RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10114
(819 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 122 bits (306), Expect = 3e-31
Identities = 62/308 (20%), Positives = 109/308 (35%), Gaps = 66/308 (21%)
Query: 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW----- 605
LS + VT V ++ +++ + ++VWD L GHT V +++
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 606 ---------------------------------------NGDMLSSGSRDRMILQRDVRT 626
NGD + S SRD+ I +V+T
Sbjct: 73 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 132
Query: 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKA 686
+ GHR+ V ++ + D +AS ND + VW + + EH V+
Sbjct: 133 G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVEC 190
Query: 687 IAWSPHHHGLLASGG-----------------GTADRCIRFWNTLTGQPMQCVDT-GSQV 728
I+W+P S G+ D+ I+ W+ TG + + + V
Sbjct: 191 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 250
Query: 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA 788
+ + ++S + VW Y + L H + V L +VTG+
Sbjct: 251 RGVLFHSGGKFILS--CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 308
Query: 789 GDETLRFW 796
D+T++ W
Sbjct: 309 VDQTVKVW 316
Score = 94.4 bits (233), Expect = 1e-21
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 29/213 (13%)
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580
+ +++S + +W T + + V V N+ G L+A ++ V+
Sbjct: 111 PNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 168
Query: 581 VWDVSVAKQVHKLVGHTARVGALAW----------------------NGDMLSSGSRDRM 618
VW V+ + +L H V ++W G L SGSRD+
Sbjct: 169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 228
Query: 619 ILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT 678
I DV T LVGH V G+ + +++ S +D L VW+ + ++T
Sbjct: 229 IKMWDVST--GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 286
Query: 679 EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW 711
H V ++ + + +G D+ ++ W
Sbjct: 287 AHEHFVTSLDFHKTAP-YVVTGS--VDQTVKVW 316
Score = 80.6 bits (197), Expect = 6e-17
Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 4/174 (2%)
Query: 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKA 686
P + L GHR V + + P + S D + VW+ + +T H +V+
Sbjct: 5 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64
Query: 687 IAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGY 746
I++ + + V +++ + +VS
Sbjct: 65 ISFDHSGKL--LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 122
Query: 747 SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800
++ W+ T V TGH V + + DG I + + D+T+R W V +
Sbjct: 123 KTIKM--WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 174
Score = 79.8 bits (195), Expect = 1e-16
Identities = 52/277 (18%), Positives = 93/277 (33%), Gaps = 68/277 (24%)
Query: 588 KQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGL 645
+ + L GH + V + ++ ++ S S D I D T ER L GH V +
Sbjct: 8 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET--GDFERTLKGHTDSVQDI 65
Query: 646 KW------------------------------------------SPDNQYLASGGNDNRL 663
+ P+ ++ S D +
Sbjct: 66 SFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTI 125
Query: 664 YVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD 723
+W + + ++T+T H V+ + + L+AS D+ +R W T + +
Sbjct: 126 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSN--DQTVRVWVVATKECKAELR 182
Query: 724 TGSQVCN-LAWSKHSSELVSTH------------------GYSQNQILVWKYPTLTQVAK 764
V ++W+ SS + G I +W T +
Sbjct: 183 EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 242
Query: 765 LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801
L GH V + G+ I++ A D+TLR W+ +K
Sbjct: 243 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 279
Score = 40.5 bits (93), Expect = 6e-04
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 515 YLNLVDWSSQN--VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV 572
++ V + S +LS + +W + + L+A + VTS+ +++ V
Sbjct: 249 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHKTAPYVVT 306
Query: 573 GTHHGYVQVWD 583
G+ V+VW+
Sbjct: 307 GSVDQTVKVWE 317
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 116 bits (291), Expect = 5e-29
Identities = 49/292 (16%), Positives = 90/292 (30%), Gaps = 47/292 (16%)
Query: 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDML 610
L + ++ W L+ + G + +WD +VH + ++ V A+
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 611 SSGSRDRMILQRDVRTPNSQSERRLVGHRQ------------------------------ 640
+ + R+
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWD 170
Query: 641 ---------------EVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVK 685
+V L +PD + SG D +W++ QT+T H + +
Sbjct: 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230
Query: 686 AIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHG 745
AI + P+ + R + + ++++SK L++ G
Sbjct: 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA--G 288
Query: 746 YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797
Y VW + L GH RV L ++ DG A+ TG+ D L+ WN
Sbjct: 289 YDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 74.0 bits (180), Expect = 9e-15
Identities = 44/212 (20%), Positives = 73/212 (34%), Gaps = 5/212 (2%)
Query: 588 KQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGL 645
+ L GH A++ A+ W + +L S S+D ++ D T N + V
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN--KVHAIPLRSSWVMTC 103
Query: 646 KWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705
++P Y+A GG DN ++NL + + LA + D
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163
Query: 706 RCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKL 765
W+ TGQ + + L + G +W
Sbjct: 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS-GACDASAKLWDVREGMCRQTF 222
Query: 766 TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797
TGH + + P+G A TG+ D T R ++
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLFD 254
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 97.2 bits (240), Expect = 4e-22
Identities = 62/387 (16%), Positives = 122/387 (31%), Gaps = 52/387 (13%)
Query: 459 LPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDF---- 514
+P + + + P+ L L+ + EL
Sbjct: 4 VPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTS 63
Query: 515 YLNLVDWSSQ-NVLSVGLGSCVYLWSACTSQVTR----------------LCDLSADGNS 557
+ V +S+ L+ G ++ + +
Sbjct: 64 VVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLY 123
Query: 558 VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDR 617
+ SV ++ G +A G +++WD+ K V L GH + +L + S
Sbjct: 124 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 183
Query: 618 MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM------ 671
R Q L D +Y+A+G D + VW+ +
Sbjct: 184 DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL 243
Query: 672 -SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT------ 724
S ++ T H +V ++ ++ +++ G+ DR ++ WN T
Sbjct: 244 DSENESGTGHKDSVYSVVFTRDGQSVVS---GSLDRSVKLWNLQNANNKSDSKTPNSGTC 300
Query: 725 -------GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLA- 776
V ++A +++ ++S G +L W + + L GH V+ +A
Sbjct: 301 EVTYIGHKDFVLSVATTQNDEYILS--GSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV 358
Query: 777 -----MSPDGEAIVTGAGDETLRFWNV 798
+ P+ TG+GD R W
Sbjct: 359 ANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 69.4 bits (168), Expect = 5e-13
Identities = 54/282 (19%), Positives = 104/282 (36%), Gaps = 40/282 (14%)
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL------------------VGHT 597
+ V V ++ G +A G + QV+ VS V +L
Sbjct: 63 SVVCCVKFSNDGEYLATGCN-KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSD 121
Query: 598 ARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASG 657
+ ++ ++ D + L R N + L GH Q++ L + P L SG
Sbjct: 122 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSG 181
Query: 658 GNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ 717
D + +W+L + T + + A G+ DR +R W++ TG
Sbjct: 182 SGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAA---GSLDRAVRVWDSETGF 238
Query: 718 PMQCVDTGSQ--------VCNLAWSKHSSELVSTHG----------YSQNQILVWKYPTL 759
++ +D+ ++ V ++ +++ +VS + N+ +
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 760 TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801
T GH VL +A + + E I++G+ D + FW+ S
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 340
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 82.6 bits (202), Expect = 2e-17
Identities = 34/263 (12%), Positives = 87/263 (33%), Gaps = 22/263 (8%)
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK--QVHKLVGHTARVGALAW--NGDMLS 611
++ AWN+ +A+ ++ V +++ S K QVH+L H +V + W + + +
Sbjct: 8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67
Query: 612 SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671
+ DR ++ + ++ + ++W+P+ + A G + +
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127
Query: 672 SPLQTYTEHLAAVKAIAWSPHHHGLLA-SGGGTADRCIRFWNTLTGQPMQCVDTGSQVCN 730
+ +++ S H G+ D R ++ + +
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 187
Query: 731 LAWSKHSSELVSTHGY-----------------SQNQILVWKYPTLTQVAKLTGHSYRVL 773
+ + + E S+ G+ + + + VA L + +L
Sbjct: 188 MPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL 247
Query: 774 YLAMSPDGEAIVTGAGDETLRFW 796
+ + + G + F
Sbjct: 248 AVTFITESSLVAAGHDCFPVLFT 270
Score = 61.4 bits (147), Expect = 2e-10
Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 10/171 (5%)
Query: 638 HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP--LQTYTEHLAAVKAIAWSPHHHG 695
+ + W+ D +A N++ ++++ + EH V + W+P +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN- 64
Query: 696 LLASGGGTADRCIRFWNTLTGQPMQCVDTGSQV-CNLAWSKHSSELVSTHGYSQNQILVW 754
+ + G DR W + +E G I +
Sbjct: 65 RIVTCG--TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 122
Query: 755 KYPTLTQVAKLTGHSYR----VLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801
+ VL L P+ + G+ D R ++ + K
Sbjct: 123 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIK 173
Score = 51.0 bits (120), Expect = 3e-07
Identities = 34/308 (11%), Positives = 79/308 (25%), Gaps = 34/308 (11%)
