KFVAVTSTNAAKIFNLY-PKKGVIAEGSDADIVVWNYKAKRTISAKTHAHA 437
++T T A+ L + GV+ E S WN++ + +A + +A
Sbjct: 57 DLSSMTGTVASVSIFLRFDQNGVLMENSSLKKHYWNFRNGNSTNANPYTNA 107
>d1knba_ b.21.1.1 (A:) Adenovirus fiber protein "knob" domain {Human
adenovirus type 5 [TaxId: 28285]}
Length = 186
Score = 27.1 bits (60), Expect = 4.9
Identities = 8/51 (15%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 388 KFVAVTSTNAAKIFNLY-PKKGVIAEGSDADIVVWNYKAKRTISAKTHAHA 437
++ T + + + GV+ S D WN++ + +A
Sbjct: 49 SLAPISGTVQSAHLIIRFDENGVLLNNSFLDPEYWNFRNGDLTEGTAYTNA 99
>d1an8a2 d.15.6.1 (A:96-208) Streptococcal superantigen Spe-C
{Streptococcus pyogenes [TaxId: 1314]}
Length = 113
Score = 26.3 bits (58), Expect = 5.8
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 24 KNGKVVNADKISDLDIYIE 42
K+ +++N S DIY+E
Sbjct: 94 KDNRIINMKNFSHFDIYLE 112
>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 25.9 bits (56), Expect = 6.6
Identities = 8/89 (8%), Positives = 23/89 (25%), Gaps = 16/89 (17%)
Query: 102 AGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCE 161
AG ++ F + G L + + + +
Sbjct: 19 AGSRLAVVKFTMRGCGPCLRIAPA----------FSSMSNKYPQAVFLEVDVHQCQGTAA 68
Query: 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFS 190
+ +++ TF ++ + D +
Sbjct: 69 TNNISATPTFQFFR------NKVRIDQYQ 91
>d2r8ca2 c.1.9.18 (A:58-368) Uncharacterized protein EAJ56179
{Unidentified organism [TaxId: 32644]}
Length = 311
Score = 27.0 bits (57), Expect = 7.4
Identities = 16/127 (12%), Positives = 29/127 (22%), Gaps = 14/127 (11%)
Query: 72 GGIDPHTHFE-----LELMGATSVDDFYHGT----KAAVAGGTTTIIDFALPRKGESLIK 122
G ID H H L + +A + G TT+ D G +
Sbjct: 1 GLIDLHVHVVAIEFNLPRVATLPNVLVTLRAVPIMRAMLRRGFTTVRD-----AGGAGYP 55
Query: 123 TYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSD 182
++ E + + ++ + G
Sbjct: 56 FKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGV 115
Query: 183 GELYDAF 189
E+ A
Sbjct: 116 DEVRRAV 122
>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 140
Score = 26.3 bits (57), Expect = 7.6
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 16 SSQNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVP 56
+ ++ G VNA + D+ NG + + L VP
Sbjct: 100 EGSDTVITVEGGGVNA-TVIQADVAQTNGYVHIIDHVLGVP 139
>d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease,
catalytic domain {Bacillus pasteurii [TaxId: 1474]}
Length = 390
Score = 27.0 bits (60), Expect = 7.6
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 11/38 (28%)
Query: 72 GGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTII 109
GGID H HF + VD A+A G TT+
Sbjct: 1 GGIDTHVHF----INPDQVDV-------ALANGITTLF 27
>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin F [TaxId: 3562]}
Length = 112
Score = 25.9 bits (56), Expect = 7.9
Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 17/100 (17%)
Query: 91 DDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSD 150
D F+ KAA G ++D G + K ++ + +
Sbjct: 14 DTFWPIVKAA--GDKPVVLDMFTQWCG---------PCKAMAPKYEKLAEEYLDVIFLKL 62
Query: 151 QVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFS 190
QE L ++ G+ TF K + + +
Sbjct: 63 DCNQENKTLAKELGIRVVPTFKILK------ENSVVGEVT 96
>d1eu3a2 d.15.6.1 (A:97-209) Streptococcal superantigen Smez-2
{Streptococcus pyogenes [TaxId: 1314]}
Length = 113
Score = 25.5 bits (56), Expect = 8.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 24 KNGKVVNADKISDLDIYIE 42
K+ K N DKI LDI I+
Sbjct: 94 KDNKSFNIDKIGHLDIEID 112
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.133 0.399
Gapped
Lambda K H
0.267 0.0576 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,281,100
Number of extensions: 109632
Number of successful extensions: 469
Number of sequences better than 10.0: 1
Number of HSP's gapped: 427
Number of HSP's successfully gapped: 85
Length of query: 596
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 506
Effective length of database: 1,171,896
Effective search space: 592979376
Effective search space used: 592979376
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (25.7 bits)