Query: 519 VDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH 576
VDW+ S +++ G Y+W+ + + V W AVG+
Sbjct: 57 VDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS 116
Query: 577 GYVQVWDVSVAKQVHKLVGHTARVGALAWNGDML----------------------SSGS 614
+ + + + + D
Sbjct: 117 RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVE 176
Query: 615 RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL 674
+ P + V G+ +S + +A +D+ + + + +
Sbjct: 177 ERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 236
Query: 675 QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWS 734
T + A+ + L+A+G D + + V +
Sbjct: 237 ATLASETLPLLAVTFITESS-LVAAG---HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQ 292
Query: 735 KHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEA----IVTGAGD 790
+ + + + + H V +++ G+A T D
Sbjct: 293 RGLTARERFQNLDKKASSEGSAAAGAGL--DSLHKNSVSQISVLSGGKAKCSQFCTTGMD 350
Query: 791 ETLRFWNV 798
+ W+V
Sbjct: 351 GGMSIWDV 358
Score = 49.9 bits (117), Expect = 7e-07
Identities = 19/162 (11%), Positives = 53/162 (32%), Gaps = 6/162 (3%)
Query: 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT 574
+++ V +S+ + + A + + L+++ + +V + +LVA G
Sbjct: 203 WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG- 261
Query: 575 HHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERR 634
H + ++ A G + G ++ + + +
Sbjct: 262 HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN-LDKKASSEGSAAAGAGL 320
Query: 635 LVGHRQEVCGLKWSPDNQY----LASGGNDNRLYVWNLHSMS 672
H+ V + + + G D + +W++ S+
Sbjct: 321 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 362
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 79.1 bits (193), Expect = 2e-16
Identities = 58/286 (20%), Positives = 108/286 (37%), Gaps = 18/286 (6%)
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580
WSSQ ++ + + T C + G++ T + V G+ ++
Sbjct: 61 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 120
Query: 581 VWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ 640
VWD+ + +H L+GH A V + ++G + SG+ D M+ D T L GH
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCL--HTLQGHTN 178
Query: 641 EVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700
V D ++ SG D + VW++ + + + T T H + + + +L SG
Sbjct: 179 RVY--SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN---ILVSG 233
Query: 701 GGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760
AD ++ W+ TGQ +Q + ++ + ++ + +W T
Sbjct: 234 --NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 291
Query: 761 QVAKLT-----GHSYRVLYLAMSPDGEAIVTGAGDET----LRFWN 797
+ L G V + S G+ + T L +
Sbjct: 292 FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
Score = 67.5 bits (163), Expect = 1e-12
Identities = 43/209 (20%), Positives = 67/209 (32%), Gaps = 41/209 (19%)
Query: 625 RTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAV 684
R +S + L GH V + SG +DN L VW+ + L+T H V
Sbjct: 2 RRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 60
Query: 685 KAIAWSP-----------------------------------HHHGLLASGGGTADRCIR 709
+ H G+ D +R
Sbjct: 61 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 120
Query: 710 FWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS 769
W+ TGQ + + + G + VW T T + L GH+
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGRRVV---SGAYDFMVKVWDPETETCLHTLQGHT 177
Query: 770 YRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
RV + DG +V+G+ D ++R W+V
Sbjct: 178 NRVYS--LQFDGIHVVSGSLDTSIRVWDV 204
Score = 64.8 bits (156), Expect = 1e-11
Identities = 47/241 (19%), Positives = 83/241 (34%), Gaps = 16/241 (6%)
Query: 558 VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDR 617
+T + + GN + G+ ++VW K + LVGHT V + ++
Sbjct: 20 ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI----IISG 73
Query: 618 MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY 677
+ E + + + SG D L VW++ + L
Sbjct: 74 STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVL 133
Query: 678 TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHS 737
H+AAV+ + + A D ++ W+ T + + G +
Sbjct: 134 MGHVAAVRCVQYDGRRVVSGAY-----DFMVKVWDPETETCLHTL-QGHTNRVYSLQFDG 187
Query: 738 SELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797
+VS G I VW T + LTGH M +V+G D T++ W+
Sbjct: 188 IHVVS--GSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELKDNILVSGNADSTVKIWD 243
Query: 798 V 798
+
Sbjct: 244 I 244
Score = 42.5 bits (98), Expect = 2e-04
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 754 WKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800
W+ L L GH V+ + G IV+G+ D TL+ W+ +
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVT 46
Score = 34.0 bits (76), Expect = 0.060
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Query: 520 DWSSQNVLSVGLGSCVYLWSACTSQVTR---LCDLSADGNSVTSVAWNERGNLVAV---- 572
++ V++ V LW T + R + G V + + + AV
Sbjct: 267 QFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 326
Query: 573 GTHHGYVQVWDVSV 586
GT + V D V
Sbjct: 327 GTEETKLLVLDFDV 340
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 78.0 bits (190), Expect = 3e-16
Identities = 50/301 (16%), Positives = 91/301 (30%), Gaps = 60/301 (19%)
Query: 545 VTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALA 604
+ R+ S V + ++ + G +++WD + + L GHT V L
Sbjct: 5 LQRIHCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ 62
Query: 605 WNGDMLSSGSRDRMILQRDVR--------------------------------------- 625
++ ++ +GS D + DV
Sbjct: 63 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM 122
Query: 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVK 685
+ R V D++Y+ S D + VWN + ++T H +
Sbjct: 123 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 182
Query: 686 AIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHG 745
+ + G++D IR W+ + C+ L G
Sbjct: 183 CLQYRDRL-----VVSGSSDNTIRLWDI---ECGACLRVLEGHEELVRCIRFDNKRIVSG 234
Query: 746 YSQNQILVWKYPTLTQ---------VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFW 796
+I VW + L HS RV + D IV+ + D+T+ W
Sbjct: 235 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF--RLQFDEFQIVSSSHDDTILIW 292
Query: 797 N 797
+
Sbjct: 293 D 293
Score = 57.2 bits (136), Expect = 3e-09
Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 13/154 (8%)
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580
+ + ++S + +W+ T + + +G+ R LV G+ ++
Sbjct: 146 FDDKYIVSASGDRTIKVWNTSTCE----FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 201
Query: 581 VWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSE-------R 633
+WD+ + L GH V + ++ + SG+ D I D+ R
Sbjct: 202 LWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR 261
Query: 634 RLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667
LV H V L++ D + S +D+ + +W+
Sbjct: 262 TLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293
Score = 51.0 bits (120), Expect = 2e-07
Identities = 28/187 (14%), Positives = 53/187 (28%), Gaps = 37/187 (19%)
Query: 647 WSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPH-------------- 692
D+Q + SG DN + +W+ +++ + T H +V + +
Sbjct: 21 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVW 80
Query: 693 ---------------------HHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNL 731
+ DR I W+ + +
Sbjct: 81 DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA 140
Query: 732 AWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE 791
+ I VW T V L GH + + +V+G+ D
Sbjct: 141 VNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDN 198
Query: 792 TLRFWNV 798
T+R W++
Sbjct: 199 TIRLWDI 205
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 76.4 bits (186), Expect = 2e-15
Identities = 53/286 (18%), Positives = 90/286 (31%), Gaps = 13/286 (4%)
Query: 519 VDWSSQ-NVLSVGLGSCVYLWSACTS---QVTRLCDLSADGNSVTSVAWNERGNLVAVGT 574
V S+ + G CV +W D N + S G + VG
Sbjct: 57 VTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG 116
Query: 575 HHGYVQVWDVSVAKQVHKLVGHTARVGAL--AWNGDMLSSGSRDRMILQRDVRTPNSQSE 632
+ +WD++ K ++ A + D S N
Sbjct: 117 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV 176
Query: 633 RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPH 692
R+ GH + S D L +GG DN + W+ + + + ++ + P
Sbjct: 177 RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD-LREGRQLQQHDFTSQIFSLGYCPT 235
Query: 693 HHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQIL 752
G + + Q S V +L ++ VS N +
Sbjct: 236 GEW---LAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS--TGKDNLLN 290
Query: 753 VWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
W+ P + + S VL +S D + IVTG+GD+ + V
Sbjct: 291 AWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 68.3 bits (165), Expect = 7e-13
Identities = 58/269 (21%), Positives = 98/269 (36%), Gaps = 16/269 (5%)
Query: 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL-----VGHTARVGALAW--NG 607
G V +V + V G G V+VWD+S + + + + +G
Sbjct: 51 GEVVCAVTISNPTRHVYTG-GKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG 109
Query: 608 DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667
L G + D+ P + + L L SPD++ S +D + VW+
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169
Query: 668 LHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQ 727
LH+ + ++ + H I S L G D +R W+ G+ +Q D SQ
Sbjct: 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG---LDNTVRSWDLREGRQLQQHDFTSQ 226
Query: 728 VCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTG 787
+ +L + L S + + +L H VL L + G+ V+
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVE---VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVST 283
Query: 788 AGDETLRFWNV--FSKVRSQRESKSVLNL 814
D L W + + +ES SVL+
Sbjct: 284 GKDNLLNAWRTPYGASIFQSKESSSVLSC 312
Score = 62.1 bits (149), Expect = 8e-11
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 638 HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLL 697
H V LK++ ++ S G DN L W + + ++ ++V + S +
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDK-YI 321
Query: 698 ASGGGTADRCIRFWNTL 714
+G G D+ + +
Sbjct: 322 VTGSG--DKKATVYEVI 336
Score = 51.0 bits (120), Expect = 3e-07
Identities = 17/136 (12%), Positives = 38/136 (27%), Gaps = 6/136 (4%)
Query: 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE-----HL 681
P + + H + VC + S +++ +GG + VW++ ++
Sbjct: 39 PRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRD 97
Query: 682 AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV 741
+++ P L+ G + + + LA S S
Sbjct: 98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF 157
Query: 742 STHGYSQNQILVWKYP 757
S +
Sbjct: 158 SCCSDGNIAVWDLHNQ 173
Score = 40.2 bits (92), Expect = 8e-04
Identities = 16/119 (13%), Positives = 30/119 (25%), Gaps = 10/119 (8%)
Query: 645 LKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTA 704
+ D Q + L + + H V A+ S + +GG
Sbjct: 15 FHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTR-HVYTGG--- 70
Query: 705 DRCIRFWNTLTGQPMQCVDT------GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP 757
C++ W+ V + + + L+ S I P
Sbjct: 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP 129
Score = 34.4 bits (77), Expect = 0.052
Identities = 8/54 (14%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Query: 745 GYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
+ + ++ P + H V + +S + TG G ++ W++
Sbjct: 27 PFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTG-GKGCVKVWDI 79
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 74.1 bits (180), Expect = 1e-14
Identities = 27/284 (9%), Positives = 73/284 (25%), Gaps = 22/284 (7%)
Query: 532 GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591
G + ++ T + + + + +V ++ + G V + D+ K
Sbjct: 65 GDFLGIYDYRTGKAEKFEE---NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV 121
Query: 592 KLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQS---------ERRLVGHRQEV 642
A + + + +
Sbjct: 122 IERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHD 181
Query: 643 CGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGG 702
+ D++ L + + ++ + I SP+ L+
Sbjct: 182 YAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMT 241
Query: 703 TADRCIRFWNTLTGQPMQCVDTGSQVCNLA--------WSKHSSELVSTHGYSQNQILVW 754
+ + VD G + E + + + + ++
Sbjct: 242 SEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLL 301
Query: 755 KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
KY T+ K+T + L +S D + ++ D + + +
Sbjct: 302 KYDVKTR--KVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPL 343
Score = 57.6 bits (137), Expect = 3e-09
Identities = 19/216 (8%), Positives = 56/216 (25%), Gaps = 13/216 (6%)
Query: 606 NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND--NRL 663
+GD+++ SR + +Q S + V + ++ D + G + L
Sbjct: 14 DGDLIAFVSRGQAFIQ-----DVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFL 68
Query: 664 YVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD 723
+++ + + + E+L V A+ + + + + + +
Sbjct: 69 GIYDYRT-GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE 127
Query: 724 TG-----SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMS 778
+ + Q + ++ T + A
Sbjct: 128 AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFD 187
Query: 779 PDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNL 814
D + + + + S +
Sbjct: 188 ADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVI 223
Score = 54.1 bits (128), Expect = 3e-08
Identities = 21/170 (12%), Positives = 46/170 (27%), Gaps = 20/170 (11%)
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQ-----VTRLCDLSADGNSVTSVAWNERGNLVAVGTH 575
S+N+ + S V++ + S R G +
Sbjct: 188 ADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEY 247
Query: 576 HG-------YVQVWDVSVAKQVHKLVGHTARVGALAWNGD--MLSSGSRDRMILQRDVRT 626
D + + L ++L+ DV+T
Sbjct: 248 DLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT 307
Query: 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT 676
R++ + + L+ S D + + +D ++Y + L +T
Sbjct: 308 ------RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERT 351
Score = 50.6 bits (119), Expect = 5e-07
Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 20/246 (8%)
Query: 567 GNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGD---MLSSGSRDRMILQRD 623
G+L+A G + DVS + V R+ + GD G+R+ L
Sbjct: 15 GDLIAF-VSRGQAFIQDVSGTYVLK--VPEPLRIRYVRRGGDTKVAFIHGTREGDFLG-- 69
Query: 624 VRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAA 683
+ + + + V + + ++ + + +L + P A
Sbjct: 70 IYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM 129
Query: 684 VKAIAWSPHHHGLLASGGG-------TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKH 736
+ S + + + I ++ + S A+
Sbjct: 130 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDAD 189
Query: 737 SSELVSTHGYS-----QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE 791
S L S +L + + +++ + + P G D
Sbjct: 190 SKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL 249
Query: 792 TLRFWN 797
+
Sbjct: 250 NDMYKR 255
Score = 40.2 bits (92), Expect = 8e-04
Identities = 14/161 (8%), Positives = 45/161 (27%), Gaps = 13/161 (8%)
Query: 647 WSP-DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705
+SP D +A + ++ ++ L+ ++ + + G
Sbjct: 10 FSPLDGDLIAFVSRG-QAFIQDVSGTYVLK--VPEPLRIRYVRRGG-DTKVAFIHGTREG 65
Query: 706 RCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ---- 761
+ ++ TG+ + + V + ++ V + + + + T
Sbjct: 66 DFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS 125
Query: 762 ----VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
+ T P G + + +++
Sbjct: 126 REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 166
Score = 33.3 bits (74), Expect = 0.11
Identities = 7/59 (11%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Query: 535 VYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593
+ + T +VT + + ++T + + V V G + + + + +
Sbjct: 300 LLKYDVKTRKVTEVKN------NLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 72.7 bits (177), Expect = 4e-14
Identities = 23/315 (7%), Positives = 58/315 (18%), Gaps = 42/315 (13%)
Query: 497 ISRIPFKVLDAPELQDDF-YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDL---- 551
+ L L S V ++ T +L
Sbjct: 59 LGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP 118
Query: 552 -SADGNSVTSVAWNERGNLVAVGTH-HGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDM 609
+ G V + + V A +
Sbjct: 119 RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASC-FHIHPGAAAT 177
Query: 610 LSSGSRDRMILQRDVRTPNSQ----SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYV 665
GS + D+ + + + + + + +
Sbjct: 178 HYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGD 237
Query: 666 WNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG 725
+ + + KA + ++A + T+
Sbjct: 238 IPAAGATMKAAIDGNESGRKADNFRSAGFQMVA---KLKNTDGIMILTVEHS-------- 286
Query: 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE--A 783
+ + ++ + + + + DG
Sbjct: 287 ----------------RSCLAAAENTSSVTASVGQTSGPIS-NGHDSDAIIAAQDGASDN 329
Query: 784 IVTGAGDETLRFWNV 798
AG E L ++
Sbjct: 330 YANSAGTEVLDIYDA 344
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 71.4 bits (173), Expect = 7e-14
Identities = 33/308 (10%), Positives = 83/308 (26%), Gaps = 38/308 (12%)
Query: 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDV 584
+L+ + + V ++ ++ G + G + + D+
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 585 SVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRT----------------PN 628
+ + ++ T + G LS + I + VR
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIA 688
+ S R+ +++ L W+ D L G D + ++ + A A
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQP 183
Query: 689 WSPHHHGLLASGG------------------GTADRCIRFWNTLTGQPMQCVDTGSQVCN 730
S G + + TG+ V
Sbjct: 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFY 243
Query: 731 LAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD 790
+ + + ++ + + N + + + ++ + + +S DG + G
Sbjct: 244 FSTAVNPAK--TRAFGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGAL 300
Query: 791 ETLRFWNV 798
L ++
Sbjct: 301 GDLAAYDA 308
Score = 55.2 bits (131), Expect = 1e-08
Identities = 23/247 (9%), Positives = 60/247 (24%), Gaps = 5/247 (2%)
Query: 446 VIFSPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVL 505
SPD + L Y + P ++ ++ ++ + +
Sbjct: 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDG 146
Query: 506 DAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNS-VTSVAWN 564
+ + V + S A + + G
Sbjct: 147 SKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTAR 206
Query: 565 ERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAWNGDMLSSGSRDRMILQRD 623
+ + + + D+ + + V + A N + ++ D
Sbjct: 207 KDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFD 266
Query: 624 VRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAA 683
+ + + V + S D + GG L ++ ++ A
Sbjct: 267 LEK---NASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNA 323
Query: 684 VKAIAWS 690
++A
Sbjct: 324 SMSLASV 330
Score = 52.5 bits (124), Expect = 9e-08
Identities = 24/206 (11%), Positives = 47/206 (22%), Gaps = 19/206 (9%)
Query: 608 DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL-ASGGNDNRLYVW 666
D + + +R ++ D + +P + A+ L
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 667 NLHSMSPLQTYTEHLAAVK-----AIAWSPHHHGLLASGGGTADR---------CIRFWN 712
+L + L + A SP L + ++
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 713 TLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRV 772
T + + Q+ LAW++ S+L V T V S+
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLH----VMDPEAGTLVEDKPIQSWEA 177
Query: 773 LYLAMSPDGEAIVTGAGDETLRFWNV 798
A +
Sbjct: 178 ETYAQPDVLAVWNQHESSGVMATPFY 203
Score = 51.3 bits (121), Expect = 2e-07
Identities = 23/172 (13%), Positives = 49/172 (28%), Gaps = 19/172 (11%)
Query: 652 QYLASGGNDNRLYVWNLHSMSPLQTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIR 709
Y+ + ++L V + M+ + T + +P A+ +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK--SESLV 59
Query: 710 FWNTLTGQPMQCVDTGSQVCN---------------LAWSKHSSELVSTHGYSQNQILVW 754
+ +TG+ + +D + LA + L TH Q +
Sbjct: 60 KIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119
Query: 755 KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806
K ++ LA + DG + D + + V +
Sbjct: 120 YDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKP 171
Score = 42.5 bits (98), Expect = 1e-04
Identities = 35/292 (11%), Positives = 71/292 (24%), Gaps = 24/292 (8%)
Query: 446 VIFSPDRRNLF--------QYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKI 497
+ +P R + + + + SP T I
Sbjct: 39 PMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAI 98
Query: 498 SRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNS 557
P ++ + L D + + A ++L L D +
Sbjct: 99 YESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLH- 157
Query: 558 VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVG-----ALAWNGDMLSS 612
V E G LV + ++ V + D
Sbjct: 158 ---VMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP 214
Query: 613 GSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS 672
+ +L D+ T R + +P N L ++L +
Sbjct: 215 TAYRTGLLTMDLETGEMAM-REVRIMDVFYFSTAVNPAKTRAFG--AYNVLESFDLEKNA 271
Query: 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT 724
++ + ++ S + GG A + ++ T + VD
Sbjct: 272 SIKR-VPLPHSYYSVNVSTDGS-TVWLGG--ALGDLAAYDAETLEKKGQVDL 319
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 68.0 bits (164), Expect = 9e-13
Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 28/280 (10%)
Query: 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV---GHTARVGALAWNG 607
A + ++ + +L+ + + G + V+ + + L+ + + +
Sbjct: 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID 66
Query: 608 D---MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLY 664
+ + G+ IL+ D+ S + L + D +
Sbjct: 67 NTDLQIYVGTVQGEILKVDLIGSPSFQALT-NNEANLGICRICKYGDDKLIAASWDGLIE 125
Query: 665 VWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGG---GTADRCIRFWNTLTGQPMQC 721
V + + ++L + + S G + ++++ +
Sbjct: 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185
Query: 722 VDTGSQVCNLAWSKHSS------------------ELVSTHGYSQNQILVWKYPTLTQVA 763
S + E G N + +
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245
Query: 764 KLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803
K T +Y V + SP + + T D + WN+ ++ +
Sbjct: 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285
Score = 47.9 bits (112), Expect = 3e-06
Identities = 14/108 (12%), Positives = 36/108 (33%), Gaps = 2/108 (1%)
Query: 612 SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671
D + + + V +++SP +++L + G+D + WNL +
Sbjct: 224 DDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283
Query: 672 SPLQTYTEHLAAVKAIAWSPHHHGLL-ASGGGTADRCIRFWNTLTGQP 718
++ + + + + + L A+ T T+
Sbjct: 284 KKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNA 330
Score = 45.6 bits (106), Expect = 1e-05
Identities = 23/185 (12%), Positives = 46/185 (24%), Gaps = 26/185 (14%)
Query: 605 WNGDMLSSGSRDRMILQRDVRTPNSQSERRLVG--HRQEVCGLKWSPDNQYLASGGNDNR 662
N L G + + + + Q + + A D R
Sbjct: 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR 217
Query: 663 LYVWNLHS---------------MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707
+ V T V +I +SP H L +G D
Sbjct: 218 VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS---DGI 274
Query: 708 IRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG 767
I WN T + ++ ++ + + + L + T +
Sbjct: 275 ISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSD--DTFKTNAAIDQT----IEL 328
Query: 768 HSYRV 772
++ +
Sbjct: 329 NASSI 333
Score = 39.8 bits (91), Expect = 9e-04
Identities = 9/88 (10%), Positives = 21/88 (23%), Gaps = 7/88 (7%)
Query: 671 MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN----TLTGQPMQCVDTGS 726
M +Q + I P LL D + + +Q +
Sbjct: 1 MQIVQIEQAPKDYISDIKIIPSKS-LLLITS--WDGSLTVYKFDIQAKNVDLLQSLRYKH 57
Query: 727 QVCNLAWSKHSSELVSTHGYSQNQILVW 754
+ + ++ + + V
Sbjct: 58 PLLCCNFIDNTDLQIYVGTVQGEILKVD 85
Score = 35.6 bits (80), Expect = 0.020
Identities = 4/37 (10%), Positives = 12/37 (32%)
Query: 762 VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
V + + + P ++ + D +L +
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKF 40
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 68.0 bits (164), Expect = 1e-12
Identities = 40/362 (11%), Positives = 96/362 (26%), Gaps = 72/362 (19%)
Query: 519 VDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG-----------NSVTSVAWNERG 567
V + +S + +W D S
Sbjct: 20 VSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFEL 79
Query: 568 NLVAVGTHHGYVQVWDVSVAKQVHKLVGHT----------ARVGALAWNGD-------ML 610
LVA + G + + ++ + K++ AL W L
Sbjct: 80 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRL 139
Query: 611 SSGSRDRMILQRDVRTPNSQ----------------SERRLVGHRQEVCGLKWSPDNQYL 654
+ + + + Q + S +
Sbjct: 140 VATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LI 198
Query: 655 ASGGNDNRLYVWN------LHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCI 708
A+G N+ + + L++ + + +++++ +SP L + + CI
Sbjct: 199 ATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCI 258
Query: 709 RFWNTLTGQPMQCVDTGSQ--------------VCNLAWSKHSSELVSTHGYSQNQILVW 754
+ T G+ + + + V +L+++ L ++ W
Sbjct: 259 TLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC--SAGWDGKLRFW 316
Query: 755 KYPTLTQVAKLTGHSYRVLY----LAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKS 810
T ++ L H + LA+ G+++ G ++F + +
Sbjct: 317 DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP-GVFDVKFLKKGWRSGMGADLNE 375
Query: 811 VL 812
L
Sbjct: 376 SL 377
Score = 59.9 bits (143), Expect = 6e-10
Identities = 23/228 (10%), Positives = 57/228 (25%), Gaps = 31/228 (13%)
Query: 581 VWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSER----RLV 636
+ + K H A + +++ S S D + D + ++++ +
Sbjct: 4 IATANAGK------AHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF 57
Query: 637 GHRQEV-------CGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAW 689
H+ + + + + +A+ L + + + +
Sbjct: 58 VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDM 117
Query: 690 SPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQN 749
H L G V + + S ++ +
Sbjct: 118 KKHSFWALKWGASNDRLLSHRLVATD------VKGTTYIWKFHPFADESNSLTLN----- 166
Query: 750 QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797
V S + +S G I TG + T++
Sbjct: 167 --WSPTLELQGTVESPMTPSQFATSVDISERGL-IATGFNNGTVQISE 211
Score = 59.5 bits (142), Expect = 8e-10
Identities = 39/310 (12%), Positives = 84/310 (27%), Gaps = 73/310 (23%)
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK------QVHKLVGHTARVGALAW---- 605
+ SV+ + + GY++VWD + + + H + + +
Sbjct: 15 ADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAI 72
Query: 606 -----NGDMLSSGSRDRMILQRDVRTPNSQSE--------RRLVGHRQEVCGLKWSPD-- 650
++++ S +L + + + + LKW
Sbjct: 73 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 132
Query: 651 ---NQYLASGGNDNRLYVWNLHSMSP------------------LQTYTEHLAAVKAIAW 689
+ L + Y+W H + +++ ++
Sbjct: 133 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI 192
Query: 690 SPHHHGLLASGGGTADRCIR---FWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTH-- 744
S GL+A+G + ++ + + N S S S
Sbjct: 193 SER--GLIATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAI 248
Query: 745 GYSQNQILVWKY----------------PTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA 788
+ N + HS V+ L+ + GE + +
Sbjct: 249 AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 308
Query: 789 GDETLRFWNV 798
D LRFW+V
Sbjct: 309 WDGKLRFWDV 318
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 66.1 bits (159), Expect = 4e-12
Identities = 38/205 (18%), Positives = 66/205 (32%), Gaps = 3/205 (1%)
Query: 558 VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-NGDMLSSGSRD 616
+T + + N V G ++V+D K + +L GH V AL + +G +L SGS D
Sbjct: 16 ITCLQFE--DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTD 73
Query: 617 RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT 676
R + D++ + + +Y+ +G DN L+VW L S +
Sbjct: 74 RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPD 133
Query: 677 YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKH 736
+ E + + G D V ++A K
Sbjct: 134 HGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKC 193
Query: 737 SSELVSTHGYSQNQILVWKYPTLTQ 761
L + I +
Sbjct: 194 LYILSGHTDRIYSTIYDHERKRCIS 218
Score = 64.1 bits (154), Expect = 2e-11
Identities = 25/145 (17%), Positives = 47/145 (32%), Gaps = 4/145 (2%)
Query: 635 LVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHH 694
L GH V ++ Y+ +G +D + V++ + L + H V A+ ++
Sbjct: 8 LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH--G 64
Query: 695 GLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVW 754
G+L SG + + + C + + + G N + VW
Sbjct: 65 GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYI-VTGSRDNTLHVW 123
Query: 755 KYPTLTQVAKLTGHSYRVLYLAMSP 779
K P + V L
Sbjct: 124 KLPKESSVPDHGEEHDYPLVFHTPE 148
Score = 46.0 bits (107), Expect = 1e-05
Identities = 37/302 (12%), Positives = 80/302 (26%), Gaps = 32/302 (10%)
Query: 519 VDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGY 578
+ + V++ + ++ + + L LS V ++ + G LV+ T
Sbjct: 19 LQFEDNYVITGADDKMIRVYDSINKKF--LLQLSGHDGGVWALKYAHGGILVSGSTDRTV 76
Query: 579 VQVWDVSVAKQVHKLVGHTARVGALAWNGDMLS---SGSRDRMILQRDVRTPNSQSERRL 635
++ + +GSRD + + +S +
Sbjct: 77 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGE 136
Query: 636 VGHRQEVCGLKWSPDNQ-------------------YLASGGNDNRLYVWNLHSMSPLQT 676
V + SG DN L VW++ M L
Sbjct: 137 EHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYI 196
Query: 677 YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKH 736
+ H + + + + D IR W+ G+ M + + + L
Sbjct: 197 LSGHTDRIYSTIYDHERKRC---ISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD 253
Query: 737 SSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFW 796
+ + S Y H + + + I+ + +
Sbjct: 254 KFLVSAAADGSIRGWDANDYSRKFSY-----HHTNLSAITTFYVSDNILVSGSENQFNIY 308
Query: 797 NV 798
N+
Sbjct: 309 NL 310
Score = 43.7 bits (101), Expect = 5e-05
Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 3/76 (3%)
Query: 638 HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ-TYTEHLAAVKAIAWSPHHHGL 696
H + + + + G++N+ ++NL S + + + ++ + L
Sbjct: 280 HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKG--KTL 337
Query: 697 LASGGGTADRCIRFWN 712
+A+ + +
Sbjct: 338 VAAVEKDGQSFLEILD 353
Score = 42.6 bits (98), Expect = 1e-04
Identities = 42/303 (13%), Positives = 87/303 (28%), Gaps = 36/303 (11%)
Query: 519 VDWSSQNVL-SVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHG 577
+ ++ +L S V +W T + + + + + G+
Sbjct: 59 LKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDN 118
Query: 578 YVQVWDVSVAKQVHKLVG-----------------------HTARVGALAWNGDMLSSGS 614
+ VW + V H A V ++ +G+++ SGS
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 178
Query: 615 RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL 674
D ++ DV + L GH + + + + S D + +W+L + +
Sbjct: 179 YDNTLIVWDVAQM--KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 236
Query: 675 QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWS 734
T H AD IR W+ + +
Sbjct: 237 YTLQGH-----TALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFY 291
Query: 735 KHSSELVSTHGYSQNQILVWKYPTLTQV-AKLTGHSYRVLYLAMSPDGEAIVTGAGDETL 793
+ LVS S+NQ ++ + V A + + ++ + + D
Sbjct: 292 VSDNILVSG---SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQS 347
Query: 794 RFW 796
Sbjct: 348 FLE 350
Score = 41.4 bits (95), Expect = 3e-04
Identities = 41/247 (16%), Positives = 82/247 (33%), Gaps = 12/247 (4%)
Query: 512 DDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVA 571
D L++ ++ + Y T + G+ + + GN+V
Sbjct: 116 RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVV 175
Query: 572 VGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQS 631
G++ + VWDV+ K ++ L GHT R+ + ++ + S R N +
Sbjct: 176 SGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL 235
Query: 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSP 691
L GH V L+ S A + + + ++ H + AI
Sbjct: 236 MYTLQGHTALVGLLRLSDKFLVSA----AADGSIRGWDANDYSRKFSYHHTNLSAITTFY 291
Query: 692 HHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG--SQVCNLAWSKHSSELVSTHGYSQN 749
+L SG + +N +G+ + Q+ ++ + LV+
Sbjct: 292 VSDNILVSGS---ENQFNIYNLRSGKLVHANILKDADQIWSVNFK--GKTLVAA-VEKDG 345
Query: 750 QILVWKY 756
Q +
Sbjct: 346 QSFLEIL 352
Score = 34.5 bits (77), Expect = 0.052
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 761 QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801
Q L GH V + + ++TGA D+ +R ++ +K
Sbjct: 4 QRTTLRGHMTSV-ITCLQFEDNYVITGADDKMIRVYDSINK 43
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 66.4 bits (161), Expect = 5e-12
Identities = 29/261 (11%), Positives = 71/261 (27%), Gaps = 21/261 (8%)
Query: 577 GYVQVWDVSVAKQVHKL-VGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRL 635
G + + D S + L G+ + L+ +G L RD + D+ + +
Sbjct: 42 GQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI 101
Query: 636 ---VGHRQEVCGLKWSPDNQYL-ASGGNDNRLYVWNLHSMSPLQTYTEHLAAV------- 684
R +++Y A + + + ++ P + +
Sbjct: 102 KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHP 161
Query: 685 ----KAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSEL 740
AI S + + + T + + L + + +
Sbjct: 162 EPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYF 221
Query: 741 VSTHGYSQNQILVW----KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA-GDETLRF 795
++ +++ K + T H R G T GD+++
Sbjct: 222 ITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVAL 281
Query: 796 WNVFSKVRSQRESKSVLNLFS 816
+ K + + +
Sbjct: 282 IGTDPEGHPDNAWKILDSFPA 302
Score = 41.7 bits (97), Expect = 3e-04
Identities = 20/179 (11%), Positives = 45/179 (25%), Gaps = 19/179 (10%)
Query: 636 VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPH-HH 694
R W +N + + + ++ + + + AV S +
Sbjct: 17 PEDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRY 75
Query: 695 GLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSE---LVSTHGYSQNQI 751
+ G + + + + GS+ ++ SK Y Q
Sbjct: 76 LFVIGRDGKVN--MIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQY 133
Query: 752 LVW-----------KYPTLTQVAKLTGHSYRVLYLAMSPDG-EAIVTGAGDETLRFWNV 798
++ +T + RV + S E IV + +
Sbjct: 134 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDY 192
Score = 41.7 bits (97), Expect = 3e-04
Identities = 32/295 (10%), Positives = 64/295 (21%), Gaps = 32/295 (10%)
Query: 537 LWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDVSVAKQVH---- 591
LW + V + S + TS + D +
Sbjct: 90 LWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST 149
Query: 592 -------KLVGHTARVGALAWNGD---MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE 641
+ RV A+ + + + IL D N+ + R
Sbjct: 150 RGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERF- 208
Query: 642 VCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPH----HHGLL 697
+ ++Y + N V L + + G +
Sbjct: 209 LHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPV 268
Query: 698 ASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP 757
+ D + T P D ++ N ++
Sbjct: 269 WATSHMGDDSVALIGT---DPEGHPDNAWKIL--DSFPALGGGSLFIKTHPNSQYLY--- 320
Query: 758 TLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVL 812
A L + +A D +A+ D + + V+
Sbjct: 321 ---VDATLNPEAEISGSVA-VFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV 371
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 65.2 bits (157), Expect = 9e-12
Identities = 34/311 (10%), Positives = 75/311 (24%), Gaps = 57/311 (18%)
Query: 535 VYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV----------GTHHGYVQVWDV 584
++ +V DG + + + G+ +A G YV+V+D
Sbjct: 30 QFVIDGEAGRVIG----MIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 85
Query: 585 SVAKQVHKLVGHTARVGALAWNGDMLS-----------SGSRDRMILQRDVRTPN----- 628
+ A + M S S + D+
Sbjct: 86 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML 145
Query: 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGG-NDNRLYVWNLHSMSPLQTYTEHLAAVKAI 687
+ + D + + + P +
Sbjct: 146 DVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE-----DEFLINHP 200
Query: 688 AWSPHHHGLLASGGG-------TADRCIRFWNTLTGQPMQCVDTGSQVCN---LAWSKHS 737
A+S L+ + +F + G + +A+ +
Sbjct: 201 AYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 260
Query: 738 SEL--------VSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE--AIVTG 787
+ H + ++V T ++AK + + +S D +
Sbjct: 261 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALS 319
Query: 788 AGDETLRFWNV 798
GD+TL +
Sbjct: 320 TGDKTLYIHDA 330
Score = 63.3 bits (152), Expect = 3e-11
Identities = 32/297 (10%), Positives = 72/297 (24%), Gaps = 31/297 (10%)
Query: 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTR-----LCDLSADGNSVTSVAWNERGNL 569
++ + V ++ T T G + G
Sbjct: 60 FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKT 119
Query: 570 V--AVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTP 627
+ + V V D+ L D RD + + T
Sbjct: 120 LLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YHIFPTAPDTFFMHCRDGSLAKVAFGTE 178
Query: 628 NSQSERRL----VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP--LQTYTEHL 681
+ + +S L +++ +L S L
Sbjct: 179 GTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALT 238
Query: 682 AAVKAIAWSPHHHGLLASGG-----------------GTADRCIRFWNTLTGQPMQCVDT 724
A +A W P +A TA R + + TG+ + +
Sbjct: 239 EAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM 298
Query: 725 GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDG 781
G ++ ++ S+ L+ + + + ++ + + + + G
Sbjct: 299 GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
Score = 32.5 bits (72), Expect = 0.19
Identities = 14/111 (12%), Positives = 31/111 (27%), Gaps = 11/111 (9%)
Query: 684 VKAIAWSPHHHGLLAS--GGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV 741
A +P + + A + G+ + +D G + N + S +
Sbjct: 4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGF-LPNPVVADDGSFIA 62
Query: 742 ST--------HGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAI 784
G + + V+ TL A + + P ++
Sbjct: 63 HASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL 113
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 62.6 bits (150), Expect = 5e-11
Identities = 32/266 (12%), Positives = 67/266 (25%), Gaps = 20/266 (7%)
Query: 556 NSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQ--VHKLVGH-TARVGALAW----NG 607
N T ++++ N +A +V+ D +K V + GH ++ V + +
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77
Query: 608 DMLSSGSRDRMILQRDVRTPNSQSERRLV------GHRQEVCGLKWSPDNQYLASGGN-- 659
L SG ++ + + + + W + + L G
Sbjct: 78 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR 137
Query: 660 DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM 719
DN + S + L + H + A + G
Sbjct: 138 DNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS 197
Query: 720 QCVDTGSQVCNLA----WSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYL 775
+ + L + ++
Sbjct: 198 DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFA 257
Query: 776 AMSPDGEAIVTGAGDETLRFWNVFSK 801
D + T D T+R W+V +
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTS 283
Score = 49.5 bits (116), Expect = 7e-07
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 638 HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT--EHLAAVKAIAWSPHHHG 695
Q D+Q A+ G D + VW++ + +Q +T + + + +G
Sbjct: 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG 309
Query: 696 LLASGGGTADRCIRFWN 712
+ S D + F+
Sbjct: 310 RIISLS--LDGTLNFYE 324
Score = 48.8 bits (114), Expect = 2e-06
Identities = 23/148 (15%), Positives = 46/148 (31%), Gaps = 16/148 (10%)
Query: 638 HRQEVCGLKWSPDNQYLASG-GNDNRLYVWNLHSMS--PLQTYTEHL-AAVKAIAWSPHH 693
R L + P +A G + + P+ +T H + V + +SP
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 694 HG-LLASGGGTADRCIRFWNTLTGQPMQCVDT---------GSQVCNLAWSKHSSELVST 743
L SG + W + V+ + +++W L
Sbjct: 76 GSQYLCSGD--ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 133
Query: 744 HGYSQNQILVWKYPTLTQVAKLTGHSYR 771
N + + + + +++GHS R
Sbjct: 134 GEGRDNFGVFISWDSGNSLGEVSGHSQR 161
Score = 41.4 bits (95), Expect = 3e-04
Identities = 11/65 (16%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Query: 605 WNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD-NQYLASGGNDNRL 663
+ ++ D I DV T + L + + N + S D L
Sbjct: 261 LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTL 320
Query: 664 YVWNL 668
+ L
Sbjct: 321 NFYEL 325
Score = 35.3 bits (79), Expect = 0.022
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
Query: 562 AWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVG----ALAWNGD-MLSSGSRD 616
A ++VWDV+ +K V K ++G + G+ + S S D
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 317
Query: 617 RMI 619
+
Sbjct: 318 GTL 320
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 60.7 bits (145), Expect = 2e-10
Identities = 33/255 (12%), Positives = 68/255 (26%), Gaps = 9/255 (3%)
Query: 552 SADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDM 609
+ + G+ + V V H+ + +G
Sbjct: 14 RTARGTAVVLGNTPAGDKIQYCNGTS-VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYY 72
Query: 610 LSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669
+SG + D + + V + W +++ +A+ G +
Sbjct: 73 CASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL 132
Query: 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVC 729
+ A + G+ D + + + ++
Sbjct: 133 FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV 192
Query: 730 NLAWSKHSSELVSTHGYSQNQILV------WKYPTLTQVAKLTGHSYRVLYLAMSPDGEA 783
+ L ++ G +L K HS V L SPDG
Sbjct: 193 HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK 252
Query: 784 IVTGAGDETLRFWNV 798
I + + D+T++ WNV
Sbjct: 253 IASASADKTIKIWNV 267
Score = 53.8 bits (127), Expect = 3e-08
Identities = 35/284 (12%), Positives = 76/284 (26%), Gaps = 15/284 (5%)
Query: 525 NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYV--QVW 582
+ + G+ VY + T + + + T + G A G HG V
Sbjct: 30 DKIQYCNGTSVYTVPVGSLTDTEI--YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDT 87
Query: 583 DVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEV 642
+ + + V ++W+ + + + Q
Sbjct: 88 TQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQAR 147
Query: 643 CGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGG 702
+ + + P + + K + ++
Sbjct: 148 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAST 207
Query: 703 TADRCIRFWNTLTGQPMQ--------CVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVW 754
D I +N + G V V L WS +++ S + I +W
Sbjct: 208 GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS--ASADKTIKIW 265
Query: 755 KYPTLTQVAKLTGHS-YRVLYLAMSPDGEAIVTGAGDETLRFWN 797
TL + + L + +A+V+ + + + F N
Sbjct: 266 NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 40.7 bits (93), Expect = 5e-04
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 605 WNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLY 664
+G ++S S D+ I +V T + VG R E L Q L S + +
Sbjct: 248 PDGTKIASASADKTIKIWNVAT-LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFIN 306
Query: 665 VWNL 668
N
Sbjct: 307 FVNP 310
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 60.1 bits (144), Expect = 3e-10
Identities = 23/313 (7%), Positives = 63/313 (20%), Gaps = 43/313 (13%)
Query: 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDV 584
++ + +++ + V + C + D + V H+G + D+
Sbjct: 11 MIVTNYPNNLHVVDVASDTVYKSCVM-PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDL 69
Query: 585 SVAKQVHKLV--------------------GHTARVGALAWNGDMLSSGSRDRMILQRDV 624
K G + +
Sbjct: 70 DTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFST 129
Query: 625 RTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ--------- 675
R ++V ++ + D +G + ++ V L
Sbjct: 130 ADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGY 189
Query: 676 ----------TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG 725
+ + + TG+
Sbjct: 190 SAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD 249
Query: 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIV 785
+ + + N++ + + + +A G+ +
Sbjct: 250 LTELYFTGLRSPKDPNQIY-GVLNRLAKYDLKQRKLIKAA-NLDHTYYCVAFDKKGDKLY 307
Query: 786 TGAGDETLRFWNV 798
G L +N
Sbjct: 308 LGGTFNDLAVFNP 320
Score = 59.0 bits (141), Expect = 8e-10
Identities = 25/182 (13%), Positives = 52/182 (28%), Gaps = 12/182 (6%)
Query: 644 GLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT-EHLAAVKAIAWSPHHHGLLASGGG 702
G ++Y+ N L+V ++ S + ++ +P +
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 703 TADRCIRFWNTLTGQPMQCV-------DTGSQVCNLAWSKHSSELVSTHGYSQNQILV-- 753
I + T + + G + + A S E+ +T +Q
Sbjct: 61 --YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV 118
Query: 754 WKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLN 813
K P L + G + + P ++ A D +L + K +
Sbjct: 119 VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVA 178
Query: 814 LF 815
L
Sbjct: 179 LP 180
Score = 48.6 bits (114), Expect = 2e-06
Identities = 28/239 (11%), Positives = 62/239 (25%), Gaps = 34/239 (14%)
Query: 514 FYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVG 573
Y + N V + ++S + V + + G+L G
Sbjct: 103 VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG 162
Query: 574 THHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDML----------------------- 610
+ V + + + R G A +
Sbjct: 163 PDIYKMDVKTGKYTVALP--LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK 220
Query: 611 ---SSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667
++ L D++T + + + + SP + G NRL ++
Sbjct: 221 QDPATADLLYGYLSVDLKTGKTHT-QEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYD 278
Query: 668 LHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS 726
L ++ +A+ L GG + +N T + ++ +
Sbjct: 279 LKQRKLIKAA-NLDHTYYCVAFDKKGD-KLYLGG--TFNDLAVFNPDTLEKVKNIKLPG 333
Score = 47.4 bits (111), Expect = 4e-06
Identities = 23/238 (9%), Positives = 61/238 (25%), Gaps = 10/238 (4%)
Query: 446 VIFSPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPR--KATRKISRIPFK 503
SPD + ++ + + + P L + R R++ +
Sbjct: 94 FAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAA 153
Query: 504 VLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG---NSVTS 560
+ + + + + +++ L + + + S T
Sbjct: 154 DDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTI 213
Query: 561 VAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTAR--VGALAWNGDMLSSGSRDRM 618
+ + A D+ K + L D
Sbjct: 214 ARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNR 273
Query: 619 ILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT 676
+ + D++ + + + + L GG N L V+N ++ ++
Sbjct: 274 LAKYDLKQ---RKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKN 328
Score = 38.2 bits (87), Expect = 0.003
Identities = 9/82 (10%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 512 DDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVA 571
+ Y + G+ + + + ++ + +L ++ VA++++G+ +
Sbjct: 251 TELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANL---DHTYYCVAFDKKGDKLY 307
Query: 572 VGTHHGYVQVWDVSVAKQVHKL 593
+G + V++ ++V +
Sbjct: 308 LGGTFNDLAVFNPDTLEKVKNI 329
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 58.8 bits (140), Expect = 8e-10
Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 1/126 (0%)
Query: 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE-HLAAVKAIAWS 690
++ GH + + L S D + L S + + W++ + + + + H + I +
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
Query: 691 PHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQ 750
S + + SQ LA S V+
Sbjct: 65 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAI 124
Query: 751 ILVWKY 756
K
Sbjct: 125 YSHGKL 130
Score = 53.8 bits (127), Expect = 3e-08
Identities = 31/285 (10%), Positives = 73/285 (25%), Gaps = 42/285 (14%)
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAWNGDM--LSS 612
++T+++ + G + G++ WD+S H + + +
Sbjct: 13 KAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTV 72
Query: 613 GSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS 672
D + + + S+ + GL S D + + +
Sbjct: 73 SWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTE 132
Query: 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGG----TADRCIRFWNTLTGQPMQCVDTGSQV 728
+Y A+ G + A + + +
Sbjct: 133 VPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGA 192
Query: 729 CNLAWSKHSSELVSTH---------------------------------GYSQNQILVW- 754
+A + + + G N ++VW
Sbjct: 193 FLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWN 252
Query: 755 -KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
P+ + H+ + + + IV+ D ++FWNV
Sbjct: 253 MNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 38.8 bits (88), Expect = 0.002
Identities = 7/34 (20%), Positives = 17/34 (50%)
Query: 765 LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
GH+ + L+ S DG+ + + + + W++
Sbjct: 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDI 41
Score = 33.4 bits (74), Expect = 0.11
Identities = 7/62 (11%), Positives = 18/62 (29%)
Query: 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWD 583
+ + L + V +W+ + A S + + ++ W+
Sbjct: 237 VRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
Query: 584 VS 585
V
Sbjct: 297 VP 298
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 54.9 bits (130), Expect = 1e-08
Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 8/266 (3%)
Query: 535 VYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDVSVAKQVHKL 593
+ + +++VT + G++ + G V V H V + D + V
Sbjct: 14 ISVIDVTSNKVTATIPV---GSNPMGAVISPDGTKVYVANAHSNDVSIIDTA-TNNVIAT 69
Query: 594 VGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQY 653
V + +A + D + V S + V + GL SPD +
Sbjct: 70 VPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKK 129
Query: 654 LASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT 713
L N ++ + + K IA +P + + + + T
Sbjct: 130 LYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189
Query: 714 LTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVL 773
+ V+ + + + + N + + T A++
Sbjct: 190 NSVIDTVKVEAAPSGIAVNPEGTKAYVTNVD-KYFNTVSMIDTGTNKITARIPVGP-DPA 247
Query: 774 YLAMSPDGE-AIVTGAGDETLRFWNV 798
+A++PDG+ V + T+ +
Sbjct: 248 GIAVTPDGKKVYVALSFCNTVSVIDT 273
Score = 36.0 bits (81), Expect = 0.015
Identities = 6/51 (11%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 627 PNSQSERRLVGHRQEVCGLKWSPDNQYL-ASGGNDNRLYVWNLHSMSPLQT 676
+ + + G+ +PD + + + N + V + + + T
Sbjct: 231 TGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITAT 281
Score = 32.2 bits (71), Expect = 0.23
Identities = 19/170 (11%), Positives = 40/170 (23%), Gaps = 6/170 (3%)
Query: 561 VAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDM---LSSGSRDR 617
+A + G + V + +V K V V +A D +
Sbjct: 121 LALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180
Query: 618 MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY 677
I D T + ++ + N + + + +
Sbjct: 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI 240
Query: 678 TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQ 727
IA +P + + + +T T + G
Sbjct: 241 PVG-PDPAGIAVTPDGKKVYVALSF--CNTVSVIDTATNTITATMAVGKN 287
Score = 30.2 bits (66), Expect = 0.85
Identities = 6/57 (10%), Positives = 16/57 (28%), Gaps = 1/57 (1%)
Query: 702 GTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758
+ I + + + + GS S +++ N + + T
Sbjct: 8 NSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVA-NAHSNDVSIIDTAT 63
Score = 28.3 bits (61), Expect = 4.0
Identities = 6/40 (15%), Positives = 11/40 (27%), Gaps = 1/40 (2%)
Query: 555 GNSVTSVAWNERGN-LVAVGTHHGYVQVWDVSVAKQVHKL 593
G +A G + + V V D + +
Sbjct: 243 GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 51.1 bits (120), Expect = 2e-07
Identities = 19/134 (14%), Positives = 39/134 (29%), Gaps = 2/134 (1%)
Query: 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593
L + ++ + + ++ + + +
Sbjct: 154 SFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISW 213
Query: 594 VGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQY 653
D++++GS D I V+ P + + L H+ V L W +
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP-MKIIKALNAHKDGVNNLLWETPS-T 271
Query: 654 LASGGNDNRLYVWN 667
L S G D + WN
Sbjct: 272 LVSSGADACIKRWN 285
Score = 48.8 bits (114), Expect = 1e-06
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 638 HRQEVCGLKWSPDNQYLASGGNDNRLYVWNL-HSMSPLQTYTEHLAAVKAIAWSPHHHGL 696
E + + +A+G D ++++++ M ++ H V + W
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP--ST 271
Query: 697 LASGGGTADRCIRFWNTL 714
L S G AD CI+ WN +
Sbjct: 272 LVSSG--ADACIKRWNVV 287
Score = 46.1 bits (107), Expect = 9e-06
Identities = 34/288 (11%), Positives = 65/288 (22%), Gaps = 50/288 (17%)
Query: 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDML 610
+S +T++ N + G++ G + W S Q H+ + +L +
Sbjct: 9 ISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDNSKAQE 59
Query: 611 SSGSRDRMILQRDVRTPNSQSERRL--------------------------------VGH 638
S L+ + T + + V
Sbjct: 60 YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL 119
Query: 639 RQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLA 698
+ S + + + T A I+ SP + A
Sbjct: 120 NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAA 179
Query: 699 SGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTH-------GYSQNQI 751
+ T G I
Sbjct: 180 GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 239
Query: 752 LVWKYPTLTQVAK-LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
++ ++ K L H V L +V+ D ++ WNV
Sbjct: 240 FIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286
Score = 39.6 bits (90), Expect = 0.001
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 9/107 (8%)
Query: 588 KQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKW 647
+ + + GH + AL N L SGS D I++ + H + L
Sbjct: 4 EVLKTISGHNKGITALTVNP--LISGSYDGRIMEWSSSS-------MHQDHSNLIVSLDN 54
Query: 648 SPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHH 694
S +Y + +D Q A +
Sbjct: 55 SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDD 101
Score = 36.1 bits (81), Expect = 0.012
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 11/65 (16%)
Query: 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLA 732
L+T + H + A+ +P L SG D I W++ + D + + +L
Sbjct: 5 VLKTISGHNKGITALTVNP-----LISGS--YDGRIMEWSSSSMHQ----DHSNLIVSLD 53
Query: 733 WSKHS 737
SK
Sbjct: 54 NSKAQ 58
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 49.6 bits (117), Expect = 1e-06
Identities = 34/318 (10%), Positives = 81/318 (25%), Gaps = 40/318 (12%)
Query: 518 LVDWSSQNVLSVGLGSC--VYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH 575
L D N+ SV L + L + ++ ++ D G +V + G + V
Sbjct: 25 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT---GYAVHISRMSASGRYLLVIGR 81
Query: 576 HGYVQVWDVS-----VAKQVHKLVGHT------------ARVGALAWNGDMLSSGSRDRM 618
+ + D+ ++ + A A+ + + +
Sbjct: 82 DARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 141
Query: 619 ILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL--ASGGNDNRLYVWNLHSMSPLQT 676
++ V T + + V + S ++ L V + T
Sbjct: 142 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT 201
Query: 677 YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--TGSQVCNLAWS 734
+ W H + + + + + V
Sbjct: 202 SIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVH 261
Query: 735 KHSSELVSTHGYSQNQILV-------WKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIV-- 785
+ ST I + +VA+L G L++ P +
Sbjct: 262 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVD 321
Query: 786 -----TGAGDETLRFWNV 798
+++ +++
Sbjct: 322 TTFNPDARISQSVAVFDL 339
Score = 46.1 bits (108), Expect = 1e-05
Identities = 22/178 (12%), Positives = 52/178 (29%), Gaps = 7/178 (3%)
Query: 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT-----EHL 681
+S+ +++ V + S +YL G D R+ + +L + P + E
Sbjct: 49 GDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR 108
Query: 682 AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV 741
+ + +A + T +P Q V T + +
Sbjct: 109 SVESSKFKGYEDRYTIAG--AYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVA 166
Query: 742 STHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799
+ ++ + +V + L + + G D + R++
Sbjct: 167 AIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTA 224
Score = 34.5 bits (78), Expect = 0.054
Identities = 30/272 (11%), Positives = 71/272 (26%), Gaps = 33/272 (12%)
Query: 544 QVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGAL 603
V + + A+ + G Q+ + RV A+
Sbjct: 109 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAI 168
Query: 604 AWNGDM---LSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND 660
+ + + + +L + + ++ + +G + W ++Y + N+
Sbjct: 169 IASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTS-IGAAPFLADGGWDSSHRYFMTAANN 227
Query: 661 NRLYVWNLHS---MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ 717
+ +S L + + + +G + S D I T
Sbjct: 228 SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKN 287
Query: 718 PMQCVDTGSQVCNLAWSKHSSELVSTH---------------GYSQNQILVWKYPTLTQV 762
Q +V L S + TH + V+ L
Sbjct: 288 HPQ--YAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 345
Query: 763 AKLTGHSY---------RVLYLAMSPDGEAIV 785
++ + RV+ + G+ +
Sbjct: 346 YQVLPIAEWADLGEGAKRVVQPEYNKRGDEVW 377
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 42.9 bits (99), Expect = 1e-04
Identities = 21/162 (12%), Positives = 46/162 (28%), Gaps = 5/162 (3%)
Query: 612 SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL-ASGGNDNRLYVWNLHS 670
+ + I ++ + + ++V +V + SPD +YL + R+ + +
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 671 MSPLQTYTEHLAAVKA---IAWSP-HHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS 726
T+ A + I+ + S R + L + V+
Sbjct: 69 DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD 128
Query: 727 QVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH 768
+ S + L L VA+
Sbjct: 129 GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAE 170
Score = 42.5 bits (98), Expect = 1e-04
Identities = 25/290 (8%), Positives = 64/290 (22%), Gaps = 26/290 (8%)
Query: 535 VYLWSACTSQVTRLCDLSADGNSVTSVAWNERGN-LVAVGTHHGYVQVWDVSVAKQVHKL 593
+++W+ L + V + + L V + ++
Sbjct: 16 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF 75
Query: 594 VGHTARVG-----ALAWNGDMLSSGSRDR--MILQRDVRTPNSQSERRLVGHRQEVCGLK 646
+A G + G + GS + + + R + G
Sbjct: 76 AAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANI 135
Query: 647 WSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKA------IAWSPHHHGLLASG 700
+ +R+ ++ + L + + P+
Sbjct: 136 SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN 195
Query: 701 GGTADRCIRFWNTLTGQ-----PMQCVDTGSQVCNLAWSKHSSELVSTH---GYSQNQIL 752
+ + G + + A H + + + I
Sbjct: 196 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLIT 255
Query: 753 VWKYPTLTQVAKLTGHSYRVLY---LAMSPDGE-AIVTGAGDETLRFWNV 798
V+ V G + G+ I G + + +
Sbjct: 256 VFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI 305
Score = 30.2 bits (66), Expect = 1.1
Identities = 10/63 (15%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Query: 739 ELVSTHGYSQNQILVWKYPTLTQ--VAKLTGHSYRVLYLAMSPDGEAI-VTGAGDETLRF 795
+ V QI VW + ++ +V + +SPD + V + +
Sbjct: 4 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLA 63
Query: 796 WNV 798
+ +
Sbjct: 64 YRI 66
Score = 27.5 bits (59), Expect = 7.9
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 644 GLKWSPDNQYL-ASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAW 689
G +YL A+G + + V+ + L A + W
Sbjct: 280 GFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMW 326
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 42.7 bits (99), Expect = 1e-04
Identities = 14/165 (8%), Positives = 36/165 (21%), Gaps = 24/165 (14%)
Query: 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS 585
L G V + S ++ + W G +
Sbjct: 178 YLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMH 237
Query: 586 VAKQ-VHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCG 644
HK G + + + + R + +
Sbjct: 238 KGTDGSHKDPG-----------TQVWVYDLKSKQRVARWDLAQQK---------VEPLVS 277
Query: 645 LKWSPDNQYL--ASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAI 687
++ S D++ L + + V + + + + +
Sbjct: 278 IQVSEDDKPLFYGLTATSDLV-VMDARTGALQHVEKQIGNTSSLL 321
Score = 42.3 bits (98), Expect = 1e-04
Identities = 14/162 (8%), Positives = 37/162 (22%), Gaps = 18/162 (11%)
Query: 664 YVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGG-------GTADRCIRFWNTLTG 716
YV++ + L A +P + + GT + + T
Sbjct: 1 YVYDADAKKLLGQIDGGFGP--GFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTL 58
Query: 717 QPMQCVDTGSQVCNLAWSKHSSE-----LVSTHGYSQNQILVWKYPTLTQVAKLTGHSYR 771
+ ++ S +++ V +++
Sbjct: 59 DHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKM--LSEIDT 116
Query: 772 VLYLAMSPDGE-AIVTGAGD-ETLRFWNVFSKVRSQRESKSV 811
+ P G+ + L + ++R
Sbjct: 117 AACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDA 158
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 41.8 bits (98), Expect = 3e-04
Identities = 45/247 (18%), Positives = 80/247 (32%), Gaps = 27/247 (10%)
Query: 555 GNSVTSVAWNERGNLVAVGT--HHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSS 612
++ + + G V + + +V + R+ A G+ +
Sbjct: 175 DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTI 234
Query: 613 GSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQY-LASGGNDNRLYVWNLHSM 671
G ++ D R + + V GL SPD +Y +A+G + V + +
Sbjct: 235 GDSKVPVV--DGRGESEFTRYIPVPKN--PHGLNTSPDGKYFIANGKLSPTVSVIAIDKL 290
Query: 672 SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNL 731
+ + + I P GL R + TL SQVC
Sbjct: 291 --DDLFEDKIELRDTIVAEPEL-GLGPLHTTFDGRG-NAYTTLFID--------SQVC-- 336
Query: 732 AWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE 791
W+ + + +G N I K Q GH++ L + DG+ +V +
Sbjct: 337 KWN-IADAIKHYNGDRVNYIRQ-KLDVQYQ----PGHNHASLTESRDADGKWLVVLSKFS 390
Query: 792 TLRFWNV 798
RF V
Sbjct: 391 KDRFLPV 397
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/252 (9%), Positives = 66/252 (26%), Gaps = 22/252 (8%)
Query: 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NG 607
++S G + + ++ +G L + G + + + V H A A+ +G
Sbjct: 34 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG 93
Query: 608 DMLSSGSRDRMILQRDV-RTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666
+ D T N + + ++ L++ + +
Sbjct: 94 RLFVCYLGDFKSTGGIFAATENGDNLQDIIED---------------LSTAYCIDDMVFD 138
Query: 667 NLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS 726
+ + + + + + I N + + V +
Sbjct: 139 SKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV----TPIIQNISVANGIALSTDEKVLWVT 194
Query: 727 QVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVT 786
+ + + E + + + S LY+AM G +V
Sbjct: 195 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVF 254
Query: 787 GAGDETLRFWNV 798
+ +
Sbjct: 255 NKRGYPIGQILI 266
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 35.4 bits (80), Expect = 0.019
Identities = 24/203 (11%), Positives = 54/203 (26%), Gaps = 12/203 (5%)
Query: 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSG 613
+ ++A G + G + +Q+H V A NGD++++G
Sbjct: 26 VNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATG 85
Query: 614 SRDRMI-----------LQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNR 662
I ++ + P++ + S
Sbjct: 86 WNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 145
Query: 663 LYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV 722
+W H M A + + + + R G+P +
Sbjct: 146 GSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEP-EIF 204
Query: 723 DTGSQVCNLAWSKHSSELVSTHG 745
+ + + A+ + +TH
Sbjct: 205 VEQTNIDDFAFDVEGNLYGATHI 227
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 35.2 bits (79), Expect = 0.022
Identities = 33/237 (13%), Positives = 66/237 (27%), Gaps = 6/237 (2%)
Query: 559 TSVAWNERGNL-VAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDR 617
+ VA + GN+ V +G V + LA +G +
Sbjct: 17 SGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFN 76
Query: 618 MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY 677
+ N+Q+ G + Y + V L + S QT
Sbjct: 77 NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVY---VADRGNNRVVKLAAGSKTQTV 133
Query: 678 TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHS 737
+ + G + +R ++ Q + + +A +
Sbjct: 134 LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG 193
Query: 738 SELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLR 794
+ V+ H NQ++ + T L +A+ D V G++ +
Sbjct: 194 TVYVTEHNT--NQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 248
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 33.3 bits (74), Expect = 0.10
Identities = 29/225 (12%), Positives = 72/225 (32%), Gaps = 8/225 (3%)
Query: 588 KQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGL 645
+ + + AW +G L+ + + ++T + + R++ +
Sbjct: 29 YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAP 88
Query: 646 KWSPDNQYLA--SGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGT 703
+SPD LA + + ++ T+ + W P L +
Sbjct: 89 AFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQA 148
Query: 704 ADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVA 763
+ N G P + GSQ + S +V Q + K T
Sbjct: 149 GRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATGGV 207
Query: 764 KLTGHSYRVLYLAMSPDGEAIV---TGAGDETLRFWNVFSKVRSQ 805
++ ++ +++P+G ++ + L + + +++
Sbjct: 208 QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR 252
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 32.8 bits (73), Expect = 0.15
Identities = 18/243 (7%), Positives = 57/243 (23%), Gaps = 22/243 (9%)
Query: 580 QVWDVSVA-KQVHKLVGHTARVGALAWNGD-----MLSSGSRDRMILQRDVRTPNSQSER 633
+W+ + K+V + + + D + + +
Sbjct: 22 DLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK 81
Query: 634 RL-------VGHRQEVCGLKWSPDNQYLAS---GGNDNRLYVWNLHSMSPLQTYTEHLAA 683
R+ G R + PD + S + + + +L
Sbjct: 82 RITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGP 141
Query: 684 VKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQ-----VCNLAWSKHSS 738
I ++ + + T ++ + +++
Sbjct: 142 ATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVG 201
Query: 739 ELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
+ ++ + + ++ DG I+ G + +N
Sbjct: 202 HRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGS-IYIFNP 260
Query: 799 FSK 801
++
Sbjct: 261 DTE 263
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 29.3 bits (64), Expect = 2.2
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Query: 644 GLKWSPDNQYLASGGNDNRLYVWNLHSMS-----PLQTYTEHLAAVKAIAWSPHHHGLL 697
L+W D++YL +N + V+N + T+ E ++ + SP +L
Sbjct: 21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFIL 77
Score = 28.2 bits (61), Expect = 4.6
Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 13/92 (14%)
Query: 615 RDRMILQRDVRTPNSQ---SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLY------- 664
++ IL + NS + SPD Q++ N + +
Sbjct: 34 QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93
Query: 665 --VWNLHSMSPLQTYTEHLAAVKAIAWSPHHH 694
+++L+ L T + + WSP H
Sbjct: 94 YDIYDLNKRQ-LITEERIPNNTQWVTWSPVGH 124
>d1xiya1 c.47.1.10 (A:2-180) 1-Cys peroxiredoxin {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 179
Score = 28.1 bits (62), Expect = 3.1
Identities = 10/45 (22%), Positives = 17/45 (37%)
Query: 762 VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806
V K S + + DG + T + + + N F +R R
Sbjct: 92 VLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWR 136
>d2a65a1 f.54.1.1 (A:5-513) Na(+):neurotransmitter symporter
homologue LeuT {Aquifex aeolicus [TaxId: 63363]}
Length = 509
Score = 28.2 bits (62), Expect = 4.1
Identities = 13/144 (9%), Positives = 37/144 (25%), Gaps = 17/144 (11%)
Query: 4 PCIIPLPLVPILAFSLYWTNILLPIIVHIVLHVTSRVFIYW-KLPSNRTYSAYWVYLPNW 62
P I L++ + + + + + +L +R ++ W +
Sbjct: 324 PAIFSQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDELKLSRKHAVLWTAAIVF 383
Query: 63 KVGLPTLCINTL--AFSLYWTNILLPIIVHILLHVTSRVFIYWKLPSNR---------TY 111
+ +N + I + L + +W +++
Sbjct: 384 FSAHLVMFLNKSLDEMDFWAGTIGVVFFGLTEL-----IIFFWIFGADKAWEEINRGGII 438
Query: 112 SAYWVYLPNWKVGLPTLCINTLLF 135
+Y + P L+
Sbjct: 439 KVPRIYYYVMRYITPAFLAVLLVV 462
>d1iu4a_ d.3.1.8 (A:) Microbial transglutaminase
{Streptoverticillium mobaraense [TaxId: 35621]}
Length = 331
Score = 27.8 bits (61), Expect = 5.1
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 15/78 (19%)
Query: 347 DENTAPPLDLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPDNRTCSVVPKK 406
D+ PP + D M YR + E + YI KWQ +S D R
Sbjct: 3 DDRVTPPAEPLDRMPDPYRPSYGRAETVVNNYI-----RKWQQVYSHR-DGR-------- 48
Query: 407 TREVSGETSRDGLAYTCL 424
++ E R+ L+Y C+
Sbjct: 49 -KQQMTEEQREWLSYGCV 65
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 27.7 bits (60), Expect = 5.4
Identities = 21/255 (8%), Positives = 71/255 (27%), Gaps = 12/255 (4%)
Query: 552 SADG--NSVTSVAWNERGNLVAVGTHHGYVQVWD-----VSVAKQVHKLVGHTARVGALA 604
+G + VA N + +++ T++ +Q++D + K +A
Sbjct: 17 VMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVA 76
Query: 605 WNGDM--LSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNR 662
+ + R + + Q G+ + + R
Sbjct: 77 VVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMR 136
Query: 663 LYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV 722
+ +++ + + + S + + + +
Sbjct: 137 VIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGE 196
Query: 723 DTGSQVCNLAWSKHSSELVSTHGYSQNQILVW-KYPTLTQVAKLTGHSYRVLYLAMSPDG 781
+ + + + L++ ++ + ++ + L + + +A+ DG
Sbjct: 197 GITNYPIGVGINSNGEILIAD-NHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDG 255
Query: 782 EAIVTGAGDETLRFW 796
++ D L +
Sbjct: 256 SVVLAS-KDYRLYIY 269
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.134 0.427
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,070,297
Number of extensions: 141890
Number of successful extensions: 583
Number of sequences better than 10.0: 1
Number of HSP's gapped: 401
Number of HSP's successfully gapped: 150
Length of query: 819
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 726
Effective length of database: 1,130,706
Effective search space: 820892556
Effective search space used: 820892556
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.5 bits)